Query 000351
Match_columns 1623
No_of_seqs 848 out of 6461
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:26:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000351.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000351hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 4E-249 9E-254 2396.0 146.3 1241 226-1475 122-1375(1381)
2 PLN03130 ABC transporter C fam 100.0 1E-236 2E-241 2417.0 180.8 1618 1-1623 1-1622(1622)
3 PLN03232 ABC transporter C fam 100.0 5E-214 1E-218 2195.2 175.3 1479 1-1486 1-1482(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 6E-204 1E-208 2097.3 176.3 1427 16-1476 8-1521(1522)
5 TIGR01271 CFTR_protein cystic 100.0 2E-189 4E-194 1945.4 153.1 1242 226-1480 3-1457(1490)
6 PTZ00243 ABC transporter; Prov 100.0 1E-180 2E-185 1857.9 153.8 1249 225-1482 58-1553(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 9E-144 2E-148 1371.8 114.8 1150 299-1475 23-1225(1228)
8 PTZ00265 multidrug resistance 100.0 5E-133 1E-137 1371.7 141.5 1172 291-1474 50-1464(1466)
9 KOG0058 Peptide exporter, ABC 100.0 3.3E-87 7.1E-92 812.5 59.6 561 904-1475 137-704 (716)
10 COG2274 SunT ABC-type bacterio 100.0 2.3E-79 4.9E-84 778.7 66.2 549 916-1474 154-707 (709)
11 COG1132 MdlB ABC-type multidru 100.0 4.9E-76 1.1E-80 756.5 67.1 546 918-1476 16-565 (567)
12 PRK11174 cysteine/glutathione 100.0 2.2E-74 4.8E-79 745.4 69.0 564 904-1475 12-584 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 8.7E-74 1.9E-78 749.9 66.6 543 917-1472 162-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.9E-73 6.2E-78 746.0 69.8 544 917-1474 137-684 (686)
15 PRK10790 putative multidrug tr 100.0 2E-72 4.3E-77 727.2 70.4 546 917-1475 24-575 (592)
16 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.9E-73 1.9E-77 744.7 67.9 560 902-1472 142-709 (710)
17 TIGR01193 bacteriocin_ABC ABC- 100.0 1.1E-72 2.3E-77 743.1 67.9 557 902-1473 144-707 (708)
18 KOG0055 Multidrug/pheromone ex 100.0 2.5E-74 5.5E-79 735.8 48.6 513 953-1476 70-589 (1228)
19 PRK11176 lipid transporter ATP 100.0 1.5E-71 3.4E-76 718.4 68.8 542 922-1474 31-578 (582)
20 PRK11160 cysteine/glutathione 100.0 2.2E-71 4.8E-76 712.1 67.4 503 960-1473 66-572 (574)
21 TIGR03375 type_I_sec_LssB type 100.0 1.8E-71 3.8E-76 729.9 68.0 547 904-1463 137-689 (694)
22 KOG0058 Peptide exporter, ABC 100.0 5.3E-71 1.1E-75 671.2 64.2 546 294-841 140-705 (716)
23 KOG0056 Heavy metal exporter H 100.0 1.8E-73 3.9E-78 649.3 38.6 494 967-1474 272-773 (790)
24 COG4987 CydC ABC-type transpor 100.0 3.4E-71 7.5E-76 649.9 57.8 499 963-1473 67-571 (573)
25 COG4988 CydD ABC-type transpor 100.0 8.8E-71 1.9E-75 659.4 62.2 508 955-1475 41-555 (559)
26 TIGR02203 MsbA_lipidA lipid A 100.0 5.4E-70 1.2E-74 703.3 68.9 546 917-1473 15-566 (571)
27 TIGR01846 type_I_sec_HlyB type 100.0 6.6E-70 1.4E-74 714.4 69.1 560 902-1474 127-691 (694)
28 PRK11174 cysteine/glutathione 100.0 5.1E-69 1.1E-73 695.4 74.6 542 292-839 13-583 (588)
29 COG2274 SunT ABC-type bacterio 100.0 1.5E-68 3.3E-73 679.7 73.2 545 290-838 143-706 (709)
30 PRK13657 cyclic beta-1,2-gluca 100.0 7.9E-69 1.7E-73 692.7 71.0 548 917-1475 20-570 (588)
31 KOG0057 Mitochondrial Fe/S clu 100.0 1E-69 2.2E-74 637.5 55.9 507 954-1474 74-585 (591)
32 TIGR02868 CydC thiol reductant 100.0 4.1E-69 8.8E-74 687.8 62.6 507 920-1434 17-529 (529)
33 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.9E-67 6.3E-72 689.2 75.9 543 290-838 125-683 (686)
34 TIGR02204 MsbA_rel ABC transpo 100.0 7.1E-68 1.5E-72 683.9 68.7 548 919-1474 21-574 (576)
35 TIGR01192 chvA glucan exporter 100.0 1.8E-67 3.9E-72 676.7 70.1 546 917-1475 20-570 (585)
36 PRK10789 putative multidrug tr 100.0 9.5E-68 2.1E-72 678.4 65.0 508 956-1474 38-549 (569)
37 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.8E-67 1.9E-71 687.7 74.5 539 293-837 146-709 (710)
38 TIGR00958 3a01208 Conjugate Tr 100.0 1.9E-66 4.2E-71 680.6 74.4 537 296-836 156-710 (711)
39 TIGR02857 CydD thiol reductant 100.0 2.9E-67 6.3E-72 670.7 63.6 515 921-1446 8-529 (529)
40 COG1123 ATPase components of v 100.0 4.2E-68 9.1E-73 640.4 47.4 463 613-1472 4-529 (539)
41 TIGR03375 type_I_sec_LssB type 100.0 9.7E-66 2.1E-70 675.7 73.9 533 292-829 138-689 (694)
42 PRK10261 glutathione transport 100.0 4.4E-68 9.5E-73 684.9 49.5 483 612-1469 10-560 (623)
43 TIGR01193 bacteriocin_ABC ABC- 100.0 2.1E-65 4.5E-70 673.9 75.0 539 294-838 149-707 (708)
44 PRK11176 lipid transporter ATP 100.0 5.1E-65 1.1E-69 657.8 75.1 544 293-839 17-578 (582)
45 TIGR02203 MsbA_lipidA lipid A 100.0 1.3E-64 2.8E-69 653.3 74.9 543 293-838 6-566 (571)
46 COG4988 CydD ABC-type transpor 100.0 1.4E-64 2.9E-69 606.1 68.5 527 305-840 4-555 (559)
47 COG5265 ATM1 ABC-type transpor 100.0 2E-67 4.3E-72 598.8 39.7 488 976-1473 4-496 (497)
48 PTZ00265 multidrug resistance 100.0 1.2E-65 2.7E-70 706.0 65.2 568 898-1476 43-729 (1466)
49 TIGR01257 rim_protein retinal- 100.0 5.4E-65 1.2E-69 693.2 70.2 219 1236-1466 1935-2163(2272)
50 TIGR01842 type_I_sec_PrtD type 100.0 6.6E-65 1.4E-69 649.8 66.1 524 921-1462 11-542 (544)
51 PRK15134 microcin C ABC transp 100.0 4.4E-67 9.5E-72 667.2 45.6 450 613-1464 4-517 (529)
52 PRK10790 putative multidrug tr 100.0 1.2E-63 2.7E-68 645.3 76.9 540 294-840 16-575 (592)
53 TIGR03269 met_CoM_red_A2 methy 100.0 7E-67 1.5E-71 664.5 43.1 439 615-1462 1-517 (520)
54 PRK13549 xylose transporter AT 100.0 1.1E-66 2.5E-71 659.9 44.8 444 613-1461 4-493 (506)
55 PRK09700 D-allose transporter 100.0 1.1E-66 2.3E-71 661.4 43.1 442 613-1459 4-495 (510)
56 TIGR02204 MsbA_rel ABC transpo 100.0 2.8E-63 6E-68 641.2 74.8 545 292-838 9-573 (576)
57 PRK11160 cysteine/glutathione 100.0 3.6E-63 7.7E-68 636.2 74.1 539 295-838 10-572 (574)
58 TIGR01846 type_I_sec_HlyB type 100.0 6.7E-63 1.5E-67 648.2 76.3 544 292-839 130-691 (694)
59 PRK15064 ABC transporter ATP-b 100.0 1.5E-65 3.3E-70 653.2 49.7 201 1238-1463 319-526 (530)
60 PRK13657 cyclic beta-1,2-gluca 100.0 9.4E-63 2E-67 636.2 74.9 539 295-840 13-570 (588)
61 PRK10762 D-ribose transporter 100.0 8.9E-66 1.9E-70 651.0 44.7 435 614-1460 4-482 (501)
62 PRK15439 autoinducer 2 ABC tra 100.0 1.5E-65 3.2E-70 649.3 46.4 450 613-1462 10-492 (510)
63 COG1132 MdlB ABC-type multidru 100.0 1.8E-62 3.8E-67 631.0 73.5 535 299-840 13-564 (567)
64 TIGR02633 xylG D-xylose ABC tr 100.0 2.2E-65 4.7E-70 648.3 44.6 441 615-1459 2-489 (500)
65 PRK11288 araG L-arabinose tran 100.0 1.8E-65 3.8E-70 648.3 43.4 439 613-1461 3-484 (501)
66 TIGR02868 CydC thiol reductant 100.0 1E-62 2.2E-67 628.9 69.2 501 295-800 7-529 (529)
67 PRK10789 putative multidrug tr 100.0 2.1E-62 4.6E-67 629.0 71.9 527 311-840 5-550 (569)
68 TIGR01842 type_I_sec_PrtD type 100.0 2.8E-62 6.1E-67 625.6 70.3 522 298-828 3-542 (544)
69 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.2E-62 2.5E-67 629.0 63.6 520 918-1454 20-551 (555)
70 TIGR00956 3a01205 Pleiotropic 100.0 5.7E-64 1.2E-68 689.7 55.1 248 1198-1459 718-990 (1394)
71 TIGR01192 chvA glucan exporter 100.0 3.9E-61 8.4E-66 618.2 76.2 539 295-840 13-570 (585)
72 PRK10982 galactose/methyl gala 100.0 1.7E-64 3.7E-69 638.3 43.5 435 617-1460 1-478 (491)
73 PRK10636 putative ABC transpor 100.0 1.5E-63 3.2E-68 643.1 52.2 200 1238-1462 312-517 (638)
74 PRK10938 putative molybdenum t 100.0 1.6E-64 3.5E-69 638.8 42.4 438 614-1455 3-485 (490)
75 PRK11819 putative ABC transpor 100.0 2.4E-63 5.3E-68 634.9 53.5 200 1237-1462 323-533 (556)
76 COG4987 CydC ABC-type transpor 100.0 2.5E-61 5.4E-66 566.8 63.4 541 292-837 8-570 (573)
77 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.8E-63 1E-67 632.2 52.7 476 614-1461 4-530 (552)
78 TIGR02857 CydD thiol reductant 100.0 4.4E-61 9.6E-66 613.8 69.3 510 300-812 2-529 (529)
79 PRK11147 ABC transporter ATPas 100.0 3.9E-62 8.4E-67 631.7 54.1 200 1238-1462 319-528 (635)
80 COG4172 ABC-type uncharacteriz 100.0 2.3E-62 5E-67 552.2 41.3 452 613-1470 5-524 (534)
81 COG0488 Uup ATPase components 100.0 1E-61 2.2E-66 599.3 49.0 483 614-1463 3-526 (530)
82 KOG0057 Mitochondrial Fe/S clu 100.0 8.2E-60 1.8E-64 554.0 59.1 531 304-839 33-585 (591)
83 TIGR00957 MRP_assoc_pro multi 100.0 6.6E-59 1.4E-63 647.2 73.1 545 290-839 953-1519(1522)
84 PLN03232 ABC transporter C fam 100.0 1.7E-59 3.6E-64 652.3 65.8 474 979-1476 366-841 (1495)
85 PRK10522 multidrug transporter 100.0 3.9E-59 8.5E-64 596.6 63.6 471 964-1459 58-536 (547)
86 PLN03130 ABC transporter C fam 100.0 2E-59 4.3E-64 650.7 65.2 472 979-1475 366-840 (1622)
87 PLN03073 ABC transporter F fam 100.0 2.5E-60 5.5E-65 613.2 52.0 200 1237-1461 507-713 (718)
88 COG4618 ArpD ABC-type protease 100.0 4.6E-58 9.9E-63 533.5 55.3 530 289-829 11-561 (580)
89 PTZ00243 ABC transporter; Prov 100.0 1.4E-56 3.1E-61 621.7 73.3 469 370-841 1027-1547(1560)
90 KOG0056 Heavy metal exporter H 100.0 5.6E-59 1.2E-63 530.9 40.2 523 310-840 224-774 (790)
91 PLN03140 ABC transporter G fam 100.0 4.9E-58 1.1E-62 627.4 56.2 211 1238-1458 867-1106(1470)
92 COG4618 ArpD ABC-type protease 100.0 4.3E-57 9.4E-62 525.3 48.4 482 962-1463 71-561 (580)
93 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.5E-55 3.2E-60 563.7 65.9 512 295-820 11-551 (555)
94 PRK13409 putative ATPase RIL; 100.0 1.9E-58 4.1E-63 586.6 37.9 191 1238-1456 340-536 (590)
95 TIGR01271 CFTR_protein cystic 100.0 3.5E-54 7.6E-59 598.0 74.9 472 365-842 949-1454(1490)
96 PRK10522 multidrug transporter 100.0 2.3E-53 5E-58 543.5 65.5 508 291-820 3-530 (547)
97 COG1129 MglA ABC-type sugar tr 100.0 5.3E-55 1.1E-59 524.1 41.5 437 613-1457 7-485 (500)
98 TIGR00954 3a01203 Peroxysomal 100.0 8.9E-54 1.9E-58 554.1 55.2 510 917-1447 97-652 (659)
99 KOG0054 Multidrug resistance-a 100.0 5E-52 1.1E-56 544.8 60.3 487 965-1474 253-742 (1381)
100 TIGR00954 3a01203 Peroxysomal 100.0 5.5E-51 1.2E-55 528.1 61.6 503 302-814 97-653 (659)
101 COG3845 ABC-type uncharacteriz 100.0 3.4E-52 7.4E-57 487.5 37.5 440 613-1459 3-489 (501)
102 COG5265 ATM1 ABC-type transpor 100.0 3.2E-51 7E-56 466.5 40.1 461 373-837 14-495 (497)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.7E-52 8E-57 482.8 28.8 242 1237-1480 1-242 (275)
104 KOG0927 Predicted transporter 100.0 1.3E-48 2.9E-53 457.0 27.8 196 1238-1457 389-591 (614)
105 PRK14257 phosphate ABC transpo 100.0 6E-48 1.3E-52 458.9 27.4 256 1203-1465 36-316 (329)
106 COG1126 GlnQ ABC-type polar am 100.0 4.6E-47 9.9E-52 401.6 21.0 215 1238-1465 2-228 (240)
107 KOG0062 ATPase component of AB 100.0 2.3E-45 5E-50 427.8 28.1 195 1237-1454 361-560 (582)
108 COG1135 AbcC ABC-type metal io 100.0 7.3E-46 1.6E-50 411.4 20.4 217 1239-1466 2-235 (339)
109 cd03288 ABCC_SUR2 The SUR doma 100.0 5.1E-44 1.1E-48 414.2 28.4 239 1235-1473 16-254 (257)
110 COG1125 OpuBA ABC-type proline 100.0 4.9E-45 1.1E-49 392.3 18.1 219 1239-1470 2-233 (309)
111 COG1117 PstB ABC-type phosphat 100.0 7.1E-45 1.5E-49 382.4 18.1 219 1238-1465 7-240 (253)
112 cd03252 ABCC_Hemolysin The ABC 100.0 2.9E-43 6.2E-48 403.6 27.7 233 1239-1472 1-234 (237)
113 cd03244 ABCC_MRP_domain2 Domai 100.0 3.6E-43 7.8E-48 398.5 26.4 221 1237-1457 1-221 (221)
114 PRK14257 phosphate ABC transpo 100.0 4.6E-43 1E-47 417.1 24.6 265 549-829 22-314 (329)
115 COG1126 GlnQ ABC-type polar am 100.0 6.5E-43 1.4E-47 370.2 20.6 202 614-830 2-227 (240)
116 COG1120 FepC ABC-type cobalami 100.0 7.3E-43 1.6E-47 390.7 21.3 213 1238-1463 2-229 (258)
117 cd03254 ABCC_Glucan_exporter_l 100.0 5E-42 1.1E-46 391.4 26.5 226 1237-1463 1-227 (229)
118 cd03251 ABCC_MsbA MsbA is an e 100.0 6.3E-42 1.4E-46 391.9 26.5 226 1239-1464 1-227 (234)
119 KOG0065 Pleiotropic drug resis 100.0 3.5E-41 7.5E-46 430.6 33.9 199 1251-1459 802-1018(1391)
120 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.6E-42 2.1E-46 382.7 25.4 207 1233-1457 1-207 (207)
121 COG1127 Ttg2A ABC-type transpo 100.0 3.7E-42 8.1E-47 369.9 20.8 217 1238-1467 8-240 (263)
122 TIGR02314 ABC_MetN D-methionin 100.0 3.9E-42 8.5E-47 409.5 23.1 220 1239-1469 2-237 (343)
123 cd03253 ABCC_ATM1_transporter 100.0 2E-41 4.4E-46 388.2 27.1 231 1239-1471 1-232 (236)
124 COG1124 DppF ABC-type dipeptid 100.0 6.8E-42 1.5E-46 370.4 21.6 221 1238-1469 3-238 (252)
125 COG3839 MalK ABC-type sugar tr 100.0 5.5E-42 1.2E-46 397.7 22.1 217 1238-1469 3-230 (338)
126 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.3E-42 1.4E-46 380.9 20.8 209 1238-1463 4-228 (254)
127 cd03245 ABCC_bacteriocin_expor 100.0 3.7E-41 7.9E-46 381.8 25.7 219 1237-1455 1-220 (220)
128 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.9E-41 8.4E-46 386.2 25.9 225 1239-1463 1-227 (238)
129 PRK13631 cbiO cobalt transport 100.0 3.2E-41 7E-46 400.2 24.9 221 1236-1463 19-266 (320)
130 COG3638 ABC-type phosphate/pho 100.0 1.9E-41 4.2E-46 363.4 19.5 212 1238-1461 3-236 (258)
131 cd03261 ABC_Org_Solvent_Resist 100.0 3.4E-41 7.4E-46 385.9 22.1 212 1239-1463 1-227 (235)
132 cd03260 ABC_PstB_phosphate_tra 100.0 3E-41 6.6E-46 384.3 21.4 211 1239-1460 1-227 (227)
133 COG1122 CbiO ABC-type cobalt t 100.0 3.3E-41 7.1E-46 378.5 20.9 215 1238-1464 3-230 (235)
134 COG2884 FtsE Predicted ATPase 100.0 1.7E-41 3.7E-46 350.9 16.9 207 1239-1457 2-221 (223)
135 PRK14250 phosphate ABC transpo 100.0 1.7E-40 3.8E-45 381.1 26.1 220 1238-1469 3-228 (241)
136 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.4E-40 5.2E-45 384.2 26.4 225 614-842 2-239 (275)
137 PRK14269 phosphate ABC transpo 100.0 1.7E-40 3.8E-45 382.4 24.2 218 1238-1464 2-232 (246)
138 COG3842 PotA ABC-type spermidi 100.0 5.2E-41 1.1E-45 391.6 19.7 218 1238-1470 5-234 (352)
139 PRK11650 ugpC glycerol-3-phosp 100.0 1.8E-40 4E-45 398.5 24.9 217 1238-1468 3-230 (356)
140 PRK11432 fbpC ferric transport 100.0 1.4E-40 3E-45 398.4 23.6 217 1238-1469 6-233 (351)
141 COG1136 SalX ABC-type antimicr 100.0 2.3E-40 5E-45 363.7 23.3 204 1239-1452 2-221 (226)
142 cd03248 ABCC_TAP TAP, the Tran 100.0 2.6E-40 5.6E-45 376.4 23.7 216 1236-1451 9-226 (226)
143 PRK11153 metN DL-methionine tr 100.0 1.6E-40 3.5E-45 398.7 23.0 220 1239-1469 2-237 (343)
144 PRK13650 cbiO cobalt transport 100.0 2.1E-40 4.5E-45 388.0 23.0 215 1238-1463 4-230 (279)
145 COG1116 TauB ABC-type nitrate/ 100.0 1.6E-40 3.4E-45 364.1 19.5 197 1238-1452 3-212 (248)
146 TIGR03265 PhnT2 putative 2-ami 100.0 2E-40 4.3E-45 397.8 22.2 217 1238-1469 4-231 (353)
147 PRK10744 pstB phosphate transp 100.0 6.2E-40 1.4E-44 380.9 25.4 220 1236-1464 11-246 (260)
148 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-40 4.9E-45 339.1 19.0 210 1239-1465 2-222 (231)
149 PRK13647 cbiO cobalt transport 100.0 3.1E-40 6.6E-45 385.6 22.8 212 1238-1461 4-226 (274)
150 PRK14273 phosphate ABC transpo 100.0 6.2E-40 1.3E-44 379.9 24.8 220 1238-1466 7-242 (254)
151 cd03263 ABC_subfamily_A The AB 100.0 3.1E-40 6.7E-45 374.3 21.7 210 1239-1460 1-219 (220)
152 PRK13637 cbiO cobalt transport 100.0 4.8E-40 1E-44 386.3 23.8 216 1239-1463 3-235 (287)
153 PRK14242 phosphate transporter 100.0 6E-40 1.3E-44 379.8 24.1 218 1238-1464 6-239 (253)
154 TIGR00972 3a0107s01c2 phosphat 100.0 8E-40 1.7E-44 377.3 24.9 219 1239-1466 2-236 (247)
155 cd03296 ABC_CysA_sulfate_impor 100.0 6.1E-40 1.3E-44 376.4 23.8 211 1239-1464 3-228 (239)
156 cd03219 ABC_Mj1267_LivG_branch 100.0 4.3E-40 9.3E-45 377.2 22.4 221 1239-1463 1-233 (236)
157 TIGR01186 proV glycine betaine 100.0 2.2E-40 4.8E-45 396.3 20.7 206 1253-1469 6-226 (363)
158 cd03256 ABC_PhnC_transporter A 100.0 5E-40 1.1E-44 377.9 22.6 211 1239-1461 1-233 (241)
159 cd03224 ABC_TM1139_LivF_branch 100.0 4E-40 8.6E-45 374.0 21.4 216 1239-1462 1-221 (222)
160 PRK13635 cbiO cobalt transport 100.0 5.9E-40 1.3E-44 383.9 23.5 215 1238-1463 5-230 (279)
161 TIGR00960 3a0501s02 Type II (G 100.0 3.3E-40 7.2E-45 372.8 20.4 202 1239-1451 2-216 (216)
162 PRK10851 sulfate/thiosulfate t 100.0 6.6E-40 1.4E-44 393.3 24.1 216 1238-1468 2-232 (353)
163 PRK13537 nodulation ABC transp 100.0 4.5E-40 9.8E-45 389.1 22.3 213 1237-1463 6-228 (306)
164 PRK14259 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 380.1 25.2 220 1236-1464 11-255 (269)
165 TIGR03258 PhnT 2-aminoethylpho 100.0 4.5E-40 9.8E-45 395.1 22.1 219 1236-1469 3-235 (362)
166 PRK14235 phosphate transporter 100.0 1.1E-39 2.4E-44 379.9 24.8 221 1235-1464 16-253 (267)
167 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.1E-40 1.5E-44 376.6 22.8 214 1239-1464 1-227 (242)
168 TIGR02315 ABC_phnC phosphonate 100.0 6.9E-40 1.5E-44 377.2 22.6 211 1239-1461 2-234 (243)
169 PRK14247 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 377.1 24.0 219 1238-1465 3-237 (250)
170 cd03259 ABC_Carb_Solutes_like 100.0 4.8E-40 1E-44 370.8 20.4 202 1239-1455 1-213 (213)
171 PRK13643 cbiO cobalt transport 100.0 7.8E-40 1.7E-44 384.7 23.0 214 1239-1462 2-233 (288)
172 COG1116 TauB ABC-type nitrate/ 100.0 6.3E-40 1.4E-44 359.3 20.6 190 614-818 3-212 (248)
173 PRK14267 phosphate ABC transpo 100.0 9.3E-40 2E-44 378.2 23.2 218 1238-1464 4-239 (253)
174 PRK13646 cbiO cobalt transport 100.0 1.4E-39 3E-44 382.5 24.8 218 1239-1463 3-236 (286)
175 cd03258 ABC_MetN_methionine_tr 100.0 7.7E-40 1.7E-44 374.3 22.1 214 1239-1463 2-231 (233)
176 PRK09536 btuD corrinoid ABC tr 100.0 7.8E-40 1.7E-44 396.1 23.1 213 1238-1463 3-229 (402)
177 PRK09452 potA putrescine/sperm 100.0 1.1E-39 2.3E-44 393.1 24.1 216 1238-1468 14-240 (375)
178 PRK11000 maltose/maltodextrin 100.0 9.7E-40 2.1E-44 395.0 23.0 216 1238-1468 3-229 (369)
179 cd03250 ABCC_MRP_domain1 Domai 100.0 1.6E-39 3.6E-44 363.8 23.0 199 1239-1450 1-204 (204)
180 PRK13636 cbiO cobalt transport 100.0 1.3E-39 2.7E-44 382.2 23.1 213 1238-1462 5-231 (283)
181 COG4615 PvdE ABC-type sideroph 100.0 3.8E-37 8.3E-42 346.8 41.5 472 956-1454 50-529 (546)
182 cd03265 ABC_DrrA DrrA is the A 100.0 1.6E-39 3.5E-44 368.3 22.2 208 1239-1460 1-219 (220)
183 PRK13632 cbiO cobalt transport 100.0 2.4E-39 5.3E-44 377.9 24.3 215 1238-1463 7-232 (271)
184 COG1135 AbcC ABC-type metal io 100.0 7.4E-40 1.6E-44 363.6 18.9 206 614-830 1-233 (339)
185 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.9E-39 4.2E-44 371.6 22.6 215 1239-1463 2-222 (236)
186 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-39 2.4E-44 380.2 20.8 214 1240-1466 26-254 (269)
187 PRK14274 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 374.9 24.5 219 1238-1465 12-246 (259)
188 PRK14240 phosphate transporter 100.0 3.3E-39 7.1E-44 373.0 24.4 219 1237-1464 2-236 (250)
189 PRK15079 oligopeptide ABC tran 100.0 2.8E-39 6E-44 385.0 24.5 223 1238-1470 8-259 (331)
190 PRK14268 phosphate ABC transpo 100.0 2.3E-39 5E-44 375.7 23.0 220 1238-1466 12-246 (258)
191 TIGR03005 ectoine_ehuA ectoine 100.0 2.6E-39 5.6E-44 374.2 23.4 214 1239-1465 1-239 (252)
192 PRK14239 phosphate transporter 100.0 2.8E-39 6E-44 374.1 23.6 219 1238-1465 5-239 (252)
193 PRK13651 cobalt transporter AT 100.0 2.1E-39 4.6E-44 382.5 23.0 215 1239-1463 3-255 (305)
194 PRK14251 phosphate ABC transpo 100.0 2.4E-39 5.1E-44 374.4 22.9 219 1238-1465 4-238 (251)
195 cd03266 ABC_NatA_sodium_export 100.0 1.6E-39 3.5E-44 367.9 21.0 205 1239-1455 2-218 (218)
196 PRK14237 phosphate transporter 100.0 3.8E-39 8.2E-44 375.4 24.7 219 1237-1464 19-253 (267)
197 PRK14245 phosphate ABC transpo 100.0 2.3E-39 5E-44 374.2 22.5 219 1238-1465 3-237 (250)
198 cd03264 ABC_drug_resistance_li 100.0 1.6E-39 3.6E-44 365.8 20.6 202 1239-1455 1-211 (211)
199 PRK13634 cbiO cobalt transport 100.0 3.4E-39 7.3E-44 379.7 24.1 215 1239-1463 3-236 (290)
200 PRK14244 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 375.7 21.1 219 1239-1466 6-241 (251)
201 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-39 4.4E-44 364.3 21.3 202 1239-1455 1-208 (208)
202 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.1E-38 2.5E-43 371.5 28.3 211 1236-1463 37-248 (282)
203 PRK14256 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 372.2 24.7 221 1236-1465 2-239 (252)
204 PRK13652 cbiO cobalt transport 100.0 3E-39 6.4E-44 378.1 23.4 213 1239-1463 4-228 (277)
205 PRK11629 lolD lipoprotein tran 100.0 2.9E-39 6.3E-44 369.3 22.9 208 1238-1456 5-228 (233)
206 cd03247 ABCC_cytochrome_bd The 100.0 2.4E-39 5.1E-44 354.4 21.2 178 1239-1455 1-178 (178)
207 TIGR03411 urea_trans_UrtD urea 100.0 3.3E-39 7.3E-44 371.2 23.4 219 1239-1462 3-231 (242)
208 cd03226 ABC_cobalt_CbiO_domain 100.0 1.8E-39 3.8E-44 363.8 20.6 198 1240-1452 1-205 (205)
209 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-39 2.8E-44 368.6 19.7 202 1239-1451 1-218 (218)
210 PRK14262 phosphate ABC transpo 100.0 3.5E-39 7.6E-44 372.8 23.6 218 1238-1464 3-236 (250)
211 PRK14248 phosphate ABC transpo 100.0 4.6E-39 1E-43 375.2 24.8 218 1238-1464 21-254 (268)
212 cd03218 ABC_YhbG The ABC trans 100.0 1.9E-39 4.1E-44 370.9 21.0 215 1239-1462 1-222 (232)
213 COG1125 OpuBA ABC-type proline 100.0 1.4E-39 3E-44 350.4 18.4 202 614-830 1-227 (309)
214 PRK11831 putative ABC transpor 100.0 4.7E-39 1E-43 375.1 24.6 214 1238-1464 7-235 (269)
215 PRK10619 histidine/lysine/argi 100.0 4.4E-39 9.6E-44 373.2 24.1 216 1236-1464 3-243 (257)
216 PRK13640 cbiO cobalt transport 100.0 5.3E-39 1.2E-43 376.7 24.9 216 1237-1463 4-233 (282)
217 PRK11308 dppF dipeptide transp 100.0 5.3E-39 1.1E-43 382.4 25.1 223 1238-1470 5-252 (327)
218 PRK10575 iron-hydroxamate tran 100.0 2.8E-39 6.1E-44 376.3 22.3 212 1238-1462 11-237 (265)
219 PRK14238 phosphate transporter 100.0 8.2E-39 1.8E-43 373.2 26.1 219 1238-1465 24-258 (271)
220 PRK10070 glycine betaine trans 100.0 3.4E-39 7.4E-44 390.3 23.6 204 1254-1468 42-260 (400)
221 PRK13644 cbiO cobalt transport 100.0 4.4E-39 9.5E-44 375.9 23.6 213 1239-1463 2-225 (274)
222 PRK11264 putative amino-acid A 100.0 9.5E-39 2.1E-43 369.2 26.1 217 1239-1464 4-235 (250)
223 COG1137 YhbG ABC-type (unclass 100.0 4E-40 8.7E-45 342.7 13.1 224 1237-1464 3-230 (243)
224 COG4555 NatA ABC-type Na+ tran 100.0 5.6E-40 1.2E-44 342.1 14.1 217 1239-1464 2-224 (245)
225 PRK14249 phosphate ABC transpo 100.0 7.6E-39 1.6E-43 370.1 25.0 218 1238-1464 4-237 (251)
226 PRK13642 cbiO cobalt transport 100.0 4.7E-39 1E-43 376.5 23.5 215 1238-1463 4-230 (277)
227 TIGR01288 nodI ATP-binding ABC 100.0 3.1E-39 6.8E-44 382.6 22.3 212 1238-1463 4-225 (303)
228 PRK11607 potG putrescine trans 100.0 3.8E-39 8.2E-44 389.1 23.3 218 1237-1469 18-246 (377)
229 PRK09493 glnQ glutamine ABC tr 100.0 5.1E-39 1.1E-43 369.1 23.2 217 1239-1464 2-227 (240)
230 PRK14243 phosphate transporter 100.0 9.3E-39 2E-43 371.5 25.6 218 1238-1464 10-250 (264)
231 cd03301 ABC_MalK_N The N-termi 100.0 2.7E-39 5.8E-44 364.7 20.2 202 1239-1455 1-213 (213)
232 PRK11022 dppD dipeptide transp 100.0 6.7E-39 1.5E-43 381.7 24.6 224 1239-1470 4-251 (326)
233 PRK13633 cobalt transporter AT 100.0 5.9E-39 1.3E-43 376.2 23.7 215 1238-1463 4-234 (280)
234 PRK14236 phosphate transporter 100.0 8.6E-39 1.9E-43 373.5 25.0 220 1236-1464 23-258 (272)
235 PRK13648 cbiO cobalt transport 100.0 4.4E-39 9.6E-44 375.4 22.5 215 1238-1463 7-232 (269)
236 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.6E-39 1.6E-43 356.3 23.2 202 613-830 3-229 (254)
237 TIGR02769 nickel_nikE nickel i 100.0 8.5E-39 1.8E-43 372.3 24.7 214 1239-1463 3-241 (265)
238 PRK13536 nodulation factor exp 100.0 3.7E-39 8E-44 384.9 22.2 212 1238-1463 41-262 (340)
239 PRK11124 artP arginine transpo 100.0 5.3E-39 1.1E-43 369.4 22.7 215 1239-1462 3-230 (242)
240 PRK14260 phosphate ABC transpo 100.0 6.1E-39 1.3E-43 372.4 23.4 219 1238-1465 7-246 (259)
241 PRK11231 fecE iron-dicitrate t 100.0 4.7E-39 1E-43 372.6 22.3 211 1239-1462 3-227 (255)
242 PRK14266 phosphate ABC transpo 100.0 7.3E-39 1.6E-43 370.1 23.8 220 1239-1467 4-239 (250)
243 TIGR03522 GldA_ABC_ATP gliding 100.0 5.1E-39 1.1E-43 380.1 22.9 211 1239-1463 3-222 (301)
244 TIGR03410 urea_trans_UrtE urea 100.0 3.2E-39 6.9E-44 368.5 20.4 211 1239-1461 1-220 (230)
245 PRK11614 livF leucine/isoleuci 100.0 6.3E-39 1.4E-43 367.6 23.0 217 1238-1462 5-226 (237)
246 COG1118 CysA ABC-type sulfate/ 100.0 2E-39 4.4E-44 358.9 18.0 217 1238-1469 2-234 (345)
247 TIGR02211 LolD_lipo_ex lipopro 100.0 6.7E-39 1.4E-43 363.6 22.7 203 1239-1452 2-220 (221)
248 PRK14270 phosphate ABC transpo 100.0 9.4E-39 2E-43 369.3 24.4 218 1238-1464 4-237 (251)
249 PRK10895 lipopolysaccharide AB 100.0 6.1E-39 1.3E-43 368.7 22.6 215 1239-1462 4-226 (241)
250 PRK10253 iron-enterobactin tra 100.0 5.8E-39 1.3E-43 373.6 22.7 213 1237-1462 6-233 (265)
251 PRK14254 phosphate ABC transpo 100.0 1.3E-38 2.8E-43 373.6 25.6 219 1237-1464 38-271 (285)
252 COG1131 CcmA ABC-type multidru 100.0 4E-39 8.8E-44 377.3 21.2 213 1238-1463 4-227 (293)
253 PRK14261 phosphate ABC transpo 100.0 9.8E-39 2.1E-43 369.6 24.2 218 1238-1464 6-239 (253)
254 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.2E-39 6.8E-44 365.9 19.6 204 1239-1458 1-219 (220)
255 PRK14252 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 371.6 24.4 222 1234-1464 12-251 (265)
256 cd03225 ABC_cobalt_CbiO_domain 100.0 3.6E-39 7.9E-44 363.1 19.8 200 1240-1450 1-211 (211)
257 COG1120 FepC ABC-type cobalami 100.0 6E-39 1.3E-43 359.3 21.1 201 614-829 2-229 (258)
258 PRK13649 cbiO cobalt transport 100.0 1.4E-38 3E-43 373.7 25.2 218 1239-1463 3-235 (280)
259 PRK13548 hmuV hemin importer A 100.0 1.4E-38 3E-43 368.8 24.6 211 1239-1462 3-230 (258)
260 TIGR02673 FtsE cell division A 100.0 4.2E-39 9.2E-44 363.4 19.7 200 1239-1450 2-214 (214)
261 PRK13641 cbiO cobalt transport 100.0 8.3E-39 1.8E-43 376.1 22.8 214 1238-1462 2-234 (287)
262 cd03292 ABC_FtsE_transporter F 100.0 5.5E-39 1.2E-43 362.5 20.4 201 1239-1451 1-214 (214)
263 PRK11247 ssuB aliphatic sulfon 100.0 1.2E-38 2.6E-43 367.7 23.2 203 1238-1458 12-219 (257)
264 cd03300 ABC_PotA_N PotA is an 100.0 6.6E-39 1.4E-43 366.1 20.9 210 1239-1463 1-221 (232)
265 cd03291 ABCC_CFTR1 The CFTR su 100.0 6.7E-38 1.5E-42 365.0 29.6 238 590-834 16-253 (282)
266 PRK13638 cbiO cobalt transport 100.0 9.6E-39 2.1E-43 373.1 22.5 212 1239-1463 2-226 (271)
267 PRK14241 phosphate transporter 100.0 1.3E-38 2.7E-43 369.6 23.4 218 1238-1464 4-244 (258)
268 PRK14271 phosphate ABC transpo 100.0 2.4E-38 5.3E-43 369.8 25.8 218 1238-1464 21-253 (276)
269 PRK13645 cbiO cobalt transport 100.0 9.4E-39 2E-43 376.4 22.4 221 1236-1463 4-241 (289)
270 COG1127 Ttg2A ABC-type transpo 100.0 1.7E-38 3.7E-43 341.7 22.2 211 612-837 6-245 (263)
271 PRK14253 phosphate ABC transpo 100.0 1.9E-38 4.1E-43 366.4 24.4 217 1238-1463 3-234 (249)
272 cd03290 ABCC_SUR1_N The SUR do 100.0 1.6E-38 3.4E-43 359.7 23.1 210 1240-1450 2-218 (218)
273 PRK09473 oppD oligopeptide tra 100.0 1.5E-38 3.3E-43 378.9 24.2 226 1238-1471 12-260 (330)
274 cd03257 ABC_NikE_OppD_transpor 100.0 9.1E-39 2E-43 364.4 21.2 211 1239-1455 2-228 (228)
275 TIGR00968 3a0106s01 sulfate AB 100.0 1.5E-38 3.2E-43 364.3 22.9 210 1239-1463 1-221 (237)
276 cd03246 ABCC_Protease_Secretio 100.0 1.3E-38 2.7E-43 346.9 21.3 172 1239-1451 1-173 (173)
277 PRK14263 phosphate ABC transpo 100.0 1.9E-38 4.1E-43 367.9 24.0 219 1238-1465 8-248 (261)
278 PRK14265 phosphate ABC transpo 100.0 2.5E-38 5.5E-43 369.5 25.2 218 1238-1464 20-260 (274)
279 COG4178 ABC-type uncharacteriz 100.0 1.4E-35 3.1E-40 362.9 50.2 498 927-1447 54-587 (604)
280 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.6E-38 3.4E-43 357.9 22.3 200 1239-1455 1-211 (211)
281 TIGR03873 F420-0_ABC_ATP propo 100.0 1.4E-38 3E-43 368.9 22.4 211 1239-1462 2-226 (256)
282 cd03235 ABC_Metallic_Cations A 100.0 7.2E-39 1.6E-43 361.2 19.5 197 1240-1455 1-213 (213)
283 PRK14275 phosphate ABC transpo 100.0 2E-38 4.3E-43 372.4 23.8 220 1237-1465 38-273 (286)
284 TIGR03415 ABC_choXWV_ATP choli 100.0 1.1E-38 2.4E-43 383.2 21.8 205 1254-1469 38-261 (382)
285 PRK14258 phosphate ABC transpo 100.0 2E-38 4.4E-43 368.2 23.5 221 1237-1466 6-249 (261)
286 PRK14272 phosphate ABC transpo 100.0 2.2E-38 4.7E-43 366.7 23.4 222 1238-1468 4-242 (252)
287 PRK10771 thiQ thiamine transpo 100.0 3.7E-38 8E-43 360.0 24.9 208 1239-1463 2-220 (232)
288 PRK10584 putative ABC transpor 100.0 1.9E-38 4E-43 361.7 22.4 206 1238-1454 6-227 (228)
289 PRK11300 livG leucine/isoleuci 100.0 2.2E-38 4.8E-43 367.3 23.3 219 1238-1462 5-243 (255)
290 PRK11701 phnK phosphonate C-P 100.0 4.3E-38 9.4E-43 365.2 25.4 223 1238-1469 6-248 (258)
291 COG0410 LivF ABC-type branched 100.0 2.3E-38 4.9E-43 341.0 21.2 219 1239-1464 4-228 (237)
292 TIGR01188 drrA daunorubicin re 100.0 1.1E-38 2.3E-43 377.8 20.4 203 1247-1463 2-214 (302)
293 PRK14264 phosphate ABC transpo 100.0 3.9E-38 8.4E-43 373.1 25.0 220 1235-1463 42-290 (305)
294 PRK15093 antimicrobial peptide 100.0 2.9E-38 6.3E-43 377.6 24.1 225 1238-1470 3-256 (330)
295 PRK13639 cbiO cobalt transport 100.0 2.1E-38 4.5E-43 370.6 22.3 213 1239-1463 2-227 (275)
296 cd03269 ABC_putative_ATPase Th 100.0 1.2E-38 2.6E-43 358.6 19.2 200 1239-1455 1-210 (210)
297 KOG0066 eIF2-interacting prote 100.0 1.8E-37 3.9E-42 350.2 28.5 198 1238-1459 586-788 (807)
298 PRK10908 cell division protein 100.0 4.4E-38 9.6E-43 357.0 23.7 203 1239-1453 2-217 (222)
299 PRK10247 putative ABC transpor 100.0 2.8E-38 6E-43 359.1 21.7 209 1238-1458 7-223 (225)
300 PRK14255 phosphate ABC transpo 100.0 4.3E-38 9.3E-43 364.1 23.6 219 1238-1465 5-239 (252)
301 PRK14246 phosphate ABC transpo 100.0 4.2E-38 9E-43 364.2 23.4 222 1238-1468 10-247 (257)
302 cd03262 ABC_HisP_GlnQ_permease 100.0 1.9E-38 4E-43 357.9 19.9 200 1239-1451 1-213 (213)
303 PRK15112 antimicrobial peptide 100.0 3.8E-38 8.1E-43 367.1 22.5 216 1238-1464 4-241 (267)
304 cd03252 ABCC_Hemolysin The ABC 100.0 1.3E-37 2.8E-42 356.8 26.3 219 615-836 1-233 (237)
305 PRK13547 hmuV hemin importer A 100.0 6.6E-38 1.4E-42 364.5 23.9 211 1239-1462 2-244 (272)
306 TIGR01978 sufC FeS assembly AT 100.0 3.1E-38 6.8E-43 363.5 21.0 210 1239-1461 1-233 (243)
307 COG1117 PstB ABC-type phosphat 100.0 1.1E-38 2.5E-43 335.7 14.9 207 613-830 6-239 (253)
308 COG1118 CysA ABC-type sulfate/ 100.0 2.6E-38 5.7E-43 350.1 18.5 202 614-830 2-229 (345)
309 cd03299 ABC_ModC_like Archeal 100.0 6.7E-38 1.5E-42 358.3 22.5 210 1239-1464 1-221 (235)
310 PRK09984 phosphonate/organopho 100.0 7.9E-38 1.7E-42 363.8 23.4 210 1238-1460 4-240 (262)
311 TIGR01277 thiQ thiamine ABC tr 100.0 6.1E-38 1.3E-42 353.5 21.6 201 1239-1456 1-212 (213)
312 cd03250 ABCC_MRP_domain1 Domai 100.0 1.1E-37 2.4E-42 349.1 23.5 201 615-816 1-204 (204)
313 PRK11144 modC molybdate transp 100.0 6.6E-38 1.4E-42 377.5 23.0 212 1239-1466 2-222 (352)
314 COG3839 MalK ABC-type sugar tr 100.0 5.6E-38 1.2E-42 364.4 21.5 202 614-830 3-225 (338)
315 COG4615 PvdE ABC-type sideroph 100.0 4.5E-35 9.8E-40 330.2 44.0 506 292-820 4-529 (546)
316 PRK10418 nikD nickel transport 100.0 1.3E-37 2.7E-42 360.3 24.0 216 1238-1466 4-234 (254)
317 COG3842 PotA ABC-type spermidi 100.0 3.2E-38 7E-43 368.2 19.0 203 613-830 4-228 (352)
318 PRK00349 uvrA excinuclease ABC 100.0 5.6E-37 1.2E-41 400.6 31.8 220 1238-1466 614-931 (943)
319 COG4178 ABC-type uncharacteriz 100.0 5.3E-34 1.1E-38 349.2 55.1 446 361-814 106-588 (604)
320 TIGR01257 rim_protein retinal- 100.0 3.8E-38 8.3E-43 431.2 20.8 220 1238-1469 928-1156(2272)
321 PRK11248 tauB taurine transpor 100.0 1E-37 2.2E-42 360.5 21.2 202 1239-1458 2-216 (255)
322 COG1245 Predicted ATPase, RNas 100.0 3.6E-37 7.8E-42 353.2 25.1 168 1256-1447 352-530 (591)
323 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.8E-37 1E-41 352.4 25.8 215 615-831 1-229 (238)
324 COG1122 CbiO ABC-type cobalt t 100.0 1.7E-37 3.8E-42 348.4 20.9 204 613-829 2-229 (235)
325 TIGR03740 galliderm_ABC gallid 100.0 2.2E-37 4.9E-42 351.5 21.9 204 1239-1459 1-210 (223)
326 COG1136 SalX ABC-type antimicr 100.0 3.6E-37 7.8E-42 338.5 22.7 192 615-818 2-221 (226)
327 TIGR02142 modC_ABC molybdenum 100.0 1.7E-37 3.8E-42 374.4 21.9 211 1243-1468 4-227 (354)
328 cd03254 ABCC_Glucan_exporter_l 100.0 6.9E-37 1.5E-41 349.1 25.4 211 614-828 2-226 (229)
329 cd03253 ABCC_ATM1_transporter 100.0 8.2E-37 1.8E-41 350.1 26.1 217 615-835 1-231 (236)
330 cd03251 ABCC_MsbA MsbA is an e 100.0 6.8E-37 1.5E-41 350.3 25.4 215 615-832 1-229 (234)
331 cd03228 ABCC_MRP_Like The MRP 100.0 2.8E-37 6E-42 335.8 21.0 171 1239-1450 1-171 (171)
332 cd03288 ABCC_SUR2 The SUR doma 100.0 9.3E-37 2E-41 353.5 26.8 223 612-837 17-253 (257)
333 COG0411 LivG ABC-type branched 100.0 9.9E-38 2.2E-42 338.6 17.3 220 1239-1464 5-241 (250)
334 cd03234 ABCG_White The White s 100.0 1.7E-37 3.6E-42 353.2 20.1 212 1239-1455 4-226 (226)
335 TIGR02323 CP_lyasePhnK phospho 100.0 2.7E-37 5.9E-42 357.7 22.2 223 1238-1469 3-245 (253)
336 PRK10419 nikE nickel transport 100.0 4.6E-37 1E-41 357.9 24.2 224 1239-1470 4-248 (268)
337 TIGR02982 heterocyst_DevA ABC 100.0 1.8E-37 3.8E-42 351.5 19.7 202 1239-1451 2-219 (220)
338 COG3840 ThiQ ABC-type thiamine 100.0 2.1E-37 4.6E-42 317.4 18.0 199 615-830 2-221 (231)
339 cd03230 ABC_DR_subfamily_A Thi 100.0 3.2E-37 6.8E-42 335.9 20.0 170 1239-1451 1-173 (173)
340 cd03229 ABC_Class3 This class 100.0 3.6E-37 7.9E-42 337.0 20.5 172 1239-1450 1-178 (178)
341 PRK09544 znuC high-affinity zi 100.0 5.6E-37 1.2E-41 353.1 22.5 208 1238-1472 4-217 (251)
342 cd03217 ABC_FeS_Assembly ABC-t 100.0 6.1E-37 1.3E-41 341.6 21.7 185 1239-1461 1-192 (200)
343 cd03244 ABCC_MRP_domain2 Domai 100.0 1.5E-36 3.2E-41 344.4 24.9 206 614-822 2-220 (221)
344 COG4175 ProV ABC-type proline/ 100.0 2.9E-37 6.4E-42 341.2 17.9 221 1238-1469 4-261 (386)
345 cd03297 ABC_ModC_molybdenum_tr 100.0 7E-37 1.5E-41 345.2 21.0 203 1240-1455 3-214 (214)
346 PRK15056 manganese/iron transp 100.0 9.5E-37 2.1E-41 356.2 22.5 209 1238-1462 6-230 (272)
347 cd03233 ABC_PDR_domain1 The pl 100.0 7.4E-37 1.6E-41 341.3 20.5 190 1238-1455 3-202 (202)
348 TIGR02314 ABC_MetN D-methionin 100.0 8.4E-37 1.8E-41 363.8 22.2 203 615-829 2-231 (343)
349 COG0444 DppD ABC-type dipeptid 100.0 1E-36 2.2E-41 345.0 21.0 227 1239-1473 2-254 (316)
350 cd03213 ABCG_EPDR ABCG transpo 100.0 8.7E-37 1.9E-41 338.5 19.8 182 1238-1455 3-194 (194)
351 PRK11650 ugpC glycerol-3-phosp 100.0 1.6E-36 3.5E-41 364.5 23.6 203 614-830 3-226 (356)
352 PRK13631 cbiO cobalt transport 100.0 2.8E-36 6E-41 358.1 24.7 210 610-830 17-267 (320)
353 cd03215 ABC_Carb_Monos_II This 100.0 8.8E-37 1.9E-41 335.2 18.9 172 1238-1451 4-182 (182)
354 cd03245 ABCC_bacteriocin_expor 100.0 4.5E-36 9.8E-41 340.2 25.2 205 614-821 2-220 (220)
355 cd03261 ABC_Org_Solvent_Resist 100.0 1.9E-36 4.1E-41 346.8 22.1 200 615-829 1-227 (235)
356 CHL00131 ycf16 sulfate ABC tra 100.0 1.9E-36 4.2E-41 350.4 22.2 211 1238-1460 7-239 (252)
357 COG2884 FtsE Predicted ATPase 100.0 9.2E-37 2E-41 315.9 17.3 195 614-821 1-219 (223)
358 TIGR03608 L_ocin_972_ABC putat 100.0 7.3E-37 1.6E-41 343.1 17.9 193 1241-1446 1-206 (206)
359 cd03214 ABC_Iron-Siderophores_ 100.0 1.2E-36 2.5E-41 333.7 18.7 177 1240-1455 1-180 (180)
360 COG3638 ABC-type phosphate/pho 100.0 1.4E-36 3.1E-41 326.0 18.7 201 613-827 2-236 (258)
361 cd03232 ABC_PDR_domain2 The pl 100.0 1.3E-36 2.8E-41 336.7 18.6 181 1238-1455 3-192 (192)
362 PRK11432 fbpC ferric transport 100.0 3.7E-36 7.9E-41 360.3 23.5 203 613-830 5-228 (351)
363 COG1124 DppF ABC-type dipeptid 100.0 5.8E-36 1.3E-40 324.5 22.4 205 613-829 2-232 (252)
364 cd03223 ABCD_peroxisomal_ALDP 100.0 2.9E-36 6.3E-41 325.8 20.1 164 1239-1450 1-164 (166)
365 PRK03695 vitamin B12-transport 100.0 3.4E-36 7.4E-41 346.8 22.0 205 1240-1462 2-222 (248)
366 PRK00635 excinuclease ABC subu 100.0 4.4E-35 9.5E-40 395.4 35.2 211 1238-1463 600-907 (1809)
367 TIGR02770 nickel_nikD nickel i 100.0 3.8E-36 8.2E-41 342.9 21.0 205 1255-1469 1-222 (230)
368 PRK09580 sufC cysteine desulfu 100.0 4.2E-36 9.1E-41 346.8 21.2 218 1239-1460 2-233 (248)
369 COG4559 ABC-type hemin transpo 100.0 4E-36 8.7E-41 315.6 18.9 212 1239-1463 2-231 (259)
370 PRK13650 cbiO cobalt transport 100.0 9.3E-36 2E-40 348.8 24.1 205 614-830 4-231 (279)
371 COG4619 ABC-type uncharacteriz 100.0 8.3E-37 1.8E-41 308.6 12.6 196 1247-1452 10-213 (223)
372 COG1123 ATPase components of v 100.0 5.4E-36 1.2E-40 362.4 21.9 227 1238-1473 5-255 (539)
373 PRK09452 potA putrescine/sperm 100.0 9.3E-36 2E-40 359.0 23.5 204 612-830 12-236 (375)
374 PRK13637 cbiO cobalt transport 100.0 9E-36 2E-40 350.1 22.8 206 614-829 2-235 (287)
375 cd03231 ABC_CcmA_heme_exporter 100.0 8.1E-36 1.8E-40 332.9 21.3 194 1239-1446 1-198 (201)
376 TIGR03265 PhnT2 putative 2-ami 100.0 7.6E-36 1.6E-40 358.3 22.6 203 613-830 3-226 (353)
377 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-35 2.7E-40 376.4 25.5 212 1238-1462 11-229 (510)
378 cd03267 ABC_NatA_like Similar 100.0 4.4E-36 9.6E-41 343.5 19.3 195 1253-1455 34-236 (236)
379 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-35 2.8E-40 340.7 23.1 200 614-828 2-226 (239)
380 PRK13643 cbiO cobalt transport 100.0 1.1E-35 2.4E-40 349.5 23.2 204 615-829 2-234 (288)
381 cd03216 ABC_Carb_Monos_I This 100.0 9.2E-36 2E-40 320.9 20.6 159 1239-1453 1-162 (163)
382 TIGR01186 proV glycine betaine 100.0 4.8E-36 1.1E-40 359.0 20.0 190 629-830 5-221 (363)
383 PRK13651 cobalt transporter AT 100.0 1.5E-35 3.2E-40 349.9 23.3 206 614-829 2-255 (305)
384 PRK13549 xylose transporter AT 100.0 9.3E-36 2E-40 377.9 23.2 215 1238-1461 5-231 (506)
385 cd03219 ABC_Mj1267_LivG_branch 100.0 1.1E-35 2.4E-40 340.8 21.4 199 615-828 1-232 (236)
386 PRK13647 cbiO cobalt transport 100.0 1.4E-35 3.1E-40 346.3 22.6 199 614-826 4-225 (274)
387 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-35 2.3E-40 338.8 21.0 197 615-825 1-226 (227)
388 PRK13634 cbiO cobalt transport 100.0 1.6E-35 3.5E-40 348.5 23.2 205 615-830 3-237 (290)
389 cd03290 ABCC_SUR1_N The SUR do 100.0 2.3E-35 4.9E-40 333.9 23.4 199 616-816 2-218 (218)
390 cd03259 ABC_Carb_Solutes_like 100.0 1E-35 2.2E-40 335.6 20.4 192 615-821 1-213 (213)
391 PRK09700 D-allose transporter 100.0 9.3E-36 2E-40 378.5 22.6 212 1238-1462 5-234 (510)
392 TIGR01184 ntrCD nitrate transp 100.0 4.9E-36 1.1E-40 341.7 17.9 190 1256-1461 1-203 (230)
393 PRK10851 sulfate/thiosulfate t 100.0 1.9E-35 4.1E-40 354.8 23.5 202 614-830 2-228 (353)
394 TIGR03258 PhnT 2-aminoethylpho 100.0 1.4E-35 3E-40 356.4 22.2 203 613-830 4-230 (362)
395 PRK11000 maltose/maltodextrin 100.0 1.6E-35 3.5E-40 358.3 22.9 201 614-829 3-224 (369)
396 cd03226 ABC_cobalt_CbiO_domain 100.0 1.4E-35 3.1E-40 332.3 20.7 189 616-818 1-205 (205)
397 PRK13538 cytochrome c biogenes 100.0 1.3E-35 2.8E-40 332.2 20.3 194 1239-1446 2-202 (204)
398 PRK10762 D-ribose transporter 100.0 1.5E-35 3.4E-40 375.4 23.3 215 1238-1461 4-229 (501)
399 PRK13537 nodulation ABC transp 100.0 2E-35 4.4E-40 349.5 22.7 202 613-829 6-228 (306)
400 PRK13646 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 346.9 22.7 205 614-829 2-236 (286)
401 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-35 2.5E-40 335.9 19.6 190 615-817 2-216 (216)
402 cd03265 ABC_DrrA DrrA is the A 100.0 1.5E-35 3.3E-40 335.7 20.6 197 615-826 1-219 (220)
403 PRK13635 cbiO cobalt transport 100.0 3.8E-35 8.2E-40 343.5 24.4 205 613-830 4-231 (279)
404 PRK11153 metN DL-methionine tr 100.0 2.2E-35 4.8E-40 354.4 22.7 203 615-829 2-231 (343)
405 PRK10938 putative molybdenum t 100.0 1.7E-35 3.8E-40 374.4 22.7 210 1239-1462 4-224 (490)
406 TIGR00630 uvra excinuclease AB 100.0 1.1E-34 2.5E-39 378.4 30.7 97 1364-1460 816-923 (924)
407 cd03293 ABC_NrtD_SsuB_transpor 100.0 2E-35 4.4E-40 334.8 20.7 197 615-823 1-218 (220)
408 cd03248 ABCC_TAP TAP, the Tran 100.0 4.6E-35 9.9E-40 333.4 23.7 204 612-817 9-226 (226)
409 PRK14250 phosphate ABC transpo 100.0 6.3E-35 1.4E-39 335.1 25.0 202 614-829 3-222 (241)
410 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.5E-35 1.4E-39 327.5 24.3 189 613-822 5-206 (207)
411 PRK11629 lolD lipoprotein tran 100.0 3.3E-35 7.2E-40 335.9 22.2 198 613-822 4-228 (233)
412 cd03268 ABC_BcrA_bacitracin_re 100.0 3.5E-35 7.6E-40 329.9 21.8 192 615-821 1-208 (208)
413 cd03256 ABC_PhnC_transporter A 100.0 3.3E-35 7.1E-40 338.0 22.0 199 615-827 1-233 (241)
414 TIGR02315 ABC_phnC phosphonate 100.0 4.1E-35 8.8E-40 337.6 22.6 198 615-826 2-233 (243)
415 PRK11247 ssuB aliphatic sulfon 100.0 5.5E-35 1.2E-39 337.3 23.6 197 613-824 11-219 (257)
416 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.1E-35 4.5E-40 334.3 19.7 191 615-817 1-218 (218)
417 PRK13644 cbiO cobalt transport 100.0 5.2E-35 1.1E-39 341.6 23.6 201 615-829 2-225 (274)
418 PRK10261 glutathione transport 100.0 1.7E-35 3.7E-40 382.4 21.5 223 1238-1468 12-264 (623)
419 PRK13543 cytochrome c biogenes 100.0 3.4E-35 7.4E-40 331.2 21.1 195 1238-1448 11-212 (214)
420 PRK13540 cytochrome c biogenes 100.0 2.4E-35 5.2E-40 329.0 19.6 193 1239-1445 2-198 (200)
421 cd03258 ABC_MetN_methionine_tr 100.0 4.6E-35 1E-39 334.9 22.1 202 615-828 2-230 (233)
422 PRK14242 phosphate transporter 100.0 4.8E-35 1E-39 338.9 22.4 205 613-829 5-238 (253)
423 PRK11607 potG putrescine trans 100.0 4.8E-35 1E-39 353.5 23.3 204 612-830 17-241 (377)
424 COG4608 AppF ABC-type oligopep 100.0 2.2E-35 4.8E-40 327.8 18.5 198 1238-1475 4-212 (268)
425 cd03235 ABC_Metallic_Cations A 100.0 4.2E-35 9E-40 330.6 20.8 188 617-820 2-212 (213)
426 TIGR01288 nodI ATP-binding ABC 100.0 5.6E-35 1.2E-39 346.3 22.8 201 613-828 3-224 (303)
427 cd03263 ABC_subfamily_A The AB 100.0 4.7E-35 1E-39 331.9 21.2 198 615-826 1-219 (220)
428 COG4598 HisP ABC-type histidin 100.0 9.9E-36 2.1E-40 303.3 13.9 216 1238-1466 6-245 (256)
429 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6E-35 1.3E-39 334.5 22.1 200 615-829 2-222 (236)
430 PRK13636 cbiO cobalt transport 100.0 7.5E-35 1.6E-39 341.9 23.4 204 613-830 4-233 (283)
431 cd03301 ABC_MalK_N The N-termi 100.0 4.1E-35 8.9E-40 330.7 20.3 192 615-821 1-213 (213)
432 PRK09536 btuD corrinoid ABC tr 100.0 6.6E-35 1.4E-39 353.3 23.5 201 614-829 3-229 (402)
433 PRK15134 microcin C ABC transp 100.0 6.5E-35 1.4E-39 372.1 24.3 219 1238-1464 5-248 (529)
434 cd03218 ABC_YhbG The ABC trans 100.0 7E-35 1.5E-39 333.2 22.1 199 615-828 1-222 (232)
435 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.1E-35 8.8E-40 341.8 20.4 199 616-829 26-251 (269)
436 PRK13536 nodulation factor exp 100.0 6E-35 1.3E-39 348.8 22.2 203 612-829 39-262 (340)
437 cd03224 ABC_TM1139_LivF_branch 100.0 7.4E-35 1.6E-39 330.8 21.8 199 615-827 1-220 (222)
438 PRK10982 galactose/methyl gala 100.0 3.7E-35 8.1E-40 371.3 21.5 212 1241-1461 1-222 (491)
439 PRK14269 phosphate ABC transpo 100.0 7.4E-35 1.6E-39 335.7 22.0 204 614-829 2-231 (246)
440 PRK13641 cbiO cobalt transport 100.0 9.8E-35 2.1E-39 341.6 23.4 205 614-829 2-235 (287)
441 PRK11288 araG L-arabinose tran 100.0 6.4E-35 1.4E-39 369.8 23.5 211 1238-1457 4-224 (501)
442 PRK00635 excinuclease ABC subu 100.0 4.1E-33 8.9E-38 376.4 42.1 95 1369-1463 1381-1484(1809)
443 PRK13640 cbiO cobalt transport 100.0 1E-34 2.3E-39 340.5 23.5 205 613-829 4-233 (282)
444 PRK14273 phosphate ABC transpo 100.0 1.2E-34 2.6E-39 335.7 23.6 205 613-829 6-239 (254)
445 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-34 2.3E-39 334.7 22.9 204 614-829 1-233 (247)
446 PRK13539 cytochrome c biogenes 100.0 7.6E-35 1.6E-39 326.7 21.0 193 1239-1448 3-200 (207)
447 TIGR02211 LolD_lipo_ex lipopro 100.0 8.3E-35 1.8E-39 330.1 21.2 192 615-818 2-220 (221)
448 cd03266 ABC_NatA_sodium_export 100.0 9.5E-35 2.1E-39 328.9 21.1 195 615-821 2-218 (218)
449 PRK13632 cbiO cobalt transport 100.0 2E-34 4.3E-39 336.6 24.4 204 613-829 6-232 (271)
450 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-34 2.9E-39 332.5 22.6 200 615-829 2-226 (240)
451 PRK10584 putative ABC transpor 100.0 1.4E-34 3.1E-39 329.7 22.6 196 613-820 5-227 (228)
452 PRK13633 cobalt transporter AT 100.0 2E-34 4.3E-39 338.0 24.3 205 613-829 3-234 (280)
453 cd03269 ABC_putative_ATPase Th 100.0 9E-35 2E-39 327.1 20.4 192 615-821 1-210 (210)
454 PRK13642 cbiO cobalt transport 100.0 1.9E-34 4.2E-39 337.5 24.0 205 614-830 4-231 (277)
455 PRK11831 putative ABC transpor 100.0 1.1E-34 2.4E-39 338.3 21.7 202 613-829 6-234 (269)
456 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-34 2.3E-39 368.2 23.2 214 1239-1461 2-229 (500)
457 cd03264 ABC_drug_resistance_li 100.0 9E-35 2E-39 327.4 20.0 190 615-821 1-211 (211)
458 TIGR01189 ccmA heme ABC export 100.0 6.8E-35 1.5E-39 324.9 18.8 192 1239-1445 1-197 (198)
459 PRK10619 histidine/lysine/argi 100.0 1.4E-34 3E-39 335.6 22.0 202 613-828 4-241 (257)
460 PRK10744 pstB phosphate transp 100.0 2.2E-34 4.8E-39 334.4 23.6 205 613-829 12-245 (260)
461 PRK13652 cbiO cobalt transport 100.0 2.5E-34 5.5E-39 336.6 24.2 202 614-829 3-228 (277)
462 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.2E-34 2.6E-39 333.3 20.9 202 615-828 1-225 (242)
463 PRK10575 iron-hydroxamate tran 100.0 2.1E-34 4.5E-39 335.4 23.2 202 612-828 9-237 (265)
464 PRK14248 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 336.1 23.3 207 611-829 18-253 (268)
465 TIGR02324 CP_lyasePhnL phospho 100.0 8.5E-35 1.9E-39 330.7 19.4 198 1239-1446 2-222 (224)
466 PRK11264 putative amino-acid A 100.0 1.5E-34 3.2E-39 334.3 21.6 201 614-829 3-234 (250)
467 PRK10070 glycine betaine trans 100.0 1.3E-34 2.9E-39 350.4 22.0 204 614-829 4-255 (400)
468 COG1131 CcmA ABC-type multidru 100.0 1.8E-34 4E-39 338.0 22.5 202 614-829 4-227 (293)
469 PRK13649 cbiO cobalt transport 100.0 1.9E-34 4.2E-39 338.6 22.7 205 614-829 2-235 (280)
470 PRK13645 cbiO cobalt transport 100.0 2.2E-34 4.8E-39 339.3 23.0 207 613-829 5-241 (289)
471 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-34 3.2E-39 347.5 21.8 188 630-829 37-255 (382)
472 PRK14235 phosphate transporter 100.0 2.2E-34 4.8E-39 335.4 22.7 205 612-828 17-251 (267)
473 cd03247 ABCC_cytochrome_bd The 100.0 2E-34 4.4E-39 315.5 21.0 166 615-821 1-178 (178)
474 TIGR02673 FtsE cell division A 100.0 1.1E-34 2.5E-39 327.3 19.6 188 615-816 2-214 (214)
475 PRK13638 cbiO cobalt transport 100.0 2.5E-34 5.4E-39 335.9 23.0 200 615-829 2-226 (271)
476 COG0410 LivF ABC-type branched 100.0 1.8E-34 4E-39 310.9 20.0 210 613-831 2-229 (237)
477 PRK11300 livG leucine/isoleuci 100.0 2.6E-34 5.5E-39 333.3 22.8 201 613-828 4-243 (255)
478 PRK13648 cbiO cobalt transport 100.0 3.3E-34 7.1E-39 334.5 23.8 204 613-829 6-232 (269)
479 PRK14245 phosphate ABC transpo 100.0 1.8E-34 4E-39 333.4 21.4 205 613-829 2-235 (250)
480 TIGR03410 urea_trans_UrtE urea 100.0 1.9E-34 4.2E-39 329.1 21.3 198 615-826 1-219 (230)
481 PRK13546 teichoic acids export 100.0 3E-34 6.5E-39 332.2 23.0 208 1238-1465 4-235 (264)
482 PRK11231 fecE iron-dicitrate t 100.0 2.8E-34 6.1E-39 332.7 22.8 200 614-828 2-227 (255)
483 PRK11124 artP arginine transpo 100.0 3.1E-34 6.7E-39 329.9 23.0 199 614-827 2-229 (242)
484 PRK14274 phosphate ABC transpo 100.0 2.8E-34 6E-39 333.5 22.8 205 613-829 11-244 (259)
485 PRK10247 putative ABC transpor 100.0 2.1E-34 4.6E-39 327.3 21.4 198 613-824 6-223 (225)
486 TIGR03411 urea_trans_UrtD urea 100.0 2.8E-34 6E-39 330.4 22.6 199 614-828 2-231 (242)
487 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.5E-34 5.5E-39 323.7 21.7 190 615-821 1-211 (211)
488 PRK13548 hmuV hemin importer A 100.0 4.5E-34 9.8E-39 331.1 24.4 200 614-828 2-230 (258)
489 PRK14259 phosphate ABC transpo 100.0 3.4E-34 7.3E-39 334.1 23.4 206 612-829 11-254 (269)
490 PRK14268 phosphate ABC transpo 100.0 2.2E-34 4.8E-39 334.0 21.5 206 612-829 10-243 (258)
491 cd03292 ABC_FtsE_transporter F 100.0 1.7E-34 3.7E-39 325.9 20.0 189 615-817 1-214 (214)
492 PRK14239 phosphate transporter 100.0 2.9E-34 6.4E-39 332.2 22.4 205 613-829 4-237 (252)
493 PRK13639 cbiO cobalt transport 100.0 3E-34 6.4E-39 335.6 22.6 201 615-829 2-227 (275)
494 PRK10895 lipopolysaccharide AB 100.0 3.7E-34 8E-39 329.1 22.9 200 614-828 3-226 (241)
495 TIGR03005 ectoine_ehuA ectoine 100.0 2.8E-34 6.1E-39 332.2 22.1 200 615-829 1-237 (252)
496 PRK14237 phosphate transporter 100.0 4E-34 8.7E-39 333.3 23.4 206 612-829 18-252 (267)
497 cd03225 ABC_cobalt_CbiO_domain 100.0 1.6E-34 3.5E-39 325.4 19.5 188 616-816 1-211 (211)
498 PRK11614 livF leucine/isoleuci 100.0 4.7E-34 1E-38 327.4 23.6 201 613-828 4-226 (237)
499 PRK09984 phosphonate/organopho 100.0 4.9E-34 1.1E-38 332.1 23.8 199 613-826 3-240 (262)
500 cd03223 ABCD_peroxisomal_ALDP 100.0 3E-34 6.4E-39 310.1 20.4 161 615-815 1-163 (166)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-249 Score=2395.96 Aligned_cols=1241 Identities=50% Similarity=0.846 Sum_probs=1154.1
Q ss_pred CCCCccCch--hhHHHHHhHHHHHHhhccCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC--CChhHHHHHHHHHHH
Q 000351 226 ICPERQANI--FSRIFFSWMNPLMKKGYEKFITEKDVWKLDTWDQTETLNNQFQKCWAKESQR--PKPWLLRALNSSLGG 301 (1623)
Q Consensus 226 ~~pe~~a~~--~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~l~~~~~~~w~~~~~~--~~~~L~~al~~~~~~ 301 (1623)
+.|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++..+ ++|+++++++++|++
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 344555555 9999999999999999999999999999999999999999999999998533 478999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 302 RFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQD-GPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAV 380 (1623)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i 380 (1623)
+++..++++++.+...|++|.+++.++++++++ .+.+.||.++++++++.++.+++.++|++..+++|+++|+++.++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999986 3477899999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000351 381 FRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFI 460 (1623)
Q Consensus 381 ~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~~~~ 460 (1623)
|+|+|+++...+++.+.|+++|+|++|++++.+++.++|.+|..|+|+++++++||.++|+++++|++++++++|++.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 461 ISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVV 540 (1623)
Q Consensus 461 ~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~~~~ 540 (1623)
+++++++|++.|+.+|+|++.++|+|+|||+||||+||+.|.++|++.|++|++.++|..++.+++.+++.++|++++++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--CCCCCCCcEEE
Q 000351 541 SFGMFT-LLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP--PLTSGLPAISI 617 (1623)
Q Consensus 541 ~f~~~~-~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~--~~~~~~~~i~~ 617 (1623)
+|++|+ ..++.+++..+|+++++|++++.|+.++|..+.++.++.+|++|+++||..+|....... +..+.+..|++
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i 521 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEI 521 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEE
Confidence 999999 678899999999999999999999999999999999999999999999999887543332 33445568999
Q ss_pred EeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcCcEEEEccCcccCcccHHH
Q 000351 618 RNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRD 697 (1623)
Q Consensus 618 ~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~~iay~~Q~~~l~~~Tv~e 697 (1623)
+|++|+|++++..+.|+||||+|++|+++||||++||||||||++|+||+++.+| .+.++|.+|||||+|||+|+||||
T Consensus 522 ~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG-~v~v~gsiaYv~Q~pWI~ngTvre 600 (1381)
T KOG0054|consen 522 KNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSG-SVAVNGSVAYVPQQPWIQNGTVRE 600 (1381)
T ss_pred eeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccc-eEEEcCeEEEeccccHhhCCcHHH
Confidence 9999999975556799999999999999999999999999999999999999999 888999999999999999999999
Q ss_pred HHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHH
Q 000351 698 NILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGR 777 (1623)
Q Consensus 698 nI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~ 777 (1623)
||+||.|||+++|++|+++|+|++|++.+|.||+|+|||+|.||||||||||+||||+|+|+||||||||+||||+|+++
T Consensus 601 NILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~ 680 (1381)
T KOG0054|consen 601 NILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGK 680 (1381)
T ss_pred hhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhhcchhhhhcccccCcccc
Q 000351 778 QVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVD 857 (1623)
Q Consensus 778 ~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (1623)
|||++|+.+.+++||+|+|||++++|++||+|++|+||+|.++|+|+|+++.+..+.++..+........ .. .+ ...
T Consensus 681 ~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~-~~-~~-~~~ 757 (1381)
T KOG0054|consen 681 HIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEE-AS-EK-DLE 757 (1381)
T ss_pred HHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccc-cc-cc-ccc
Confidence 9999999999999999999999999999999999999999999999999998888888743222111110 00 00 000
Q ss_pred cCCCCCCCC-CCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 000351 858 NKTSKPAAN-GVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSS 936 (1623)
Q Consensus 858 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 936 (1623)
......... ..........+.....+..+.+..++|+++.|.++|++|+.|+++.+|++.+++++++.++.+++..+.+
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~ 837 (1381)
T KOG0054|consen 758 SGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASN 837 (1381)
T ss_pred ccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0000000000011112222455677888999999999999999998888888888999999999999999
Q ss_pred chhhhhcccCccCC---CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhH
Q 000351 937 TWLSYWTDQSSLKT---HGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRI 1013 (1623)
Q Consensus 937 ~wl~~w~~~~~~~~---~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~i 1013 (1623)
+||++|+++..... .+..+|+++|+++++++.++.+++++++...+.++|++||++|+++++|+||+|||+||+|||
T Consensus 838 ~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRI 917 (1381)
T KOG0054|consen 838 YWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRI 917 (1381)
T ss_pred HHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccch
Confidence 99999998875443 467889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH
Q 000351 1014 INRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVY 1093 (1623)
Q Consensus 1014 lnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~ 1093 (1623)
+||||+|++.+|..+|..+..++..++.+++++++++++.|+++++++|+.+++|.++++|.+++|+++|+++.+|||+|
T Consensus 918 LNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~ 997 (1381)
T KOG0054|consen 918 LNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIY 997 (1381)
T ss_pred hhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccchhhH
Q 000351 1094 AQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGS-AENQEAF 1172 (1623)
Q Consensus 1094 ~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~-~~~~~~~ 1172 (1623)
+||+|++.|+.|||||+++++|.+++.+++|.++++.|....++||+++|+|+++++++++++.+++..... .+
T Consensus 998 sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~----- 1072 (1381)
T KOG0054|consen 998 SHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLIS----- 1072 (1381)
T ss_pred HhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999987766 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCC
Q 000351 1173 ASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL 1252 (1623)
Q Consensus 1173 ~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~ 1252 (1623)
+|.+|++++|++++++.++++++..+++|+.|+||||+.+|.++|+|.|...+...||++||.+|.|+|+|++++|+|+.
T Consensus 1073 ~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~l 1152 (1381)
T KOG0054|consen 1073 PGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNL 1152 (1381)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999766666666899999999999999999999999
Q ss_pred CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHh
Q 000351 1253 PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRF 1332 (1623)
Q Consensus 1253 ~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~ 1332 (1623)
|+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||+++++|||||+||+||||+
T Consensus 1153 p~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~ 1232 (1381)
T KOG0054|consen 1153 PLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRF 1232 (1381)
T ss_pred cchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHH
Q 000351 1333 NLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDA 1412 (1623)
Q Consensus 1333 NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~ 1412 (1623)
||||+++++|++||+|||+|+|+++|+++|.|||+.|.|+|.|||.||||++||||||||++|||+||||||++|++||.
T Consensus 1233 NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~ 1312 (1381)
T KOG0054|consen 1233 NLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDA 1312 (1381)
T ss_pred ccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHh
Q 000351 1413 LIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1413 ~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~ 1475 (1623)
.||++||+.|++||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.+.
T Consensus 1313 lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1313 LIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEA 1375 (1381)
T ss_pred HHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999776543
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1e-236 Score=2417.04 Aligned_cols=1618 Identities=83% Similarity=1.302 Sum_probs=1381.6
Q ss_pred CCccccccccCCCCCCCccccccccCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHhcccccccccchhhhHHHHHHHH
Q 000351 1 MAFKPLDWYCRPVANGVWTKVVDNAFGAYTPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFL 80 (1623)
Q Consensus 1 ~~~~~~~~~c~~~~~~~~~~~~~~~fg~~~~c~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (1623)
|||+|++++|+|+++++|++.++++|+|++|||+++++.++|++++++++++++|.+.++.+...+..+..+....+.++
T Consensus 1 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1622)
T PLN03130 1 MGFEPLDWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALL 80 (1622)
T ss_pred CcchhhhhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHH
Confidence 99999999999988789999888889999999999999999999999999999998854222222221112223333344
Q ss_pred HHHHhhHHHHHHHHHHhhcccCCCCCCccHH---HHHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 000351 81 AAYCTAEPLFQLIMGISALDLDGQSGLAPFE---ILSLIIEALCWCSMLIMIFVETKVYIREFRWFVRFGVIYTLVGDAV 157 (1623)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1623)
.++++...++..+..++..+.++.....+.. ++..++..++++++..+.+.+|.++.+++.. +.+.|++..+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 157 (1622)
T PLN03130 81 AAYCTAEPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVR---FAVIYVLVGDAV 157 (1622)
T ss_pred HHHHHHHHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcce---eehhHHHhhHHH
Confidence 4444444444333322222222221112222 4444555555555555566667766665542 222222332333
Q ss_pred HHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccccccccccccCCCCCCCCCCccCchhhH
Q 000351 158 MVNLILSVKNFYNSSVLYLYMSEVIVQALFGLLLLVYVPELDPYPGYTPMRTELVDDAEYEELPGGEQICPERQANIFSR 237 (1623)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~ 237 (1623)
.....+.....+.......+...+++...++++++++++...+++.|++...+...+.+|++.+..++.+||+++|+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~ 237 (1622)
T PLN03130 158 MLNLVLSVKEYYSSFVLYLYISEVAAQVLFGILLLVYFPNLDPYPGYTPIGSESVDDYEYEELPGGEQICPERHANIFSR 237 (1622)
T ss_pred HHHHHHHHHHHHhccccceehhHHHHHHHHHHHHHHHHhcCCCCcccccccccccccccccCCcccCCCCcccccCHHHH
Confidence 33333333333222111123333444444555554557766666666543333222335666667778899999999999
Q ss_pred HHHHhHHHHHHhhccCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 238 IFFSWMNPLMKKGYEKFITEKDVWKLDTWDQTETLNNQFQKCWAKESQRPKPWLLRALNSSLGGRFWWGGFWKIGNDLSQ 317 (1623)
Q Consensus 238 ~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~l~~~~~~~w~~~~~~~~~~L~~al~~~~~~~~~~~~~~~l~~~~~~ 317 (1623)
++|+|++|++++|||++|+.+|||+++++++++.+.++|++.|+++.++++|+|+++++++|++.++.+++++++..++.
T Consensus 238 ~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1622)
T PLN03130 238 IFFGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEELKKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQ 317 (1622)
T ss_pred HHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987777899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCCH
Q 000351 318 FVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFAS 397 (1623)
Q Consensus 318 ~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~ 397 (1623)
+++|++++.+++++.+++..+.++.++++++++.++.+++.++|.+...+++.++|+.++..+|+|+++++....++.++
T Consensus 318 ~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 318 FVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999765545667877777777777777888888888999999999999999999999999999889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 398 GKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDK 477 (1623)
Q Consensus 398 g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 477 (1623)
|+++|+|++|++++++++..+|.+|..|++++++++++|..+|+++++|++++++++|++.++.+++++.++++++.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHH
Q 000351 478 RIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARA 557 (1623)
Q Consensus 478 r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~ 557 (1623)
|.+.++|+++|||+||+||||+.+.+++++.|++|++..++..++..+..+++...|.++.+++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999888888888888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCccccce
Q 000351 558 FTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNIN 637 (1623)
Q Consensus 558 ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~is 637 (1623)
|+++++++.+..|+..+|..+..+.++.+|++||++|++.++....+.++.......|+++|++|+|+++.++++|+|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~~~~~~~~~I~~~nvsf~y~~~~~~~vL~~in 637 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNPPLEPGLPAISIKNGYFSWDSKAERPTLSNIN 637 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCCcccCCCCceEEEeeEEEccCCCCCceeecee
Confidence 99999999999999999999999999999999999999876543222111112234699999999998544578999999
Q ss_pred eEecCCcEEEEEcCCCCChhHHHHHHcCCccCCC-CCeEEEcCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHH
Q 000351 638 LDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS-DASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDV 716 (1623)
Q Consensus 638 l~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~-g~~~~~~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~ 716 (1623)
|+|++|++++|+||+|||||||+++|+|+++|++ | .+.++++||||+|+||||++||||||+||+++|+++|++++++
T Consensus 638 l~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG-~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a 716 (1622)
T PLN03130 638 LDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDA-SVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDV 716 (1622)
T ss_pred EEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCc-eEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999 6 7788999999999999999999999999999999999999999
Q ss_pred hCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEE
Q 000351 717 TSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLV 796 (1623)
Q Consensus 717 ~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilv 796 (1623)
|+|.+|++.+|+||+|.|||+|.+|||||||||+||||+|++||||||||||||||++++++|+++++++.++|+|+|+|
T Consensus 717 ~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlV 796 (1622)
T PLN03130 717 TALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLV 796 (1622)
T ss_pred hCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887889999999
Q ss_pred cCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCccc
Q 000351 797 TNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEA 876 (1623)
Q Consensus 797 tH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (1623)
||++++++.||+|++|++|+|+++|++++++++.+.|.++.......++..++..+. ........+.........+...
T Consensus 797 TH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 875 (1622)
T PLN03130 797 TNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEE-EDDQTSSKPVANGNANNLKKDS 875 (1622)
T ss_pred ECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccccccccc-cccccccccccccccccccccc
Confidence 999999999999999999999999999999988888888776543221111100000 0000000000000000000000
Q ss_pred ccccccccchhhhhhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHH
Q 000351 877 SDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFY 956 (1623)
Q Consensus 877 ~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~ 956 (1623)
...+..+..+....++|+++.|.+++++|++|+++.|+++.++++++++++.+++..++++|+++|++..........+|
T Consensus 876 ~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~ 955 (1622)
T PLN03130 876 SSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFY 955 (1622)
T ss_pred cccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHH
Confidence 00000111122345677888999999999999999888777777777888889999999999999998654333445678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHH
Q 000351 957 NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFM 1036 (1623)
Q Consensus 957 ~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~ 1036 (1623)
+++|++++++..++.+++.+++...+.++++++|++++++++++|++||+++|+|+|+|||++|++.+|..++..+..++
T Consensus 956 ~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~ 1035 (1622)
T PLN03130 956 NLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFL 1035 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHH
Q 000351 1037 GQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMA 1116 (1623)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~ 1116 (1623)
..++.+++.++++++.+++..++++|++++++.++.+|.+++|++++.+..+++|+++++.|+++|+.|||+|+++++|.
T Consensus 1036 ~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~ 1115 (1622)
T PLN03130 1036 GQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMA 1115 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHH
Confidence 99999999999999999988888899988888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1117 DINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRL 1196 (1623)
Q Consensus 1117 ~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~ 1196 (1623)
+.+.+..|.+++..+.....++|+++++++++++++++++.+.+...+.......+++.+|++++|++.+...+.++.+.
T Consensus 1116 ~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~ 1195 (1622)
T PLN03130 1116 EINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRL 1195 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888777776666554433333445788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCC
Q 000351 1197 ASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTG 1276 (1623)
Q Consensus 1197 ~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsG 1276 (1623)
+..+++.+.|++|+.++.+.|+|.+...+...+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||
T Consensus 1196 ~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSG 1275 (1622)
T PLN03130 1196 ASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTG 1275 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCC
Confidence 99999999999999999998888654334445567899999999999999998777789999999999999999999999
Q ss_pred CChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHH
Q 000351 1277 AGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKD 1356 (1623)
Q Consensus 1277 SGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~ 1356 (1623)
||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||+++++++
T Consensus 1276 SGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~ 1355 (1622)
T PLN03130 1276 AGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKD 1355 (1622)
T ss_pred CCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchh
Q 000351 1357 AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNT 1436 (1623)
Q Consensus 1357 ~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~t 1436 (1623)
+|+++|.||||.++|+|.+|||||||||||||||+|+|+|||||||||+||.+||+.||++|++.+++||+|+||||++|
T Consensus 1356 ~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~t 1435 (1622)
T PLN03130 1356 VIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNT 1435 (1622)
T ss_pred HHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHhhhhhHHHHHHHhhcccchhhhhhhhhhcccchhhhhcchhH
Q 000351 1437 IIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLVLGGEAENKLREENKQIDGQRRWLASSRWA 1516 (1623)
Q Consensus 1437 i~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1516 (1623)
+++||||+||++|+|+|+|+|+||+++++|.|++|++.+|..+.+.++..+.+.+.+....++.+..+.+.++.+..+|+
T Consensus 1436 I~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1515 (1622)
T PLN03130 1436 IIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAANAQYLRSLVFGGDEDRLAREESKALDGQRKWLASSRWA 1515 (1622)
T ss_pred HHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChhhhHHHHHHHhccccccccccchhcccchhhHHHhhhcc
Confidence 99999999999999999999999999878999999999998877777766533222223334445577888888888999
Q ss_pred HHHHHhhhhhcccccccchhhhhhhhhhhhhhchhhhhhhhhhcccchhhHHHHhhccCccCchhhHHHHHHHHhhhhhh
Q 000351 1517 AAAQYALAVSLTSSHNDLQRLEVEDQNNILKKTKDAVVTLQGVLEGKHDKEIEESLNQHEVSTDGWWSALYRMIEGLSVM 1596 (1623)
Q Consensus 1517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1596 (1623)
..++++.+.++++++++++..++++...+++++|+++.++..+..+.|++.+.+.+.++++++|+||+++|+|+||+++|
T Consensus 1516 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1595 (1622)
T PLN03130 1516 AAAQFALAVSLTSSQNDLQSLEIEDENSILEKTKDAVITLQSVLEGKHDKEIDESLNQRQVPRDGWWSSLYRMVEGLAVM 1595 (1622)
T ss_pred cchhhhhhhhccccccchhccccCCchhhhhhhhhhHhHHHHhhccccccccchhhhhccCCcccchHHHHHHHhccccc
Confidence 99999999999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhccccCCCCCCCcccccccCCC
Q 000351 1597 SRLARNRLHQSDYDLEERSIDWDHVEM 1623 (1623)
Q Consensus 1597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1623 (1623)
+|++|||.||.+|++|++++|||++||
T Consensus 1596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1622 (1622)
T PLN03130 1596 SRLARNRMQQSDHNFEGKSIDWDNVEM 1622 (1622)
T ss_pred hhHHHHhhccCcccccCCcCChhhhcC
Confidence 999999999999999999999999997
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.8e-214 Score=2195.23 Aligned_cols=1479 Identities=71% Similarity=1.155 Sum_probs=1243.9
Q ss_pred CCccccccccCCCCCCCccccccccCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHhcccccccccchhhhHHHHHHHH
Q 000351 1 MAFKPLDWYCRPVANGVWTKVVDNAFGAYTPCATDSLVVSVSHLILMGLCFYRIWLIKKDFKVQRFCLKSKLYNYMLGFL 80 (1623)
Q Consensus 1 ~~~~~~~~~c~~~~~~~~~~~~~~~fg~~~~c~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (1623)
|||+.++++|+|++.|+|++.++.+|+|++|||+++++.++|++++++++++++|.+.++++...+..+..+....+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1495)
T PLN03232 1 MGFEALNWYCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGIL 80 (1495)
T ss_pred CchhHHHhhcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHH
Confidence 89999999999877458999887789999999999999999999999999999998852111111111111222222233
Q ss_pred HHHHhhHHHHHHHHHHhhcccCCCC--CCccHH-HHHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHH
Q 000351 81 AAYCTAEPLFQLIMGISALDLDGQS--GLAPFE-ILSLIIEALCWCSMLIMIFVETKVYIREFRWFVRFGVIYTLVGDAV 157 (1623)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (1623)
.++++...++..+..++..+.+... ...+.. ++..++..++++++..+.+.||.++.+++.....+|++. .+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 157 (1495)
T PLN03232 81 ACYCVVEPVLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLV---ADAV 157 (1495)
T ss_pred HHHHHHHHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhh---hhHH
Confidence 3333333333222211111112211 112222 555666666666666677777888777665322222222 1212
Q ss_pred HHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccccccccccccCCCCCCCCCCccCchhhH
Q 000351 158 MVNLILSVKNFYNSSVLYLYMSEVIVQALFGLLLLVYVPELDPYPGYTPMRTELVDDAEYEELPGGEQICPERQANIFSR 237 (1623)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~ 237 (1623)
.....+.....+.......+...+++...+++++++.+|...+++.+.+...+...+.+|+..|..++.+||+++|+|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~ 237 (1495)
T PLN03232 158 LLDLVLPLKNSINRTALYLCISSRCCQALFGILLLVYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSR 237 (1495)
T ss_pred HHHHHHHHHHHHhccccceehhHHHHHHHHHHHHHHhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHH
Confidence 22222222222211000112222333334444444556655555444322222222234556666778899999999999
Q ss_pred HHHHhHHHHHHhhccCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 238 IFFSWMNPLMKKGYEKFITEKDVWKLDTWDQTETLNNQFQKCWAKESQRPKPWLLRALNSSLGGRFWWGGFWKIGNDLSQ 317 (1623)
Q Consensus 238 ~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~l~~~~~~~w~~~~~~~~~~L~~al~~~~~~~~~~~~~~~l~~~~~~ 317 (1623)
++|+|++|++++|||++|+.+|||+|+++++++.+.++|++.|+++.++++|+|+++++++|++.++.+++++++.+++.
T Consensus 238 ~~f~w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1495)
T PLN03232 238 IYFSWMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEESRRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQ 317 (1495)
T ss_pred HHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887667899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCCH
Q 000351 318 FVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFAS 397 (1623)
Q Consensus 318 ~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~ 397 (1623)
+++|++++.+++++++++..+.++.++++++++.++.+++.++|.+...+++.++|..++..+|+|.++++....++.++
T Consensus 318 ~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~ 397 (1495)
T PLN03232 318 FVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFAS 397 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999765555668888888888888889999999999999999999999999999999999998888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 398 GKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDK 477 (1623)
Q Consensus 398 g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 477 (1623)
|+++|+|++|++++++.+..+|.+|..|++++++++++|..+|++++++++++++++|++.++++++++.++++++.+|+
T Consensus 398 G~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~ 477 (1495)
T PLN03232 398 GKVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDK 477 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999899999999999999999999999999999999998899999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHH
Q 000351 478 RIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARA 557 (1623)
Q Consensus 478 r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~ 557 (1623)
|.+.++|+++|||+||+|+||+.+.+++++.|++|++..++......+..++....|.++++++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~v 557 (1495)
T PLN03232 478 RVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARA 557 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999988888887777778888888999999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCccccce
Q 000351 558 FTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNIN 637 (1623)
Q Consensus 558 ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~is 637 (1623)
|+++++++.+..|+..+|..+..+.++.+|++||++|++.++......+........|+++|++|+|+++.++++|+|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~~~~~~~~~I~~~~vsF~y~~~~~~~vL~~in 637 (1495)
T PLN03232 558 FTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNPPLQPGAPAISIKNGYFSWDSKTSKPTLSDIN 637 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccCCcCCCCCcEEEEeeEEEcCCCCCCceeeeeE
Confidence 99999999999999999999999999999999999999876542211111112234699999999998544578999999
Q ss_pred eEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHh
Q 000351 638 LDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVT 717 (1623)
Q Consensus 638 l~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~ 717 (1623)
|+|++|++++|+||+|||||||+++|+|+++|++|+....+++||||+|+||||++||||||+||+++++++|++++++|
T Consensus 638 l~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~ 717 (1495)
T PLN03232 638 LEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVT 717 (1495)
T ss_pred EEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999998788889999999999999999999999999999999999999999
Q ss_pred CchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEc
Q 000351 718 SLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVT 797 (1623)
Q Consensus 718 ~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvt 797 (1623)
+|.+|++.+|+||+|.|||+|.+|||||||||+||||+|++||||||||||||||++++++|+++++.+.++++|+|+||
T Consensus 718 ~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvT 797 (1495)
T PLN03232 718 ALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVT 797 (1495)
T ss_pred CCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777899999999
Q ss_pred CCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccc
Q 000351 798 NQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEAS 877 (1623)
Q Consensus 798 H~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1623)
|+++.++.||+|++|++|+|+++|+++++.++++.|.++.......++..++.+..+..... .+... . +.......
T Consensus 798 H~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~ 873 (1495)
T PLN03232 798 NQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKL--GPTVT-I-DVSERNLG 873 (1495)
T ss_pred CChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccccccccccccccc--ccccc-c-cccccccc
Confidence 99999999999999999999999999999988888888776544221111100000000000 00000 0 00000000
Q ss_pred cccccccchhhhhhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHH
Q 000351 878 DTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYN 957 (1623)
Q Consensus 878 ~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~ 957 (1623)
...+.+..+....++|+++.|.+++++|++|+++.|+++.++++++++++.+++..++++|+++|++..........+|+
T Consensus 874 ~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l 953 (1495)
T PLN03232 874 STKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYI 953 (1495)
T ss_pred cccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHH
Confidence 00001111223456788889999999999999998887777777778888888899999999999976432233456899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHH
Q 000351 958 TIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMG 1037 (1623)
Q Consensus 958 ~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~ 1037 (1623)
++|++++++..++.+++.+++...+.++++++|++++++++++|++||+++|+|+++|||++|++.+|..++..+..++.
T Consensus 954 ~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~ 1033 (1495)
T PLN03232 954 VVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMN 1033 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHH
Q 000351 1038 QVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAD 1117 (1623)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~ 1117 (1623)
.++.+++.++++++..++..++++|++++++.++.+|.+++|++++.+..+++|+++++.|+++|+.+||+|+++++|.+
T Consensus 1034 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~ 1113 (1495)
T PLN03232 1034 QLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAK 1113 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHH
Confidence 99888888888888888888888888888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1118 INGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLA 1197 (1623)
Q Consensus 1118 ~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~ 1197 (1623)
.+.+..|.+++..+.....++|+.+++++++++++++.+.+.+...+..+....+++.+|++++|+..+..++.++++.+
T Consensus 1114 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~ 1193 (1495)
T PLN03232 1114 INGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQA 1193 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887766666666555444433333446788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCC
Q 000351 1198 SLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGA 1277 (1623)
Q Consensus 1198 ~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGS 1277 (1623)
..++..+.|++|+.++.+.|+|.+...+...+++.||.+|.|+|+||+|+|+++.++||+|+||+|+|||||||||||||
T Consensus 1194 ~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGS 1273 (1495)
T PLN03232 1194 SKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGA 1273 (1495)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCC
Confidence 99999999999999999988876432233345667999999999999999987767899999999999999999999999
Q ss_pred ChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHH
Q 000351 1278 GKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDA 1357 (1623)
Q Consensus 1278 GKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~ 1357 (1623)
|||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+++|+++++++++
T Consensus 1274 GKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~ 1353 (1495)
T PLN03232 1274 GKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDV 1353 (1495)
T ss_pred CHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhh
Q 000351 1358 IRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTI 1437 (1623)
Q Consensus 1358 i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti 1437 (1623)
|+++|+||||.++|+|.+|||||||||||||||+++|+|||||||||+||++||+.||++|++.+++||+|+||||++|+
T Consensus 1354 I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti 1433 (1495)
T PLN03232 1354 IDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTI 1433 (1495)
T ss_pred HHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHhhhhhHHHHHHH
Q 000351 1438 IDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSL 1486 (1623)
Q Consensus 1438 ~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~~~~~~~~~~~~ 1486 (1623)
.+||||+||++|+|+|+|+|+||+++++|.|++|++.++..+.+.++..
T Consensus 1434 ~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~~~~~~~~~ 1482 (1495)
T PLN03232 1434 IDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPANAQYLSNL 1482 (1495)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhhhHHHHHH
Confidence 9999999999999999999999999888899999999887766655544
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.8e-204 Score=2097.31 Aligned_cols=1427 Identities=36% Similarity=0.609 Sum_probs=1211.3
Q ss_pred CCcccc--ccccCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHhc-ccc-cccccchhhhHHHHHHHHHHHHhhHHHHH
Q 000351 16 GVWTKV--VDNAFGAYTPCATDSLVVSVSHLILMGLCFYRIWLIKK-DFK-VQRFCLKSKLYNYMLGFLAAYCTAEPLFQ 91 (1623)
Q Consensus 16 ~~~~~~--~~~~fg~~~~c~~~~~~~~~p~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (1623)
++|++. +++...+++|||++++++++|+++|++++|+|++.+++ +++ .... .++.+|.....++++++.+.
T Consensus 8 ~~~~~~~~~~~~~~d~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~- 82 (1522)
T TIGR00957 8 PLWDWNVTWHTSNPDFTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMT----HLNKTKTALGFLLWIVCWAD- 82 (1522)
T ss_pred CCCCCcccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcc----hHHHHHHHHHHHHHHHHHHH-
Confidence 457643 56666778999999999999999999999999999873 333 2221 23445655555555554311
Q ss_pred HHHHHhhcccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHHHHHHHHhhcccc-
Q 000351 92 LIMGISALDLDGQSGLAPFEILSLIIEALCWCSMLIMIFVETKVYIREFRWFVRFGVIYTLVGDAVMVNLILSVKNFYN- 170 (1623)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (1623)
++...+.. ..+....+..++++++.++++++++++++.||.+++||+.... .+|+..+++|.+..|+.|.......
T Consensus 83 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1522)
T TIGR00957 83 -LFYSFWER-SHGRAPAPVFLVSPTLLGITMLLATFLIQLERRKGVQSSGIML-TFWLVALVCALAILRSKILLALKEDA 159 (1522)
T ss_pred -HHHHHHhc-cccccccchhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchh-HHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 12222210 1111112466888889999999999999999999999986433 3344445778999999886532100
Q ss_pred ---chhHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccccccccccccCCCCCCCCCCccCchhhHHHHHhHHHHH
Q 000351 171 ---SSVLYLYMSEVIVQALFGLLLLVYVPELDPYPGYTPMRTELVDDAEYEELPGGEQICPERQANIFSRIFFSWMNPLM 247 (1623)
Q Consensus 171 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~Wl~pl~ 247 (1623)
......+...+.++ .++++ ++...++ .|..++ . ..+++.+||+++|++||++|||+||++
T Consensus 160 ~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~---~~~~~~------~---~~~~~~~~e~~a~~~s~~~f~W~~pl~ 222 (1522)
T TIGR00957 160 IVDPFRDTTFYIYFALV----LSQLV-LSCFSDK---SPLFSE------T---NHDPNPCPESSASFLSRITFWWITGMA 222 (1522)
T ss_pred cccceehhhHHHHHHHH----HHHHH-HHhhcCC---CCcccc------c---cccCCCCCcccCCHHHHHHHHHhHHHH
Confidence 00011112211111 12222 2211111 111110 0 012346899999999999999999999
Q ss_pred HhhccCCCCCCCCCCCCccccHHHHHHHHHHHHHHhc-----------------------------------------CC
Q 000351 248 KKGYEKFITEKDVWKLDTWDQTETLNNQFQKCWAKES-----------------------------------------QR 286 (1623)
Q Consensus 248 ~~g~~~~L~~~Dl~~l~~~~~s~~l~~~~~~~w~~~~-----------------------------------------~~ 286 (1623)
++|||++|+.+|||+++++++++.+.++|++.|+++. +.
T Consensus 223 ~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1522)
T TIGR00957 223 VYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKP 302 (1522)
T ss_pred HHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999998752 11
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 287 PKPWLLRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDG-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNV 365 (1623)
Q Consensus 287 ~~~~L~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (1623)
++++|+++++++|++.++.+++++++..++.+++|++++.+++++.++. +.+.||++++++++++++.+++.++|.|..
T Consensus 303 ~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1522)
T TIGR00957 303 RKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHIC 382 (1522)
T ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999999999999997643 345688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000351 366 MRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLL 445 (1623)
Q Consensus 366 ~r~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~ 445 (1623)
.+++.++|++|+..||+|+++++....++.++|+++|+|++|++++.++...+|.+|..|++++++++++|..+|+++++
T Consensus 383 ~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~ 462 (1522)
T TIGR00957 383 FVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLA 462 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 446 GALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAAC 525 (1623)
Q Consensus 446 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~ 525 (1623)
|++++++++|++.++++++++.++++++.+|+|++.++|+++|||+||+|+||+.+.+++++.|++|++..++..++..+
T Consensus 463 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 542 (1522)
T TIGR00957 463 GVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAV 542 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 000351 526 NSFILNSIPVLVTVVSFGMFTLL--GGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILL 603 (1623)
Q Consensus 526 ~~~~~~~~~~~~~~~~f~~~~~~--~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~ 603 (1623)
..+++...|.++.+++|++|.+. ++.++++.+|+++++++.+..|+..+|..++.+.++.+|++||++|++.++....
T Consensus 543 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~ 622 (1522)
T TIGR00957 543 GTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPD 622 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 87777788888888889888776 4679999999999999999999999999999999999999999999987654221
Q ss_pred C--CCCCC-CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcCc
Q 000351 604 P--NPPLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGT 680 (1623)
Q Consensus 604 ~--~~~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~~ 680 (1623)
. ..... .....|+++|++|+|+++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.++++
T Consensus 623 ~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G-~i~~~g~ 700 (1522)
T TIGR00957 623 SIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEG-HVHMKGS 700 (1522)
T ss_pred cccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCc-EEEECCE
Confidence 1 00111 112369999999999742 46799999999999999999999999999999999999999999 7788899
Q ss_pred EEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
||||||+||++++||+|||.||.++++++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++||
T Consensus 701 i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~ 780 (1522)
T TIGR00957 701 VAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNAD 780 (1522)
T ss_pred EEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHh--hhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHH
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIR--GELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 838 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~--~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 838 (1623)
++|||||||+||+++++++++.+++ +..+++|+|+|||+++++..||+|++|++|+|+++|+++++.++.+.+.++..
T Consensus 781 illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 860 (1522)
T TIGR00957 781 IYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLR 860 (1522)
T ss_pred EEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHH
Confidence 9999999999999999999999874 45678999999999999999999999999999999999999988777777765
Q ss_pred hhcchhhhhc-ccc-----cCcccc----cC--C-----CCCCCCC---CCCCCCc---c--cc-c-cc-ccccchhhhh
Q 000351 839 NAGKMEEYVE-EKE-----DGETVD----NK--T-----SKPAANG---VDNDLPK---E--AS-D-TR-KTKEGKSVLI 890 (1623)
Q Consensus 839 ~~~~~~~~~~-~~~-----~~~~~~----~~--~-----~~~~~~~---~~~~~~~---~--~~-~-~~-~~~~~~~~~~ 890 (1623)
.....++... ++. ..+... +. . ....... ....... . .. . .. ..++......
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1522)
T TIGR00957 861 TYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLM 940 (1522)
T ss_pred hhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhH
Confidence 3322111000 000 000000 00 0 0000000 0000000 0 00 0 00 0001112345
Q ss_pred hHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCcc--CCCCchHHHHHHHHHHHHHH
Q 000351 891 KQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSL--KTHGPLFYNTIYSLLSFGQV 968 (1623)
Q Consensus 891 ~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~~~~~~~~~~iy~~l~~~~~ 968 (1623)
.+|+++.|.+++++|++|+++.|. +.++++++++++.+++..+.++|+++|++.... ......+|+++|++++++..
T Consensus 941 ~~e~~~~g~v~~~~y~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~ 1019 (1522)
T TIGR00957 941 EADKAQTGQVELSVYWDYMKAIGL-FITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQG 1019 (1522)
T ss_pred HHHHHhcCcccHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHH
Confidence 667788999999999999998764 445556666677788889999999999975431 12234568889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhH
Q 000351 969 LVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVL 1048 (1623)
Q Consensus 969 ~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~ 1048 (1623)
++.++..+++...+.++++++|++++++++++|++||+++|+|+++|||++|++.+|..++..+..++..++.+++.+++
T Consensus 1020 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~ 1099 (1522)
T TIGR00957 1020 FAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIV 1099 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000351 1049 IGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIR 1128 (1623)
Q Consensus 1049 ~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~ 1128 (1623)
+++..|+++++++|++++++.++++|.+++|++++.+.++++|+++++.|+++|+.+||+|+++++|.+++.+..|.+++
T Consensus 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~ 1179 (1522)
T TIGR00957 1100 ILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQK 1179 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1129 YTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVE 1208 (1623)
Q Consensus 1129 ~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~ave 1208 (1623)
..+.....++|++.++++++.+++++++.+.+...+..+ ++.+|+++.|++.+..++.++++.+..+++.++|++
T Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~e 1254 (1522)
T TIGR00957 1180 AYYPSIVANRWLAVRLECVGNCIVLFAALFAVISRHSLS-----AGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVE 1254 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988777776666665556666 899999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhc
Q 000351 1209 RVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFR 1288 (1623)
Q Consensus 1209 Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~r 1288 (1623)
|+.++.+.|+|.+...+...+++.||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|
T Consensus 1255 Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~r 1334 (1522)
T TIGR00957 1255 RLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFR 1334 (1522)
T ss_pred HHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 99999998877643333344566899999999999999998776689999999999999999999999999999999999
Q ss_pred cccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchh
Q 000351 1289 IVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQ 1368 (1623)
Q Consensus 1289 l~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~ 1368 (1623)
+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+||++++++++|+++|+||||.
T Consensus 1335 l~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~ 1414 (1522)
T TIGR00957 1335 INESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHE 1414 (1522)
T ss_pred CccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeC
Q 000351 1369 VSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDS 1448 (1623)
Q Consensus 1369 v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1448 (1623)
++|+|.+||||||||+||||||+++|+|||||||||+||.+||+.||++|++.+++||||+||||++++.+||||+|||+
T Consensus 1415 v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1415 CAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDK 1494 (1522)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeecChhHHhhcCCChHHHHHHHhh
Q 000351 1449 GRVLEYDTPEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1449 G~ive~Gtp~eLl~~~~~~f~~l~~~~~ 1476 (1623)
|+|+|+|+|+||+++ +|.|++|++++|
T Consensus 1495 G~IvE~G~~~eLl~~-~~~f~~l~~~~g 1521 (1522)
T TIGR00957 1495 GEVAEFGAPSNLLQQ-RGIFYSMAKDAG 1521 (1522)
T ss_pred CEEEEECCHHHHHhC-CCHHHHHHHHcC
Confidence 999999999999987 589999998754
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.1e-189 Score=1945.40 Aligned_cols=1242 Identities=28% Similarity=0.523 Sum_probs=1089.9
Q ss_pred CCCCccCchhhHHHHHhHHHHHHhhccCCCCCCCCCCCCccccHHHHHHHHHHHHHHhc--CCCChhHHHHHHHHHHHHH
Q 000351 226 ICPERQANIFSRIFFSWMNPLMKKGYEKFITEKDVWKLDTWDQTETLNNQFQKCWAKES--QRPKPWLLRALNSSLGGRF 303 (1623)
Q Consensus 226 ~~pe~~a~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~l~~~~~~~w~~~~--~~~~~~L~~al~~~~~~~~ 303 (1623)
.+||+++|+|||++|||+||++++|||++|+.+|||+|+++++++.+.++|++.|+++. .+++++|+++++++|+|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999998864 2456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 304 WWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGP--AWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVF 381 (1623)
Q Consensus 304 ~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i~ 381 (1623)
+..++++++.+++.+++|++++.++++++..+. .+.||++++++++++++.+++.+++.|...+++.++|++|+..||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999954322 356888999999999999999999999999999999999999999
Q ss_pred HHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000351 382 RKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFII 461 (1623)
Q Consensus 382 ~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~~~~~ 461 (1623)
+|+++++....++.++|+++|+|++|++++.+++..+|.+|..|+++++++++||.++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 462 SRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVS 541 (1623)
Q Consensus 462 ~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 541 (1623)
+++.+.++++++.+|+|++.++|+++|||+||+|+||+.|.+++++.|++|++..++..++..+..+++...|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888899999999
Q ss_pred HHHHHHhCCCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcEEEEee
Q 000351 542 FGMFTLLGGDLTPARAFTSLSLFAVLRFPLF-MLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNG 620 (1623)
Q Consensus 542 f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~-~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i~~~~~ 620 (1623)
|++|.+.++ ++++.+|+++++|++++.|+. .+|..+..+.++.+|++||++||..++...... ......++++|+
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~---~~~~~~i~~~~~ 398 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY---NLTTTEVEMVNV 398 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc---cCCCCceEEecc
Confidence 999987654 789999999999999999985 799999999999999999999998776532211 111235999999
Q ss_pred EEEcCCC-------------------------------CCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC
Q 000351 621 YFSWDSK-------------------------------AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP 669 (1623)
Q Consensus 621 ~f~~~~~-------------------------------~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~ 669 (1623)
+|.|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|+++|
T Consensus 399 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~ 478 (1490)
T TIGR01271 399 TASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEP 478 (1490)
T ss_pred eEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 9999531 014689999999999999999999999999999999999999
Q ss_pred CCCCeEEEcCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 670 VSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 670 ~~g~~~~~~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
++| .+.+.++||||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|+||+|.+|++|.+|||||||||
T Consensus 479 ~~G-~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi 557 (1490)
T TIGR01271 479 SEG-KIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARI 557 (1490)
T ss_pred CCc-eEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHH
Confidence 999 7778899999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
+||||+|++|++|||||||||||+++++++++.|+....+|+|+|+|||+++.+..||+|++|++|+++++|+++++.+.
T Consensus 558 ~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~ 637 (1490)
T TIGR01271 558 SLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAK 637 (1490)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 99999999999999999999999999999999888777789999999999999999999999999999999999999876
Q ss_pred ChhHHHhHHhhcchh--------------------h--h-----hccc------ccCc--cc------------------
Q 000351 830 GELFQKLMENAGKME--------------------E--Y-----VEEK------EDGE--TV------------------ 856 (1623)
Q Consensus 830 ~~~~~~~~~~~~~~~--------------------~--~-----~~~~------~~~~--~~------------------ 856 (1623)
.+.+........... + . .++. +..+ ..
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1490)
T TIGR01271 638 RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFSF 717 (1490)
T ss_pred ChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 655555442100000 0 0 0000 0000 00
Q ss_pred -------------ccCCCCCCCCC-----C----CCCCC-----------------------cc-------c-----c--
Q 000351 857 -------------DNKTSKPAANG-----V----DNDLP-----------------------KE-------A-----S-- 877 (1623)
Q Consensus 857 -------------~~~~~~~~~~~-----~----~~~~~-----------------------~~-------~-----~-- 877 (1623)
......+.... . ....+ .. . .
T Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1490)
T TIGR01271 718 VQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFR 797 (1490)
T ss_pred ccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccc
Confidence 00000000000 0 00000 00 0 0
Q ss_pred ------------cc--------ccc------c-----cchhhhhhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 000351 878 ------------DT--------RKT------K-----EGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYF 926 (1623)
Q Consensus 878 ------------~~--------~~~------~-----~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~ 926 (1623)
.. ... . .......++|+++.|.++|++|++|+++.|+++.+++++++++
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~~~~ 877 (1490)
T TIGR01271 798 KKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCLVIF 877 (1490)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 00 000 0 0001134557778899999999999998887677677777778
Q ss_pred HHHHHHhhhhchhhhhcccC-------ccCC------------CCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 927 LTETLRVSSSTWLSYWTDQS-------SLKT------------HGPLFY-NTIYSLLSFGQVLVTLANSYWLIISSLYAA 986 (1623)
Q Consensus 927 ~~~~~~~~~~~wl~~w~~~~-------~~~~------------~~~~~~-~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s 986 (1623)
+.+++..+.++|+.+|.+.. .... ....+| +.+|..+.++..++.+++.+++...+.+++
T Consensus 878 ~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1490)
T TIGR01271 878 LAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTVS 957 (1490)
T ss_pred HHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999887521 0000 011233 455555555566777889999999999999
Q ss_pred HHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q 000351 987 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 1066 (1623)
Q Consensus 987 ~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1066 (1623)
+++|.+++++++++|+.||+++|+|+++|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|++++
T Consensus 958 ~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~~ 1037 (1490)
T TIGR01271 958 KRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAVI 1037 (1490)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1067 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 1146 (1623)
Q Consensus 1067 ~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1146 (1623)
++.++++|.+++|++++.+..+++|+++++.|+++|+.|||+|++++++.+++.+..+.+++..+...+.++|+..++++
T Consensus 1038 ~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~ 1117 (1490)
T TIGR01271 1038 FIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDI 1117 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc-
Q 000351 1147 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIE- 1225 (1623)
Q Consensus 1147 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~- 1225 (1623)
++.+++..++.+++... ..+ ++.+|++++|++.+...+.++++.+..++..+.|++|+.+|.+.|+|.+...+
T Consensus 1118 i~~~~~~~~~~l~~~~~-~~~-----~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~ 1191 (1490)
T TIGR01271 1118 IFVFFFIAVTFIAIGTN-QDG-----EGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGG 1191 (1490)
T ss_pred HHHHHHHHHHHHHHHHh-cCC-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 87765555444433322 223 56789999999999999999999999999999999999999988777532111
Q ss_pred -------------CCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC
Q 000351 1226 -------------SNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL 1292 (1623)
Q Consensus 1226 -------------~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p 1292 (1623)
...+++.||..|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++
T Consensus 1192 ~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~- 1270 (1490)
T TIGR01271 1192 GGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS- 1270 (1490)
T ss_pred ccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-
Confidence 123456799999999999999998777789999999999999999999999999999999999997
Q ss_pred CCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcC
Q 000351 1293 ERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEA 1372 (1623)
Q Consensus 1293 ~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~ 1372 (1623)
++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||++++++++++++|+||||.++|+
T Consensus 1271 ~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1271 TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEe
Q 000351 1373 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVL 1452 (1623)
Q Consensus 1373 G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~iv 1452 (1623)
|.+|||||||||||||||+++|+|||||||||+||.+||+.||++|++.+++||||+||||++++.+||||+||++|+|+
T Consensus 1351 G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~iv 1430 (1490)
T TIGR01271 1351 GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVK 1430 (1490)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecChhHHhhcCCChHHHHHHHhhhhhH
Q 000351 1453 EYDTPEELLSNEGSSFSKMVQSTGAANA 1480 (1623)
Q Consensus 1453 e~Gtp~eLl~~~~~~f~~l~~~~~~~~~ 1480 (1623)
|+|+|++|++ +++.|++|++..+..+.
T Consensus 1431 E~g~p~~Ll~-~~~~f~~l~~~~~~~~~ 1457 (1490)
T TIGR01271 1431 QYDSIQKLLN-ETSLFKQAMSAADRLKL 1457 (1490)
T ss_pred EeCCHHHHHc-CCcHHHHHHHHhChhcc
Confidence 9999999997 57899999998766543
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=9.9e-181 Score=1857.91 Aligned_cols=1249 Identities=33% Similarity=0.572 Sum_probs=1083.1
Q ss_pred CCCCCccCchhhHHHHHhHHHHHHhhccCCCCCCCCCCCCccccHHHHHHHHHHH----------HHHh-----------
Q 000351 225 QICPERQANIFSRIFFSWMNPLMKKGYEKFITEKDVWKLDTWDQTETLNNQFQKC----------WAKE----------- 283 (1623)
Q Consensus 225 ~~~pe~~a~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~l~~~~~~~----------w~~~----------- 283 (1623)
...||+++|||.++++.|++|++.++.|..|+.+|||+...+.++-++..++.+. |+-.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 3579999999999999999999999999999999999999888886665555442 3310
Q ss_pred -c------------------------------------------------------------------------------
Q 000351 284 -S------------------------------------------------------------------------------ 284 (1623)
Q Consensus 284 -~------------------------------------------------------------------------------ 284 (1623)
.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred ----------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHH
Q 000351 285 ----------QRPKPWLLRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPA-WIGYIYAFSIFVGVVL 353 (1623)
Q Consensus 285 ----------~~~~~~L~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~-~~g~~~~~~~~~~~~~ 353 (1623)
.++..+|+++++++|++.++.+++++++.+++.+++|++++.+++++++++.. ..|+++++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~ 297 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLI 297 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Confidence 01234899999999999999999999999999999999999999999765443 3577888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 354 GVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARK--NFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIIS 431 (1623)
Q Consensus 354 ~~~~~~~~~~~~~r~~~~ir~~L~~~i~~K~l~l~~~~~~--~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~ 431 (1623)
.+++.++|.+...+.+.++|++|...+|+|+++++..... +.++|+++|+|++|++++.+++..+|.+|..|++++++
T Consensus 298 ~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~ 377 (1560)
T PTZ00243 298 QSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLS 377 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987665 56899999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHH
Q 000351 432 LVLLYNELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRND 511 (1623)
Q Consensus 432 ~~lL~~~lg~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~ 511 (1623)
+++||.++||++++|++++++++|++.++++++.+.++++++.+|+|++.++|+++|||.||+||||+.|.+++++.|++
T Consensus 378 ~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~ 457 (1560)
T PTZ00243 378 ILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRAR 457 (1560)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 512 ELSWFRKAQFLAACNSFILNSIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRM 591 (1623)
Q Consensus 512 el~~~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI 591 (1623)
|++..++..++..+..++++++|.++++++|++|.+.++.+|++.+|+++++|+.++.|+.++|..++.+.++.+|++||
T Consensus 458 El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI 537 (1560)
T PTZ00243 458 ELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRI 537 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccccc----C------------CC-C--------------C-----------------------------CCCC
Q 000351 592 EEFLLAEEKIL----L------------PN-P--------------P-----------------------------LTSG 611 (1623)
Q Consensus 592 ~~fL~~~e~~~----~------------~~-~--------------~-----------------------------~~~~ 611 (1623)
++||..+|... . +. . + ....
T Consensus 538 ~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1560)
T PTZ00243 538 STFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHP 617 (1560)
T ss_pred HHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccc
Confidence 99998765210 0 00 0 0 0000
Q ss_pred CCcEEEEeeEEEcCCC-------------------------------------CCCCccccceeEecCCcEEEEEcCCCC
Q 000351 612 LPAISIRNGYFSWDSK-------------------------------------AERPTLLNINLDIPVGSLVAIVGGTGE 654 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~-------------------------------------~~~~~L~~isl~i~~G~~~~ivG~~Gs 654 (1623)
.+.+.++|++|+|+.. .++++|+|+||+|++|++++|+|||||
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGs 697 (1560)
T PTZ00243 618 SPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGS 697 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCC
Confidence 1246677777765310 134689999999999999999999999
Q ss_pred ChhHHHHHHcCCccCCCCCeEEEcCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccc
Q 000351 655 GKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEI 734 (1623)
Q Consensus 655 GKSTLl~~l~G~~~~~~g~~~~~~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~i 734 (1623)
||||||++|+|+++|++| .+..+++||||||+||++++||+|||.|+.++++++|.++++.|++.+|++.+|+|++|.+
T Consensus 698 GKSTLL~~i~G~~~~~~G-~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i 776 (1560)
T PTZ00243 698 GKSTLLQSLLSQFEISEG-RVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEI 776 (1560)
T ss_pred cHHHHHHHHhcCCCCCCc-EEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHh
Confidence 999999999999999999 6677889999999999999999999999988888899999999999999999999999999
Q ss_pred cCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeC
Q 000351 735 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 814 (1623)
Q Consensus 735 g~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~ 814 (1623)
|++|.+|||||||||+||||+|++|++||||||||+||+++++++++.++.+..+|+|+|+|||++++++.||+|++|++
T Consensus 777 ~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 777 GEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999887766679999999999999999999999999
Q ss_pred CEEEEecChhHHhhcChhHHHhHHhhcchhhhhcccccCc--ccccCCCCCC-CCC--CCCCCCcccccccccccchhhh
Q 000351 815 GMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGE--TVDNKTSKPA-ANG--VDNDLPKEASDTRKTKEGKSVL 889 (1623)
Q Consensus 815 G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 889 (1623)
|+++++|+++++.+.+ .+..+........+..+...+.+ .......... ... .....................+
T Consensus 857 G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhCh-HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 9999999999998754 45555433211110000000000 0000000000 000 0000000000000001112234
Q ss_pred hhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHH
Q 000351 890 IKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVL 969 (1623)
Q Consensus 890 ~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~ 969 (1623)
..+|+++.|.++|++|++|+++.|++..++++++++++.+++..++++|+++|++... ......|+++|+++.++..+
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~--~~~~~~~l~~y~~~~~~~~~ 1013 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF--KLSAATYLYVYLGIVLLGTF 1013 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--CCCcccHHHHHHHHHHHHHH
Confidence 5667788899999999999999888777777777777888899999999999987542 23345688999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHH
Q 000351 970 VTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLI 1049 (1623)
Q Consensus 970 ~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~ 1049 (1623)
+.+++.+.....+.++++++|++++++++++|+.|||++|+|+++|||++|++.+|..++..+..++..++.+++.++++
T Consensus 1014 ~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~ 1093 (1560)
T PTZ00243 1014 SVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVT 1093 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88788777778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000351 1050 GIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRY 1129 (1623)
Q Consensus 1050 ~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~ 1129 (1623)
++..|+++++++|++++++.+..+|.+..|++++....+++|+++++.|+++|+.+||+|+.++.+.+++.+..|.+.+.
T Consensus 1094 ~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~ 1173 (1560)
T PTZ00243 1094 SASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSC 1173 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1130 TLVNMGANRWLAIRLEIVGGLMIWLTATFAVV----QNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLN 1205 (1623)
Q Consensus 1130 ~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~----~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~ 1205 (1623)
.+.....++|+.++++++..+++++++.+.+. ..+..+ .+.+|++++|+..+..++.++++.+..++..+.
T Consensus 1174 ~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~ 1248 (1560)
T PTZ00243 1174 SYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQE-----IGLVSLSLTMAMQTTATLNWLVRQVATVEADMN 1248 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998887765544443332 122233 778999999999999999999999999999999
Q ss_pred HHHHHHHhhc-CCCCCCcc-----------------------ccCCCCC---CCCCCCccEEEEEEEEEeCCCCCCcccc
Q 000351 1206 AVERVGNYIE-LPSEAPLV-----------------------IESNRPP---PGWPSSGSIKFEDVVLRYRPELPPVLHG 1258 (1623)
Q Consensus 1206 aveRi~~~~~-~~~e~~~~-----------------------~~~~~~~---~~wp~~g~I~~~nVs~~Y~~~~~~vL~~ 1258 (1623)
+++|+.++.+ .|+|+... .+...++ +.||..|.|+|+||+|+|+++.++||+|
T Consensus 1249 s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~ 1328 (1560)
T PTZ00243 1249 SVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRG 1328 (1560)
T ss_pred HHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeec
Confidence 9999999996 44442110 0011122 2355678999999999998776789999
Q ss_pred eeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC
Q 000351 1259 LSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS 1338 (1623)
Q Consensus 1259 isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~ 1338 (1623)
|||+|+||||||||||||||||||+++|+|+++|++|+|+|||+||++++++++|++|++|||||+||+||||+||||++
T Consensus 1329 vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~ 1408 (1560)
T PTZ00243 1329 VSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL 1408 (1560)
T ss_pred ceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC-CcEEEEeCCCCCCCHHHHHHHHHH
Q 000351 1339 EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR-SKILVLDEATAAVDVRTDALIQKT 1417 (1623)
Q Consensus 1339 ~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~-p~ILlLDEpTS~LD~~Te~~Iq~~ 1417 (1623)
+++|+++|+||++++++++|+++|+||||.++|+|.||||||||||||||||+++ |+|||||||||+||++||+.||++
T Consensus 1409 ~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~ 1488 (1560)
T PTZ00243 1409 EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT 1488 (1560)
T ss_pred CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999996 899999999999999999999999
Q ss_pred HHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHhhhhhHHH
Q 000351 1418 IREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAANAQY 1482 (1623)
Q Consensus 1418 L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~~~~~~~~ 1482 (1623)
|++.++++|||+||||++++.+||+|+||++|+|+|+|+|+||+++++|.|++|++.++..+.+.
T Consensus 1489 L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~~~~~ 1553 (1560)
T PTZ00243 1489 VMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRSEAKR 1553 (1560)
T ss_pred HHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChhHHHH
Confidence 99999999999999999999999999999999999999999999988899999998877544433
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.4e-144 Score=1371.83 Aligned_cols=1150 Identities=22% Similarity=0.303 Sum_probs=855.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhcCCC-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 299 LGGRFWWGGFWKIGNDLSQFVGPLL---LNQLLQSMQQDGP-------AWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRV 368 (1623)
Q Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~P~l---l~~li~~l~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 368 (1623)
-++++++..+-.++..+....+|++ ...+.+.+..... ...++.+....+...+...+....+.+...|.
T Consensus 23 ~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq 102 (1228)
T KOG0055|consen 23 DRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQ 102 (1228)
T ss_pred chhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555556666666666654 3566665544321 11222222211222222233344466667777
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000351 369 GFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGA 447 (1623)
Q Consensus 369 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~ 447 (1623)
..++|......+.+ -+...++...+|++.+.|+.|+++|++++. .+..+......++.++++.+..-+..+++++
T Consensus 103 ~~riR~~yl~~iLr----Qdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l 178 (1228)
T KOG0055|consen 103 TARIRSKYLKAILR----QDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGWKLTLVML 178 (1228)
T ss_pred HHHHHHHHHHHHHh----CccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666655 444556666779999999999999999874 3333333444444555555555445899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 448 LLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNS 527 (1623)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~ 527 (1623)
.+.+++......+++.+.+...+.+++..+--+...|.+.+||+|-.|+-|+...++..+.-+.-.+...+......+..
T Consensus 179 ~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G~~~ 258 (1228)
T KOG0055|consen 179 SFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKGLGL 258 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998999999999999999999999999999999999999999999999988887777766666666665555554
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Q 000351 528 FILNSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPN 605 (1623)
Q Consensus 528 ~~~~~~~--~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~ 605 (1623)
.+..... .....++||...+..+..+++.+++++...-.-...|.+....+..+..|.+|..+|.+.++..+..+...
T Consensus 259 G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~ 338 (1228)
T KOG0055|consen 259 GFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYS 338 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCccc
Confidence 4443332 23445666666666788999999998866666667788888899999999999999999998765433221
Q ss_pred C---CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-----
Q 000351 606 P---PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----- 677 (1623)
Q Consensus 606 ~---~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----- 677 (1623)
. ........|+++||+|+||++++.++|+|+||+|++|+.++|||||||||||++++|.|.++|++| .+.+
T Consensus 339 ~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G-~V~idG~di 417 (1228)
T KOG0055|consen 339 KGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG-EVLIDGEDI 417 (1228)
T ss_pred ccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc-eEEEcCccc
Confidence 1 112234679999999999988778999999999999999999999999999999999999999999 4443
Q ss_pred --------cCcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 678 --------RGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 678 --------~~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+++||.|.|+|.||++||+|||.||+| .+.++..++.+.+...+.+..+|+|++|.+||+|..||||||||
T Consensus 418 ~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQR 497 (1228)
T KOG0055|consen 418 RNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQR 497 (1228)
T ss_pred hhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHH
Confidence 447999999999999999999999985 46889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhh
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
|||||||.+||+||||||||||||+++++.+. ..+....+|+|.|+|+||++.+++||+|++|++|+|+|+|+|+||++
T Consensus 498 IAIARalv~~P~ILLLDEaTSaLD~~se~~Vq-~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~ 576 (1228)
T KOG0055|consen 498 IAIARALVRNPKILLLDEATSALDAESERVVQ-EALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIA 576 (1228)
T ss_pred HHHHHHHHhCCCEEEecCcccccCHHHHHHHH-HHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999999999887775 46777889999999999999999999999999999999999999999
Q ss_pred cChhHHHhHHhhcchhhhhcccccCccc---ccCC-CCCCCCCCCCCCCccccc-ccccccchhhhhhHhhhhcccchHH
Q 000351 829 NGELFQKLMENAGKMEEYVEEKEDGETV---DNKT-SKPAANGVDNDLPKEASD-TRKTKEGKSVLIKQEERETGVVSFK 903 (1623)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~g~v~~~ 903 (1623)
.++.|.+++..+.......+++.+.+.. .... .+................ .....+........+. -..++.
T Consensus 577 ~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~---~~~s~~ 653 (1228)
T KOG0055|consen 577 LGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEGEDPEEPVSEED---EKVSFW 653 (1228)
T ss_pred ccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccccccccccccccccccccc---ccccHH
Confidence 9999999987664333211100000000 0000 000000000000000000 0000000000001111 122333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhh----hcccC-ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 904 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSY----WTDQS-SLKTHGPLFYNTIYSLLSFGQVLVTLANSYWL 978 (1623)
Q Consensus 904 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~----w~~~~-~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~ 978 (1623)
-..+|.+. .|+++++-.++.++.........+.++. ..... .........|..+|.+++++..++.++..+++
T Consensus 654 ~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f 731 (1228)
T KOG0055|consen 654 RIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFF 731 (1228)
T ss_pred HHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333322 3455544444444433333322222221 11111 11112234599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccc--CCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHH
Q 000351 979 IISSLYAAKRLHDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMS 1056 (1623)
Q Consensus 979 ~~~~~~~s~~lh~~ll~~ll~ap~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1623)
.+.+.+...++|..+++++++.++.|||. |. |.+.+|+.+|...+...+...+..+++.+..++..+++.++.+|.+
T Consensus 732 ~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~l 810 (1228)
T KOG0055|consen 732 GIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRL 810 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999995 55 9999999999999999999999999999999999999999999987
Q ss_pred HHHHH---HHHHHHHHHHHHHHH-HHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1057 LWAIM---PLLLLFYAAYLYYQS-TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLV 1132 (1623)
Q Consensus 1057 ~~~~~---~l~~~~~~i~~~y~~-~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~ 1132 (1623)
.++++ |++++....+..+.. ..++.+ ...........|++.+++||++|+.|++|.+.+.+.++...+....
T Consensus 811 alv~la~~Pll~~~~~~~~~~~~~~~~~~~----~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~ 886 (1228)
T KOG0055|consen 811 ALVVLATFPLLILSGYLQKKFLKGFSKDDK----KAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFK 886 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHH----HHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66554 444444444433332 222222 2222333466899999999999999999999999988887776544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1133 NMGANRWLAIRLEIVGGLMIWLTAT-----FAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAV 1207 (1623)
Q Consensus 1133 ~~~~~~wl~~~l~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~av 1207 (1623)
.. .|.++...+-..++.+..++ ..+...+..+....+-... ++.+ -...+..........-....|+
T Consensus 887 ~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~--~l~~---ta~~~~~~~s~~Pd~~ka~~Aa 958 (1228)
T KOG0055|consen 887 RG---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFM--ALSF---TAMALGQASSYAPDISKAKIAA 958 (1228)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHH--HHHH---HHHHHHHHHhhCcHHHHHHHHH
Confidence 33 33333332222222211111 1112333333211111111 1111 1223444455566677778899
Q ss_pred HHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCC-CCcccceeeEeCCCCEEEEecCCCCChhhHHHHh
Q 000351 1208 ERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTL 1286 (1623)
Q Consensus 1208 eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL 1286 (1623)
.++.++++.+++.+...+... ..-+.+|+|+|+||+|+|+... .+||+|+||+|++||.+||||||||||||++.+|
T Consensus 959 ~~iF~i~dr~~~i~~~~~~~~--~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LL 1036 (1228)
T KOG0055|consen 959 GSIFEILDRKPTIDPDSTSGG--KLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLL 1036 (1228)
T ss_pred HHHHHHhcCCCCCCCCCCCCC--ccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHH
Confidence 999999986553221111110 1113579999999999995321 3799999999999999999999999999999999
Q ss_pred hccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCc
Q 000351 1287 FRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGL 1365 (1623)
Q Consensus 1287 ~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gL 1365 (1623)
.|+|+|++|.|.|||.||+++++++||++|++|.|||.||++||||||... .+.+++||.+|++.+++|+||.++|+||
T Consensus 1037 eRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~Gy 1116 (1228)
T KOG0055|consen 1037 ERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGY 1116 (1228)
T ss_pred HHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcc
Confidence 999999999999999999999999999999999999999999999999976 3469999999999999999999999999
Q ss_pred chhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEE
Q 000351 1366 DAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILL 1445 (1623)
Q Consensus 1366 dt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~V 1445 (1623)
||.|||+|.+||||||||+|||||++|||+|||||||||+||.++|+.+|++|++...+||+|+|||||+||++||.|+|
T Consensus 1117 DT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~V 1196 (1228)
T KOG0055|consen 1117 DTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAV 1196 (1228)
T ss_pred cCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCceEeeecChhHHhhcCCChHHHHHHHh
Q 000351 1446 LDSGRVLEYDTPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1446 l~~G~ive~Gtp~eLl~~~~~~f~~l~~~~ 1475 (1623)
+++|+|+|.|||++|++ ++|.|++|++.+
T Consensus 1197 i~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1197 LKNGKVVEQGTHDELLA-KRGIYFRLVQLQ 1225 (1228)
T ss_pred EECCEEEecccHHHHHh-CCCchHHHhhhc
Confidence 99999999999999998 678999999754
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.9e-133 Score=1371.66 Aligned_cols=1172 Identities=18% Similarity=0.237 Sum_probs=865.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 291 LLRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGF 370 (1623)
Q Consensus 291 L~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 370 (1623)
+++-..+.+++.+++++++.++..++..+.|++++.+++.+...... ..+++.++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGENV---NDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445666778888888999999999999999999976432111 112223333344444555556666778888
Q ss_pred HHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000351 371 RLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVASLLGALL 449 (1623)
Q Consensus 371 ~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~ 449 (1623)
++...++..+|++.++++....+....|++.+.++.|++.++..+ ..+..+...++.++.++++++..-+..+++.+++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~ 206 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCV 206 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999999998888899999999999999999876 4566667777777777777776666677877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 450 LVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFI 529 (1623)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~ 529 (1623)
+++++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..+...+...+......+...+
T Consensus 207 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~ 286 (1466)
T PTZ00265 207 FPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGM 286 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88878788888889888888888888999999999999999999999999999999877666666555555555544333
Q ss_pred HHHHHH--HHHHHHHHHHHHhCC--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000351 530 LNSIPV--LVTVVSFGMFTLLGG--------DLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEE 599 (1623)
Q Consensus 530 ~~~~~~--~~~~~~f~~~~~~~~--------~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e 599 (1623)
...+.. .+.++.+|.+.+..+ .++++.+++.+........++..+...+..+..+.+|.+||.+.++.++
T Consensus 287 ~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~ 366 (1466)
T PTZ00265 287 INGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKP 366 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333322 234456677666543 5788888876655444445566666678899999999999999998765
Q ss_pred cccCCCC-CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-
Q 000351 600 KILLPNP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI- 677 (1623)
Q Consensus 600 ~~~~~~~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~- 677 (1623)
..+.... ...+....|+++|++|+|++.+++++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+
T Consensus 367 ~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G-~I~i~ 445 (1466)
T PTZ00265 367 LVENNDDGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEG-DIIIN 445 (1466)
T ss_pred CCCCCCCCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCC-eEEEe
Confidence 4221111 001112369999999999854345799999999999999999999999999999999999999999 4443
Q ss_pred -------------cCcEEEEccCcccCcccHHHHHhcCCC----------------------------------------
Q 000351 678 -------------RGTVAYVPQVSWIFNATVRDNILFGSA---------------------------------------- 704 (1623)
Q Consensus 678 -------------~~~iay~~Q~~~l~~~Tv~enI~~g~~---------------------------------------- 704 (1623)
++.||||+|+|.+|++||+|||.+|..
T Consensus 446 ~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (1466)
T PTZ00265 446 DSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDM 525 (1466)
T ss_pred CCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhc
Confidence 235999999999999999999998731
Q ss_pred ------------------CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeC
Q 000351 705 ------------------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDD 766 (1623)
Q Consensus 705 ------------------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDe 766 (1623)
.+++++.++++.+++.+.+..+|+|++|.+|++|.+|||||||||+||||++++|+||||||
T Consensus 526 ~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDE 605 (1466)
T PTZ00265 526 SNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDE 605 (1466)
T ss_pred ccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 23467788889999999999999999999999999999999999999999999999999999
Q ss_pred cccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCC------------------------------
Q 000351 767 PLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEG------------------------------ 815 (1623)
Q Consensus 767 p~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G------------------------------ 815 (1623)
|||+||+++++.|.+.+.+... +|+|+|+|||+++.+..||+|++|++|
T Consensus 606 pTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1466)
T PTZ00265 606 ATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDD 685 (1466)
T ss_pred cccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccccc
Confidence 9999999999999876554332 589999999999999999999999986
Q ss_pred -----------------EEEEecChhHHhh-cChhHHHhHHhhcchhhhhc-c--cccC---cccccCCCCCC-CCCCC-
Q 000351 816 -----------------MVKEEGTFEDLSN-NGELFQKLMENAGKMEEYVE-E--KEDG---ETVDNKTSKPA-ANGVD- 869 (1623)
Q Consensus 816 -----------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~-~--~~~~---~~~~~~~~~~~-~~~~~- 869 (1623)
+|+|+|+|+||++ ..+.|..++..+........ + +.+. ........... .....
T Consensus 686 ~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (1466)
T PTZ00265 686 NNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEMNG 765 (1466)
T ss_pred ccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccccccccccccc
Confidence 5999999999998 58889888866533211110 0 0000 00000000000 00000
Q ss_pred ----CCCC-c--ccccc--c--ccccchhhhhhHhhh----hcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhh
Q 000351 870 ----NDLP-K--EASDT--R--KTKEGKSVLIKQEER----ETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVS 934 (1623)
Q Consensus 870 ----~~~~-~--~~~~~--~--~~~~~~~~~~~~e~~----~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~ 934 (1623)
...+ . ..... + .+...+......+.. ......+..+.+++.... ..+++.+++.++..++...
T Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 843 (1466)
T PTZ00265 766 NSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYK--KDVTIIALSILVAGGLYPV 843 (1466)
T ss_pred cccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 0000 0 00000 0 000000000000000 000001222223332211 1133333344444445554
Q ss_pred hhchhhhhcccCccC---CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--CC
Q 000351 935 SSTWLSYWTDQSSLK---THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHT--NP 1009 (1623)
Q Consensus 935 ~~~wl~~w~~~~~~~---~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~--~~ 1009 (1623)
.++.++.+.+..... ......|..++++++++..++.++..++....+.+...+++.++++++++.|+.|||+ ++
T Consensus 844 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~ 923 (1466)
T PTZ00265 844 FALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHA 923 (1466)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCC
Confidence 555555544322110 1123356777778888888899999999999999999999999999999999999986 88
Q ss_pred chhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH---
Q 000351 1010 LGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS--TAREVKRL--- 1084 (1623)
Q Consensus 1010 ~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~--~~r~l~~l--- 1084 (1623)
+|++++|+++|++.+...+...+..++..++.+++.++++++.+|.+.++++|+++++........+ ..++.++.
T Consensus 924 ~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1466)
T PTZ00265 924 PGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEIN 1003 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999988888888888888888888888888888777665544333222211111 11111111
Q ss_pred ----------HHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 000351 1085 ----------DSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL---M 1151 (1623)
Q Consensus 1085 ----------~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~---~ 1151 (1623)
+.+..+.....+.|+++|+++||+|+.++++.+++.+..+...+..........+.....+++..+ +
T Consensus 1004 ~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1083 (1466)
T PTZ00265 1004 QPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSF 1083 (1466)
T ss_pred ccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122234556788999999999999999999999999888877666554443333332222222222 2
Q ss_pred HHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCC-C
Q 000351 1152 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRP-P 1230 (1623)
Q Consensus 1152 ~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~-~ 1230 (1623)
++.++.+. +..+..+ .+.+..++.+.+.....+..+...+..+.....+.+|+.++++.+++.+...+.... +
T Consensus 1084 ~~~~G~~l-v~~g~it-----~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~ 1157 (1466)
T PTZ00265 1084 AYWFGSFL-IRRGTIL-----VDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIK 1157 (1466)
T ss_pred HHHHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccc
Confidence 22222222 2344444 333222222222223345667778888899999999999999865432211111110 0
Q ss_pred CCCCCCccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----------------
Q 000351 1231 PGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----------------- 1292 (1623)
Q Consensus 1231 ~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p----------------- 1292 (1623)
...+..|.|+|+||+|+|+++ ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1158 ~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~ 1237 (1466)
T PTZ00265 1158 NKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMT 1237 (1466)
T ss_pred cCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccc
Confidence 012345789999999999642 23799999999999999999999999999999999999999
Q ss_pred -------------------------------------CCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcC
Q 000351 1293 -------------------------------------ERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLD 1335 (1623)
Q Consensus 1293 -------------------------------------~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd 1335 (1623)
++|+|+|||+||++++++++|++|+||||||+||+|||||||.
T Consensus 1238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~ 1317 (1466)
T PTZ00265 1238 NEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIK 1317 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHh
Confidence 6999999999999999999999999999999999999999999
Q ss_pred CC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHH
Q 000351 1336 PF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALI 1414 (1623)
Q Consensus 1336 ~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~I 1414 (1623)
++ .+.+|+++++|++.+++++||+++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|
T Consensus 1318 ~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I 1397 (1466)
T PTZ00265 1318 FGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLI 1397 (1466)
T ss_pred cCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHH
Confidence 76 35899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeC----ceEe-eecChhHHhhcCCChHHHHHHH
Q 000351 1415 QKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDS----GRVL-EYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1415 q~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~----G~iv-e~Gtp~eLl~~~~~~f~~l~~~ 1474 (1623)
+++|++.. +++|+|+||||++++.+||+|+||++ |+++ |.|+|+||+++.+|.|++|++.
T Consensus 1398 ~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~ 1464 (1466)
T PTZ00265 1398 EKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKL 1464 (1466)
T ss_pred HHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhh
Confidence 99999874 68999999999999999999999999 9954 8999999998667899999864
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-87 Score=812.54 Aligned_cols=561 Identities=26% Similarity=0.362 Sum_probs=465.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCcc-CC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 904 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSL-KT--HGPLFYNTIYSLLSFGQVLVTLANSYWLII 980 (1623)
Q Consensus 904 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~--~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~ 980 (1623)
..+.|.+.- |+.+...+++.++.....++.+.++....|.... .. ........+..++.+++.++++++.+++.+
T Consensus 137 rl~~l~~~~--~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~ 214 (716)
T KOG0058|consen 137 RLLGLLKPE--WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQY 214 (716)
T ss_pred HHHHHhchh--HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444432 3334444444455555566666555443332221 11 112224556677778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHH
Q 000351 981 SSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAI 1060 (1623)
Q Consensus 981 ~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1623)
.+.+...++|..++++++++.+.|||.+.+|++++|++.|...+.+.++..+...+.+....++.++++++.+|.+..+.
T Consensus 215 a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~ 294 (716)
T KOG0058|consen 215 AGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVT 294 (716)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1061 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 1140 (1623)
Q Consensus 1061 ~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1140 (1623)
+..+.+...+.++|-+..|++.+..+++-+.......|.+++++|+|+|+.|+...++|.+.+++-.+.........-.+
T Consensus 295 ~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f 374 (716)
T KOG0058|consen 295 LIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIF 374 (716)
T ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Confidence 66666666677777777777777777777778888899999999999999999888888888777666554443333222
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 000351 1141 AIRLEIVGGLMIWLTATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 1218 (1623)
Q Consensus 1141 ~~~l~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~ 1218 (1623)
....++.+.+....+..+ ..+..+.++ .+.+--.+.|...+...+..+...++.+....+|.+|+.++++.++
T Consensus 375 ~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt-----~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 375 FGSTNLLGNLAVLSILFYGGHLVLTGSLT-----SGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhHHHHHHhHHHHHHHHhccchhhcCccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 223333333222222211 223445555 6666677788888999999999999999999999999999999655
Q ss_pred CCCccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEE
Q 000351 1219 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRI 1297 (1623)
Q Consensus 1219 e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I 1297 (1623)
..+.. .. ..|. ..+|.|+|+||+|+|+.. ..+||||+||+|+|||+||+|||||+||||++++|.|+|+|++|+|
T Consensus 450 ~i~~~--G~-~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I 525 (716)
T KOG0058|consen 450 RIPLT--GT-LAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI 525 (716)
T ss_pred CCCCC--Cc-cccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 44322 11 1122 468999999999999643 2369999999999999999999999999999999999999999999
Q ss_pred EECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCC
Q 000351 1298 LIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1298 ~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~L 1376 (1623)
++||+||++++.++||++||+|.|||+||++||+|||.+. .+.+||+|.+|++.+++++||.++|+||||.|||+|..|
T Consensus 526 llDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 526 LLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred EECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 9999999999999999999999999999999999999754 367999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecC
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gt 1456 (1623)
||||||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||+||+++|+|+|+++|+|+|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCChHHHHHHHh
Q 000351 1457 PEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1457 p~eLl~~~~~~f~~l~~~~ 1475 (1623)
|+||+++++|.|++|++.+
T Consensus 686 h~eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 686 HDELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred HHHHhhCcccHHHHHHHHh
Confidence 9999999999999999764
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.3e-79 Score=778.68 Aligned_cols=549 Identities=29% Similarity=0.408 Sum_probs=470.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCC-CchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 916 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPLF-YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 993 (1623)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~~~-~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~l 993 (1623)
....-+++..++.+++...++.....-.|..-.... +... ...+++++++...++.+++.+.+.+.+.+....+-.++
T Consensus 154 ~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~ 233 (709)
T COG2274 154 RLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRF 233 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 344445556666777777778777777776543322 2222 33445566777889999999999999999999999999
Q ss_pred HHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 994 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 1073 (1623)
Q Consensus 994 l~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 1073 (1623)
++|+++.|+.||.++++|++++|+ +|++.|.+.+...+...+..+..++..++++++.+|.++++++..++++..+..+
T Consensus 234 ~~hll~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~ 312 (709)
T COG2274 234 FRHLLRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLI 312 (709)
T ss_pred HHHHHcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 5899999999999999999999999999999999999888877777777766666
Q ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1074 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW 1153 (1623)
Q Consensus 1074 y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 1153 (1623)
..+..|+.-+...+..+...++..|++.|+.|+|+.+.|.++..++++..++..+..+.......+......++..+..+
T Consensus 313 ~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v 392 (709)
T COG2274 313 FQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSV 392 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666777888999999999999999999999999999999988888887777776666665555544333
Q ss_pred HHHHHHH--HhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCC
Q 000351 1154 LTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 1231 (1623)
Q Consensus 1154 ~~~~~~v--~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~ 1231 (1623)
++..+.+ +..+..+ .|.+-...+....+++++..++..+..++....+.+|+.++++.|+|.+.. ..+..
T Consensus 393 ~iL~~G~~lVl~~~lT-----lG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~---~~~~~ 464 (709)
T COG2274 393 LILWFGAILVLEGELT-----LGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD---KTLIH 464 (709)
T ss_pred HHHHHHHHHHhcCCcc-----hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc---ccccc
Confidence 3333322 2334444 344444445556788899999999999999999999999999998885321 11344
Q ss_pred CCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH
Q 000351 1232 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 1311 (1623)
Q Consensus 1232 ~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~ 1311 (1623)
.|+..|.|+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|++++++++
T Consensus 465 ~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~ 544 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLAS 544 (709)
T ss_pred ccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHH
Confidence 56678999999999999988788999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+|++|||||||++||+||||||+...+ +.++|++++|++.+++++||+++|.||||.+||+|.+|||||||||+||||+
T Consensus 545 lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaL 624 (709)
T COG2274 545 LRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARAL 624 (709)
T ss_pred HHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999998765 4578999999999999999999999999999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHH
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~ 1470 (1623)
+++|+|||||||||+||++||+.|.+.|.+...+||+|+||||++++++||||+||++|||+|.|+|+||++. +|.|++
T Consensus 625 l~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~ 703 (709)
T COG2274 625 LSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYAR 703 (709)
T ss_pred ccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 788988
Q ss_pred HHHH
Q 000351 1471 MVQS 1474 (1623)
Q Consensus 1471 l~~~ 1474 (1623)
+++.
T Consensus 704 l~~~ 707 (709)
T COG2274 704 LYQQ 707 (709)
T ss_pred HHhc
Confidence 8764
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.9e-76 Score=756.55 Aligned_cols=546 Identities=31% Similarity=0.439 Sum_probs=443.2
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 918 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 997 (1623)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~l 997 (1623)
+.+.+++.++...+....++++....+...........+...++++.++..++.++..++..+.+.+...+++.++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l 95 (567)
T COG1132 16 LLLAILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKL 95 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455555666666655444433211112223444555555666777777778888888999999999999999
Q ss_pred hcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 998 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 1077 (1623)
Q Consensus 998 l~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~ 1077 (1623)
++.|+.+|+.+++|++++|+++|++.++..+......+...+..+++.+++++..+|.+.++++...+++.....++.+.
T Consensus 96 ~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 175 (567)
T COG1132 96 LRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARK 175 (567)
T ss_pred HhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888775555556778888888888888877776666555555555555555
Q ss_pred HHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Q 000351 1078 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM---IWL 1154 (1623)
Q Consensus 1078 ~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~---~~~ 1154 (1623)
.+...+......+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+. +..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (567)
T COG1132 176 SRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLA 255 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777777778889999999999999999999999977777766666555554433333333332222222222 222
Q ss_pred HHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCC
Q 000351 1155 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 1234 (1623)
Q Consensus 1155 ~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp 1234 (1623)
.+.+. ...+..+ .+.+...+.+...+..++..+......++....+.+|+.++.+.+++... ...+ ..+
T Consensus 256 ~~~~~-~~~~~~~-----~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~--~~~ 324 (567)
T COG1132 256 LGGFL-VLSGSLT-----VGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPDP--LKD 324 (567)
T ss_pred HHHHH-HHcCCCC-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCCC--CCC
Confidence 22222 2333344 67777788888888999999999999999999999999999987554211 1111 234
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
..|.|+|+||+|+|+++ +++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|.|||+||++++.+++|+
T Consensus 325 ~~~~I~f~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~ 403 (567)
T COG1132 325 TIGSIEFENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRK 403 (567)
T ss_pred CCCeEEEEEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHH
Confidence 56789999999999753 47999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCccccccHHhhcCCCCC-CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~~-~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+|++|||||+||+|||++||+++.+ ++|||+++|++.++++|+|+++|+||||.+||+|.+||||||||+|||||++++
T Consensus 404 ~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~ 483 (567)
T COG1132 404 RIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRN 483 (567)
T ss_pred hccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998865 799999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHH
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
|+|||||||||+||++||+.|++++++..+++|+|+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++|++
T Consensus 484 ~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~ 562 (567)
T COG1132 484 PPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQ 562 (567)
T ss_pred CCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHH
Confidence 9999999999999999999999999988889999999999999999999999999999999999999987 789999997
Q ss_pred Hhh
Q 000351 1474 STG 1476 (1623)
Q Consensus 1474 ~~~ 1476 (1623)
.++
T Consensus 563 ~~~ 565 (567)
T COG1132 563 AQG 565 (567)
T ss_pred Hhh
Confidence 653
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-74 Score=745.37 Aligned_cols=564 Identities=20% Similarity=0.254 Sum_probs=439.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCcc-C-C-CCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 904 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSL-K-T-HGPLFYNTIYSLLSFGQVLVTLANSYWLII 980 (1623)
Q Consensus 904 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~-~-~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~ 980 (1623)
.++.|.+... +.+++.+++.++...+....++.+.+..|.... . . .....+..+++++.++..++.+++.++...
T Consensus 12 ~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK11174 12 WLKQQSKPAK--RWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFK 89 (588)
T ss_pred HHHHHhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555432 233344445555555555556555554443210 0 1 111223444555566677778888888889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHH
Q 000351 981 SSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAI 1060 (1623)
Q Consensus 981 ~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1623)
.+.+...+++.++++++++.|+.+|++.++|++++|+++|++.++..+...+..++..++.++..++++++.+|.+.+++
T Consensus 90 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 169 (588)
T PRK11174 90 AGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888888888888888888888888877665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1061 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 1140 (1623)
Q Consensus 1061 ~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1140 (1623)
+.++++...+...+.+..++..+...+..+.+.+.+.|.++|+++||+|++++++.+++.+..++..+..........+.
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555545555555555555555556667888899999999999999999999999998888877776655444444334
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHhcCCccchh---h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000351 1141 AIRLEIVGGLMIWLTA-TFAVVQNGSAENQE---A-FASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIE 1215 (1623)
Q Consensus 1141 ~~~l~~~~~~~~~~~~-~~~v~~~~~~~~~~---~-~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~ 1215 (1623)
.....++..+..++++ .......+..+... . .....-..+.+...+..++..+...+..+.....+.+|+.++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 329 (588)
T PRK11174 250 SAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLE 329 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4333333332221111 11111112222100 0 01111122345556777888888889999999999999999998
Q ss_pred CCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCc
Q 000351 1216 LPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 1295 (1623)
Q Consensus 1216 ~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G 1295 (1623)
.|++.+.. ...+. ..+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|+| |++|
T Consensus 330 ~~~~~~~~--~~~~~-~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G 404 (588)
T PRK11174 330 TPLAHPQQ--GEKEL-ASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQG 404 (588)
T ss_pred CCCcccCC--Ccccc-CCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCc
Confidence 76543211 11000 11234579999999887654 57999999999999999999999999999999999999 9999
Q ss_pred EEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCC
Q 000351 1296 RILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 1374 (1623)
Q Consensus 1296 ~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~ 1374 (1623)
+|.+||+|+++++.+++|++|+||||||+||+|||||||..+ ++.+|+++++|++.++++++|+++|+|+||.+||+|.
T Consensus 405 ~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 405 SLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAA 484 (588)
T ss_pred EEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCC
Confidence 999999999999999999999999999999999999999977 4689999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeee
Q 000351 1375 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1375 ~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1454 (1623)
+|||||||||+||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~ 564 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQ 564 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeec
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHHHh
Q 000351 1455 DTPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1455 Gtp~eLl~~~~~~f~~l~~~~ 1475 (1623)
|+|+||+++ ++.|++++..+
T Consensus 565 G~~~eL~~~-~~~y~~l~~~q 584 (588)
T PRK11174 565 GDYAELSQA-GGLFATLLAHR 584 (588)
T ss_pred CCHHHHHhc-chHHHHHHHHh
Confidence 999999976 46898888653
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=8.7e-74 Score=749.93 Aligned_cols=543 Identities=24% Similarity=0.357 Sum_probs=446.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP--LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 994 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~--~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll 994 (1623)
.+...+++.++...+....+++.....|......... ...+.+++++.++..++.+++.+.+...+.+...+++.+++
T Consensus 162 ~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~ 241 (711)
T TIGR00958 162 WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLF 241 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666667777777777766555432111111 12344455566667777888888889999999999999999
Q ss_pred HHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 995 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 1074 (1623)
Q Consensus 995 ~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y 1074 (1623)
+++++.|+.||++++.|+++||+++|++.++..+...+..++..+..+++.+++++..+|.+.++++..+++.+.+...+
T Consensus 242 ~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~ 321 (711)
T TIGR00958 242 RSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVF 321 (711)
T ss_pred HHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999888776666666666666666
Q ss_pred HHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q 000351 1075 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGA---NRWLAIRLEIVGGLM 1151 (1623)
Q Consensus 1075 ~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~wl~~~l~~~~~~~ 1151 (1623)
.+..++..+...+..+...+++.|+++|+.+||+|+.++++.+++.+..++..+........ ..|....+..+..++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (711)
T TIGR00958 322 GKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVL 401 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666667778889999999999999999999999888888888766655433322 233333333333333
Q ss_pred HHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCC
Q 000351 1152 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 1231 (1623)
Q Consensus 1152 ~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~ 1231 (1623)
++.++... ...+.++ .+.+...+.|...+..++..+...+..+.....+.+|+.++.+.+++.+.. . ...
T Consensus 402 il~~g~~l-v~~g~it-----~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~--~~~ 471 (711)
T TIGR00958 402 VLYYGGQL-VLTGKVS-----SGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT--G--TLA 471 (711)
T ss_pred HHHHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--C--CCC
Confidence 32222222 3455566 666777777888899999999999999999999999999999866543211 1 111
Q ss_pred CCCCCccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH
Q 000351 1232 GWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1232 ~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~ 1310 (1623)
.++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|+++++.+
T Consensus 472 ~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~ 551 (711)
T TIGR00958 472 PLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHH 551 (711)
T ss_pred CCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHH
Confidence 23456789999999999743 24799999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
++|++|+||||||.+|+|||||||... .+.+|++++++++.++++++++++|+|+||.+||+|.+|||||||||+||||
T Consensus 552 ~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARA 631 (711)
T TIGR00958 552 YLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARA 631 (711)
T ss_pred HHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHH
Confidence 999999999999999999999999865 4578999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
++++|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||+++ ++.|+
T Consensus 632 Ll~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~-~~~y~ 708 (711)
T TIGR00958 632 LVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMED-QGCYK 708 (711)
T ss_pred HhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhC-CCchH
Confidence 999999999999999999999999999 334578999999999999999999999999999999999999976 46788
Q ss_pred HHH
Q 000351 1470 KMV 1472 (1623)
Q Consensus 1470 ~l~ 1472 (1623)
+|+
T Consensus 709 ~lv 711 (711)
T TIGR00958 709 HLV 711 (711)
T ss_pred hcC
Confidence 763
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.9e-73 Score=745.96 Aligned_cols=544 Identities=24% Similarity=0.295 Sum_probs=444.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCC-C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G-PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 994 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~-~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll 994 (1623)
.+...+++.++..++....++.+..-.|....... . ...+..+++++.++..++.+++.+.....+.+...+++..++
T Consensus 137 ~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (686)
T TIGR03797 137 DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVW 216 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555566666666666555544321111 1 122344555666667788888999999999999999999999
Q ss_pred HHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 995 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 1074 (1623)
Q Consensus 995 ~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y 1074 (1623)
+++++.|+.||++.+.|++++|++ |++.+++.+...+...+.....++..+++++..+|++.++.+.++++++.+..+.
T Consensus 217 ~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~ 295 (686)
T TIGR03797 217 DRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVL 295 (686)
T ss_pred HHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 7888888887777776766666777777788888887776665555555555555
Q ss_pred HHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1075 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 1154 (1623)
Q Consensus 1075 ~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~ 1154 (1623)
.+..+...+......+...+++.|+++|+.+||+++.++++.+++.+..+...+..+.....+.|......++..+...+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 375 (686)
T TIGR03797 296 GLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAA 375 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55445555555556677889999999999999999999999999998888888877777766666665555444332222
Q ss_pred HHHHHH--HhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCC
Q 000351 1155 TATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 1232 (1623)
Q Consensus 1155 ~~~~~v--~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~ 1232 (1623)
+..+.. ...+..+ .|.+-.+..+...+..++..+...+..+.....+.+|+.++.+.|+|.+.. ... .
T Consensus 376 il~~g~~lv~~g~lt-----iG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~--~ 445 (686)
T TIGR03797 376 LFAAAISLLGGAGLS-----LGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTD--P 445 (686)
T ss_pred HHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCC--C
Confidence 222221 2345555 555555556667788889999999999999999999999999876654211 111 1
Q ss_pred CCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh
Q 000351 1233 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1233 wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1312 (1623)
.+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++++
T Consensus 446 ~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~l 525 (686)
T TIGR03797 446 GKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAV 525 (686)
T ss_pred CCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHH
Confidence 12357899999999997655689999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1313 RKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|++|+||||||.+|+|||||||.++++.+|+++++|++.++++++++++|.|+||.+||+|.+||||||||++||||+++
T Consensus 526 r~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~ 605 (686)
T TIGR03797 526 RRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVR 605 (686)
T ss_pred HhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999877789999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHH
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 1472 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~ 1472 (1623)
+|+|||||||||+||++||+.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|+|+||+++ ++.|++++
T Consensus 606 ~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~ 682 (686)
T TIGR03797 606 KPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLA 682 (686)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHH
Confidence 99999999999999999999999999986 6899999999999999999999999999999999999975 57899888
Q ss_pred HH
Q 000351 1473 QS 1474 (1623)
Q Consensus 1473 ~~ 1474 (1623)
+.
T Consensus 683 ~~ 684 (686)
T TIGR03797 683 RR 684 (686)
T ss_pred Hh
Confidence 53
No 15
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-72 Score=727.21 Aligned_cols=546 Identities=25% Similarity=0.376 Sum_probs=438.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCC-CchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPLF---YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 992 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~~~---~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ 992 (1623)
.+...+++.++...+....++++....|....... .... +..+++++.++..++.++..+.....+.+...+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~ 103 (592)
T PRK10790 24 PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTD 103 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666677777777777776664321111 1111 1223444445566677778888888999999999999
Q ss_pred HHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 993 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYL 1072 (1623)
Q Consensus 993 ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 1072 (1623)
+++++++.|+.+|+..+.|++++|+++|++.++..+...+..++..+..++..++++++.+|++.++.+..+++...+..
T Consensus 104 l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~ 183 (592)
T PRK10790 104 VMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMV 183 (592)
T ss_pred HHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888888888888888888888888766554433333333333
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000351 1073 YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL-AIRLEIVGGLM 1151 (1623)
Q Consensus 1073 ~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~~~~~~ 1151 (1623)
.+.+..+...+......+....++.|+++|+.+||+|+.++++.+++.+..+...+........+.+. .....++..++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (592)
T PRK10790 184 IYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALI 263 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444566778889999999999999999999999888887776665544433333222 22222322222
Q ss_pred HHHH-HHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCC
Q 000351 1152 IWLT-ATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 1230 (1623)
Q Consensus 1152 ~~~~-~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~ 1230 (1623)
..++ ........+..+ .+.+...+.+...+..++..+...+..++....+.+|+.++.+.+++.+. ..
T Consensus 264 ~~~~~~~~~~~~~g~is-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~--- 332 (592)
T PRK10790 264 LCGLLMLFGFSASGTIE-----VGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---ND--- 332 (592)
T ss_pred HHHHHHHHHHHHCCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CC---
Confidence 1111 111112344444 55666667777888899999999999999999999999999876544211 11
Q ss_pred CCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH
Q 000351 1231 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1231 ~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~ 1310 (1623)
..++..+.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++++
T Consensus 333 ~~~~~~~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~ 411 (592)
T PRK10790 333 DRPLQSGRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHS 411 (592)
T ss_pred ccCCCCCeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHH
Confidence 112345789999999999754 4799999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
.+|++|+||||||.+|+||||+||.++++.+|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||+
T Consensus 412 ~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaL 491 (592)
T PRK10790 412 VLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVL 491 (592)
T ss_pred HHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHH
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~ 1470 (1623)
+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+||+++ ++.|++
T Consensus 492 l~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~ 570 (592)
T PRK10790 492 VQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQ 570 (592)
T ss_pred HhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHH
Confidence 9999999999999999999999999999998889999999999999999999999999999999999999987 478999
Q ss_pred HHHHh
Q 000351 1471 MVQST 1475 (1623)
Q Consensus 1471 l~~~~ 1475 (1623)
+++.+
T Consensus 571 l~~~~ 575 (592)
T PRK10790 571 MYQLQ 575 (592)
T ss_pred HHHHH
Confidence 98653
No 16
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.9e-73 Score=744.67 Aligned_cols=560 Identities=23% Similarity=0.313 Sum_probs=452.5
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 902 FKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP--LFYNTIYSLLSFGQVLVTLANSYWLI 979 (1623)
Q Consensus 902 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~--~~~~~iy~~l~~~~~~~~~~~~~~~~ 979 (1623)
+..++.+++... ......+++.++..++....++.+....|......... ..+..+++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSR--GALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555554322 22333444445555566666666665555432211111 12344455556667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHH
Q 000351 980 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 1059 (1623)
Q Consensus 980 ~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1623)
..+.+...+++.++++++++.|+.||++.++|++++|++.| +.+...+...+...+..+..++..+++++..+|++.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 67887777777777888888888888888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1060 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 1139 (1623)
Q Consensus 1060 ~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1139 (1623)
.+.+++++..+..++.+..++..+......+...+.+.|+++|+.+||++++++.+.+++.+..+...+..........+
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666666666666655556667778899999999999999999999999999888777777766655555555
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 000351 1140 LAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 1217 (1623)
Q Consensus 1140 l~~~l~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~ 1217 (1623)
......++..+..+++..+. .+..+..+ .+.+...+.+...+..++..+...+..+.....+.+|+.++.+.+
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt-----~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~ 453 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLT-----IGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNP 453 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55554444433222222221 23345555 566666667777888899999999999999999999999999877
Q ss_pred CCCCccccC--C-CCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCC
Q 000351 1218 SEAPLVIES--N-RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 1294 (1623)
Q Consensus 1218 ~e~~~~~~~--~-~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~ 1294 (1623)
+|.+..... . ...+.++..|.|+|+||+|+|+++.+++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 454 ~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 533 (710)
T TIGR03796 454 VDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWS 533 (710)
T ss_pred CccccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 664321100 0 0111134467899999999998655689999999999999999999999999999999999999999
Q ss_pred cEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCC
Q 000351 1295 GRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAG 1373 (1623)
Q Consensus 1295 G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G 1373 (1623)
|+|.+||+|+++++++++|++|+||||||.+|+|||||||..++ +.+|+++++|++.++++++++++|.|+||.++|+|
T Consensus 534 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 534 GEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred cEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 99999999999999999999999999999999999999998764 57999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEee
Q 000351 1374 ENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLE 1453 (1623)
Q Consensus 1374 ~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive 1453 (1623)
.+|||||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999987 6899999999999999999999999999999
Q ss_pred ecChhHHhhcCCChHHHHH
Q 000351 1454 YDTPEELLSNEGSSFSKMV 1472 (1623)
Q Consensus 1454 ~Gtp~eLl~~~~~~f~~l~ 1472 (1623)
.|+|+||+++ ++.|++++
T Consensus 692 ~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 692 RGTHEELWAV-GGAYARLI 709 (710)
T ss_pred ecCHHHHHHc-CCcHHHHh
Confidence 9999999975 57788876
No 17
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.1e-72 Score=743.06 Aligned_cols=557 Identities=21% Similarity=0.300 Sum_probs=448.5
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCC-c-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 902 FKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG-P-LFYNTIYSLLSFGQVLVTLANSYWLI 979 (1623)
Q Consensus 902 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~-~-~~~~~iy~~l~~~~~~~~~~~~~~~~ 979 (1623)
+..++.|++.. ...+...+++.++..++....++++..+.|........ . ..+..+++++.+...++.+++.++..
T Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQ--KKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555533 22334445555666667777777777776654322111 1 12333444455666778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHH
Q 000351 980 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 1059 (1623)
Q Consensus 980 ~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1623)
..+.+...+++.++++++++.|+.||+++++|++++|++ |.+.+.+.+.......+..+..++..++++++.+|.+.++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 300 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLL 300 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999998 8888887776666666666666677777777788877776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1060 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 1139 (1623)
Q Consensus 1060 ~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1139 (1623)
++..+++++.+..++.+..++..+......+...+.+.|+++|+.+||+|+.++++.+++.+..+...+..+.......+
T Consensus 301 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (708)
T TIGR01193 301 SLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQG 380 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555556666666666666667777788899999999999999999999999888887777666655544433333
Q ss_pred HHHHH---HHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000351 1140 LAIRL---EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL 1216 (1623)
Q Consensus 1140 l~~~l---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~ 1216 (1623)
..... ..+..+++++++.+.+ ..+..+ .|.+.....+...+..++..+...+..+.....+++|+.++.+.
T Consensus 381 ~~~~~~~~~~~~~i~il~~g~~lv-~~g~ls-----~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 381 QQAIKAVTKLILNVVILWTGAYLV-MRGKLT-----LGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33222 2222333333333333 355555 56666667777788889999999999999999999999999987
Q ss_pred CCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcE
Q 000351 1217 PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGR 1296 (1623)
Q Consensus 1217 ~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~ 1296 (1623)
|+|.+... .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 455 ~~e~~~~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 455 DSEFINKK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred CCcccccc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 76643211 111223456789999999999744 57999999999999999999999999999999999999999999
Q ss_pred EEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC--CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCC
Q 000351 1297 ILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF--SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 1374 (1623)
Q Consensus 1297 I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~--~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~ 1374 (1623)
|++||+|+++++++++|++|+||||||.+|+|||||||..+ .+.+|+++++|++.++++++++++|.||||.++|+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999999999976 3679999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeee
Q 000351 1375 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1375 ~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1454 (1623)
+|||||||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||+|+||++|+++|.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999974 78999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHH
Q 000351 1455 DTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1455 Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
|+|+||+++ ++.|+++++
T Consensus 690 G~~~~L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDR-NGFYASLIH 707 (708)
T ss_pred CCHHHHHhc-CCcHHHHhh
Confidence 999999986 578988874
No 18
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-74 Score=735.83 Aligned_cols=513 Identities=24% Similarity=0.355 Sum_probs=414.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHH
Q 000351 953 PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFV 1032 (1623)
Q Consensus 953 ~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~ 1032 (1623)
...+...|..++++..+..++...++.+.+.|...++|.++++++||+++.|||++..|++..|++.|++.+++.+...+
T Consensus 70 ~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKv 149 (1228)
T KOG0055|consen 70 VSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKV 149 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHH
Confidence 34577788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHH
Q 000351 1033 NMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY 1112 (1623)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~ 1112 (1623)
..++..+..+++.+++.++..|.+.++.+++.++.......+.+..-.....+..+-+..-+...|++.+++|+.||+.|
T Consensus 150 g~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq 229 (1228)
T KOG0055|consen 150 GNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGE 229 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 99999999999999999999998877665555544444333333333333333344445556778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 000351 1113 DRMADINGKSMDKNIRYTLVNMGANRW----LAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITS 1188 (1623)
Q Consensus 1113 ~~~~~~~~~~~d~~~~~~~~~~~~~~w----l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~ 1188 (1623)
++..+++.+.++...|........... ..+.+....++.+|....+.. .+..+ ++.+...+..++.-..
T Consensus 230 ~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~--~~~~~-----~g~v~~v~~~vl~g~~ 302 (1228)
T KOG0055|consen 230 KKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLIL--NGGYN-----GGDVITVFFSVLIGGM 302 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh--cCCCC-----CceEEEEEeehhhhhh
Confidence 999999999999888876543322111 111111112222222222222 12222 1111111111222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCC-CCcccceeeEeCCC
Q 000351 1189 LLTAVLRLASLAENSLNAVERVGNYIEL-PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPS 1266 (1623)
Q Consensus 1189 ~l~~~~~~~~~~e~~~~aveRi~~~~~~-~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~-~~vL~~isl~I~~G 1266 (1623)
.++..........+...|..++.+.++- |+.++.. +... ..-..+|.|+|+||+|+|+... .++|+|+||+|++|
T Consensus 303 sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~-~~~~--~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G 379 (1228)
T KOG0055|consen 303 SLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYS-KGGR--VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSG 379 (1228)
T ss_pred hhhccccchHHHhccccchHHHHHHhcCCCCCCccc-ccCC--cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCC
Confidence 3344444555566677888999998873 3333221 1111 1123578999999999996432 27999999999999
Q ss_pred CEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHH
Q 000351 1267 DKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADL 1345 (1623)
Q Consensus 1267 ekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i 1345 (1623)
|.|||||+|||||||++++|.|+|+|++|+|+|||.|+++++.+++|++||+|.|+|+||++||+|||.+.. +++++++
T Consensus 380 ~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i 459 (1228)
T KOG0055|consen 380 QTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEI 459 (1228)
T ss_pred CEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998765 6799999
Q ss_pred HHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCc
Q 000351 1346 WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSC 1425 (1623)
Q Consensus 1346 ~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~ 1425 (1623)
.+|++.+++++||.++|.||||.+||+|..||||||||+||||||+++|+|||||||||+||+++|+.+|++|++..+|+
T Consensus 460 ~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~gr 539 (1228)
T KOG0055|consen 460 EEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGR 539 (1228)
T ss_pred HHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHhh
Q 000351 1426 TMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1426 TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~~ 1476 (1623)
|+|+|||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++|++.+.
T Consensus 540 TTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 540 TTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQE 589 (1228)
T ss_pred eEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHh
Confidence 999999999999999999999999999999999999987 99999997653
No 19
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-71 Score=718.44 Aligned_cols=542 Identities=23% Similarity=0.309 Sum_probs=447.3
Q ss_pred HHHHHHHHHHHhhhhchhhhhcccCccCCCC-chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000351 922 LLCYFLTETLRVSSSTWLSYWTDQSSLKTHG-PLFY-NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILR 999 (1623)
Q Consensus 922 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~-~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ 999 (1623)
+++.++..++.....++++...+........ ...+ ...++++.++..++.+++.++....+.+....++..+++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 110 (582)
T PRK11176 31 GVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMG 110 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444444445455555665554433211111 1112 2223345566667777777888888999999999999999999
Q ss_pred CCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1000 APMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAR 1079 (1623)
Q Consensus 1000 ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r 1079 (1623)
.|..+|++.+.|++++|+++|++.+...+...+..++..++.++..++++++.+|++.++++..+++++++..+..+..+
T Consensus 111 ~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~ 190 (582)
T PRK11176 111 MPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFR 190 (582)
T ss_pred CCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888888888888888888888888888777666555555555555555555
Q ss_pred HHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1080 EVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFA 1159 (1623)
Q Consensus 1080 ~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1159 (1623)
+..+......+.+.+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++..+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g 270 (582)
T PRK11176 191 NISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAA 270 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666777888999999999999999999999999999988888887777666666666665555443332222221
Q ss_pred --HHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCc
Q 000351 1160 --VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSG 1237 (1623)
Q Consensus 1160 --v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g 1237 (1623)
....+..+ .+.+..++++...+..++..+...+..+.....+.+|+.++.+.+++.+.. . ....|..+
T Consensus 271 ~~~~~~g~is-----~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~--~---~~~~~~~~ 340 (582)
T PRK11176 271 SFPSVMDTLT-----AGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG--K---RVIERAKG 340 (582)
T ss_pred HHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC--C---cCCCCCCC
Confidence 12345555 677777777888888999999999999999999999999998866553211 1 11123456
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+
T Consensus 341 ~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~ 420 (582)
T PRK11176 341 DIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVA 420 (582)
T ss_pred eEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhce
Confidence 79999999999765568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCccccccHHhhcCCCC--CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1318 IIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1318 ~vpQdp~Lf~gTIr~NLd~~~--~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
||||||++|+||||+||.... +++|++++++++.++++++++++|.|+||.+||+|.+|||||||||+||||++++|+
T Consensus 421 ~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ 500 (582)
T PRK11176 421 LVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSP 500 (582)
T ss_pred EEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCC
Confidence 999999999999999998642 479999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHH
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~ 1474 (1623)
|||||||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|++|+++. +.|++|++.
T Consensus 501 ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~-~~y~~l~~~ 578 (582)
T PRK11176 501 ILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN-GVYAQLHKM 578 (582)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC-ChHHHHHHH
Confidence 999999999999999999999999988899999999999999999999999999999999999999864 689998864
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-71 Score=712.07 Aligned_cols=503 Identities=23% Similarity=0.328 Sum_probs=415.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHH
Q 000351 960 YSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQV 1039 (1623)
Q Consensus 960 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~ 1039 (1623)
+.++.++..++.++..++....+.+...+++.++++++++.|+.+|++.+.|++++|+++|++.++..+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666777788888888899999999999999999999999999999999999999999999999988888888888
Q ss_pred HHHhhHhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHH
Q 000351 1040 SQLLSTFVLIGIVSTMSLWAIMPLLLLF-YAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADI 1118 (1623)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~ 1118 (1623)
+.+++.++++++.+|.+.++++..++++ ..+..++.+..+...+......+.+.+.+.|.++|+++||+|+.++++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 8888888888888888776554333322 223344445545555555667788889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCccchhhHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000351 1119 NGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV-QNGSAENQEAFASTMGLLLSYA-LNITSLLTAVLRL 1196 (1623)
Q Consensus 1119 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~gl~l~~~-~~~~~~l~~~~~~ 1196 (1623)
+.+..++..+..........+.....+++..+...++..+... ..+..+ .+.+-.++.|. .....++..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t-----~g~l~a~~~~~~~~~~~~~~~l~~~ 300 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGVGGNAQ-----PGALIALFVFAALAAFEALMPVAGA 300 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888877776666655555555555444433322222221 123332 22222222222 3334566667777
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCC
Q 000351 1197 ASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTG 1276 (1623)
Q Consensus 1197 ~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsG 1276 (1623)
+........+.+|+.++.+.+++.+.. ...++ .+..+.|+|+||+|+|+++.+++|+|+||+|+|||++|||||||
T Consensus 301 ~~~~~~~~~s~~ri~~ll~~~~~~~~~--~~~~~--~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sG 376 (574)
T PRK11160 301 FQHLGQVIASARRINEITEQKPEVTFP--TTSTA--AADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTG 376 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--cccCC--CCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCC
Confidence 888888899999999999866542111 01111 13457899999999997644579999999999999999999999
Q ss_pred CChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHH
Q 000351 1277 AGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLK 1355 (1623)
Q Consensus 1277 SGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~ 1355 (1623)
||||||+++|.|+++|++|+|.+||+|+++++.+++|++|++|||||.+|++||||||.... +.+|++++++++.++++
T Consensus 377 sGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~ 456 (574)
T PRK11160 377 CGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLE 456 (574)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999998654 57999999999999999
Q ss_pred HHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCch
Q 000351 1356 DAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLN 1435 (1623)
Q Consensus 1356 ~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ 1435 (1623)
+++++ |+||||.+||+|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++
T Consensus 457 ~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~ 535 (574)
T PRK11160 457 KLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLT 535 (574)
T ss_pred HHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChh
Confidence 99999 99999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred hhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHH
Q 000351 1436 TIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1436 ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
++.+||+|++|++|+++|.|+|+||+++ ++.|+++++
T Consensus 536 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 536 GLEQFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQ 572 (574)
T ss_pred HHHhCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHh
Confidence 9999999999999999999999999976 578998875
No 21
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.8e-71 Score=729.95 Aligned_cols=547 Identities=23% Similarity=0.328 Sum_probs=440.8
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCC-Cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 904 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GP-LFYNTIYSLLSFGQVLVTLANSYWLIIS 981 (1623)
Q Consensus 904 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~-~~~~~iy~~l~~~~~~~~~~~~~~~~~~ 981 (1623)
.++.+++.. +..+...+++.++.+++....++.++.-.|....... .. ..+..+++++.++..++.+++.++....
T Consensus 137 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 137 WFWSTLKES--WPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444432 2233344455555566666666666665554321111 11 1233344445556777888899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHH
Q 000351 982 SLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIM 1061 (1623)
Q Consensus 982 ~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1623)
+.+...+++..+++++++.|+.| ++.++|++++|+ +|++.+.+.+...+...+..+..++..++++++.+|++.++.+
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 292 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPL 292 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999998 788999999999 7999999988877777777777777777778888888777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1062 PLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLA 1141 (1623)
Q Consensus 1062 ~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1141 (1623)
..+++++.+..++.+..++..+......+...+.+.|+++|+.+||+|+.++.+.+++.+..++..+..+.....+.+..
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (694)
T TIGR03375 293 VAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLAT 372 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555666666666666666778889999999999999999999999999888888777666665555444444
Q ss_pred HHHHHHHHH---HHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 000351 1142 IRLEIVGGL---MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 1218 (1623)
Q Consensus 1142 ~~l~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~ 1218 (1623)
....++..+ ++++++++. +..+..+ .|.+-..+.+...+..++..+...+..+.....+.+|+.++.+.++
T Consensus 373 ~~~~~~~~~~~~~il~~g~~~-v~~g~ls-----~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~ 446 (694)
T TIGR03375 373 NFAQFIQQLVSVAIVVVGVYL-ISDGELT-----MGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPV 446 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333333322 222222222 2345555 5666666777778888999999999999999999999999998776
Q ss_pred CCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEE
Q 000351 1219 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRIL 1298 (1623)
Q Consensus 1219 e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~ 1298 (1623)
|.+.. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.
T Consensus 447 e~~~~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 523 (694)
T TIGR03375 447 ERPEG---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVL 523 (694)
T ss_pred CCCCC---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 54221 111111234578999999999976556799999999999999999999999999999999999999999999
Q ss_pred ECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCC
Q 000351 1299 IDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1377 (1623)
Q Consensus 1299 IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LS 1377 (1623)
+||+|+++++++++|++|+||||||++|+|||||||...+ +.+|+++++|++.++++++++++|.|+||.+||+|.+||
T Consensus 524 idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LS 603 (694)
T TIGR03375 524 LDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLS 603 (694)
T ss_pred ECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCC
Confidence 9999999999999999999999999999999999999775 479999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecCh
Q 000351 1378 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1378 gGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||||||+||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|+||++|+++|.|+|
T Consensus 604 gGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~ 683 (694)
T TIGR03375 604 GGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPK 683 (694)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred hHHhhc
Q 000351 1458 EELLSN 1463 (1623)
Q Consensus 1458 ~eLl~~ 1463 (1623)
+||+++
T Consensus 684 ~eLl~~ 689 (694)
T TIGR03375 684 DQVLEA 689 (694)
T ss_pred HHHHHH
Confidence 999864
No 22
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.3e-71 Score=671.16 Aligned_cols=546 Identities=22% Similarity=0.286 Sum_probs=469.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 294 ALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQ-DGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRL 372 (1623)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i 372 (1623)
.+.+..++.+..+.++.++.......-|.+++++++.+.. .+....-.-.+..+.++.++++++.....+.....+.++
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667888889999999999999999999999999877 332111122334445556666777777666666777788
Q ss_pred HHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000351 373 RSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVASLLGALLLV 451 (1623)
Q Consensus 373 r~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~ 451 (1623)
-..++..+|++.++...+.+++..+|+++++++.|++.+.+.+ ..+....-+.++.+.++.+++..-.-.+++.++.++
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P 299 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVP 299 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhc
Confidence 8888888999999999999999999999999999999999865 567778888889988888888777778888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 452 FMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILN 531 (1623)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~ 531 (1623)
+++.+..+++++.++..++.+++..+-.+...|.+++||+||+|+.|+...++..+.-++-++..+|...........++
T Consensus 300 ~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~ 379 (716)
T KOG0058|consen 300 IVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTN 379 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHH
Confidence 99999999999999999999999999999999999999999999999998888877777766666666555444444433
Q ss_pred HHH--HHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCC
Q 000351 532 SIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLT 609 (1623)
Q Consensus 532 ~~~--~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 609 (1623)
... ..++++.+|.+.+..+.+|++...+++.+-..+..++..+...++.++++..|.+|+.++++.++.........+
T Consensus 380 ~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~~~p 459 (716)
T KOG0058|consen 380 LLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGTLAP 459 (716)
T ss_pred HHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCcccc
Confidence 332 346677788888889999999999999999999999999999999999999999999999998876433311111
Q ss_pred -CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE------------
Q 000351 610 -SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------ 676 (1623)
Q Consensus 610 -~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~------------ 676 (1623)
.-...|+|+||+|+||.+++.++|+|+||+|+|||.||+||||||||||+.++|..+|+|++| .+.
T Consensus 460 ~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG-~IllDG~~i~~~~~~ 538 (716)
T KOG0058|consen 460 DHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG-RILLDGVPISDINHK 538 (716)
T ss_pred ccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC-eEEECCeehhhcCHH
Confidence 234679999999999988888999999999999999999999999999999999999999999 443
Q ss_pred -EcCcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 677 -IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 677 -~~~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
++.+||+|.|||.||++||+|||.+|.+ .++|+++++.+.+..++.+..+|+|++|.|||+|..||||||||||||||
T Consensus 539 ~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARA 618 (716)
T KOG0058|consen 539 YLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARA 618 (716)
T ss_pred HHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHH
Confidence 3457999999999999999999999965 57789999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcC-hhH
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG-ELF 833 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~ 833 (1623)
|++||.||||||.|||||++++..+ +..+...++++|||+|+|+++.++.||+|+++++|+++|.|+|+||++.. +.|
T Consensus 619 Llr~P~VLILDEATSALDaeSE~lV-q~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly 697 (716)
T KOG0058|consen 619 LLRNPRVLILDEATSALDAESEYLV-QEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNGLY 697 (716)
T ss_pred HhcCCCEEEEechhhhcchhhHHHH-HHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcccHH
Confidence 9999999999999999999987766 45667777899999999999999999999999999999999999999887 789
Q ss_pred HHhHHhhc
Q 000351 834 QKLMENAG 841 (1623)
Q Consensus 834 ~~~~~~~~ 841 (1623)
.+++..+.
T Consensus 698 ~~Lv~~q~ 705 (716)
T KOG0058|consen 698 AKLVQRQL 705 (716)
T ss_pred HHHHHHhc
Confidence 99886543
No 23
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-73 Score=649.27 Aligned_cols=494 Identities=23% Similarity=0.390 Sum_probs=406.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHh
Q 000351 967 QVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTF 1046 (1623)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~ 1046 (1623)
+.++..+++++.......+.+.+-.++++|+....+.|+-....|+++.-..+-.+.+. .+...+.+....+.-+..++
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 45677788888999999999999999999999999999999999999888777776665 44444444444444444433
Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHH
Q 000351 1047 VL-IGIVSTMSLWAIMPLLLLFYAAYL----YYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGK 1121 (1623)
Q Consensus 1047 ~~-~~~~~~~~~~~~~~l~~~~~~i~~----~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~ 1121 (1623)
+. ....++|+.+++..++.+|..+.. +-.+..|++...+.++ ++.-.+++-+..|+|-|++++.-.+++.+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nes----rAr~vDsllNFETVKyy~Ae~yEverYre 426 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNES----RARQVDSLLNFETVKYYNAEDYEVERYRE 426 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhh----hhhhhhhhhcchhhhccCchhhhHHHHHH
Confidence 32 233456766666555555443322 2222223333333333 34557889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1122 SMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV--QNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASL 1199 (1623)
Q Consensus 1122 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~ 1199 (1623)
.++.+++..+.....-..+....+.+.++-......+.+. ..+..+ .|-.-+..+|.+++..+++++-..+..
T Consensus 427 Ail~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~lt-----VGDfVlf~TYliqLy~PLN~FGT~YR~ 501 (790)
T KOG0056|consen 427 AILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLT-----VGDFVLFLTYLIQLYMPLNFFGTYYRS 501 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeecccc-----ccceehHHHHHHHHhCchHHHHHHHHH
Confidence 9999999988877766666665555444333333322221 122222 555667889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCCh
Q 000351 1200 AENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGK 1279 (1623)
Q Consensus 1200 ~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGK 1279 (1623)
+++++.-.|++.+.++.++|. .+.+..+|---.+|.|+|+||+|.|.|+ +|||+||||+++||+.+|+|||||+||
T Consensus 502 iQ~nfiDmEnmfdllkee~eV---vd~P~a~pl~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGK 577 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPEV---VDLPGAPPLKVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGK 577 (790)
T ss_pred HHHhhhhHHHHHHHhhcCchh---hcCCCCCCccccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCch
Confidence 999999999999998755443 2322223333357999999999999887 489999999999999999999999999
Q ss_pred hhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHH
Q 000351 1280 SSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAI 1358 (1623)
Q Consensus 1280 STLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i 1358 (1623)
||++++|+|+++.++|.|.|||+||+++..+.+|++||+||||.+||+.||..||.... .++|||+.+|++.+++||-|
T Consensus 578 STimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrI 657 (790)
T KOG0056|consen 578 STIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRI 657 (790)
T ss_pred hHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998543 67999999999999999999
Q ss_pred HhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhh
Q 000351 1359 RRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTII 1438 (1623)
Q Consensus 1359 ~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~ 1438 (1623)
.++|+||+|.|||+|-.||||||||+|+||++|++|.|++||||||+||..||+.||+++.+..+++|.|+||||++||.
T Consensus 658 l~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTiv 737 (790)
T KOG0056|consen 658 LQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIV 737 (790)
T ss_pred hcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHH
Q 000351 1439 DCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1439 ~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~ 1474 (1623)
++|.|+|+++|+|+|.|+|+||+++++|.|++|++.
T Consensus 738 nAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 738 NADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred cccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 999999999999999999999999999999999964
No 24
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-71 Score=649.88 Aligned_cols=499 Identities=21% Similarity=0.320 Sum_probs=421.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHH
Q 000351 963 LSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQL 1042 (1623)
Q Consensus 963 l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~ 1042 (1623)
++++..+.-|..-+.......++-.++|.++++++...+..-......|+++||+..|++.+|..+-..+...+..+...
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 45566666677777788888999999999999999999988899999999999999999999999888888888888777
Q ss_pred hhHhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHH
Q 000351 1043 LSTFVLIGIVSTMSLWAIM-PLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGK 1121 (1623)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~-~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~ 1121 (1623)
++..+...+.++.+.+.+. .+++....+...+.+..+...+.-...+..+++++.|.+.|....+.||..+++.+.+.+
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 7777777777776655443 334444555555666667776667778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000351 1122 SMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLT-ATFAV-VQNGSAENQEAFASTMGLLLSYALNITSLLTAVL-RLAS 1198 (1623)
Q Consensus 1122 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~-~~~~v-~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~-~~~~ 1198 (1623)
..+...+..........|-...+.++.+.++... ...+. ...|..+ ...+.+++..++.....+..+. ....
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~-----~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALA-----QPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcc-----hhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 9999999999999999999999988887776633 33333 1122222 1111112222233334444444 5557
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCc-cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCC
Q 000351 1199 LAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSG-SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGA 1277 (1623)
Q Consensus 1199 ~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g-~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGS 1277 (1623)
+......|..|+.+..+.++|.... +. ..|..+ .++++||+|+|+++.+++|+|+||++++||||||+|||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~-~~-----~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGs 375 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFP-DE-----QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGS 375 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCC-cc-----ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCC
Confidence 7788889999999998866664322 11 111222 7999999999988877999999999999999999999999
Q ss_pred ChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHHhcHHH
Q 000351 1278 GKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALERAHLKD 1356 (1623)
Q Consensus 1278 GKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~ 1356 (1623)
||||++++|.|.++|++|+|.++|.+++.++.+++|+.|++++|.+.+|++|+|+||..- .+.|||++|+++++++|.+
T Consensus 376 GKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~ 455 (573)
T COG4987 376 GKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEK 455 (573)
T ss_pred CHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999754 3689999999999999999
Q ss_pred HHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchh
Q 000351 1357 AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNT 1436 (1623)
Q Consensus 1357 ~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~t 1436 (1623)
++++.|+||+|++||+|..|||||||||+|||+||++.+++||||||.+||++||+.|.+.|.+..+|+|+|+||||+..
T Consensus 456 l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~ 535 (573)
T COG4987 456 LLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRG 535 (573)
T ss_pred HHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHH
Q 000351 1437 IIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1437 i~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
++.||||+||++|+++|.|+|.+|+++ +|.|+++++
T Consensus 536 le~~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 536 LERMDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred HhhcCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 999999999999999999999999984 678998874
No 25
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-71 Score=659.35 Aligned_cols=508 Identities=24% Similarity=0.331 Sum_probs=431.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHH
Q 000351 955 FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNM 1034 (1623)
Q Consensus 955 ~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~ 1034 (1623)
.+++..++..++..++...+.......+.++...+|..+++++.+.+..+-+..|+|++....+..++.++..+...+..
T Consensus 41 ~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq 120 (559)
T COG4988 41 PLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQ 120 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556666677777888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhH
Q 000351 1035 FMGQVSQLLSTFVLIGIVSTMSLW---AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKA 1111 (1623)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~ 1111 (1623)
.+.+....+..++.+++.+|...+ +..|++++++.+.-. ..+...+....+-..+.++|.+.++|+.|+|+|+.
T Consensus 121 ~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~---~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~ 197 (559)
T COG4988 121 MFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGL---AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGR 197 (559)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcc
Confidence 999999888888888888876544 445666655544322 12222223344556778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-CCccchhhHHHHHHHHHHHHHHHHH
Q 000351 1112 YDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV--QN-GSAENQEAFASTMGLLLSYALNITS 1188 (1623)
Q Consensus 1112 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~--~~-~~~~~~~~~~~~~gl~l~~~~~~~~ 1188 (1623)
.+...++..+...+..+........+.--+..+|++..+.+.+++++... .. |..+ .+++. +++..+..+..
T Consensus 198 ~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~lt---l~~~l--~~LiLAPEff~ 272 (559)
T COG4988 198 TEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLT---LFAGL--FVLILAPEFFQ 272 (559)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc---HHHHH--HHHHHhHHHHH
Confidence 99999999999999999888888888888899999988877777766553 22 3333 22222 33444566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCE
Q 000351 1189 LLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDK 1268 (1623)
Q Consensus 1189 ~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~Gek 1268 (1623)
++..+-..+....+...+.+.+..+.+.|.+.+...+ .....|.....|+++|++++|+++. ++++|+||+++||++
T Consensus 273 PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~--~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~ 349 (559)
T COG4988 273 PLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGE--KAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQL 349 (559)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc--ccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcE
Confidence 8888888888888888889999999987765432211 1122233344567779999998664 899999999999999
Q ss_pred EEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCC-CCHHHHHH
Q 000351 1269 VGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWE 1347 (1623)
Q Consensus 1269 vgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~-~sd~~i~~ 1347 (1623)
+||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|+++++|||+|++|+|||||||..++. .+|+++++
T Consensus 350 talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~ 429 (559)
T COG4988 350 TALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIA 429 (559)
T ss_pred EEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997765 78999999
Q ss_pred HHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEE
Q 000351 1348 ALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTM 1427 (1623)
Q Consensus 1348 aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~Tv 1427 (1623)
+++++++.++++. |+|+||.+||+|.+|||||+|||+||||++++++++|+|||||+||.+||+.|++.|.+.++++||
T Consensus 430 al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktv 508 (559)
T COG4988 430 ALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTV 508 (559)
T ss_pred HHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeE
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHh
Q 000351 1428 LIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1428 I~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~ 1475 (1623)
|+||||++.+.++|+|+|||+||++|.|+|++|.++ ++.|++|+.++
T Consensus 509 l~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q 555 (559)
T COG4988 509 LVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQ 555 (559)
T ss_pred EEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHH
Confidence 999999999999999999999999999999999976 57899998653
No 26
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=5.4e-70 Score=703.30 Aligned_cols=546 Identities=23% Similarity=0.358 Sum_probs=460.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG--PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 994 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll 994 (1623)
.+++.+++.++..++....+++++...+........ ...+..+++++.+...++.+++.++....+.+....++..++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 94 (571)
T TIGR02203 15 GLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMF 94 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666666666666666554432211111 122344566677777788888899999999999999999999
Q ss_pred HHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 995 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 1074 (1623)
Q Consensus 995 ~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y 1074 (1623)
+++++.|..+|++.+.|++++|+++|++.++..+...+..++..+..++..++++++.+|++.++++.++++...+..++
T Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~ 174 (571)
T TIGR02203 95 EKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRV 174 (571)
T ss_pred HHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888777777777777777
Q ss_pred HHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1075 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 1154 (1623)
Q Consensus 1075 ~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~ 1154 (1623)
.+..++..+......++..+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (571)
T TIGR02203 175 SKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAV 254 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777778889999999999999999999999999999999988888877776666666666555544332222
Q ss_pred HHHH--HHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCC
Q 000351 1155 TATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 1232 (1623)
Q Consensus 1155 ~~~~--~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~ 1232 (1623)
+.++ .....+..+ .+.+...+.+...+..++..+...+..+.....+.+|+.++.+.+++.+.. ..+..
T Consensus 255 ~~~~g~~~~~~g~lt-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~- 325 (571)
T TIGR02203 255 VLFIALFQAQAGSLT-----AGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE- 325 (571)
T ss_pred HHHHHHHHHHcCCCC-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC-
Confidence 2222 123455555 667777777888888999999999999999999999999999866553211 11111
Q ss_pred CCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh
Q 000351 1233 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1233 wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1312 (1623)
+..+.|+++||+|+|++..+++|+|+||+|+|||+++|+|+||||||||+++|.|+++|++|+|++||+|+++++.+++
T Consensus 326 -~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~ 404 (571)
T TIGR02203 326 -RARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASL 404 (571)
T ss_pred -CCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHH
Confidence 2356799999999997655579999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEEcCCCccccccHHhhcCCCC--CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1313 RKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~gTIr~NLd~~~--~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
|++++||||||.+|+||||+||..+. +.+|++++++++.+++++++.++|.||||.++|+|.+||||||||+|||||+
T Consensus 405 ~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARal 484 (571)
T TIGR02203 405 RRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARAL 484 (571)
T ss_pred HhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999764 5899999999999999999999999999999999999999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHH
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~ 1470 (1623)
+++|+|||||||||+||.+|++.|.+.|++..+++|+|+||||.+.+..||+|++|++|++++.|+|++++++ ++.|++
T Consensus 485 l~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~ 563 (571)
T TIGR02203 485 LKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQ 563 (571)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHH
Confidence 9999999999999999999999999999998889999999999999999999999999999999999999976 467777
Q ss_pred HHH
Q 000351 1471 MVQ 1473 (1623)
Q Consensus 1471 l~~ 1473 (1623)
++.
T Consensus 564 ~~~ 566 (571)
T TIGR02203 564 LHN 566 (571)
T ss_pred HHH
Confidence 664
No 27
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.6e-70 Score=714.41 Aligned_cols=560 Identities=22% Similarity=0.315 Sum_probs=448.7
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCC-C-chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 902 FKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G-PLFYNTIYSLLSFGQVLVTLANSYWLI 979 (1623)
Q Consensus 902 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~-~~~~~~iy~~l~~~~~~~~~~~~~~~~ 979 (1623)
+..++.+++... ..+...+++.++..++....++.+..-.|....... . ...+..+++++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~~--~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRYR--KQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555554322 223334444445555555556666655554321111 1 122344455566667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHH
Q 000351 980 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 1059 (1623)
Q Consensus 980 ~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1623)
..+.+....++.++++++++.|+.||++.++|++++|+ +|++.+.+.+...+...+..+..++..++++++.+|.+.++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 283 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 69999998887777776666666666677788888887776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1060 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 1139 (1623)
Q Consensus 1060 ~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1139 (1623)
++..++++..+..+..+..++..+...+..+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..+.....+.+
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555544444444444444456677889999999999999999999999999998888877777666666666
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 000351 1140 LAIRLEIVGGLMIWLTATF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 1217 (1623)
Q Consensus 1140 l~~~l~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~ 1217 (1623)
.....+++..+..+++..+ .....+.++ .|.+.....+...+..++..+...+..++....+.+|+.++.+.|
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it-----~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 438 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALS-----PGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSP 438 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5555554443322222222 122345555 555556667777888899999999999999999999999999877
Q ss_pred CCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEE
Q 000351 1218 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRI 1297 (1623)
Q Consensus 1218 ~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I 1297 (1623)
+|.+.. ...+.+ ...|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|
T Consensus 439 ~e~~~~--~~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I 514 (694)
T TIGR01846 439 TEPRSA--GLAALP--ELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV 514 (694)
T ss_pred CCccCC--CCCCCC--CCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceE
Confidence 654211 111111 2357899999999997665679999999999999999999999999999999999999999999
Q ss_pred EECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCC
Q 000351 1298 LIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1298 ~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~L 1376 (1623)
++||+|+++++.+++|++++||||||.+|+|||||||...+ +.++++++++++.++++++++++|.|+||.++++|.+|
T Consensus 515 ~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~L 594 (694)
T TIGR01846 515 LVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANL 594 (694)
T ss_pred EECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCC
Confidence 99999999999999999999999999999999999998754 57899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecC
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gt 1456 (1623)
|||||||++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+
T Consensus 595 SgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~ 674 (694)
T TIGR01846 595 SGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGR 674 (694)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhhcCCChHHHHHHH
Q 000351 1457 PEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1457 p~eLl~~~~~~f~~l~~~ 1474 (1623)
|++|+++ ++.|+++++.
T Consensus 675 ~~~l~~~-~~~y~~l~~~ 691 (694)
T TIGR01846 675 HEELLAL-QGLYARLWQQ 691 (694)
T ss_pred HHHHHHc-CChHHHHHHh
Confidence 9999986 4789998864
No 28
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.1e-69 Score=695.40 Aligned_cols=542 Identities=21% Similarity=0.262 Sum_probs=432.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 292 LRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDG-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGF 370 (1623)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 370 (1623)
++...+.+++.++.++++.++..++..++|++++.+++.+..++ .....+.++++++++.++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777888899999999999999999999999999764221 11222333444555556667777777777788999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000351 371 RLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALL 449 (1623)
Q Consensus 371 ~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~ 449 (1623)
++...++..+|+|.++++.....+.++|++++++++|++++.+.+. .+..++...+.+++++++++..-++.+++.+++
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 172 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLGT 172 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998764 566666666666666666655544555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 450 LVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFI 529 (1623)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~ 529 (1623)
+++.+.+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+.-++..+...+..........+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (588)
T PRK11174 173 APLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSAV 252 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667778888889999999999999999999999999999999999988888555444333333332222222222
Q ss_pred HHHHHHH--HHHHHHHHHHHhCCCcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000351 530 LNSIPVL--VTVVSFGMFTLLGGDLTP---------ARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAE 598 (1623)
Q Consensus 530 ~~~~~~~--~~~~~f~~~~~~~~~lt~---------~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~ 598 (1623)
......+ +.++.++.+.+. +.++. ..++.++.+...+..|+..++..+..+.++.++++||.++++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 331 (588)
T PRK11174 253 LEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETP 331 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2221111 112223333333 33333 34555566777788999999999999999999999999999876
Q ss_pred ccccCCCC-CCC-CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE
Q 000351 599 EKILLPNP-PLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV 676 (1623)
Q Consensus 599 e~~~~~~~-~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~ 676 (1623)
+....... ..+ .....|+++|++|.|++ ++++|+|+||+|++|++++||||||||||||+++|+|++ |++| .+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G-~I~ 407 (588)
T PRK11174 332 LAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQG-SLK 407 (588)
T ss_pred CcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCc-EEE
Confidence 53211111 111 12235999999987764 367999999999999999999999999999999999999 8888 554
Q ss_pred EcC-------------cEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccC
Q 000351 677 IRG-------------TVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 677 ~~~-------------~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
+.+ +|+||||+|++|++||||||.+|++ .++++++++++.|+++++++.+|+|++|.+||+|.+||
T Consensus 408 i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 408 INGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred ECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 443 6999999999999999999999965 89999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 822 (1623)
|||||||+||||++++|+|+|||||||+||+++++.|.+.+ ....+++|+|+|||+++.++.||+|++|++|+|+++|+
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l-~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~ 566 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQAL-NAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGD 566 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCC
Confidence 99999999999999999999999999999999999999754 55568999999999999999999999999999999999
Q ss_pred hhHHhhcChhHHHhHHh
Q 000351 823 FEDLSNNGELFQKLMEN 839 (1623)
Q Consensus 823 ~~~l~~~~~~~~~~~~~ 839 (1623)
|+|++++++.|++++..
T Consensus 567 ~~eL~~~~~~y~~l~~~ 583 (588)
T PRK11174 567 YAELSQAGGLFATLLAH 583 (588)
T ss_pred HHHHHhcchHHHHHHHH
Confidence 99999998889888754
No 29
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.5e-68 Score=679.69 Aligned_cols=545 Identities=23% Similarity=0.343 Sum_probs=477.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 290 WLLRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVG 369 (1623)
Q Consensus 290 ~L~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 369 (1623)
+-++-.+.-+++.+.-.++..++..++.++.|++.+.++|.+-.......-+.+++++.+..+..+++...-.+....++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~ 222 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLG 222 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677778888889999999999999999999999876555444456666677777777777777777888899
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000351 370 FRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGAL 448 (1623)
Q Consensus 370 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~ 448 (1623)
.|+...+...+|+|.++++...+++.++|++++++ +|.+.|.+++. .+.......+.+++.+.+++.+-+..++++++
T Consensus 223 ~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~ 301 (709)
T COG2274 223 KRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLA 301 (709)
T ss_pred HHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997 57999999764 44444444445555666777778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 449 LLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSF 528 (1623)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~ 528 (1623)
.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+..+...+..........
T Consensus 302 ~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 381 (709)
T COG2274 302 AIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNT 381 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888877777776
Q ss_pred HHHHHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-
Q 000351 529 ILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPN- 605 (1623)
Q Consensus 529 ~~~~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~- 605 (1623)
+...+..+ +.++.||++.++.+.+|.|..+++.++.+.+..|+..+.+.+..+.+++.+.+|+.+.++.|.+.+.+.
T Consensus 382 ~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~ 461 (709)
T COG2274 382 IKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT 461 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 66655544 456788899999999999999999999999999999999999999999999999999999876533222
Q ss_pred -CCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------
Q 000351 606 -PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------- 677 (1623)
Q Consensus 606 -~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------- 677 (1623)
.........|+++|++|+|+++ ++++|+|+||+|++||+++|||+||||||||+|+|+|.++|.+| .+.+
T Consensus 462 ~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G-~I~~dg~dl~~ 539 (709)
T COG2274 462 LIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQG-RILLDGVDLND 539 (709)
T ss_pred cccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-eEEECCEeHHh
Confidence 1122334679999999999864 45899999999999999999999999999999999999999999 5443
Q ss_pred ------cCcEEEEccCcccCcccHHHHHhcCCCC-CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 678 ------RGTVAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~~Tv~enI~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
|..|+||+|++.+|+|||+|||.++.|. +.|+..++++.++.++++..+|.|++|.+||+|.+||||||||++
T Consensus 540 i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrla 619 (709)
T COG2274 540 IDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLA 619 (709)
T ss_pred cCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHH
Confidence 4579999999999999999999999875 458899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||||++++|+|+||||||||||+++++.|.+++.. ..+|+|+|+||||+..++.||+|+||++|+|+++|+++|+++.+
T Consensus 620 lARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~~ 698 (709)
T COG2274 620 LARALLSKPKILLLDEATSALDPETEAIILQNLLQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQG 698 (709)
T ss_pred HHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHH-HhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHhc
Confidence 99999999999999999999999999999987654 56789999999999999999999999999999999999999998
Q ss_pred hhHHHhHH
Q 000351 831 ELFQKLME 838 (1623)
Q Consensus 831 ~~~~~~~~ 838 (1623)
+.|..++.
T Consensus 699 g~y~~l~~ 706 (709)
T COG2274 699 GLYARLYQ 706 (709)
T ss_pred ChHHHHHh
Confidence 88887764
No 30
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.9e-69 Score=692.66 Aligned_cols=548 Identities=22% Similarity=0.306 Sum_probs=431.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 996 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ 996 (1623)
.+.+++++.++..++....++++....|..... .....+..+++++.++..+..++..........+....+..+++++
T Consensus 20 ~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 98 (588)
T PRK13657 20 LGILLAVANVLLAAATFAEPILFGRIIDAISGK-GDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFER 98 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666667777777776665543221 1111223333333333333333344444444555555666799999
Q ss_pred HhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 997 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 1076 (1623)
Q Consensus 997 ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~ 1076 (1623)
+++.|..+|++.+.|++++|+++|++.+...+...+..++..++..+..+++++..+|++.++++.++++++.+..++.+
T Consensus 99 l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~ 178 (588)
T PRK13657 99 IIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMR 178 (588)
T ss_pred HHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998777666766666666667777777788887777666666666666666666
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1077 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTA 1156 (1623)
Q Consensus 1077 ~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 1156 (1623)
..++..+......+.+.+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+..+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (588)
T PRK13657 179 KTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAIL 258 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66776666677778889999999999999999999999998888888877776655554444444443333322222221
Q ss_pred HH--HHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCC
Q 000351 1157 TF--AVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 1234 (1623)
Q Consensus 1157 ~~--~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp 1234 (1623)
.+ .....+..+ .+.+..++.++..+..++..+...+..+.....+.+|+.++.+.+++.+.. ....+. -+
T Consensus 259 ~~g~~~v~~g~lt-----~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~--~~~~~~-~~ 330 (588)
T PRK13657 259 VLGAALVQKGQLR-----VGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP--PGAIDL-GR 330 (588)
T ss_pred HHHHHHHHcCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCCCCc-CC
Confidence 11 223455555 566666667777788888888888888888889999999887754332111 010000 02
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
..+.|+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|.+||.|+++++.+++|+
T Consensus 331 ~~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~ 409 (588)
T PRK13657 331 VKGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRR 409 (588)
T ss_pred CCCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHh
Confidence 34679999999999743 47999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+|+||||||.+|+||||+||..+. +.+|++++++++.++++++++++|.|+||.++++|.+||||||||++||||++++
T Consensus 410 ~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~ 489 (588)
T PRK13657 410 NIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKD 489 (588)
T ss_pred heEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998764 5789999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHH
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++++.
T Consensus 490 ~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~ 568 (588)
T PRK13657 490 PPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLR 568 (588)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHH
Confidence 9999999999999999999999999998789999999999999999999999999999999999999976 578998886
Q ss_pred Hh
Q 000351 1474 ST 1475 (1623)
Q Consensus 1474 ~~ 1475 (1623)
..
T Consensus 569 ~~ 570 (588)
T PRK13657 569 AQ 570 (588)
T ss_pred Hh
Confidence 43
No 31
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-69 Score=637.47 Aligned_cols=507 Identities=24% Similarity=0.342 Sum_probs=391.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHH
Q 000351 954 LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVN 1033 (1623)
Q Consensus 954 ~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~ 1033 (1623)
..-+..|.+..+++.+++.++.+.+.....++-+....+.+++.++..+++|....+|.+.+....-...|...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 44677899999999999999999999999999999999999999999999999999999988888777777777766666
Q ss_pred HHHHHHHHHhhHhhHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhH
Q 000351 1034 MFMGQVSQLLSTFVLIGIV-STMSLWAIMPLLLLFYAAYLYY-QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKA 1111 (1623)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~i~~~y-~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~ 1111 (1623)
.++..++.+......+.+- .+.+.++++..+. .|..+-.+ .+...+.|+....+........-|++.+-.+||+|+.
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~-~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNn 232 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVG-AYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNN 232 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH-HhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHccc
Confidence 6666655554444333332 2333333322222 23222211 1112223333444455556677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCccchhhHHHHHHHHHHHHHHHHHH
Q 000351 1112 YDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV--QNGSAENQEAFASTMGLLLSYALNITSL 1189 (1623)
Q Consensus 1112 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~gl~l~~~~~~~~~ 1189 (1623)
|++..+++...+....+......+....+.+-..++.......+..+... ..+..+ .+-+-+.-+...++..+
T Consensus 233 E~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mt-----vgdlv~~n~l~~qL~~~ 307 (591)
T KOG0057|consen 233 EEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMT-----VGDLVMVNSLLFQLSLP 307 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc-----ccchhhHHHHHHHHHhH
Confidence 99999999999998888876666555555554444443332222222221 112222 22333334444555556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEE
Q 000351 1190 LTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKV 1269 (1623)
Q Consensus 1190 l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~Gekv 1269 (1623)
+..+-..+..+...+.-.+-+....+ .+. ...+. +.+.-...|.|+|+||+|.|+|+ +++|+++||+|++||||
T Consensus 308 l~~Lg~vyr~~~q~l~Dm~~~~~l~~--~~~-~i~~~--~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekV 381 (591)
T KOG0057|consen 308 LNFLGSVYRELRQALTDMRTLFILLE--VDE-DIQEA--ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKV 381 (591)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhh--hhh-hhhhc--cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEE
Confidence 66665555555554444333322211 111 01111 11222345679999999999876 46999999999999999
Q ss_pred EEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHH
Q 000351 1270 GIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEA 1348 (1623)
Q Consensus 1270 gIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~a 1348 (1623)
||||+|||||||++++|+|+++ ++|+|+|||+||++++++.+|+.||+||||..||++||-+||...+ ..+|+|+.++
T Consensus 382 aIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~ 460 (591)
T KOG0057|consen 382 AIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEA 460 (591)
T ss_pred EEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHH
Confidence 9999999999999999999999 9999999999999999999999999999999999999999998554 5799999999
Q ss_pred HHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEE
Q 000351 1349 LERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTML 1428 (1623)
Q Consensus 1349 L~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI 1428 (1623)
+++++++|.+.++|+||+|.|||+|..||||||||++||||++++|+|+++|||||+||.+||+.|.++|.+...++|+|
T Consensus 461 ~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI 540 (591)
T KOG0057|consen 461 CKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVI 540 (591)
T ss_pred HHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHH
Q 000351 1429 IIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1429 ~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~ 1474 (1623)
+|+||++++++||+|++|++|+|+|.|+|+||++ +++.|..++..
T Consensus 541 ~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~ 585 (591)
T KOG0057|consen 541 MIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTT 585 (591)
T ss_pred EEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcc
Confidence 9999999999999999999999999999999998 67778877754
No 32
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.1e-69 Score=687.79 Aligned_cols=507 Identities=22% Similarity=0.284 Sum_probs=401.2
Q ss_pred HHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 920 ILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTI--YSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 997 (1623)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i--y~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~l 997 (1623)
..+++.++..++....++.+++..|...........+..+ .+++.++..++.++..++....+.+...+++.++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 96 (529)
T TIGR02868 17 VAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRL 96 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445555555555555555544322111111111111 12244556667777788888888999999999999999
Q ss_pred hcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000351 998 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFY-AAYLYYQS 1076 (1623)
Q Consensus 998 l~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~i~~~y~~ 1076 (1623)
++.|..||++.++|++++|+++|++.++..+...+..++..+..++..++++++.+|.+.++++..+++++ ....++.+
T Consensus 97 l~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~ 176 (529)
T TIGR02868 97 ARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLR 176 (529)
T ss_pred hccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888888888888888888887776555443333 33344444
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1077 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTA 1156 (1623)
Q Consensus 1077 ~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 1156 (1623)
..++..+......+.+.+++.|.++|+++||+|+.++.+.+++.+..+...+..........+......++..+..+++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (529)
T TIGR02868 177 AARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGAL 256 (529)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555455556678889999999999999999999999999999888877776655554444444444443333222222
Q ss_pred HHH--HHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCC
Q 000351 1157 TFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 1234 (1623)
Q Consensus 1157 ~~~--v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp 1234 (1623)
.+. ....+..+ .+.+...+.++..+..++..+...+..+.....+.+|+.++.+.+++.+.. +...+...+|
T Consensus 257 ~~g~~~~~~g~~t-----~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~~~~~~~~ 330 (529)
T TIGR02868 257 WAGGPAVADGTLA-----PATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG-VVPAAGALGL 330 (529)
T ss_pred HHHHHHHhCCCCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC-CCCCCcccCC
Confidence 221 13345555 566666777777888888899999999999999999999999866553211 1111111234
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|++++ .+++|+
T Consensus 331 ~~~~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~ 408 (529)
T TIGR02868 331 GKPTLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRR 408 (529)
T ss_pred CCceEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHh
Confidence 45789999999999754 3699999999999999999999999999999999999999999999999999999 999999
Q ss_pred ceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+|+||||||++|+|||||||..+. +.+|+++++|++.++++++++++|+||||.+||+|.+||||||||||||||++++
T Consensus 409 ~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~ 488 (529)
T TIGR02868 409 RISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLAD 488 (529)
T ss_pred heEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999754 5799999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCc
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 1434 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl 1434 (1623)
|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 489 ~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 489 APILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999988999999999995
No 33
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.9e-67 Score=689.22 Aligned_cols=543 Identities=21% Similarity=0.253 Sum_probs=455.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 290 WLLRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVG 369 (1623)
Q Consensus 290 ~L~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 369 (1623)
++++..++.+++.++..++..++..++.++.|++++.++|.+-.......-+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566778888889999999999999999999999998764332222333444455555566666666677788899
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000351 370 FRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGAL 448 (1623)
Q Consensus 370 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~ 448 (1623)
.++...++..+|+|.++++....++.++|+++++++ |++.+.+.+. .+.......+.+++++++++...++.+++.++
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 283 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVA 283 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999889999999999997 8999988653 23333333344455666666666777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 449 LLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSF 528 (1623)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~ 528 (1623)
++++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.++.|+.+.+++++..++..+...+..........
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (686)
T TIGR03797 284 LALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTV 363 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777778888889999999999999999999999999999999999999999999988888777776666666665555
Q ss_pred HHHHHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC
Q 000351 529 ILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP 606 (1623)
Q Consensus 529 ~~~~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 606 (1623)
+...+..+ +.++.+|.+.+..+.+|.+.++++..++..+..|+..++..+..+.++.++++|+.++++.++.......
T Consensus 364 ~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~ 443 (686)
T TIGR03797 364 FNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAKT 443 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcC
Confidence 54444333 2344566677778899999999999999999999999999999999999999999999987553221111
Q ss_pred CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------
Q 000351 607 PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------- 677 (1623)
Q Consensus 607 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------- 677 (1623)
........|+++|++|+|+++ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+
T Consensus 444 ~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G-~I~idg~~i~~~~ 521 (686)
T TIGR03797 444 DPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESG-SVFYDGQDLAGLD 521 (686)
T ss_pred CCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC-EEEECCEEcCcCC
Confidence 111123469999999999743 46899999999999999999999999999999999999999999 4443
Q ss_pred ----cCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 678 ----RGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 678 ----~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
++.||||||+|++|++||+|||.++++.+++++.++++.|+++++++.+|+|++|.+||+|.+||||||||++|||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialAR 601 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIAR 601 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHH
Confidence 3469999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhH
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELF 833 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 833 (1623)
|++++|+|+|||||||+||+++++++.+.+... ++|+|+|||+++.++.||+|++|++|+|+++|++++++++++.|
T Consensus 602 All~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y 678 (686)
T TIGR03797 602 ALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREGLF 678 (686)
T ss_pred HHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCcHH
Confidence 999999999999999999999999999876542 58999999999999999999999999999999999999988888
Q ss_pred HHhHH
Q 000351 834 QKLME 838 (1623)
Q Consensus 834 ~~~~~ 838 (1623)
.++..
T Consensus 679 ~~l~~ 683 (686)
T TIGR03797 679 AQLAR 683 (686)
T ss_pred HHHHH
Confidence 88764
No 34
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=7.1e-68 Score=683.94 Aligned_cols=548 Identities=24% Similarity=0.367 Sum_probs=441.6
Q ss_pred HHHHHHHHHHHHHHhhhhchhhhhcccCccCCC-C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 919 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G-PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 996 (1623)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~-~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ 996 (1623)
.+.+++.++..++....++.+..-.+....... . ...+..+++++.+...++.+++.++....+.+....++..++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 100 (576)
T TIGR02204 21 LAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAH 100 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555655555555544443111111 1 11233344444555566677788888888999999999999999
Q ss_pred HhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 997 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 1076 (1623)
Q Consensus 997 ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~ 1076 (1623)
+++.|..+|+....|++++|+++|++.++..+...+..++..+..+++.+++++..+|++.++++..+++++.+..++.+
T Consensus 101 l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~ 180 (576)
T TIGR02204 101 LISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGR 180 (576)
T ss_pred HHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888888888776655555555555555555
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1077 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTA 1156 (1623)
Q Consensus 1077 ~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 1156 (1623)
..+...+.....+....+++.|.++|+.+||+|+.++.+.+++.+..+...+..........|......++..+..++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (576)
T TIGR02204 181 RVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVL 260 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666667778888999999999999999999999998888888877666555554555554444333322221111
Q ss_pred --HHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCC
Q 000351 1157 --TFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 1234 (1623)
Q Consensus 1157 --~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp 1234 (1623)
+......+..+ .+.+..+..+...+..++..+...+..+.....+.+|+.++.+.+++.+... ......+|
T Consensus 261 ~~g~~~v~~g~lt-----~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~--~~~~~~~~ 333 (576)
T TIGR02204 261 WVGAHDVIAGKMS-----AGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA--HPKTLPVP 333 (576)
T ss_pred HHHHHHHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC--CCccCCcC
Confidence 11123345555 6666677777888888999999999999999999999999987655422111 11111234
Q ss_pred CCccEEEEEEEEEeCCCC-CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhh
Q 000351 1235 SSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR 1313 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR 1313 (1623)
..+.|+|+||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|
T Consensus 334 ~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~ 413 (576)
T TIGR02204 334 LRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELR 413 (576)
T ss_pred CCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHH
Confidence 456799999999997532 5799999999999999999999999999999999999999999999999999999999999
Q ss_pred hceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1314 KILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
++++|+||||.+|+|||||||.+.. +.+|++++++++.+++.++++++|.|+||.++|+|.+||||||||++||||+++
T Consensus 414 ~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~ 493 (576)
T TIGR02204 414 ARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILK 493 (576)
T ss_pred HhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999998754 568999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHH
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 1472 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~ 1472 (1623)
+|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||||++|++|+++|.|+|++++++ ++.|++|+
T Consensus 494 ~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~l~ 572 (576)
T TIGR02204 494 DAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYARLA 572 (576)
T ss_pred CCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999874 57888887
Q ss_pred HH
Q 000351 1473 QS 1474 (1623)
Q Consensus 1473 ~~ 1474 (1623)
+.
T Consensus 573 ~~ 574 (576)
T TIGR02204 573 RL 574 (576)
T ss_pred hh
Confidence 53
No 35
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.8e-67 Score=676.69 Aligned_cols=546 Identities=20% Similarity=0.268 Sum_probs=428.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 996 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ 996 (1623)
.++..+++.++..++....++.+++..|..... .....+..+++++.+...+..++..........+...+++.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 98 (585)
T TIGR01192 20 RVLLIVIANITLAAITIAEPILFGRIIDAISSK-SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGR 98 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666666666666666555432211 1111222222223333333334444444455555666677799999
Q ss_pred HhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 997 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 1076 (1623)
Q Consensus 997 ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~ 1076 (1623)
+++.|+.||+++++|++++|+++|++.+...+...+...+..++.++..+++++..+|.+.++++.++++++.+...+.+
T Consensus 99 l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~ 178 (585)
T TIGR01192 99 IISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQ 178 (585)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777777777777777777778888888877766666666666666666
Q ss_pred HHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Q 000351 1077 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL---MIW 1153 (1623)
Q Consensus 1077 ~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~---~~~ 1153 (1623)
..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..+.......+......++..+ +++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 258 (585)
T TIGR01192 179 RTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCIL 258 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66776666677778889999999999999999999999888888877766655544333333332222222222 222
Q ss_pred HHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCC
Q 000351 1154 LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGW 1233 (1623)
Q Consensus 1154 ~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~w 1233 (1623)
+++.+. ...+..+ .+.+..++.++..+..++..+...+..+.....+.+|+.+..+.+++... ...+ ..+
T Consensus 259 ~~g~~~-v~~g~it-----~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~~-~~~ 328 (585)
T TIGR01192 259 VIGTVL-VIKGELS-----VGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE---PADA-PEL 328 (585)
T ss_pred HHHHHH-HHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CccC-CCC
Confidence 222222 3345555 55565666777777888888888888888889999999998875543211 1111 112
Q ss_pred -CCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh
Q 000351 1234 -PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1234 -p~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1312 (1623)
+..+.|+++||+|+|+++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||+|+.+++.+.+
T Consensus 329 ~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~ 407 (585)
T TIGR01192 329 PNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESL 407 (585)
T ss_pred CCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHH
Confidence 234679999999999754 369999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhh
Q 000351 1313 RKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1391 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL 1391 (1623)
|+++++|||||.+|++|+|+||..+. +.+|++++++++.+++++++.++|+|+||.++++|.+||||||||++|||||+
T Consensus 408 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall 487 (585)
T TIGR01192 408 RKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAIL 487 (585)
T ss_pred HhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998763 56899999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHH
Q 000351 1392 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 1471 (1623)
Q Consensus 1392 ~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l 1471 (1623)
++|+|||||||||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++++++ ++.|+++
T Consensus 488 ~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l 566 (585)
T TIGR01192 488 KNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKL 566 (585)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHH
Confidence 999999999999999999999999999998889999999999999999999999999999999999999975 4789998
Q ss_pred HHHh
Q 000351 1472 VQST 1475 (1623)
Q Consensus 1472 ~~~~ 1475 (1623)
++..
T Consensus 567 ~~~~ 570 (585)
T TIGR01192 567 LRRS 570 (585)
T ss_pred HHhC
Confidence 8654
No 36
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.5e-68 Score=678.45 Aligned_cols=508 Identities=21% Similarity=0.283 Sum_probs=411.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHH
Q 000351 956 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 1035 (1623)
Q Consensus 956 ~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~ 1035 (1623)
+..+++++.++..++.++..++....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+...+...+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44455555556666777777777888899999999999999999999999999999999999999999987666666666
Q ss_pred HHHHHHHhhHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHH
Q 000351 1036 MGQVSQLLSTFVLI-GIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR 1114 (1623)
Q Consensus 1036 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~ 1114 (1623)
+..+...+..++++ ++.+|.+.++++..+++++.+...+.+..++..+......+.+.+.+.|+++|+.+||+|+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 66655555444444 45667665555444444444455554444444445555667888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 000351 1115 MADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW--LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTA 1192 (1623)
Q Consensus 1115 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~ 1192 (1623)
+.+++.+..+...+..........+.......+..+..+ +..+...+..+..+ .+.+..++.+...+..++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt-----~g~l~a~~~~~~~~~~pl~~ 272 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLT-----LGQLTSFVMYLGLMIWPMLA 272 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcC-----HHHHHHHHHHHHHHHHHHHH
Confidence 999888887776666555444433333322222221111 11111223355555 55555566677777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEe
Q 000351 1193 VLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIV 1272 (1623)
Q Consensus 1193 ~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIv 1272 (1623)
+...+..+.....+.+|+.++.+.+++.+.. ....+ +..+.|+++||+|+|+++.+++|+|+||+|+|||++||+
T Consensus 273 l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~iv 347 (569)
T PRK10789 273 LAWMFNIVERGSAAYSRIRAMLAEAPVVKDG--SEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGIC 347 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCC--CCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEE
Confidence 8888999999999999999998865442111 11111 234679999999999765457999999999999999999
Q ss_pred cCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHH
Q 000351 1273 GRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALER 1351 (1623)
Q Consensus 1273 GrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~ 1351 (1623)
||||||||||+++|.|+++|++|+|.+||.|+++++.+++|+++++|||+|.+|++|+|+||..+ .+.+|++++++++.
T Consensus 348 G~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~ 427 (569)
T PRK10789 348 GPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARL 427 (569)
T ss_pred CCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876 35799999999999
Q ss_pred hcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEee
Q 000351 1352 AHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1431 (1623)
Q Consensus 1352 ~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~Ia 1431 (1623)
+++++++.++|+|+||.++++|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||
T Consensus 428 ~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~it 507 (569)
T PRK10789 428 ASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISA 507 (569)
T ss_pred cCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987899999999
Q ss_pred cCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHH
Q 000351 1432 HRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1432 Hrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~ 1474 (1623)
||++++..||+|++|++|+++|.|+|++|+++ .+.|+++++.
T Consensus 508 H~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~ 549 (569)
T PRK10789 508 HRLSALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRY 549 (569)
T ss_pred cchhHHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHH
Confidence 99999999999999999999999999999975 4689988865
No 37
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.8e-67 Score=687.75 Aligned_cols=539 Identities=22% Similarity=0.274 Sum_probs=456.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 293 RALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRL 372 (1623)
Q Consensus 293 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i 372 (1623)
+..++.+++.++..++..++..++.++.|++++.+++.+.........+.++++++++.++..++.....+...+++.++
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKL 225 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777888888999999999999999999997764333222334444455555566666666677788899999
Q ss_pred HHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000351 373 RSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLV 451 (1623)
Q Consensus 373 r~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~ 451 (1623)
...++..+|+|.++++....++.++|+++++++.| +.+.+++. .+..+....+.+++.+++++...++.+++.++.++
T Consensus 226 ~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 304 (710)
T TIGR03796 226 AVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAA 304 (710)
T ss_pred HHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998899999999999988 67887653 45556666666677777777777777888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 452 FMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILN 531 (1623)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~ 531 (1623)
+.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++...++.+...+..........+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (710)
T TIGR03796 305 INVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPT 384 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888899999999999999999999999999999999999999999999988888877776666655554444
Q ss_pred HHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC----
Q 000351 532 SIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPN---- 605 (1623)
Q Consensus 532 ~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~---- 605 (1623)
....+ +.++.+|++.+..|.+|.+.+++++.++..+..|+..++..+..+.++.++++||.++++.++......
T Consensus 385 ~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~ 464 (710)
T TIGR03796 385 LLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAP 464 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccc
Confidence 43332 334566777778899999999999999999999999999999999999999999999998764422111
Q ss_pred ---CCC-CCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----
Q 000351 606 ---PPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---- 677 (1623)
Q Consensus 606 ---~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---- 677 (1623)
... ......|+++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+
T Consensus 465 ~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G-~I~idg~~ 542 (710)
T TIGR03796 465 AAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG-EILFDGIP 542 (710)
T ss_pred ccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-EEEECCEe
Confidence 000 1123469999999999853 46899999999999999999999999999999999999999999 5443
Q ss_pred ---------cCcEEEEccCcccCcccHHHHHhcCC-CCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 678 ---------RGTVAYVPQVSWIFNATVRDNILFGS-AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 678 ---------~~~iay~~Q~~~l~~~Tv~enI~~g~-~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
++.|+||||+|++|++||||||.++. +.+++++.++++.+++.++++.+|+|++|.+||+|.+|||||||
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQ 622 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQ 622 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHH
Confidence 45799999999999999999999875 47889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHh
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
||+||||++++|+|+|||||||+||+++++.+++.+.. .++|+|+|||+++.+..||+|++|++|+|+++|+|++++
T Consensus 623 RiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll 699 (710)
T TIGR03796 623 RLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELW 699 (710)
T ss_pred HHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHH
Confidence 99999999999999999999999999999999998754 589999999999999999999999999999999999999
Q ss_pred hcChhHHHhH
Q 000351 828 NNGELFQKLM 837 (1623)
Q Consensus 828 ~~~~~~~~~~ 837 (1623)
+.++.|++++
T Consensus 700 ~~~~~y~~l~ 709 (710)
T TIGR03796 700 AVGGAYARLI 709 (710)
T ss_pred HcCCcHHHHh
Confidence 8888887764
No 38
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.9e-66 Score=680.64 Aligned_cols=537 Identities=20% Similarity=0.265 Sum_probs=435.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 296 NSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRST 375 (1623)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~ 375 (1623)
.+..++.++..+++.++..++..+.|++++++++.+........-...++.+++..++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667788888999999999999999999998864332111111122222333333444333334445566777778
Q ss_pred HHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000351 376 LVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMF 454 (1623)
Q Consensus 376 L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~ 454 (1623)
++..+|++.++.+....++.++|+++|++++|++.+.+.+ ..+..++...+.+++++++++..-+..+++.++.+++.+
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8889999999999998889999999999999999999865 355666777777777777777666666666666666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 455 PVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIP 534 (1623)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~ 534 (1623)
.+..++.++.++..++..+..++..+.+.|.++|+++||.|++|+.+.+++++..++..+..++..........+.....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888889999999999999999999999999999999998888877776655554444333333332222222
Q ss_pred --HHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC-CCCCC
Q 000351 535 --VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP-PLTSG 611 (1623)
Q Consensus 535 --~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~-~~~~~ 611 (1623)
..+.++.+|.+.+..+.++++.+++++.++..+..|+..++..+..+.++.++.+||.++++.++....... ...+.
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~ 475 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAPLNL 475 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Confidence 123345567777778999999999999999999999999999999999999999999999987654321111 11122
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------- 678 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------- 678 (1623)
...|+++|++|+|++.+++++|+|+||+|++||+++||||||||||||+++|+|+++|++| .+.+.
T Consensus 476 ~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G-~I~idg~~i~~~~~~~lr 554 (711)
T TIGR00958 476 EGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGG-QVLLDGVPLVQYDHHYLH 554 (711)
T ss_pred CCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCC-EEEECCEEHHhcCHHHHH
Confidence 3469999999999854457899999999999999999999999999999999999999999 55443
Q ss_pred CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000351 679 GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 757 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~ 757 (1623)
++|+||||+|++|++||||||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||++||||+++
T Consensus 555 ~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~ 634 (711)
T TIGR00958 555 RQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVR 634 (711)
T ss_pred hhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhc
Confidence 36999999999999999999999964 67889999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHh
Q 000351 758 NSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKL 836 (1623)
Q Consensus 758 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 836 (1623)
+|+|+|||||||+||+++++.|.+ . ...+++|+|+|||+++.+..||+|++|++|+|+++|+|+||+++++.|+++
T Consensus 635 ~p~ILILDEpTSaLD~~te~~i~~-~--~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 635 KPRVLILDEATSALDAECEQLLQE-S--RSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred CCCEEEEEccccccCHHHHHHHHH-h--hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 999999999999999999999987 2 234789999999999999999999999999999999999999888777654
No 39
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.9e-67 Score=670.73 Aligned_cols=515 Identities=24% Similarity=0.293 Sum_probs=412.2
Q ss_pred HHHHHHHHHHHHhhhhchhhhhcccCc-cCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 921 LLLCYFLTETLRVSSSTWLSYWTDQSS-LKTH--GPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 997 (1623)
Q Consensus 921 ~~~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~--~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~l 997 (1623)
.+++.++..++....++.+++..|... .... ....+..+++++.++..++.+++.+.....+.+...+++.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 87 (529)
T TIGR02857 8 LGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAV 87 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555555444331 1111 1123455566667777888888899999999999999999999999
Q ss_pred hcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 998 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 1077 (1623)
Q Consensus 998 l~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~ 1077 (1623)
++.|..+|++.++|++++|+++|++.++..+...+..++..+..++..+++++..+|++.++++..+++...+...+.+.
T Consensus 88 ~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~ 167 (529)
T TIGR02857 88 AALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWA 167 (529)
T ss_pred HhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888878888888777777788888888876665544443333333334444
Q ss_pred HHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000351 1078 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL--- 1154 (1623)
Q Consensus 1078 ~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~--- 1154 (1623)
.+...+......+...+.+.|+++|+.+||+|+.++++.+++.+..++..+..........+......++..+..++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (529)
T TIGR02857 168 AQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAV 247 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555667888999999999999999999999999988887777666555555555555444444333222
Q ss_pred HHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCC
Q 000351 1155 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 1234 (1623)
Q Consensus 1155 ~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp 1234 (1623)
.+++.+ ..+..+ .+.+...+.++..+..++..+...+..+.....+.+|+.++.+.+++... .. +...+
T Consensus 248 ~~~~~~-~~g~~t-----~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~---~~--~~~~~ 316 (529)
T TIGR02857 248 YIGFRL-LAGDLD-----LATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG---KA--PVTAA 316 (529)
T ss_pred HHHHHH-HcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---Cc--CCCCC
Confidence 222222 244454 45555566677778888888888999999999999999999875433211 11 11122
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
..+.|+|+||+|+|+++.+++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||.|+++++.+++|+
T Consensus 317 ~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 34679999999999765457999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+++||||||.+|++||||||.... +.+|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998754 5789999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEE
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLL 1446 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl 1446 (1623)
|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||+|+||
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999986
No 40
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.2e-68 Score=640.37 Aligned_cols=463 Identities=25% Similarity=0.404 Sum_probs=354.9
Q ss_pred CcEEEEeeEEEcCCCCCC-CccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCC----CCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAER-PTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV----SDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~-~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~----~g~~~~~---------- 677 (1623)
+.++++|++..|....+. ++++||||+|.+||++||||.|||||||+.++|.|.+++. +| .+..
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G-~I~~~g~dl~~l~~ 82 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSG-EVILDGRDLLGLSE 82 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccce-EEEECCcchhcCCH
Confidence 368999999999754222 5999999999999999999999999999999999999876 45 4322
Q ss_pred -------cCcEEEEccCccc-Cc--ccHHHHHhc----CCCC-C---HHHHHHHHHHhCchhHHhcCCCCCcccccCCCC
Q 000351 678 -------RGTVAYVPQVSWI-FN--ATVRDNILF----GSAF-E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 739 (1623)
Q Consensus 678 -------~~~iay~~Q~~~l-~~--~Tv~enI~~----g~~~-~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~ 739 (1623)
.+.|||++|+|+= +| .||.+-|.= .... . .++..+.++..++.+.... .....
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 2359999999973 54 477776642 2212 1 2333445566676654443 22335
Q ss_pred ccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000351 740 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 817 (1623)
Q Consensus 740 ~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 817 (1623)
.|||||||||.||+||..+|+++|+||||++||+.+..+|.+.+.... ..|.++|+||||+..+.+ ||+|+||++|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 899999999999999999999999999999999999999998665533 359999999999999865 899999999999
Q ss_pred EEecChhHHhhcCh--hHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhh
Q 000351 818 KEEGTFEDLSNNGE--LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEER 895 (1623)
Q Consensus 818 ~~~g~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 895 (1623)
+|.|+.+++.++.. +-+.++.... ..
T Consensus 234 VE~G~~~~i~~~p~hpYT~~Ll~a~p----------------------~~------------------------------ 261 (539)
T COG1123 234 VETGPTEEILSNPQHPYTRGLLAAVP----------------------RL------------------------------ 261 (539)
T ss_pred EEecCHHHHHhccCCcccHHHHhhCC----------------------Cc------------------------------
Confidence 99999999875421 0000000000 00
Q ss_pred hcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 000351 896 ETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANS 975 (1623)
Q Consensus 896 ~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~ 975 (1623)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHH
Q 000351 976 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTM 1055 (1623)
Q Consensus 976 ~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1623)
...
T Consensus 262 ------------------------------~~~----------------------------------------------- 264 (539)
T COG1123 262 ------------------------------GDE----------------------------------------------- 264 (539)
T ss_pred ------------------------------ccc-----------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1056 SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG 1135 (1623)
Q Consensus 1056 ~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~ 1135 (1623)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000351 1136 ANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIE 1215 (1623)
Q Consensus 1136 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~ 1215 (1623)
. ...
T Consensus 265 -------------------------------~---------------------------------------------~~~ 268 (539)
T COG1123 265 -------------------------------K---------------------------------------------IIR 268 (539)
T ss_pred -------------------------------c---------------------------------------------ccc
Confidence 0 000
Q ss_pred CCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCC---------CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHh
Q 000351 1216 LPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTL 1286 (1623)
Q Consensus 1216 ~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL 1286 (1623)
.+.+. +. +...-++++|++++|.. ....+++||||+|++||.+||||+||||||||.++|
T Consensus 269 ~~~~~--------~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i 337 (539)
T COG1123 269 LPRRG--------PL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARIL 337 (539)
T ss_pred ccccc--------cc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHH
Confidence 00000 00 01124889999999963 124689999999999999999999999999999999
Q ss_pred hccccCCCcEEEECCEe--cCCCChHHhhhceEEEcCCCc--cc-cccHHhhcC-CCC---CC----CHHHHHHHHHHhc
Q 000351 1287 FRIVELERGRILIDGFD--IAKFGLMDLRKILGIIPQSPV--LF-SGTVRFNLD-PFS---EH----SDADLWEALERAH 1353 (1623)
Q Consensus 1287 ~rl~~p~~G~I~IdG~d--i~~i~~~~lR~~i~~vpQdp~--Lf-~gTIr~NLd-~~~---~~----sd~~i~~aL~~~~ 1353 (1623)
+|+++|++|+|.++|.| .+.-.....|+++-+|+|||+ |- ..||+++|. |.. .. ..+.+-+.++.++
T Consensus 338 ~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~Vg 417 (539)
T COG1123 338 AGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVG 417 (539)
T ss_pred hCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcC
Confidence 99999999999999977 333334567889999999997 33 349999985 322 11 1233566677776
Q ss_pred HHH-HHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEe
Q 000351 1354 LKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLII 1430 (1623)
Q Consensus 1354 l~~-~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~I 1430 (1623)
|.. +..+ ....||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|++..+ |.|.|+|
T Consensus 418 L~~~~l~r-----------yP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfI 486 (539)
T COG1123 418 LPPEFLDR-----------YPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFI 486 (539)
T ss_pred CCHHHHhc-----------CchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 653 3333 4467999999999999999999999999999999999999999999988653 6899999
Q ss_pred ecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHHHHH
Q 000351 1431 AHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 1472 (1623)
Q Consensus 1431 aHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~ 1472 (1623)
||++..+.. ||||+||++|+|||.|+.++..+++...|.+..
T Consensus 487 SHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L 529 (539)
T COG1123 487 SHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKL 529 (539)
T ss_pred eCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHH
Confidence 999999998 999999999999999999999988777666554
No 41
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=9.7e-66 Score=675.66 Aligned_cols=533 Identities=23% Similarity=0.325 Sum_probs=447.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 292 LRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFR 371 (1623)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 371 (1623)
++..++.+++.+...++..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (694)
T TIGR03375 138 FWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKK 217 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677888888888899999999999999999999875433222223344444445555666666666777889999
Q ss_pred HHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000351 372 LRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLL 450 (1623)
Q Consensus 372 ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~ 450 (1623)
+...++..+|+|.++++... .+.++|++++++ +|++.+.+++. .+.......+.+++.+++++...++.+++.++++
T Consensus 218 ~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 295 (694)
T TIGR03375 218 ADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAI 295 (694)
T ss_pred HHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999876 677899999999 79999998764 3333444444444555556666677788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 451 VFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFIL 530 (1623)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~ 530 (1623)
++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+..........+.
T Consensus 296 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (694)
T TIGR03375 296 PLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFA 375 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999999999999999999999999999888887777776666555554
Q ss_pred HHHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--
Q 000351 531 NSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP-- 606 (1623)
Q Consensus 531 ~~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~-- 606 (1623)
.....+ +.++.+|++.+..|.+|++.+++++.++..+..|+..++..+..+.++.++++|+.++++.++.......
T Consensus 376 ~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~ 455 (694)
T TIGR03375 376 QFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTRFL 455 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC
Confidence 443332 3345667777788899999999999999999999999999999999999999999999987653221111
Q ss_pred CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------
Q 000351 607 PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------- 678 (1623)
Q Consensus 607 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------- 678 (1623)
........|+++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+.
T Consensus 456 ~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G-~I~idg~~l~~~~ 533 (694)
T TIGR03375 456 HRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEG-SVLLDGVDIRQID 533 (694)
T ss_pred CCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-eEEECCEEhhhCC
Confidence 111123469999999999743 46899999999999999999999999999999999999999999 54443
Q ss_pred -----CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 679 -----GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 679 -----~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
..|+||||+|++|++||+|||.++++ .+++++.++++.+++.++++.+|+|++|.+||+|.+||||||||++||
T Consensus 534 ~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalA 613 (694)
T TIGR03375 534 PADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALA 613 (694)
T ss_pred HHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999976 789999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||++++|+++|||||||+||+++++.|.+.+ ....+++|+|+||||++.+..||+|++|++|+++++|+|+|+++.
T Consensus 614 Rall~~p~iliLDE~Ts~LD~~te~~i~~~l-~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 614 RALLRDPPILLLDEPTSAMDNRSEERFKDRL-KRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 9999999999999999999999999998865 445578999999999999999999999999999999999999753
No 42
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-68 Score=684.95 Aligned_cols=483 Identities=22% Similarity=0.321 Sum_probs=350.9
Q ss_pred CCcEEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE--------------
Q 000351 612 LPAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------- 676 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~-------------- 676 (1623)
++.++++|++++|+... +.++|+||||++++||+++|+|+||||||||+++|+|+++|++|....
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 35799999999996322 347999999999999999999999999999999999999998884221
Q ss_pred -----------E-cCcEEEEccCc--ccC-cccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCccc
Q 000351 677 -----------I-RGTVAYVPQVS--WIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTE 733 (1623)
Q Consensus 677 -----------~-~~~iay~~Q~~--~l~-~~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ 733 (1623)
. +..|||++|+| .++ ..||+|||.++. ..+. ++..++++..++.+. ...
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~ 161 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTI 161 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhH
Confidence 0 12599999998 455 579999998752 1222 234445555555310 011
Q ss_pred ccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEE
Q 000351 734 IGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIIL 811 (1623)
Q Consensus 734 ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~ 811 (1623)
......+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.+.....+ |+|+|+|||+++++. .||+|++
T Consensus 162 ~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 162 LSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred HhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 23345689999999999999999999999999999999999999998855443333 899999999999875 5899999
Q ss_pred EeCCEEEEecChhHHhhcCh-hH-HHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhh
Q 000351 812 VHEGMVKEEGTFEDLSNNGE-LF-QKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVL 889 (1623)
Q Consensus 812 l~~G~i~~~g~~~~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1623)
|++|++++.|+++++..... .| ..+... .+.
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~~~~l~~~----------------------~~~------------------------- 274 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPYTRALLAA----------------------VPQ------------------------- 274 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChhhhhhhhc----------------------cCc-------------------------
Confidence 99999999998877642110 00 000000 000
Q ss_pred hhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHH
Q 000351 890 IKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVL 969 (1623)
Q Consensus 890 ~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~ 969 (1623)
. ..+....
T Consensus 275 ----------------------~---------------------------~~~~~~~----------------------- 282 (623)
T PRK10261 275 ----------------------L---------------------------GAMKGLD----------------------- 282 (623)
T ss_pred ----------------------c---------------------------ccccccc-----------------------
Confidence 0 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHH
Q 000351 970 VTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLI 1049 (1623)
Q Consensus 970 ~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~ 1049 (1623)
.| +. + ...
T Consensus 283 ------------------------------~~---------~~----~----~~~------------------------- 290 (623)
T PRK10261 283 ------------------------------YP---------RR----F----PLI------------------------- 290 (623)
T ss_pred ------------------------------CC---------cc----c----ccc-------------------------
Confidence 00 00 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000351 1050 GIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRY 1129 (1623)
Q Consensus 1050 ~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~ 1129 (1623)
...
T Consensus 291 -----------------------------------~~~------------------------------------------ 293 (623)
T PRK10261 291 -----------------------------------SLE------------------------------------------ 293 (623)
T ss_pred -----------------------------------ccc------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1130 TLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVER 1209 (1623)
Q Consensus 1130 ~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveR 1209 (1623)
.....
T Consensus 294 ---------------------------------~~~~~------------------------------------------ 298 (623)
T PRK10261 294 ---------------------------------HPAKQ------------------------------------------ 298 (623)
T ss_pred ---------------------------------ccccc------------------------------------------
Confidence 00000
Q ss_pred HHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCC---------CCCcccceeeEeCCCCEEEEecCCCCChh
Q 000351 1210 VGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE---------LPPVLHGLSFTIPPSDKVGIVGRTGAGKS 1280 (1623)
Q Consensus 1210 i~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrsGSGKS 1280 (1623)
. +.+.+. ..+ +....|+++|++++|+.. ..++|+||||+|++||++||+|+||||||
T Consensus 299 -----~-~~~~~~-----~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKS 364 (623)
T PRK10261 299 -----E-PPIEQD-----TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKS 364 (623)
T ss_pred -----C-cccccc-----ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHH
Confidence 0 000000 000 011248999999999521 13699999999999999999999999999
Q ss_pred hHHHHhhccccCCCcEEEECCEecCCCChH---HhhhceEEEcCCC--ccccc-cHHhhcCC-C---CCCCH----HHHH
Q 000351 1281 SMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKILGIIPQSP--VLFSG-TVRFNLDP-F---SEHSD----ADLW 1346 (1623)
Q Consensus 1281 TLl~lL~rl~~p~~G~I~IdG~di~~i~~~---~lR~~i~~vpQdp--~Lf~g-TIr~NLd~-~---~~~sd----~~i~ 1346 (1623)
||+++|.|+++|++|+|.++|.++...+.. .+|++|+||||+| .++.. ||++|+.. . +.... +++.
T Consensus 365 TLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~ 444 (623)
T PRK10261 365 TTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVA 444 (623)
T ss_pred HHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 999999999999999999999999877643 3577899999998 36654 99999852 1 11111 2344
Q ss_pred HHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--C
Q 000351 1347 EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--S 1424 (1623)
Q Consensus 1347 ~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~ 1424 (1623)
+.|+.+++.+ .........||||||||++|||||+.+|+||||||||++||+.+.+.|.+.|++..+ +
T Consensus 445 ~~L~~~gL~~----------~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g 514 (623)
T PRK10261 445 WLLERVGLLP----------EHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFG 514 (623)
T ss_pred HHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 4555554421 223334467999999999999999999999999999999999999999999988643 7
Q ss_pred cEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1425 CTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1425 ~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
.|||+|||+++.+.. ||||++|++|+|++.|+++++..++...|.
T Consensus 515 ~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~ 560 (623)
T PRK10261 515 IAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYT 560 (623)
T ss_pred CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHH
Confidence 899999999999987 999999999999999999999876544443
No 43
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.1e-65 Score=673.92 Aligned_cols=539 Identities=21% Similarity=0.305 Sum_probs=445.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 294 ALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLR 373 (1623)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir 373 (1623)
..++.+++.++..++..++..++.++.|++++.++|.+........-+.++++++++.++..++.....+...+.+.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677788888888999999999999999999987543322222333344444555556666666667778889999
Q ss_pred HHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000351 374 STLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVF 452 (1623)
Q Consensus 374 ~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~ 452 (1623)
..++..+|+|.++++....++.++|+++++++ |++.+.+++. .+.......+.+++.+++++...++.+++.++++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l 307 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLSIPV 307 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999989999999999998 9999998653 333334444444455555555556667777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 453 MFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNS 532 (1623)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~ 532 (1623)
.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+..........+...
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (708)
T TIGR01193 308 YAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAV 387 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888889999999999999999999999999999999999999999998887777666655555444444333333
Q ss_pred HHH--HHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC--CCC
Q 000351 533 IPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPN--PPL 608 (1623)
Q Consensus 533 ~~~--~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~--~~~ 608 (1623)
... .+.++.+|++.+..|.+|++.++++..++..+..|+..+...+..+.++.++++||.++++.++...... ...
T Consensus 388 ~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~ 467 (708)
T TIGR01193 388 TKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKRTEL 467 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCC
Confidence 222 2345567788888899999999999999999999999999999999999999999999998664422111 111
Q ss_pred CCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc----------
Q 000351 609 TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR---------- 678 (1623)
Q Consensus 609 ~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~---------- 678 (1623)
......|+++|++|+|++ ++++|+|+||+|++|+.++|+|+||||||||+++|+|+++|++| .+.++
T Consensus 468 ~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G-~I~idg~~i~~~~~~ 544 (708)
T TIGR01193 468 NNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSG-EILLNGFSLKDIDRH 544 (708)
T ss_pred CCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCc-EEEECCEEHHHcCHH
Confidence 122346999999999973 46899999999999999999999999999999999999999999 55443
Q ss_pred ---CcEEEEccCcccCcccHHHHHhcCC--CCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 679 ---GTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 679 ---~~iay~~Q~~~l~~~Tv~enI~~g~--~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
+.||||||+|++|++||+|||.++. ..+++++.++++.+++.++++.+|+|++|.+||+|.+|||||||||+|||
T Consensus 545 ~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialAR 624 (708)
T TIGR01193 545 TLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALAR 624 (708)
T ss_pred HHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHH
Confidence 4699999999999999999999983 46789999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhH
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELF 833 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 833 (1623)
|++++|+|+|||||||+||+++++.+.+.+.. .+|+|+|+|||+++.+..||+|++|++|+++++|+|+++++..+.|
T Consensus 625 all~~p~iliLDE~Ts~LD~~te~~i~~~L~~--~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~~~y 702 (708)
T TIGR01193 625 ALLTDSKVLILDESTSNLDTITEKKIVNNLLN--LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRNGFY 702 (708)
T ss_pred HHhhCCCEEEEeCccccCCHHHHHHHHHHHHH--hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcCCcH
Confidence 99999999999999999999999999987764 3689999999999999999999999999999999999999888888
Q ss_pred HHhHH
Q 000351 834 QKLME 838 (1623)
Q Consensus 834 ~~~~~ 838 (1623)
+++++
T Consensus 703 ~~l~~ 707 (708)
T TIGR01193 703 ASLIH 707 (708)
T ss_pred HHHhh
Confidence 87653
No 44
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.1e-65 Score=657.76 Aligned_cols=544 Identities=21% Similarity=0.240 Sum_probs=445.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 293 RALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRL 372 (1623)
Q Consensus 293 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i 372 (1623)
+..++.+++.++..++..++..++..+.|++++.+++.+...........++..+++..++..++.....+...+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777777788888888999999999987764322211112222233344444555555555667788889
Q ss_pred HHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000351 373 RSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVASLLGALLLV 451 (1623)
Q Consensus 373 r~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~ 451 (1623)
...++..+|+|.++++.....+.+.|++++++++|++.+.+.+ ..+..++..++.+++.+++++...++.+++.+++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 176 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAP 176 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999854 455666777777777777777666666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 452 FMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILN 531 (1623)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~ 531 (1623)
+.+.+..++.+++++..++.++..++..+...|.++|+++||.++.|+.+.+++++..++-.+...+..........+..
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T PRK11176 177 IVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667778888888889999999999999999999999999999999999999888777766666665555554444444
Q ss_pred HHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCC
Q 000351 532 SIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLT 609 (1623)
Q Consensus 532 ~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 609 (1623)
.+..+ +.++.++.+.+..|.++++.+.++++++..+..|+..+...+..+.++..+++|+.++++.++..........
T Consensus 257 ~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~ 336 (582)
T PRK11176 257 LIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKRVIE 336 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcCCC
Confidence 33322 3334556666677899999999999999999999999999999999999999999999986543221111111
Q ss_pred CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------
Q 000351 610 SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------ 677 (1623)
Q Consensus 610 ~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------ 677 (1623)
+....|+++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+
T Consensus 337 ~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G-~I~i~g~~i~~~~~~~ 414 (582)
T PRK11176 337 RAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEG-EILLDGHDLRDYTLAS 414 (582)
T ss_pred CCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCc-eEEECCEEhhhcCHHH
Confidence 222359999999999753 46899999999999999999999999999999999999999998 4443
Q ss_pred -cCcEEEEccCcccCcccHHHHHhcCC--CCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 678 -RGTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 678 -~~~iay~~Q~~~l~~~Tv~enI~~g~--~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
++.|+||||+|.+|++||+|||.+|. ++++++++++++.+++.++++.+|+|++|.+|++|.+||||||||++||||
T Consensus 415 ~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARa 494 (582)
T PRK11176 415 LRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARA 494 (582)
T ss_pred HHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHH
Confidence 34699999999999999999999985 378999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHH
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQ 834 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 834 (1623)
++++|+|+||||||||||+++++.+++.+.. ..+++|+|+|||+++.++.||+|++|++|+++++|+++++++.++.|+
T Consensus 495 ll~~~~ililDEptsaLD~~t~~~i~~~l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~y~ 573 (582)
T PRK11176 495 LLRDSPILILDEATSALDTESERAIQAALDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNGVYA 573 (582)
T ss_pred HHhCCCEEEEECccccCCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCChHH
Confidence 9999999999999999999999999986644 456899999999999999999999999999999999999999988898
Q ss_pred HhHHh
Q 000351 835 KLMEN 839 (1623)
Q Consensus 835 ~~~~~ 839 (1623)
++...
T Consensus 574 ~l~~~ 578 (582)
T PRK11176 574 QLHKM 578 (582)
T ss_pred HHHHH
Confidence 88753
No 45
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.3e-64 Score=653.26 Aligned_cols=543 Identities=23% Similarity=0.288 Sum_probs=454.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 293 RALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRL 372 (1623)
Q Consensus 293 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~i 372 (1623)
+.+++.+++.++.++++.++..++...+|++++.+++..........-+.+++++++..++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKV 85 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888999999999999999999999999986654332222222233334444455555555556677888899
Q ss_pred HHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000351 373 RSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLV 451 (1623)
Q Consensus 373 r~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~ 451 (1623)
...++..+|+|.++.+....++.+.|++++++++|++.+.+.+. .+..++...+.+++++++++..-++.+++.+++++
T Consensus 86 ~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~ 165 (571)
T TIGR02203 86 VRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLP 165 (571)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999988899999999999999999998664 55666767777777777777776777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 452 FMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILN 531 (1623)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~ 531 (1623)
+.+.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+..
T Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (571)
T TIGR02203 166 VLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQ 245 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888899999999999999999999999999999999999999999999988888777766666555555444444
Q ss_pred HHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCC
Q 000351 532 SIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLT 609 (1623)
Q Consensus 532 ~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 609 (1623)
....+ +.++.+|.+.+..+.+|++.+++++.++..+..|+..+...+..+.+++++++||.++++.++..........
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~ 325 (571)
T TIGR02203 246 LIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTRAIE 325 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 33322 3345566677778999999999999999999999999999999999999999999999986554321111111
Q ss_pred CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------
Q 000351 610 SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR----------- 678 (1623)
Q Consensus 610 ~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~----------- 678 (1623)
+....|+++|++|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++| .+.+.
T Consensus 326 ~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G-~I~i~g~~i~~~~~~~ 403 (571)
T TIGR02203 326 RARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSG-QILLDGHDLADYTLAS 403 (571)
T ss_pred CCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCC-eEEECCEeHHhcCHHH
Confidence 223469999999999753 46899999999999999999999999999999999999999999 55443
Q ss_pred --CcEEEEccCcccCcccHHHHHhcCC--CCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 679 --GTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 679 --~~iay~~Q~~~l~~~Tv~enI~~g~--~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
+.|+||||+|++|++||||||.++. +.++++++++++.|++.++++.+|+|.+|.+|++|.+||||||||++||||
T Consensus 404 ~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARa 483 (571)
T TIGR02203 404 LRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARA 483 (571)
T ss_pred HHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHH
Confidence 3599999999999999999999985 488999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHH
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQ 834 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 834 (1623)
++++|+|+|||||||+||+++++.|.+.+.. ..+++|+|+|||+.+.++.||+|++|++|++++.|+++++.+..+.|+
T Consensus 484 ll~~~~illLDEpts~LD~~~~~~i~~~L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~~~ 562 (571)
T TIGR02203 484 LLKDAPILILDEATSALDNESERLVQAALER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGLYA 562 (571)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCHHH
Confidence 9999999999999999999999999886654 457899999999999999999999999999999999999998877777
Q ss_pred HhHH
Q 000351 835 KLME 838 (1623)
Q Consensus 835 ~~~~ 838 (1623)
++..
T Consensus 563 ~~~~ 566 (571)
T TIGR02203 563 QLHN 566 (571)
T ss_pred HHHH
Confidence 7654
No 46
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-64 Score=606.14 Aligned_cols=527 Identities=22% Similarity=0.322 Sum_probs=432.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 305 WGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKS 384 (1623)
Q Consensus 305 ~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i~~K~ 384 (1623)
...++.++..++...|-.++..+++.+-..+....-+.++++++++.++++++.-.-.+..++.+.++|..++..+++|.
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l 83 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKL 83 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677778888888888888887766554223345566677778888888888888999999999999999999999
Q ss_pred hcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000351 385 LRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLW---SAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQTFI 460 (1623)
Q Consensus 385 l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~---~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~~~~ 460 (1623)
.++++...++.++|++.++++.-+|.++.++. ++.... ..|+.+.++++. ....++++-++.++++...+..+
T Consensus 84 ~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~---~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 84 AKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFF---FNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998764 333333 334334333333 33345666666666666677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q 000351 461 ISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSI---PVLV 537 (1623)
Q Consensus 461 ~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~---~~~~ 537 (1623)
++..++..+++++....-.+..-+.|+|+.++|.|+..+...++|.+..++-.+...+..+....++++..+. .+.+
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999988888886655544444333333333333333332 2333
Q ss_pred HHHHHHHHHHhC-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCC-CCCCCCc-
Q 000351 538 TVVSFGMFTLLG-GDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPP-LTSGLPA- 614 (1623)
Q Consensus 538 ~~~~f~~~~~~~-~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~-~~~~~~~- 614 (1623)
.++.++ +.+.+ |+++....+.++.+...+..|++.+...++.-.++.++.+.+..|++.|......... .....+.
T Consensus 241 vAv~~g-~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (559)
T COG4988 241 VAVYIG-FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPI 319 (559)
T ss_pred HHHHHH-HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCc
Confidence 333333 34456 6999999999999999999999999999999999999999999999987653222211 1122233
Q ss_pred -EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 615 -ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 615 -i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
++.+|++|.|++ ++++++|+||++++|++++|||+||||||||+++|+|+++|++| .+.++ ++
T Consensus 320 ei~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G-~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 320 EISLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQG-EIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred eeeecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCc-eEEECCccccccCHHHHHhH
Confidence 445599999985 35899999999999999999999999999999999999999999 55443 46
Q ss_pred EEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
++||||+|.||++||||||.++++ .+++++.++++.+++.+.++. |+|.+|.+||+|.+|||||+|||+||||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999987 678999999999999999999 999999999999999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHh
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 839 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 839 (1623)
+++||||||+|||+++++.|.+.+. ...++||||+||||++.+..+|+|++|++|+++++|+|+++.++++.|++++.+
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~-~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~ 554 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQ-ELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQ 554 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHH-HHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHH
Confidence 9999999999999999999987654 456789999999999999999999999999999999999999999999999865
Q ss_pred h
Q 000351 840 A 840 (1623)
Q Consensus 840 ~ 840 (1623)
+
T Consensus 555 q 555 (559)
T COG4988 555 Q 555 (559)
T ss_pred H
Confidence 4
No 47
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-67 Score=598.76 Aligned_cols=488 Identities=25% Similarity=0.388 Sum_probs=399.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHH-HHHHH
Q 000351 976 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLI-GIVST 1054 (1623)
Q Consensus 976 ~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1054 (1623)
.++...+..+-+.+-.+.+.|+.+..+.|.-+..+|-+..-...-..-|+..+...+.+.+..++-+....++. ....|
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 34556667777788888899999999999988777765544444444455445555555555555444333333 33456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1055 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 1134 (1623)
Q Consensus 1055 ~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~ 1134 (1623)
|++.+.+..+++|.++........-..||....+.+...+.-.+++-+..|++-|+.|+.+..++.+.++.+++......
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 66666655555554443333333334566666677777888899999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1135 GANRWLAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGN 1212 (1623)
Q Consensus 1135 ~~~~wl~~~l~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~ 1212 (1623)
..-.|+.+....+............. +..+..+ .+.+-..-.+..+++.+++.+-..+.++.+.....|+..+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~T-----vgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfd 238 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLT-----VGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFD 238 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCC-----chhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHH
Confidence 77778877665544333222222211 2233333 5566666778888999999999999999999999999998
Q ss_pred hhcCCCCCCccccCCCCCCCCC-CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc
Q 000351 1213 YIELPSEAPLVIESNRPPPGWP-SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE 1291 (1623)
Q Consensus 1213 ~~~~~~e~~~~~~~~~~~~~wp-~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~ 1291 (1623)
..+.+.|. .+.+..++-|| ..|.|.|+||+|.|.+.. ++|+|+||++++|+++||||++|+||||+.++|+|+|+
T Consensus 239 Ll~~~~~v---~d~pda~~L~~~~~g~v~F~~V~F~y~~~r-~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD 314 (497)
T COG5265 239 LLDVEAEV---SDAPDAPPLWPVRLGAVAFINVSFAYDPRR-PILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYD 314 (497)
T ss_pred hhccchhh---ccCCCCccccccccceEEEEEEEeeccccc-hhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhC
Confidence 88766553 23334456675 457899999999998774 79999999999999999999999999999999999999
Q ss_pred CCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhh
Q 000351 1292 LERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVS 1370 (1623)
Q Consensus 1292 p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~ 1370 (1623)
+++|.|.|||.||..+..+.+|+.||+||||.+||+.|+..|+...+ ..+++|++.|++.++++++|+.+|+||||.||
T Consensus 315 ~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vg 394 (497)
T COG5265 315 VNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVG 394 (497)
T ss_pred CcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccc
Confidence 99999999999999999999999999999999999999999998554 67999999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCce
Q 000351 1371 EAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGR 1450 (1623)
Q Consensus 1371 e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1450 (1623)
|+|-.||||||||+++||++|++|+||+||||||+||..||+.||.+|++.++++|.++|||||+||.++|.|+||++|+
T Consensus 395 erglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~ 474 (497)
T COG5265 395 ERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGR 474 (497)
T ss_pred hheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecChhHHhhcCCChHHHHHH
Q 000351 1451 VLEYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1451 ive~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
|+|.|+|+||+++ +|.|++||.
T Consensus 475 i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 475 IVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred EEecCcHHHHHHc-CChHHHHhc
Confidence 9999999999987 789999984
No 48
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-65 Score=706.04 Aligned_cols=568 Identities=19% Similarity=0.237 Sum_probs=438.3
Q ss_pred ccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 898 GVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYW 977 (1623)
Q Consensus 898 g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~ 977 (1623)
..+++....+|..... +..+++.+++.++..++....++.+....+.... ......+...+++++++..++.+++.++
T Consensus 43 ~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 120 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASH-RKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNL-GENVNDIIFSLVLIGIFQFILSFISSFC 120 (1466)
T ss_pred ccccHHHHHhcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445544455543322 2233334444444444444444444444443211 1223345566677778888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHH
Q 000351 978 LIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSL 1057 (1623)
Q Consensus 978 ~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1623)
+...+.+...+++.+++++++++|+.|||.++.|++++|++.|++.+...+...+..++..++.+++.++++++.+|.+.
T Consensus 121 ~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~La 200 (1466)
T PTZ00265 121 MDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLT 200 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1058 WAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGAN 1137 (1623)
Q Consensus 1058 ~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 1137 (1623)
++++.++++++.+..++.+..+...+......+...+...|+++|+++||+|+.++++.+++.+..+...+..+......
T Consensus 201 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~ 280 (1466)
T PTZ00265 201 LCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFME 280 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666666666665565566666666788899999999999999999999999999888777776655544433
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHhc-------CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1138 RWLAIRLEIVGGL---MIWLTATFAVVQN-------GSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAV 1207 (1623)
Q Consensus 1138 ~wl~~~l~~~~~~---~~~~~~~~~v~~~-------~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~av 1207 (1623)
.+......++..+ +++..+...+... +..+ .+.+..++.+.+.....+..+...+..+.....|.
T Consensus 281 ~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t-----~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~ 355 (1466)
T PTZ00265 281 SLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFH-----GGSVISILLGVLISMFMLTIILPNITEYMKSLEAT 355 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222222211 1122222222221 1122 11111111111221223344555677788889999
Q ss_pred HHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCC-CCcccceeeEeCCCCEEEEecCCCCChhhHHHHh
Q 000351 1208 ERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTL 1286 (1623)
Q Consensus 1208 eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL 1286 (1623)
+|+.+.++.+++.+.. +. ....|..+.|+|+||+|+|+... .++|+|+||+|++||++|||||||||||||+++|
T Consensus 356 ~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 431 (1466)
T PTZ00265 356 NSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLI 431 (1466)
T ss_pred HHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999999865543211 11 11122335799999999997432 3699999999999999999999999999999999
Q ss_pred hccccCCCcEEEE-CCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC---------------------------
Q 000351 1287 FRIVELERGRILI-DGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--------------------------- 1338 (1623)
Q Consensus 1287 ~rl~~p~~G~I~I-dG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~--------------------------- 1338 (1623)
.|+|+|++|+|++ ||.|+++++.+++|++|++|||+|.||++||++||....
T Consensus 432 ~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1466)
T PTZ00265 432 ERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKR 511 (1466)
T ss_pred HHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccc
Confidence 9999999999999 579999999999999999999999999999999997521
Q ss_pred -------------------------------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1339 -------------------------------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1339 -------------------------------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+.+|+++++|++.+++++++.++|.|+||.++++|.+||||||||++||
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIA 591 (1466)
T PTZ00265 512 NSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIA 591 (1466)
T ss_pred ccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHH
Confidence 2467899999999999999999999999999999999999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeCc----------------
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSG---------------- 1449 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G---------------- 1449 (1623)
|||+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||++|
T Consensus 592 RAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~ 671 (1466)
T PTZ00265 592 RAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPT 671 (1466)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccc
Confidence 99999999999999999999999999999999875 479999999999999999999999986
Q ss_pred -------------------------------eEeeecChhHHhhcCCChHHHHHHHhh
Q 000351 1450 -------------------------------RVLEYDTPEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1450 -------------------------------~ive~Gtp~eLl~~~~~~f~~l~~~~~ 1476 (1623)
+|+|+|+|+||+++.+|.|+.|++.+.
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~ 729 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQK 729 (1466)
T ss_pred ccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhc
Confidence 599999999999877899999997643
No 49
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=5.4e-65 Score=693.22 Aligned_cols=219 Identities=20% Similarity=0.311 Sum_probs=187.6
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhc
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 1315 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~ 1315 (1623)
...|+++|++++|+....++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.+ +....|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533479999999999999999999999999999999999999999999999999975 45678889
Q ss_pred eEEEcCCCccccc-cHHhhcCCCC---CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~---~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
||||||++.++.. |++|||..+. ..++++ +.++++..++.++ .......||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~-----------~dk~~~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLY-----------ADRLAGTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------hcCChhhCCHHHHHHHHHH
Confidence 9999999998865 9999996432 122222 3344555555443 3334467999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
|||+.+|+||+|||||++||+.+.+.+++.|++.. +|+|||++||+++.++. ||||++|++|++++.|++++|.++.+
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g 2162 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFG 2162 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhC
Confidence 99999999999999999999999999999999864 57999999999999987 99999999999999999999987654
Q ss_pred C
Q 000351 1466 S 1466 (1623)
Q Consensus 1466 ~ 1466 (1623)
.
T Consensus 2163 ~ 2163 (2272)
T TIGR01257 2163 D 2163 (2272)
T ss_pred C
Confidence 3
No 50
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.6e-65 Score=649.84 Aligned_cols=524 Identities=18% Similarity=0.210 Sum_probs=406.8
Q ss_pred HHHHHHHHHHHHhhhhchhhhhcccCccCCC-C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000351 921 LLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G-PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSIL 998 (1623)
Q Consensus 921 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~-~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll 998 (1623)
.+++.++..++....++.+..-.|....... . ...+..+++++.++..++.+++.++....+.+....++.+++++++
T Consensus 11 ~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 90 (544)
T TIGR01842 11 VGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASF 90 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444555555555555554443221111 1 1224445555566677778888888899999999999999999999
Q ss_pred cCCccccccCCchhHHHHHhcccchhhhhhHH-HHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 999 RAPMVFFHTNPLGRIINRFAKDLGDIDRNVAV-FVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 1077 (1623)
Q Consensus 999 ~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~ 1077 (1623)
+.|+.. .|...+++++|++.+...+.. .+..++..++.++ .+++++..+|++.++++..+++++.+..+..+.
T Consensus 91 ~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~ 164 (544)
T TIGR01842 91 SATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRA 164 (544)
T ss_pred cCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999842 366789999999999887665 3444444444433 335566777776655443333333344444444
Q ss_pred HHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q 000351 1078 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL---MIWL 1154 (1623)
Q Consensus 1078 ~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~---~~~~ 1154 (1623)
.++..+...+..+...+++.|+++|+++||+|+.++.+.+++.+..++..+..+..............++..+ +++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (544)
T TIGR01842 165 TKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLG 244 (544)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444556677788899999999999999999999999888887776665554444333333333232222 2222
Q ss_pred HHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCC
Q 000351 1155 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 1234 (1623)
Q Consensus 1155 ~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp 1234 (1623)
++.+ ....+..+ .+.+..++.+...+..++..+...+..+.....+.+|+.++.+.+++.+. ....+ +
T Consensus 245 ~g~~-l~~~g~it-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~---~ 312 (544)
T TIGR01842 245 LGAY-LAIDGEIT-----PGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMPLP---E 312 (544)
T ss_pred HHHH-HHHcCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCCCC---C
Confidence 2222 23355555 66666667777788889999999999999999999999999986654321 11111 2
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
..+.|+++||+|+|+++.+++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+
T Consensus 313 ~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~ 392 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGK 392 (544)
T ss_pred CCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhh
Confidence 34679999999999755457999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+++||||||.+|++|+|+|+..++ +.+|++++++++.++++++++++|.|+||.++++|.+||||||||++||||++++
T Consensus 393 ~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~ 472 (544)
T TIGR01842 393 HIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGD 472 (544)
T ss_pred heEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998655 4789999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhh
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|+|||||||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 473 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999875 6799999999999998999999999999999999999975
No 51
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4.4e-67 Score=667.24 Aligned_cols=450 Identities=24% Similarity=0.395 Sum_probs=341.8
Q ss_pred CcEEEEeeEEEcCCC-CCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC-----CCCCeEEE---------
Q 000351 613 PAISIRNGYFSWDSK-AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAVI--------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~-~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~-----~~g~~~~~--------- 677 (1623)
+.++++|++++|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|.++| ++|. +.+
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~-i~~~g~~i~~~~ 82 (529)
T PRK15134 4 PLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGD-IRFHGESLLHAS 82 (529)
T ss_pred ceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceE-EEECCEecccCC
Confidence 368999999999631 135799999999999999999999999999999999999986 5773 221
Q ss_pred --------cCcEEEEccCcc--cC-cccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCC
Q 000351 678 --------RGTVAYVPQVSW--IF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERG 738 (1623)
Q Consensus 678 --------~~~iay~~Q~~~--l~-~~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g 738 (1623)
+..|||++|+|. ++ ..|+++|+.++. ..+. ++..++++.+++.+... ......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~--------~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK--------RLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhhCC
Confidence 135999999985 33 469999986421 1221 33455566666643110 112334
Q ss_pred CccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCE
Q 000351 739 VNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGM 816 (1623)
Q Consensus 739 ~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~ 816 (1623)
.+|||||||||+|||||+.+|+++|||||||+||+.+.+++.+.+.+... .|+|+|+|||+++++. .||+|++|++|+
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~ 234 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGR 234 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCE
Confidence 68999999999999999999999999999999999999999986555333 3899999999999876 589999999999
Q ss_pred EEEecChhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhh
Q 000351 817 VKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERE 896 (1623)
Q Consensus 817 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 896 (1623)
+++.|+++++..... .
T Consensus 235 i~~~g~~~~~~~~~~--------------------------------------~-------------------------- 250 (529)
T PRK15134 235 CVEQNRAATLFSAPT--------------------------------------H-------------------------- 250 (529)
T ss_pred EEEeCCHHHHhhCCC--------------------------------------C--------------------------
Confidence 998887665431000 0
Q ss_pred cccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 000351 897 TGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSY 976 (1623)
Q Consensus 897 ~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~ 976 (1623)
.+.+.
T Consensus 251 ----------~~~~~----------------------------------------------------------------- 255 (529)
T PRK15134 251 ----------PYTQK----------------------------------------------------------------- 255 (529)
T ss_pred ----------HHHHH-----------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHH
Q 000351 977 WLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMS 1056 (1623)
Q Consensus 977 ~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1623)
T Consensus 256 -------------------------------------------------------------------------------- 255 (529)
T PRK15134 256 -------------------------------------------------------------------------------- 255 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1057 LWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGA 1136 (1623)
Q Consensus 1057 ~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~ 1136 (1623)
++ ..
T Consensus 256 ----------------~~----------~~-------------------------------------------------- 259 (529)
T PRK15134 256 ----------------LL----------NS-------------------------------------------------- 259 (529)
T ss_pred ----------------HH----------Hh--------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000351 1137 NRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL 1216 (1623)
Q Consensus 1137 ~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~ 1216 (1623)
. . +. .
T Consensus 260 ------------------------------~-----~-----------------------------------~~----~- 264 (529)
T PRK15134 260 ------------------------------E-----P-----------------------------------SG----D- 264 (529)
T ss_pred ------------------------------C-----c-----------------------------------cc----c-
Confidence 0 0 00 0
Q ss_pred CCCCCccccCCCCCCCCCCCccEEEEEEEEEeCC---------CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhh
Q 000351 1217 PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLF 1287 (1623)
Q Consensus 1217 ~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~ 1287 (1623)
+ ..+ ++. ....|+++|++++|+. +..++|+|+||+|++||++||+||||||||||+++|.
T Consensus 265 ~-~~~-------~~~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~ 333 (529)
T PRK15134 265 P-VPL-------PEP---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALL 333 (529)
T ss_pred c-ccc-------CCC---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 0 000 000 0114899999999952 1246999999999999999999999999999999999
Q ss_pred ccccCCCcEEEECCEecCCCChHH---hhhceEEEcCCC--cccc-ccHHhhcCCC----C-CCC----HHHHHHHHHHh
Q 000351 1288 RIVELERGRILIDGFDIAKFGLMD---LRKILGIIPQSP--VLFS-GTVRFNLDPF----S-EHS----DADLWEALERA 1352 (1623)
Q Consensus 1288 rl~~p~~G~I~IdG~di~~i~~~~---lR~~i~~vpQdp--~Lf~-gTIr~NLd~~----~-~~s----d~~i~~aL~~~ 1352 (1623)
|++ |++|+|.++|.++...+... +|++++||||+| .+|. .|+++|+... . ..+ ++++.++++..
T Consensus 334 Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 412 (529)
T PRK15134 334 RLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEV 412 (529)
T ss_pred CcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHc
Confidence 998 58999999999998776543 477899999998 3665 4999999631 1 011 12233444443
Q ss_pred cHHHHHHhccCCcc-hhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEE
Q 000351 1353 HLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLI 1429 (1623)
Q Consensus 1353 ~l~~~i~~lp~gLd-t~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~ 1429 (1623)
|++ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+
T Consensus 413 -----------~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~ 481 (529)
T PRK15134 413 -----------GLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLF 481 (529)
T ss_pred -----------CCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEE
Confidence 443 23344556899999999999999999999999999999999999999999999864 2789999
Q ss_pred eecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1430 IAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1430 IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
|||+++.+.. ||||++|++|++++.|++++++..+
T Consensus 482 vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 482 ISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred EeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 9999999976 9999999999999999999998654
No 52
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-63 Score=645.30 Aligned_cols=540 Identities=19% Similarity=0.233 Sum_probs=429.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 294 ALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPA-WIG-YIYAFSIFVGVVLGVLCEAQYFQNVMRVGFR 371 (1623)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 371 (1623)
...+.+++.++..+++.++..++..+.|+++..+++.+...... ... ..+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677788888888999999999999999999977542221 111 1122223333444455555555667788888
Q ss_pred HHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000351 372 LRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQA-LHTLWSAPFRIIISLVLLYNELGVASLLGALLL 450 (1623)
Q Consensus 372 ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~-~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~ 450 (1623)
+...++..+|+|.++.+.....+.+.|++++++++|++.+.+.+.. +..+....+.+++++++++...++.+++.++++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~ 175 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIF 175 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988999999999999999999986643 344445544444454445444444555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000351 451 VFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACN-SFI 529 (1623)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~-~~~ 529 (1623)
++.+.+..+..++..+..++..+..++..+.+.|.++|+++||.|+.|+.+.+++.+..++..+...+........ ..+
T Consensus 176 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (592)
T PRK10790 176 PAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPL 255 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555666667777777778888888999999999999999999999999999887776555433333322221 111
Q ss_pred HHH---HHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC
Q 000351 530 LNS---IPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP 606 (1623)
Q Consensus 530 ~~~---~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 606 (1623)
... ...++.++.++ + ...+.++.+.+++++.++..+..|+..++..+..+.++..+++||.++++.++.......
T Consensus 256 ~~~~~~~~~~~~~~~~~-~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~ 333 (592)
T PRK10790 256 LSLFSALILCGLLMLFG-F-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGNDD 333 (592)
T ss_pred HHHHHHHHHHHHHHHHH-H-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCc
Confidence 111 11111112222 3 357889999999999999999999999999999999999999999999976543211111
Q ss_pred CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------
Q 000351 607 PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------- 678 (1623)
Q Consensus 607 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------- 678 (1623)
.......|+++|++|+|++ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+.
T Consensus 334 -~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G-~I~idg~~i~~~~ 409 (592)
T PRK10790 334 -RPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEG-EIRLDGRPLSSLS 409 (592)
T ss_pred -cCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCc-eEEECCEEhhhCC
Confidence 1112346999999999974 36799999999999999999999999999999999999999998 44433
Q ss_pred -----CcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 679 -----GTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 679 -----~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
+.|+||||+|++|++||+|||.++++.+++++.++++.+++.++++.+|+|.+|.+|++|.+||||||||++|||
T Consensus 410 ~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialAR 489 (592)
T PRK10790 410 HSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALAR 489 (592)
T ss_pred HHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHH
Confidence 469999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhH
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELF 833 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 833 (1623)
|++++|+|+|||||||+||+++++.|.+.+. ...+++|+|+|||+++.++.||+|++|++|++++.|+|+|+++.++.|
T Consensus 490 aLl~~~~illlDEpts~LD~~t~~~i~~~l~-~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~~y 568 (592)
T PRK10790 490 VLVQTPQILILDEATANIDSGTEQAIQQALA-AVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQGRY 568 (592)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHH-HHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCHH
Confidence 9999999999999999999999999987664 445689999999999999999999999999999999999999999999
Q ss_pred HHhHHhh
Q 000351 834 QKLMENA 840 (1623)
Q Consensus 834 ~~~~~~~ 840 (1623)
+++.+.+
T Consensus 569 ~~l~~~~ 575 (592)
T PRK10790 569 WQMYQLQ 575 (592)
T ss_pred HHHHHHH
Confidence 9887654
No 53
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=7e-67 Score=664.54 Aligned_cols=439 Identities=26% Similarity=0.427 Sum_probs=336.0
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCc--cCCCCCeEEE---------------
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL--PPVSDASAVI--------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~--~~~~g~~~~~--------------- 677 (1623)
|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+. +|++|....-
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 47899999995 357999999999999999999999999999999999997 6888843211
Q ss_pred ------------------------------cCcEEEEccC-cccC-cccHHHHHhcCC---CCCH----HHHHHHHHHhC
Q 000351 678 ------------------------------RGTVAYVPQV-SWIF-NATVRDNILFGS---AFEP----ARYEKAIDVTS 718 (1623)
Q Consensus 678 ------------------------------~~~iay~~Q~-~~l~-~~Tv~enI~~g~---~~~~----~~~~~~~~~~~ 718 (1623)
+..++|++|+ +.++ ..|++||+.++. .++. ++..++++.++
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 1248999997 5665 469999998742 1221 34455666777
Q ss_pred chhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEc
Q 000351 719 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVT 797 (1623)
Q Consensus 719 l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvt 797 (1623)
+.+..+. ...+|||||||||+|||||+.+|+++||||||++||+.+.+++.+.+..... .|+|||+||
T Consensus 158 l~~~~~~-----------~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivt 226 (520)
T TIGR03269 158 LSHRITH-----------IARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTS 226 (520)
T ss_pred Chhhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence 6544433 3358999999999999999999999999999999999999999886655433 489999999
Q ss_pred CCcchhh-hcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCccc
Q 000351 798 NQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEA 876 (1623)
Q Consensus 798 H~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (1623)
|+++++. .||+|++|++|+++..|+++++...
T Consensus 227 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----------------------------------------------- 259 (520)
T TIGR03269 227 HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV----------------------------------------------- 259 (520)
T ss_pred CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-----------------------------------------------
Confidence 9999986 5899999999998876654332100
Q ss_pred ccccccccchhhhhhHhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHH
Q 000351 877 SDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFY 956 (1623)
Q Consensus 877 ~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~ 956 (1623)
|..
T Consensus 260 -------------------------------~~~---------------------------------------------- 262 (520)
T TIGR03269 260 -------------------------------FME---------------------------------------------- 262 (520)
T ss_pred -------------------------------HHh----------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHH
Q 000351 957 NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFM 1036 (1623)
Q Consensus 957 ~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~ 1036 (1623)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHH
Q 000351 1037 GQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMA 1116 (1623)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~ 1116 (1623)
..
T Consensus 263 -------------------------------------------~~----------------------------------- 264 (520)
T TIGR03269 263 -------------------------------------------GV----------------------------------- 264 (520)
T ss_pred -------------------------------------------hc-----------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1117 DINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRL 1196 (1623)
Q Consensus 1117 ~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~ 1196 (1623)
.
T Consensus 265 --------------------------------------------------------~----------------------- 265 (520)
T TIGR03269 265 --------------------------------------------------------S----------------------- 265 (520)
T ss_pred --------------------------------------------------------h-----------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCC---CCCCcccceeeEeCCCCEEEEec
Q 000351 1197 ASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---ELPPVLHGLSFTIPPSDKVGIVG 1273 (1623)
Q Consensus 1197 ~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~---~~~~vL~~isl~I~~GekvgIvG 1273 (1623)
++.. +... +. ....|+++|++++|+. +..++|+|+||+|++||++||+|
T Consensus 266 ------------~~~~----~~~~--------~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G 317 (520)
T TIGR03269 266 ------------EVEK----ECEV--------EV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVG 317 (520)
T ss_pred ------------hhcc----cccc--------CC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEEC
Confidence 0000 0000 00 0124999999999952 22369999999999999999999
Q ss_pred CCCCChhhHHHHhhccccCCCcEEEEC-CE---ecCCCC---hHHhhhceEEEcCCCccccc-cHHhhcCCC-C-CCC--
Q 000351 1274 RTGAGKSSMLNTLFRIVELERGRILID-GF---DIAKFG---LMDLRKILGIIPQSPVLFSG-TVRFNLDPF-S-EHS-- 1341 (1623)
Q Consensus 1274 rsGSGKSTLl~lL~rl~~p~~G~I~Id-G~---di~~i~---~~~lR~~i~~vpQdp~Lf~g-TIr~NLd~~-~-~~s-- 1341 (1623)
|||||||||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||++.+|.. |+++|+... . ...
T Consensus 318 ~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~ 397 (520)
T TIGR03269 318 TSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDE 397 (520)
T ss_pred CCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999996 64 344332 23467789999999988875 999999631 1 111
Q ss_pred --HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHH
Q 000351 1342 --DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIR 1419 (1623)
Q Consensus 1342 --d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~ 1419 (1623)
++++.++++..++.+. ..+.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+
T Consensus 398 ~~~~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~ 471 (520)
T TIGR03269 398 LARMKAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSIL 471 (520)
T ss_pred HHHHHHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 1223344444433210 00012344456799999999999999999999999999999999999999999998
Q ss_pred HHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1420 EEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1420 ~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+.. .+.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 472 ~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 472 KAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 864 27899999999999977 99999999999999999998764
No 54
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-66 Score=659.93 Aligned_cols=444 Identities=21% Similarity=0.327 Sum_probs=337.1
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC--CCCCeEEE-------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP--VSDASAVI------------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~--~~g~~~~~------------- 677 (1623)
+.++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|.++| ++| .+.+
T Consensus 4 ~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G-~i~~~g~~~~~~~~~~~ 79 (506)
T PRK13549 4 YLLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEG-EIIFEGEELQASNIRDT 79 (506)
T ss_pred ceEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCe-EEEECCEECCCCCHHHH
Confidence 3699999999996 35799999999999999999999999999999999999986 678 4332
Q ss_pred -cCcEEEEccCcccC-cccHHHHHhcCCC------CCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 -RGTVAYVPQVSWIF-NATVRDNILFGSA------FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 -~~~iay~~Q~~~l~-~~Tv~enI~~g~~------~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..++|++|++.++ +.|++||+.++.. .+.+ +..++++..++.+. ......+|||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq 148 (506)
T PRK13549 80 ERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDIN-----------PATPVGNLGLGQ 148 (506)
T ss_pred HHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCC-----------cccchhhCCHHH
Confidence 23599999999886 5699999988632 1221 22333444433221 233446899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
||||+|||||+.+|+++|||||||+||+.....+++.+.....+|+|+|++||+++++. .||+|++|++|+++..|+.+
T Consensus 149 kqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 228 (506)
T PRK13549 149 QQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAA 228 (506)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccc
Confidence 99999999999999999999999999999999999866554446899999999999986 48999999999998776533
Q ss_pred HHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHH
Q 000351 825 DLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKV 904 (1623)
Q Consensus 825 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 904 (1623)
++... + .
T Consensus 229 ~~~~~---------------------------------------------------------------~----------~ 235 (506)
T PRK13549 229 GMTED---------------------------------------------------------------D----------I 235 (506)
T ss_pred cCCHH---------------------------------------------------------------H----------H
Confidence 21000 0 0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 905 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLY 984 (1623)
Q Consensus 905 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~ 984 (1623)
...+.
T Consensus 236 ~~~~~--------------------------------------------------------------------------- 240 (506)
T PRK13549 236 ITMMV--------------------------------------------------------------------------- 240 (506)
T ss_pred HHHhh---------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHH
Q 000351 985 AAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLL 1064 (1623)
Q Consensus 985 ~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1064 (1623)
|
T Consensus 241 --------------------------~----------------------------------------------------- 241 (506)
T PRK13549 241 --------------------------G----------------------------------------------------- 241 (506)
T ss_pred --------------------------C-----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1065 LLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL 1144 (1623)
Q Consensus 1065 ~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1144 (1623)
+
T Consensus 242 ------------------------~------------------------------------------------------- 242 (506)
T PRK13549 242 ------------------------R------------------------------------------------------- 242 (506)
T ss_pred ------------------------c-------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 000351 1145 EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVI 1224 (1623)
Q Consensus 1145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~ 1224 (1623)
... + ..|...
T Consensus 243 --------------------~~~-----------------------------------------~-----~~~~~~---- 252 (506)
T PRK13549 243 --------------------ELT-----------------------------------------A-----LYPREP---- 252 (506)
T ss_pred --------------------Ccc-----------------------------------------c-----cccccc----
Confidence 000 0 000000
Q ss_pred cCCCCCCCCCCCccEEEEEEEEEeCC-CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-CCCcEEEECCE
Q 000351 1225 ESNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-LERGRILIDGF 1302 (1623)
Q Consensus 1225 ~~~~~~~~wp~~g~I~~~nVs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-p~~G~I~IdG~ 1302 (1623)
++ +....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.
T Consensus 253 ----~~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~ 325 (506)
T PRK13549 253 ----HT---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGK 325 (506)
T ss_pred ----cC---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCE
Confidence 00 01124899999999942 12369999999999999999999999999999999999999 59999999999
Q ss_pred ecCCCCh-HHhhhceEEEcCCC---cccc-ccHHhhcCCCC--CC------CHHHHHHHHHHhcHHHHHHhccCCcch-h
Q 000351 1303 DIAKFGL-MDLRKILGIIPQSP---VLFS-GTVRFNLDPFS--EH------SDADLWEALERAHLKDAIRRNSLGLDA-Q 1368 (1623)
Q Consensus 1303 di~~i~~-~~lR~~i~~vpQdp---~Lf~-gTIr~NLd~~~--~~------sd~~i~~aL~~~~l~~~i~~lp~gLdt-~ 1368 (1623)
++...+. +..|++++|+||+| .+|. .|+.+|+.... .. +.++ .+..+.+.++.+ |++. .
T Consensus 326 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~ 398 (506)
T PRK13549 326 PVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA-----ELKTILESIQRL--KVKTAS 398 (506)
T ss_pred ECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH-----HHHHHHHHHHhc--CccCCC
Confidence 9875543 34577899999997 3564 59999996311 11 1111 111233444443 3431 2
Q ss_pred hhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEE
Q 000351 1369 VSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 1446 (1623)
Q Consensus 1369 v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl 1446 (1623)
.......||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. |||+++|
T Consensus 399 ~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l 478 (506)
T PRK13549 399 PELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVM 478 (506)
T ss_pred cccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEE
Confidence 344456799999999999999999999999999999999999999999998764 47899999999999977 9999999
Q ss_pred eCceEeeecChhHHh
Q 000351 1447 DSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1447 ~~G~ive~Gtp~eLl 1461 (1623)
++|+++..|+++++.
T Consensus 479 ~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 479 HEGKLKGDLINHNLT 493 (506)
T ss_pred ECCEEEEEeccccCC
Confidence 999999999988763
No 55
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-66 Score=661.39 Aligned_cols=442 Identities=23% Similarity=0.355 Sum_probs=335.1
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------- 678 (1623)
+.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+.
T Consensus 4 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G-~i~~~g~~i~~~~~~~~~~ 79 (510)
T PRK09700 4 PYISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKG-TITINNINYNKLDHKLAAQ 79 (510)
T ss_pred ceEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCcc-EEEECCEECCCCCHHHHHH
Confidence 35899999999963 5799999999999999999999999999999999999999998 43332
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC-------C---CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccCh
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA-------F---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 743 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~-------~---~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 743 (1623)
..|+|++|++.++ +.||+||+.++.. . +. ++..+.++.+++.+. ......+|||
T Consensus 80 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSg 148 (510)
T PRK09700 80 LGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-----------LDEKVANLSI 148 (510)
T ss_pred CCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-----------cccchhhCCH
Confidence 3599999999876 5699999987531 0 11 123334444444322 2234468999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecC
Q 000351 744 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 744 GQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~ 822 (1623)
||||||+|||||+.+|+++||||||++||+.+.+++.+.+.....+|+|+|+|||+++++. .||+|++|++|+++..|+
T Consensus 149 G~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~ 228 (510)
T PRK09700 149 SHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGM 228 (510)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecc
Confidence 9999999999999999999999999999999999999866554445899999999999986 589999999999988776
Q ss_pred hhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchH
Q 000351 823 FEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSF 902 (1623)
Q Consensus 823 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 902 (1623)
++++... ....
T Consensus 229 ~~~~~~~-----~~~~---------------------------------------------------------------- 239 (510)
T PRK09700 229 VSDVSND-----DIVR---------------------------------------------------------------- 239 (510)
T ss_pred hhhCCHH-----HHHH----------------------------------------------------------------
Confidence 5443100 0000
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 903 KVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISS 982 (1623)
Q Consensus 903 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~ 982 (1623)
.+.
T Consensus 240 ----~~~------------------------------------------------------------------------- 242 (510)
T PRK09700 240 ----LMV------------------------------------------------------------------------- 242 (510)
T ss_pred ----Hhc-------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHH
Q 000351 983 LYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMP 1062 (1623)
Q Consensus 983 ~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1062 (1623)
|+ + +
T Consensus 243 ----------------------------~~-------~---~-------------------------------------- 246 (510)
T PRK09700 243 ----------------------------GR-------E---L-------------------------------------- 246 (510)
T ss_pred ----------------------------CC-------C---c--------------------------------------
Confidence 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1063 LLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAI 1142 (1623)
Q Consensus 1063 l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1142 (1623)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 000351 1143 RLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPL 1222 (1623)
Q Consensus 1143 ~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~ 1222 (1623)
. .+ +.......
T Consensus 247 ------------------------~----------------------------------------~~---~~~~~~~~-- 257 (510)
T PRK09700 247 ------------------------Q----------------------------------------NR---FNAMKENV-- 257 (510)
T ss_pred ------------------------c----------------------------------------cc---cccccccc--
Confidence 0 00 00000000
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCE
Q 000351 1223 VIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF 1302 (1623)
Q Consensus 1223 ~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~ 1302 (1623)
.++ +....|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.
T Consensus 258 -----~~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~ 325 (510)
T PRK09700 258 -----SNL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGK 325 (510)
T ss_pred -----ccC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCE
Confidence 000 0112499999999763 3899999999999999999999999999999999999999999999999
Q ss_pred ecCCCCh-HHhhhceEEEcCCC---ccccc-cHHhhcCCCCC------------CCHHHHHHHHHHhcHHHHHHhccCCc
Q 000351 1303 DIAKFGL-MDLRKILGIIPQSP---VLFSG-TVRFNLDPFSE------------HSDADLWEALERAHLKDAIRRNSLGL 1365 (1623)
Q Consensus 1303 di~~i~~-~~lR~~i~~vpQdp---~Lf~g-TIr~NLd~~~~------------~sd~~i~~aL~~~~l~~~i~~lp~gL 1365 (1623)
++...+. ..+|++++|+||++ .+|.. |+++|+..... ....+ .+..+.+.++.+ |+
T Consensus 326 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l 398 (510)
T PRK09700 326 DISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVD-----EQRTAENQRELL--AL 398 (510)
T ss_pred ECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHH-----HHHHHHHHHHhc--CC
Confidence 9876544 45677899999984 57765 99999864211 01111 011123334432 34
Q ss_pred c-hhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCE
Q 000351 1366 D-AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDR 1442 (1623)
Q Consensus 1366 d-t~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~Dr 1442 (1623)
. .........||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. |||
T Consensus 399 ~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~ 478 (510)
T PRK09700 399 KCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDR 478 (510)
T ss_pred CCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCE
Confidence 3 22344456799999999999999999999999999999999999999999998764 47899999999999876 999
Q ss_pred EEEEeCceEeeecChhH
Q 000351 1443 ILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1443 I~Vl~~G~ive~Gtp~e 1459 (1623)
|++|++|++++.+++.+
T Consensus 479 i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 479 IAVFCEGRLTQILTNRD 495 (510)
T ss_pred EEEEECCEEEEEecCcc
Confidence 99999999999887633
No 56
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.8e-63 Score=641.22 Aligned_cols=545 Identities=23% Similarity=0.314 Sum_probs=438.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 292 LRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFR 371 (1623)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 371 (1623)
++.+++.+++.++..+++.++..++.++.|++++.+++.+-..........+++.++++.++..+......+...+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGER 88 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667778888888899999999999999999999843222211111222223333333444445556667788999
Q ss_pred HHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000351 372 LRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLL 450 (1623)
Q Consensus 372 ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~ 450 (1623)
+...++..+|+|.++.+.....+.+.|++++++++|++.+.+++. .+..++...+.+++++++++...++.+++.++.+
T Consensus 89 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 168 (576)
T TIGR02204 89 VVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAV 168 (576)
T ss_pred HHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999888888999999999999999988753 3445555555555555555555555555544455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 451 VFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFIL 530 (1623)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~ 530 (1623)
++.+.+..++.+++++..++.++..++..+.+.|.++|+++||.+++|+.+.+++++..++..+...+......+...+.
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (576)
T TIGR02204 169 PLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIV 248 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566788888899999999999999999999999999999999999998888877776665555444433333332
Q ss_pred HHHH--HHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC-CC-
Q 000351 531 NSIP--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLP-NP- 606 (1623)
Q Consensus 531 ~~~~--~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~-~~- 606 (1623)
.... ..+.++.+|.+.+..+.+|++.++++..++..+..|+..++..+..+.++..+++||.++++.++..... .+
T Consensus 249 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~ 328 (576)
T TIGR02204 249 IVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPK 328 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCc
Confidence 2221 2234445677777788999999999999999999999999999999999999999999999865432111 11
Q ss_pred -CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------
Q 000351 607 -PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------- 678 (1623)
Q Consensus 607 -~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------- 678 (1623)
...+....|+++|++|+|+++.++++|+|+||+++|||+++|+|+||||||||+++|+|+++|.+| .+.++
T Consensus 329 ~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G-~I~i~g~~i~~~ 407 (576)
T TIGR02204 329 TLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSG-RILLDGVDLRQL 407 (576)
T ss_pred cCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCC-EEEECCEEHHhc
Confidence 011122469999999999854346899999999999999999999999999999999999999999 55443
Q ss_pred ------CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 679 ------GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 679 ------~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
+.|+||||+|++|++||+|||.++.+ .++++.+++++.+++.++++.+|+|++|.+|++|.+||||||||++|
T Consensus 408 ~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~l 487 (576)
T TIGR02204 408 DPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAI 487 (576)
T ss_pred CHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHH
Confidence 36999999999999999999999865 57889999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcCh
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGE 831 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 831 (1623)
|||++++|+++|||||||+||+++++.+++.+.. ..+++|+|+|||+.+.++.+|+|++|++|++++.|+++++.+..+
T Consensus 488 aRal~~~~~ililDEpts~lD~~~~~~i~~~l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 488 ARAILKDAPILLLDEATSALDAESEQLVQQALET-LMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGG 566 (576)
T ss_pred HHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHcCC
Confidence 9999999999999999999999999999876654 457899999999999999999999999999999999999998888
Q ss_pred hHHHhHH
Q 000351 832 LFQKLME 838 (1623)
Q Consensus 832 ~~~~~~~ 838 (1623)
.|+++..
T Consensus 567 ~~~~l~~ 573 (576)
T TIGR02204 567 LYARLAR 573 (576)
T ss_pred hHHHHHh
Confidence 8877654
No 57
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.6e-63 Score=636.24 Aligned_cols=539 Identities=19% Similarity=0.252 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCC--chHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 295 LNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQ-QDGP--AWIGYI-YAFSIFVGVVLGVLCEAQYFQNVMRVGF 370 (1623)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~-~~~~--~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 370 (1623)
+.+.+++.++.++++.++..++..+.|.+++.+++... .+.. ....+. .+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888899999999999999999999998653 2211 001111 1223333444556666666667778999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000351 371 RLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALL 449 (1623)
Q Consensus 371 ~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~ 449 (1623)
++...++..+|+|.++++....++.++|++++++++|++.+.+++. .+..+....+.+++++++++...+..+++.+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999764 345555556666666665555544455544444
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 450 LVFMFP-VQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSF 528 (1623)
Q Consensus 450 ~~~~~~-~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~ 528 (1623)
+++..+ +..++.++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++++..++..+...+..........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (574)
T PRK11160 170 LLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQA 249 (574)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433333 3456677778888888999999999999999999999999999999999988887776666666555554444
Q ss_pred HHHHHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC-
Q 000351 529 ILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVL-RFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLP- 604 (1623)
Q Consensus 529 ~~~~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l-~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~- 604 (1623)
+......+ +.++.++.+. ..+.++++..++++.+...+ ..|+..++..+..+.++.++++||.++++.++....+
T Consensus 250 ~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~ 328 (574)
T PRK11160 250 LMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPT 328 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 43333222 2234445555 46788999888877665443 4588889999999999999999999999876532211
Q ss_pred CCCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc------
Q 000351 605 NPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------ 678 (1623)
Q Consensus 605 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------ 678 (1623)
.....+....|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++| .+.+.
T Consensus 329 ~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G-~I~i~g~~i~~ 406 (574)
T PRK11160 329 TSTAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQG-EILLNGQPIAD 406 (574)
T ss_pred ccCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-eEEECCEEhhh
Confidence 11111223469999999999743 35799999999999999999999999999999999999999999 44433
Q ss_pred -------CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 679 -------GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 679 -------~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
..|+||||+|++|++||+|||.++.+ .+++++.++++.++++++++. |+|++|.+||+|.+||||||||++
T Consensus 407 ~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRia 485 (574)
T PRK11160 407 YSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLG 485 (574)
T ss_pred CCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHH
Confidence 35999999999999999999999865 688899999999999999999 999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||||++++|+++|||||||+||+++++.|.+.+. ...+++|+|+|||+++.++.||+|++|++|+++++|+|+|+++++
T Consensus 486 lARall~~~~ililDE~ts~lD~~t~~~i~~~l~-~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 564 (574)
T PRK11160 486 IARALLHDAPLLLLDEPTEGLDAETERQILELLA-EHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQQ 564 (574)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH-HHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhcC
Confidence 9999999999999999999999999999988654 445789999999999999999999999999999999999999999
Q ss_pred hhHHHhHH
Q 000351 831 ELFQKLME 838 (1623)
Q Consensus 831 ~~~~~~~~ 838 (1623)
+.|+++++
T Consensus 565 g~y~~l~~ 572 (574)
T PRK11160 565 GRYYQLKQ 572 (574)
T ss_pred cHHHHHHh
Confidence 99888764
No 58
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.7e-63 Score=648.21 Aligned_cols=544 Identities=21% Similarity=0.290 Sum_probs=452.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 292 LRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFR 371 (1623)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 371 (1623)
++..++.+++.++..++..++..++.++.|++++.++|.+-........+.++++++++.++..++.....+...+++.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (694)
T TIGR01846 130 FIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSR 209 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777888888999999999999999999999875332222223334444455555666666666777888999
Q ss_pred HHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000351 372 LRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLL 450 (1623)
Q Consensus 372 ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~ 450 (1623)
+...++..+|+|.++++....++.++|++++++ +|++.+.+++. .+.......+.+++.+++++...++.+++.++++
T Consensus 210 ~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 288 (694)
T TIGR01846 210 IDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSL 288 (694)
T ss_pred HHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 69999998753 3444444444445555666666666777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 451 VFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFIL 530 (1623)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~ 530 (1623)
++.+.+..++.+++++..++..+..+++.+.+.|.++|+++||.+|.|+.+.+++.+..++..+...+..........+.
T Consensus 289 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (694)
T TIGR01846 289 VCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAI 368 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777888888888899999999999999999999999999999999999998888877777666666555554444
Q ss_pred HHHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-CC
Q 000351 531 NSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPN-PP 607 (1623)
Q Consensus 531 ~~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~-~~ 607 (1623)
..+..+ +.++.+|.+.+..+.+|++.++++..+...+..|+..+...+..+.++.++++|+.++++.++...... ..
T Consensus 369 ~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~ 448 (694)
T TIGR01846 369 ELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGLAA 448 (694)
T ss_pred HHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCCCC
Confidence 433322 334566777778889999999999999999999999999999999999999999999998765432111 11
Q ss_pred CCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------
Q 000351 608 LTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------- 677 (1623)
Q Consensus 608 ~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------- 677 (1623)
.......|+++|++|+|+++ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++| .+.+
T Consensus 449 ~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G-~I~idg~~i~~~~~ 526 (694)
T TIGR01846 449 LPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHG-QVLVDGVDLAIADP 526 (694)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-eEEECCEehhhCCH
Confidence 11223469999999999753 46799999999999999999999999999999999999999999 4443
Q ss_pred ---cCcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 678 ---RGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 678 ---~~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
+..|+||||+|++|++||+|||.++.+ .++++..++++.+++.+.++.+|+|.+|.+|++|.+||||||||++|||
T Consensus 527 ~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lAR 606 (694)
T TIGR01846 527 AWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIAR 606 (694)
T ss_pred HHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHH
Confidence 345999999999999999999999864 6788999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhH
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELF 833 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 833 (1623)
|++++|+|+|||||||+||+++++.+.+.+.. ..+++|+|+|||+++.++.||+|++|++|+++++|+++++++.++.|
T Consensus 607 all~~~~ililDEpts~LD~~~~~~i~~~l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~~y 685 (694)
T TIGR01846 607 ALVGNPRILIFDEATSALDYESEALIMRNMRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQGLY 685 (694)
T ss_pred HHHhCCCEEEEECCCcCCCHHHHHHHHHHHHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcCChH
Confidence 99999999999999999999999999987654 45789999999999999999999999999999999999999988999
Q ss_pred HHhHHh
Q 000351 834 QKLMEN 839 (1623)
Q Consensus 834 ~~~~~~ 839 (1623)
+++...
T Consensus 686 ~~l~~~ 691 (694)
T TIGR01846 686 ARLWQQ 691 (694)
T ss_pred HHHHHh
Confidence 888753
No 59
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-65 Score=653.21 Aligned_cols=201 Identities=17% Similarity=0.334 Sum_probs=171.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|. ++++
T Consensus 319 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i~ 385 (530)
T PRK15064 319 ALEVENLTKGFDNG--PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------ANIG 385 (530)
T ss_pred eEEEEeeEEeeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEEE
Confidence 59999999999643 6999999999999999999999999999999999999999999999872 5799
Q ss_pred EEcCCCc--ccc-ccHHhhcCCCC--CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1318 IIPQSPV--LFS-GTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1318 ~vpQdp~--Lf~-gTIr~NLd~~~--~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|+||++. ++. .|+++|+..+. ...++++.++++..++.. ........+||||||||++||||++.
T Consensus 386 ~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 386 YYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQ----------DDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCCh----------hHhcCcccccCHHHHHHHHHHHHHhc
Confidence 9999984 443 59999986432 223445666666665521 12233446799999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEe-eecChhHHhhc
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELLSN 1463 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~Gtp~eLl~~ 1463 (1623)
+|+||||||||++||+.+.+.+.+.|++. ++|||+|||+++.+.. ||||++|++|+++ ..|+++++++.
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999999999999999999999885 5699999999999987 9999999999998 77999988754
No 60
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=9.4e-63 Score=636.16 Aligned_cols=539 Identities=19% Similarity=0.259 Sum_probs=429.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 295 LNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRS 374 (1623)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~ 374 (1623)
.++.++..++..++..++..++.++.|++++.+++.+..... ... +++.+++..++..+......+...+...++|.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--IFP-LLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888899999999999999999998765321 111 11111122222223333334455677788888
Q ss_pred HHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000351 375 TLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFM 453 (1623)
Q Consensus 375 ~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~ 453 (1623)
.++..+|+|.++++.....+.+.|++++++++|++.+.+.+. .+..+....+.+++.+++++..-++.+++.++++++.
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~ 169 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVY 169 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999987543 3444444444444444444444444555555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 454 FPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSI 533 (1623)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~ 533 (1623)
..+..++.+++.+.+++..+..++..+...|.++|+++||.|+.++.+.+++.+.-++..+...+..........+....
T Consensus 170 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK13657 170 TLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAA 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777888888888889999999999999999999999999999999888887766665554443333333322222222
Q ss_pred H--HHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC-CC-CCC
Q 000351 534 P--VLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLP-NP-PLT 609 (1623)
Q Consensus 534 ~--~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~-~~-~~~ 609 (1623)
. ..+.++.++.+.+..|.+|++.+++++.++..+..|+..+...+..+.++..+++|+.++++.++..... .. ...
T Consensus 250 ~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 329 (588)
T PRK13657 250 STITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDLG 329 (588)
T ss_pred HHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCcC
Confidence 1 2334556677777889999999999999999999999999999999999999999999998764432111 10 111
Q ss_pred CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------
Q 000351 610 SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR----------- 678 (1623)
Q Consensus 610 ~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~----------- 678 (1623)
.....|+++|++|+|++ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++| .+.++
T Consensus 330 ~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G-~I~i~g~~i~~~~~~~ 406 (588)
T PRK13657 330 RVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG-RILIDGTDIRTVTRAS 406 (588)
T ss_pred CCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC-EEEECCEEhhhCCHHH
Confidence 12246999999999974 35799999999999999999999999999999999999999998 54433
Q ss_pred --CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 679 --GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 679 --~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
..|+|+||+|++|++||||||.++++ .++++.+++++.+++.+.++.+|+|.+|.+|++|.+||||||||++||||+
T Consensus 407 ~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARal 486 (588)
T PRK13657 407 LRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARAL 486 (588)
T ss_pred HHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999999864 678889999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHH
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQK 835 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 835 (1623)
+++|+|+|||||||+||+++++.|++.+.. ..+++|+|+||||.+.++.||+|++|++|+++++|+++++++..+.|.+
T Consensus 487 l~~~~iliLDEpts~LD~~t~~~i~~~l~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~~ 565 (588)
T PRK13657 487 LKDPPILILDEATSALDVETEAKVKAALDE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFAA 565 (588)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHHH
Confidence 999999999999999999999999887654 4468999999999999999999999999999999999999988888888
Q ss_pred hHHhh
Q 000351 836 LMENA 840 (1623)
Q Consensus 836 ~~~~~ 840 (1623)
+....
T Consensus 566 l~~~~ 570 (588)
T PRK13657 566 LLRAQ 570 (588)
T ss_pred HHHHh
Confidence 87644
No 61
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.9e-66 Score=651.04 Aligned_cols=435 Identities=21% Similarity=0.350 Sum_probs=333.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------C
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------G 679 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------~ 679 (1623)
.++++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+. .
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~-i~~~g~~~~~~~~~~~~~~ 79 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGS-ILYLGKEVTFNGPKSSQEA 79 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcE-EEECCEECCCCCHHHHHhC
Confidence 5899999999963 57999999999999999999999999999999999999999984 3322 3
Q ss_pred cEEEEccCcccC-cccHHHHHhcCCC-------CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 680 TVAYVPQVSWIF-NATVRDNILFGSA-------FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 680 ~iay~~Q~~~l~-~~Tv~enI~~g~~-------~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
.++|++|++.++ +.|++||+.++.. .+. ++..+.++..++.+.. .....+|||||||
T Consensus 80 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~q 148 (501)
T PRK10762 80 GIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-----------DKLVGELSIGEQQ 148 (501)
T ss_pred CEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-----------cCchhhCCHHHHH
Confidence 599999998776 5799999988632 122 1233344444443222 2334589999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHH
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 826 (1623)
|++|||||+.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++++. .||+|++|++|++++.|+.+++
T Consensus 149 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 149 MVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred HHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 999999999999999999999999999999998765554445899999999999986 5899999999999876643321
Q ss_pred hhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHH
Q 000351 827 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 906 (1623)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 906 (1623)
... +
T Consensus 229 ~~~---------------------------------------------------------------~------------- 232 (501)
T PRK10762 229 TED---------------------------------------------------------------S------------- 232 (501)
T ss_pred CHH---------------------------------------------------------------H-------------
Confidence 000 0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 907 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 986 (1623)
Q Consensus 907 ~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s 986 (1623)
..... +
T Consensus 233 -~~~~~-----------------------------~-------------------------------------------- 238 (501)
T PRK10762 233 -LIEMM-----------------------------V-------------------------------------------- 238 (501)
T ss_pred -HHHHh-----------------------------c--------------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q 000351 987 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 1066 (1623)
Q Consensus 987 ~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1066 (1623)
|
T Consensus 239 ------------------------~------------------------------------------------------- 239 (501)
T PRK10762 239 ------------------------G------------------------------------------------------- 239 (501)
T ss_pred ------------------------C-------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1067 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 1146 (1623)
Q Consensus 1067 ~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1146 (1623)
.
T Consensus 240 ----------------------~--------------------------------------------------------- 240 (501)
T PRK10762 240 ----------------------R--------------------------------------------------------- 240 (501)
T ss_pred ----------------------C---------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccC
Q 000351 1147 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 1226 (1623)
Q Consensus 1147 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~ 1226 (1623)
+... ..|.. +
T Consensus 241 --------------------------------------------------------------~~~~--~~~~~-~----- 250 (501)
T PRK10762 241 --------------------------------------------------------------KLED--QYPRL-D----- 250 (501)
T ss_pred --------------------------------------------------------------Cccc--ccccc-c-----
Confidence 0000 00000 0
Q ss_pred CCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC
Q 000351 1227 NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 1306 (1623)
Q Consensus 1227 ~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~ 1306 (1623)
.+ +..-.|+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++..
T Consensus 251 --~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~ 318 (501)
T PRK10762 251 --KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVT 318 (501)
T ss_pred --cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCC
Confidence 00 0111489999984 37999999999999999999999999999999999999999999999999987
Q ss_pred CChH-HhhhceEEEcCCC---cccc-ccHHhhcCCCC-----C----CCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhc
Q 000351 1307 FGLM-DLRKILGIIPQSP---VLFS-GTVRFNLDPFS-----E----HSDADLWEALERAHLKDAIRRNSLGLD-AQVSE 1371 (1623)
Q Consensus 1307 i~~~-~lR~~i~~vpQdp---~Lf~-gTIr~NLd~~~-----~----~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e 1371 (1623)
.+.. .+|++++|+||+| .+|. .|+++|+.... . .+.++. ...+.++++.+ |+. .....
T Consensus 319 ~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~ 391 (501)
T PRK10762 319 RSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLF--NIKTPSMEQ 391 (501)
T ss_pred CCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhc--CCCCCCccC
Confidence 6653 4677899999997 3554 59999996311 0 111110 11233344442 442 23445
Q ss_pred CCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCc
Q 000351 1372 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSG 1449 (1623)
Q Consensus 1372 ~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G 1449 (1623)
....||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|
T Consensus 392 ~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G 471 (501)
T PRK10762 392 AIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEG 471 (501)
T ss_pred chhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECC
Confidence 556799999999999999999999999999999999999999999999875 47899999999999877 9999999999
Q ss_pred eEeeecChhHH
Q 000351 1450 RVLEYDTPEEL 1460 (1623)
Q Consensus 1450 ~ive~Gtp~eL 1460 (1623)
++++.|+++++
T Consensus 472 ~i~~~~~~~~~ 482 (501)
T PRK10762 472 RISGEFTREQA 482 (501)
T ss_pred EEEEEeccccC
Confidence 99999998775
No 62
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.5e-65 Score=649.31 Aligned_cols=450 Identities=23% Similarity=0.394 Sum_probs=341.7
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------- 678 (1623)
+.++++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+.
T Consensus 10 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~~~ 85 (510)
T PRK15439 10 PLLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSG-TLEIGGNPCARLTPAKAHQ 85 (510)
T ss_pred ceEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCEECCCCCHHHHHh
Confidence 46999999999963 5799999999999999999999999999999999999999998 44332
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCCCC---HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSAFE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
..+||++|++.++ +.||+||+.++.... +++..+.++..++.+..+ ....+|||||||||+||||
T Consensus 86 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~a 154 (510)
T PRK15439 86 LGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDLD-----------SSAGSLEVADRQIVEILRG 154 (510)
T ss_pred CCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcccc-----------CChhhCCHHHHHHHHHHHH
Confidence 2499999999886 569999999874322 234455566666543222 3345899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcChhH
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNGELF 833 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 833 (1623)
|+.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++++. .||+|++|++|++++.|+++++....
T Consensus 155 L~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~--- 231 (510)
T PRK15439 155 LMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD--- 231 (510)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH---
Confidence 99999999999999999999999999866554445899999999999876 58999999999999888776543100
Q ss_pred HHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHHHHHHhhh
Q 000351 834 QKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALG 913 (1623)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 913 (1623)
... .+..
T Consensus 232 --~~~--------------------------------------------------------------------~~~~--- 238 (510)
T PRK15439 232 --IIQ--------------------------------------------------------------------AITP--- 238 (510)
T ss_pred --HHH--------------------------------------------------------------------HHhC---
Confidence 000 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 914 GLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 993 (1623)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~l 993 (1623)
.
T Consensus 239 ~------------------------------------------------------------------------------- 239 (510)
T PRK15439 239 A------------------------------------------------------------------------------- 239 (510)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 994 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 1073 (1623)
Q Consensus 994 l~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 1073 (1623)
+ ..
T Consensus 240 -------~--------~~-------------------------------------------------------------- 242 (510)
T PRK15439 240 -------A--------RE-------------------------------------------------------------- 242 (510)
T ss_pred -------c--------cc--------------------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1074 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW 1153 (1623)
Q Consensus 1074 y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 1153 (1623)
.+.+.
T Consensus 243 -----~~~~~---------------------------------------------------------------------- 247 (510)
T PRK15439 243 -----KSLSA---------------------------------------------------------------------- 247 (510)
T ss_pred -----ccccc----------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCC
Q 000351 1154 LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGW 1233 (1623)
Q Consensus 1154 ~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~w 1233 (1623)
..+. . ...|...+ ..+
T Consensus 248 -----------------------------------------------------~~~~-~-~~~~~~~~------~~~--- 263 (510)
T PRK15439 248 -----------------------------------------------------SQKL-W-LELPGNRR------QQA--- 263 (510)
T ss_pred -----------------------------------------------------cccc-c-cccccccc------ccC---
Confidence 0000 0 00000000 000
Q ss_pred CCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH-h
Q 000351 1234 PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-L 1312 (1623)
Q Consensus 1234 p~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~-l 1312 (1623)
+..-.|+++|++. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+... .
T Consensus 264 ~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 336 (510)
T PRK15439 264 AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRL 336 (510)
T ss_pred CCCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 0112489999983 2699999999999999999999999999999999999999999999999998776654 4
Q ss_pred hhceEEEcCCC---ccccc-cHHhhcCCC--C--C--CCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhHH
Q 000351 1313 RKILGIIPQSP---VLFSG-TVRFNLDPF--S--E--HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1313 R~~i~~vpQdp---~Lf~g-TIr~NLd~~--~--~--~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQr 1381 (1623)
|++|+|+||++ .+|.. |+.+|+..+ . . ....+. +..+.++++.+ |++ .........||||||
T Consensus 337 ~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~k 409 (510)
T PRK15439 337 ARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRAL--NIKFNHAEQAARTLSGGNQ 409 (510)
T ss_pred hCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHc--CCCCCCccCccccCCcHHH
Confidence 56899999996 36654 999998421 1 0 011111 11233444443 443 334555567999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|+++..|++++
T Consensus 410 qrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~ 489 (510)
T PRK15439 410 QKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAA 489 (510)
T ss_pred HHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcccc
Confidence 99999999999999999999999999999999999999864 47899999999999987 99999999999999999987
Q ss_pred Hhh
Q 000351 1460 LLS 1462 (1623)
Q Consensus 1460 Ll~ 1462 (1623)
+..
T Consensus 490 ~~~ 492 (510)
T PRK15439 490 INV 492 (510)
T ss_pred CCH
Confidence 653
No 63
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.8e-62 Score=630.99 Aligned_cols=535 Identities=25% Similarity=0.366 Sum_probs=433.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 299 LGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVA 378 (1623)
Q Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~ 378 (1623)
++ .++.+.++.++..++....|.++..+++.+.. .......+...++++.++..++...+.+.....+.++...++.
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 78888888999999999999999999998871 1111122222333333344555555555566667899999999
Q ss_pred HHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000351 379 AVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWS-APFRIIISLVLLYNELGVASLLGALLLVFMFPVQ 457 (1623)
Q Consensus 379 ~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~-~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~ 457 (1623)
.+|+|.++++....++...|++++++++|++.+...+........ .++.++..+++++..-...+++.+++.+++..+.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~ 169 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVL 169 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998765433333 4444444444444443345555555556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Q 000351 458 TFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIP--V 535 (1623)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~--~ 535 (1623)
.++.++..+..++..+..++..+.+.|.++|++.||.|+.++...++..+..++..+...+..........+..... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (567)
T COG1132 170 SLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLG 249 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777778888999999999999999999999999999999988777777666555554443333333322222221 2
Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcE
Q 000351 536 LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAI 615 (1623)
Q Consensus 536 ~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i 615 (1623)
.+.++.++.+.+..+.++++.+.+.+.++..+..|+..+...+..+..+..+++|+.++++.++...............|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~I 329 (567)
T COG1132 250 TVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDPLKDTIGSI 329 (567)
T ss_pred HHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCeE
Confidence 23344555666677789999999999999999999999999999999999999999999998654322221112233459
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCcEE
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTVA 682 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ia 682 (1623)
+++|++|+|++ ++++|+|+||++++||++|||||+|||||||+++|+|+++|++| .+.+ +.+||
T Consensus 330 ~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G-~I~idg~dI~~i~~~~lr~~I~ 406 (567)
T COG1132 330 EFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSG-EILIDGIDIRDISLDSLRKRIG 406 (567)
T ss_pred EEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCC-eEEECCEehhhcCHHHHHHhcc
Confidence 99999999985 46899999999999999999999999999999999999999999 4443 34699
Q ss_pred EEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000351 683 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 761 (1623)
Q Consensus 683 y~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~i 761 (1623)
||||+|++|++||+|||.+|++ .++++..++++.+++++.+..+|+|++|.+||+|.+||||||||++||||++++|+|
T Consensus 407 ~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~I 486 (567)
T COG1132 407 IVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPI 486 (567)
T ss_pred EEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999999987 688999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhh
Q 000351 762 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 840 (1623)
Q Consensus 762 llLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 840 (1623)
++||||||+||+++++.|.+.+. ...++||+|+|+||++.+..||+|++|++|+|+++|+|+||+++++.|++++..+
T Consensus 487 LILDEaTSalD~~tE~~I~~~l~-~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~~~ 564 (567)
T COG1132 487 LILDEATSALDTETEALIQDALK-KLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQAQ 564 (567)
T ss_pred EEEeccccccCHHhHHHHHHHHH-HHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999998765 4447899999999999999999999999999999999999999999999988654
No 64
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.2e-65 Score=648.27 Aligned_cols=441 Identities=20% Similarity=0.302 Sum_probs=330.1
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC--CCCCeEEEc--------------
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP--VSDASAVIR-------------- 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~--~~g~~~~~~-------------- 678 (1623)
++++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++| ++| .+.+.
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G-~i~~~g~~~~~~~~~~~~~ 77 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDG-EIYWSGSPLKASNIRDTER 77 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCe-EEEECCEECCCCCHHHHHh
Confidence 789999999963 5799999999999999999999999999999999999987 678 44332
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCCC-------CHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSAF-------EPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~~-------~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
..|+|++|++.++ +.|++||+.++... +.+ +..++++..++.+.. + .....+||||||
T Consensus 78 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~----~~~~~~LSgG~~ 147 (500)
T TIGR02633 78 AGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------V----TRPVGDYGGGQQ 147 (500)
T ss_pred CCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------c----cCchhhCCHHHH
Confidence 3599999999876 56999999876321 111 223334444432211 1 122457999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhH
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 825 (1623)
|||+|||||+.+|+++||||||++||+.+.+++.+.+.....+|+|+|+|||+++++.. ||+|++|++|+++..|+.++
T Consensus 148 qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (500)
T TIGR02633 148 QLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMST 227 (500)
T ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCccc
Confidence 99999999999999999999999999999999998665544468999999999999864 89999999999876543211
Q ss_pred HhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHH
Q 000351 826 LSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVL 905 (1623)
Q Consensus 826 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 905 (1623)
+.. +. ..
T Consensus 228 ~~~----------------------------------------------------------------~~---------~~ 234 (500)
T TIGR02633 228 MSE----------------------------------------------------------------DD---------II 234 (500)
T ss_pred CCH----------------------------------------------------------------HH---------HH
Confidence 000 00 00
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 906 SRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYA 985 (1623)
Q Consensus 906 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~ 985 (1623)
..+.
T Consensus 235 ~~~~---------------------------------------------------------------------------- 238 (500)
T TIGR02633 235 TMMV---------------------------------------------------------------------------- 238 (500)
T ss_pred HHHh----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHH
Q 000351 986 AKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLL 1065 (1623)
Q Consensus 986 s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1065 (1623)
|
T Consensus 239 -------------------------~------------------------------------------------------ 239 (500)
T TIGR02633 239 -------------------------G------------------------------------------------------ 239 (500)
T ss_pred -------------------------C------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1066 LFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLE 1145 (1623)
Q Consensus 1066 ~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1145 (1623)
+ +
T Consensus 240 -----------------------~-~------------------------------------------------------ 241 (500)
T TIGR02633 240 -----------------------R-E------------------------------------------------------ 241 (500)
T ss_pred -----------------------c-c------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc
Q 000351 1146 IVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIE 1225 (1623)
Q Consensus 1146 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~ 1225 (1623)
. . . ..+.+.
T Consensus 242 --------------------~------~-----------------------------------~-----~~~~~~----- 250 (500)
T TIGR02633 242 --------------------I------T-----------------------------------S-----LYPHEP----- 250 (500)
T ss_pred --------------------c------c-----------------------------------c-----cccccc-----
Confidence 0 0 0 000000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-CCcEEEECCEe
Q 000351 1226 SNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-ERGRILIDGFD 1303 (1623)
Q Consensus 1226 ~~~~~~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-~~G~I~IdG~d 1303 (1623)
.+ +..-.|+++|++++|+.+ ...+|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.++|.+
T Consensus 251 --~~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~ 324 (500)
T TIGR02633 251 --HE----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKP 324 (500)
T ss_pred --cC----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEE
Confidence 00 011148999999999421 23699999999999999999999999999999999999995 89999999999
Q ss_pred cCCCCh-HHhhhceEEEcCCC---cccc-ccHHhhcCCCC-----C---CCHHHHHHHHHHhcHHHHHHhccCCcch-hh
Q 000351 1304 IAKFGL-MDLRKILGIIPQSP---VLFS-GTVRFNLDPFS-----E---HSDADLWEALERAHLKDAIRRNSLGLDA-QV 1369 (1623)
Q Consensus 1304 i~~i~~-~~lR~~i~~vpQdp---~Lf~-gTIr~NLd~~~-----~---~sd~~i~~aL~~~~l~~~i~~lp~gLdt-~v 1369 (1623)
+...+. ..+|++++|+||++ .+|. .|+++|+.... . ....+ .+..+.++++.+ |+.. ..
T Consensus 325 ~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~ 397 (500)
T TIGR02633 325 VDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAA-----ELQIIGSAIQRL--KVKTASP 397 (500)
T ss_pred CCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHH-----HHHHHHHHHHhc--CccCCCc
Confidence 875443 46788899999996 4665 49999997421 0 01111 111223334433 3321 22
Q ss_pred hcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEe
Q 000351 1370 SEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLD 1447 (1623)
Q Consensus 1370 ~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~ 1447 (1623)
......||||||||++|||||+.+|+||||||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.. ||||++|+
T Consensus 398 ~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~ 477 (500)
T TIGR02633 398 FLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIG 477 (500)
T ss_pred cCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEE
Confidence 33445799999999999999999999999999999999999999999998864 47899999999999977 99999999
Q ss_pred CceEeeecChhH
Q 000351 1448 SGRVLEYDTPEE 1459 (1623)
Q Consensus 1448 ~G~ive~Gtp~e 1459 (1623)
+|+++..++.++
T Consensus 478 ~G~i~~~~~~~~ 489 (500)
T TIGR02633 478 EGKLKGDFVNHA 489 (500)
T ss_pred CCEEEEEEcccc
Confidence 999998776544
No 65
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-65 Score=648.32 Aligned_cols=439 Identities=21% Similarity=0.295 Sum_probs=331.6
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------c
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------R 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~ 678 (1623)
+.++++|+++.|++ +++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+ +
T Consensus 3 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~-I~~~g~~i~~~~~~~~~~ 78 (501)
T PRK11288 3 PYLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGS-ILIDGQEMRFASTTAALA 78 (501)
T ss_pred ceEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCE-EEECCEECCCCCHHHHHh
Confidence 36899999999963 56999999999999999999999999999999999999999984 332 2
Q ss_pred CcEEEEccCcccCc-ccHHHHHhcCCC------CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 679 GTVAYVPQVSWIFN-ATVRDNILFGSA------FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~-~Tv~enI~~g~~------~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
..|+|++|++.++. .||+||+.++.. .+. ++..+.++.+++... ......+|||||||
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~q 147 (501)
T PRK11288 79 AGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQRQ 147 (501)
T ss_pred CCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHHH
Confidence 35999999998874 699999987631 122 233444555544321 12344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHH
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 826 (1623)
|++||||++.+|+++||||||++||+.+.+++++.+.....+|+|+|+|||+++++. .||+|++|++|+++..++..+.
T Consensus 148 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 227 (501)
T PRK11288 148 MVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQ 227 (501)
T ss_pred HHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcccc
Confidence 999999999999999999999999999999999866554445899999999999886 4899999999998753321000
Q ss_pred hhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHH
Q 000351 827 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 906 (1623)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 906 (1623)
. ..+.
T Consensus 228 -----------------------------~----------------------------------~~~~------------ 232 (501)
T PRK11288 228 -----------------------------V----------------------------------DRDQ------------ 232 (501)
T ss_pred -----------------------------C----------------------------------CHHH------------
Confidence 0 0000
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 907 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 986 (1623)
Q Consensus 907 ~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s 986 (1623)
+...
T Consensus 233 -~~~~--------------------------------------------------------------------------- 236 (501)
T PRK11288 233 -LVQA--------------------------------------------------------------------------- 236 (501)
T ss_pred -HHHH---------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q 000351 987 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 1066 (1623)
Q Consensus 987 ~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1066 (1623)
+
T Consensus 237 ------------------------------~------------------------------------------------- 237 (501)
T PRK11288 237 ------------------------------M------------------------------------------------- 237 (501)
T ss_pred ------------------------------h-------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1067 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 1146 (1623)
Q Consensus 1067 ~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1146 (1623)
.
T Consensus 238 ------------------~------------------------------------------------------------- 238 (501)
T PRK11288 238 ------------------V------------------------------------------------------------- 238 (501)
T ss_pred ------------------c-------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccC
Q 000351 1147 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 1226 (1623)
Q Consensus 1147 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~ 1226 (1623)
..... +. .+.+ +.
T Consensus 239 ----------------~~~~~-----------------------------------------~~-----~~~~-~~---- 251 (501)
T PRK11288 239 ----------------GREIG-----------------------------------------DI-----YGYR-PR---- 251 (501)
T ss_pred ----------------CCCcc-----------------------------------------cc-----cccc-cc----
Confidence 00000 00 0000 00
Q ss_pred CCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC
Q 000351 1227 NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 1306 (1623)
Q Consensus 1227 ~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~ 1306 (1623)
+ +....++++|++++ .+++|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++..
T Consensus 252 --~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~ 319 (501)
T PRK11288 252 --P----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDI 319 (501)
T ss_pred --C----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCC
Confidence 0 01124899999742 48999999999999999999999999999999999999999999999999875
Q ss_pred CCh-HHhhhceEEEcCCCc---ccc-ccHHhhcCCCCC---------CCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhc
Q 000351 1307 FGL-MDLRKILGIIPQSPV---LFS-GTVRFNLDPFSE---------HSDADLWEALERAHLKDAIRRNSLGLD-AQVSE 1371 (1623)
Q Consensus 1307 i~~-~~lR~~i~~vpQdp~---Lf~-gTIr~NLd~~~~---------~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e 1371 (1623)
.+. +..|++++|+||+|. +|. .|+.+|+..... ....+- ...+.++++.+ |++ .....
T Consensus 320 ~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~ 392 (501)
T PRK11288 320 RSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWE-----AENADRFIRSL--NIKTPSREQ 392 (501)
T ss_pred CCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHH-----HHHHHHHHHhc--CcccCCccC
Confidence 443 445778999999973 554 699999864210 011000 11123333332 342 22344
Q ss_pred CCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCc
Q 000351 1372 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSG 1449 (1623)
Q Consensus 1372 ~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G 1449 (1623)
...+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|
T Consensus 393 ~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g 472 (501)
T PRK11288 393 LIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREG 472 (501)
T ss_pred ccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECC
Confidence 456799999999999999999999999999999999999999999998864 47899999999999977 9999999999
Q ss_pred eEeeecChhHHh
Q 000351 1450 RVLEYDTPEELL 1461 (1623)
Q Consensus 1450 ~ive~Gtp~eLl 1461 (1623)
++++.|++++..
T Consensus 473 ~i~~~~~~~~~~ 484 (501)
T PRK11288 473 RIAGELAREQAT 484 (501)
T ss_pred EEEEEEccccCC
Confidence 999999988754
No 66
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1e-62 Score=628.92 Aligned_cols=501 Identities=21% Similarity=0.229 Sum_probs=399.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 295 LNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIY-AFSIFVGVVLGVLCEAQYFQNVMRVGFRLR 373 (1623)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir 373 (1623)
..+.+++.++...++.++..++..+.|++++.+++.+..... ...+.+ +.+++++.++..++.....+...+.+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 7 LLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777888888899999999999999999987654322 111111 111222333444444445556667888999
Q ss_pred HHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000351 374 STLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVF 452 (1623)
Q Consensus 374 ~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~ 452 (1623)
..++..+|+|.++++....++.++|++++++++|++.+.+.+. .+..+....+.+++++++++...+..+++.++.+++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~ 165 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLL 165 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999988999999999999999999998765 344555555556666665555555555555554444
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 453 MFPVQTFIIS-RMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILN 531 (1623)
Q Consensus 453 ~~~~~~~~~~-~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~ 531 (1623)
+..+..++.+ ..++..++..+..++..+.+.|.++|+++||.|++|+.+.+++++..++..+...+..........+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (529)
T TIGR02868 166 AGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQL 245 (529)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444434443 345566777788899999999999999999999999999999999888777776666665555544444
Q ss_pred HHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC---C
Q 000351 532 SIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPN---P 606 (1623)
Q Consensus 532 ~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~---~ 606 (1623)
....+ +.++.++.+.+..|.++++.+.+.+.+...+..|+..++..+..+.++.++++|+.++++.++...... +
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~ 325 (529)
T TIGR02868 246 LAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAA 325 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC
Confidence 43332 233455666677889999999999999999999999999999999999999999999998665321111 0
Q ss_pred -CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC------
Q 000351 607 -PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG------ 679 (1623)
Q Consensus 607 -~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~------ 679 (1623)
...+....|+++|++|+|++ ++++|+|+||+|++||+++||||||||||||+++|+|+++|++| .+.+.+
T Consensus 326 ~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G-~I~i~g~~i~~~ 402 (529)
T TIGR02868 326 GALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQG-EVTLDGVSVSSL 402 (529)
T ss_pred cccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-EEEECCEEhhhH
Confidence 01112346999999999974 34799999999999999999999999999999999999999999 665554
Q ss_pred ------cEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 680 ------TVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 680 ------~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
.||||||+|++|++||||||.+|.+ .++++++++++.|+++++++.+|+|++|.+||+|.+||||||||++||
T Consensus 403 ~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiA 482 (529)
T TIGR02868 403 QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALA 482 (529)
T ss_pred HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHH
Confidence 7999999999999999999999864 688999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCc
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 800 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~ 800 (1623)
||++++|+|+|||||||+||+++++.|.+.+. ...+++|+|+||||+
T Consensus 483 Rall~~~~iliLDE~TSaLD~~te~~I~~~l~-~~~~~~TvIiItHrl 529 (529)
T TIGR02868 483 RALLADAPILLLDEPTEHLDAGTESELLEDLL-AALSGKTVVVITHHL 529 (529)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH-HhcCCCEEEEEecCC
Confidence 99999999999999999999999999998765 456789999999985
No 67
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.1e-62 Score=629.03 Aligned_cols=527 Identities=20% Similarity=0.295 Sum_probs=424.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 000351 311 IGNDLSQFVGPLLLNQLLQSMQQDGP-AWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRITH 389 (1623)
Q Consensus 311 l~~~~~~~~~P~ll~~li~~l~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i~~K~l~l~~ 389 (1623)
++..++..+.|++++.+++.+..... ....+.+++.++++.++..++.....+...+.+.++...++..+|+|.++++.
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 45666778899999999998754321 11222334444444445555555555566678889999999999999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 390 EARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGV-ASLLGALLLVFMFPVQTFIISRMQKL 467 (1623)
Q Consensus 390 ~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~-~~l~g~~~~~~~~~~~~~~~~~~~~~ 467 (1623)
....+.++|++++++++|++.+..... .+..++..++.+++++++++..++| .+++.++++++.+.+...+.+++.+.
T Consensus 85 ~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 164 (569)
T PRK10789 85 EFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHER 164 (569)
T ss_pred HHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988889999999999999999987543 4555555555555555544334444 55565666666666677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000351 468 TKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV--LVTVVSFGMF 545 (1623)
Q Consensus 468 ~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~--~~~~~~f~~~ 545 (1623)
.++..+..++..+.+.|.++|+++||.|++|+.+.+++.+..++..+...+..........+...... .+.++.+|.+
T Consensus 165 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 244 (569)
T PRK10789 165 FKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSW 244 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999998888877666555544444444433333222222 2234456667
Q ss_pred HHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcEEEEeeEEEcC
Q 000351 546 TLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWD 625 (1623)
Q Consensus 546 ~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~ 625 (1623)
.+.++.+|++.+++++.++..+..|+..++..+..+.++.++.+||.++++.++...............|+++|++|+|+
T Consensus 245 lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~I~~~~v~~~y~ 324 (569)
T PRK10789 245 MVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVPEGRGELDVNIRQFTYP 324 (569)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCcEEEEEEEEECC
Confidence 77788999999999999999999999999999999999999999999999865432111111111234699999999997
Q ss_pred CCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCcEEEEccCcccCc
Q 000351 626 SKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTVAYVPQVSWIFN 692 (1623)
Q Consensus 626 ~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~iay~~Q~~~l~~ 692 (1623)
.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+ +..|+||+|+|++|+
T Consensus 325 ~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G-~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~ 402 (569)
T PRK10789 325 QT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEG-DIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS 402 (569)
T ss_pred CC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCC-EEEECCEEHhhCCHHHHHhheEEEccCCeecc
Confidence 53 46799999999999999999999999999999999999999999 4433 246999999999999
Q ss_pred ccHHHHHhcCC-CCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCc
Q 000351 693 ATVRDNILFGS-AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSAL 771 (1623)
Q Consensus 693 ~Tv~enI~~g~-~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~L 771 (1623)
+||+|||.++. +.++++++++++.+++.+++..+|+|++|.+|++|.+||||||||++||||++++|+++|||||||+|
T Consensus 403 ~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~L 482 (569)
T PRK10789 403 DTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAV 482 (569)
T ss_pred ccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccC
Confidence 99999999985 46888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhh
Q 000351 772 DAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 840 (1623)
Q Consensus 772 D~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 840 (1623)
|+++++.+.+.+.. ..+|+|+|+|||+++.++.||+|++|++|+++++|+++++.++.+.|+++...+
T Consensus 483 D~~~~~~i~~~l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 483 DGRTEHQILHNLRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred CHHHHHHHHHHHHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 99999999987644 457899999999999999999999999999999999999999888888877643
No 68
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.8e-62 Score=625.63 Aligned_cols=522 Identities=21% Similarity=0.268 Sum_probs=419.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 298 SLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLV 377 (1623)
Q Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~ 377 (1623)
.+++.++..+++.++..++..+.|++++.+++.+.........+.+++.++++.++..++.....+...+.+.++...++
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667778888889999999999999999999765322222223344445555666677777777778889999999999
Q ss_pred HHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000351 378 AAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQA--LHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFP 455 (1623)
Q Consensus 378 ~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~ 455 (1623)
..+|+|.++++.. ..+...+.+++|++++.+.+.. +..+...++.++.+ ++++...++.+++.++.+++.+.
T Consensus 83 ~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 83 QPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYL-LVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999999863 2345678889999999986543 33444444444333 34444444455554444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 456 VQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV 535 (1623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~ 535 (1623)
+..+..++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++..++..+...+..........+......
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777788888999999999999999999999999999999999999888877666655554444444333333322
Q ss_pred --HHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCC
Q 000351 536 --LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLP 613 (1623)
Q Consensus 536 --~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~ 613 (1623)
.+.++.+|.+.+..|.+|++.+++++.++..+..|+..+...+..+.++..+++||.++++.++...... .......
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~ 315 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PLPEPEG 315 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CCCCCCC
Confidence 2344567777777899999999999999999999999999999999999999999999997655422111 1112234
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|++|+|+++ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+ +..
T Consensus 316 ~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G-~i~~~g~~i~~~~~~~~~~~ 393 (544)
T TIGR01842 316 HLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSG-SVRLDGADLKQWDRETFGKH 393 (544)
T ss_pred eEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEECCEehhhCCHHHHhhh
Confidence 69999999999742 46899999999999999999999999999999999999999999 4433 236
Q ss_pred EEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
++||||+|++|++|++|||.++.+ .+++++.++++.+++++.++.+|+|++|.+|++|.+||||||||++||||++++|
T Consensus 394 i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~ 473 (544)
T TIGR01842 394 IGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDP 473 (544)
T ss_pred eEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999986654 7888999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhh
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
+++|||||||+||+++++.+.+.+.....+|+|+|++||+++.++.||+|++|++|+++++|+++++.+
T Consensus 474 ~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 474 KLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999998866543336899999999999999999999999999999999998864
No 69
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.2e-62 Score=629.03 Aligned_cols=520 Identities=16% Similarity=0.126 Sum_probs=390.2
Q ss_pred HHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 918 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 997 (1623)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~l 997 (1623)
+++.+++.++...+....++.++.+.+....... ..+..++++.++..++.++..++....+.+...+++.++++++
T Consensus 20 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l 96 (555)
T TIGR01194 20 TAFSIALGLAGGLAIIALLASINNAIHEENFLGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKI 96 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444445555555566666666543211101 1222344455666777888888889999999999999999999
Q ss_pred hcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 998 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 1077 (1623)
Q Consensus 998 l~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~ 1077 (1623)
++.|+.||++.++|++++|+++|++.++..+.. +..++..+..++..++++++.+|.+.++++.++++.+.+..+..+.
T Consensus 97 ~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~ 175 (555)
T TIGR01194 97 LGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMG 175 (555)
T ss_pred HcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987753 6666677777777777888888877766555444444444443333
Q ss_pred HHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1078 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD--RMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLT 1155 (1623)
Q Consensus 1078 ~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 1155 (1623)
.++..+......+.+.+.+.|.+.|++++|+|+.++ ...+++.+..+...+.................++..+...+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (555)
T TIGR01194 176 GFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCA 255 (555)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334344444556788899999999999999999853 445555555555544433222222111111222211111111
Q ss_pred HHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccc---cCCCC--C
Q 000351 1156 ATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVI---ESNRP--P 1230 (1623)
Q Consensus 1156 ~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~---~~~~~--~ 1230 (1623)
..+.. ..+..+ .+.+...+.+...+..++..+...+..+.....+.+|+.++.+.+.+++... +.... .
T Consensus 256 ~~~~~-~~~~~t-----~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~ 329 (555)
T TIGR01194 256 LFAAA-MFASID-----AAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLL 329 (555)
T ss_pred HHHHH-HhcCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence 11111 113334 5556666677777888999999999999999999999999976432211110 00000 0
Q ss_pred CCCCCCccEEEEEEEEEeCCC---CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC
Q 000351 1231 PGWPSSGSIKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF 1307 (1623)
Q Consensus 1231 ~~wp~~g~I~~~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i 1307 (1623)
+.....+.|+|+||+|+|++. .+++|+|+||+|++||++|||||||||||||+++|.|+++|++|+|.+||+|++++
T Consensus 330 ~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~ 409 (555)
T TIGR01194 330 AHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSAD 409 (555)
T ss_pred ccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC
Confidence 111234679999999999653 23699999999999999999999999999999999999999999999999999999
Q ss_pred ChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1308 GLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1308 ~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+.+++|+++++|||||.+|++|+++|+. .+.++++++++++.++++++++++|+|+||. .+||||||||++||
T Consensus 410 ~~~~~~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlala 482 (555)
T TIGR01194 410 SRDDYRDLFSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALI 482 (555)
T ss_pred CHHHHHhhCcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHH
Confidence 9999999999999999999999999974 3568899999999999999999999999994 68999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHH-H-cCCcEEEEeecCchhhhccCEEEEEeCceEeee
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIRE-E-FKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~-~-~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1454 (1623)
||++++|+|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 483 Rall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 483 CAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999987643 3 368999999999999999999999999999875
No 70
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.7e-64 Score=689.65 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHhh--cCCCCCCccccCCCCCCCCCCCc--cEEEEEEEEEeC--CCCCCcccceeeEeCCCCEEEE
Q 000351 1198 SLAENSLNAVERVGNYI--ELPSEAPLVIESNRPPPGWPSSG--SIKFEDVVLRYR--PELPPVLHGLSFTIPPSDKVGI 1271 (1623)
Q Consensus 1198 ~~~e~~~~aveRi~~~~--~~~~e~~~~~~~~~~~~~wp~~g--~I~~~nVs~~Y~--~~~~~vL~~isl~I~~GekvgI 1271 (1623)
...|+.+.++||..++. +.+.|.+.......++. ..| .++++||+++|+ ++.+++|+|||++|+|||++||
T Consensus 718 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI 794 (1394)
T TIGR00956 718 ETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTAL 794 (1394)
T ss_pred cccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEE
Confidence 34555667888887652 23333322111111111 133 479999999985 3335799999999999999999
Q ss_pred ecCCCCChhhHHHHhhcccc---CCCcEEEECCEecCCCChHHhhhceEEEcCCCccc-cccHHhhcCCC------CCCC
Q 000351 1272 VGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF-SGTVRFNLDPF------SEHS 1341 (1623)
Q Consensus 1272 vGrsGSGKSTLl~lL~rl~~---p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf-~gTIr~NLd~~------~~~s 1341 (1623)
+||||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.++ ..||||||++. ...+
T Consensus 795 ~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~ 870 (1394)
T TIGR00956 795 MGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVS 870 (1394)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999997 78899999999985 25788999999998654 56999999732 1233
Q ss_pred HHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc-EEEEeCCCCCCCHHHHHHHHH
Q 000351 1342 DAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK-ILVLDEATAAVDVRTDALIQK 1416 (1623)
Q Consensus 1342 d~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~-ILlLDEpTS~LD~~Te~~Iq~ 1416 (1623)
+++ +.++++..++.+ -.|+.+++.|.+||||||||++|||||+.+|+ ||+||||||+||+.+...|++
T Consensus 871 ~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~ 943 (1394)
T TIGR00956 871 KSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICK 943 (1394)
T ss_pred HHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHH
Confidence 333 455666666543 35788888888999999999999999999997 999999999999999999999
Q ss_pred HHHHH-cCCcEEEEeecCchhh--hccCEEEEEeCc-eEeeecChhH
Q 000351 1417 TIREE-FKSCTMLIIAHRLNTI--IDCDRILLLDSG-RVLEYDTPEE 1459 (1623)
Q Consensus 1417 ~L~~~-~~~~TvI~IaHrl~ti--~~~DrI~Vl~~G-~ive~Gtp~e 1459 (1623)
.|++. .+|+|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 944 ~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 944 LMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99987 4689999999999974 459999999997 9999999854
No 71
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.9e-61 Score=618.15 Aligned_cols=539 Identities=18% Similarity=0.234 Sum_probs=432.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 295 LNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRS 374 (1623)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~ 374 (1623)
.++.+++.++..+++.++..++..+.|++++.+++.+...... ..+++..++..++..+......+...++..++|.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888889999999999999999999999977543221 1111111122223333333334456678888999
Q ss_pred HHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000351 375 TLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFM 453 (1623)
Q Consensus 375 ~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~ 453 (1623)
.++..+|+|.++++....++.++|++++++++|++.+.+.+. .+..+...++.+++.+++++...+..+++.++++++.
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~ 169 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILY 169 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987653 3444455555555555555555555566656666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 454 FPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSI 533 (1623)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~ 533 (1623)
+.+..++.+++++..++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++..+...+..........+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (585)
T TIGR01192 170 ILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMA 249 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677788888888888888899999999999999999999999999988888777665444444433333333332222
Q ss_pred HH--HHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--CCC
Q 000351 534 PV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP--PLT 609 (1623)
Q Consensus 534 ~~--~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~--~~~ 609 (1623)
.. .+.++.+|.+.+..+.++++.+++++.++..+..|+..+...+..+.++..+++|+.++++.++....... ...
T Consensus 250 ~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~ 329 (585)
T TIGR01192 250 STISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAPELP 329 (585)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCCCCC
Confidence 22 23445567777778899999999999999999999999999999999999999999999876543211111 111
Q ss_pred CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------
Q 000351 610 SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------ 677 (1623)
Q Consensus 610 ~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------ 677 (1623)
.....++++|++|+|++ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+
T Consensus 330 ~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G-~i~~~g~~~~~~~~~~ 406 (585)
T TIGR01192 330 NVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG-QILIDGIDINTVTRES 406 (585)
T ss_pred CCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC-EEEECCEEhhhCCHHH
Confidence 12346999999999974 35799999999999999999999999999999999999999999 4433
Q ss_pred -cCcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 678 -RGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 678 -~~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
+..++||||+|++|++|++|||.++.+ .++++..++++.+++.+.+..+|+|.+|.+|++|.+||||||||++||||+
T Consensus 407 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARal 486 (585)
T TIGR01192 407 LRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAI 486 (585)
T ss_pred HHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHH
Confidence 246999999999999999999999854 577888899999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHH
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQK 835 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 835 (1623)
+++|+++|||||||+||+++++.+.+.+. ...+++|+|+|||+++.++.||+|++|++|+++++|+++++.++++.|.+
T Consensus 487 l~~p~ililDEpts~LD~~~~~~i~~~l~-~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~ 565 (585)
T TIGR01192 487 LKNAPILVLDEATSALDVETEARVKNAID-ALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRFYK 565 (585)
T ss_pred hcCCCEEEEECCccCCCHHHHHHHHHHHH-HHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChHHH
Confidence 99999999999999999999999987654 44578999999999999999999999999999999999999999888988
Q ss_pred hHHhh
Q 000351 836 LMENA 840 (1623)
Q Consensus 836 ~~~~~ 840 (1623)
+...+
T Consensus 566 l~~~~ 570 (585)
T TIGR01192 566 LLRRS 570 (585)
T ss_pred HHHhC
Confidence 87644
No 72
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-64 Score=638.29 Aligned_cols=435 Identities=21% Similarity=0.324 Sum_probs=327.6
Q ss_pred EEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------CcEE
Q 000351 617 IRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------GTVA 682 (1623)
Q Consensus 617 ~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------~~ia 682 (1623)
++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+. ..++
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~~~~~i~ 76 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSG-SILFQGKEIDFKSSKEALENGIS 76 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCce-EEEECCEECCCCCHHHHHhCCEE
Confidence 3688999963 5799999999999999999999999999999999999999998 43322 3599
Q ss_pred EEccCcccC-cccHHHHHhcCCC------CCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGSA------FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~~------~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
|++|++.++ +.||+||+.++.. .+.+ +..++++.+++.. .......+|||||||||+|
T Consensus 77 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qrv~l 145 (491)
T PRK10982 77 MVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-----------DPRAKVATLSVSQMQMIEI 145 (491)
T ss_pred EEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHHHHHHHH
Confidence 999999875 6799999987631 1222 2223333333321 1233456899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||||+.+|+++||||||++||+.+.+++++.+.....+|+|+|++||+++++. .||+|++|++|++++.|+.+++...
T Consensus 146 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~- 224 (491)
T PRK10982 146 AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD- 224 (491)
T ss_pred HHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-
Confidence 99999999999999999999999999998866554446899999999999886 5899999999999877654321000
Q ss_pred hhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHHHHHH
Q 000351 831 ELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKD 910 (1623)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 910 (1623)
+ ...
T Consensus 225 --------------------------------------------------------------~--------------~~~ 228 (491)
T PRK10982 225 --------------------------------------------------------------K--------------IIA 228 (491)
T ss_pred --------------------------------------------------------------H--------------HHH
Confidence 0 000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 911 ALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLH 990 (1623)
Q Consensus 911 ~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh 990 (1623)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 991 DAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAA 1070 (1623)
Q Consensus 991 ~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i 1070 (1623)
++
T Consensus 229 -------------------------~~----------------------------------------------------- 230 (491)
T PRK10982 229 -------------------------MM----------------------------------------------------- 230 (491)
T ss_pred -------------------------HH-----------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1071 YLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL 1150 (1623)
Q Consensus 1071 ~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 1150 (1623)
+
T Consensus 231 ---~---------------------------------------------------------------------------- 231 (491)
T PRK10982 231 ---V---------------------------------------------------------------------------- 231 (491)
T ss_pred ---h----------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCC
Q 000351 1151 MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 1230 (1623)
Q Consensus 1151 ~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~ 1230 (1623)
+. . . .+ ..+.+. .+
T Consensus 232 -------------~~-~-----~----------------------------------~~-----~~~~~~-------~~- 245 (491)
T PRK10982 232 -------------GR-S-----L----------------------------------TQ-----RFPDKE-------NK- 245 (491)
T ss_pred -------------CC-C-----c----------------------------------cc-----cccccc-------CC-
Confidence 00 0 0 00 000000 00
Q ss_pred CCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH
Q 000351 1231 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1231 ~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~ 1310 (1623)
+.+..|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+..
T Consensus 246 ---~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 318 (491)
T PRK10982 246 ---PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNAN 318 (491)
T ss_pred ---CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHH
Confidence 011248999999975 2599999999999999999999999999999999999999999999999999876654
Q ss_pred H-hhhceEEEcCCCc---ccc-ccHHhh-----cCCCCC----CCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCC
Q 000351 1311 D-LRKILGIIPQSPV---LFS-GTVRFN-----LDPFSE----HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGEN 1375 (1623)
Q Consensus 1311 ~-lR~~i~~vpQdp~---Lf~-gTIr~N-----Ld~~~~----~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~ 1375 (1623)
. +|+.++|+||++. +|. .|+++| +..+.. .+..+.. ....++++.+ |+. ........+
T Consensus 319 ~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~ 391 (491)
T PRK10982 319 EAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSM--RVKTPGHRTQIGS 391 (491)
T ss_pred HHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhc--CccCCCccccccc
Confidence 3 5677999999963 565 377666 321111 1111111 1123344443 331 123444567
Q ss_pred CChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1376 LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++.
T Consensus 392 LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~ 471 (491)
T PRK10982 392 LSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAG 471 (491)
T ss_pred CCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998754 57999999999999976 99999999999998
Q ss_pred ecChhHH
Q 000351 1454 YDTPEEL 1460 (1623)
Q Consensus 1454 ~Gtp~eL 1460 (1623)
.++++++
T Consensus 472 ~~~~~~~ 478 (491)
T PRK10982 472 IVDTKTT 478 (491)
T ss_pred EEccccC
Confidence 8877543
No 73
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-63 Score=643.06 Aligned_cols=200 Identities=22% Similarity=0.357 Sum_probs=165.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 5999999999964 36999999999999999999999999999999999999999999999741 2699
Q ss_pred EEcCCC--cccc-ccHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1318 IIPQSP--VLFS-GTVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1318 ~vpQdp--~Lf~-gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
|+||++ .+.. .|+.+++... ....++++.+.|+..++.. ..+......||||||||++||||++++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 999985 3443 3787776321 1222344555555544321 123334457999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEe-eecChhHHhh
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELLS 1462 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~Gtp~eLl~ 1462 (1623)
|+||||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ ..|+++++.+
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999999985 4599999999999987 9999999999998 6799999853
No 74
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.6e-64 Score=638.76 Aligned_cols=438 Identities=25% Similarity=0.339 Sum_probs=330.8
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.|+++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|.. ... ..
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i-~~~~~~~~~~~~~~~~~~ 78 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGER-QSQFSHITRLSFEQLQKL 78 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceE-EECCcccccCCHHHHHHH
Confidence 4899999999963 469999999999999999999999999999999999999999843 321 23
Q ss_pred EEEEccCccc---------CcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 681 VAYVPQVSWI---------FNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 681 iay~~Q~~~l---------~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
++|++|++.+ +..|+++|+.++.. +.++..+.++..++.+..+.. ..+|||||||||+|
T Consensus 79 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~l 146 (490)
T PRK10938 79 VSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALLDRR-----------FKYLSTGETRKTLL 146 (490)
T ss_pred hceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhhhCC-----------cccCCHHHHHHHHH
Confidence 8999998753 14699999876521 234566777777775444333 35899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|||++.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++++. .||+|++|++|+++..|+++++....
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 99999999999999999999999999999876554445899999999999876 48999999999999888766543110
Q ss_pred hhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHHHHHH
Q 000351 831 ELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKD 910 (1623)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 910 (1623)
. ...
T Consensus 227 ~-~~~--------------------------------------------------------------------------- 230 (490)
T PRK10938 227 L-VAQ--------------------------------------------------------------------------- 230 (490)
T ss_pred h-hhh---------------------------------------------------------------------------
Confidence 0 000
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 911 ALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLH 990 (1623)
Q Consensus 911 ~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh 990 (1623)
..+
T Consensus 231 -~~~---------------------------------------------------------------------------- 233 (490)
T PRK10938 231 -LAH---------------------------------------------------------------------------- 233 (490)
T ss_pred -hhh----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 991 DAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAA 1070 (1623)
Q Consensus 991 ~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i 1070 (1623)
T Consensus 234 -------------------------------------------------------------------------------- 233 (490)
T PRK10938 234 -------------------------------------------------------------------------------- 233 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1071 YLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL 1150 (1623)
Q Consensus 1071 ~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 1150 (1623)
.+. +.+
T Consensus 234 -------~~~-------------------~~~------------------------------------------------ 239 (490)
T PRK10938 234 -------SEQ-------------------LEG------------------------------------------------ 239 (490)
T ss_pred -------hhc-------------------cCc------------------------------------------------
Confidence 000 000
Q ss_pred HHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CCccccCCCC
Q 000351 1151 MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSE-APLVIESNRP 1229 (1623)
Q Consensus 1151 ~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e-~~~~~~~~~~ 1229 (1623)
. +.+.. .+.. ... .
T Consensus 240 ---------------~------------------------------------------------~~~~~~~~~~-~~~-~ 254 (490)
T PRK10938 240 ---------------V------------------------------------------------QLPEPDEPSA-RHA-L 254 (490)
T ss_pred ---------------c------------------------------------------------ccCccccccc-ccc-c
Confidence 0 00000 0000 000 0
Q ss_pred CCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-CCcEEEECCEecCC-C
Q 000351 1230 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-ERGRILIDGFDIAK-F 1307 (1623)
Q Consensus 1230 ~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-~~G~I~IdG~di~~-i 1307 (1623)
+ .....|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|.|+.+| ++|+|.++|.++.. .
T Consensus 255 ~---~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~ 329 (490)
T PRK10938 255 P---ANEPRIVLNNGVVSYNDR--PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGE 329 (490)
T ss_pred C---CCCceEEEeceEEEECCe--eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCC
Confidence 0 011249999999999643 699999999999999999999999999999999998875 69999999987632 2
Q ss_pred ChHHhhhceEEEcCCCcccc---ccHHhhcCC--CC------CCCH---HHHHHHHHHhcHHHHHHhccCCcch-hhhcC
Q 000351 1308 GLMDLRKILGIIPQSPVLFS---GTVRFNLDP--FS------EHSD---ADLWEALERAHLKDAIRRNSLGLDA-QVSEA 1372 (1623)
Q Consensus 1308 ~~~~lR~~i~~vpQdp~Lf~---gTIr~NLd~--~~------~~sd---~~i~~aL~~~~l~~~i~~lp~gLdt-~v~e~ 1372 (1623)
+....|++++|+||++.++. .|+++++.. +. ...+ +++.++++..++ +. .....
T Consensus 330 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~ 398 (490)
T PRK10938 330 TIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGI-----------DKRTADAP 398 (490)
T ss_pred CHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCC-----------chhhccCc
Confidence 33456788999999986642 367777642 11 1111 234444444443 33 33344
Q ss_pred CCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC-C-cEEEEeecCchhhhc--cCEEEEEeC
Q 000351 1373 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-S-CTMLIIAHRLNTIID--CDRILLLDS 1448 (1623)
Q Consensus 1373 G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~-~TvI~IaHrl~ti~~--~DrI~Vl~~ 1448 (1623)
...||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ + .|||+|||+++.+.. ||+|++|++
T Consensus 399 ~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 399 FHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPD 478 (490)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecC
Confidence 467999999999999999999999999999999999999999999998753 4 479999999999975 799999999
Q ss_pred ceEeeec
Q 000351 1449 GRVLEYD 1455 (1623)
Q Consensus 1449 G~ive~G 1455 (1623)
|+|++.-
T Consensus 479 G~i~~~~ 485 (490)
T PRK10938 479 GDIYRYV 485 (490)
T ss_pred CceEEee
Confidence 9998763
No 75
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.4e-63 Score=634.87 Aligned_cols=200 Identities=24% Similarity=0.298 Sum_probs=164.1
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
..|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+|
T Consensus 323 ~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 359999999999643 699999999999999999999999999999999999999999999964 2 169
Q ss_pred EEEcCCC-ccccc-cHHhhcCCCCC---C--CHHHHHHHHHHhcHHHHHHhccCCcch-hhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSP-VLFSG-TVRFNLDPFSE---H--SDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp-~Lf~g-TIr~NLd~~~~---~--sd~~i~~aL~~~~l~~~i~~lp~gLdt-~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+|+||++ .++.. |+++|+..... . .+.+..++++.. |+.. ........||||||||++|||
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~LSgG~~qrv~la~ 458 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRF-----------NFKGGDQQKKVGVLSGGERNRLHLAK 458 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhC-----------CCChhHhcCchhhCCHHHHHHHHHHH
Confidence 9999997 56654 99999964211 1 122233334443 3322 233445679999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeC-ceEee-ecChhHHhh
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDS-GRVLE-YDTPEELLS 1462 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-G~ive-~Gtp~eLl~ 1462 (1623)
|++.+|+||||||||++||+.+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++.+ .|+++++++
T Consensus 459 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 459 TLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred HHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 999999999999999999999999999999985 3 499999999999877 999999996 88875 577777654
No 76
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-61 Score=566.80 Aligned_cols=541 Identities=23% Similarity=0.327 Sum_probs=413.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 292 LRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPA--WIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVG 369 (1623)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 369 (1623)
++..++ .++.++.+++..++..+....--++=+++|..-.-.... ..-+.-+.+.=...++.++....-...+....
T Consensus 8 i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~At 86 (573)
T COG4987 8 LRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDAT 86 (573)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 333344 666777777766655544444333334444322111110 11111111111223334444333333456778
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhHHHHHHH
Q 000351 370 FRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVL--LYNELGVASLLGA 447 (1623)
Q Consensus 370 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~l--L~~~lg~~~l~g~ 447 (1623)
+++-+.++..+|+|....++.....+..|+++|++..|||.+++.+......+...+.+++++.+ -+.-++.+.++++
T Consensus 87 frvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~ 166 (573)
T COG4987 87 FRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL 166 (573)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999887776666655544443333 3555566777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 448 LLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNS 527 (1623)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~ 527 (1623)
.++++.+.++..+.++.++..++..+.+..-.+.+.|.+.|...++++|.++.+.+.+...-+...+..++...+..+..
T Consensus 167 ~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~ 246 (573)
T COG4987 167 ILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSD 246 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777888888888888888899999999999999999999999988877777777777777777777
Q ss_pred HHHHHHHHHHHH-HHHHHHH-HhCCCcC-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 000351 528 FILNSIPVLVTV-VSFGMFT-LLGGDLT-PARAFTSLSLFAVLRFPLFM-LPNMITQVVNANVSLKRMEEFLLAEEKILL 603 (1623)
Q Consensus 528 ~~~~~~~~~~~~-~~f~~~~-~~~~~lt-~~~~ft~l~l~~~l~~pl~~-l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~ 603 (1623)
++..++..++.+ ..++.-. .-.|..+ +..+...+..|..+. ++.. .|.++....+...|.+|+.+.+.+++....
T Consensus 247 a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~e-af~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~ 325 (573)
T COG4987 247 AILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALE-AFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTF 325 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHH-HHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCC
Confidence 766655444333 2222211 1123344 333333344344333 3322 237888999999999999999988776444
Q ss_pred CCCCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC----
Q 000351 604 PNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG---- 679 (1623)
Q Consensus 604 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~---- 679 (1623)
+.+........++++|++|+|+++ +.++|+|+||++++||+++|+|++|||||||++.|.|.++|++| .+..++
T Consensus 326 ~~~~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G-~i~~~g~~~~ 403 (573)
T COG4987 326 PDEQTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQG-SITLNGVEIA 403 (573)
T ss_pred CccccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCC-eeeECCcChh
Confidence 322122222379999999999864 56899999999999999999999999999999999999999999 544333
Q ss_pred ---------cEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 680 ---------TVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 680 ---------~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
.|++++|.+++|++|+|||+.++++ .++|+..++++.++|++.++..|+|.+|.+||+|..||||||||+
T Consensus 404 ~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRL 483 (573)
T COG4987 404 SLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRL 483 (573)
T ss_pred hCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHH
Confidence 6999999999999999999999976 478999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
+|||+|++|++++||||||.|||+.|++++.+.++. ..+|||+|+|||++..++.+|+|++|++|+|+++|+|++++.+
T Consensus 484 AlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~-~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~ 562 (573)
T COG4987 484 ALARALLHDAPLWLLDEPTEGLDPITERQVLALLFE-HAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLAN 562 (573)
T ss_pred HHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHH-HhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhcc
Confidence 999999999999999999999999999999986654 5679999999999999999999999999999999999999999
Q ss_pred ChhHHHhH
Q 000351 830 GELFQKLM 837 (1623)
Q Consensus 830 ~~~~~~~~ 837 (1623)
++.|.++.
T Consensus 563 ~g~~~~l~ 570 (573)
T COG4987 563 NGRYKRLY 570 (573)
T ss_pred ccHHHHHh
Confidence 89888775
No 77
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.8e-63 Score=632.21 Aligned_cols=476 Identities=24% Similarity=0.280 Sum_probs=329.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--CcEEEEccCcccC
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--GTVAYVPQVSWIF 691 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--~~iay~~Q~~~l~ 691 (1623)
.++++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+. ..|||++|+|+++
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G-~i~~~~~~~i~~v~Q~~~~~ 80 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNG-EARPAPGIKVGYLPQEPQLD 80 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEecCCCEEEEEeccCCCC
Confidence 5899999999962 35799999999999999999999999999999999999999999 55443 4699999999987
Q ss_pred -cccHHHHHhcCCC-------------------CCH--------HHHHHHHHHhCchh-------HHhcCCCCCcccccC
Q 000351 692 -NATVRDNILFGSA-------------------FEP--------ARYEKAIDVTSLQH-------DLDLLPGGDVTEIGE 736 (1623)
Q Consensus 692 -~~Tv~enI~~g~~-------------------~~~--------~~~~~~~~~~~l~~-------~~~~l~~g~~t~ig~ 736 (1623)
+.|++|||.++.. .++ .++.++++.++..+ -++.+.- .....
T Consensus 81 ~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l---~~~~~ 157 (552)
T TIGR03719 81 PTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRC---PPWDA 157 (552)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCC---CcccC
Confidence 5799999987521 010 12333344444321 1222211 11244
Q ss_pred CCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCC
Q 000351 737 RGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEG 815 (1623)
Q Consensus 737 ~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G 815 (1623)
...+|||||||||+||||++.+|+++||||||++||+++.+++.+.+.. . ++|+|+|||+++++.. ||+|++|++|
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~-~--~~tvIiisHd~~~~~~~~d~v~~l~~g 234 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQE-Y--PGTVVAVTHDRYFLDNVAGWILELDRG 234 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHh-C--CCeEEEEeCCHHHHHhhcCeEEEEECC
Confidence 5678999999999999999999999999999999999999999886543 2 3699999999999875 7999999999
Q ss_pred EEE-EecChhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhh
Q 000351 816 MVK-EEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEE 894 (1623)
Q Consensus 816 ~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 894 (1623)
+++ ..|+++++.+..... .. . ..
T Consensus 235 ~i~~~~g~~~~~~~~~~~~---~~------~-----------------------------------------------~~ 258 (552)
T TIGR03719 235 RGIPWEGNYSSWLEQKEKR---LE------Q-----------------------------------------------EE 258 (552)
T ss_pred EEEEecCCHHHHHHHHHHH---HH------H-----------------------------------------------HH
Confidence 976 678888765321000 00 0 00
Q ss_pred hhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHH
Q 000351 895 RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLAN 974 (1623)
Q Consensus 895 ~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~ 974 (1623)
..+..+-
T Consensus 259 --------~~~~~~~----------------------------------------------------------------- 265 (552)
T TIGR03719 259 --------KEESARQ----------------------------------------------------------------- 265 (552)
T ss_pred --------HHHHHHH-----------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHH
Q 000351 975 SYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVST 1054 (1623)
Q Consensus 975 ~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1623)
T Consensus 266 -------------------------------------------------------------------------------- 265 (552)
T TIGR03719 266 -------------------------------------------------------------------------------- 265 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1055 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSI-TRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVN 1133 (1623)
Q Consensus 1055 ~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~-~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~ 1133 (1623)
+++++.... .+.+... ++ ..+
T Consensus 266 ------------------------~~~~~~~~~~~~~~~~~------------~~-~~~--------------------- 287 (552)
T TIGR03719 266 ------------------------KALKRELEWVRSSPKAR------------QA-KSK--------------------- 287 (552)
T ss_pred ------------------------HHHHHHHHHHHhhhhhH------------HH-HHH---------------------
Confidence 000000000 0000000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000351 1134 MGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNY 1213 (1623)
Q Consensus 1134 ~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~ 1213 (1623)
......++..+
T Consensus 288 --------------------------------------------------------------------~~~~~~~~~~~- 298 (552)
T TIGR03719 288 --------------------------------------------------------------------ARLARYEELLS- 298 (552)
T ss_pred --------------------------------------------------------------------HHHHHHHhhhh-
Confidence 00000011110
Q ss_pred hcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC
Q 000351 1214 IELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE 1293 (1623)
Q Consensus 1214 ~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~ 1293 (1623)
..+...+.......+...-+.+..|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|+
T Consensus 299 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~ 375 (552)
T TIGR03719 299 -QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGDK--LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPD 375 (552)
T ss_pred -hcccccCCCceeecCCCCCCCCeEEEEeeEEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC
Confidence 0000000000000000000112359999999999643 6999999999999999999999999999999999999999
Q ss_pred CcEEEECCEecCCCChHHhhhceEEEcCCCc-ccc-ccHHhhcCCCCC---CC--HHHHHHHHHHhcHHHHHHhccCCcc
Q 000351 1294 RGRILIDGFDIAKFGLMDLRKILGIIPQSPV-LFS-GTVRFNLDPFSE---HS--DADLWEALERAHLKDAIRRNSLGLD 1366 (1623)
Q Consensus 1294 ~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~-Lf~-gTIr~NLd~~~~---~s--d~~i~~aL~~~~l~~~i~~lp~gLd 1366 (1623)
+|+|.+++ + .+|+|+||++. ++. .|+++|+..... .. +.+..++++.. |++
T Consensus 376 ~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~-----------~l~ 433 (552)
T TIGR03719 376 SGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRF-----------NFK 433 (552)
T ss_pred CeEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhC-----------CCC
Confidence 99999964 2 16999999973 665 499999964221 11 22233333333 343
Q ss_pred h-hhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEE
Q 000351 1367 A-QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRIL 1444 (1623)
Q Consensus 1367 t-~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~ 1444 (1623)
. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++. . +|||+|||+++.+.. ||+|+
T Consensus 434 ~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~ 511 (552)
T TIGR03719 434 GSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHIL 511 (552)
T ss_pred hhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEE
Confidence 2 233445679999999999999999999999999999999999999999999986 3 599999999999987 99999
Q ss_pred EEeC-ceEeee-cChhHHh
Q 000351 1445 LLDS-GRVLEY-DTPEELL 1461 (1623)
Q Consensus 1445 Vl~~-G~ive~-Gtp~eLl 1461 (1623)
+|++ |+++++ |+++++.
T Consensus 512 ~l~~~~~~~~~~g~~~~~~ 530 (552)
T TIGR03719 512 AFEGDSHVEWFEGNYSEYE 530 (552)
T ss_pred EEECCCeEEEeCCCHHHHH
Confidence 9996 688754 6665554
No 78
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.4e-61 Score=613.84 Aligned_cols=510 Identities=21% Similarity=0.262 Sum_probs=407.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 300 GGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQ-QDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVA 378 (1623)
Q Consensus 300 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~ 378 (1623)
++.++..+++.++..++..+.|++++.+++.+. .......-+.+++.++++.++..++.....+...+++.++...++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888889999999999999999999874 3222122223344444455556666666667778889999999999
Q ss_pred HHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000351 379 AVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFMFPVQ 457 (1623)
Q Consensus 379 ~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~~~~~ 457 (1623)
.+|+|.++++.....+.++|++++++++|++.+++.+. .+..++...+.+++++++++....+.+++.++.+++...+.
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~ 161 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFM 161 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999888899999999999999999998664 45566666655555555555444444444444444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 458 TFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLV 537 (1623)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~ 537 (1623)
.++.++..+..++..+..+++.+.+.|.++|+++||.|+.|+.+.+++++..++..+...+..........+......+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (529)
T TIGR02857 162 ILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLS 241 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777888888888999999999999999999999999999999999887766655554444443443333333322222
Q ss_pred HH--HHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcE
Q 000351 538 TV--VSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAI 615 (1623)
Q Consensus 538 ~~--~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i 615 (1623)
.+ +.++.+.+..+.+|++.+++++.+...+..|+..+...+..+.++.++++||.++++.++......+........|
T Consensus 242 ~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~~~~~~~~~i 321 (529)
T TIGR02857 242 VALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAPVTAAPAPSL 321 (529)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcCCCCCCCCeE
Confidence 21 2234444457889999999999999999999999999999999999999999999975432111111111112469
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------CcEE
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GTVA 682 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ia 682 (1623)
+++|++|+|+++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+. +.|+
T Consensus 322 ~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G-~I~~~g~~i~~~~~~~lr~~i~ 399 (529)
T TIGR02857 322 EFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEG-SIAVNGVPLADADADSWRDQIA 399 (529)
T ss_pred EEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-EEEECCEehhhCCHHHHHhheE
Confidence 999999999753 35899999999999999999999999999999999999999998 44432 3599
Q ss_pred EEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000351 683 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 761 (1623)
Q Consensus 683 y~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~i 761 (1623)
||+|+|++|++||+|||.++.+ .++++..++++.+++.++++.+|+|.+|.+||+|.+||||||||++||||++++|++
T Consensus 400 ~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~i 479 (529)
T TIGR02857 400 WVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPL 479 (529)
T ss_pred EEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999999864 678899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEE
Q 000351 762 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILV 812 (1623)
Q Consensus 762 llLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l 812 (1623)
+|||||||+||+++++.+++.+.. ..+++|+|+|||+++.+..||+|++|
T Consensus 480 lilDE~ts~lD~~~~~~i~~~l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 480 LLLDEPTAHLDAETEALVTEALRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EEEeCcccccCHHHHHHHHHHHHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999886654 45789999999999999999999975
No 79
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.9e-62 Score=631.74 Aligned_cols=200 Identities=22% Similarity=0.345 Sum_probs=164.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDGK--QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECCe--EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 48999999999643 6999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEcCCC-ccccc-cHHhhcCCCC-CC--C--HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1318 IIPQSP-VLFSG-TVRFNLDPFS-EH--S--DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1318 ~vpQdp-~Lf~g-TIr~NLd~~~-~~--s--d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
|++|++ .+++. ||++|+.... .. . +.++.+.++..++. ..........||||||||++||||+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFH----------PKRAMTPVKALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCC----------HHHHhChhhhCCHHHHHHHHHHHHH
Confidence 999986 46654 9999996421 11 1 22333444433331 1123334457999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEe-CceEeee-cChhHHhh
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD-SGRVLEY-DTPEELLS 1462 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-~G~ive~-Gtp~eLl~ 1462 (1623)
+.+|++|||||||++||+.+.+.+.+.|++. ++|||+|||+++.+.. ||+|++|+ +|+|.++ |++++++.
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999999874 5699999999999976 99999998 8999886 88888754
No 80
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-62 Score=552.24 Aligned_cols=452 Identities=28% Similarity=0.474 Sum_probs=347.0
Q ss_pred CcEEEEeeEEEcCCC-CCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCC-----CCCeEE----------
Q 000351 613 PAISIRNGYFSWDSK-AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAV---------- 676 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~-~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~-----~g~~~~---------- 676 (1623)
+.++++|++..|... ....++++|||+|++||.+++||.+|||||-..++++|+++.. +| .+.
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg-~i~f~G~dll~~s 83 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSG-SILFDGEDLLAAS 83 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccc-eeEEcChhhhcCC
Confidence 568999998888632 3467999999999999999999999999999999999999752 22 222
Q ss_pred ------Ec-CcEEEEccCccc-Cc--ccHHHHH----hcCCCCC----HHHHHHHHHHhCchhH---HhcCCCCCccccc
Q 000351 677 ------IR-GTVAYVPQVSWI-FN--ATVRDNI----LFGSAFE----PARYEKAIDVTSLQHD---LDLLPGGDVTEIG 735 (1623)
Q Consensus 677 ------~~-~~iay~~Q~~~l-~~--~Tv~enI----~~g~~~~----~~~~~~~~~~~~l~~~---~~~l~~g~~t~ig 735 (1623)
++ .+|+.++|+|.- .| -||...| ......+ .++..+.++..++.+- ++..|
T Consensus 84 e~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yP-------- 155 (534)
T COG4172 84 ERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYP-------- 155 (534)
T ss_pred HHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCC--------
Confidence 22 369999999974 33 2555544 3333322 2344455666666542 33444
Q ss_pred CCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhhh-cCEEEEEe
Q 000351 736 ERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVH 813 (1623)
Q Consensus 736 ~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~d~i~~l~ 813 (1623)
..|||||||||-||.||..+||+||-||||.|||..+..+|.+.+.... ..|..+++||||+..+.. ||+|+||.
T Consensus 156 ---HeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~ 232 (534)
T COG4172 156 ---HELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQ 232 (534)
T ss_pred ---cccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEe
Confidence 5899999999999999999999999999999999999999998554432 238999999999999875 89999999
Q ss_pred CCEEEEecChhHHhhcCh-hHH-HhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhh
Q 000351 814 EGMVKEEGTFEDLSNNGE-LFQ-KLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIK 891 (1623)
Q Consensus 814 ~G~i~~~g~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (1623)
+|+++|+|+.+++..... .|. .+..
T Consensus 233 ~G~ivE~~~t~~lF~~PqHpYTr~Ll~----------------------------------------------------- 259 (534)
T COG4172 233 HGEIVETGTTETLFAAPQHPYTRKLLA----------------------------------------------------- 259 (534)
T ss_pred ccEEeecCcHHHHhhCCCChHHHHHHh-----------------------------------------------------
Confidence 999999998877754321 010 0000
Q ss_pred HhhhhcccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHH
Q 000351 892 QEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVT 971 (1623)
Q Consensus 892 ~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~ 971 (1623)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHH
Q 000351 972 LANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGI 1051 (1623)
Q Consensus 972 ~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1623)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000351 1052 VSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTL 1131 (1623)
Q Consensus 1052 ~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~ 1131 (1623)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1132 VNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVG 1211 (1623)
Q Consensus 1132 ~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~ 1211 (1623)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCC---------CCCCcccceeeEeCCCCEEEEecCCCCChhhH
Q 000351 1212 NYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSM 1282 (1623)
Q Consensus 1212 ~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrsGSGKSTL 1282 (1623)
..|... .+|..-...--++.+||...|+- +.-.++++|||++++||.+||||+||||||||
T Consensus 260 ---aeP~g~-------~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTl 329 (534)
T COG4172 260 ---AEPSGD-------PPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTL 329 (534)
T ss_pred ---cCCCCC-------CCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchH
Confidence 001000 00000001123667777777631 11258999999999999999999999999999
Q ss_pred HHHhhccccCCCcEEEECCEecCCCChHH---hhhceEEEcCCCc--ccc-ccHHhhcC----CCC-C----CCHHHHHH
Q 000351 1283 LNTLFRIVELERGRILIDGFDIAKFGLMD---LRKILGIIPQSPV--LFS-GTVRFNLD----PFS-E----HSDADLWE 1347 (1623)
Q Consensus 1283 l~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR~~i~~vpQdp~--Lf~-gTIr~NLd----~~~-~----~sd~~i~~ 1347 (1623)
-++|+|+++++ |+|.++|.||...+.++ +|+++-+|+|||+ |-+ .||.+-+. -.. . .-|+.+.+
T Consensus 330 G~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~ 408 (534)
T COG4172 330 GLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIE 408 (534)
T ss_pred HHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHH
Confidence 99999999876 99999999999988776 5889999999997 222 26555432 111 1 23566889
Q ss_pred HHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCc
Q 000351 1348 ALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSC 1425 (1623)
Q Consensus 1348 aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~ 1425 (1623)
||+.+|++.-... .-...+|||||||+|||||++-+|++++||||||+||..-.+.|.+.+++.- .+-
T Consensus 409 aL~EVGLDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~L 478 (534)
T COG4172 409 ALEEVGLDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGL 478 (534)
T ss_pred HHHHcCCChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCC
Confidence 9999888653322 2235799999999999999999999999999999999999999999999865 367
Q ss_pred EEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHHH
Q 000351 1426 TMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1426 TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~ 1470 (1623)
+-++|+|+|..++. ||+|+||.+|+|||+|+.+++.+++...|.+
T Consensus 479 sYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 479 SYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred eEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 99999999999988 9999999999999999999999998776654
No 81
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1e-61 Score=599.26 Aligned_cols=483 Identities=25% Similarity=0.334 Sum_probs=341.0
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC--cEEEEccCcccC
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG--TVAYVPQVSWIF 691 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~--~iay~~Q~~~l~ 691 (1623)
.|.++|++++|+ ++++|+|+||++.+|+++||||+|||||||||++|+|+..|++| .+...+ +|||++|++...
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G-~i~~~~~~~v~~l~Q~~~~~ 78 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSG-EVTRPKGLRVGYLSQEPPLD 78 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCC-eEeecCCceEEEeCCCCCcC
Confidence 589999999995 47899999999999999999999999999999999999999999 554444 799999999997
Q ss_pred -cccHHHHHhcCCCCC---HHHHHHHHH---------------------H----hCchhHHhcCCCCCcccccCCCCccC
Q 000351 692 -NATVRDNILFGSAFE---PARYEKAID---------------------V----TSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 692 -~~Tv~enI~~g~~~~---~~~~~~~~~---------------------~----~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
+.||++.+.-+...- ..+++.... . ......+..+.-.+ ......+||
T Consensus 79 ~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~---~~~~~~~LS 155 (530)
T COG0488 79 PEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPD---EDRPVSSLS 155 (530)
T ss_pred CCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCc---ccCchhhcC
Confidence 569999998763210 011111110 0 00111111121111 133456899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEE-Ee
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVK-EE 820 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~-~~ 820 (1623)
||||.||+|||||..+||+|||||||||||.++.+|+.+.+.. .+| |+|+||||++||+. |++|+.+++|++. +.
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~--~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~ 232 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR--YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYK 232 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEec
Confidence 9999999999999999999999999999999999999987753 356 99999999999997 6999999999765 57
Q ss_pred cChhHHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccc
Q 000351 821 GTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVV 900 (1623)
Q Consensus 821 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v 900 (1623)
|+|+...+....-......
T Consensus 233 Gny~~~~~~r~~~~~~~~~------------------------------------------------------------- 251 (530)
T COG0488 233 GNYSSYLEQKAERLRQEAA------------------------------------------------------------- 251 (530)
T ss_pred CCHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Confidence 7777665332110000000
Q ss_pred hHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 901 SFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLII 980 (1623)
Q Consensus 901 ~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~ 980 (1623)
.|
T Consensus 252 ------~~------------------------------------------------------------------------ 253 (530)
T COG0488 252 ------AY------------------------------------------------------------------------ 253 (530)
T ss_pred ------HH------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHH
Q 000351 981 SSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAI 1060 (1623)
Q Consensus 981 ~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1623)
T Consensus 254 -------------------------------------------------------------------------------- 253 (530)
T COG0488 254 -------------------------------------------------------------------------------- 253 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1061 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 1140 (1623)
Q Consensus 1061 ~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1140 (1623)
.+...++++ ..++ .+++.....
T Consensus 254 --------------~~~~~~~~~------------~~~~----------------i~r~~~~~~---------------- 275 (530)
T COG0488 254 --------------EKQQKELAK------------EQEW----------------IRRGKAAAS---------------- 275 (530)
T ss_pred --------------HHHHHHHHH------------HHHH----------------HHHHHhccc----------------
Confidence 000000000 0000 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCC
Q 000351 1141 AIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNY--IELPS 1218 (1623)
Q Consensus 1141 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~--~~~~~ 1218 (1623)
.....+......+++.+. ...|.
T Consensus 276 -------------------------------------------------------~~k~a~sr~k~l~k~~~~~~~~~~~ 300 (530)
T COG0488 276 -------------------------------------------------------KAKKAKSRIKRLEKLEARLAEERPV 300 (530)
T ss_pred -------------------------------------------------------hHHHHHHHHHHHHHHHhhhhhcccc
Confidence 000011111222333211 11111
Q ss_pred CCCccccCCCCCCC-CCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEE
Q 000351 1219 EAPLVIESNRPPPG-WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRI 1297 (1623)
Q Consensus 1219 e~~~~~~~~~~~~~-wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I 1297 (1623)
.......-..+++. -..+-.++++|++++|.++ +++++++||.|.+|++||||||||+|||||+++|.|...|.+|+|
T Consensus 301 ~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v 379 (530)
T COG0488 301 EEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTV 379 (530)
T ss_pred cccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceE
Confidence 11000000011111 1223468999999999655 579999999999999999999999999999999999999999999
Q ss_pred EECCEecCCCChHHhhhceEEEcCCC-cccc-ccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCC
Q 000351 1298 LIDGFDIAKFGLMDLRKILGIIPQSP-VLFS-GTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 1374 (1623)
Q Consensus 1298 ~IdG~di~~i~~~~lR~~i~~vpQdp-~Lf~-gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~ 1374 (1623)
.++-. -++||.+|+- .++. .|+-+++.... +..+.++...|.+.++..-- +.....
T Consensus 380 ~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~----------~~~~v~ 438 (530)
T COG0488 380 KVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGED----------QEKPVG 438 (530)
T ss_pred EeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHH----------HhCchh
Confidence 88721 3699999998 3443 38888886544 33467788888776654321 122335
Q ss_pred CCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1375 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1375 ~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
.||||||-|+.||+.++.+|++|||||||++||.+|.+.+.++|.+ .+.|||+|||+.+.+.. |++|+++++ ++.+
T Consensus 439 ~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~--f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~ 515 (530)
T COG0488 439 VLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD--FEGTVLLVSHDRYFLDRVATRIWLVED-KVEE 515 (530)
T ss_pred hcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEEEcC-ceeE
Confidence 6999999999999999999999999999999999999999999988 36799999999999998 999999999 8888
Q ss_pred e-cChhHHhhc
Q 000351 1454 Y-DTPEELLSN 1463 (1623)
Q Consensus 1454 ~-Gtp~eLl~~ 1463 (1623)
+ |+++++.+.
T Consensus 516 ~~g~y~~y~~~ 526 (530)
T COG0488 516 FEGGYEDYLEQ 526 (530)
T ss_pred cCCCHHHHHHh
Confidence 8 888888754
No 82
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.2e-60 Score=553.99 Aligned_cols=531 Identities=23% Similarity=0.299 Sum_probs=418.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 304 WWGGFWKIGNDLSQFVGPLLLNQLLQSMQQD--GP--AWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAA 379 (1623)
Q Consensus 304 ~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~--~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~ 379 (1623)
+.+..+.+..-.+...+|++++.+++.+.+. .+ .......+.+++++.++.+++.-...+....+..++-......
T Consensus 33 ~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~ 112 (591)
T KOG0057|consen 33 FPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSD 112 (591)
T ss_pred HHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555678889999999999998632 22 1112334444455555555555444444555666666677788
Q ss_pred HHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHH
Q 000351 380 VFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGALLL-VFMFPVQ 457 (1623)
Q Consensus 380 i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~-~~~~~~~ 457 (1623)
+|++.+.++.....+..+|++.+.|..-...|..++. .+..+....+++.+....+++..|++..+..+.. .....+.
T Consensus 113 vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~T 192 (591)
T KOG0057|consen 113 VFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFT 192 (591)
T ss_pred HHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeE
Confidence 9999999999999999999999999999999988764 5567788888999999999999998755544443 3444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Q 000351 458 TFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSI--PV 535 (1623)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~--~~ 535 (1623)
..+...-.+.+++.+++.++-.+.+-|.|.+..+||.|+-|+...++....-.+.-+...+.....++.++....+ ..
T Consensus 193 i~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~ 272 (591)
T KOG0057|consen 193 IVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVA 272 (591)
T ss_pred EeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHH
Confidence 5666667778889999999999999999999999999999999888876644443333333222223333322221 11
Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcE
Q 000351 536 LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAI 615 (1623)
Q Consensus 536 ~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i 615 (1623)
.+.+...+..-+..+.+|.+......+++..|..|+..+...+..+.++..-+.-.......++.......+....+..|
T Consensus 273 ~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~~~~i~~~~~~I 352 (591)
T KOG0057|consen 273 LTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEAALPIELFGGSI 352 (591)
T ss_pred HHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhccCCcccCCCcE
Confidence 12222223333456789999999999999999999999999999999998888776554443332222111222233469
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCcEE
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTVA 682 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ia 682 (1623)
+|+|++|+|++ ++++|+++||+|++||++||||+|||||||++++|++.++ ++| .+.+ |+.||
T Consensus 353 ~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG-~I~IdG~dik~~~~~SlR~~Ig 428 (591)
T KOG0057|consen 353 EFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSG-SILIDGQDIKEVSLESLRQSIG 428 (591)
T ss_pred EEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCC-cEEECCeeHhhhChHHhhhhee
Confidence 99999999985 5679999999999999999999999999999999999999 788 4433 45699
Q ss_pred EEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000351 683 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 761 (1623)
Q Consensus 683 y~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~i 761 (1623)
||||+..|||+||.+||.+|++ ..+++..++++..++++-+..+|+|++|.+||+|..|||||||||+||||+++||+|
T Consensus 429 ~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~I 508 (591)
T KOG0057|consen 429 VVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPI 508 (591)
T ss_pred EeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCe
Confidence 9999999999999999999986 467888899999999999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHh
Q 000351 762 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 839 (1623)
Q Consensus 762 llLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 839 (1623)
+++|||||+||.+|++.|++.+.+ ...|||+|+|.||++.++.+|+|+++++|++.+.|+|+|++..++.|.+++..
T Consensus 509 l~~DEaTS~LD~~TE~~i~~~i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~ 585 (591)
T KOG0057|consen 509 LLLDEATSALDSETEREILDMIMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTT 585 (591)
T ss_pred EEecCcccccchhhHHHHHHHHHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhcc
Confidence 999999999999999999997665 67899999999999999999999999999999999999999988888877653
No 83
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.6e-59 Score=647.21 Aligned_cols=545 Identities=18% Similarity=0.228 Sum_probs=409.6
Q ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 290 WLLRALNSSLGGRFW-WGGFWKIGNDLSQFVGPLLLNQLLQSMQ-QDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMR 367 (1623)
Q Consensus 290 ~L~~al~~~~~~~~~-~~~~~~l~~~~~~~~~P~ll~~li~~l~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r 367 (1623)
+.++..+++.++..+ ..+++.++..++....|+.++...+.-. +.......+.+ +.+++..++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRL-SVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555543332 2333344555667778888876664321 11111111111 12222222222222222333445
Q ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000351 368 VGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLG 446 (1623)
Q Consensus 368 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g 446 (1623)
.+.+.-..+...+|++.++.+...+++.++|+++|++++|++.+++.+. .+..+...++.++.++++++....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778888899999999999999999999999999999999998664 455666666666666665554444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 447 ALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACN 526 (1623)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~ 526 (1623)
+.++++.+.+..+..+..+..++...+.++...+.++|.++|+++||.|++|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445555555666666666777888899999999999999999999999888777766655544333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC--
Q 000351 527 SFILNSIPVLVTVVSFGMFTL-LGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILL-- 603 (1623)
Q Consensus 527 ~~~~~~~~~~~~~~~f~~~~~-~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~-- 603 (1623)
......+..++ ++..+.+.+ ..+.++++.+..++.+...+..|+..+...+..+..+.+|.+||.++++.+++...
T Consensus 1192 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNCI-VLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 33333222222 122223333 34679999999999999999999999999999999999999999999976543211
Q ss_pred -C-CCCC-CCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---
Q 000351 604 -P-NPPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--- 677 (1623)
Q Consensus 604 -~-~~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--- 677 (1623)
. .++. -+....|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|.++|++| .+.+
T Consensus 1271 ~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G-~I~IdG~ 1348 (1522)
T TIGR00957 1271 QETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEG-EIIIDGL 1348 (1522)
T ss_pred cCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCC-eEEECCE
Confidence 1 1111 1233569999999999753 35799999999999999999999999999999999999999999 4443
Q ss_pred ----------cCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 678 ----------RGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 678 ----------~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
|++|+||||+|.+|+|||||||....++++++++++++.|++.+.++.+|+|.+|.+||+|.+|||||||
T Consensus 1349 dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQ 1428 (1522)
T TIGR00957 1349 NIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQ 1428 (1522)
T ss_pred EccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHH
Confidence 4569999999999999999999833368899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHh
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
|++||||++++|+|+|||||||+||++|++.|.+.+ +...+++|+|+||||++.+..+|+|++|++|+|+|.|+|++|+
T Consensus 1429 rl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l-~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1429 LVCLARALLRKTKILVLDEATAAVDLETDNLIQSTI-RTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHH-HHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999887654 5566899999999999999999999999999999999999999
Q ss_pred hcChhHHHhHHh
Q 000351 828 NNGELFQKLMEN 839 (1623)
Q Consensus 828 ~~~~~~~~~~~~ 839 (1623)
++++.|++++++
T Consensus 1508 ~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1508 QQRGIFYSMAKD 1519 (1522)
T ss_pred hCCCHHHHHHHH
Confidence 888889888765
No 84
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-59 Score=652.30 Aligned_cols=474 Identities=19% Similarity=0.243 Sum_probs=365.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHH
Q 000351 979 IISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLW 1058 (1623)
Q Consensus 979 ~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1623)
...+.+....+...+++++++.|..++++.++|+++||++.|++.++... ..+..+....+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 56677777788889999999999999999999999999999999998865 33444443333333333322221112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1059 AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR 1138 (1623)
Q Consensus 1059 ~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1138 (1623)
+.++++++++.+..++.+..++.++.....+....+.+.|.++|+++||+|++++.+.+++.+..+...+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233333444444455555555566667788899999999999999999999999988877766655444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 000351 1139 WLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 1218 (1623)
Q Consensus 1139 wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~ 1218 (1623)
+..+.......++.++..+......+..+ ++.+-.++++...+..++..+...+..+.....+.+|+.++++.++
T Consensus 525 ~~~~~~~~~~~~~~~~~fg~~~v~~~~lt-----~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~ 599 (1495)
T PLN03232 525 FNSFILNSIPVVVTLVSFGVFVLLGGDLT-----PARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEE 599 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 33332222221111111122222344455 5555566667777778888888999999999999999999997654
Q ss_pred CCCccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEE
Q 000351 1219 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRI 1297 (1623)
Q Consensus 1219 e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I 1297 (1623)
+... . .+ +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++||||||||||||+++|+|+++|++|.+
T Consensus 600 ~~~~---~-~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i 674 (1495)
T PLN03232 600 RILA---Q-NP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSS 674 (1495)
T ss_pred cccc---c-cC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCE
Confidence 3211 0 11 111234579999999999752 3579999999999999999999999999999999999999999876
Q ss_pred EECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCC
Q 000351 1298 LIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1377 (1623)
Q Consensus 1298 ~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LS 1377 (1623)
. .+|++|+||||+|.+|+|||||||.+..++++++++++++.|++.+.++.+|+|+||.+||+|.+||
T Consensus 675 ~------------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LS 742 (1495)
T PLN03232 675 V------------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNIS 742 (1495)
T ss_pred E------------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccC
Confidence 3 3688999999999999999999999888889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHH-HHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecC
Q 000351 1378 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQ-KTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1378 gGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq-~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gt 1456 (1623)
|||||||+||||++++|+|+|||||||+||++|++.|. +.++...+++|+|+||||++++..||+|++|++|+|+|.|+
T Consensus 743 GGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt 822 (1495)
T PLN03232 743 GGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGT 822 (1495)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999999775 55776678999999999999999999999999999999999
Q ss_pred hhHHhhcCCChHHHHHHHhh
Q 000351 1457 PEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1457 p~eLl~~~~~~f~~l~~~~~ 1476 (1623)
|+||+++ ++.|+++++..+
T Consensus 823 ~~eL~~~-~~~~~~l~~~~~ 841 (1495)
T PLN03232 823 FAELSKS-GSLFKKLMENAG 841 (1495)
T ss_pred HHHHHhc-chhHHHHHHhcc
Confidence 9999974 567888876543
No 85
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3.9e-59 Score=596.64 Aligned_cols=471 Identities=16% Similarity=0.136 Sum_probs=353.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHh
Q 000351 964 SFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLL 1043 (1623)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~ 1043 (1623)
.++..++.++..++....+.+...+++.++++++++.|+.||+++++|++++|+++|++.+...+. .+..++..++.++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i 136 (547)
T PRK10522 58 LLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTL 136 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHH
Confidence 333445667778888889999999999999999999999999999999999999999999987554 4556677777777
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHH---HHHHHHHH
Q 000351 1044 STFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY---DRMADING 1120 (1623)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~---~~~~~~~~ 1120 (1623)
..++++++.+|.+.++++.++++.+.+..+..+..+...+...+..+.+.+++.|.++|+.+++ ++.+ +.+.+++.
T Consensus 137 ~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~ 215 (547)
T PRK10522 137 GSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYE 215 (547)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHh
Confidence 8888888888888776666555555555555444444444455667888999999999999995 4432 34556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1121 KSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQ--NGSAENQEAFASTMGLLLSYALNITSLLTAVLRLAS 1198 (1623)
Q Consensus 1121 ~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~ 1198 (1623)
+..+...+.................++... +++++.+.. .+... .+.++....+...+..++..+...+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~pl~~l~~~~~ 287 (547)
T PRK10522 216 PDAQEYRHHIIRADTFHLSAVNWSNIMMLG---AIGLVFYMANSLGWAD-----TNVAATYSLTLLFLRTPLLSAVGALP 287 (547)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555554443322211111111111111111 111111111 01011 22223333333445578888888888
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCC
Q 000351 1199 LAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAG 1278 (1623)
Q Consensus 1199 ~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSG 1278 (1623)
.+.....+.+|+.++.+.+.+.+.. ...+. |..+.|+++||+|+|+++ +++|+|+||+|+|||++||+||||||
T Consensus 288 ~~~~~~~a~~ri~~l~~~~~~~~~~--~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsG 361 (547)
T PRK10522 288 TLLSAQVAFNKLNKLALAPYKAEFP--RPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSG 361 (547)
T ss_pred HHHHHHHHHHHHHHHhccccccccc--ccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCC
Confidence 9999999999999987654432110 11111 123579999999999743 46999999999999999999999999
Q ss_pred hhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHH
Q 000351 1279 KSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAI 1358 (1623)
Q Consensus 1279 KSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i 1358 (1623)
||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||||.+|++|+++| ....+|++++++++++++.+.+
T Consensus 362 KSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~ 438 (547)
T PRK10522 362 KSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKL 438 (547)
T ss_pred HHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhh
Confidence 9999999999999999999999999999999999999999999999999999999 2356788888888888776655
Q ss_pred HhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchh
Q 000351 1359 RRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNT 1436 (1623)
Q Consensus 1359 ~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~t 1436 (1623)
.. ++|. .+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.+.+.. +++|+|+||||+++
T Consensus 439 ~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~ 512 (547)
T PRK10522 439 EL-EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHY 512 (547)
T ss_pred hc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHH
Confidence 42 3332 1478999999999999999999999999999999999999999999997654 48999999999999
Q ss_pred hhccCEEEEEeCceEeee-cChhH
Q 000351 1437 IIDCDRILLLDSGRVLEY-DTPEE 1459 (1623)
Q Consensus 1437 i~~~DrI~Vl~~G~ive~-Gtp~e 1459 (1623)
+..||+|++|++|+++|. |++.+
T Consensus 513 ~~~~d~i~~l~~G~i~e~~~~~~~ 536 (547)
T PRK10522 513 FIHADRLLEMRNGQLSELTGEERD 536 (547)
T ss_pred HHhCCEEEEEECCEEEEecCCchh
Confidence 999999999999999988 44433
No 86
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2e-59 Score=650.66 Aligned_cols=472 Identities=19% Similarity=0.262 Sum_probs=367.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHH
Q 000351 979 IISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLW 1058 (1623)
Q Consensus 979 ~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1623)
...+.+.-..+...+++++++.|..+++..++|+++|+++.|++.++.... .+..+....+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777788899999999999999999999999999999999998763 3444444444444444333332223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1059 AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR 1138 (1623)
Q Consensus 1059 ~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1138 (1623)
+.++++++++.+..++.+..++.++.....+....+.+.|.++|+++||+|++++.+.++..+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444445555555555555555666677788899999999999999999999999988877665554433333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 000351 1139 WLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 1218 (1623)
Q Consensus 1139 wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~ 1218 (1623)
+..+.......++.+++.+......+..+ ++.+-.++++...+..++..+......+.....+.+|+.++.+.++
T Consensus 525 ~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt-----~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e 599 (1622)
T PLN03130 525 FNSFILNSIPVLVTVVSFGVFTLLGGDLT-----PARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEE 599 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 33322222211111122122223345555 5555555666666777888888889999999999999999987544
Q ss_pred CCCccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCC-cE
Q 000351 1219 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER-GR 1296 (1623)
Q Consensus 1219 e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~-G~ 1296 (1623)
+.+. .. ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+
T Consensus 600 ~~~~---~~-~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~ 674 (1622)
T PLN03130 600 RVLL---PN-PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDAS 674 (1622)
T ss_pred cccc---cC-Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCce
Confidence 3211 00 11 01223579999999999743 3579999999999999999999999999999999999999999 89
Q ss_pred EEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCC
Q 000351 1297 ILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1297 I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~L 1376 (1623)
|. +|.+|+||||+|.+|+|||||||.++.++++++++++++.|+++++++.+|+|+||.+||+|.+|
T Consensus 675 I~-------------l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~L 741 (1622)
T PLN03130 675 VV-------------IRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNI 741 (1622)
T ss_pred EE-------------EcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCC
Confidence 97 46789999999999999999999988888999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHH-HHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeec
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALI-QKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~I-q~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1455 (1623)
||||||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|
T Consensus 742 SGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~G 821 (1622)
T PLN03130 742 SGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEG 821 (1622)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999999877 56777777899999999999999999999999999999999
Q ss_pred ChhHHhhcCCChHHHHHHHh
Q 000351 1456 TPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1456 tp~eLl~~~~~~f~~l~~~~ 1475 (1623)
+|+||+++ ++.|++++...
T Consensus 822 t~~eL~~~-~~~~~~l~~~~ 840 (1622)
T PLN03130 822 TYEELSNN-GPLFQKLMENA 840 (1622)
T ss_pred CHHHHHhc-chhHHHHHHhc
Confidence 99999964 56788887654
No 87
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.5e-60 Score=613.17 Aligned_cols=200 Identities=19% Similarity=0.285 Sum_probs=164.5
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
..|+++||+++|+++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++ +.+|
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999643 3699999999999999999999999999999999999999999999875 3479
Q ss_pred EEEcCCCccccccHHhhcC-----CCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhh
Q 000351 1317 GIIPQSPVLFSGTVRFNLD-----PFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1391 (1623)
Q Consensus 1317 ~~vpQdp~Lf~gTIr~NLd-----~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL 1391 (1623)
+|+||++. ...++.+|.. .+...+++++.++|+..++.+. ........||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~----------~~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGN----------LALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChH----------HhcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 2224444421 1223456667777777665421 122334679999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEe-eecChhHHh
Q 000351 1392 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELL 1461 (1623)
Q Consensus 1392 ~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~Gtp~eLl 1461 (1623)
.+|+||||||||++||+.+.+.+.+.|++. ++|||+|||+++.+.. ||||++|++|+++ ..|+++++.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999874 3599999999999987 9999999999998 568877753
No 88
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.6e-58 Score=533.49 Aligned_cols=530 Identities=22% Similarity=0.305 Sum_probs=440.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 289 PWLLRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRV 368 (1623)
Q Consensus 289 ~~L~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 368 (1623)
.....+....++..|+..+++..+-+++.+..|+.+-++.|.+-...+...-..+.+.....+++..++...-.+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777788888999999999999999999999999999987655433344555556666777777777777888999
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000351 369 GFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQA-----LHTLWSAPFRIIISLVLLYNELGVAS 443 (1623)
Q Consensus 369 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~-----~~~~~~~pl~i~i~~~lL~~~lg~~~ 443 (1623)
+.++-..|...||..+++.+..........+. -.|.+.+..++.. +.+..-.|+.+ ..++++..++|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~----LrDL~qvR~Fltg~g~~A~fDaPW~P~yl-~v~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQP----LRDLDQVRQFLTGTGLTAFFDAPWMPLYL-AVIFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccc----hhhHHHHHHHHcCCCcchhcCCchHHHHH-HHHHHHHHHHHHHH
Confidence 99999999999999987554433322222233 3688899887642 33333455544 35678889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 444 LLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLA 523 (1623)
Q Consensus 444 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~ 523 (1623)
++|.++++++..++-++.+ +-.++..+..-++.......+++..+|+.+|+.+...+++.+.....+....+..-..
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9998888888777766654 4456667778888999999999999999999999999999999988888776666555
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000351 524 ACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKI 601 (1623)
Q Consensus 524 ~~~~~~~~~~~~~--~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~ 601 (1623)
.....+....-++ +.++..|.|+...+++|++.+++.-.+..-...|+......+.++..|+.|.+|++++|...+..
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 5555555444444 34456677888899999999999999999999999999999999999999999999999865433
Q ss_pred cCCCCCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----
Q 000351 602 LLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---- 677 (1623)
Q Consensus 602 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---- 677 (1623)
.... +.+..+..+.++++++.-| ..++++++||||++++|+-++||||||||||||.++|.|..+|.+| .+.+
T Consensus 323 ~~~m-~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G-~VRLDga~ 399 (580)
T COG4618 323 AERM-PLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSG-SVRLDGAD 399 (580)
T ss_pred cCCC-CCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCC-cEEecchh
Confidence 2222 1223345799999999755 4568999999999999999999999999999999999999999999 5443
Q ss_pred ---------cCcEEEEccCcccCcccHHHHHh-cCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 678 ---------RGTVAYVPQVSWIFNATVRDNIL-FGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 678 ---------~~~iay~~Q~~~l~~~Tv~enI~-~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
.++|||+||+-.||.|||.|||. |+.+.|++++.++.+.++.++-+-.+|+|++|.||+.|.+|||||||
T Consensus 400 l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQ 479 (580)
T COG4618 400 LRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQ 479 (580)
T ss_pred hhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHH
Confidence 34799999999999999999997 88888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHh
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
||+||||+|.||.+++||||-|+||.+.+..+.+.+..-..+|.|+|+|||+++.+..+|+|.+|++|++...|+.+|++
T Consensus 480 RIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVL 559 (580)
T COG4618 480 RIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVL 559 (580)
T ss_pred HHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHH
Confidence 99999999999999999999999999999999988777777899999999999999999999999999999999999887
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
++
T Consensus 560 a~ 561 (580)
T COG4618 560 AK 561 (580)
T ss_pred HH
Confidence 43
No 89
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.4e-56 Score=621.68 Aligned_cols=469 Identities=19% Similarity=0.210 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000351 370 FRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVASLLGAL 448 (1623)
Q Consensus 370 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~ 448 (1623)
.+....+...+|++.++.+...+++.+.|+++|++++|++.+++.+. .+..++...+.++.++++++...++..++.+.
T Consensus 1027 ~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~ 1106 (1560)
T PTZ00243 1027 RRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVP 1106 (1560)
T ss_pred HHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445677899999999999999999999999999999999999664 45555566666665555554443333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 449 LLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSF 528 (1623)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~ 528 (1623)
++++.+.+..++.+..+..++......+...+.++|.++|+++||.|+.|+.+.++..+.-+...+...+......+...
T Consensus 1107 ~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~ 1186 (1560)
T PTZ00243 1107 CGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGV 1186 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334445555666666666777788899999999999999999999999888876666555443333223333322
Q ss_pred HHHHHHHH--HHHHHHHHHH--HhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC-
Q 000351 529 ILNSIPVL--VTVVSFGMFT--LLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILL- 603 (1623)
Q Consensus 529 ~~~~~~~~--~~~~~f~~~~--~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~- 603 (1623)
....+..+ +.++.++++. ...+.++++.+..++.+...+..|+..+...+..+..+..|++||.++++..+....
T Consensus 1187 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~ 1266 (1560)
T PTZ00243 1187 RVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMP 1266 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 22222111 1111222222 223457888888888888889999999999999999999999999999963221100
Q ss_pred --------------------------C-CCC----CCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCC
Q 000351 604 --------------------------P-NPP----LTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGT 652 (1623)
Q Consensus 604 --------------------------~-~~~----~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~ 652 (1623)
+ .++ ..+....|+++|++|+|+++ .+++|+||||+|++||++||||++
T Consensus 1267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrT 1345 (1560)
T PTZ00243 1267 ELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRT 1345 (1560)
T ss_pred cccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCC
Confidence 0 000 01122469999999999753 356999999999999999999999
Q ss_pred CCChhHHHHHHcCCccCCCCCeEEE-------------cCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCc
Q 000351 653 GEGKTSLISAMLGELPPVSDASAVI-------------RGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSL 719 (1623)
Q Consensus 653 GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l 719 (1623)
|||||||+++|+|.++|++| .+.+ ++.|+|+||+|.||++||||||..+.++++++++++++.|++
T Consensus 1346 GSGKSTLl~lLlrl~~p~~G-~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l 1424 (1560)
T PTZ00243 1346 GSGKSTLLLTFMRMVEVCGG-EIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGL 1424 (1560)
T ss_pred CCCHHHHHHHHhCCCCCCCc-EEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCC
Confidence 99999999999999999998 4443 356999999999999999999987777899999999999999
Q ss_pred hhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcC-CCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcC
Q 000351 720 QHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN-SDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTN 798 (1623)
Q Consensus 720 ~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~-~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH 798 (1623)
.+.+..+|+|.+|.+||+|.+||||||||++|||||+++ |+|+|||||||+||+++++.|.+.+ ....+++|+|+|||
T Consensus 1425 ~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L-~~~~~~~TvI~IAH 1503 (1560)
T PTZ00243 1425 RERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATV-MSAFSAYTVITIAH 1503 (1560)
T ss_pred hHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHH-HHHCCCCEEEEEec
Confidence 999999999999999999999999999999999999996 8999999999999999999997654 45567899999999
Q ss_pred CcchhhhcCEEEEEeCCEEEEecChhHHhhc-ChhHHHhHHhhc
Q 000351 799 QLHFLSQVDRIILVHEGMVKEEGTFEDLSNN-GELFQKLMENAG 841 (1623)
Q Consensus 799 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 841 (1623)
+++.+..||+|++|++|+|++.|+|+||+++ ++.|.+++...+
T Consensus 1504 Rl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1504 RLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred cHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999975 788988887654
No 90
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-59 Score=530.89 Aligned_cols=523 Identities=20% Similarity=0.293 Sum_probs=393.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCc--hHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 310 KIGNDLSQFVGPLLLNQLLQSMQQDGPA--WIGYIYAFSIFVGVV---LGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKS 384 (1623)
Q Consensus 310 ~l~~~~~~~~~P~ll~~li~~l~~~~~~--~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~r~~~~ir~~L~~~i~~K~ 384 (1623)
.++.-++...-|.+.+.+++.+..+... +..+.+.+ +.+.+- +..+..+.-.+...++..-.-..+-..+|++.
T Consensus 224 l~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~-L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHl 302 (790)
T KOG0056|consen 224 LIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVF-LKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHL 302 (790)
T ss_pred HHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHH-HHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHH
Confidence 3444556677899999999988743321 11222222 222111 11233332222222333333336777899999
Q ss_pred hcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHH
Q 000351 385 LRITHEARKNFASGKITNLMTTDAEQLQQVCQA-LHTLWSAPFRIIISLVLLYN-ELGVASLLGALLLVFMFPVQTFIIS 462 (1623)
Q Consensus 385 l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~-~~~~~~~pl~i~i~~~lL~~-~lg~~~l~g~~~~~~~~~~~~~~~~ 462 (1623)
..++....-...+|+++..|..-.+.+. +..+ ...+....+.++++++..+. ...|-.++.++++.+...+...+..
T Consensus 303 h~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTe 381 (790)
T KOG0056|consen 303 HNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITE 381 (790)
T ss_pred HhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeeh
Confidence 9999887777789999999987666655 3322 23444455556666554433 3334555555555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 463 RMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSK----VQNVRNDELSWFRKAQFLAACNSFILNSIPVLVT 538 (1623)
Q Consensus 463 ~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~----i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~~ 538 (1623)
.-.++++++..+-.+-...-.+.+-+..++|.|+.|+...++ |.+..++|.+......++....+.+... .+..
T Consensus 382 WRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l--gll~ 459 (790)
T KOG0056|consen 382 WRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL--GLLA 459 (790)
T ss_pred hhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--HHhh
Confidence 556666666655555556667889999999999999766555 4444444544444433333333322221 1222
Q ss_pred HHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cCCC-CCCCCCCCcEE
Q 000351 539 VVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKI-LLPN-PPLTSGLPAIS 616 (1623)
Q Consensus 539 ~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~-~~~~-~~~~~~~~~i~ 616 (1623)
...+.+|.+..+.+|++...-.++++-.+..|++.+...+..++...+-++|+.+.+++++.. +.|. ++.......|+
T Consensus 460 gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~ 539 (790)
T KOG0056|consen 460 GSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIE 539 (790)
T ss_pred hhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeEE
Confidence 233455666678899999999999999999999999999999999999999999999876653 3333 23333456799
Q ss_pred EEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCcEEE
Q 000351 617 IRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTVAY 683 (1623)
Q Consensus 617 ~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~iay 683 (1623)
++|++|.|++ ++|+|+||||++++|+.+++|||+|+||||++++|.+.++..+| .+.+ +++||.
T Consensus 540 fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sG-sI~iDgqdIrnvt~~SLRs~IGV 616 (790)
T KOG0056|consen 540 FSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSG-SITIDGQDIRNVTQSSLRSSIGV 616 (790)
T ss_pred EEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCc-eEEEcCchHHHHHHHHHHHhcCc
Confidence 9999999986 68999999999999999999999999999999999999999998 4443 456999
Q ss_pred EccCcccCcccHHHHHhcCCCC-CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEE
Q 000351 684 VPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 762 (1623)
Q Consensus 684 ~~Q~~~l~~~Tv~enI~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~il 762 (1623)
|||+..+||.||..||.++++- .+|+..++.++++.++.+-.+|+|+.|.|||+|-.||||+|||||+||+++++|.|+
T Consensus 617 VPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iI 696 (790)
T KOG0056|consen 617 VPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSII 696 (790)
T ss_pred ccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEE
Confidence 9999999999999999999863 567777889999999999999999999999999999999999999999999999999
Q ss_pred EEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc-ChhHHHhHHhh
Q 000351 763 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN-GELFQKLMENA 840 (1623)
Q Consensus 763 lLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 840 (1623)
+|||.|||||.++++.|- .++...++|+|.|+|.|+++.+-+||.|+++++|+|+|.|+|+||.++ ++.|+++++.+
T Consensus 697 lLDEATSALDT~tER~IQ-aaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 697 LLDEATSALDTNTERAIQ-AALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred EEcchhhhcCCccHHHHH-HHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 999999999999999995 567778899999999999999999999999999999999999999987 78899988644
No 91
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.9e-58 Score=627.37 Aligned_cols=211 Identities=26% Similarity=0.339 Sum_probs=174.8
Q ss_pred cEEEEEEEEEeCC-----------CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC--CCcEEEECCEec
Q 000351 1238 SIKFEDVVLRYRP-----------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDI 1304 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~-----------~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p--~~G~I~IdG~di 1304 (1623)
.+.|+||++..+. +...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5899999998741 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCChHHhhhceEEEcCCCccccc-cHHhhcCCC------CCCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCC
Q 000351 1305 AKFGLMDLRKILGIIPQSPVLFSG-TVRFNLDPF------SEHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAG 1373 (1623)
Q Consensus 1305 ~~i~~~~lR~~i~~vpQdp~Lf~g-TIr~NLd~~------~~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G 1373 (1623)
. ....|+.+|||+|++.++.. ||+|||... ...+++ .+.++++..++.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24567889999999988765 999999631 122322 25566676666543 245555333
Q ss_pred -CCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh-h-hccCEEEEEeC-
Q 000351 1374 -ENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-I-IDCDRILLLDS- 1448 (1623)
Q Consensus 1374 -~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~- 1448 (1623)
..||||||||++|||+|+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999875 47999999999984 4 45999999996
Q ss_pred ceEeeecChh
Q 000351 1449 GRVLEYDTPE 1458 (1623)
Q Consensus 1449 G~ive~Gtp~ 1458 (1623)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999874
No 92
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.3e-57 Score=525.35 Aligned_cols=482 Identities=21% Similarity=0.264 Sum_probs=363.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHH
Q 000351 962 LLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQ 1041 (1623)
Q Consensus 962 ~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~ 1041 (1623)
.+.+...++..+++..+...+.+.-.+++...+...+++|..--...+....+ +|++++...+...-...+...--
T Consensus 71 ~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW 146 (580)
T COG4618 71 GLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPW 146 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCch
Confidence 34455777888999999999999999999999999988776544333333333 35556655444322222222222
Q ss_pred HhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHH
Q 000351 1042 LLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGK 1121 (1623)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~ 1121 (1623)
.-..+++++.+.||+.++.+...++++.+..+--...++--+...+....-..+..-+.++..+|+|.|...+..+++.+
T Consensus 147 ~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~ 226 (580)
T COG4618 147 MPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGR 226 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHH
Confidence 33445667777888877766666655555544444444444444445555566778889999999999987666555544
Q ss_pred ----HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1122 ----SMDKNIRYTLVNMGA---NRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVL 1194 (1623)
Q Consensus 1122 ----~~d~~~~~~~~~~~~---~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~ 1194 (1623)
.++.+.+........ .+-+-+.++ ..+..+.+.++ ..+.++ +|.+-..-........++-..+
T Consensus 227 ~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQ---s~iLg~GA~Lv--i~ge~t-----~G~mIA~SIl~gRaLaPid~aI 296 (580)
T COG4618 227 FNAAYLSAQERASDRNGAFGALSRALRMALQ---SAVLGLGAWLV--IKGEIT-----PGMMIAGSILSGRALAPIDLAI 296 (580)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH---HHHHhcceeeE--EcCcCC-----cchhhHHHHHhhhhhccHHHHH
Confidence 444444443333222 222222221 22222222222 233343 2222111112223445777888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecC
Q 000351 1195 RLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGR 1274 (1623)
Q Consensus 1195 ~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGr 1274 (1623)
..|.+.-....|..|+.+..+..++...... -| ..+|.+.+|++++.=++..+|+|+|+||+++|||-+|||||
T Consensus 297 ~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~--LP----~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGP 370 (580)
T COG4618 297 ANWKQFVAARQSYKRLNELLAELPAAAERMP--LP----APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGP 370 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccccCCCC--CC----CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECC
Confidence 9999999999999999999884333211111 11 13689999999997666666999999999999999999999
Q ss_pred CCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhc
Q 000351 1275 TGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAH 1353 (1623)
Q Consensus 1275 sGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~ 1353 (1623)
||||||||.++|.|...|.+|.|.+||-|+++++++++=++|||.|||-.||+|||.|||.-|+ +.+++.|.+|.+.++
T Consensus 371 SgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAg 450 (580)
T COG4618 371 SGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAG 450 (580)
T ss_pred CCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998666 778888999999999
Q ss_pred HHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeec
Q 000351 1354 LKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAH 1432 (1623)
Q Consensus 1354 l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaH 1432 (1623)
.||.|.++|+||||.+|++|..||||||||++||||+..+|++++||||-|+||.+-|+.+.++|.+.. +|+|+|+|||
T Consensus 451 vHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaH 530 (580)
T COG4618 451 VHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAH 530 (580)
T ss_pred hHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999998765 6899999999
Q ss_pred CchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1433 RLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1433 rl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 531 RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 531 RPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred CHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999999999864
No 93
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.5e-55 Score=563.69 Aligned_cols=512 Identities=14% Similarity=0.134 Sum_probs=385.0
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 295 LNS-SLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLR 373 (1623)
Q Consensus 295 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir 373 (1623)
+++ .+++.++.++++.++..++....|.+++.+++...... ... ..+.++ ..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~-~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG-QGS-LFSFGG---LCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-chH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 77888888999999999999999999998876321111 111 111111 222333444445555677888999
Q ss_pred HHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 000351 374 STLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALLLVFM 453 (1623)
Q Consensus 374 ~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~~~ 453 (1623)
..++..+|+|.++++.....+.++|++++++++|++.+++++..+..+....+.+++++++++......+++.++++++.
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~ 165 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIG 165 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999988899999999999999999997755555555566565566555555555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 454 FPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWEN--SFQSKVQNVRNDELSWFRKAQFLAACNSFILN 531 (1623)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~--~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~ 531 (1623)
+.+..+..++..+..++..+..++..+.+.|.++|++++|.++.++ ...+++++..++..+...+..........+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (555)
T TIGR01194 166 TAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQ 245 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666677777778888888999999999999999999999854 33444444444333332222222221111111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cc-CCC-C
Q 000351 532 SIPVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEK---IL-LPN-P 606 (1623)
Q Consensus 532 ~~~~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~---~~-~~~-~ 606 (1623)
....++..+.+. +....+.++.+.+++++.+...+..|+..+...++.+.++.+|++||.++++.++. .. .+. .
T Consensus 246 ~~~~~~~~~~~~-~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~ 324 (555)
T TIGR01194 246 LLFFLLIGCALF-AAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDAD 324 (555)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccc
Confidence 111111111111 11112579999999999999999999999999999999999999999999863211 10 010 0
Q ss_pred -----CCCCCCCcEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-
Q 000351 607 -----PLTSGLPAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR- 678 (1623)
Q Consensus 607 -----~~~~~~~~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~- 678 (1623)
+.......|+++|++|+|++++ .+++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+.
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G-~i~~~g 403 (555)
T TIGR01194 325 NVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEG-EILLDG 403 (555)
T ss_pred cccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc-EEEECC
Confidence 0011224699999999997532 24699999999999999999999999999999999999999999 44332
Q ss_pred ------------CcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 679 ------------GTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 679 ------------~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
..++|++|+|++|++|+++|+ ..+.++++.+++++.+++.++++.+|+|++|. .+||||||
T Consensus 404 ~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~ 476 (555)
T TIGR01194 404 AAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQ 476 (555)
T ss_pred EECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHH
Confidence 359999999999999999996 23456778889999999999999999999984 78999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 820 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~-~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 820 (1623)
||++||||++++|+|+|||||||+||+++++.+.+.+++. ..+|+|+|+|||+++.+..||+|++|++|++++.
T Consensus 477 qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 477 KRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999998877653 3468999999999999999999999999999864
No 94
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.9e-58 Score=586.62 Aligned_cols=191 Identities=21% Similarity=0.286 Sum_probs=161.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+++|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 4899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcCCCccc-cccHHhhcCCCC-CC-CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1318 IIPQSPVLF-SGTVRFNLDPFS-EH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1318 ~vpQdp~Lf-~gTIr~NLd~~~-~~-sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
|+||++.++ +.|+++|+.... .. .+..+.++++..++.+ .......+||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~-----------~~~~~~~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLER-----------LLDKNVKDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHH-----------HHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999998754 569999996421 11 1223445555555443 334445679999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecC
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gt 1456 (1623)
+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999998753 7899999999999876 999999965 8877776
No 95
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.5e-54 Score=598.04 Aligned_cols=472 Identities=16% Similarity=0.221 Sum_probs=367.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000351 365 VMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGVAS 443 (1623)
Q Consensus 365 ~~r~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~~~ 443 (1623)
..+.+.+.-..+...++++.++.+...++..+.|+++|+++.|++.+++.+. .+..+....+.+++.+++++...++..
T Consensus 949 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~ 1028 (1490)
T TIGR01271 949 LVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIF 1028 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777888889999999999999999999999999999999998654 455556666666666666655555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 444 LLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLA 523 (1623)
Q Consensus 444 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~ 523 (1623)
++.+.++++++.+..+..+..+..++.....++...+.+.|.++|+.+||.|++++.+.++..+.-+...+.........
T Consensus 1029 l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1490)
T TIGR01271 1029 IAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTL 1108 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333334444455555556666666677778888999999999999999999999999888877664333222221112
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000351 524 ACNSFILNSIPVL-VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKIL 602 (1623)
Q Consensus 524 ~~~~~~~~~~~~~-~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~ 602 (1623)
.+.......+..+ +.++++ +.+.....+++.+..+++++..+..++..+...+..+..+.+|++||.+|++.++...
T Consensus 1109 ~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~ 1186 (1490)
T TIGR01271 1109 RWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEP 1186 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 2222222211111 111111 1111123455556666666777778888888999999999999999999997654321
Q ss_pred CC-C-----------------CC-CCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHH
Q 000351 603 LP-N-----------------PP-LTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAM 663 (1623)
Q Consensus 603 ~~-~-----------------~~-~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l 663 (1623)
.+ . ++ .-+....|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|
T Consensus 1187 ~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL 1265 (1490)
T TIGR01271 1187 RPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSAL 1265 (1490)
T ss_pred cccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 10 0 00 01223569999999999853 47899999999999999999999999999999999
Q ss_pred cCCccCCCCCeEEE-------------cCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCC
Q 000351 664 LGELPPVSDASAVI-------------RGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGD 730 (1623)
Q Consensus 664 ~G~~~~~~g~~~~~-------------~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~ 730 (1623)
+|+++ .+| .+.+ +++|+|+||+|.+|+|||||||.....+++++.+++++.|++.+.+..+|+|.
T Consensus 1266 ~rl~~-~~G-~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GL 1343 (1490)
T TIGR01271 1266 LRLLS-TEG-EIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKL 1343 (1490)
T ss_pred hhhcC-CCc-EEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCcccc
Confidence 99997 677 4433 45799999999999999999998666788999999999999999999999999
Q ss_pred cccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEE
Q 000351 731 VTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRII 810 (1623)
Q Consensus 731 ~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~ 810 (1623)
+|.|||+|.+||||||||++|||||+++|+|+|||||||+||+++.+.|.+.+ +...+++|+|+|||+++.+..+|+|+
T Consensus 1344 dt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L-~~~~~~~TvI~IaHRl~ti~~~DrIl 1422 (1490)
T TIGR01271 1344 DFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTL-KQSFSNCTVILSEHRVEALLECQQFL 1422 (1490)
T ss_pred ccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHH-HHHcCCCEEEEEecCHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999998755 44567899999999999999999999
Q ss_pred EEeCCEEEEecChhHHhhcChhHHHhHHhhcc
Q 000351 811 LVHEGMVKEEGTFEDLSNNGELFQKLMENAGK 842 (1623)
Q Consensus 811 ~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~ 842 (1623)
+|++|+|++.|+|++|++.++.|.+++++.++
T Consensus 1423 vL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1423 VIEGSSVKQYDSIQKLLNETSLFKQAMSAADR 1454 (1490)
T ss_pred EEECCEEEEeCCHHHHHcCCcHHHHHHHHhCh
Confidence 99999999999999999888889988876543
No 96
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-53 Score=543.52 Aligned_cols=508 Identities=18% Similarity=0.215 Sum_probs=371.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 291 LLRALNSSLGGRFWWGGFWKIGNDLSQFVG-PLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVG 369 (1623)
Q Consensus 291 L~~al~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 369 (1623)
+++.+++.+++.++..+++.++..++.+.. |++.+.+++.+.. .. ..-+.+++.+++.. ++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT-SL-LVLPEFLGLLLLLM----AVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cc-hHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 456777888888999999889988888874 7787888886542 11 11111111111111 22223444455677
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000351 370 FRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALL 449 (1623)
Q Consensus 370 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~ 449 (1623)
.++...++..+|+|.++++....++.++|++++++++|++.+..++..+..++...+.+++++++++...+..+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 78888899999999999999999999999999999999999998766667777888888888777777666677777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 450 LVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYA--WENSFQSKVQNVRNDELSWFRKAQFLAACNS 527 (1623)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~--~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~ 527 (1623)
+++.+.+..++.++..+..++..+..+++.+.+.|.++|++++++.+ .++.+.+++.+..++..+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 77777777888888888888999999999999999999999997432 2234455555444433322222222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 000351 528 FILNSIPVLVTVVSFGMFTLLGG---DLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLP 604 (1623)
Q Consensus 528 ~~~~~~~~~~~~~~f~~~~~~~~---~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~ 604 (1623)
.+..... .+.++.+.+.++ ..+.+.+.....+...+..|+..+...++.+.++..+++||.+++..++....+
T Consensus 237 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 237 NWSNIMM----LGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHHHHH----HHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1111111 111222222111 122222222222233356899999999999999999999999997654322111
Q ss_pred CCCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------
Q 000351 605 NPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------- 677 (1623)
Q Consensus 605 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------- 677 (1623)
.+...+....++++|++|+|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+
T Consensus 313 ~~~~~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G-~i~~~g~~~~~ 389 (547)
T PRK10522 313 RPQAFPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSG-EILLDGKPVTA 389 (547)
T ss_pred cccccCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCe-EEEECCEECCC
Confidence 1111111246999999999974 35799999999999999999999999999999999999999999 4432
Q ss_pred ------cCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 678 ------RGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
+++|+|++|+|.+|++|++|| +...++++.+++++.+++..++.. ++|. .+|.+||||||||++|
T Consensus 390 ~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl~l 460 (547)
T PRK10522 390 EQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRLAL 460 (547)
T ss_pred CCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHHHHH
Confidence 346999999999999999999 445667778888888887766653 3221 2478999999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 820 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 820 (1623)
|||++++|+++|||||||+||+++++.+.+.+..... +|+|+|+|||+++.+..||+|++|++|++++.
T Consensus 461 ARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 461 LLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999887654432 48999999999999999999999999999875
No 97
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-55 Score=524.09 Aligned_cols=437 Identities=25% Similarity=0.369 Sum_probs=336.2
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC-------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG------------- 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~------------- 679 (1623)
+.++++|++++|+. .++|+|+||++.+||+++++|.||+|||||+|+|+|.++|++| .+.+.+
T Consensus 7 ~ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G-~I~~~G~~~~~~sp~~A~~ 82 (500)
T COG1129 7 PLLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSG-EILIDGKPVAFSSPRDALA 82 (500)
T ss_pred ceeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCc-eEEECCEEccCCCHHHHHh
Confidence 46899999999974 6899999999999999999999999999999999999999999 555443
Q ss_pred -cEEEEccCcccC-cccHHHHHhcCCCC-------CHHHHH----HHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 680 -TVAYVPQVSWIF-NATVRDNILFGSAF-------EPARYE----KAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 680 -~iay~~Q~~~l~-~~Tv~enI~~g~~~-------~~~~~~----~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
.|+.+.|+.-|+ +.||.|||.+|++. |..+.. ++++..++..+ ......+||+|||
T Consensus 83 ~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsiaqr 151 (500)
T COG1129 83 AGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIAQR 151 (500)
T ss_pred CCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHHHH
Confidence 499999999985 89999999988643 323222 22222222211 2334467999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh-h
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF-E 824 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~-~ 824 (1623)
|-|+||||+..+++|+|||||||+|+.+..+.+|+.+.+...+|.++|+|||+++++. -||||.||.||+.+..++. .
T Consensus 152 Q~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~ 231 (500)
T COG1129 152 QMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAA 231 (500)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeeccccc
Confidence 9999999999999999999999999999999999976666668999999999999875 5899999999998764321 1
Q ss_pred HHhhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHH
Q 000351 825 DLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKV 904 (1623)
Q Consensus 825 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~ 904 (1623)
++. ...+
T Consensus 232 ~~~----------------------------------------------------------~~~l--------------- 238 (500)
T COG1129 232 ETS----------------------------------------------------------EDEL--------------- 238 (500)
T ss_pred CCC----------------------------------------------------------HHHH---------------
Confidence 100 0000
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 905 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLY 984 (1623)
Q Consensus 905 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~ 984 (1623)
.+.+
T Consensus 239 ----v~~M------------------------------------------------------------------------ 242 (500)
T COG1129 239 ----VRLM------------------------------------------------------------------------ 242 (500)
T ss_pred ----HHHh------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHH
Q 000351 985 AAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLL 1064 (1623)
Q Consensus 985 ~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1064 (1623)
.|+
T Consensus 243 -------------------------vGr---------------------------------------------------- 245 (500)
T COG1129 243 -------------------------VGR---------------------------------------------------- 245 (500)
T ss_pred -------------------------hCc----------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1065 LLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL 1144 (1623)
Q Consensus 1065 ~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1144 (1623)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCcc
Q 000351 1145 EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIE-LPSEAPLV 1223 (1623)
Q Consensus 1145 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~-~~~e~~~~ 1223 (1623)
+..+ .|. +.
T Consensus 246 -------------------------------------------------------------------~~~~~~~~--~~- 255 (500)
T COG1129 246 -------------------------------------------------------------------ELEDLFPE--PP- 255 (500)
T ss_pred -------------------------------------------------------------------chhhhccc--cc-
Confidence 0000 000 00
Q ss_pred ccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEe
Q 000351 1224 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD 1303 (1623)
Q Consensus 1224 ~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~d 1303 (1623)
++ -+..-.++++|++.. ..++|+||++++||++||.|-=|||+|-++++|+|..++.+|+|.+||.+
T Consensus 256 -----~~--~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~ 322 (500)
T COG1129 256 -----EE--GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKP 322 (500)
T ss_pred -----cc--CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEE
Confidence 00 001123678887642 25899999999999999999999999999999999999999999999998
Q ss_pred cCCCChH-HhhhceEEEcCCCc---cc-cccHHhhcCCC--CCCCHH-HHHHHHHHhcHHHHHHhccC---CcchhhhcC
Q 000351 1304 IAKFGLM-DLRKILGIIPQSPV---LF-SGTVRFNLDPF--SEHSDA-DLWEALERAHLKDAIRRNSL---GLDAQVSEA 1372 (1623)
Q Consensus 1304 i~~i~~~-~lR~~i~~vpQdp~---Lf-~gTIr~NLd~~--~~~sd~-~i~~aL~~~~l~~~i~~lp~---gLdt~v~e~ 1372 (1623)
+.--++. ..+..|+|||-|-- +| ..+|++|+..- ..++.. -+...-++....++++++.- +.+..+
T Consensus 323 v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v--- 399 (500)
T COG1129 323 VRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI--- 399 (500)
T ss_pred ccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh---
Confidence 8777655 67778999999863 55 55999999632 111101 23344555556677776532 333444
Q ss_pred CCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCce
Q 000351 1373 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGR 1450 (1623)
Q Consensus 1373 G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1450 (1623)
.+||||++|+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+||-.+.++.. ||||+||.+|+
T Consensus 400 -~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gr 478 (500)
T COG1129 400 -GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGR 478 (500)
T ss_pred -hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCE
Confidence 4699999999999999999999999999999999999999999999876 57999999999999986 99999999999
Q ss_pred EeeecCh
Q 000351 1451 VLEYDTP 1457 (1623)
Q Consensus 1451 ive~Gtp 1457 (1623)
++..=+.
T Consensus 479 i~~e~~~ 485 (500)
T COG1129 479 IVGELDR 485 (500)
T ss_pred EEEEecc
Confidence 9875333
No 98
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8.9e-54 Score=554.11 Aligned_cols=510 Identities=15% Similarity=0.145 Sum_probs=391.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCC-c----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 917 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG-P----LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 991 (1623)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~-~----~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~ 991 (1623)
.+++.+++.++...+....+++.+...+........ - ..+..+++++.+...+..++...+......+..+++|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666667777777777777666543211111 1 11222333334444455555566666677778888888
Q ss_pred HHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHH-HHHHHHHHHHHHHHHHHHH
Q 000351 992 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGI-VSTMSLWAIMPLLLLFYAA 1070 (1623)
Q Consensus 992 ~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~i 1070 (1623)
+++++....++.|||. ++|++.+|+++|++.+...+...+..++..++.+++.++.+.. .+|.+.++++..+++.+.+
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888888888899987 7899999999999999999998888888888888877776665 6676666666666666677
Q ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000351 1071 YLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGG- 1149 (1623)
Q Consensus 1071 ~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~- 1149 (1623)
.+++.+..+++.+......+.+.+...|.++|+++|++|+.++...+++.+..++..+..........+.....+++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 7777777778888888888999999999999999999999999998888888888777777777777776666665543
Q ss_pred ---HHHHHHHHHHHHh-c----CCccchhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 000351 1150 ---LMIWLTATFAVVQ-N----GSAENQEAFASTMGLLLSY---ALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 1218 (1623)
Q Consensus 1150 ---~~~~~~~~~~v~~-~----~~~~~~~~~~~~~gl~l~~---~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~ 1218 (1623)
.+.++.+...+.. . +..+ ....++..+.+ ...+..++..+......+.....+.+|+.++.+.++
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t----~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMS----EEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222222121221 1 2333 12223333333 456678888899999999999999999999987433
Q ss_pred CCC-------cccc--CC----C-----C--CCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCC
Q 000351 1219 EAP-------LVIE--SN----R-----P--PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAG 1278 (1623)
Q Consensus 1219 e~~-------~~~~--~~----~-----~--~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSG 1278 (1623)
+.. ...+ .. . + .......+.|+++||+++|+++ +++|+|+||+|++||++||+||||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsG 490 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCG 490 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCC
Confidence 210 0000 00 0 0 0000134679999999999643 36999999999999999999999999
Q ss_pred hhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCC--------CCCCHHHHHHHHH
Q 000351 1279 KSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF--------SEHSDADLWEALE 1350 (1623)
Q Consensus 1279 KSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~--------~~~sd~~i~~aL~ 1350 (1623)
||||+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+++|+... .+.++++++++++
T Consensus 491 KSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~ 559 (659)
T TIGR00954 491 KSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILD 559 (659)
T ss_pred HHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHH
Confidence 99999999999999999999874 6789999999999999999999742 2357889999999
Q ss_pred HhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Q 000351 1351 RAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLII 1430 (1623)
Q Consensus 1351 ~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~I 1430 (1623)
.+++.+++++ |.|+|+..+. +.+||||||||++||||++++|++||||||||+||+++++.+++.+++ .++|+|+|
T Consensus 560 ~~~l~~~~~~-~~g~~~~~~~-~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~--~~~tvI~i 635 (659)
T TIGR00954 560 NVQLTHILER-EGGWSAVQDW-MDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE--FGITLFSV 635 (659)
T ss_pred HcCCHHHHhh-cCCccccccc-ccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH--cCCEEEEE
Confidence 9999999988 8999999874 678999999999999999999999999999999999999999999987 48999999
Q ss_pred ecCchhhhccCEEEEEe
Q 000351 1431 AHRLNTIIDCDRILLLD 1447 (1623)
Q Consensus 1431 aHrl~ti~~~DrI~Vl~ 1447 (1623)
|||++++..||+|++|+
T Consensus 636 sH~~~~~~~~d~il~l~ 652 (659)
T TIGR00954 636 SHRKSLWKYHEYLLYMD 652 (659)
T ss_pred eCchHHHHhCCEEEEEe
Confidence 99999999999999997
No 99
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5e-52 Score=544.83 Aligned_cols=487 Identities=20% Similarity=0.258 Sum_probs=376.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhh
Q 000351 965 FGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLS 1044 (1623)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~ 1044 (1623)
+...++.--..+.....+.+.-..+-..++++.++.+-..-...+.|+|+|-++.|.+.+++..... ..+...-+.++.
T Consensus 253 ~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~-h~~w~~Plqi~~ 331 (1381)
T KOG0054|consen 253 LLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFL-HLLWSAPLQIIL 331 (1381)
T ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3333333334455666777777777888888888888887778889999999999999999866543 333334444444
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHH
Q 000351 1045 TFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMD 1124 (1623)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d 1124 (1623)
++.++...-.+..++.+.++++++.++.+..+..+..+......+.......+|.++|+++||.|+||+.|.++..+.-+
T Consensus 332 ~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~ 411 (1381)
T KOG0054|consen 332 ALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQ 411 (1381)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHH
Confidence 44444444444455555667777777877777777777777778888888999999999999999999999988887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1125 KNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV-VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENS 1203 (1623)
Q Consensus 1125 ~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~ 1203 (1623)
.-.+........+.+..+.......++.+++.+..+ ...+..+ +..+=.++++.-.+..++..+......+-+.
T Consensus 412 ~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~~lt-----~~~aF~slalfniLr~pl~~~P~~i~~~vqa 486 (1381)
T KOG0054|consen 412 KELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGNLLT-----ASTAFTSLALFNILRFPLFMLPSVISQLVQA 486 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccc-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544444434333333332222222222222222 2233333 3233333444444455666677777777778
Q ss_pred HHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCC-CCCCcccceeeEeCCCCEEEEecCCCCChhhH
Q 000351 1204 LNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSM 1282 (1623)
Q Consensus 1204 ~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrsGSGKSTL 1282 (1623)
.+|++|+.++...++..+...+. .+.-+.+..|+++|.+|++.+ +.++.|+||||+|++||.+||||++|||||||
T Consensus 487 ~VS~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSL 563 (1381)
T KOG0054|consen 487 KVSLKRLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSL 563 (1381)
T ss_pred HHHHHHHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHH
Confidence 99999999999765543322221 111233446999999999976 34459999999999999999999999999999
Q ss_pred HHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhcc
Q 000351 1283 LNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNS 1362 (1623)
Q Consensus 1283 l~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp 1362 (1623)
+.+|+|.++..+|++.++|. ++||||.|.+|+|||||||.+..+++++.-.++++.|.|+.-++.+|
T Consensus 564 L~AiLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp 630 (1381)
T KOG0054|consen 564 LSAILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILP 630 (1381)
T ss_pred HHHHhcCcccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcC
Confidence 99999999999999999985 99999999999999999999988999999999999999999999999
Q ss_pred CCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHH-HHHHHHHcCCcEEEEeecCchhhhccC
Q 000351 1363 LGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALI-QKTIREEFKSCTMLIIAHRLNTIIDCD 1441 (1623)
Q Consensus 1363 ~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~I-q~~L~~~~~~~TvI~IaHrl~ti~~~D 1441 (1623)
.|=.|.+||+|.|||||||||++||||+.++++|.+||.|-|+||+.+-+.| ++.|+...+++|+|.|||.++.+.+||
T Consensus 631 ~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad 710 (1381)
T KOG0054|consen 631 FGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHAD 710 (1381)
T ss_pred CCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCC
Confidence 9999999999999999999999999999999999999999999999998876 556777778999999999999999999
Q ss_pred EEEEEeCceEeeecChhHHhhcCCChHHHHHHH
Q 000351 1442 RILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1442 rI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~ 1474 (1623)
+|+||++|+|++.|+++||++. ++.|.++..+
T Consensus 711 ~Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~~ 742 (1381)
T KOG0054|consen 711 QIIVLKDGKIVESGTYEELLKS-GGDFAELAHE 742 (1381)
T ss_pred EEEEecCCeEecccCHHHHHhc-chhHHHHhhc
Confidence 9999999999999999999954 5677777433
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=5.5e-51 Score=528.10 Aligned_cols=503 Identities=17% Similarity=0.160 Sum_probs=382.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 302 RFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVF 381 (1623)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i~ 381 (1623)
.++..+++.++.+++....|++++.+++.+.+.+..... ..++..++..++.+++.....+...++..++|..+...++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~-~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFA-WILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777888889999999999999999988754321110 0111122222233333333444455566666666666666
Q ss_pred HHHhcC----ChhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHH
Q 000351 382 RKSLRI----THEARKNFASGKITNLMTTDAEQLQQVCQ-ALHTLWSAPFRIIISLVLLYNELGV-ASLLGALLLVFMFP 455 (1623)
Q Consensus 382 ~K~l~l----~~~~~~~~~~g~i~nlms~Dv~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~-~~l~g~~~~~~~~~ 455 (1623)
++.++. +....++ .+|++.+++++|++.+.+.+. .+..+...++.++++++.++..++| .+++.++.+++.+.
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 666553 2222232 579999999999999998654 4566677777777788777776666 44555556667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 456 VQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPV 535 (1623)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~ 535 (1623)
+..++.+++.+..++..+..++-.+..+|.++|+++||.|+.|+...+++++.-++..+...+..........+...+..
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 78888999999999999999999999999999999999999999999998888777777766666666655555444322
Q ss_pred ----HHHHHHHHHHHHh-C----CCcCHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000351 536 ----LVTVVSFGMFTLL-G----GDLTPARAFT-S---LSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKIL 602 (1623)
Q Consensus 536 ----~~~~~~f~~~~~~-~----~~lt~~~~ft-~---l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~ 602 (1623)
.+..+..+...+. . +.+|.+..+. . ..++..+..|+..+...+..+.++.++.+||.++++.++...
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1222222222222 1 5688776544 2 334667789999999999999999999999999997543211
Q ss_pred C--------CC-----------------CCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChh
Q 000351 603 L--------PN-----------------PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKT 657 (1623)
Q Consensus 603 ~--------~~-----------------~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKS 657 (1623)
. +. .........|+++|++|.|++ ++++|+|+||+|++||+++|+||||||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGsGKS 492 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGCGKS 492 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCCCHH
Confidence 0 00 000112246999999999963 35799999999999999999999999999
Q ss_pred HHHHHHcCCccCCCCCeEEE--cCcEEEEccCcccCcccHHHHHhcCC--------CCCHHHHHHHHHHhCchhHHhcCC
Q 000351 658 SLISAMLGELPPVSDASAVI--RGTVAYVPQVSWIFNATVRDNILFGS--------AFEPARYEKAIDVTSLQHDLDLLP 727 (1623)
Q Consensus 658 TLl~~l~G~~~~~~g~~~~~--~~~iay~~Q~~~l~~~Tv~enI~~g~--------~~~~~~~~~~~~~~~l~~~~~~l~ 727 (1623)
||+++|+|+++|++| .+.. +.+++||||+|+++++|++|||.++. ..++++..++++.+++.+.++. |
T Consensus 493 TLl~lL~Gl~~~~~G-~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~ 570 (659)
T TIGR00954 493 SLFRILGELWPVYGG-RLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER-E 570 (659)
T ss_pred HHHHHHhCCCCCCCC-eEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-c
Confidence 999999999999988 4444 45799999999999999999999873 2456778889999999988877 8
Q ss_pred CCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcC
Q 000351 728 GGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVD 807 (1623)
Q Consensus 728 ~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d 807 (1623)
.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+.+.. .|+|+|+|||+++.++.||
T Consensus 571 ~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~---~~~tvI~isH~~~~~~~~d 646 (659)
T TIGR00954 571 GGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE---FGITLFSVSHRKSLWKYHE 646 (659)
T ss_pred CCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH---cCCEEEEEeCchHHHHhCC
Confidence 89899876 5779999999999999999999999999999999999999999876543 3899999999999999999
Q ss_pred EEEEEeC
Q 000351 808 RIILVHE 814 (1623)
Q Consensus 808 ~i~~l~~ 814 (1623)
+|++|++
T Consensus 647 ~il~l~~ 653 (659)
T TIGR00954 647 YLLYMDG 653 (659)
T ss_pred EEEEEeC
Confidence 9999974
No 101
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.4e-52 Score=487.47 Aligned_cols=440 Identities=25% Similarity=0.414 Sum_probs=342.0
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC-------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG------------- 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~------------- 679 (1623)
..++++++++.|+ +-.+++||||++++||+.+|+|.||+|||||+++|.|.++|++| .+.+.|
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~G-eI~v~G~~v~~~sP~dA~~ 78 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSG-EIRVDGKEVRIKSPRDAIR 78 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcc-eEEECCEEeccCCHHHHHH
Confidence 4699999999998 46799999999999999999999999999999999999999999 555443
Q ss_pred -cEEEEccCcccC-cccHHHHHhcCCCC------CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 680 -TVAYVPQVSWIF-NATVRDNILFGSAF------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 680 -~iay~~Q~~~l~-~~Tv~enI~~g~~~------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
.||+|.|++.|+ +.||.|||..|.+- +. ++..+..+..++.-|.+ +....||=|+||
T Consensus 79 ~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~qQ 147 (501)
T COG3845 79 LGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGEQQ 147 (501)
T ss_pred cCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcchhH
Confidence 499999999997 78999999998753 22 23344444555543332 334579999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHH
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 826 (1623)
||.|-+|||++|+++|||||||.|-|...+.+|+.+......|+|||+|||.+.++.. ||++-||.+|+++..- +..
T Consensus 148 RVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~--~~~ 225 (501)
T COG3845 148 RVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTV--DPV 225 (501)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeee--cCC
Confidence 9999999999999999999999999999999999777666679999999999998765 8999999999976321 100
Q ss_pred hhcChhHHHhHHhhcchhhhhcccccCcccccCCCCCCCCCCCCCCCcccccccccccchhhhhhHhhhhcccchHHHHH
Q 000351 827 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 906 (1623)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 906 (1623)
. +. . .++
T Consensus 226 ~-----------------------------------~~--------------------t-----~~e------------- 232 (501)
T COG3845 226 A-----------------------------------ET--------------------T-----EEE------------- 232 (501)
T ss_pred C-----------------------------------CC--------------------C-----HHH-------------
Confidence 0 00 0 000
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHhhhhchhhhhcccCccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 907 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 986 (1623)
Q Consensus 907 ~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s 986 (1623)
.
T Consensus 233 -----l-------------------------------------------------------------------------- 233 (501)
T COG3845 233 -----L-------------------------------------------------------------------------- 233 (501)
T ss_pred -----H--------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHHHHHH
Q 000351 987 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 1066 (1623)
Q Consensus 987 ~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1066 (1623)
T Consensus 234 -------------------------------------------------------------------------------- 233 (501)
T COG3845 234 -------------------------------------------------------------------------------- 233 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1067 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 1146 (1623)
Q Consensus 1067 ~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1146 (1623)
.++.
T Consensus 234 ---------------a~lM------------------------------------------------------------- 237 (501)
T COG3845 234 ---------------AELM------------------------------------------------------------- 237 (501)
T ss_pred ---------------HHHh-------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccC
Q 000351 1147 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 1226 (1623)
Q Consensus 1147 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~ 1226 (1623)
....+ ..+. .
T Consensus 238 ---------------vG~~v------------------------------------------------~~~~------~- 247 (501)
T COG3845 238 ---------------VGREV------------------------------------------------VLRV------V- 247 (501)
T ss_pred ---------------cCCcc------------------------------------------------cccc------c-
Confidence 00000 0000 0
Q ss_pred CCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEec-C
Q 000351 1227 NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDI-A 1305 (1623)
Q Consensus 1227 ~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di-~ 1305 (1623)
. ++.-|..-.++++|++..-+.+ -+.+++|||+|++||++||.|-.|-|-|-|+.+|.|+..|.+|+|.++|.|+ .
T Consensus 248 -~-~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~ 324 (501)
T COG3845 248 -K-PPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLG 324 (501)
T ss_pred -c-CCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccc
Confidence 0 0111223358999999876443 3689999999999999999999999999999999999999999999999997 6
Q ss_pred CCChHHhhhc-eEEEcCCCc----cccccHHhhcCCCCCC----------CHHHHHHHHHHhcHHHHHHhc---cCCcch
Q 000351 1306 KFGLMDLRKI-LGIIPQSPV----LFSGTVRFNLDPFSEH----------SDADLWEALERAHLKDAIRRN---SLGLDA 1367 (1623)
Q Consensus 1306 ~i~~~~lR~~-i~~vpQdp~----Lf~gTIr~NLd~~~~~----------sd~~i~~aL~~~~l~~~i~~l---p~gLdt 1367 (1623)
..++...|+. +++||.|.. ..+-|+.||+-+.... .-.++.+ ...+.++++ +.+.++
T Consensus 325 ~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~-----~a~~li~~fdVr~~~~~~ 399 (501)
T COG3845 325 RLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK-----FARELIEEFDVRAPSPDA 399 (501)
T ss_pred cCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH-----HHHHHHHHcCccCCCCCc
Confidence 7788887765 999999984 4566999998532111 1122222 223344443 234444
Q ss_pred hhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEE
Q 000351 1368 QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILL 1445 (1623)
Q Consensus 1368 ~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~V 1445 (1623)
++ .+||||++||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-+|+++.. ||||.|
T Consensus 400 ~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaV 475 (501)
T COG3845 400 PA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAV 475 (501)
T ss_pred ch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeee
Confidence 33 5799999999999999999999999999999999999999999998876 57899999999999987 999999
Q ss_pred EeCceEeeecChhH
Q 000351 1446 LDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1446 l~~G~ive~Gtp~e 1459 (1623)
|.+|+++....|++
T Consensus 476 i~~Gri~~~~~~~~ 489 (501)
T COG3845 476 IYEGRIVGIVPPEE 489 (501)
T ss_pred eeCCceeccccccc
Confidence 99999998887765
No 102
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-51 Score=466.48 Aligned_cols=461 Identities=23% Similarity=0.356 Sum_probs=363.1
Q ss_pred HHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000351 373 RSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQA-LHTLWSAPFRIIISLVLLYNELGVASLLGALLLV 451 (1623)
Q Consensus 373 r~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~-~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~~~ 451 (1623)
-..+.-..|.++++|+.....+..+|.+..-+..-.+-|+....+ +..+....+++++.++++++..||......++.+
T Consensus 14 ~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv 93 (497)
T COG5265 14 VRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTV 93 (497)
T ss_pred HHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHH
Confidence 335666778899999887777777777665555555556655543 4566777889999999999988886555444444
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 452 FM-FPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLAACNSFIL 530 (1623)
Q Consensus 452 ~~-~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~ 530 (1623)
++ ..+...+...-...+++..++-.+-.....+.|-+..++|.|+-|+.+..+..+..+...+...|...-..+.++..
T Consensus 94 ~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ 173 (497)
T COG5265 94 ILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQ 173 (497)
T ss_pred HHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 44 43333333333344445455555555666799999999999999999888877666654444333322222222211
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-CCC-C
Q 000351 531 NSI--PVLVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKIL-LPN-P 606 (1623)
Q Consensus 531 ~~~--~~~~~~~~f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~-~~~-~ 606 (1623)
..+ ..+....+.+...+..+.+|.+.....-++...+..|++.+...+..+.+++...++..+.+..+.... .++ +
T Consensus 174 ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~ 253 (497)
T COG5265 174 TAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAP 253 (497)
T ss_pred HHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCc
Confidence 111 111222333334445788999999999999999999999999999999999999999999887654322 222 1
Q ss_pred CCC-CCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------
Q 000351 607 PLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------- 678 (1623)
Q Consensus 607 ~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------- 678 (1623)
+.. .....+.++|++|.|.+ .+++|+++||++++|+.+++||++|+||||++++|.+.+++.+| .+.+.
T Consensus 254 ~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG-~I~id~qdir~v 330 (497)
T COG5265 254 PLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG-SITIDGQDIRDV 330 (497)
T ss_pred cccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc-eEEEcchhHHHh
Confidence 122 23356999999999986 58999999999999999999999999999999999999999999 54433
Q ss_pred ------CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 679 ------GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 679 ------~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
+.||.|||+..|||.|+..||.+|.+ ..+++..++.+++++.+.++.+|+|++|.|||+|-.||||+|||||+
T Consensus 331 tq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvai 410 (497)
T COG5265 331 TQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAI 410 (497)
T ss_pred HHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHH
Confidence 35999999999999999999999976 46788889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcCh
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGE 831 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 831 (1623)
||+++++|+|++|||.||+||.+|++.|-.. ++...+|+|.++|.|+++.+-.||.|+||++|+|+|.|+|++|+..++
T Consensus 411 ar~ilk~p~il~~deatsaldt~te~~iq~~-l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~~g 489 (497)
T COG5265 411 ARTILKNPPILILDEATSALDTHTEQAIQAA-LREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAAGG 489 (497)
T ss_pred HHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHcCC
Confidence 9999999999999999999999999999765 455668999999999999999999999999999999999999999999
Q ss_pred hHHHhH
Q 000351 832 LFQKLM 837 (1623)
Q Consensus 832 ~~~~~~ 837 (1623)
.|++++
T Consensus 490 ~ya~mw 495 (497)
T COG5265 490 LYAEMW 495 (497)
T ss_pred hHHHHh
Confidence 998876
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.7e-52 Score=482.82 Aligned_cols=242 Identities=35% Similarity=0.680 Sum_probs=229.8
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||.++.+++...+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5699999999997555579999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcE
Q 000351 1317 GIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1396 (1623)
Q Consensus 1317 ~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~I 1396 (1623)
+||||+|.+|++|+++|++++...++++++++++.+++.+++.++|.++|+.++++|.+||||||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998877889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHHHhh
Q 000351 1397 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1397 LlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~~~~ 1476 (1623)
|||||||++||+.+++.+++.|++.++++|||+||||++++..||||+||++|+++++|+|++|+++ .+.|++++..++
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999985 478999998876
Q ss_pred hhhH
Q 000351 1477 AANA 1480 (1623)
Q Consensus 1477 ~~~~ 1480 (1623)
....
T Consensus 239 ~~~~ 242 (275)
T cd03289 239 RLKL 242 (275)
T ss_pred hHHH
Confidence 5443
No 104
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-48 Score=456.99 Aligned_cols=196 Identities=22% Similarity=0.332 Sum_probs=160.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|.++||+|+|.++. .++++++|.|.++++|++|||||+|||||++++.|.+.|+.|.|.-.-.. +++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cch
Confidence 499999999998764 79999999999999999999999999999999999999999998654322 233
Q ss_pred EEcCCC---ccccccHHhhcCC-CC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1318 IIPQSP---VLFSGTVRFNLDP-FS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1318 ~vpQdp---~Lf~gTIr~NLd~-~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
+.-|.- ..++.|.-+++.+ |. .-..+++...|.++||..-.+..| + .+||+|||.|+++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p------~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVP------M----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccc------h----hhcccccchhHHHHHHHhc
Confidence 333432 3345566666543 44 345677888899988864333322 2 4799999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeee-cCh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-DTP 1457 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~-Gtp 1457 (1623)
+|.||||||||++||.+|-..+.++|.+ ...+||+|+|+...|.+ +++|++.++|.+... |..
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe--~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINE--FPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhc--cCCceeeeechhhHHHHHHHHhHhhccCceeecCccH
Confidence 9999999999999999999999999987 46789999999999988 999999999998765 443
No 105
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-48 Score=458.91 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=215.8
Q ss_pred HHHHHHHHHHhhcCCCCCCcccc------C---CCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEec
Q 000351 1203 SLNAVERVGNYIELPSEAPLVIE------S---NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVG 1273 (1623)
Q Consensus 1203 ~~~aveRi~~~~~~~~e~~~~~~------~---~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvG 1273 (1623)
.+.+++|...|...+.|.....+ . ...+..||..+.|+|+|++++|+++.+++|+|+||+|++||++||+|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG 115 (329)
T PRK14257 36 KLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIG 115 (329)
T ss_pred ccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEEC
Confidence 45566666666665444321111 0 11134699999999999999997544579999999999999999999
Q ss_pred CCCCChhhHHHHhhcccc-----CCCcEEEECCEecC--CCChHHhhhceEEEcCCCccccccHHhhcCC---CCCCCHH
Q 000351 1274 RTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIA--KFGLMDLRKILGIIPQSPVLFSGTVRFNLDP---FSEHSDA 1343 (1623)
Q Consensus 1274 rsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~--~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~---~~~~sd~ 1343 (1623)
|||||||||+++|+|+++ |++|+|.|||+|+. +++...+|++++||||+|.+|++|+++||++ +...+++
T Consensus 116 ~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~ 195 (329)
T PRK14257 116 PSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDR 195 (329)
T ss_pred CCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChH
Confidence 999999999999999997 57999999999997 4566788999999999999999999999983 2234555
Q ss_pred HH-----HHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHH
Q 000351 1344 DL-----WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTI 1418 (1623)
Q Consensus 1344 ~i-----~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L 1418 (1623)
+. .++++.++++ .++++.+++.|.+||||||||+|||||++++|+||||||||++||+++.+.+++.|
T Consensus 196 ~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i 268 (329)
T PRK14257 196 KILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELI 268 (329)
T ss_pred HHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 54 4445555543 35678889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1419 REEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1419 ~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
++.++++|+|+|||+++++.+ ||||+||++|+|+|.|+|+++..++.
T Consensus 269 ~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~ 316 (329)
T PRK14257 269 LELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPK 316 (329)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCC
Confidence 999889999999999999988 99999999999999999999987654
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-47 Score=401.64 Aligned_cols=215 Identities=29% Similarity=0.480 Sum_probs=192.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecC-CCChHHhhhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA-KFGLMDLRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~-~i~~~~lR~~i 1316 (1623)
.|+++||+++|++. .||+|||++|++||++.||||||||||||+++|.|+-+|++|+|.|||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 38999999999754 7999999999999999999999999999999999999999999999998774 33788899999
Q ss_pred EEEcCCCccccc-cHHhhcCCCC----CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFS----EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~----~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
|+|+|...||+. |+-+|+.... ..+ ++.-.+.|+++||.+.....| ..||||||||+|||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHHH
Confidence 999999999987 9999996321 222 233455678888888777776 47999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
|||.-+|+|+++|||||+|||+.-..+.+.+++.. .|.|+|+|||.+....+ +|||+.||+|+|+|.|+|+++..++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999999976 47899999999999988 99999999999999999999998764
No 107
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-45 Score=427.80 Aligned_cols=195 Identities=19% Similarity=0.312 Sum_probs=162.9
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
..+++.+|+|.|.|+.++.++++++++..-+++++||+||+||||+++++.+-.+|..|.+-+. -|.+|
T Consensus 361 p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~-----------~r~ri 429 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRH-----------PRLRI 429 (582)
T ss_pred CeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeec-----------cccee
Confidence 4599999999999886679999999999999999999999999999999999999999998776 36789
Q ss_pred EEEcCCCccc-cccHHh--hc-CCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1317 GIIPQSPVLF-SGTVRF--NL-DPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1317 ~~vpQdp~Lf-~gTIr~--NL-d~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
+|-.|.-+=| +-++-. -+ .-+...+++|+.+.|...|+..-+... .-..||||||-||++|-....
T Consensus 430 ~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~----------si~~LSGGQKsrvafA~~~~~ 499 (582)
T KOG0062|consen 430 KYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQ----------SIASLSGGQKSRVAFAACTWN 499 (582)
T ss_pred cchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhc----------cccccCCcchhHHHHHHHhcC
Confidence 9999987633 222211 01 123344899999998886654433221 125699999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeee
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1454 (1623)
+|.+|||||||++||.++-..+-++|+.. +.-||+|||+.+.+.. |+.++|.++|+|.-+
T Consensus 500 ~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 500 NPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred CCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 99999999999999999999999999873 4469999999999988 999999999999874
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-46 Score=411.41 Aligned_cols=217 Identities=31% Similarity=0.475 Sum_probs=191.7
Q ss_pred EEEEEEEEEeCCC---CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH---Hh
Q 000351 1239 IKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DL 1312 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~---~l 1312 (1623)
|+++||++.|+.. ...+|+||||+|++||+.||+|+||||||||++++.++-+|++|+|.+||.|+..++.. .+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999752 24699999999999999999999999999999999999999999999999998877655 45
Q ss_pred hhceEEEcCCCcccc-ccHHhhcCC-CC--CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1313 RKILGIIPQSPVLFS-GTVRFNLDP-FS--EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~-gTIr~NLd~-~~--~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
|++||+|+|++.|++ .||.+|+.+ .. ..+. +++.+.|+.+||.|...+.| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 778999999999997 599999973 21 2333 34666777777777666655 58999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+|||||..+|+||+.|||||+|||+|-+.|.+.|++..+ |-||++|||-|+.+++ ||||.||++|+|+|.|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999998653 7899999999999998 9999999999999999999998
Q ss_pred hcCCC
Q 000351 1462 SNEGS 1466 (1623)
Q Consensus 1462 ~~~~~ 1466 (1623)
.++..
T Consensus 231 ~~Pk~ 235 (339)
T COG1135 231 ANPKH 235 (339)
T ss_pred cCcch
Confidence 87743
No 109
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.1e-44 Score=414.17 Aligned_cols=239 Identities=50% Similarity=0.819 Sum_probs=221.8
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
..|.|+++|++++|+....++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 35789999999999753346999999999999999999999999999999999999999999999999999988889999
Q ss_pred ceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
+++|+||+|.+|++|+++|+++.....+++++++++..++.+++..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999875444567788999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHHH
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||||++|++|++++.|+++++.+..++.|+.++.
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~ 254 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVR 254 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHh
Confidence 9999999999999999999999999877789999999999999899999999999999999999998877777777654
No 110
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-45 Score=392.30 Aligned_cols=219 Identities=32% Similarity=0.524 Sum_probs=196.4
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+|+|||++|.+. .+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~~--~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGNK--KAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCCc--eeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 7999999999743 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHH--HHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLK--DAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~--~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|=|..-||+. ||.+|+..-. ..+ ++++.|.++.++|. +|..+.| ..|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHHH
Confidence 9999999976 9999996322 223 34466677777774 4666665 579999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
||..+|+||++|||.++||+-|...+|+-+.+..+ ++|+|+|||++++... +|||+||++|+|+.+|+|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999999887654 7999999999999766 99999999999999999999999887
Q ss_pred ChHHH
Q 000351 1466 SSFSK 1470 (1623)
Q Consensus 1466 ~~f~~ 1470 (1623)
..|-+
T Consensus 229 n~FV~ 233 (309)
T COG1125 229 NDFVE 233 (309)
T ss_pred HHHHH
Confidence 66654
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-45 Score=382.37 Aligned_cols=219 Identities=26% Similarity=0.448 Sum_probs=198.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCC-----cEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER-----GRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~-----G~I~IdG~di~~--i~~~ 1310 (1623)
.++++|+++-|+.. .+|+|||++|++++++|++|||||||||++++|.|+.+..+ |+|.+||.||-+ ++.-
T Consensus 7 ~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 7 AIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred eeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 58999999999754 79999999999999999999999999999999999999875 999999999976 4788
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC-------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS-------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~-------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
.+|+++|+|+|.|.-|+.||+||+.... ..-|+-+.++|+++.||+-+... +.+.+..|||||+||
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDr-------L~~sa~~LSGGQQQR 157 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDR-------LHKSALGLSGGQQQR 157 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHH-------hhCCccCCChhHHHH
Confidence 9999999999999999999999997431 12245688899999999988653 445677899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||||.-+|+||+||||||+|||.+-..|++.|.+..++-|||+|||.|.-..+ +|+...+-.|+++|+|..+++-.
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~ 237 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFT 237 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhc
Confidence 99999999999999999999999999999999999999889999999999999877 99999999999999999999987
Q ss_pred cCC
Q 000351 1463 NEG 1465 (1623)
Q Consensus 1463 ~~~ 1465 (1623)
++.
T Consensus 238 ~P~ 240 (253)
T COG1117 238 NPK 240 (253)
T ss_pred Ccc
Confidence 653
No 112
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.9e-43 Score=403.62 Aligned_cols=233 Identities=36% Similarity=0.599 Sum_probs=213.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999996533579999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1397 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~IL 1397 (1623)
+||++.+|+.|+++||.... ..+.+++.++++..++.++++.+|.|+++..+..+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999998543 24556777888888999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHHH
Q 000351 1398 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 1472 (1623)
Q Consensus 1398 lLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l~ 1472 (1623)
||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|..++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 234 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLY 234 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHH
Confidence 999999999999999999999998778999999999999988999999999999999999999876 45565544
No 113
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.6e-43 Score=398.52 Aligned_cols=221 Identities=69% Similarity=1.076 Sum_probs=208.8
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
|.|+++|++++|+....++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999975434799999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcE
Q 000351 1317 GIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1396 (1623)
Q Consensus 1317 ~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~I 1396 (1623)
+|+||+|.+|++|+++|++++...+++++.++++..++.+++.++|.|+++.+++.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999997766778889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecCh
Q 000351 1397 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1397 LlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999988778999999999999989999999999999998864
No 114
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-43 Score=417.09 Aligned_cols=265 Identities=20% Similarity=0.285 Sum_probs=217.0
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCCCCCcEEEEeeEEEcCCCC
Q 000351 549 GGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKA 628 (1623)
Q Consensus 549 ~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~ 628 (1623)
.+.+++..+|+++++|+.+..|+..++..... ..|+..|+..++......+...+....|+++|++++|++ .
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~-~ 93 (329)
T PRK14257 22 LNELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMN-R 93 (329)
T ss_pred cchhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccCCCCcCceEEEEeeEEEecC-C
Confidence 35789999999999999999998877765433 568999987655321100111233457999999999974 2
Q ss_pred CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc-----CCCCCeE--------------EEcCcEEEEccCcc
Q 000351 629 ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASA--------------VIRGTVAYVPQVSW 689 (1623)
Q Consensus 629 ~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~-----~~~g~~~--------------~~~~~iay~~Q~~~ 689 (1623)
.+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|... ..++.++||||+||
T Consensus 94 ~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~ 173 (329)
T PRK14257 94 TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPT 173 (329)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCc
Confidence 4679999999999999999999999999999999999986 4577321 12457999999999
Q ss_pred cCcccHHHHHhcCCC---CC-HH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000351 690 IFNATVRDNILFGSA---FE-PA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 761 (1623)
Q Consensus 690 l~~~Tv~enI~~g~~---~~-~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~i 761 (1623)
+|++||+|||.|+.. ++ ++ .+..+++.|++.++++ +.++++|.+|||||||||+||||++++|+|
T Consensus 174 ~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqkqRl~LARAl~~~p~I 246 (329)
T PRK14257 174 PFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQQRLCIARAIALEPEV 246 (329)
T ss_pred cCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHHHHHHHHHHHHhCCCE
Confidence 999999999998642 22 22 2567788888765543 568899999999999999999999999999
Q ss_pred EEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000351 762 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 762 llLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
+||||||+|||+++.+++.+ ++....+++|+|+|||+++++.. ||+|++|++|+|++.|+++++...
T Consensus 247 lLLDEPts~LD~~~~~~i~~-~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 247 LLMDEPTSALDPIATAKIEE-LILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999765 55666678999999999999876 999999999999999999998754
No 115
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-43 Score=370.16 Aligned_cols=202 Identities=31% Similarity=0.488 Sum_probs=178.1
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------C
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------G 679 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------~ 679 (1623)
.|+++|++++|+. ..+|+|||++|++||+++|+|||||||||||++|.|+.+|++| .+.+. .
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G-~I~i~g~~~~~~~~~~~~R~ 77 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSG-SITVDGEDVGDKKDILKLRR 77 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCc-eEEECCEeccchhhHHHHHH
Confidence 5899999999973 5799999999999999999999999999999999999999999 44443 3
Q ss_pred cEEEEccCcccC-cccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~~l~-~~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
++|+|+|+..|| ..||.|||..+. ..+. ++..+.++..+|.+-.+..|. .||||||||||
T Consensus 78 ~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVA 146 (240)
T COG1126 78 KVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVA 146 (240)
T ss_pred hcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHH
Confidence 589999999998 789999999862 1222 334556788899888888885 89999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|||||.-+|+++|+|||||||||+....+.+-+......|.|.|+|||.+.|... ||||+.|++|+|+++|+++++..+
T Consensus 147 IARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 147 IARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999988666666679999999999999986 699999999999999999999865
Q ss_pred C
Q 000351 830 G 830 (1623)
Q Consensus 830 ~ 830 (1623)
.
T Consensus 227 p 227 (240)
T COG1126 227 P 227 (240)
T ss_pred C
Confidence 4
No 116
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.3e-43 Score=390.72 Aligned_cols=213 Identities=35% Similarity=0.557 Sum_probs=189.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.++++|++++|++. ++|+|+||+|++||.++|+||||||||||+++|.|++.|.+|+|.+||.|+.+++.+++-++++
T Consensus 2 ~L~~~~ls~~y~~~--~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGGK--PILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECCe--eEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 37899999999743 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcc-ccccHHhhcC----C----CCCCC--H-HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1318 IIPQSPVL-FSGTVRFNLD----P----FSEHS--D-ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1318 ~vpQdp~L-f~gTIr~NLd----~----~~~~s--d-~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
||||++.. |.-||+|-+. | +...+ | +.+.+||+.+++.++..+. -..||||||||+.
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHHH
Confidence 99999754 4559988553 2 22222 3 3477889999988876653 3469999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||.++|+||+||||||+||....-.+++.+++.. ++.|+|+|.|+++.... ||++++|++|+++..|+|+|.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 36999999999998765 99999999999999999999885
Q ss_pred c
Q 000351 1463 N 1463 (1623)
Q Consensus 1463 ~ 1463 (1623)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 3
No 117
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-42 Score=391.37 Aligned_cols=226 Identities=43% Similarity=0.709 Sum_probs=209.6
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
|.|+++|++++|+.. +++++|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 468999999999632 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1317 GIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1317 ~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
+|+||++.+|++|+++|+..+. ...++++.++++..++.++++++|.|+++.++....+||||||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999998653 345677888899999999999999999999999899999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
+|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999988678999999999999988999999999999999999888754
No 118
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-42 Score=391.85 Aligned_cols=226 Identities=38% Similarity=0.643 Sum_probs=208.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+....++++|+||++++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996543369999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1397 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~IL 1397 (1623)
+||++.+|+.|+++|+..+. ..+.+++.+.++..++.++++.+|.|+++.++....+||||||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999998643 33556677788888999999999999999998888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcC
Q 000351 1398 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1398 lLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++..+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG 227 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC
Confidence 9999999999999999999999987889999999999999889999999999999999999987653
No 119
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-41 Score=430.57 Aligned_cols=199 Identities=28% Similarity=0.382 Sum_probs=167.6
Q ss_pred CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc--CCCcEEEECCEecCCCChHHhhhceEEEcCCCccc-c
Q 000351 1251 ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--LERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF-S 1327 (1623)
Q Consensus 1251 ~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~--p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf-~ 1327 (1623)
+....|+|||=-++||.-+|++|.||||||||++.|.|-.. ..+|+|+|||.+..+ +..++++|||.|++.-. .
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44579999999999999999999999999999999998653 247999999999765 78999999999998644 4
Q ss_pred ccHHhhcCC------CCCCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC-cE
Q 000351 1328 GTVRFNLDP------FSEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS-KI 1396 (1623)
Q Consensus 1328 gTIr~NLd~------~~~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p-~I 1396 (1623)
-||||-|.+ -.+.+++| +.++++..+|.++- |..||..|..||..||.||.||=-|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 499998852 12334433 55666666665543 45688888999999999999999999999 89
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhh--hccCEEEEEe-CceEeeecChhH
Q 000351 1397 LVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTI--IDCDRILLLD-SGRVLEYDTPEE 1459 (1623)
Q Consensus 1397 LlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti--~~~DrI~Vl~-~G~ive~Gtp~e 1459 (1623)
|.|||||||||+++...|.+.+|+.. .|+||++.=|..+.. +.+|+++.|+ .|+.|-+|++.+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999876 689999999998863 5699999998 689999998754
No 120
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.6e-42 Score=382.74 Aligned_cols=207 Identities=61% Similarity=0.992 Sum_probs=187.8
Q ss_pred CCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh
Q 000351 1233 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1233 wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1312 (1623)
||..+.|+++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 88899999999999997533469999999999999999999999999999999999999999999999999988888888
Q ss_pred hhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1313 RKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|++++|+||+|.+|++|+++|+..+...+++++.++++ +++....||||||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998665555555544443 234567899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecCh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp 1457 (1623)
+|+||||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999998778999999999999988999999999999998875
No 121
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-42 Score=369.88 Aligned_cols=217 Identities=30% Similarity=0.512 Sum_probs=190.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---hhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR~ 1314 (1623)
.|++++|+++|+.. .|++||||+|++||.+||+|+||||||||++++.|++.|++|+|.|+|.|+.+++.++ +|+
T Consensus 8 ~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 8 LIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred eEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 59999999999754 7999999999999999999999999999999999999999999999999999988754 589
Q ss_pred ceEEEcCCCccccc-cHHhhcCC-CC---CCCHHHHHH----HHHHhcHHHH-HHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDP-FS---EHSDADLWE----ALERAHLKDA-IRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~-~~---~~sd~~i~~----aL~~~~l~~~-i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
++|+++|.-.||+. ||+||+.+ .. ..+++++.+ -|+.+||..- .+.+ .+.||||.|.|+
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----------PsELSGGM~KRv 154 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLY-----------PSELSGGMRKRV 154 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----------chhhcchHHHHH
Confidence 99999999999977 99999973 33 334554443 3555666544 2333 357999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+|||||.-+|+||++|||||+|||-+...+-+.|++..+ +.|+++|||+++++.. ||||+++.+|+|+..|+++|+.
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999988754 7899999999999987 8999999999999999999999
Q ss_pred hcCCCh
Q 000351 1462 SNEGSS 1467 (1623)
Q Consensus 1462 ~~~~~~ 1467 (1623)
+..+-.
T Consensus 235 ~sd~P~ 240 (263)
T COG1127 235 ASDDPW 240 (263)
T ss_pred hCCCHH
Confidence 865533
No 122
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.9e-42 Score=409.49 Aligned_cols=220 Identities=27% Similarity=0.429 Sum_probs=189.9
Q ss_pred EEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---hh
Q 000351 1239 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR 1313 (1623)
|+++||+++|+.+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ .|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7999999999632 236999999999999999999999999999999999999999999999999999887655 47
Q ss_pred hceEEEcCCCcccc-ccHHhhcCCC---CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1314 KILGIIPQSPVLFS-GTVRFNLDPF---SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~-gTIr~NLd~~---~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
++|+||||++.+|. .|+++|+... ...+. +++.++++.+++.+...+ ....||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~-----------~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDS-----------YPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 78999999999996 6999999631 11222 345667777776655443 33579999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+.+|+|||||||||+||+++.+.|.+.|++..+ +.|||+|||+++.+.. ||||++|++|+|+|.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998754 7899999999999977 99999999999999999999987
Q ss_pred cCCChHH
Q 000351 1463 NEGSSFS 1469 (1623)
Q Consensus 1463 ~~~~~f~ 1469 (1623)
++...+.
T Consensus 231 ~p~~~~~ 237 (343)
T TIGR02314 231 HPKTPLA 237 (343)
T ss_pred CCCcHHH
Confidence 6554443
No 123
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-41 Score=388.15 Aligned_cols=231 Identities=43% Similarity=0.719 Sum_probs=210.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 369999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1397 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~IL 1397 (1623)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+|.|+++.+.....+||||||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997532 34667788889999999999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhcCCChHHHH
Q 000351 1398 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 1471 (1623)
Q Consensus 1398 lLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l 1471 (1623)
||||||++||+++.+.+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++..+ .+.|..+
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~ 232 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEM 232 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHH
Confidence 999999999999999999999987668899999999999988999999999999999999998764 3444433
No 124
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-42 Score=370.43 Aligned_cols=221 Identities=31% Similarity=0.474 Sum_probs=187.2
Q ss_pred cEEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC-hHHhhh
Q 000351 1238 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDLRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~-~~~lR~ 1314 (1623)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.++.... ....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 389999999997541 24999999999999999999999999999999999999999999999997766543 335677
Q ss_pred ceEEEcCCCc--ccc-ccHHhhcC-CCCC----CCHHHHHHHHHHhcHHH-HHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1315 ILGIIPQSPV--LFS-GTVRFNLD-PFSE----HSDADLWEALERAHLKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1315 ~i~~vpQdp~--Lf~-gTIr~NLd-~~~~----~sd~~i~~aL~~~~l~~-~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
.+.+|+|||. |=+ -||++-|. |... ....+++++|+.+|+.+ +..+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 8999999996 222 37777663 3332 23456899999999864 555555 469999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCC--cEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKS--CTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~--~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||.-+|++||||||||+||+-..+.|++.+.+..++ -|.|+|||++..+.. ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999999999987765 499999999999998 99999999999999999999987
Q ss_pred cCCChHH
Q 000351 1463 NEGSSFS 1469 (1623)
Q Consensus 1463 ~~~~~f~ 1469 (1623)
.....|.
T Consensus 232 ~~~h~yt 238 (252)
T COG1124 232 HPSHPYT 238 (252)
T ss_pred CCccHHH
Confidence 6444443
No 125
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-42 Score=397.70 Aligned_cols=217 Identities=26% Similarity=0.417 Sum_probs=196.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|++.. +|+|+||+|+.||.++|+||||||||||+++|.|+.+|++|+|.|||.|++++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 489999999997542 999999999999999999999999999999999999999999999999999999865 7899
Q ss_pred EEcCCCccccc-cHHhhcCCCCC-------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~-------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
+|+|+..||+. ||++||.+.-. .-++++.++++..++.+.+++.| ..||||||||+|||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHH
Confidence 99999999977 99999974321 23566888888888888888776 4799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|+++|++++||||.|+||++....+...|++..+ +.|+|.|||+-.+++. +|||+||++|+|.+.|+|.|+..++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999999999988654 5899999999999887 999999999999999999999988876
Q ss_pred hHH
Q 000351 1467 SFS 1469 (1623)
Q Consensus 1467 ~f~ 1469 (1623)
.|-
T Consensus 228 ~fV 230 (338)
T COG3839 228 LFV 230 (338)
T ss_pred hhh
Confidence 654
No 126
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-42 Score=380.91 Aligned_cols=209 Identities=29% Similarity=0.461 Sum_probs=184.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+.+ +||+||||+|++||.+||+||||||||||+++++|++.|++|+|.+.|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 49999999999755 59999999999999999999999999999999999999999999999998866432 57899
Q ss_pred EEcCCC---ccccccHHhhcCCC-----------CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1318 IIPQSP---VLFSGTVRFNLDPF-----------SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1318 ~vpQdp---~Lf~gTIr~NLd~~-----------~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
||||.. .-|+-||+|-+... +..+.+++.+||+++++.++..+. + ..|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~-------i----~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQ-------I----GELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCc-------c----cccCcHHHHH
Confidence 999965 35788999976432 122357899999999999876542 3 3599999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+.|||||+++|++|+|||||+++|+.++..|.+.|++..+ |||||+|+|+++.+.+ ||+|+.|.+ ++...|+|++..
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhcc
Confidence 9999999999999999999999999999999999999874 8999999999999987 999999975 899999999988
Q ss_pred hc
Q 000351 1462 SN 1463 (1623)
Q Consensus 1462 ~~ 1463 (1623)
..
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 54
No 127
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.7e-41 Score=381.84 Aligned_cols=219 Identities=37% Similarity=0.600 Sum_probs=200.4
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
|.|+++|++++|+....++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 45899999999964324699999999999999999999999999999999999999999999999999888877788899
Q ss_pred EEEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1317 GIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1317 ~~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
+|+||++.+|..|+++|+.... ..+++++.+.++..++.+.+.+.|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999899999997542 235567888899999999999999999999988888999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeec
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1455 (1623)
+|||||||++||+++.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988679999999999998765
No 128
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.9e-41 Score=386.24 Aligned_cols=225 Identities=41% Similarity=0.664 Sum_probs=206.1
Q ss_pred EEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1239 IKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
|+++|++++|++. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999642 236999999999999999999999999999999999999999999999999998888878888999
Q ss_pred EEcCCCccccccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcE
Q 000351 1318 IIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1396 (1623)
Q Consensus 1318 ~vpQdp~Lf~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~I 1396 (1623)
|+||+|.+|+.|+++|+.... ....+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999997542 3345667778888899999999999999999888899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1397 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1397 LlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999987678999999999999988999999999999999999988754
No 129
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=400.18 Aligned_cols=221 Identities=20% Similarity=0.373 Sum_probs=187.5
Q ss_pred CccEEEEEEEEEeCCC---CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC-----
Q 000351 1236 SGSIKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----- 1307 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i----- 1307 (1623)
...|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 3459999999999642 13699999999999999999999999999999999999999999999999998653
Q ss_pred -----------ChHHhhhceEEEcCCC--ccccccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcc-hhhh
Q 000351 1308 -----------GLMDLRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVS 1370 (1623)
Q Consensus 1308 -----------~~~~lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~ 1370 (1623)
+...+|++++||+|+| .+|+.|+++|+.+.. ..++++.. ++ ..++++.+ |++ ...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~---~~--~~~~l~~~--gL~~~~~~ 171 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAK---KL--AKFYLNKM--GLDDSYLE 171 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHH---HH--HHHHHHHc--CCChhHhc
Confidence 3567889999999998 689999999996431 12333321 22 23444443 664 4567
Q ss_pred cCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeC
Q 000351 1371 EAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDS 1448 (1623)
Q Consensus 1371 e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1448 (1623)
+.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++
T Consensus 172 ~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~ 251 (320)
T PRK13631 172 RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDK 251 (320)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 7788999999999999999999999999999999999999999999998764 57899999999998855 999999999
Q ss_pred ceEeeecChhHHhhc
Q 000351 1449 GRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1449 G~ive~Gtp~eLl~~ 1463 (1623)
|++++.|+|+++..+
T Consensus 252 G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 252 GKILKTGTPYEIFTD 266 (320)
T ss_pred CEEEEeCCHHHHhcC
Confidence 999999999999754
No 130
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=363.45 Aligned_cols=212 Identities=29% Similarity=0.437 Sum_probs=187.9
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC---hHHhhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~---~~~lR~ 1314 (1623)
.|+++||+.+|+.+ ..+|+||||+|++||.|+|+||||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 48999999999644 58999999999999999999999999999999999999999999999999999888 556788
Q ss_pred ceEEEcCCCccccc-cHHhhcCC------------CCCCCH---HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCCh
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDP------------FSEHSD---ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 1378 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~------------~~~~sd---~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSg 1378 (1623)
+||+|+|.+.|-+. |+-+|+.. |+-.+. ....++|+++++.+..-. +.++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCCc
Confidence 99999999998865 99999731 233333 346777888887665433 3468999
Q ss_pred hHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1379 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1379 GQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
||+||++|||||.++|+|++-|||+|+|||.+.+.+++.|++.. .|.|||+.-|.++...+ ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999875 47999999999999987 9999999999999999
Q ss_pred ChhHHh
Q 000351 1456 TPEELL 1461 (1623)
Q Consensus 1456 tp~eLl 1461 (1623)
+++||-
T Consensus 231 ~~~el~ 236 (258)
T COG3638 231 PASELT 236 (258)
T ss_pred Chhhhh
Confidence 999964
No 131
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-41 Score=385.87 Aligned_cols=212 Identities=30% Similarity=0.465 Sum_probs=182.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh---HHhhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~---~~lR~~ 1315 (1623)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999964 369999999999999999999999999999999999999999999999999987764 567889
Q ss_pred eEEEcCCCccccc-cHHhhcCCC----CCCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPF----SEHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1386 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~----~~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaL 1386 (1623)
++|+||++.+|.+ |+++|+... ...+.+ ++.++++..++.++ ......+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA-----------EDLYPAELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 9999999999986 999999642 112222 34445555544333 333445799999999999
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1387 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1387 ARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++...
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998653 7899999999999877 999999999999999999998753
No 132
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3e-41 Score=384.30 Aligned_cols=211 Identities=32% Similarity=0.509 Sum_probs=181.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccc-----cCCCcEEEECCEecCCCC--hHH
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV-----ELERGRILIDGFDIAKFG--LMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~-----~p~~G~I~IdG~di~~i~--~~~ 1311 (1623)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.++|.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999653 6999999999999999999999999999999999999 999999999999998776 567
Q ss_pred hhhceEEEcCCCccccccHHhhcCCCC---C-CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPFS---E-HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~-~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
+|++++|+||++.+|..|+++|+.... . .. ++++.++++..++.+...+.+. +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 788999999999999789999996421 1 11 2345556666555443332210 46899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
++|||||+++|++|||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987655899999999999876 999999999999999998764
No 133
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=378.47 Aligned_cols=215 Identities=29% Similarity=0.495 Sum_probs=194.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecC-CCChHHhhhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA-KFGLMDLRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~-~i~~~~lR~~i 1316 (1623)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 48999999999876 68999999999999999999999999999999999999999999999999998 47889999999
Q ss_pred EEEcCCC--ccccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp--~Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
|+|.|+| .+|..||.+.+.+.. ..+. +.+.++|+.+++.++.++.| .+||||||||+|||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999987543 2233 44777888888877755544 57999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
.+|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 999999999999999999999999999999999764 4799999999999988 9999999999999999999988653
No 134
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.7e-41 Score=350.87 Aligned_cols=207 Identities=28% Similarity=0.438 Sum_probs=187.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---hhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR~~ 1315 (1623)
|+|+||+++|+.+ +++|+||||+|++||.+-|+|||||||||++++|++...|+.|+|.++|.|++++..++ +|++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999876 68999999999999999999999999999999999999999999999999999887665 7999
Q ss_pred eEEEcCCCccccc-cHHhhcCC-CC------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDP-FS------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~-~~------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
||+|+||.-|... ||.||+.+ .. ..-.+++.++|+.+||.+-...+| ..|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHHH
Confidence 9999999988765 99999963 11 112456889999999999988887 47999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
||++.+|++||-||||-+||+++...|++.+.+.. .|.|||+.||+.+.+.+ --|++.+++|+++....+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999999875 58999999999999988 679999999999987654
No 135
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=381.13 Aligned_cols=220 Identities=28% Similarity=0.449 Sum_probs=188.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCccccccHHhhcCCCCC---CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1318 IIPQSPVLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1318 ~vpQdp~Lf~gTIr~NLd~~~~---~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
|+||+|.+|+.|+++|+..... ..++++.+.++..++.+ .........||||||||++||||++++|
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999974321 12234444454444321 2334456789999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++...+...|.
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 228 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVT 228 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHH
Confidence 9999999999999999999999999864 37899999999999876 999999999999999999999865443343
No 136
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.4e-40 Score=384.17 Aligned_cols=225 Identities=22% Similarity=0.365 Sum_probs=201.6
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.|+++|++++|+.+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++| .+.+. ..
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G-~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEG-DIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCc-EEEECCEEhhhCCHHHHhhh
Confidence 48999999999642 4579999999999999999999999999999999999997 677 44432 35
Q ss_pred EEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
|+||||+|++|++||++|+....+++++++.++++.+++.+.++.+|++++|.++++|.+||||||||++||||++++|+
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997444567788899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHhHHhh
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 840 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 840 (1623)
|+||||||++||+.+.+.+.+.+.. ..+++|+|+|||+++++..||+|++|++|++++.|+++++.++...++.++.+.
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 237 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPS 237 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhc
Confidence 9999999999999999988876553 446899999999999998899999999999999999999999888888887665
Q ss_pred cc
Q 000351 841 GK 842 (1623)
Q Consensus 841 ~~ 842 (1623)
+.
T Consensus 238 ~~ 239 (275)
T cd03289 238 DR 239 (275)
T ss_pred ch
Confidence 43
No 137
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=382.44 Aligned_cols=218 Identities=24% Similarity=0.416 Sum_probs=189.8
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc---CCCcEEEECCEecCCCChHHhhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~---p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.+.+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999964 369999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ceEEEcCCCccccccHHhhcCCCC---C------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPFS---E------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~~---~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
+++|+||+|.+|+.|+++|+.... . ..++++.++++.+++.+++.. ...+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHHH
Confidence 999999999999999999996431 1 112345566666666544332 234556789999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987778999999999999876 9999999999999999999987643
No 138
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-41 Score=391.60 Aligned_cols=218 Identities=28% Similarity=0.426 Sum_probs=196.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|++ ..+++|+||+|++||.+.++|||||||||++++|.|+..|++|+|.+||.|+..++++ ++.|+
T Consensus 5 ~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ig 80 (352)
T COG3842 5 ALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPIG 80 (352)
T ss_pred eEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcccc
Confidence 5999999999983 3799999999999999999999999999999999999999999999999999999885 67899
Q ss_pred EEcCCCccccc-cHHhhcCCCCC----CCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSE----HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~----~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+|+|+..||+. ||++|+.+.-. ..+ +.+.++|+.+++.++-.+.| ..|||||+||+||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHHH
Confidence 99999999976 99999974322 222 36888999999988877776 479999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
||..+|++|+||||-|+||.+-...++.-|++.. .|.|.|.|||+-++... +|||+||++|+|...|+|+|+..++.
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~ 229 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPA 229 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcc
Confidence 9999999999999999999999999999988765 37899999999998766 99999999999999999999998887
Q ss_pred ChHHH
Q 000351 1466 SSFSK 1470 (1623)
Q Consensus 1466 ~~f~~ 1470 (1623)
+.|-.
T Consensus 230 ~~fVA 234 (352)
T COG3842 230 TRFVA 234 (352)
T ss_pred hHHHH
Confidence 66643
No 139
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=398.51 Aligned_cols=217 Identities=22% Similarity=0.393 Sum_probs=189.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+++ .++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.++++. +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 38999999999422 3699999999999999999999999999999999999999999999999999987764 47899
Q ss_pred EEcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
||||++.+|+. ||++|+.+.. ..+ ++++.++++..++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 9999997421 122 234566777777766655543 5799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999998754 7899999999998876 999999999999999999999887654
Q ss_pred hH
Q 000351 1467 SF 1468 (1623)
Q Consensus 1467 ~f 1468 (1623)
.|
T Consensus 229 ~~ 230 (356)
T PRK11650 229 TF 230 (356)
T ss_pred HH
Confidence 44
No 140
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=398.36 Aligned_cols=217 Identities=25% Similarity=0.409 Sum_probs=189.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...++ .+++++
T Consensus 6 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~ig 81 (351)
T PRK11432 6 FVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDIC 81 (351)
T ss_pred EEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCEE
Confidence 5999999999964 369999999999999999999999999999999999999999999999999988765 357899
Q ss_pred EEcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
||+|++.+|+. |+++|+.+.. ..+ ++++.++++..++.++..+. ...||||||||++||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999976 9999997421 122 34556667776665544333 45799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++++.. ||||+||++|+|++.|+|+++.+++..
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~ 230 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPAS 230 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 9999999999999999999999999999998754 7899999999999876 999999999999999999999987765
Q ss_pred hHH
Q 000351 1467 SFS 1469 (1623)
Q Consensus 1467 ~f~ 1469 (1623)
.|.
T Consensus 231 ~~~ 233 (351)
T PRK11432 231 RFM 233 (351)
T ss_pred hHH
Confidence 443
No 141
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-40 Score=363.68 Aligned_cols=204 Identities=29% Similarity=0.417 Sum_probs=173.3
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---h-
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L- 1312 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---l- 1312 (1623)
++++||++.|..+. .++|+++||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 36999999999999999999999999999999999999999999999999999998544 3
Q ss_pred hhceEEEcCCCccccc-cHHhhcCC---CCCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1313 RKILGIIPQSPVLFSG-TVRFNLDP---FSEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~g-TIr~NLd~---~~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
|++||+|+|+..|++. |++||+.. +.... ++...+.++.+++.+.... .....||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~----------~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLK----------KKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhcc----------CCchhcCHHHHHHH
Confidence 4569999999999876 99999972 22222 2334445555565544331 23457999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeCceEe
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVL 1452 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~iv 1452 (1623)
||||||+.+|+|++.||||.+||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999875 378999999999999999999999999954
No 142
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.6e-40 Score=376.43 Aligned_cols=216 Identities=34% Similarity=0.549 Sum_probs=196.1
Q ss_pred CccEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhh
Q 000351 1236 SGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 1314 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~ 1314 (1623)
.|.|+++|++++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+....|+
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4679999999999642 236999999999999999999999999999999999999999999999999998887778888
Q ss_pred ceEEEcCCCccccccHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1315 ILGIIPQSPVLFSGTVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~gTIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+++|+||++.+|++|+++|++.. ......++.+..+..++.++++.+|.|+++.+.+...+||||||||++|||||+++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999843 22344556666677788899999988999989998999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceE
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1451 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1451 (1623)
|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999998777999999999999988999999999975
No 143
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=398.67 Aligned_cols=220 Identities=28% Similarity=0.460 Sum_probs=186.6
Q ss_pred EEEEEEEEEeCC--CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---hh
Q 000351 1239 IKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR 1313 (1623)
|+++||+++|+. ...++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999962 1246999999999999999999999999999999999999999999999999999887654 47
Q ss_pred hceEEEcCCCcccc-ccHHhhcCCC---CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1314 KILGIIPQSPVLFS-GTVRFNLDPF---SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~-gTIr~NLd~~---~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
++|+|+||++.+|. .|+++|+... ...++ +++.++++..++ +........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGL-----------SDKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHHHH
Confidence 88999999999986 5999999642 12222 233444444444 43344445689999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999887 99999999999999999999987
Q ss_pred cCCChHH
Q 000351 1463 NEGSSFS 1469 (1623)
Q Consensus 1463 ~~~~~f~ 1469 (1623)
++...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 6544343
No 144
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=388.04 Aligned_cols=215 Identities=29% Similarity=0.443 Sum_probs=187.9
Q ss_pred cEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1238 SIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
.|+++||+++|++. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999642 24699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCCc--cccccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSPV--LFSGTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp~--Lf~gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+|+||+|. ++..||++||.+.. ..+ ++.+.++++.+++.++.++. ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 99999983 56679999997421 122 23466677776666554443 357999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7899999999999977999999999999999999998754
No 145
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=364.06 Aligned_cols=197 Identities=26% Similarity=0.372 Sum_probs=174.8
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.+++++|+++|+. ..||+||||+|++||.|+|+||||||||||++++.|+..|++|+|.++|.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4899999999976 3799999999999999999999999999999999999999999999999988543 45799
Q ss_pred EEcCCCccccc-cHHhhcCCCCCC-------CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~~-------sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
||+|++.||+- ||++|+...-+. ..+.+.+.|+.+||.+|-++.| ..||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHH
Confidence 99999999998 999999632211 2345788889999988887776 4799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeC--ceEe
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS--GRVL 1452 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~--G~iv 1452 (1623)
|+.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||++++... +|||+||.+ |+|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999999998865 35999999999999776 999999998 5553
No 146
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2e-40 Score=397.83 Aligned_cols=217 Identities=24% Similarity=0.386 Sum_probs=187.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.++. +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEcCCCcccc-ccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFS-GTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~-gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
||||++.+|+ .||++|+.+.. ..+ ++++.++++..+ ++........+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~-----------L~~~~~~~~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVG-----------LPGSERKYPGQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CCchhhCChhhCCHHHHHHHHHHHH
Confidence 9999999996 59999997421 112 223444455544 4444445556899999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|+++|++|+||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++++.. ||||++|++|++++.|+|+++..++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999998754 7899999999999876 999999999999999999999987665
Q ss_pred hHH
Q 000351 1467 SFS 1469 (1623)
Q Consensus 1467 ~f~ 1469 (1623)
.|.
T Consensus 229 ~~~ 231 (353)
T TIGR03265 229 PFV 231 (353)
T ss_pred HHH
Confidence 553
No 147
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=380.86 Aligned_cols=220 Identities=25% Similarity=0.407 Sum_probs=189.0
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CC
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FG 1308 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~ 1308 (1623)
.+.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 456999999999964 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHhhhceEEEcCCCccccccHHhhcCCCC----CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhH
Q 000351 1309 LMDLRKILGIIPQSPVLFSGTVRFNLDPFS----EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1309 ~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~----~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQ 1380 (1623)
...+|++++|+||++.+|+.|+++|+.... ..+ ++++.++++.+++.+.+ ....++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHHH
Confidence 667889999999999999999999996421 122 23456666666653322 234455667899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
|||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988667899999999999876 99999999999999999999
Q ss_pred HhhcC
Q 000351 1460 LLSNE 1464 (1623)
Q Consensus 1460 Ll~~~ 1464 (1623)
+...+
T Consensus 242 ~~~~~ 246 (260)
T PRK10744 242 IFTKP 246 (260)
T ss_pred HHhCC
Confidence 87644
No 148
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-40 Score=339.15 Aligned_cols=210 Identities=29% Similarity=0.435 Sum_probs=187.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|.+++|.++|... + =.++++|++||++||+||||||||||++++.|+..|.+|+|.|+|+|....++ .++-+++
T Consensus 2 l~L~~V~~~y~~~-~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P--~~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL-P---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPP--AERPVSM 75 (231)
T ss_pred ccccceEEeeCcc-e---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCc--ccCChhh
Confidence 5788999999642 2 36789999999999999999999999999999999999999999999988777 4567999
Q ss_pred EcCCCccccc-cHHhhcCCC----CC---CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPF----SE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~----~~---~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
++||..||.. ||++|+... -. ...+.+..++.++|+.++.+++|. .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999987 999999632 22 234568899999999999999984 6999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
+|+-+||+||||.|+||+.-...|...+.+.. ++.|+++|||..+.+.. +||++++++|||...|+.+++++..+
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999999999988765 46899999999999877 99999999999999999999987543
No 149
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=385.60 Aligned_cols=212 Identities=27% Similarity=0.407 Sum_probs=185.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999633 36999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCCC--ccccccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSP--VLFSGTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp--~Lf~gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|+||+| .++..|+++|+.+.. ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 678889999997421 122 234566677777665544433 479999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
||+.+|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999999874 47899999999999865 9999999999999999997643
No 150
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=379.85 Aligned_cols=220 Identities=25% Similarity=0.406 Sum_probs=187.8
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 5999999999964 3699999999999999999999999999999999999997 48999999999863 3445
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC----CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS----EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~----~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
..|++++|+||++.+|+.|+++|+.+.. ..+ ++.+.++++.+++.+.+. ........+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCCHHHHH
Confidence 6788999999999999899999996421 111 344566677766643332 1233345689999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999999998
Q ss_pred hcCCC
Q 000351 1462 SNEGS 1466 (1623)
Q Consensus 1462 ~~~~~ 1466 (1623)
+++..
T Consensus 238 ~~~~~ 242 (254)
T PRK14273 238 FNPKN 242 (254)
T ss_pred hCCCC
Confidence 66543
No 151
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.1e-40 Score=374.25 Aligned_cols=210 Identities=27% Similarity=0.425 Sum_probs=179.9
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++||+++|+++..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 578999999965324699999999999999999999999999999999999999999999999998764 3567888999
Q ss_pred EcCCCccc-cccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLF-SGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf-~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+| ..|+++|+.... ..+. +++.++++..++.+. ......+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-----------ANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhChhhhCCHHHHHHHHHHHHH
Confidence 99999998 569999996321 1122 234455555554333 3333457999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999998777999999999999976 999999999999999999875
No 152
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=386.28 Aligned_cols=216 Identities=28% Similarity=0.469 Sum_probs=183.9
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC--hHHhh
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~--~~~lR 1313 (1623)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 89999999996432 36999999999999999999999999999999999999999999999999998753 45788
Q ss_pred hceEEEcCCC--ccccccHHhhcCCCC---CCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1314 KILGIIPQSP--VLFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1314 ~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
++++||||+| .+|+.|+++|+.+.. ..+++ ++.++++.+++. ..+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 578899999997421 22333 344455554442 01334455578999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 7899999999999865 9999999999999999999987
Q ss_pred hc
Q 000351 1462 SN 1463 (1623)
Q Consensus 1462 ~~ 1463 (1623)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 153
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-40 Score=379.84 Aligned_cols=218 Identities=24% Similarity=0.399 Sum_probs=187.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 4999999999964 369999999999999999999999999999999999975 589999999999875 3455
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC----CCC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF----SEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||++.+|+.|+++|+... +.. .++++.++++.+++.+.+. ...+....+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHHH
Confidence 678899999999999989999999632 111 1344666677766644332 2334556789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999976 9999999999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
+.+
T Consensus 237 ~~~ 239 (253)
T PRK14242 237 TRP 239 (253)
T ss_pred cCC
Confidence 643
No 154
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=8e-40 Score=377.32 Aligned_cols=219 Identities=29% Similarity=0.493 Sum_probs=186.7
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC-----CcEEEECCEecCCC--ChHH
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAKF--GLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~-----~G~I~IdG~di~~i--~~~~ 1311 (1623)
|+++||+++|++. ++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999643 6999999999999999999999999999999999999998 99999999998763 3556
Q ss_pred hhhceEEEcCCCccccccHHhhcCCC---CC-CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPF---SE-HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~---~~-~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
.|++++|+||++.+|+.|+++|+... .. .+ ++++.++++..++.+.+. ........+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHHH
Confidence 78899999999999999999999631 11 11 233555566655542221 23444557899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999876
Q ss_pred cCCC
Q 000351 1463 NEGS 1466 (1623)
Q Consensus 1463 ~~~~ 1466 (1623)
++..
T Consensus 233 ~~~~ 236 (247)
T TIGR00972 233 NPKE 236 (247)
T ss_pred CCCC
Confidence 5433
No 155
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-40 Score=376.43 Aligned_cols=211 Identities=27% Similarity=0.423 Sum_probs=180.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999876553 3678999
Q ss_pred EcCCCcccc-ccHHhhcCCCCC---C----CH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHH
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFSE---H----SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1386 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~~---~----sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaL 1386 (1623)
+||+|.+|. .|+++|+..... . .. +++.++++..++ +........+||||||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQL-----------DWLADRYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHHH
Confidence 999999986 599999974311 1 11 223344444444 333444456899999999999
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1387 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1387 ARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999999999999998653 7899999999998876 999999999999999999998754
Q ss_pred C
Q 000351 1464 E 1464 (1623)
Q Consensus 1464 ~ 1464 (1623)
.
T Consensus 228 ~ 228 (239)
T cd03296 228 P 228 (239)
T ss_pred C
Confidence 3
No 156
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.3e-40 Score=377.21 Aligned_cols=221 Identities=29% Similarity=0.478 Sum_probs=183.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i~ 1317 (1623)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999988776654 56799
Q ss_pred EEcCCCccccc-cHHhhcCCCCC-CCHHHH-------HHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSE-HSDADL-------WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~-~sd~~i-------~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|+||++.+|.+ |+++|+..... .....+ ...-....+.+.++.+ |++.........||||||||++|||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999987 99999963211 000000 0000111233444443 5665566667789999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 9999999999999999999999999999999865 57899999999999977 999999999999999999998653
No 157
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.2e-40 Score=396.31 Aligned_cols=206 Identities=28% Similarity=0.420 Sum_probs=180.0
Q ss_pred CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh----hhceEEEcCCCccccc
Q 000351 1253 PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG 1328 (1623)
Q Consensus 1253 ~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l----R~~i~~vpQdp~Lf~g 1328 (1623)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 369999999999999999999999999999999999999999999999999999998887 7789999999999975
Q ss_pred -cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEe
Q 000351 1329 -TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLD 1400 (1623)
Q Consensus 1329 -TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLD 1400 (1623)
||++|+.... ..+ ++++.++++.+++.++.. ....+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~-----------~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEH-----------RYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhh-----------CChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999996321 122 244566666666655444 444579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1401 EATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1401 EpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 9999999999999999999864 37999999999998766 999999999999999999999987655444
No 158
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-40 Score=377.89 Aligned_cols=211 Identities=30% Similarity=0.456 Sum_probs=180.9
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC---hHHhhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~---~~~lR~~ 1315 (1623)
|+++||+++|+.+ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 36999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred eEEEcCCCcccc-ccHHhhcCCCC------------CCC---HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChh
Q 000351 1316 LGIIPQSPVLFS-GTVRFNLDPFS------------EHS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 1379 (1623)
Q Consensus 1316 i~~vpQdp~Lf~-gTIr~NLd~~~------------~~s---d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgG 1379 (1623)
++|+||++.+|. .|+++|+.... ..+ ++++.++++.. |++.........||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV-----------GLLDKAYQRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc-----------CChhhhCCCcccCCHH
Confidence 999999999887 59999996311 011 22333444444 3444445556789999
Q ss_pred HHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecC
Q 000351 1380 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1380 QrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gt 1456 (1623)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999875 37899999999999985 99999999999999999
Q ss_pred hhHHh
Q 000351 1457 PEELL 1461 (1623)
Q Consensus 1457 p~eLl 1461 (1623)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 99874
No 159
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4e-40 Score=373.95 Aligned_cols=216 Identities=29% Similarity=0.447 Sum_probs=180.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i~ 1317 (1623)
|+++||+++|+.. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 5789999999643 69999999999999999999999999999999999999999999999999988776654 66799
Q ss_pred EEcCCCccccc-cHHhhcCCCCCC-CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSEH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~~-sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
|+||++.+|.+ |+++|+...... ...+..+ .+.+.++.+ .+++.........||||||||++||||++++|+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELF-PRLKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHH-HhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 999999643211 1111111 111222222 123444455566899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 999999999999999999999999875 47899999999999877 99999999999999999988753
No 160
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=383.93 Aligned_cols=215 Identities=28% Similarity=0.453 Sum_probs=188.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 38999999999643346999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEcCCC--ccccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp--~Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|+||+| .+++.|+++||.... ..+. +++.++++..++.+++.+. ...||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 466789999997421 1222 3355666666666555444 3579999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998764 7899999999999988999999999999999999998753
No 161
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.3e-40 Score=372.84 Aligned_cols=202 Identities=29% Similarity=0.418 Sum_probs=173.9
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH---Hhhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~---~lR~~ 1315 (1623)
|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964333699999999999999999999999999999999999999999999999999876543 46789
Q ss_pred eEEEcCCCccccc-cHHhhcCCC---CCC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPF---SEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~---~~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
++|+||+|.+|.. |+++|+... ... .++++.++++..++.++..+. ..+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHAL-----------PMQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHHH
Confidence 9999999998864 999999632 111 234566677777665554433 357999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceE
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1451 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1451 (1623)
|||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+|
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47899999999999976 999999999985
No 162
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.6e-40 Score=393.28 Aligned_cols=216 Identities=25% Similarity=0.414 Sum_probs=186.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...++ .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3899999999964 369999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEcCCCccccc-cHHhhcCCCC-------CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS-------EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~-------~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
||||++.+|+. |+++|+.+.. ..+ ++++.++++..++.++..+ ....||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 99999999975 9999997421 112 2345556666666544433 34579999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+|++.|+|+++..
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998764 6899999999999877 99999999999999999999987
Q ss_pred cCCChH
Q 000351 1463 NEGSSF 1468 (1623)
Q Consensus 1463 ~~~~~f 1468 (1623)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 765433
No 163
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.5e-40 Score=389.11 Aligned_cols=213 Identities=30% Similarity=0.462 Sum_probs=182.8
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
..|+++|++++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 35999999999964 36999999999999999999999999999999999999999999999999998754 4578999
Q ss_pred EEEcCCCcccc-ccHHhhcCCCCC---CCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSPVLFS-GTVRFNLDPFSE---HSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp~Lf~-gTIr~NLd~~~~---~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
||+||++.+|. .|+++|+..+.. .++. ++.++++.+++. ........+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-----------NKADAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hHhcCchhhCCHHHHHHHHHHH
Confidence 99999999986 599999974321 2222 233344444332 2233333579999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||+.+|++|+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 47899999999999977 999999999999999999999765
No 164
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=380.06 Aligned_cols=220 Identities=23% Similarity=0.429 Sum_probs=188.2
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CC
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FG 1308 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~ 1308 (1623)
...|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~i~nl~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 11 NIIISLQNVTISYGTF--EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred CceEEEEeEEEEECCE--EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 3469999999999643 69999999999999999999999999999999999987 589999999999863 45
Q ss_pred hHHhhhceEEEcCCCccccccHHhhcCCCCC---C---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1309 LMDLRKILGIIPQSPVLFSGTVRFNLDPFSE---H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1309 ~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~---~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
...+|++++|+||++.+|..|+++|+..... . .++++.++++.+++.+. ++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDE-------CKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcch-------hhhhhCCCcccCCHHHHH
Confidence 6778889999999999998899999974321 1 13445566666655432 233344556789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeC-----------ce
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDS-----------GR 1450 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----------G~ 1450 (1623)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988667899999999999876 999999996 67
Q ss_pred EeeecChhHHhhcC
Q 000351 1451 VLEYDTPEELLSNE 1464 (1623)
Q Consensus 1451 ive~Gtp~eLl~~~ 1464 (1623)
++|.|+++++..++
T Consensus 242 ~~~~~~~~~~~~~~ 255 (269)
T PRK14259 242 LVEFNETKKIFNSP 255 (269)
T ss_pred EEEeCCHHHHHhCc
Confidence 99999999998644
No 165
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.5e-40 Score=395.08 Aligned_cols=219 Identities=24% Similarity=0.397 Sum_probs=188.4
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCC--cEEEECCEecCCCChHHhh
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER--GRILIDGFDIAKFGLMDLR 1313 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~--G~I~IdG~di~~i~~~~lR 1313 (1623)
.|.|+++||+++|+.. .+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.++ .+
T Consensus 3 ~~~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGAN--TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECCe--EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 4679999999999743 69999999999999999999999999999999999999999 999999999987665 35
Q ss_pred hceEEEcCCCccccc-cHHhhcCCC---CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1314 KILGIIPQSPVLFSG-TVRFNLDPF---SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~g-TIr~NLd~~---~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
++|++|+|++.+|.. ||++|+.+. ...++ +++.++++..++.++. .....+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAA-----------AHLPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchh-----------hCChhhCCHHHHHHHH
Confidence 789999999999976 999999732 11232 2345555555554444 3344689999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC---CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK---SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~---~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|||||+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988654 6899999999999876 9999999999999999999999
Q ss_pred hcCCChHH
Q 000351 1462 SNEGSSFS 1469 (1623)
Q Consensus 1462 ~~~~~~f~ 1469 (1623)
+++...|-
T Consensus 228 ~~p~~~~~ 235 (362)
T TIGR03258 228 DAPADGFA 235 (362)
T ss_pred hCcCcHHH
Confidence 87655443
No 166
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=379.90 Aligned_cols=221 Identities=25% Similarity=0.426 Sum_probs=188.8
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--C
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--F 1307 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i 1307 (1623)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3457999999999964 3699999999999999999999999999999999999975 89999999999875 3
Q ss_pred ChHHhhhceEEEcCCCccccccHHhhcCCCC---CC--C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCCh
Q 000351 1308 GLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 1378 (1623)
Q Consensus 1308 ~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~--s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSg 1378 (1623)
+...+|++++|+||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+. ........+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 4567788999999999999889999996321 11 1 234566666666644332 233455678999
Q ss_pred hHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1379 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1379 GQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999976 999999999999999999
Q ss_pred hHHhhcC
Q 000351 1458 EELLSNE 1464 (1623)
Q Consensus 1458 ~eLl~~~ 1464 (1623)
+++..++
T Consensus 247 ~~~~~~~ 253 (267)
T PRK14235 247 EKMFTNP 253 (267)
T ss_pred HHHHhCC
Confidence 9987543
No 167
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-40 Score=376.56 Aligned_cols=214 Identities=28% Similarity=0.455 Sum_probs=183.7
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999752 369999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EcCCCcccc-ccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcch--hhhcCCCCCChhHHHHHHHHH
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDA--QVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt--~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+||+|.+|. .|+++|+.... ..+ ++++.++++.. |++. ...+...+||||||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l-----------~l~~~~~~~~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALV-----------GLDPAEFADRYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCCcHHHHhcChhhCCHHHHHHHHHHH
Confidence 999999996 59999996421 111 12233334433 3432 345556789999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
|++++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.++.
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 227 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSP 227 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCC
Confidence 99999999999999999999999999999998753 7999999999998866 9999999999999999999987543
No 168
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.9e-40 Score=377.16 Aligned_cols=211 Identities=29% Similarity=0.421 Sum_probs=179.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh---HHhhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~---~~lR~~ 1315 (1623)
|+++||+++|+++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 7899999999622 369999999999999999999999999999999999999999999999999987654 346888
Q ss_pred eEEEcCCCcccc-ccHHhhcCCCCC------------CC---HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChh
Q 000351 1316 LGIIPQSPVLFS-GTVRFNLDPFSE------------HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 1379 (1623)
Q Consensus 1316 i~~vpQdp~Lf~-gTIr~NLd~~~~------------~s---d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgG 1379 (1623)
++|+||++.+|. .|+++|+..... .. ++++.++++..+ ++........+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVG-----------LADKAYQRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcC-----------cHhhhcCCcccCCHH
Confidence 999999999886 599999963110 01 223444444444 444444556789999
Q ss_pred HHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecC
Q 000351 1380 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1380 QrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gt 1456 (1623)
||||++|||||+++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999999874 27899999999999866 99999999999999999
Q ss_pred hhHHh
Q 000351 1457 PEELL 1461 (1623)
Q Consensus 1457 p~eLl 1461 (1623)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99863
No 169
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=377.10 Aligned_cols=219 Identities=27% Similarity=0.443 Sum_probs=187.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCCChHHh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i~~~~l 1312 (1623)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 3899999999964 3699999999999999999999999999999999999974 69999999999988888888
Q ss_pred hhceEEEcCCCccc-cccHHhhcCCCC---C--CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1313 RKILGIIPQSPVLF-SGTVRFNLDPFS---E--HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf-~gTIr~NLd~~~---~--~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
|++++|+||+|.+| +.|+++|+.... . .. ++++.++++.+++.+.+. ........+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHHH
Confidence 99999999999765 569999996321 1 01 234566677666543221 1233445679999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999987678999999999999865 9999999999999999999997
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
+++.
T Consensus 234 ~~~~ 237 (250)
T PRK14247 234 TNPR 237 (250)
T ss_pred cCCc
Confidence 6543
No 170
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-40 Score=370.77 Aligned_cols=202 Identities=27% Similarity=0.423 Sum_probs=172.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999986543 4678999
Q ss_pred EcCCCcccc-ccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+ .......+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEG-----------LLNRYPHELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHHHHHHHHH
Confidence 999999886 59999996321 111 123444555544443 33444467999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999999876 9999999999998865
No 171
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-40 Score=384.69 Aligned_cols=214 Identities=24% Similarity=0.402 Sum_probs=181.9
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC----CChHH
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----FGLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~----i~~~~ 1311 (1623)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhhceEEEcCCC--ccccccHHhhcCCCC---CCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1312 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1312 lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
+|++++||+|+| .+|..|+.+|+.+.. ..+.+ ++.++++.+++.+ ........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 889999999998 788899999996421 12222 2344444444421 2234455789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+|+++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998764 47899999999999865 999999999999999999998
Q ss_pred hh
Q 000351 1461 LS 1462 (1623)
Q Consensus 1461 l~ 1462 (1623)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 75
No 172
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-40 Score=359.30 Aligned_cols=190 Identities=29% Similarity=0.459 Sum_probs=167.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC--------cEEEEc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG--------TVAYVP 685 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~--------~iay~~ 685 (1623)
.++++++++.|+. ..+|+|+||+|++||+++|+|||||||||||++|+|+.+|++| .+.+.+ .+|||+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G-~V~~~g~~v~~p~~~~~~vF 78 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSG-EVLLDGRPVTGPGPDIGYVF 78 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEECCcccCCCCCCEEEEe
Confidence 5899999999974 6799999999999999999999999999999999999999999 554433 699999
Q ss_pred cCcccCc-ccHHHHHhcCCCCC-------HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000351 686 QVSWIFN-ATVRDNILFGSAFE-------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 757 (1623)
Q Consensus 686 Q~~~l~~-~Tv~enI~~g~~~~-------~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~ 757 (1623)
|++-|+. .||+|||.|+.+.. .++..+.++.++|...-+..|+ .|||||||||||||||..
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARALAT 147 (248)
T ss_pred ccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHHHhc
Confidence 9998874 89999999985531 3467788899999988888885 899999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeC--CEEE
Q 000351 758 NSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHE--GMVK 818 (1623)
Q Consensus 758 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~--G~i~ 818 (1623)
+|+|+||||||+|||+.|+..+.+.+.+.+.+ ++|+++||||+++.- .+|||++|.+ |+|.
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999999988875543 899999999999864 5899999998 5553
No 173
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=378.23 Aligned_cols=218 Identities=28% Similarity=0.430 Sum_probs=185.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecC--CCChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA--KFGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~--~i~~~ 1310 (1623)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3699999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HhhhceEEEcCCCccccc-cHHhhcCCC---CCC--C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhH
Q 000351 1311 DLRKILGIIPQSPVLFSG-TVRFNLDPF---SEH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~g-TIr~NLd~~---~~~--s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQ 1380 (1623)
.+|++++|+||++.+|.+ |+++|+... ... . ++++.++++..++.+.+. ........+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHHH
Confidence 788899999999999976 999999632 111 1 133555566655533221 22344567899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
|||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988677999999999999876 99999999999999999999
Q ss_pred HhhcC
Q 000351 1460 LLSNE 1464 (1623)
Q Consensus 1460 Ll~~~ 1464 (1623)
+.+++
T Consensus 235 ~~~~~ 239 (253)
T PRK14267 235 VFENP 239 (253)
T ss_pred HHhCC
Confidence 87643
No 174
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=382.46 Aligned_cols=218 Identities=22% Similarity=0.407 Sum_probs=184.1
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC----ChHH
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i----~~~~ 1311 (1623)
|+++||+++|+++. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996432 3699999999999999999999999999999999999999999999999999754 3457
Q ss_pred hhhceEEEcCCC--ccccccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcch-hhhcCCCCCChhHHHHHH
Q 000351 1312 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1312 lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt-~v~e~G~~LSgGQrQrLa 1385 (1623)
+|++|+||||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++. .|+++ .......+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~--~gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMD--LGFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHH--cCCChhhhhCCcccCCHHHHHHHH
Confidence 889999999998 588889999996421 1233222221 2233333 36653 345567889999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999864 47999999999999865 99999999999999999999875
Q ss_pred c
Q 000351 1463 N 1463 (1623)
Q Consensus 1463 ~ 1463 (1623)
+
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 175
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-40 Score=374.29 Aligned_cols=214 Identities=30% Similarity=0.475 Sum_probs=182.2
Q ss_pred EEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---hh
Q 000351 1239 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR 1313 (1623)
|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 126999999999999999999999999999999999999999999999999998776543 47
Q ss_pred hceEEEcCCCcccc-ccHHhhcCCC---CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1314 KILGIIPQSPVLFS-GTVRFNLDPF---SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~-gTIr~NLd~~---~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+ .......+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLED-----------KADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhcChhhCCHHHHHHHH
Confidence 88999999999997 5999999631 1112 223445555554443 334445689999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998653 7899999999999876 99999999999999999998865
Q ss_pred c
Q 000351 1463 N 1463 (1623)
Q Consensus 1463 ~ 1463 (1623)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 176
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.8e-40 Score=396.14 Aligned_cols=213 Identities=27% Similarity=0.440 Sum_probs=189.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 3899999999964 37999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcc-ccccHHhhcCCCC-----------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1318 IIPQSPVL-FSGTVRFNLDPFS-----------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1318 ~vpQdp~L-f~gTIr~NLd~~~-----------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
++||++.+ |+.|+++|+.... ...++.+.++++.+++.++..+ ...+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHH
Confidence 99999987 5779999996321 1123457778888777665433 23579999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999875 47899999999999966 999999999999999999998753
No 177
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-39 Score=393.11 Aligned_cols=216 Identities=25% Similarity=0.418 Sum_probs=189.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+++ +++++
T Consensus 14 ~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 89 (375)
T PRK09452 14 LVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHVN 89 (375)
T ss_pred eEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5999999999964 3699999999999999999999999999999999999999999999999999887764 56899
Q ss_pred EEcCCCccccc-cHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
||+|++.+|+. ||++|+.+.- ..++ +++.++++..++.++..+.| ..||||||||++||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999976 9999997421 1222 34566677767666655544 5799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|+++|++||||||||+||..+.+.+.+.|++..+ +.|+|+|||+.+.+.. ||||++|++|+|++.|+|+++..++..
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~ 238 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKN 238 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999998764 7899999999999876 999999999999999999999987655
Q ss_pred hH
Q 000351 1467 SF 1468 (1623)
Q Consensus 1467 ~f 1468 (1623)
.|
T Consensus 239 ~~ 240 (375)
T PRK09452 239 LF 240 (375)
T ss_pred HH
Confidence 44
No 178
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-40 Score=395.00 Aligned_cols=216 Identities=23% Similarity=0.355 Sum_probs=185.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 3 ~l~i~~l~~~~~~~--~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGDV--VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGVG 78 (369)
T ss_pred EEEEEEEEEEeCCe--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCEE
Confidence 38999999999643 69999999999999999999999999999999999999999999999999987665 356899
Q ss_pred EEcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
||||++.+|.. |+++|+.+.. ..+ ++++.++++..++.++.. ....+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-----------~~~~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-----------RKPKALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999975 9999997421 122 234555666665544433 3345799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999988653 7899999999999876 999999999999999999999876554
Q ss_pred hH
Q 000351 1467 SF 1468 (1623)
Q Consensus 1467 ~f 1468 (1623)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 43
No 179
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.6e-39 Score=363.83 Aligned_cols=199 Identities=28% Similarity=0.423 Sum_probs=182.1
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhc
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~ 1315 (1623)
|+++||+++|++.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 3699999999999999999999999999999999999999999999998 6
Q ss_pred eEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1316 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1316 i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
|+|+||+|.+|++|+++|+.+....++++..++++.+++.+++..+|.|+++.+.+...+||+|||||++||||++.+|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998755556677888899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHH-HHHHHc-CCcEEEEeecCchhhhccCEEEEEeCce
Q 000351 1396 ILVLDEATAAVDVRTDALIQK-TIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGR 1450 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~-~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1450 (1623)
++||||||++||+++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999888876 566554 3689999999999998899999999985
No 180
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=382.21 Aligned_cols=213 Identities=30% Similarity=0.495 Sum_probs=183.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecC--CCChHHhhhc
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA--KFGLMDLRKI 1315 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~--~i~~~~lR~~ 1315 (1623)
.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 48999999999633 36999999999999999999999999999999999999999999999999984 3445678899
Q ss_pred eEEEcCCC--ccccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHH
Q 000351 1316 LGIIPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1386 (1623)
Q Consensus 1316 i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaL 1386 (1623)
++|+||+| .+|+.|+++|+.... ..+. +.+.++++..++.+ .......+||||||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHHH
Confidence 99999998 578899999996421 1232 23444555555543 3444567899999999999
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1387 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1387 ARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|++++.|+++++++
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999998754 7899999999999975 99999999999999999999875
No 181
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-37 Score=346.83 Aligned_cols=472 Identities=19% Similarity=0.238 Sum_probs=332.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCchhHHHHHhcccchhhhhhHHHHHHH
Q 000351 956 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 1035 (1623)
Q Consensus 956 ~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~ 1035 (1623)
++..++.+...-.+.+.+........+.+.-.+++.++.++++.+|+.-+++...++++.++++|+..|.-.. ..+..+
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~-s~lp~~ 128 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAF-SRLPEL 128 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehH-hhhHHH
Confidence 3333444444445555666777888899999999999999999999999999999999999999999998333 334456
Q ss_pred HHHHHHHhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHH
Q 000351 1036 MGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 1115 (1623)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~ 1115 (1623)
.+.....+++.+..++.+|.+..+.+..+++.++...+.++..-+--+...+....++.+++.-+.|.+..+..+...+.
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 67777778888888888887766555544444443333322222222223345567888999999999988776543322
Q ss_pred --HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 000351 1116 --ADINGK----SMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSL 1189 (1623)
Q Consensus 1116 --~~~~~~----~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~ 1189 (1623)
.+.+.. .-+...+..........|..+.+-.+.++.+++...... .+.. .+.. .....+.+-.+
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w---~st~----~a~t---ivlvlLflr~p 278 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGW---ASTN----VAAT---IVLVLLFLRTP 278 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---chhh----HHHH---HHHHHHHHhhH
Confidence 222211 111222222222344566665544333333322221111 0000 0111 11222334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccCCCCCCCCCCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEE
Q 000351 1190 LTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKV 1269 (1623)
Q Consensus 1190 l~~~~~~~~~~e~~~~aveRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~Gekv 1269 (1623)
+..++.....+-...+|..++.++...|..+. .....+.|+|. .|+++||.|+|.+.. --+..||++|++||.|
T Consensus 279 L~s~vgilP~l~~AqvA~~kiakle~~~~~a~--~~~~q~~p~~~---~lelrnvrfay~~~~-FhvgPiNl~ikrGelv 352 (546)
T COG4615 279 LLSAVGILPTLLTAQVAFNKIAKLELAPYKAD--FPRPQAFPDWK---TLELRNVRFAYQDNA-FHVGPINLTIKRGELV 352 (546)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhcCCcccc--CCCCCcCCccc---ceeeeeeeeccCccc-ceecceeeEEecCcEE
Confidence 77777777777788889999988766332221 11222333453 599999999997653 4588899999999999
Q ss_pred EEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHH
Q 000351 1270 GIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEAL 1349 (1623)
Q Consensus 1270 gIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL 1349 (1623)
-|+|.|||||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++- +-+..+.+.+..-|
T Consensus 353 FliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~----~e~~as~q~i~~~L 428 (546)
T COG4615 353 FLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG----PEGKASPQLIEKWL 428 (546)
T ss_pred EEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC----CccCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987642 33335677777777
Q ss_pred HHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEE
Q 000351 1350 ERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTM 1427 (1623)
Q Consensus 1350 ~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~Tv 1427 (1623)
++..+....+-. +| ... -..||-|||.|+++--|++.+.+|+++||=-+.-||.-.+...+.+-... .|+||
T Consensus 429 qrLel~~ktsl~-d~---~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI 502 (546)
T COG4615 429 QRLELAHKTSLN-DG---RFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTI 502 (546)
T ss_pred HHHHHhhhhccc-CC---ccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeE
Confidence 776555433322 11 111 13699999999999999999999999999999999999999988765433 58999
Q ss_pred EEeecCchhhhccCEEEEEeCceEeee
Q 000351 1428 LIIAHRLNTIIDCDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1428 I~IaHrl~ti~~~DrI~Vl~~G~ive~ 1454 (1623)
+.|||+-.-...+||++-|++|+++|.
T Consensus 503 ~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 503 FAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred EEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999986
No 182
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=368.30 Aligned_cols=208 Identities=29% Similarity=0.458 Sum_probs=179.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred EcCCCccccc-cHHhhcCCC---CCC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPF---SEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~---~~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.++.. |+++|+... ... .++++.++++..++.++..+ ...+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-----------LVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 9999998875 999999631 111 12345666666666544333 2357999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
+.+|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999998653 6899999999999876 999999999999999998875
No 183
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=377.87 Aligned_cols=215 Identities=27% Similarity=0.456 Sum_probs=184.9
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 48999999999643347999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEcCCC--ccccccHHhhcCCCC---CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSP--VLFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|+||+| .++..|+++|+.... ..+.++ +.++++..++.+ .......+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMED-----------YLDKEPQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HhhCCcccCCHHHHHHHHHHH
Confidence 999998 455679999996421 123332 334445544443 444455689999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 4899999999999888999999999999999999998753
No 184
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-40 Score=363.65 Aligned_cols=206 Identities=27% Similarity=0.435 Sum_probs=174.6
Q ss_pred cEEEEeeEEEcCCC--CCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE---------------
Q 000351 614 AISIRNGYFSWDSK--AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 676 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~--~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~--------------- 676 (1623)
.|+++++++.|... ....+|+||||+|++||+.||+|+||+|||||++++.++..|++|....
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 37899999999852 1246999999999999999999999999999999999999999994322
Q ss_pred EcCcEEEEccCcccCc-ccHHHHHhcCCC---CC-H---HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 677 IRGTVAYVPQVSWIFN-ATVRDNILFGSA---FE-P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 677 ~~~~iay~~Q~~~l~~-~Tv~enI~~g~~---~~-~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
.|.+||+++|++-|++ .||.+||.|..+ .+ . ++..+.++..+|.+..+..| .+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhH
Confidence 2346999999999985 899999998643 22 2 33444566677776666655 5899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHH
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~-~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 826 (1623)
|+|||||..+|+|||.|||||||||+|.+.|.+.+..- ..-|-|+++|||.++.++. ||||.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 99999999999999999999999999999999866553 3348999999999999985 899999999999999999999
Q ss_pred hhcC
Q 000351 827 SNNG 830 (1623)
Q Consensus 827 ~~~~ 830 (1623)
..++
T Consensus 230 F~~P 233 (339)
T COG1135 230 FANP 233 (339)
T ss_pred hcCc
Confidence 8654
No 185
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.9e-39 Score=371.57 Aligned_cols=215 Identities=28% Similarity=0.440 Sum_probs=182.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. .+++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEEE
Confidence 789999999964 3699999999999999999999999999999999999999999999999999876654 4458999
Q ss_pred EcCCCccc-cccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1319 IPQSPVLF-SGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1319 vpQdp~Lf-~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
+||++.++ ..|+++|+.... ..+.++.. ..+.++++.+ |++........+||||||||++||||++++|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999874 679999996432 12221111 1123344432 5555566666789999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999999999999875 37899999999999988999999999999999999998764
No 186
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=380.17 Aligned_cols=214 Identities=29% Similarity=0.404 Sum_probs=182.1
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh----hhc
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKI 1315 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l----R~~ 1315 (1623)
.++|++++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 567888888643 69999999999999999999999999999999999999999999999999988766543 467
Q ss_pred eEEEcCCCcccc-ccHHhhcCCC---CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFS-GTVRFNLDPF---SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~-gTIr~NLd~~---~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
++|+||++.+|. .|+++|+... .... ++++.++++..++.+++.+. ..+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKY-----------PDELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 999999999885 5999999631 1111 23455666666665544443 357999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
|||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999999864 37899999999999876 9999999999999999999998655
Q ss_pred CC
Q 000351 1465 GS 1466 (1623)
Q Consensus 1465 ~~ 1466 (1623)
..
T Consensus 253 ~~ 254 (269)
T cd03294 253 AN 254 (269)
T ss_pred Cc
Confidence 43
No 187
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=374.85 Aligned_cols=219 Identities=24% Similarity=0.391 Sum_probs=185.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc--C---CCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~--p---~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 48999999999643 69999999999999999999999999999999999997 3 58999999999864 3456
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC----CCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~----~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||++.+|.+|+++|+.... ..+++ ++.++++..++.+.+. ........+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHHH
Confidence 7788999999999999999999996321 11222 2344455555443321 2334556789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+++++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999999987
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
+++.
T Consensus 243 ~~~~ 246 (259)
T PRK14274 243 SNPD 246 (259)
T ss_pred hCCC
Confidence 6543
No 188
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=373.03 Aligned_cols=219 Identities=29% Similarity=0.445 Sum_probs=186.1
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--CCh
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGL 1309 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i~~ 1309 (1623)
|.|+++||+++|++. ++++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 469999999999643 699999999999999999999999999999999999863 69999999999875 355
Q ss_pred HHhhhceEEEcCCCccccccHHhhcCCCC---C-C----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1310 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---E-H----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1310 ~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~-~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
..+|++++|+||++.+|+.|+++|+.... . . .++++.++++.+++.+.+ .........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEV-------KDRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------HHHHhcCCCCCCHHHH
Confidence 67888999999999999999999996421 1 1 123345555555543322 2234455678999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668999999999999876 999999999999999999998
Q ss_pred hhcC
Q 000351 1461 LSNE 1464 (1623)
Q Consensus 1461 l~~~ 1464 (1623)
..++
T Consensus 233 ~~~~ 236 (250)
T PRK14240 233 FTNP 236 (250)
T ss_pred HhCC
Confidence 7554
No 189
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.8e-39 Score=385.03 Aligned_cols=223 Identities=22% Similarity=0.376 Sum_probs=186.6
Q ss_pred cEEEEEEEEEeCCC-----------CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC
Q 000351 1238 SIKFEDVVLRYRPE-----------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 1306 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~-----------~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~ 1306 (1623)
-|+++|++++|+.+ ..++++||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 48999999999531 2369999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---hhhceEEEcCCC--cccc-ccHHhhcCC----CC-CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhc
Q 000351 1307 FGLMD---LRKILGIIPQSP--VLFS-GTVRFNLDP----FS-EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSE 1371 (1623)
Q Consensus 1307 i~~~~---lR~~i~~vpQdp--~Lf~-gTIr~NLd~----~~-~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e 1371 (1623)
++... +|++|+||||+| .+++ .||++|+.. +. ..+.++ +.++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 87654 577899999999 4774 699999852 21 233333 344455554421 12344
Q ss_pred CCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeC
Q 000351 1372 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDS 1448 (1623)
Q Consensus 1372 ~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1448 (1623)
....||||||||++|||||+.+|++||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998653 7899999999999987 999999999
Q ss_pred ceEeeecChhHHhhcCCChHHH
Q 000351 1449 GRVLEYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1449 G~ive~Gtp~eLl~~~~~~f~~ 1470 (1623)
|+|+|.|+++++.+++...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999998766544544
No 190
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=375.70 Aligned_cols=220 Identities=27% Similarity=0.414 Sum_probs=185.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCCC--hH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG--LM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i~--~~ 1310 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+ ..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 5999999999964 3699999999999999999999999999999999999985 7999999999986532 34
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
.+|+.++|+||++.+|+.|+++|+.... ..+. +++.++++.+++.+.+ +.........||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHHH
Confidence 6788899999999999999999996321 1222 2345556655543221 223344556899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
++|||||+.+|+||||||||++||+++...+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+++++..
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987668999999999999876 99999999999999999999976
Q ss_pred cCCC
Q 000351 1463 NEGS 1466 (1623)
Q Consensus 1463 ~~~~ 1466 (1623)
++..
T Consensus 243 ~~~~ 246 (258)
T PRK14268 243 NPRE 246 (258)
T ss_pred CCCC
Confidence 5443
No 191
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.6e-39 Score=374.24 Aligned_cols=214 Identities=29% Similarity=0.501 Sum_probs=182.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC----------
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---------- 1308 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~---------- 1308 (1623)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 36999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHhhhceEEEcCCCcccc-ccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCC
Q 000351 1309 ---LMDLRKILGIIPQSPVLFS-GTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1309 ---~~~lR~~i~~vpQdp~Lf~-gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~L 1376 (1623)
...+|++++++||++.+|. .|+++|+... .... ++++.++++..+ ++.........|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVG-----------LADKADHMPAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------ChhHhhcChhhc
Confidence 2356889999999999885 6999999641 1111 223444444444 444444555689
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
|||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999966 99999999999999
Q ss_pred ecChhHHhhcCC
Q 000351 1454 YDTPEELLSNEG 1465 (1623)
Q Consensus 1454 ~Gtp~eLl~~~~ 1465 (1623)
.|+++++.+...
T Consensus 228 ~g~~~~~~~~~~ 239 (252)
T TIGR03005 228 QGKPDEIFRQPK 239 (252)
T ss_pred eCCHHHHhcCCC
Confidence 999999976543
No 192
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=374.13 Aligned_cols=219 Identities=25% Similarity=0.409 Sum_probs=185.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc--C---CCcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~--p---~~G~I~IdG~di~~i--~~~ 1310 (1623)
.|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999964 369999999999999999999999999999999999953 6 499999999998643 345
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|+.++|+||+|.+|+.|+++|+... +... ++++.++++.+++.+.+ .+.......+|||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHHH
Confidence 678899999999999999999999632 1111 23344556665554322 23345566789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999876 9999999999999999999997
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
+++.
T Consensus 236 ~~~~ 239 (252)
T PRK14239 236 MNPK 239 (252)
T ss_pred hCCC
Confidence 6543
No 193
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=382.49 Aligned_cols=215 Identities=21% Similarity=0.335 Sum_probs=181.0
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC---------
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--------- 1306 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~--------- 1306 (1623)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 89999999996432 259999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CChHHhhhceEEEcCCC--ccccccHHhhcCCCC---CCCHH----HHHHHHHHhcHHHHHHhcc
Q 000351 1307 ---------------FGLMDLRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNS 1362 (1623)
Q Consensus 1307 ---------------i~~~~lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~----~i~~aL~~~~l~~~i~~lp 1362 (1623)
.+...+|++||||||+| .+|..||++||.+.. ..+.+ ++.++++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------ 156 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE------ 156 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh------
Confidence 13456788999999987 678889999997421 12332 3444555544421
Q ss_pred CCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-c
Q 000351 1363 LGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-C 1440 (1623)
Q Consensus 1363 ~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~ 1440 (1623)
........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. |
T Consensus 157 ----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 157 ----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 23344556899999999999999999999999999999999999999999998864 47999999999998865 9
Q ss_pred CEEEEEeCceEeeecChhHHhhc
Q 000351 1441 DRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1441 DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||++|++|++++.|+++++.++
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999998754
No 194
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=374.44 Aligned_cols=219 Identities=29% Similarity=0.419 Sum_probs=184.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 369999999999999999999999999999999999997 479999999999864 3445
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC---CCC-----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EHS-----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~s-----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|+.++|+||++.+|+.|+++|+.+.. ... ++++.++++..++++.. .........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHHH
Confidence 6788899999999999999999997421 111 12344555555543211 12234455689999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988677999999999999877 9999999999999999999987
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
..+.
T Consensus 235 ~~~~ 238 (251)
T PRK14251 235 IAPK 238 (251)
T ss_pred hCCC
Confidence 6543
No 195
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-39 Score=367.88 Aligned_cols=205 Identities=31% Similarity=0.509 Sum_probs=175.4
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 78999999996431 169999999999999999999999999999999999999999999999999976 456778899
Q ss_pred EEEcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+|+||+|.+|.+ |+++|+.... ..+ ++++.++++..++. ........+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGME-----------ELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----------HHHhhhhhhcCHHHHHHHHHHH
Confidence 999999999986 9999995321 112 23344555555444 3344455689999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
|++++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999864 47899999999999876 9999999999998765
No 196
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=375.41 Aligned_cols=219 Identities=25% Similarity=0.434 Sum_probs=188.2
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CCh
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 1309 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~ 1309 (1623)
..|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 35999999999964 479999999999999999999999999999999999997 579999999999864 345
Q ss_pred HHhhhceEEEcCCCccccccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1310 MDLRKILGIIPQSPVLFSGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1310 ~~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
..+|+.++|+||++.+|.+|+++|+... +..+ ++++.++++..++.+.+ +...+.....||||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHHH
Confidence 6778899999999999999999999642 1111 23455666666664433 2334566678999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999866 999999999999999999999
Q ss_pred hhcC
Q 000351 1461 LSNE 1464 (1623)
Q Consensus 1461 l~~~ 1464 (1623)
.+.+
T Consensus 250 ~~~~ 253 (267)
T PRK14237 250 FTNP 253 (267)
T ss_pred hcCC
Confidence 7643
No 197
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=374.20 Aligned_cols=219 Identities=28% Similarity=0.414 Sum_probs=185.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcc---ccC--CCcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI---VEL--ERGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl---~~p--~~G~I~IdG~di~~i--~~~ 1310 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 4899999999964 3699999999999999999999999999999999997 344 589999999999764 345
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC---CCC-----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF---SEH-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~---~~~-----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||++.+|..|+++|+... ... .++++.++++.+++.+.+ ++...+.+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHHH
Confidence 678899999999999989999999631 111 123355556655553322 23345566789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999866 9999999999999999999998
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
+++.
T Consensus 234 ~~~~ 237 (250)
T PRK14245 234 TNPE 237 (250)
T ss_pred cCCC
Confidence 6543
No 198
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=365.84 Aligned_cols=202 Identities=27% Similarity=0.452 Sum_probs=176.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++||+++|+.. ++++|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 5799999999643 6999999999999 99999999999999999999999999999999999998766 678899999
Q ss_pred EcCCCccccc-cHHhhcCCC---CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPF---SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~---~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||+|.+|.+ |+++|+... ...+ ++++.++++..++.++.+ ....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999999976 999998631 1112 234566666666654432 23357999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999988777999999999999976 9999999999998865
No 199
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=379.70 Aligned_cols=215 Identities=28% Similarity=0.407 Sum_probs=181.7
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC----CChHH
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----FGLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~----i~~~~ 1311 (1623)
|+++|++++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996421 369999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhhceEEEcCCC--ccccccHHhhcCCCC---CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1312 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1312 lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.|++++||||+| .+|+.|+++|+.... ..+.++ +.++++.+++.+ .........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 788999999998 688889999996321 123322 334444444421 2234455689999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999876 99999999999999999999
Q ss_pred Hhhc
Q 000351 1460 LLSN 1463 (1623)
Q Consensus 1460 Ll~~ 1463 (1623)
+.++
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8753
No 200
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=375.66 Aligned_cols=219 Identities=25% Similarity=0.434 Sum_probs=185.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCCCC--hHH
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKFG--LMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~i~--~~~ 1311 (1623)
-+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999964 369999999999999999999999999999999999986 47999999999987643 345
Q ss_pred hhhceEEEcCCCccccccHHhhcCCC---CCC------CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPF---SEH------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~---~~~------sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
+|++++|+||++.+|.+|+++|+... ... .++++.++++..++.+.+ .+.++..+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHHH
Confidence 78899999999999999999999632 111 123355556665553321 12344556789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999876 9999999999999999999998
Q ss_pred hcCCC
Q 000351 1462 SNEGS 1466 (1623)
Q Consensus 1462 ~~~~~ 1466 (1623)
+.+..
T Consensus 237 ~~~~~ 241 (251)
T PRK14244 237 KNPQS 241 (251)
T ss_pred cCCCC
Confidence 66543
No 201
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-39 Score=364.25 Aligned_cols=202 Identities=27% Similarity=0.435 Sum_probs=177.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++.+. ...|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999954 3799999999999999999999999999999999999999999999999998764 567888999
Q ss_pred EcCCCcccc-ccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
+||++.+|. .|+++|+..+. ..+++++.++++..++.+...+ ....||||||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998884 69999996421 2345667777888777655433 23579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999865 47899999999999976 9999999999998865
No 202
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-38 Score=371.49 Aligned_cols=211 Identities=24% Similarity=0.365 Sum_probs=190.5
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhc
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 1315 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~ 1315 (1623)
.+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 3469999999952 3699999999999999999999999999999999999999999999998 3
Q ss_pred eEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1316 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1316 i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998543344556677888889999999999999999988889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1396 ILVLDEATAAVDVRTDALIQKT-IREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~-L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||||||||++||+++...+.+. +++..+++|||+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999988775 4555568999999999999988999999999999999999998754
No 203
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=372.19 Aligned_cols=221 Identities=22% Similarity=0.390 Sum_probs=186.7
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc--C---CCcEEEECCEecCCC--C
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAKF--G 1308 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~--p---~~G~I~IdG~di~~i--~ 1308 (1623)
+|.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999964 369999999999999999999999999999999999986 4 689999999998753 3
Q ss_pred hHHhhhceEEEcCCCcccc-ccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChh
Q 000351 1309 LMDLRKILGIIPQSPVLFS-GTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 1379 (1623)
Q Consensus 1309 ~~~lR~~i~~vpQdp~Lf~-gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgG 1379 (1623)
...+|++++|+||++.+|. .|+++|+... ...+ ++++.++++..++.+.+. ........+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVK-------DRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcCcCCHH
Confidence 4567889999999999997 5999999631 1111 233455566655543332 2233456789999
Q ss_pred HHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChh
Q 000351 1380 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 1458 (1623)
Q Consensus 1380 QrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~ 1458 (1623)
||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999876 9999999999999999999
Q ss_pred HHhhcCC
Q 000351 1459 ELLSNEG 1465 (1623)
Q Consensus 1459 eLl~~~~ 1465 (1623)
++...+.
T Consensus 233 ~~~~~~~ 239 (252)
T PRK14256 233 KIFTTPE 239 (252)
T ss_pred HHHhCCC
Confidence 9876543
No 204
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=378.13 Aligned_cols=213 Identities=25% Similarity=0.446 Sum_probs=185.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 359999999999999999999999999999999999999999999999999988777788999999
Q ss_pred EcCCC--ccccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1319 IPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1319 vpQdp--~Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
+||+| .+|+.|+++|+.... ..+. +.+.++++.+++.+...+ ....||||||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDR-----------VPHHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHHHHHHH
Confidence 99998 477889999996321 1222 235566666666554433 345799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||||++|++|++++.|+++++++.
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999998753 7899999999999965 999999999999999999999753
No 205
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=369.34 Aligned_cols=208 Identities=26% Similarity=0.401 Sum_probs=177.3
Q ss_pred cEEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---h
Q 000351 1238 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---l 1312 (1623)
.++++||+++|+++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999996432 36999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-hceEEEcCCCccccc-cHHhhcCCC---CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1313 R-KILGIIPQSPVLFSG-TVRFNLDPF---SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1313 R-~~i~~vpQdp~Lf~g-TIr~NLd~~---~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
| ++++|+||+|.+|.. |+++|+... ..... +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 679999999998876 999999641 12222 2344445544 44444445556899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeCceEeeecC
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gt 1456 (1623)
++||||++.+|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999864 4789999999999999999999999999998765
No 206
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.4e-39 Score=354.42 Aligned_cols=178 Identities=33% Similarity=0.574 Sum_probs=166.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999965434699999999999999999999999999999999999999999999999998776 5678889999
Q ss_pred EcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1398 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILl 1398 (1623)
+||+|.+|+.|+++|+ ..+||||||||++||||++++|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCceEeeec
Q 000351 1399 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1399 LDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~G 1455 (1623)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999887789999999999999889999999999998865
No 207
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.3e-39 Score=371.18 Aligned_cols=219 Identities=21% Similarity=0.371 Sum_probs=183.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i~ 1317 (1623)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+.++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 799999999964 369999999999999999999999999999999999999999999999999988776654 45799
Q ss_pred EEcCCCccccc-cHHhhcCCCCCCCHHHH-------HHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSEHSDADL-------WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i-------~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
|+||++.+|.+ |+++|+....... ..+ ........+.+.++.+ |++.........||||||||++||||
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999987 9999997432100 000 0000111223334332 55555556667899999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
++++|+||||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998778999999999999976 99999999999999999999864
No 208
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-39 Score=363.83 Aligned_cols=198 Identities=27% Similarity=0.461 Sum_probs=171.6
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEE
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 1319 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~v 1319 (1623)
+++|++++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 369999999999999999999999999999999999999999999999999864 4567789999
Q ss_pred cCCC--ccccccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1320 PQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1320 pQdp--~Lf~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
||+| .+|..|+++|+.... ...++++.++++..++.++..+. ...||||||||++||||++.+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERH-----------PLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCC-----------chhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467889999997432 11234677777777776554433 3479999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEe
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 1452 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1452 (1623)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999873 57899999999999976 9999999999985
No 209
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-39 Score=368.62 Aligned_cols=202 Identities=30% Similarity=0.412 Sum_probs=171.4
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH----h
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD----L 1312 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~----l 1312 (1623)
|+++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 36999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hhceEEEcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1313 RKILGIIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
|++++|+||+|.+|.+ |+++|+.... ... ++++.++++.. |++........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERV-----------GLGDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHc-----------CCchhhhcChhhcCHHHHHHH
Confidence 5789999999999976 9999996421 111 12333444443 444444555568999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceE
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRV 1451 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1451 (1623)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999975
No 210
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=372.76 Aligned_cols=218 Identities=27% Similarity=0.436 Sum_probs=186.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i--~~~ 1310 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 3899999999964 3699999999999999999999999999999999999984 899999999998753 344
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||+|.+|..|+++|+... +... ++++.++++..++.+.+ +........+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHHH
Confidence 678899999999999999999999732 1111 23355566666654322 22345566789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999988778999999999998866 9999999999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
++.
T Consensus 234 ~~~ 236 (250)
T PRK14262 234 ERP 236 (250)
T ss_pred hCC
Confidence 654
No 211
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=375.24 Aligned_cols=218 Identities=26% Similarity=0.482 Sum_probs=184.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999964 369999999999999999999999999999999999875 789999999999865 3345
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||++.+|++|+++|+... .... ++.+.++++..++.+.+ .........+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHHH
Confidence 678899999999999999999999632 1111 23345555555443211 12344556789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999998876 9999999999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
.+.
T Consensus 252 ~~~ 254 (268)
T PRK14248 252 TSP 254 (268)
T ss_pred hCC
Confidence 654
No 212
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.9e-39 Score=370.86 Aligned_cols=215 Identities=29% Similarity=0.451 Sum_probs=182.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i~ 1317 (1623)
|+++||+++|+. +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988776554 56799
Q ss_pred EEcCCCccccc-cHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
|+||++.+|.+ |+++|+.... ....++.. ..+.+.++.+ |++........+||||||||++||||++.+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATN 151 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999987 9999996421 11111111 1223344433 555555666678999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999998865 47899999999998876 99999999999999999998764
No 213
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=350.39 Aligned_cols=202 Identities=28% Similarity=0.452 Sum_probs=175.2
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.|+++|+|+.|. ++.+++|+||+|++||+++++|||||||||+|++|.++++|++| .+.+ |.+
T Consensus 1 MI~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G-~I~i~g~~i~~~d~~~LRr~ 76 (309)
T COG1125 1 MIEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSG-EILIDGEDISDLDPVELRRK 76 (309)
T ss_pred CceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCc-eEEECCeecccCCHHHHHHh
Confidence 378999999997 46899999999999999999999999999999999999999999 4443 447
Q ss_pred EEEEccCcccC-cccHHHHHhcCC---CCCHH----HHHHHHHHhCchh--HHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 681 VAYVPQVSWIF-NATVRDNILFGS---AFEPA----RYEKAIDVTSLQH--DLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 681 iay~~Q~~~l~-~~Tv~enI~~g~---~~~~~----~~~~~~~~~~l~~--~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
||||-|+.-|| +.||.|||..-. .++++ +.++.++..+|++ ..+..|+ .|||||+|||.
T Consensus 77 IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVG 145 (309)
T COG1125 77 IGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHH
Confidence 99999999998 789999998642 24544 4556677788864 4556664 89999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcch-hhhcCEEEEEeCCEEEEecChhHHhh
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHF-LSQVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
+||||..+|+|+|+||||+||||-+++.+-+.+..... -|+|+|+||||+++ ++.+|||.+|++|+|++.+++++++.
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999887766433 38999999999998 46799999999999999999999987
Q ss_pred cC
Q 000351 829 NG 830 (1623)
Q Consensus 829 ~~ 830 (1623)
+.
T Consensus 226 ~P 227 (309)
T COG1125 226 NP 227 (309)
T ss_pred Cc
Confidence 64
No 214
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.7e-39 Score=375.06 Aligned_cols=214 Identities=21% Similarity=0.323 Sum_probs=182.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH---Hhhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~---~lR~ 1314 (1623)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999876653 3577
Q ss_pred ceEEEcCCCccccc-cHHhhcCCC----CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDPF----SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~~----~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
+++|+||++.+|.+ |+++|+... ...+. +.+.++++..++ +........+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGL-----------RGAAKLMPSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHHH
Confidence 89999999999986 999999631 11222 223344444444 33333445679999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998643 7899999999999877 99999999999999999999886
Q ss_pred cC
Q 000351 1463 NE 1464 (1623)
Q Consensus 1463 ~~ 1464 (1623)
+.
T Consensus 234 ~~ 235 (269)
T PRK11831 234 NP 235 (269)
T ss_pred CC
Confidence 43
No 215
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=373.24 Aligned_cols=216 Identities=26% Similarity=0.376 Sum_probs=183.3
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC-------
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG------- 1308 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~------- 1308 (1623)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++....
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 456999999999964 36999999999999999999999999999999999999999999999999986421
Q ss_pred ------hHHhhhceEEEcCCCccccc-cHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhh-hcC
Q 000351 1309 ------LMDLRKILGIIPQSPVLFSG-TVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQV-SEA 1372 (1623)
Q Consensus 1309 ------~~~lR~~i~~vpQdp~Lf~g-TIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v-~e~ 1372 (1623)
...+|++++|+||++.+|+. |+++|+... .... ++++.++++..++ +... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~ 149 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGI-----------DERAQGKY 149 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-----------ChhhhhCC
Confidence 34668899999999999975 999999631 1112 1234444444444 3332 445
Q ss_pred CCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCce
Q 000351 1373 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGR 1450 (1623)
Q Consensus 1373 G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1450 (1623)
...||||||||++|||||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 56899999999999999999999999999999999999999999999875 47999999999999987 99999999999
Q ss_pred EeeecChhHHhhcC
Q 000351 1451 VLEYDTPEELLSNE 1464 (1623)
Q Consensus 1451 ive~Gtp~eLl~~~ 1464 (1623)
+++.|+++++.+..
T Consensus 230 i~~~~~~~~~~~~~ 243 (257)
T PRK10619 230 IEEEGAPEQLFGNP 243 (257)
T ss_pred EEEeCCHHHhhhCc
Confidence 99999999987543
No 216
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=376.72 Aligned_cols=216 Identities=27% Similarity=0.436 Sum_probs=187.4
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCC---cEEEECCEecCCCChHHhh
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER---GRILIDGFDIAKFGLMDLR 1313 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~---G~I~IdG~di~~i~~~~lR 1313 (1623)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4599999999996433469999999999999999999999999999999999999987 8999999999887777888
Q ss_pred hceEEEcCCC--ccccccHHhhcCCC---CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1314 KILGIIPQSP--VLFSGTVRFNLDPF---SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1314 ~~i~~vpQdp--~Lf~gTIr~NLd~~---~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
++++|+||+| .+++.|+++|+.+. ...++ +++.++++.+++.++..+ ...+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDS-----------EPANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHH
Confidence 9999999998 46678999999742 12233 235556666666554443 3468999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++..
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 789999999999998899999999999999999999875
Q ss_pred c
Q 000351 1463 N 1463 (1623)
Q Consensus 1463 ~ 1463 (1623)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 217
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=382.41 Aligned_cols=223 Identities=25% Similarity=0.383 Sum_probs=185.9
Q ss_pred cEEEEEEEEEeCCC--------CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh
Q 000351 1238 SIKFEDVVLRYRPE--------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 1309 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~--------~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~ 1309 (1623)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2369999999999999999999999999999999999999999999999999988875
Q ss_pred H---HhhhceEEEcCCCc--cccc-cHHhhcCC----CCCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCC
Q 000351 1310 M---DLRKILGIIPQSPV--LFSG-TVRFNLDP----FSEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1375 (1623)
Q Consensus 1310 ~---~lR~~i~~vpQdp~--Lf~g-TIr~NLd~----~~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~ 1375 (1623)
. .+|++|+||||+|. |++. ||.+|+.. ..... .+++.++++.+++.+ .........
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP----------EHYDRYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh----------HHhcCCCcc
Confidence 4 46778999999994 5553 88888741 11112 233555566665532 112333467
Q ss_pred CChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEe
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVL 1452 (1623)
Q Consensus 1376 LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1452 (1623)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998653 7899999999999986 9999999999999
Q ss_pred eecChhHHhhcCCChHHH
Q 000351 1453 EYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1453 e~Gtp~eLl~~~~~~f~~ 1470 (1623)
|.|+++++.+++...|.+
T Consensus 235 e~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred EECCHHHHhcCCCCHHHH
Confidence 999999999876555554
No 218
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=376.28 Aligned_cols=212 Identities=26% Similarity=0.392 Sum_probs=185.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 4999999999964 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCccccc-cHHhhcCCCC-----------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS-----------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~-----------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
|+||++.++.+ |+++|+.... ...++++.++++.+++.+++.+. ..+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHHH
Confidence 99999877665 9999996321 01233466677776665544333 3479999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999999874 37899999999999976 99999999999999999998764
No 219
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=373.21 Aligned_cols=219 Identities=25% Similarity=0.416 Sum_probs=186.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~~ 1310 (1623)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 24 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 101 (271)
T PRK14238 24 VFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVE 101 (271)
T ss_pred EEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHH
Confidence 59999999999643 69999999999999999999999999999999999997 699999999999853 3456
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC---CCCCH-----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF---SEHSD-----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~---~~~sd-----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||+|.+|..|+++|+... ...++ +.+.++++..++.+ ++.......+..|||||||
T Consensus 102 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 102 ELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHHH
Confidence 778899999999999989999999631 12222 12333444443321 3334455667789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999999997
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
+++.
T Consensus 255 ~~~~ 258 (271)
T PRK14238 255 SNPS 258 (271)
T ss_pred cCCC
Confidence 6543
No 220
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=390.29 Aligned_cols=204 Identities=31% Similarity=0.437 Sum_probs=175.7
Q ss_pred CcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh----hhceEEEcCCCccccc-
Q 000351 1254 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG- 1328 (1623)
Q Consensus 1254 ~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l----R~~i~~vpQdp~Lf~g- 1328 (1623)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998877654 3579999999999975
Q ss_pred cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeC
Q 000351 1329 TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 1401 (1623)
Q Consensus 1329 TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDE 1401 (1623)
|+++|+.... ..+ ++++.++++.+++.++..+ ...+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~-----------~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS-----------YPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhc-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 9999996321 112 2345556666666544443 345799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChH
Q 000351 1402 ATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSF 1468 (1623)
Q Consensus 1402 pTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f 1468 (1623)
||++||+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++++++.++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999999864 47899999999999876 99999999999999999999987654444
No 221
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=375.87 Aligned_cols=213 Identities=29% Similarity=0.499 Sum_probs=182.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC-hHHhhhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDLRKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~-~~~lR~~i~ 1317 (1623)
|+++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ...++++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 36999999999999999999999999999999999999999999999999998765 356788999
Q ss_pred EEcCCCc--cccccHHhhcCCCCC---CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSPV--LFSGTVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp~--Lf~gTIr~NLd~~~~---~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|+||+|. +++.|+++|+..... .+ ++.+.++++..++ +.........||||||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGL-----------EKYRHRSPKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC-----------HHHhcCCcccCCHHHHHHHHHHH
Confidence 9999985 567899999974321 12 2234444555444 44444445689999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||+.+|+||||||||++||+.+...+.+.|++.. +++|||++||+++.+..||||++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998865 47999999999999988999999999999999999998753
No 222
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=9.5e-39 Score=369.24 Aligned_cols=217 Identities=26% Similarity=0.454 Sum_probs=182.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC--------hH
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--------LM 1310 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~--------~~ 1310 (1623)
|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..
T Consensus 4 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 4 IEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred EEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 8999999999643 6999999999999999999999999999999999999999999999999987542 34
Q ss_pred HhhhceEEEcCCCcccc-ccHHhhcCCC----CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1311 DLRKILGIIPQSPVLFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~-gTIr~NLd~~----~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
.+|++++|+||++.+|. .|+++|+... .....++..+ .+.+.++.+ |++........+||||||||++
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~ 154 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQRVA 154 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHHHH
Confidence 57889999999999886 5999999631 1122221111 122333332 4544455566789999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 234 (250)
T PRK11264 155 IARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFAD 234 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999865 47899999999999976 999999999999999999998754
Q ss_pred C
Q 000351 1464 E 1464 (1623)
Q Consensus 1464 ~ 1464 (1623)
+
T Consensus 235 ~ 235 (250)
T PRK11264 235 P 235 (250)
T ss_pred C
Confidence 3
No 223
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4e-40 Score=342.74 Aligned_cols=224 Identities=28% Similarity=0.449 Sum_probs=192.1
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhc
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKI 1315 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~ 1315 (1623)
+.+..+|+.++|... +|++||||+|++||.||+.|||||||||.+.++.|+..|++|+|.+||.||+.+|.+.. |-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 358899999999754 79999999999999999999999999999999999999999999999999999998864 556
Q ss_pred eEEEcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
|||+||||.+|.+ ||++||...-+..+.+...+-++..+.+.++.+ .+...-...|..||||||+|+-|||||..+|
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~P 158 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAANP 158 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcCC
Confidence 9999999999987 999999743333332333333444444555543 5556666678899999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh-hhccCEEEEEeCceEeeecChhHHhhcC
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-IIDCDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~t-i~~~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
+.++||||.|++||-+-..||+.|+... +|--|++.-|...+ +.-|||.+++.+|+|...|+|+|+.+++
T Consensus 159 ~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 159 KFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred CEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 9999999999999999999999999875 47789999999765 4559999999999999999999999865
No 224
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-40 Score=342.06 Aligned_cols=217 Identities=26% Similarity=0.454 Sum_probs=184.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
+++.+++++|++. ..+++||||+++.||++||.|+|||||||++++|..++.|++|.|.|||.|+.+ .+...|++||+
T Consensus 2 l~v~~l~K~y~~~-v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGSK-VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccCH-HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcce
Confidence 6889999999763 358999999999999999999999999999999999999999999999999988 56789999999
Q ss_pred EcCCCccccc-cHHhhcCCCCC---CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~~---~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
++-+.-++.. |+||||.+|+. .++.++. +...+..++ .+++..+..+..+||-|+|||++|||||+++|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~--l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKR--LQLLEYLDRRVGEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHH--hChHHHHHHHHhhhchhhHHHHHHHHHHhcCC
Confidence 9977778755 99999987642 2333222 122222222 23444444445579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
+|+|||||||+||..+.+.+++.|++... +++||+-||.+++++. ||||+++.+|+++..|+++++.++.
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 99999999999999999999999998764 8999999999999996 9999999999999999999998653
No 225
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=370.09 Aligned_cols=218 Identities=26% Similarity=0.425 Sum_probs=186.8
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC-----CcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~-----~G~I~IdG~di~~i--~~~ 1310 (1623)
.|+++|++++|+. +++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999964 36999999999999999999999999999999999999997 69999999998653 445
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC---C-CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS---E-HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~-~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|+.++|+||+|.+|+.|+++|+.... . .. ++.+.++++..++++.+. ......+.+|||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHHH
Confidence 7788999999999999999999997421 1 11 123444555555544332 3345667789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999987 8999999999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14249 235 SRP 237 (251)
T ss_pred hCC
Confidence 654
No 226
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=376.48 Aligned_cols=215 Identities=27% Similarity=0.419 Sum_probs=186.6
Q ss_pred cEEEEEEEEEeCCC-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1238 SIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999642 23599999999999999999999999999999999999999999999999999887778889999
Q ss_pred EEEcCCC--ccccccHHhhcCCCC---CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSP--VLFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+|+||+| .++..|+.+|+.... ..++++ +.++++.+++.++.. .....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKT-----------REPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 467789999996321 223333 345566656554433 33467999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998754 7899999999999988999999999999999999998754
No 227
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.1e-39 Score=382.57 Aligned_cols=212 Identities=31% Similarity=0.461 Sum_probs=181.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGDK--VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCCe--EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 48999999999643 699999999999999999999999999999999999999999999999998764 356788999
Q ss_pred EEcCCCcccc-ccHHhhcCCCC---CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFS-GTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~-gTIr~NLd~~~---~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
|+||++.++. .|+++|+..+. ..++.+ +.++++..+ ++.........||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-----------l~~~~~~~~~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-----------LESKADVRVALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCC-----------ChhHhcCchhhCCHHHHHHHHHHHH
Confidence 9999999885 59999996321 123332 223333333 3333344446799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|+++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++...
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47899999999999976 999999999999999999998754
No 228
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-39 Score=389.13 Aligned_cols=218 Identities=23% Similarity=0.406 Sum_probs=186.9
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
..|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.++ .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 369999999999999999999999999999999999999999999999999987765 46789
Q ss_pred EEEcCCCccccc-cHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+||+|++.+|+. ||++|+.+.. ..+. +++.++++..++.++. .....+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHH
Confidence 999999999976 9999997421 1222 2345555555554443 3334579999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCC
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 1465 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~ 1465 (1623)
||+++|+||+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++++.. ||||++|++|++++.|+|+++..++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999998887764 36899999999999876 99999999999999999999998776
Q ss_pred ChHH
Q 000351 1466 SSFS 1469 (1623)
Q Consensus 1466 ~~f~ 1469 (1623)
..|.
T Consensus 243 ~~~~ 246 (377)
T PRK11607 243 TRYS 246 (377)
T ss_pred cHHH
Confidence 5544
No 229
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.1e-39 Score=369.09 Aligned_cols=217 Identities=26% Similarity=0.446 Sum_probs=182.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC--ChHHhhhce
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF--GLMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i--~~~~lR~~i 1316 (1623)
|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 789999999964 3699999999999999999999999999999999999999999999999999764 335678899
Q ss_pred EEEcCCCcccc-ccHHhhcCCCC----CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhh
Q 000351 1317 GIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1391 (1623)
Q Consensus 1317 ~~vpQdp~Lf~-gTIr~NLd~~~----~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL 1391 (1623)
+|+||++.+|. .|+++|+.... ..+..+..+ .+.+.++. .|++.........||||||||++||||++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~--~gl~~~~~~~~~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAK--VGLAERAHHYPSELSGGQQQRVAIARALA 152 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHH--cCChHHHhcChhhcCHHHHHHHHHHHHHh
Confidence 99999999886 59999996421 112211111 12233333 25555555556789999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1392 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1392 ~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 9999999999999999999999999998865 47999999999999976 9999999999999999999987543
No 230
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-39 Score=371.53 Aligned_cols=218 Identities=21% Similarity=0.398 Sum_probs=187.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 48999999999643 69999999999999999999999999999999999986 479999999999853 4556
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCCC---C---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~---~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
.+|++++|+||++.+|+.|+++|+..... . .++++.++++.+++.+.+. ........+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHHH
Confidence 77889999999999998899999974211 1 1234555667777655443 223455678999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEe---------CceEeee
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD---------SGRVLEY 1454 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~ive~ 1454 (1623)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988777899999999999876 99999998 8999999
Q ss_pred cChhHHhhcC
Q 000351 1455 DTPEELLSNE 1464 (1623)
Q Consensus 1455 Gtp~eLl~~~ 1464 (1623)
|+++++.+++
T Consensus 241 ~~~~~~~~~~ 250 (264)
T PRK14243 241 DRTEKIFNSP 250 (264)
T ss_pred CCHHHHHhCC
Confidence 9999998654
No 231
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.7e-39 Score=364.73 Aligned_cols=202 Identities=22% Similarity=0.372 Sum_probs=172.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 5789999999653 699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EcCCCcccc-ccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+|. .|+++|+.... .... +++.++++..++.++ .......||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHHH
Confidence 999999885 59999996421 1222 234444555554433 3444467999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999865 37899999999999877 9999999999999876
No 232
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-39 Score=381.74 Aligned_cols=224 Identities=21% Similarity=0.388 Sum_probs=184.7
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc----CCCcEEEECCEecCCCChHHh
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE----LERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~----p~~G~I~IdG~di~~i~~~~l 1312 (1623)
|+++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 89999999996532 259999999999999999999999999999999999997 489999999999999887766
Q ss_pred hh----ceEEEcCCCc--cccc-cHHhhc----CCCCCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCC
Q 000351 1313 RK----ILGIIPQSPV--LFSG-TVRFNL----DPFSEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1377 (1623)
Q Consensus 1313 R~----~i~~vpQdp~--Lf~g-TIr~NL----d~~~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LS 1377 (1623)
|+ +|+||||+|. +++. |+.+|+ ....... ++++.++|+.+++.+.. .........||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 54 6999999995 4432 666554 2221112 23456666666664311 22344556899
Q ss_pred hhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeee
Q 000351 1378 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1378 gGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1454 (1623)
||||||++|||||+.+|+|||+||||++||+.+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||.+|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999965 999999999999999
Q ss_pred cChhHHhhcCCChHHH
Q 000351 1455 DTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1455 Gtp~eLl~~~~~~f~~ 1470 (1623)
|+++++.+++...|.+
T Consensus 236 g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQ 251 (326)
T ss_pred CCHHHHhhCCCChHHH
Confidence 9999999876555544
No 233
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-39 Score=376.23 Aligned_cols=215 Identities=25% Similarity=0.413 Sum_probs=185.8
Q ss_pred cEEEEEEEEEeCCC----CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC-hHHh
Q 000351 1238 SIKFEDVVLRYRPE----LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDL 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~-~~~l 1312 (1623)
-|+++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999642 246999999999999999999999999999999999999999999999999997654 3567
Q ss_pred hhceEEEcCCCc--cccccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1313 RKILGIIPQSPV--LFSGTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1313 R~~i~~vpQdp~--Lf~gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
|++++|+||+|. +|..|+.+|+.+.. ..+ ++++.++++.+++.++..+. ...||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHA-----------PHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHH
Confidence 889999999984 67679999996431 112 34466667776666555443 35799999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..|||+++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 378999999999999889999999999999999999997
Q ss_pred hc
Q 000351 1462 SN 1463 (1623)
Q Consensus 1462 ~~ 1463 (1623)
++
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 234
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-39 Score=373.46 Aligned_cols=220 Identities=26% Similarity=0.423 Sum_probs=188.2
Q ss_pred CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--CC
Q 000351 1236 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FG 1308 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i~ 1308 (1623)
.+.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 446999999999964 3699999999999999999999999999999999999884 89999999999875 34
Q ss_pred hHHhhhceEEEcCCCccccccHHhhcCCC---CC-CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhH
Q 000351 1309 LMDLRKILGIIPQSPVLFSGTVRFNLDPF---SE-HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1309 ~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~---~~-~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQ 1380 (1623)
...+|++++|+||++.+|++|+++|+... .. .. ++++.++++.+++.+.+. +..+..+.+|||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHHH
Confidence 56778999999999999989999999632 11 11 233556666666544332 23455667899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
|||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999876 99999999999999999999
Q ss_pred HhhcC
Q 000351 1460 LLSNE 1464 (1623)
Q Consensus 1460 Ll~~~ 1464 (1623)
+.+++
T Consensus 254 ~~~~~ 258 (272)
T PRK14236 254 LFTSP 258 (272)
T ss_pred HhcCC
Confidence 87543
No 235
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=375.45 Aligned_cols=215 Identities=25% Similarity=0.445 Sum_probs=184.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++..+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999754346999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCCc-cc-cccHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1318 IIPQSPV-LF-SGTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1318 ~vpQdp~-Lf-~gTIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
|+||+|. +| ..|+++|+.... ... ++++.++++..++.+ .......+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLE-----------RADYEPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCCcccCCHHHHHHHHHHH
Confidence 9999994 44 558999985321 112 223445555554433 333445689999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeeecChhHHhhc
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|++.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++..+
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 7899999999999988999999999999999999998753
No 236
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-39 Score=356.33 Aligned_cols=202 Identities=32% Similarity=0.522 Sum_probs=171.5
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc----------CcEE
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR----------GTVA 682 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~----------~~ia 682 (1623)
..|+++|++++|++ . ++|+||||++++|++++|+||||||||||+|+|+|.++|.+| .+.+. .+||
T Consensus 3 ~~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G-~i~~~g~~~~~~~~~~~Ig 78 (254)
T COG1121 3 PMIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSG-EIKIFGKPVRKRRKRLRIG 78 (254)
T ss_pred cEEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcc-eEEEccccccccccCCeEE
Confidence 46999999999974 2 699999999999999999999999999999999999999999 44432 3699
Q ss_pred EEccCc---ccCcccHHHHHhcCCCC-----------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 683 YVPQVS---WIFNATVRDNILFGSAF-----------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 683 y~~Q~~---~l~~~Tv~enI~~g~~~-----------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
||||.. |-|..||+|-+..|... |.+...++++..++.+..+. .| .+|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i----~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QI----GELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------cc----cccCcHHHHH
Confidence 999964 55889999999987422 34778888999988754432 23 4699999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
|-|||||.++||+++|||||+|+|+.++..+++.+.....+|+||++||||++.+. .+|+|+.|+ +++...|++++..
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 99999999999999999999999999999999865554555999999999999875 589999985 5678899999887
Q ss_pred hcC
Q 000351 828 NNG 830 (1623)
Q Consensus 828 ~~~ 830 (1623)
+..
T Consensus 227 ~~~ 229 (254)
T COG1121 227 TEE 229 (254)
T ss_pred CHH
Confidence 543
No 237
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.5e-39 Score=372.26 Aligned_cols=214 Identities=28% Similarity=0.454 Sum_probs=180.4
Q ss_pred EEEEEEEEEeCCC-------CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH
Q 000351 1239 IKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~ 1311 (1623)
|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 246999999999999999999999999999999999999999999999999998876543
Q ss_pred ---hhhceEEEcCCCc--cc-cccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCC
Q 000351 1312 ---LRKILGIIPQSPV--LF-SGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENF 1376 (1623)
Q Consensus 1312 ---lR~~i~~vpQdp~--Lf-~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~L 1376 (1623)
+|++++|+||+|. ++ ..|+++|+... .... ++++.++++.. |++ .........|
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~~L 151 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMV-----------GLRSEDADKLPRQL 151 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCChhhhhCChhhC
Confidence 6778999999983 44 36999998521 1111 22334444443 443 2344556789
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
|||||||++|||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||++++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999998753 7899999999999976 99999999999999
Q ss_pred ecChhHHhhc
Q 000351 1454 YDTPEELLSN 1463 (1623)
Q Consensus 1454 ~Gtp~eLl~~ 1463 (1623)
.|+++++...
T Consensus 232 ~g~~~~~~~~ 241 (265)
T TIGR02769 232 ECDVAQLLSF 241 (265)
T ss_pred ECCHHHHcCC
Confidence 9999999864
No 238
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.7e-39 Score=384.92 Aligned_cols=212 Identities=29% Similarity=0.474 Sum_probs=181.8
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++. .+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+ ...|++||
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 59999999999643 6999999999999999999999999999999999999999999999999997654 56788999
Q ss_pred EEcCCCcccc-ccHHhhcCCCC---CCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFS-GTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~-gTIr~NLd~~~---~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
|+||++.++. .|+++|+..+. ..+..+ +.++++.+ |++........+||||||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~-----------~L~~~~~~~~~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFA-----------RLESKADARVSDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCchhhCCChhhCCHHHHHHHHHHHH
Confidence 9999999874 59999997432 122222 22333333 33333344445799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|+.+|++|||||||++||+.+.+.+++.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999875 47999999999999977 999999999999999999999764
No 239
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=369.44 Aligned_cols=215 Identities=25% Similarity=0.364 Sum_probs=179.9
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecC------CCChHHh
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA------KFGLMDL 1312 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~------~i~~~~l 1312 (1623)
|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999964 36999999999999999999999999999999999999999999999999874 1234567
Q ss_pred hhceEEEcCCCccccc-cHHhhcCCC----CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1313 RKILGIIPQSPVLFSG-TVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~g-TIr~NLd~~----~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
|++++|+||+|.+|.+ |+++|+... .....++.. ..+.++++.+ |++........+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la 153 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIA 153 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHH
Confidence 8899999999999976 999999621 111222111 1123333332 455555555678999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
||++++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 154 ral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 154 RALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 99999999999999999999999999999999865 47999999999999976 99999999999999999998754
No 240
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-39 Score=372.39 Aligned_cols=219 Identities=26% Similarity=0.401 Sum_probs=187.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 7 AIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred eEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 5999999999964 3699999999999999999999999999999999999985 48999999999864 3456
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||++.+|+.|+++|+... +... ++.+.++++.+++.+.+. ......+..|||||||
T Consensus 85 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 157 (259)
T PRK14260 85 RLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVK-------DKLNKSALGLSGGQQQ 157 (259)
T ss_pred hhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHHHH
Confidence 678899999999999999999999631 1112 233556677777654433 2234456689999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEe-----CceEeeecC
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD-----SGRVLEYDT 1456 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-----~G~ive~Gt 1456 (1623)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||++++|+ +|++++.|+
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~ 237 (259)
T PRK14260 158 RLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGV 237 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCC
Confidence 999999999999999999999999999999999999988777999999999999977 99999998 599999999
Q ss_pred hhHHhhcCC
Q 000351 1457 PEELLSNEG 1465 (1623)
Q Consensus 1457 p~eLl~~~~ 1465 (1623)
++++.+++.
T Consensus 238 ~~~~~~~~~ 246 (259)
T PRK14260 238 TTQIFSNPL 246 (259)
T ss_pred HHHHhcCCC
Confidence 999976543
No 241
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=372.60 Aligned_cols=211 Identities=25% Similarity=0.445 Sum_probs=184.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EcCCCccccc-cHHhhcCCCC--------CC---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHH
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS--------EH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1386 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~--------~~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaL 1386 (1623)
+||++.++.+ |+++|++... .. .++++.++++..++.+. .......||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHHH
Confidence 9999998877 9999997421 11 12335555665555433 333456799999999999
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1387 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1387 ARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998865 47899999999999876 99999999999999999998864
No 242
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-39 Score=370.10 Aligned_cols=220 Identities=23% Similarity=0.409 Sum_probs=189.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCCC--ChHH
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~i--~~~~ 1311 (1623)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.+++.. +...
T Consensus 4 l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 4 IEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 789999999964 369999999999999999999999999999999999875 3899999999998753 4567
Q ss_pred hhhceEEEcCCCccccccHHhhcCCC-C--C-CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPF-S--E-HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~-~--~-~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
+|++++|+||+|.+|.+|+++|+... . . .+ ++.+.++++.+++.+.+.. .++..+.+||+|||||
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~qr 154 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQQR 154 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHHHH
Confidence 88999999999999999999999632 1 1 11 2335666777777655432 2345567899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14266 155 LCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFI 234 (250)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988778999999999999887 99999999999999999999976
Q ss_pred cCCCh
Q 000351 1463 NEGSS 1467 (1623)
Q Consensus 1463 ~~~~~ 1467 (1623)
.+...
T Consensus 235 ~~~~~ 239 (250)
T PRK14266 235 NPKDK 239 (250)
T ss_pred CCCCh
Confidence 65443
No 243
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.1e-39 Score=380.14 Aligned_cols=211 Identities=24% Similarity=0.414 Sum_probs=184.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+ +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 899999999964 369999999999999999999999999999999999999999999999999977 45678899999
Q ss_pred EcCCCccccc-cHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||+|.+|.+ |+++||..+. .... +++.++++.. |++........+||||||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELV-----------GLRPEQHKKIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC-----------CCchHhcCchhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996422 1122 2233333333 455555556678999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
+++|++|||||||++||+.+.+.+++.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998778999999999999987 999999999999999999998764
No 244
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-39 Score=368.47 Aligned_cols=211 Identities=28% Similarity=0.435 Sum_probs=179.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH-hhhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~-lR~~i~ 1317 (1623)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 5789999999743 6999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEcCCCccccc-cHHhhcCCCC-C--CCHHH-HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS-E--HSDAD-LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~-~--~sd~~-i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|+||++.+|.. |+++|+.... . ..+++ ..++++..+ +++........+||||||||++||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999986 9999996321 1 11111 222222222 23334455566899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998753 7899999999999986 9999999999999999999873
No 245
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-39 Score=367.62 Aligned_cols=217 Identities=28% Similarity=0.411 Sum_probs=180.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH-hhhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~-lR~~i 1316 (1623)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.+.+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 3899999999964 36999999999999999999999999999999999999999999999999998887654 57789
Q ss_pred EEEcCCCccccc-cHHhhcCCCCC-CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~~-~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
+|+||++.+|.+ |+++|+..... ...++..+.+ .+.++.++ +++.........||||||||++||||++++|
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQP 156 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999999999985 99999964211 1122222111 12222221 1222233345679999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|++++.|+++++..
T Consensus 157 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 157 RLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999999999864 47999999999998766 99999999999999999999864
No 246
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=358.93 Aligned_cols=217 Identities=28% Similarity=0.437 Sum_probs=190.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCE---ecCCCChHHhhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF---DIAKFGLMDLRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~---di~~i~~~~lR~ 1314 (1623)
.|+++|+++.|+.- ++++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++++ .-.+
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~R 77 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRDR 77 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhhc
Confidence 37889999999654 6999999999999999999999999999999999999999999999999 777633 3345
Q ss_pred ceEEEcCCCccccc-cHHhhcCCCC---------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDPFS---------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~~~---------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
+||+|.|+..||.. ||++||.+.- ...+.++.+.|+.++|..+-++.| ..||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 79999999999965 9999997543 123455667788888777666665 47999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
||||||.-+|++|+||||.++||+.-.+.+++-|++... +.|+++|||+.+++.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999999999999998653 7899999999999877 9999999999999999999999
Q ss_pred hcCCChHH
Q 000351 1462 SNEGSSFS 1469 (1623)
Q Consensus 1462 ~~~~~~f~ 1469 (1623)
..+++.|-
T Consensus 227 ~~P~s~fV 234 (345)
T COG1118 227 DHPASRFV 234 (345)
T ss_pred cCCCccce
Confidence 88877663
No 247
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.7e-39 Score=363.62 Aligned_cols=203 Identities=29% Similarity=0.436 Sum_probs=172.1
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh---h
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL---R 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l---R 1313 (1623)
|+++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++.... |
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 369999999999999999999999999999999999999999999999999988776543 4
Q ss_pred -hceEEEcCCCcccc-ccHHhhcCCC---CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1314 -KILGIIPQSPVLFS-GTVRFNLDPF---SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1314 -~~i~~vpQdp~Lf~-gTIr~NLd~~---~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
++++|+||++.+|. .|+++|+... ..... +++.++++.. |++.........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKV-----------GLEHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHH
Confidence 67999999999986 5999999641 11221 2233344443 454444555568999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhccCEEEEEeCceEe
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVL 1452 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~iv 1452 (1623)
+||||++++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999864 378999999999999889999999999986
No 248
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-39 Score=369.31 Aligned_cols=218 Identities=24% Similarity=0.397 Sum_probs=186.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i--~~~ 1310 (1623)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 4899999999964 3699999999999999999999999999999999999875 799999999999653 345
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCC---CC-C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~-s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
..|++++|+||++.+|+.|+++|+.... .. + ++++.++++.+++.+.+. .........|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHHH
Confidence 6788999999999999999999997421 11 1 223455666665533222 2344456789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988777999999999999877 9999999999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 543
No 249
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-39 Score=368.68 Aligned_cols=215 Identities=26% Similarity=0.431 Sum_probs=183.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH-hhhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~-lR~~i~ 1317 (1623)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+... .|++++
T Consensus 4 l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 4 LTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred EEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 899999999964 36999999999999999999999999999999999999999999999999998877644 578899
Q ss_pred EEcCCCccccc-cHHhhcCCCCC----CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~----~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|+||++.+|.+ |+++|+..... .+.++. ...+.+.++.+ |++.........||||||||++||||+++
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 154 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAA 154 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhc
Confidence 99999998875 99999975321 111111 12233444443 56555666677899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 155 NPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999998764 47899999999988866 99999999999999999999864
No 250
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-39 Score=373.64 Aligned_cols=213 Identities=22% Similarity=0.375 Sum_probs=185.5
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
-.|+++||+++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 35999999999974 3699999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEcCCCcccc-ccHHhhcCCCC--C------C---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1317 GIIPQSPVLFS-GTVRFNLDPFS--E------H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1317 ~~vpQdp~Lf~-gTIr~NLd~~~--~------~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
+|+||++.+|. .|+++|+.... . . .++.+.++++..++.++ .......||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHHH
Confidence 99999998875 59999996421 1 1 12345556666555443 3344568999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999876 9999999999999999999876
Q ss_pred h
Q 000351 1462 S 1462 (1623)
Q Consensus 1462 ~ 1462 (1623)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 4
No 251
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=373.59 Aligned_cols=219 Identities=26% Similarity=0.439 Sum_probs=185.9
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCC--CCh
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 1309 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~--i~~ 1309 (1623)
..|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGDE--QALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECCE--eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 358999999999643 69999999999999999999999999999999999997 689999999999864 345
Q ss_pred HHhhhceEEEcCCCccccccHHhhcCCCC---CC---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1310 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1310 ~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
..+|++++|+||++.+|.+|+++|+.... .. .++++.++++..++...+. ........+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHHH
Confidence 56788999999999999889999996321 11 2344566666665533221 23345567899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEE-EEeCceEeeecChhHHh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRIL-LLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~-Vl~~G~ive~Gtp~eLl 1461 (1623)
++|||||+++|+||||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. |||++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998777899999999999877 99976 56999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
++.
T Consensus 269 ~~~ 271 (285)
T PRK14254 269 ENP 271 (285)
T ss_pred hCc
Confidence 644
No 252
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4e-39 Score=377.29 Aligned_cols=213 Identities=33% Similarity=0.578 Sum_probs=188.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|+.+ ..+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47899999999732 3799999999999999999999999999999999999999999999999998775 778999999
Q ss_pred EEcCCCccccc-cHHhhcCCCCC-------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~-------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
|+||+|.+++. |++|||+++.. ..++.+.+.++..+|.+.- ......||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHHH
Confidence 99999998876 99999985431 2245677788887765421 22345799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC-C-cEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-S-CTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~-~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||+++||.++.+.. ||||++|++|+++..|+++++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999875 4 699999999999988 999999999999999999998754
No 253
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-39 Score=369.59 Aligned_cols=218 Identities=24% Similarity=0.416 Sum_probs=186.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i--~~~ 1310 (1623)
.|+++|++++|++ +++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 4899999999964 3699999999999999999999999999999999999763 489999999999876 456
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCCC----CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFSE----HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~----~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
..|+.++|+||+|.+|++|+++|+..... .. ++.+.++++.+++.+. +.+..+..+.+|||||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-------VKDRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-------hHHHhhcChhhCCHHHHH
Confidence 77889999999999999999999974211 11 2234555555554332 223355667789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++.+|+++||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999976 9999999999999999999987
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
.++
T Consensus 237 ~~~ 239 (253)
T PRK14261 237 ENP 239 (253)
T ss_pred hCC
Confidence 654
No 254
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-39 Score=365.87 Aligned_cols=204 Identities=25% Similarity=0.329 Sum_probs=173.0
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhce
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i 1316 (1623)
|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 369999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEcCCCcccc-ccHHhhcCCCC---CC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSPVLFS-GTVRFNLDPFS---EH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp~Lf~-gTIr~NLd~~~---~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+|+||+|.+|+ .|+++|+.... .. .++++.++++..++.+.. .....+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFE-----------NAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHHHHHHHHHH
Confidence 99999999987 59999996321 11 123455555555554433 3334579999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEe--CceEeeecChh
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 1458 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~ive~Gtp~ 1458 (1623)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|+ +|++++.++.+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9999999999999999999999999999999864 37899999999998876 99999999 79999988753
No 255
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=371.61 Aligned_cols=222 Identities=22% Similarity=0.360 Sum_probs=190.1
Q ss_pred CCCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecC---
Q 000351 1234 PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA--- 1305 (1623)
Q Consensus 1234 p~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~--- 1305 (1623)
|..+.|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 556789999999999643 699999999999999999999999999999999999975 7999999998874
Q ss_pred -CCChHHhhhceEEEcCCCccccccHHhhcCCCC---C-----CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCC
Q 000351 1306 -KFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---E-----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1306 -~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~-----~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~L 1376 (1623)
......+|++++|+||++.+|.+|+++|+.... . ..++++.++++.+++.+. +....+.....|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDE-------VKDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchh-------hhHHHhCCcccC
Confidence 234456788999999999999999999996321 1 123456666766665432 233445566789
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
|||||||++|||||+++|+||||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988777899999999999976 9999999999999999
Q ss_pred ChhHHhhcC
Q 000351 1456 TPEELLSNE 1464 (1623)
Q Consensus 1456 tp~eLl~~~ 1464 (1623)
+++++..+.
T Consensus 243 ~~~~~~~~~ 251 (265)
T PRK14252 243 ATDTIFIKP 251 (265)
T ss_pred CHHHHHhCC
Confidence 999987543
No 256
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.6e-39 Score=363.11 Aligned_cols=200 Identities=29% Similarity=0.462 Sum_probs=170.7
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEE
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 1319 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~v 1319 (1623)
+++|++++|+++..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999965223699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred cCCCc--cccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1320 PQSPV--LFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1320 pQdp~--Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
||+|. ++..|+++|+.... ..++ +++.+.++..++ +.........||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGL-----------EGLRDRSPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCHHHHHHHHHHHHH
Confidence 99983 66789999996421 1122 233444444444 3334444568999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCce
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGR 1450 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1450 (1623)
+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999999875 37899999999999988 99999999985
No 257
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6e-39 Score=359.29 Aligned_cols=201 Identities=30% Similarity=0.510 Sum_probs=174.3
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC-------------c
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG-------------T 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~-------------~ 680 (1623)
.++++|++|+|+ ++++++|+||++++|++++|+||||||||||||+|+|.++|.+| .+.+.+ .
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G-~V~l~g~~i~~~~~kelAk~ 77 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSG-EVLLDGKDIASLSPKELAKK 77 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCC-EEEECCCchhhcCHHHHhhh
Confidence 478999999997 47899999999999999999999999999999999999999999 555543 6
Q ss_pred EEEEccCccc-CcccHHHHHhcCCC-C----------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 681 VAYVPQVSWI-FNATVRDNILFGSA-F----------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 681 iay~~Q~~~l-~~~Tv~enI~~g~~-~----------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+||+||++.. +.-||+|-+.+|+. + |.+...++++.+++.+..+.. ..+||||||||
T Consensus 78 ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQr 146 (258)
T COG1120 78 LAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQR 146 (258)
T ss_pred EEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHH
Confidence 9999999866 57899999999842 1 333566678888887655432 24799999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHH
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l 826 (1623)
|.|||||+++|+|++||||||+||....-.+++.+.+.. .+|+|+|+|+||+++. ..||++++|++|+++.+|+++|+
T Consensus 147 v~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ev 226 (258)
T COG1120 147 VLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEV 226 (258)
T ss_pred HHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchh
Confidence 999999999999999999999999999999998766644 4599999999999875 67999999999999999999988
Q ss_pred hhc
Q 000351 827 SNN 829 (1623)
Q Consensus 827 ~~~ 829 (1623)
+..
T Consensus 227 lT~ 229 (258)
T COG1120 227 LTE 229 (258)
T ss_pred cCH
Confidence 754
No 258
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=373.68 Aligned_cols=218 Identities=22% Similarity=0.370 Sum_probs=182.0
Q ss_pred EEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC----ChHH
Q 000351 1239 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i----~~~~ 1311 (1623)
|+++||+++|+... .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 88999999996421 3699999999999999999999999999999999999999999999999998764 3467
Q ss_pred hhhceEEEcCCC--ccccccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhHHHHHH
Q 000351 1312 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1312 lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQrQrLa 1385 (1623)
+|++|+|+||+| .+|+.|+++|+.... ..+.++..+. +.+.++. .|++ .........||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~--~~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLAL--VGISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHH--cCCChhhhhCCcccCCHHHHHHHH
Confidence 888999999998 578889999996321 1233322211 1223332 2444 2345556789999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999865 37899999999999876 999999999999999999998753
No 259
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=368.77 Aligned_cols=211 Identities=27% Similarity=0.425 Sum_probs=183.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...++++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EcCCCcc-ccccHHhhcCCCCC---C----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVL-FSGTVRFNLDPFSE---H----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~L-f~gTIr~NLd~~~~---~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+ +..|+++|+..... . .++.+.++++..++.+. .......||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHL-----------AGRDYPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhH-----------hcCCcccCCHHHHHHHHHHHHH
Confidence 9999987 56799999964211 1 12335555665555443 3334568999999999999999
Q ss_pred h------cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1391 L------RRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1391 L------~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+ .+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999999865 47899999999999875 9999999999999999999886
Q ss_pred h
Q 000351 1462 S 1462 (1623)
Q Consensus 1462 ~ 1462 (1623)
.
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 4
No 260
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.2e-39 Score=363.38 Aligned_cols=200 Identities=26% Similarity=0.388 Sum_probs=172.7
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH---Hhhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~---~lR~~ 1315 (1623)
|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++..++.. .+|+.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999533 3699999999999999999999999999999999999999999999999999887643 46788
Q ss_pred eEEEcCCCcccc-ccHHhhcCCCC---CC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFS-GTVRFNLDPFS---EH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~-gTIr~NLd~~~---~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
++|+||+|.+|. .|+++|+.... .. .++++.++++..++.+...+. ..+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAF-----------PEQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHHH
Confidence 999999999986 59999996421 11 234566677776665544333 357999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCce
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGR 1450 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1450 (1623)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999987 99999999985
No 261
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-39 Score=376.07 Aligned_cols=214 Identities=27% Similarity=0.463 Sum_probs=180.6
Q ss_pred cEEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC----ChH
Q 000351 1238 SIKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i----~~~ 1310 (1623)
.|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996421 3699999999999999999999999999999999999999999999999998653 245
Q ss_pred HhhhceEEEcCCC--ccccccHHhhcCCC---CCCCHHH----HHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhH
Q 000351 1311 DLRKILGIIPQSP--VLFSGTVRFNLDPF---SEHSDAD----LWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp--~Lf~gTIr~NLd~~---~~~sd~~----i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQ 1380 (1623)
..|+.++|+||+| .+|..|+++|+... ...+.++ +.++++.+ |++ ........+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKV-----------GLSEDLISKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CCChhHhhCCcccCCHHH
Confidence 6778899999998 57788999999631 1122222 23333333 444 23445567899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChh
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 1458 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~ 1458 (1623)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999874 47899999999999876 9999999999999999999
Q ss_pred HHhh
Q 000351 1459 ELLS 1462 (1623)
Q Consensus 1459 eLl~ 1462 (1623)
++.+
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 9875
No 262
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.5e-39 Score=362.46 Aligned_cols=201 Identities=24% Similarity=0.351 Sum_probs=171.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh---HHhhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~---~~lR~~ 1315 (1623)
|+++|++++|+.+ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987654 346788
Q ss_pred eEEEcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
++|+||+|.+|.. |+++|+.... ..+ ++++.++++..++.+.. .....+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHHH
Confidence 9999999999975 9999996421 112 23355555655554433 333457999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceE
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1451 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1451 (1623)
|||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 57999999999999987 999999999975
No 263
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=367.74 Aligned_cols=203 Identities=29% Similarity=0.394 Sum_probs=176.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 4999999999964 36999999999999999999999999999999999999999999999998763 4678899
Q ss_pred EEcCCCcccc-ccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1318 IIPQSPVLFS-GTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1318 ~vpQdp~Lf~-gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
|+||++.+|+ .|+++|+.... ...++++.++++..++.+. ......+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 59999997431 1224456666666655443 334456899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChh
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 1458 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~ 1458 (1623)
+|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998864 37899999999999866 9999999999999988765
No 264
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-39 Score=366.05 Aligned_cols=210 Identities=27% Similarity=0.401 Sum_probs=181.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+.. ++++|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 5789999999743 69999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EcCCCccccc-cHHhhcCCCC---CC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS---EH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~---~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+|.+ |+++|+.... .. .++++.++++..++.++.. ....+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYAN-----------RKPSQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996311 11 1234555555555544443 34468999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
+++|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999999998653 7999999999999876 999999999999999999988754
No 265
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.7e-38 Score=365.04 Aligned_cols=238 Identities=34% Similarity=0.626 Sum_probs=202.7
Q ss_pred HHHHHhcccccccCCCCCCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC
Q 000351 590 RMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP 669 (1623)
Q Consensus 590 RI~~fL~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~ 669 (1623)
.+.+.|..+...+. ..+.....+.|+++|+++.+ +++|+|+||+|++|++++|+|+||||||||+++|+|.++|
T Consensus 16 ~~~~~~~~~~~~~~-~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p 89 (282)
T cd03291 16 GFGELLEKAKQENN-DRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEP 89 (282)
T ss_pred HHHHHHhccccccc-ccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 44555555433221 11223345679999999952 4699999999999999999999999999999999999999
Q ss_pred CCCCeEEEcCcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 670 VSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 670 ~~g~~~~~~~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
++| .+.+.+.|+|++|++++++.|++||+.++....+.++...++.+++.+.++.++.+.++.+++.+.+||||||||+
T Consensus 90 ~~G-~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv 168 (282)
T cd03291 90 SEG-KIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARI 168 (282)
T ss_pred CCc-EEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHH
Confidence 999 7788889999999999998999999998755555566777888899888999999988889999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
+||||++++|+++||||||++||+.+.+.+.+.++....+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 169 ~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 169 SLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred HHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999987666544568999999999999988999999999999999999998765
Q ss_pred ChhHH
Q 000351 830 GELFQ 834 (1623)
Q Consensus 830 ~~~~~ 834 (1623)
...+.
T Consensus 249 ~~~~~ 253 (282)
T cd03291 249 RPDFS 253 (282)
T ss_pred chHHH
Confidence 43333
No 266
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-39 Score=373.05 Aligned_cols=212 Identities=26% Similarity=0.432 Sum_probs=180.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecC--CCChHHhhhce
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA--KFGLMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~--~i~~~~lR~~i 1316 (1623)
|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999964 36999999999999999999999999999999999999999999999999985 33445778899
Q ss_pred EEEcCCCc--cccccHHhhcCCC---CCCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSPV--LFSGTVRFNLDPF---SEHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp~--Lf~gTIr~NLd~~---~~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+|+||+|. ++..|+.+|+... ...+++ ++.++++..++.++ ......+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHF-----------RHQPIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhH-----------hcCCchhCCHHHHHHHHHH
Confidence 99999985 5677899998642 112222 23445555555433 2334567999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999864 47899999999999966 999999999999999999998753
No 267
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=369.64 Aligned_cols=218 Identities=27% Similarity=0.460 Sum_probs=184.0
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 48999999999643 699999999999999999999999999999999999974 69999999999853 4456
Q ss_pred HhhhceEEEcCCCccccc-cHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1311 DLRKILGIIPQSPVLFSG-TVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~g-TIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
.+|+.++++||++.+|.. |+++|+... ...+ ++.+.++++..++.+.+ +........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHHH
Confidence 788899999999999974 999999631 1111 23345556666553322 2234455678999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEe------CceEeee
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD------SGRVLEY 1454 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~------~G~ive~ 1454 (1623)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999876 99999997 8999999
Q ss_pred cChhHHhhcC
Q 000351 1455 DTPEELLSNE 1464 (1623)
Q Consensus 1455 Gtp~eLl~~~ 1464 (1623)
|++++++.++
T Consensus 235 ~~~~~~~~~~ 244 (258)
T PRK14241 235 DDTEKIFSNP 244 (258)
T ss_pred CCHHHHHhCc
Confidence 9999987643
No 268
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=369.77 Aligned_cols=218 Identities=28% Similarity=0.428 Sum_probs=185.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCCC-hHH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG-LMD 1311 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i~-~~~ 1311 (1623)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999964 3799999999999999999999999999999999999986 6999999999997653 456
Q ss_pred hhhceEEEcCCCccccccHHhhcCCC----CCCCHHHHH----HHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPF----SEHSDADLW----EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~sd~~i~----~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
+|++++|+||+|.+|+.|+++|+... ...++++.. +.++..++.+. +++.+.....+||||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDA-------VKDRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhCCcccCCHHHHHH
Confidence 78899999999999999999999732 112343332 23333333221 2234456677899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999986
Q ss_pred cC
Q 000351 1463 NE 1464 (1623)
Q Consensus 1463 ~~ 1464 (1623)
.+
T Consensus 252 ~~ 253 (276)
T PRK14271 252 SP 253 (276)
T ss_pred Cc
Confidence 54
No 269
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-39 Score=376.42 Aligned_cols=221 Identities=22% Similarity=0.395 Sum_probs=181.9
Q ss_pred CccEEEEEEEEEeCCCC---CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC----C-
Q 000351 1236 SGSIKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----F- 1307 (1623)
Q Consensus 1236 ~g~I~~~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~----i- 1307 (1623)
.|.|+++|++++|+... .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999996432 259999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHhhhceEEEcCCC--ccccccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhHH
Q 000351 1308 GLMDLRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1308 ~~~~lR~~i~~vpQdp--~Lf~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQr 1381 (1623)
+...+|++++|+||+| .+|..|+++|+.+.. ....++..+. +.+.++. .|+. .........||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~--~~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKL--VQLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHH--cCCChhHhcCChhhCCHHHH
Confidence 3566788999999998 467889999996421 1222222211 1122222 2442 234455678999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChh
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 1458 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~ 1458 (1623)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998753 7899999999999866 9999999999999999999
Q ss_pred HHhhc
Q 000351 1459 ELLSN 1463 (1623)
Q Consensus 1459 eLl~~ 1463 (1623)
++...
T Consensus 237 ~~~~~ 241 (289)
T PRK13645 237 EIFSN 241 (289)
T ss_pred HHhcC
Confidence 98753
No 270
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-38 Score=341.68 Aligned_cols=211 Identities=30% Similarity=0.510 Sum_probs=179.3
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE---------------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 676 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~--------------- 676 (1623)
.+.|++++++++|. ++.+++||||+|++||+++|+|||||||||||++|.|+++|++|....
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 46799999999996 478999999999999999999999999999999999999999994322
Q ss_pred EcCcEEEEccCcccC-cccHHHHHhcC----CCCCHHHHHH----HHHHhCchhH-HhcCCCCCcccccCCCCccChHHH
Q 000351 677 IRGTVAYVPQVSWIF-NATVRDNILFG----SAFEPARYEK----AIDVTSLQHD-LDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 677 ~~~~iay~~Q~~~l~-~~Tv~enI~~g----~~~~~~~~~~----~~~~~~l~~~-~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
++.++|+++|+--|| +.||+|||.|. ...+++.+++ -++.++|..+ .+.+|. +||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~Ps-----------ELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPS-----------ELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCch-----------hhcchHH
Confidence 234699999999999 67999999985 2344444433 3678999988 777774 8999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC--CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecCh
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS--GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 823 (1623)
+|+|||||+..||+++++|||||||||.+...+- .++..+.+ |.|+|+||||++.+.. ||||+++.||+|+.+|++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~~-~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVID-ELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHH-HHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 9999999999999999999999999999887664 56664433 8999999999998765 799999999999999999
Q ss_pred hHHhhcC-hhHHHhH
Q 000351 824 EDLSNNG-ELFQKLM 837 (1623)
Q Consensus 824 ~~l~~~~-~~~~~~~ 837 (1623)
+|+.+.. +..++++
T Consensus 231 ~el~~sd~P~v~qf~ 245 (263)
T COG1127 231 EELLASDDPWVRQFF 245 (263)
T ss_pred HHHHhCCCHHHHHHh
Confidence 9998764 4445544
No 271
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=366.44 Aligned_cols=217 Identities=26% Similarity=0.403 Sum_probs=185.5
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecC-CCChHH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA-KFGLMD 1311 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~-~i~~~~ 1311 (1623)
.++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999964 3699999999999999999999999999999999999986 5999999999986 445667
Q ss_pred hhhceEEEcCCCccccccHHhhcCCCC---CC-CH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1312 LRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~-sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
+|+.++|+||+|.+|..|+++|+.... .. .+ +++.++++.+++.+.+ ..........||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHHH
Confidence 888999999999999999999996321 11 11 2344455555554322 233455567899999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777999999999999887 99999999999999999999865
Q ss_pred c
Q 000351 1463 N 1463 (1623)
Q Consensus 1463 ~ 1463 (1623)
+
T Consensus 234 ~ 234 (249)
T PRK14253 234 N 234 (249)
T ss_pred C
Confidence 4
No 272
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.6e-38 Score=359.70 Aligned_cols=210 Identities=22% Similarity=0.334 Sum_probs=186.7
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh----HHhhhc
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL----MDLRKI 1315 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~----~~lR~~ 1315 (1623)
.+.|+.++|+++ .++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999755 479999999999999999999999999999999999999999999999998876542 245678
Q ss_pred eEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1316 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1316 i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
++|+||+|.+|+.|+++|+.......+++..++++..++.+.+..+|.|+++.++....+||||||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998654455667788889999999898899999998888888999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHH--HHHHHc-CCcEEEEeecCchhhhccCEEEEEeCce
Q 000351 1396 ILVLDEATAAVDVRTDALIQK--TIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGR 1450 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~--~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1450 (1623)
||||||||++||+.+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999988877 444432 3689999999999998899999999884
No 273
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.5e-38 Score=378.91 Aligned_cols=226 Identities=25% Similarity=0.408 Sum_probs=186.3
Q ss_pred cEEEEEEEEEeCC--CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC---CcEEEECCEecCCCChHHh
Q 000351 1238 SIKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE---RGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~---~G~I~IdG~di~~i~~~~l 1312 (1623)
.++++|++++|+. +..++|+||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.|+.+++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 4899999999953 2236999999999999999999999999999999999999996 9999999999999887766
Q ss_pred h----hceEEEcCCC--cccc-ccHHhhcC----CCCCCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCC
Q 000351 1313 R----KILGIIPQSP--VLFS-GTVRFNLD----PFSEHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1377 (1623)
Q Consensus 1313 R----~~i~~vpQdp--~Lf~-gTIr~NLd----~~~~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LS 1377 (1623)
| ++|+||||+| .+++ .|+.+|+. .+...+.+ .+.+.++.+++ +.+. ..++.....||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChH-HHhcCCcccCC
Confidence 4 4799999999 4554 37777663 22222322 23444444443 2111 22455667899
Q ss_pred hhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeee
Q 000351 1378 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1378 gGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1454 (1623)
||||||++|||||+.+|++||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988754 7899999999999976 999999999999999
Q ss_pred cChhHHhhcCCChHHHH
Q 000351 1455 DTPEELLSNEGSSFSKM 1471 (1623)
Q Consensus 1455 Gtp~eLl~~~~~~f~~l 1471 (1623)
|+++++.+++...|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 99999998766556543
No 274
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=9.1e-39 Score=364.35 Aligned_cols=211 Identities=25% Similarity=0.411 Sum_probs=173.3
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh---HHhh
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~---~~lR 1313 (1623)
|+++||+++|+... .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 269999999999999999999999999999999999999999999999999988764 5678
Q ss_pred hceEEEcCCC--ccc-cccHHhhcCC----CCCCCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhHHHHHH
Q 000351 1314 KILGIIPQSP--VLF-SGTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1314 ~~i~~vpQdp--~Lf-~gTIr~NLd~----~~~~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQrQrLa 1385 (1623)
++++|+||+| .++ ..|+++|+.. +....+++..+.. ..+.++.+ |++ ........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8999999999 344 4699999852 1111111111100 01233332 443 3455666789999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
||||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998754 7899999999999985 9999999999998765
No 275
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.5e-38 Score=364.29 Aligned_cols=210 Identities=26% Similarity=0.441 Sum_probs=180.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 5789999999743 69999999999999999999999999999999999999999999999999987653 4778999
Q ss_pred EcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||+|.+|++ |+++|+.... ..+ ++++.+++++.++.++ ......+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGL-----------GDRYPNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 111 2234444555444433 3334468999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
+++|+|+||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999998654 7899999999999876 999999999999999999999754
No 276
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.3e-38 Score=346.92 Aligned_cols=172 Identities=38% Similarity=0.671 Sum_probs=162.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997533469999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1398 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILl 1398 (1623)
++|+|.+|++|+++|+ ||||||||++||||++++|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEEeCceE
Q 000351 1399 LDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRV 1451 (1623)
Q Consensus 1399 LDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1451 (1623)
|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998865 47899999999999988999999999975
No 277
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=367.90 Aligned_cols=219 Identities=23% Similarity=0.337 Sum_probs=188.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCC--ChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i--~~~ 1310 (1623)
.+.+++.+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 8 ~~~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGNF--MAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 38999999999643 699999999999999999999999999999999999986 799999999998643 344
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCCC------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
.+|++++|+||++.+|..|+++|+..... ..++++.++++.+++.+.+.. ..++...+||||||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHHH
Confidence 67888999999999999999999974311 123456777777776544432 23455678999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEe--------CceEeeec
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD--------SGRVLEYD 1455 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~--------~G~ive~G 1455 (1623)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999998777899999999999876 99999996 89999999
Q ss_pred ChhHHhhcCC
Q 000351 1456 TPEELLSNEG 1465 (1623)
Q Consensus 1456 tp~eLl~~~~ 1465 (1623)
+++++.+++.
T Consensus 239 ~~~~~~~~~~ 248 (261)
T PRK14263 239 PTAQIFQNPR 248 (261)
T ss_pred CHHHHHhCCC
Confidence 9999986543
No 278
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=369.46 Aligned_cols=218 Identities=23% Similarity=0.418 Sum_probs=186.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 20 ~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 20 VFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred eEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 5999999999964 3699999999999999999999999999999999999864 58999999999864 3445
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCCC------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
.+|++++|+||++.+|+.|+++|+..... ..++++.++++.+++.+.+. .........||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQQRL 170 (274)
T ss_pred HHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHHHHH
Confidence 67889999999999998899999964211 12344556666666654332 223445578999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEe---------CceEeee
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD---------SGRVLEY 1454 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~ive~ 1454 (1623)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. |||+++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998778999999999999976 99999997 8999999
Q ss_pred cChhHHhhcC
Q 000351 1455 DTPEELLSNE 1464 (1623)
Q Consensus 1455 Gtp~eLl~~~ 1464 (1623)
|+++++..++
T Consensus 251 g~~~~~~~~~ 260 (274)
T PRK14265 251 SPTEQMFGSP 260 (274)
T ss_pred CCHHHHHhCC
Confidence 9999997654
No 279
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=362.91 Aligned_cols=498 Identities=19% Similarity=0.183 Sum_probs=325.2
Q ss_pred HHHHHHhhhhchhhhhcccCccC---CCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000351 927 LTETLRVSSSTWLSYWTDQSSLK---THGPL--FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAP 1001 (1623)
Q Consensus 927 ~~~~~~~~~~~wl~~w~~~~~~~---~~~~~--~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ap 1001 (1623)
+..++....++|+..|...-.+. .+... ..+.+|..++.+..++.....++-.....+--.-+-+.++++-+..-
T Consensus 54 ~~~l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~ 133 (604)
T COG4178 54 ALILLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR 133 (604)
T ss_pred HHHHHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34555677788888887543211 11122 24556777777777777777777777777777777778888877666
Q ss_pred ccccccCCch------hHHHHHhcccchhhhhhHHHHHHHHHHHHHHhhHhhHHHHH---------------HHHHHHHH
Q 000351 1002 MVFFHTNPLG------RIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIV---------------STMSLWAI 1060 (1623)
Q Consensus 1002 ~~ff~~~~~G------~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 1060 (1623)
.||.....| ..=+|+.+|+...-.........++.++.++++..++..-. ..++.+++
T Consensus 134 -~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~ 212 (604)
T COG4178 134 -RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAV 212 (604)
T ss_pred -chHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHH
Confidence 444433333 33467888877665544444444555544444333332211 11222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 1061 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 1140 (1623)
Q Consensus 1061 ~~l~~~~~~i~~~y~~~~r~l~~l~~~~~s~~~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1140 (1623)
+..++....+...+-+....+........+.+.....-.-+....|-.|+.|+.-.++..+..+.-.+.+......+.++
T Consensus 213 i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l 292 (604)
T COG4178 213 IIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRL 292 (604)
T ss_pred HHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111111111122222222222222233344444555566777888888877666666665555555444444444333
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CC
Q 000351 1141 AIRLEIVGGLMI--WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIE-LP 1217 (1623)
Q Consensus 1141 ~~~l~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~aveRi~~~~~-~~ 1217 (1623)
.......+-+.+ -.....-....+.++ .+-+..+..-...+...+++++..+..+.+-...+.|+.++.. +.
T Consensus 293 ~~~~~gy~~~s~v~P~li~ap~~f~g~i~-----~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~ 367 (604)
T COG4178 293 TWFQLGYGWLSVVLPILIAAPRYFSGQIT-----FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALE 367 (604)
T ss_pred HHhhhhhhHHHHHHHHHhccHhhhcCcCh-----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 333222222111 111111223444444 3334444445556677889999999999999999999999874 21
Q ss_pred --CCCCccccCCCCCCCCCC--CccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC
Q 000351 1218 --SEAPLVIESNRPPPGWPS--SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE 1293 (1623)
Q Consensus 1218 --~e~~~~~~~~~~~~~wp~--~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~ 1293 (1623)
++++.........-..-. +..|+|+|++..-+++. ..|++.||.|+|||.+-|.|+||||||||+++|.|+.+--
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g 446 (604)
T COG4178 368 AAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWG 446 (604)
T ss_pred hccCcccccCcccccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccC
Confidence 111110000000000001 46799999999987654 7899999999999999999999999999999999999999
Q ss_pred CcEEEECCEecCCCChHHhhhceEEEcCCCccccccHHhhcC-CCC--CCCHHHHHHHHHHhcHHHHHHhccCCcchhhh
Q 000351 1294 RGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLD-PFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVS 1370 (1623)
Q Consensus 1294 ~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~gTIr~NLd-~~~--~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~ 1370 (1623)
+|+|.+-. -+++-++||.|.+-.||+||-|. |.. .++|+++.++|.+|+|.++++++ ++.+..
T Consensus 447 ~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl-~~~~~W-- 512 (604)
T COG4178 447 SGRISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERL-DEEDRW-- 512 (604)
T ss_pred CCceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHH-hccCcH--
Confidence 99986541 13588999999999999999886 433 37999999999999999999997 444443
Q ss_pred cCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEe
Q 000351 1371 EAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLD 1447 (1623)
Q Consensus 1371 e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~ 1447 (1623)
..-||+||||||++||.|+++|++++|||+||+||+++|..+.+.+++..++.|||.|+||-....-.++.+-++
T Consensus 513 --~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 513 --DRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred --hhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 346999999999999999999999999999999999999999999999999999999999976665567766554
No 280
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-38 Score=357.87 Aligned_cols=200 Identities=27% Similarity=0.416 Sum_probs=173.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EcCCCccccc-cHHhhcCCCCC-------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~~-------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||+|.+|.+ |+++|+..... ..++++.++++..++.+...+. ..+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHHH
Confidence 9999999976 99999973211 1234566777777766554443 347999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999875 37899999999999977 9999999999998765
No 281
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.4e-38 Score=368.91 Aligned_cols=211 Identities=27% Similarity=0.402 Sum_probs=182.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EcCCCcc-ccccHHhhcCCCCC--------C---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHH
Q 000351 1319 IPQSPVL-FSGTVRFNLDPFSE--------H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 1386 (1623)
Q Consensus 1319 vpQdp~L-f~gTIr~NLd~~~~--------~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaL 1386 (1623)
+||++.+ +..|+++|+..... . .++++.++++..++.+. .......||||||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHL-----------ADRDMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHHH
Confidence 9999964 56799999964210 1 12235555555555433 333456799999999999
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1387 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1387 ARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||++.+|+++||||||++||+++...+.+.|++..+ +.|||++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998753 7899999999999965 99999999999999999988753
No 282
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.2e-39 Score=361.17 Aligned_cols=197 Identities=33% Similarity=0.483 Sum_probs=167.0
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEE
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 1319 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~v 1319 (1623)
+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36899999964 36999999999999999999999999999999999999999999999998874 467889999
Q ss_pred cCCCcc---ccccHHhhcCCCCC-----------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1320 PQSPVL---FSGTVRFNLDPFSE-----------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1320 pQdp~L---f~gTIr~NLd~~~~-----------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
||+|.+ |+.|+++|+..... ..++++.++++..++.++.. ....+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHH
Confidence 999976 56899999963211 01234555666666554433 334579999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
|||||+.+|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999865 57899999999999977 9999999986 55554
No 283
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=372.41 Aligned_cols=220 Identities=25% Similarity=0.355 Sum_probs=184.9
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCCC--Ch
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GL 1309 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~i--~~ 1309 (1623)
..|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 38 ~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 38 PHVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred eEEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 358999999999643 69999999999999999999999999999999999865 4999999999998643 33
Q ss_pred HHhhhceEEEcCCCccccccHHhhcCCCC---CC-C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1310 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1310 ~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~---~~-s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
..+|++++|+||+|.+|.+|+++|+.... .. + ++.+.++++..++.+.+ ..........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV-------SDRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch-------hhHhhCChhhCCHHHH
Confidence 45788999999999999889999997321 11 1 12344555555543222 1223445668999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
||++|||||+.+|++|||||||++||+++.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999876 999999999999999999999
Q ss_pred hhcCC
Q 000351 1461 LSNEG 1465 (1623)
Q Consensus 1461 l~~~~ 1465 (1623)
.+++.
T Consensus 269 ~~~~~ 273 (286)
T PRK14275 269 FTNPK 273 (286)
T ss_pred HhCCC
Confidence 86544
No 284
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.1e-38 Score=383.17 Aligned_cols=205 Identities=25% Similarity=0.353 Sum_probs=174.7
Q ss_pred CcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCE----ecCCCChHHhh----hceEEEcCCCcc
Q 000351 1254 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF----DIAKFGLMDLR----KILGIIPQSPVL 1325 (1623)
Q Consensus 1254 ~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~----di~~i~~~~lR----~~i~~vpQdp~L 1325 (1623)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||. |+...+...+| ++|+||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 6899999999999999999999999999999999999999999999996 67777665543 579999999999
Q ss_pred cc-ccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEE
Q 000351 1326 FS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1397 (1623)
Q Consensus 1326 f~-gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~IL 1397 (1623)
|+ .|+++|+.... ..+. +.+.++++.+++.++..+ ...+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~-----------~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK-----------KPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 59999996321 1222 335566666666544333 33579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1398 VLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1398 lLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
|||||||+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++.++...|.
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999999999998753 7899999999999866 999999999999999999999876544444
No 285
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=368.22 Aligned_cols=221 Identities=27% Similarity=0.419 Sum_probs=187.7
Q ss_pred ccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC-----CcEEEECCEecCC--CCh
Q 000351 1237 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAK--FGL 1309 (1623)
Q Consensus 1237 g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~-----~G~I~IdG~di~~--i~~ 1309 (1623)
+.|+++||+++|+.. .+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.+++. .+.
T Consensus 6 ~~l~~~nl~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDTQ--KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCCe--eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 359999999999643 6999999999999999999999999999999999999985 8999999999853 344
Q ss_pred HHhhhceEEEcCCCccccccHHhhcCCC----CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1310 MDLRKILGIIPQSPVLFSGTVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1310 ~~lR~~i~~vpQdp~Lf~gTIr~NLd~~----~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
..+|+.++|+||++.+|..|+++|+... +..+ ++.+.++++..++.+++. ...+.....||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIK-------HKIHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHHH
Confidence 5678899999999999999999999632 1112 233556666666654433 234455678999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeC-----ceEee
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS-----GRVLE 1453 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----G~ive 1453 (1623)
||++|||||+++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999999853 47999999999999976 999999999 99999
Q ss_pred ecChhHHhhcCCC
Q 000351 1454 YDTPEELLSNEGS 1466 (1623)
Q Consensus 1454 ~Gtp~eLl~~~~~ 1466 (1623)
.|+|+++..++..
T Consensus 237 ~~~~~~~~~~~~~ 249 (261)
T PRK14258 237 FGLTKKIFNSPHD 249 (261)
T ss_pred eCCHHHHHhCCCC
Confidence 9999999765443
No 286
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=366.67 Aligned_cols=222 Identities=26% Similarity=0.408 Sum_probs=183.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC-----CcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~-----~G~I~IdG~di~~--i~~~ 1310 (1623)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 3789999999964 36999999999999999999999999999999999999874 8999999999875 3445
Q ss_pred HhhhceEEEcCCCccccc-cHHhhcCCC---CCC-CHHHHHH----HHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1311 DLRKILGIIPQSPVLFSG-TVRFNLDPF---SEH-SDADLWE----ALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~g-TIr~NLd~~---~~~-sd~~i~~----aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
.+|++++|+||++.+|.+ |+++|+... ... .+++..+ .++..++++.+ .........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV-------KDRLKTPATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh-------hhhhcCCcccCCHHHH
Confidence 778899999999999985 999999631 111 2332222 23333333222 1222344567999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987677999999999999987 999999999999999999999
Q ss_pred hhcCCChH
Q 000351 1461 LSNEGSSF 1468 (1623)
Q Consensus 1461 l~~~~~~f 1468 (1623)
..++...+
T Consensus 235 ~~~~~~~~ 242 (252)
T PRK14272 235 FTNPRDER 242 (252)
T ss_pred HhCcCcHH
Confidence 87654433
No 287
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-38 Score=360.03 Aligned_cols=208 Identities=27% Similarity=0.394 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++||+++|+.. ..|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .++.++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999632 249999999999999999999999999999999999999999999999887654 3568999
Q ss_pred EcCCCccccc-cHHhhcCCC-CC------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPF-SE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~-~~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+|.+ |+++|+... .. ..++++.++++..++.+.+.+.| ..||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 999999732 11 12345677777777766555443 47999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998753 7899999999999876 999999999999999999998753
No 288
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.9e-38 Score=361.68 Aligned_cols=206 Identities=22% Similarity=0.324 Sum_probs=175.6
Q ss_pred cEEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---h
Q 000351 1238 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---l 1312 (1623)
.|+++|++++|+++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 489999999996532 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hhceEEEcCCCccccc-cHHhhcCCC---CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1313 -RKILGIIPQSPVLFSG-TVRFNLDPF---SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1313 -R~~i~~vpQdp~Lf~g-TIr~NLd~~---~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
+++++|+||+|.+|.+ |+++|+... .... .+++.++++..++.+...+ ....||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHH
Confidence 3579999999999875 999998631 1111 2345566666666544433 335799999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceEeee
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 1454 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1454 (1623)
++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998642 7899999999999888999999999999864
No 289
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=367.26 Aligned_cols=219 Identities=24% Similarity=0.359 Sum_probs=183.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i 1316 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 4899999999964 369999999999999999999999999999999999999999999999999988876655 4469
Q ss_pred EEEcCCCccccc-cHHhhcCCCCC-CC--------------HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhH
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFSE-HS--------------DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~~-~s--------------d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQ 1380 (1623)
+|+||+|.+|.+ |+++|+..... .. +.+..+. .....++++.+ |++........+|||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G~ 158 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYGQ 158 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHHH
Confidence 999999999986 99999974210 00 0000000 11223344443 56666667778899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||++||||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++
T Consensus 159 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 238 (255)
T PRK11300 159 QRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTP 238 (255)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCH
Confidence 9999999999999999999999999999999999999998643 7899999999999977 999999999999999999
Q ss_pred hHHhh
Q 000351 1458 EELLS 1462 (1623)
Q Consensus 1458 ~eLl~ 1462 (1623)
+++..
T Consensus 239 ~~~~~ 243 (255)
T PRK11300 239 EEIRN 243 (255)
T ss_pred HHHhh
Confidence 98864
No 290
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.3e-38 Score=365.17 Aligned_cols=223 Identities=24% Similarity=0.403 Sum_probs=184.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEe-----cCCCChHHh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD-----IAKFGLMDL 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~d-----i~~i~~~~l 1312 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+....
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999999 877766543
Q ss_pred ----hhceEEEcCCCc--ccc-ccHHhhcCC----CCCCCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhH
Q 000351 1313 ----RKILGIIPQSPV--LFS-GTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1313 ----R~~i~~vpQdp~--Lf~-gTIr~NLd~----~~~~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQ 1380 (1623)
|+.++|+||++. ++. .|+++|+.. +......++. ....++++.+ |++ +..+..+.+|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~Gq 156 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGGM 156 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHHH
Confidence 557999999984 343 478888742 1111111211 1234555554 454 45667778999999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||++|||||+++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.+ ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988653 7899999999999986 999999999999999999
Q ss_pred hHHhhcCCChHH
Q 000351 1458 EELLSNEGSSFS 1469 (1623)
Q Consensus 1458 ~eLl~~~~~~f~ 1469 (1623)
+++..++...|.
T Consensus 237 ~~~~~~~~~~~~ 248 (258)
T PRK11701 237 DQVLDDPQHPYT 248 (258)
T ss_pred HHHhcCCCCHHH
Confidence 999865543333
No 291
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=341.03 Aligned_cols=219 Identities=27% Similarity=0.441 Sum_probs=187.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i~ 1317 (1623)
++++|++..|++. ++|+||||++++||+++++||||+|||||+++|+|+.+|.+|+|.++|.||+..+++.. |..|+
T Consensus 4 L~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~ 81 (237)
T COG0410 4 LEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIA 81 (237)
T ss_pred eeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeE
Confidence 7899999999764 79999999999999999999999999999999999999999999999999999999875 66799
Q ss_pred EEcCCCccccc-cHHhhcCCCCCC-CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSEH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~~-sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
||||.-.+|+. ||.|||...... .+++-. ...+++..+-+| -|.......+.+|||||||.++|||||+.+|+
T Consensus 82 ~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 82 YVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred eCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 99999999976 999999742111 110100 011222333344 35556667778999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
+|+|||||.+|-|.--+.|.++|++..+ +-||++|-++.....+ +||.+||++|+|+..|+.+||.+++
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999874 4599999999999876 9999999999999999999999764
No 292
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-38 Score=377.84 Aligned_cols=203 Identities=28% Similarity=0.469 Sum_probs=174.4
Q ss_pred EeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccc
Q 000351 1247 RYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF 1326 (1623)
Q Consensus 1247 ~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf 1326 (1623)
+|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 5643 369999999999999999999999999999999999999999999999999976 4456788999999999999
Q ss_pred cc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEE
Q 000351 1327 SG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1398 (1623)
Q Consensus 1327 ~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILl 1398 (1623)
.. |+++|+..+. ..+ ++++.++++..++.+ .......+||||||||++|||||+++|++||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGE-----------AADRPVGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------HhCCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999997432 112 223445555555433 3333446799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1399 LDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1399 LDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
|||||++||+.+.+.+++.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999999875 47899999999999987 999999999999999999998764
No 293
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=373.05 Aligned_cols=220 Identities=27% Similarity=0.470 Sum_probs=187.0
Q ss_pred CCccEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-----CCCcEEEECCEecCCC--
Q 000351 1235 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF-- 1307 (1623)
Q Consensus 1235 ~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-----p~~G~I~IdG~di~~i-- 1307 (1623)
.+..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...
T Consensus 42 ~~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred CCceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 3446999999999965 369999999999999999999999999999999999986 6899999999998753
Q ss_pred ChHHhhhceEEEcCCCccccccHHhhcCCCCC--------------------CCHHHHHHHHHHhcHHHHHHhccCCcch
Q 000351 1308 GLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE--------------------HSDADLWEALERAHLKDAIRRNSLGLDA 1367 (1623)
Q Consensus 1308 ~~~~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~--------------------~sd~~i~~aL~~~~l~~~i~~lp~gLdt 1367 (1623)
+...+|++++|+||++.+|++|+++|+..... ..++++.++++.+++.+ ++++
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~ 192 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-------EVND 192 (305)
T ss_pred cHHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-------hhhH
Confidence 45678889999999999999999999973210 01233555555555432 2334
Q ss_pred hhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEE-EE
Q 000351 1368 QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRI-LL 1445 (1623)
Q Consensus 1368 ~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI-~V 1445 (1623)
.+.....+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++
T Consensus 193 ~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 193 RLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred HhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEE
Confidence 456667789999999999999999999999999999999999999999999998777899999999999876 9997 56
Q ss_pred EeCceEeeecChhHHhhc
Q 000351 1446 LDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1446 l~~G~ive~Gtp~eLl~~ 1463 (1623)
|++|++++.|+++++.+.
T Consensus 273 l~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 273 LTGGELVEYDDTDKIFEN 290 (305)
T ss_pred ecCCEEEEeCCHHHHHhC
Confidence 799999999999998754
No 294
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-38 Score=377.59 Aligned_cols=225 Identities=21% Similarity=0.362 Sum_probs=184.8
Q ss_pred cEEEEEEEEEeCC--CCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc----CCCcEEEECCEecCCCChHH
Q 000351 1238 SIKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE----LERGRILIDGFDIAKFGLMD 1311 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~----p~~G~I~IdG~di~~i~~~~ 1311 (1623)
-|+++|++++|+. +...+|+||||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.+++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3899999999953 22369999999999999999999999999999999999986 58999999999999888776
Q ss_pred hh----hceEEEcCCCc--ccc-ccHHhhcCC----C---CC------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhc
Q 000351 1312 LR----KILGIIPQSPV--LFS-GTVRFNLDP----F---SE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSE 1371 (1623)
Q Consensus 1312 lR----~~i~~vpQdp~--Lf~-gTIr~NLd~----~---~~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e 1371 (1623)
++ ++|+||||+|. ++. .||.+|+.. + .. ..++++.++|+.+++.+.- .....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHK--------DAMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChH--------HHHhC
Confidence 54 47999999996 333 488888741 1 00 0123456666666664211 11233
Q ss_pred CCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeC
Q 000351 1372 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDS 1448 (1623)
Q Consensus 1372 ~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1448 (1623)
....||||||||++|||||+.+|+||||||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3457999999999999999999999999999999999999999999998753 7899999999999977 999999999
Q ss_pred ceEeeecChhHHhhcCCChHHH
Q 000351 1449 GRVLEYDTPEELLSNEGSSFSK 1470 (1623)
Q Consensus 1449 G~ive~Gtp~eLl~~~~~~f~~ 1470 (1623)
|+|+|.|+++++.+++...|.+
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHH
Confidence 9999999999998765555543
No 295
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=370.60 Aligned_cols=213 Identities=26% Similarity=0.431 Sum_probs=181.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC--CChHHhhhce
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~--i~~~~lR~~i 1316 (1623)
|+++||+++|+++ +++++|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.+++. .+...+|++|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999633 369999999999999999999999999999999999999999999999999853 2345678899
Q ss_pred EEEcCCC--ccccccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp--~Lf~gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+|+||+| .+|..|+++|+.... ..+. +++.++++..++.++ .......||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGF-----------ENKPPHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchh-----------hcCChhhCCHHHHHHHHHH
Confidence 9999998 478889999996311 1222 234455555555332 3333457999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhc
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~ 1463 (1623)
||++.+|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999875 37899999999999876 999999999999999999998753
No 296
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=358.63 Aligned_cols=200 Identities=27% Similarity=0.470 Sum_probs=170.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ +++++|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999964 369999999999999999999999999999999999999999999999998753 46788999
Q ss_pred EcCCCccccc-cHHhhcCCCC---CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~---~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+|.+ |+++|+.... ..+ ++++.++++.. |++........+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERL-----------ELSEYANKRVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHc-----------CChHHHhCcHhhCCHHHHHHHHHHHHH
Confidence 9999999876 9999986421 111 12233334433 444444455568999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||++++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 47899999999999876 9999999999998765
No 297
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.8e-37 Score=350.18 Aligned_cols=198 Identities=21% Similarity=0.327 Sum_probs=148.9
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.+-+.||+|.|+.. +|.+++++|-|.--.+|+||||||.|||||+++|.|-++|+.|+..-+ -|-+||
T Consensus 586 vLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 46789999999654 589999999999999999999999999999999999999999986533 455788
Q ss_pred EEcCCCc-ccc--ccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1318 IIPQSPV-LFS--GTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1318 ~vpQdp~-Lf~--gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
..-|... -++ .|--+.|.-.-+..-++-+.+|...||..+.- |. ....||||||-|++||-.-++.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAH-------Ti---kikdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAH-------TI---KIKDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccc-------eE---eeeecCCcchHHHHHHHHhcCCC
Confidence 8888753 122 25444442111223455666666655543211 11 12469999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccC-EEEEEeCceEeee-cChhH
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCD-RILLLDSGRVLEY-DTPEE 1459 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~D-rI~Vl~~G~ive~-Gtp~e 1459 (1623)
+||||||||++||.++-..+-++|++. +..||+|+|+-..|...| ..+|+++-.|-|. |..++
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeD 788 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFED 788 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhccccHHH
Confidence 999999999999999999999999984 557999999998887633 3455555444443 44443
No 298
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=4.4e-38 Score=357.03 Aligned_cols=203 Identities=28% Similarity=0.400 Sum_probs=172.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHH---hhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~---lR~~ 1315 (1623)
|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999433 36999999999999999999999999999999999999999999999999998776544 6789
Q ss_pred eEEEcCCCccc-cccHHhhcCCC---CCCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLF-SGTVRFNLDPF---SEHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf-~gTIr~NLd~~---~~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
++|+||+|.+| ..|+++|+... ...+++ ++.++++..++.+.. .....+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKA-----------KNFPIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCchhCCHHHHHHHHHH
Confidence 99999999875 56999999742 122332 244455555554433 334467999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999864 47899999999999987 99999999999853
No 299
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.8e-38 Score=359.11 Aligned_cols=209 Identities=25% Similarity=0.360 Sum_probs=179.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+. .++++|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 4999999999964 36999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEcCCCccccccHHhhcCCC----CCC-CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1318 IIPQSPVLFSGTVRFNLDPF----SEH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1318 ~vpQdp~Lf~gTIr~NLd~~----~~~-sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|+||++.+|+.|+++|+... ... .++++.+.++..++. ++.......+||||||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 111 122333444443332 233455667899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEe-CceEeeecChh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLD-SGRVLEYDTPE 1458 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~-~G~ive~Gtp~ 1458 (1623)
+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998753 789999999999998899999995 66777888875
No 300
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=364.13 Aligned_cols=219 Identities=24% Similarity=0.381 Sum_probs=184.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc--C---CCcEEEECCEecCC--CChH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAK--FGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~--p---~~G~I~IdG~di~~--i~~~ 1310 (1623)
.|+++||+++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 3899999999964 369999999999999999999999999999999999975 4 58999999999864 3345
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCC---CCC-C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPF---SEH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~---~~~-s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
.+|++++|+||++.+|+.|+++|+... ... . ++++.++++.+++.+. +.........+|||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-------VKDHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-------hhhHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 111 1 2334455555554322 223345556789999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988667899999999999976 9999999999999999999987
Q ss_pred hcCC
Q 000351 1462 SNEG 1465 (1623)
Q Consensus 1462 ~~~~ 1465 (1623)
.++.
T Consensus 236 ~~~~ 239 (252)
T PRK14255 236 LNPK 239 (252)
T ss_pred cCCC
Confidence 6544
No 301
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=364.23 Aligned_cols=222 Identities=25% Similarity=0.451 Sum_probs=185.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECC------EecCCCChHH
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDG------FDIAKFGLMD 1311 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG------~di~~i~~~~ 1311 (1623)
.|+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 4999999999964 3699999999999999999999999999999999999999986666554 6777777778
Q ss_pred hhhceEEEcCCCccccc-cHHhhcCCC----CCCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHH
Q 000351 1312 LRKILGIIPQSPVLFSG-TVRFNLDPF----SEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 1382 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~g-TIr~NLd~~----~~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQ 1382 (1623)
+|++++|+||+|.+|.+ |+++|+... +...+++ +.++++..++.+.+ +......+..||+||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHHH
Confidence 89999999999999976 999999732 1112222 34445555543222 12234456689999999
Q ss_pred HHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1383 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1383 rLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999965 9999999999999999999998
Q ss_pred hcCCChH
Q 000351 1462 SNEGSSF 1468 (1623)
Q Consensus 1462 ~~~~~~f 1468 (1623)
+.+...+
T Consensus 241 ~~~~~~~ 247 (257)
T PRK14246 241 TSPKNEL 247 (257)
T ss_pred hCCCcHH
Confidence 6554333
No 302
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.9e-38 Score=357.93 Aligned_cols=200 Identities=28% Similarity=0.468 Sum_probs=170.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCC--CChHHhhhce
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~--i~~~~lR~~i 1316 (1623)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999965 369999999999999999999999999999999999999999999999999853 3456678899
Q ss_pred EEEcCCCcccc-ccHHhhcCCCC----CCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1317 GIIPQSPVLFS-GTVRFNLDPFS----EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1317 ~~vpQdp~Lf~-gTIr~NLd~~~----~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+|+||+|.+|. .|+++|+.... ..+.+ ++.++++.. |++........+||||||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKV-----------GLADKADAYPAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHc-----------CCHhHhhhCccccCHHHHHHHHHH
Confidence 99999999986 59999996421 22222 233334433 444444555578999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceE
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1451 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1451 (1623)
||++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999875 47899999999999976 999999999975
No 303
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.8e-38 Score=367.06 Aligned_cols=216 Identities=24% Similarity=0.367 Sum_probs=181.2
Q ss_pred cEEEEEEEEEeCCC-------CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH
Q 000351 1238 SIKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~ 1310 (1623)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999521 23699999999999999999999999999999999999999999999999999765555
Q ss_pred HhhhceEEEcCCCc--cccc-cHHhhcCC----CCCC----CHHHHHHHHHHhcHH-HHHHhccCCcchhhhcCCCCCCh
Q 000351 1311 DLRKILGIIPQSPV--LFSG-TVRFNLDP----FSEH----SDADLWEALERAHLK-DAIRRNSLGLDAQVSEAGENFSV 1378 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~--Lf~g-TIr~NLd~----~~~~----sd~~i~~aL~~~~l~-~~i~~lp~gLdt~v~e~G~~LSg 1378 (1623)
..|++++|+||+|. ++.. |+.+|+.. .... .++++.++++.+++. +.. .....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-----------SYYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-----------hcCchhcCH
Confidence 66678999999985 4444 88888752 1111 123456666666652 222 223357999
Q ss_pred hHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1379 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1379 GQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
|||||++|||||+++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999865 37899999999999987 9999999999999999
Q ss_pred ChhHHhhcC
Q 000351 1456 TPEELLSNE 1464 (1623)
Q Consensus 1456 tp~eLl~~~ 1464 (1623)
+++++.+++
T Consensus 233 ~~~~~~~~~ 241 (267)
T PRK15112 233 STADVLASP 241 (267)
T ss_pred CHHHHhcCC
Confidence 999998654
No 304
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.3e-37 Score=356.84 Aligned_cols=219 Identities=30% Similarity=0.491 Sum_probs=190.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------CcE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GTV 681 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~i 681 (1623)
++++|+++.|+.. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++| .+.+. ..+
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~~i 78 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENG-RVLVDGHDLALADPAWLRRQV 78 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC-EEEECCeehHhcCHHHHhhcE
Confidence 4789999999642 36799999999999999999999999999999999999999998 44332 359
Q ss_pred EEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 682 AYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 682 ay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
+|++|++++++.||+||+.++.. ...++....++..++.+.++.+|.+..+..+..+.+|||||||||+||||++.+|+
T Consensus 79 ~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ 158 (237)
T cd03252 79 GVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPR 158 (237)
T ss_pred EEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999988643 34445556667778888888898888888888999999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHHh
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKL 836 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 836 (1623)
++||||||++||+.+.+.+.+.+... .+|+|+|++||+++++..||++++|++|++++.|+++++.+..+.|..+
T Consensus 159 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 233 (237)
T cd03252 159 ILIFDEATSALDYESEHAIMRNMHDI-CAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYL 233 (237)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHH
Confidence 99999999999999999998866543 4689999999999999889999999999999999999988776655543
No 305
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-38 Score=364.52 Aligned_cols=211 Identities=26% Similarity=0.395 Sum_probs=182.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC--------CcEEEECCEecCCCChH
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE--------RGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~--------~G~I~IdG~di~~i~~~ 1310 (1623)
|+++|++++|+.. ++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 7899999999643 6999999999999999999999999999999999999998 99999999999888888
Q ss_pred HhhhceEEEcCCCc-cccccHHhhcCCCC--C------CC---HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCCh
Q 000351 1311 DLRKILGIIPQSPV-LFSGTVRFNLDPFS--E------HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 1378 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~-Lf~gTIr~NLd~~~--~------~s---d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSg 1378 (1623)
.+|+.++|+||++. +|..|+++|+.... . .+ ++.+.++++.. |+++.++.....|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA-----------GATALVGRDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc-----------CcHhhhcCCcccCCH
Confidence 88888999999986 57789999996421 1 11 12234444444 445555556678999
Q ss_pred hHHHHHHHHHhhh---------cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEE
Q 000351 1379 GQRQLLSLSRALL---------RRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLL 1446 (1623)
Q Consensus 1379 GQrQrLaLARALL---------~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl 1446 (1623)
|||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.+ ||++++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998653 6899999999999975 9999999
Q ss_pred eCceEeeecChhHHhh
Q 000351 1447 DSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1447 ~~G~ive~Gtp~eLl~ 1462 (1623)
++|++++.|+++++..
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999998864
No 306
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.1e-38 Score=363.48 Aligned_cols=210 Identities=22% Similarity=0.277 Sum_probs=174.7
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccc--cCCCcEEEECCEecCCCChHHh-hhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDL-RKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~--~p~~G~I~IdG~di~~i~~~~l-R~~ 1315 (1623)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|++ +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999964 36999999999999999999999999999999999994 7999999999999988877654 455
Q ss_pred eEEEcCCCccccc-cHHhhcCCCC----C------CC----HHHHHHHHHHhcHHHHHHhccCCcch-hhhcCCC-CCCh
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFS----E------HS----DADLWEALERAHLKDAIRRNSLGLDA-QVSEAGE-NFSV 1378 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~----~------~s----d~~i~~aL~~~~l~~~i~~lp~gLdt-~v~e~G~-~LSg 1378 (1623)
++|+||+|.+|.+ |+++|+.... . .+ ++++.++++.. |++. ....... .|||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~~LS~ 147 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALL-----------GMDEEFLNRSVNEGFSG 147 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHc-----------CCchhhcccccccCcCH
Confidence 9999999999876 8999985310 0 01 12233333333 3332 1222223 5999
Q ss_pred hHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc--cCEEEEEeCceEeeec
Q 000351 1379 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID--CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1379 GQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~G 1455 (1623)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47899999999999976 7999999999999999
Q ss_pred ChhHHh
Q 000351 1456 TPEELL 1461 (1623)
Q Consensus 1456 tp~eLl 1461 (1623)
+++++.
T Consensus 228 ~~~~~~ 233 (243)
T TIGR01978 228 DVELAK 233 (243)
T ss_pred CHHHhc
Confidence 998654
No 307
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=335.65 Aligned_cols=207 Identities=26% Similarity=0.399 Sum_probs=175.9
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCC----eEE------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDA----SAV------------ 676 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~----~~~------------ 676 (1623)
..++++|+++.|+ ++.+|+|||++|++++++|++||+||||||||+++.+..+...|. .+.
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 5699999999997 467999999999999999999999999999999999988776531 121
Q ss_pred ---EcCcEEEEccCcccCcccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 677 ---IRGTVAYVPQVSWIFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 677 ---~~~~iay~~Q~~~l~~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
+|++||.|+|.|--|..||+|||.+|.. .. ++..++.++.++|.+..+. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 3557999999999999999999999842 12 2446667777777765542 24456788999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhH
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 825 (1623)
||++|||||.-+|+|+|||||||||||.+..+|.+ ++..+.++-|+|+|||+++.... +|+...+..|+++|.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEe-Li~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEE-LITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHH-HHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 99999999999999999999999999999999976 66666678899999999998776 59999999999999999999
Q ss_pred HhhcC
Q 000351 826 LSNNG 830 (1623)
Q Consensus 826 l~~~~ 830 (1623)
+..+.
T Consensus 235 iF~~P 239 (253)
T COG1117 235 IFTNP 239 (253)
T ss_pred hhcCc
Confidence 87653
No 308
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=350.14 Aligned_cols=202 Identities=31% Similarity=0.469 Sum_probs=175.7
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------C
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------G 679 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------~ 679 (1623)
.|.++|+++.|+. .++++|||++|+.||++++.|||||||||||++|+|+..|+.| .+..+ .
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G-~I~~~~~~l~D~~~~~~~~R 77 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAG-RIRLNGRVLFDVSNLAVRDR 77 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCc-eEEECCEeccchhccchhhc
Confidence 4788999999973 6799999999999999999999999999999999999999999 43332 3
Q ss_pred cEEEEccCcccC-cccHHHHHhcCCCC---------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 680 TVAYVPQVSWIF-NATVRDNILFGSAF---------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 680 ~iay~~Q~~~l~-~~Tv~enI~~g~~~---------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
+||||+|+.-+| ..||.+||.||.+. ...+..+.++.|+|..--+..| ..|||||||||
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 599999999887 79999999999632 1345666788888887666666 48999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHHh
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
||||||..+|++||||||+++||++..+.+-..+.+-..+ |.|+++||||.++. +.||||++|++|+|...|+++|+.
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 9999999999999999999999999999998877665444 89999999999985 568999999999999999999997
Q ss_pred hcC
Q 000351 828 NNG 830 (1623)
Q Consensus 828 ~~~ 830 (1623)
...
T Consensus 227 ~~P 229 (345)
T COG1118 227 DHP 229 (345)
T ss_pred cCC
Confidence 654
No 309
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-38 Score=358.34 Aligned_cols=210 Identities=27% Similarity=0.448 Sum_probs=181.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999963 38999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EcCCCcccc-ccHHhhcCCC---CCC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFS-GTVRFNLDPF---SEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~---~~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+|. .|+++|+... ... .++++.++++..++.+++.+ ...+||||||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNR-----------KPETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhc-----------CcccCCHHHHHHHHHHHHH
Confidence 999999985 6999999631 111 12345566666666554443 3457999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcC
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 1464 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~ 1464 (1623)
+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998653 7999999999999876 9999999999999999999987643
No 310
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.9e-38 Score=363.81 Aligned_cols=210 Identities=22% Similarity=0.358 Sum_probs=178.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC---CcEEEECCEecCCC-----Ch
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE---RGRILIDGFDIAKF-----GL 1309 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~---~G~I~IdG~di~~i-----~~ 1309 (1623)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999964 36999999999999999999999999999999999999986 49999999998654 23
Q ss_pred HHhhhceEEEcCCCccccc-cHHhhcCCCCC---------------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCC
Q 000351 1310 MDLRKILGIIPQSPVLFSG-TVRFNLDPFSE---------------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAG 1373 (1623)
Q Consensus 1310 ~~lR~~i~~vpQdp~Lf~g-TIr~NLd~~~~---------------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G 1373 (1623)
..+|++++|+||++.+|.+ |+++|+..... ..++++.++++..++. .......
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMV-----------HFAHQRV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCH-----------HHHhCCc
Confidence 5668889999999998875 99999963210 0122344445544443 3334455
Q ss_pred CCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCce
Q 000351 1374 ENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGR 1450 (1623)
Q Consensus 1374 ~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1450 (1623)
..||||||||++||||++.+|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6799999999999999999999999999999999999999999999875 37899999999998765 99999999999
Q ss_pred EeeecChhHH
Q 000351 1451 VLEYDTPEEL 1460 (1623)
Q Consensus 1451 ive~Gtp~eL 1460 (1623)
+++.|+++++
T Consensus 231 i~~~g~~~~~ 240 (262)
T PRK09984 231 VFYDGSSQQF 240 (262)
T ss_pred EEEeCCHHHh
Confidence 9999999986
No 311
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.1e-38 Score=353.47 Aligned_cols=201 Identities=24% Similarity=0.397 Sum_probs=174.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
++++||+++|+. +++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 578999999999999999999999999999999999999999999999987644 36788999
Q ss_pred EcCCCccccc-cHHhhcCC-CC-C-----CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFSG-TVRFNLDP-FS-E-----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~-~~-~-----~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||+|.+|.+ |+++|+.. +. . ..++++.++++..++.+...+.| .+||||||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999875 99999963 11 1 12345666777777765554443 47999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecC
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gt 1456 (1623)
+++|+|+||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998753 7899999999999876 99999999999999875
No 312
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-37 Score=349.06 Aligned_cols=201 Identities=55% Similarity=0.982 Sum_probs=182.3
Q ss_pred EEEEeeEEEcCCCCC--CCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcCcEEEEccCcccCc
Q 000351 615 ISIRNGYFSWDSKAE--RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFN 692 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~--~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~~iay~~Q~~~l~~ 692 (1623)
++++|+++.|++..+ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++| .+.+.++|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G-~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSG-SVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCC-eEEEcCEEEEEecCchhcc
Confidence 478999999974211 3799999999999999999999999999999999999999999 7778889999999999999
Q ss_pred ccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcC
Q 000351 693 ATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALD 772 (1623)
Q Consensus 693 ~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD 772 (1623)
.|++||+.++..+++++..++.+.+++.+.++.+|.|.+|.++..+.+||||||||++||||++.+|+++||||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999986666667778888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhhhcCEEEEEeCCE
Q 000351 773 AHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQVDRIILVHEGM 816 (1623)
Q Consensus 773 ~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~ 816 (1623)
++..+++++.++... .+|+|+|++||+.+.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999988665533 34799999999999988899999999984
No 313
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-38 Score=377.48 Aligned_cols=212 Identities=23% Similarity=0.394 Sum_probs=181.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC----ChHHhhh
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMDLRK 1314 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i----~~~~lR~ 1314 (1623)
|++ |++++|+.. .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+. +....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 667 999999642 23 99999999999999999999999999999999999999999999998653 2345678
Q ss_pred ceEEEcCCCccccc-cHHhhcCCC-CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDPF-SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~~-~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
+++|+||++.+|+. |+++|+.+. ....++++.++++..++.++.. ....+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLD-----------RYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 99999999999975 999999742 2233455666676666544443 3346899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 9999999999999999999999999998754 6899999999999877 999999999999999999999977643
No 314
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-38 Score=364.37 Aligned_cols=202 Identities=31% Similarity=0.452 Sum_probs=178.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEE
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVA 682 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ia 682 (1623)
.|+++|+++.|++. .+++|+||+|++||+++++|||||||||||++|+|+.+|++| .+.+. +.||
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G-~I~i~g~~vt~l~P~~R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSG-EILIDGRDVTDLPPEKRGIA 78 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEECCEECCCCChhHCCEE
Confidence 58999999999741 299999999999999999999999999999999999999999 55443 3699
Q ss_pred EEccCcccC-cccHHHHHhcCCCC-------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGSAF-------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~~~-------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
+|+|+.-|+ ..||+|||.|+... .++++.++.+..++.+.++..|. .||||||||||||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 999999997 67999999998543 24677888899999999998884 799999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|.++|+++|||||+|+||++.+..+-..+.+... -|.|+|.||||..++. .+|||++|++|+|.+.|++.|+.++.
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999999988877666333 3899999999988765 58999999999999999999998664
No 315
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-35 Score=330.16 Aligned_cols=506 Identities=19% Similarity=0.223 Sum_probs=342.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000351 292 LRALNSSLGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDGPAWIGY-IYAFSIFVGVVL-GVLCEAQYFQNVMRVG 369 (1623)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~~~~~~~~r~~ 369 (1623)
+-.++|.++|.++....+.++..+.. ..++..+-+++.+.+....++ .+.+++.+..++ +.++. ....-+|
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~g---~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~----lg~t~~g 76 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGALG---IGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQ----LGLTTLG 76 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 44678899998888776666554433 334444444443322211111 111111111111 11111 1222233
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000351 370 FRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVCQALHTLWSAPFRIIISLVLLYNELGVASLLGALL 449 (1623)
Q Consensus 370 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~g~i~nlms~Dv~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~~~l~g~~~ 449 (1623)
.+.-..++..+.+|.+.-+....++.+++.++..++.|+..|.-.+..+.++..+.+-+..++..|++..+..+++.++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34444555666778888887778888899999999999999997777888888777777778888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000351 450 LVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRK-AQFLAACNSF 528 (1623)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~~~~~~i~~~r~~el~~~~~-~~~l~~~~~~ 528 (1623)
+++.+..+.+...+.-+...+..+.-|+..+..+.+++|-|.+|++.--... ...+.-...-+..++ ..+...+...
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~--~h~~~~~~~a~~~r~~~~~~n~f~~l 234 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY--VHNNLYIPDAQEYRHHIIRANTFHLL 234 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH--HHhhhcCcchHHHHhhhhhhhHHHHH
Confidence 8888888888888888888999999999999999999999999987622111 111110000001111 1111111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHh-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC
Q 000351 529 ILNSIP-VLVTVVSFGMFTLL-GGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKILLPNP 606 (1623)
Q Consensus 529 ~~~~~~-~~~~~~~f~~~~~~-~~~lt~~~~ft~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 606 (1623)
..+... ++..++....|+.. -+--+...+.|....+-.++.|+.++...++.+..|.++++||.++-..|+..+.+.+
T Consensus 235 a~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~ 314 (546)
T COG4615 235 AVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRP 314 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCC
Confidence 111111 12222222222221 1222333455555555668899999999999999999999999998776655444433
Q ss_pred CCCCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcCc------
Q 000351 607 PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGT------ 680 (1623)
Q Consensus 607 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~~------ 680 (1623)
...+.-..++++|+.|+|++. ..-+..||++|++||++-|+|.||||||||+++|.|++.|++| .+.++|+
T Consensus 315 q~~p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG-~I~ldg~pV~~e~ 391 (546)
T COG4615 315 QAFPDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSG-EILLDGKPVSAEQ 391 (546)
T ss_pred CcCCcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCC-ceeECCccCCCCC
Confidence 333445679999999999853 3788999999999999999999999999999999999999999 5555442
Q ss_pred -------EEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 -------VAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 -------iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
++-++-+-|+|+.++ .++. .+++..++-++.-.+.+..+ +.+|..+. ..||-|||.|+|+-
T Consensus 392 ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs~-----~kLStGQkKRlAll 460 (546)
T COG4615 392 LEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKWLQRLELAHKTS-LNDGRFSN-----LKLSTGQKKRLALL 460 (546)
T ss_pred HHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHHHHHHHHhhhhc-ccCCcccc-----cccccchHHHHHHH
Confidence 344445555554332 2222 34444444444444444333 23333332 47999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 820 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 820 (1623)
-|++-+.||++|||=-+--||+-+++.++.++-.+ ..|||++.||||-++...|||++.+++|++++.
T Consensus 461 ~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 461 LALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 99999999999999999999999999999887643 359999999999999999999999999999863
No 316
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.3e-37 Score=360.30 Aligned_cols=216 Identities=25% Similarity=0.393 Sum_probs=179.9
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC----CCcEEEECCEecCCCChHHhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----ERGRILIDGFDIAKFGLMDLR 1313 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p----~~G~I~IdG~di~~i~~~~lR 1313 (1623)
.|+++|++++| + .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 48999999999 3 3699999999999999999999999999999999999999 999999999998632 2234
Q ss_pred hceEEEcCCCc-ccc--ccHHhhcCC----CC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHH
Q 000351 1314 KILGIIPQSPV-LFS--GTVRFNLDP----FS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 1385 (1623)
Q Consensus 1314 ~~i~~vpQdp~-Lf~--gTIr~NLd~----~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLa 1385 (1623)
+.++|+||+|. .|. .|+.+|+.. ++ ...++++.++++.+++.+. ++.++.....||||||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHH
Confidence 67999999985 343 477777532 11 2234556666776655321 12345566789999999999
Q ss_pred HHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1386 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1386 LARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998753 7899999999999976 99999999999999999999986
Q ss_pred cCCC
Q 000351 1463 NEGS 1466 (1623)
Q Consensus 1463 ~~~~ 1466 (1623)
+...
T Consensus 231 ~~~~ 234 (254)
T PRK10418 231 APKH 234 (254)
T ss_pred CCCC
Confidence 5443
No 317
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-38 Score=368.22 Aligned_cols=203 Identities=34% Similarity=0.502 Sum_probs=179.2
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcE
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTV 681 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~i 681 (1623)
..++++|++++|+ +..+++|+||+|++||+++++|||||||||+|++|+|+..|++| .+.+. +.|
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G-~I~l~G~~i~~lpp~kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSG-EILLDGEDITDVPPEKRPI 79 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEECCEECCCCChhhccc
Confidence 4699999999997 46899999999999999999999999999999999999999999 55443 359
Q ss_pred EEEccCcccC-cccHHHHHhcCCC----CC-H---HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 682 AYVPQVSWIF-NATVRDNILFGSA----FE-P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 682 ay~~Q~~~l~-~~Tv~enI~~g~~----~~-~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
++|+|+.-|| +.||+|||.||.. .. + +++.++++..+|.+..+..| ..||||||||||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 9999999998 7899999999965 12 2 36778888888887666666 48999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcch-hhhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHF-LSQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|||..+|+++|||||+|+||.+.++++-..+..... .|.|.|+||||.+. +..+|||++|++|+|.+.|+++|+....
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 999999999999999999999999999888776433 39999999999887 5678999999999999999999998764
No 318
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.6e-37 Score=400.61 Aligned_cols=220 Identities=24% Similarity=0.367 Sum_probs=151.9
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhh------ccc---cCCCcEE-----------
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLF------RIV---ELERGRI----------- 1297 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~------rl~---~p~~G~I----------- 1297 (1623)
.|+++|++. ..|+|+|++|++||.+||+|+||||||||+.-++ ++. .+..+..
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 478888852 3599999999999999999999999999998764 111 1222333
Q ss_pred -EECCEecCCCC----------hHHhhhce---------EEEcCCCcccc-----------ccHHhhcCCCCC-------
Q 000351 1298 -LIDGFDIAKFG----------LMDLRKIL---------GIIPQSPVLFS-----------GTVRFNLDPFSE------- 1339 (1623)
Q Consensus 1298 -~IdG~di~~i~----------~~~lR~~i---------~~vpQdp~Lf~-----------gTIr~NLd~~~~------- 1339 (1623)
.||-.++..-+ .+.+|.-. ++-++...+.+ |+++.|+.+..+
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 33333322111 02233322 33333322222 345544432211
Q ss_pred -----------------CCHHH-----HHHHHHHh-------cHHHHHHhccCCcch-hhhcCCCCCChhHHHHHHHHHh
Q 000351 1340 -----------------HSDAD-----LWEALERA-------HLKDAIRRNSLGLDA-QVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1340 -----------------~sd~~-----i~~aL~~~-------~l~~~i~~lp~gLdt-~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
.+-.+ +.++++.. ...+.++. .|++. .++.....||||||||+.|||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~--vgL~~l~l~~~~~tLSgGEkQRl~LAra 844 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVD--VGLGYIKLGQPATTLSGGEAQRVKLAKE 844 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHH--CCCCcccccCCcccCCHHHHHHHHHHHH
Confidence 11111 22332221 01122333 26654 4677778999999999999999
Q ss_pred hhcCC---cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEE------eCceEeeecChhH
Q 000351 1390 LLRRS---KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLL------DSGRVLEYDTPEE 1459 (1623)
Q Consensus 1390 LL~~p---~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl------~~G~ive~Gtp~e 1459 (1623)
|+++| +++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|++
T Consensus 845 L~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~e 924 (943)
T PRK00349 845 LSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEE 924 (943)
T ss_pred HhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHH
Confidence 99999 9999999999999999999999999875 578999999999999889999999 7999999999999
Q ss_pred HhhcCCC
Q 000351 1460 LLSNEGS 1466 (1623)
Q Consensus 1460 Ll~~~~~ 1466 (1623)
+.+++.+
T Consensus 925 l~~~~~s 931 (943)
T PRK00349 925 VAKVEAS 931 (943)
T ss_pred HHhCccc
Confidence 9876643
No 319
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=5.3e-34 Score=349.17 Aligned_cols=446 Identities=17% Similarity=0.188 Sum_probs=323.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhcCCCH-----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000351 361 YFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFAS-----GKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVL 434 (1623)
Q Consensus 361 ~~~~~~r~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~-----g~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~l 434 (1623)
..+...++..+.|..|...+.++.+.-....+-.... -..=.++..|+..+.+.. .....+..+.+.++.-..+
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4455677889999999999999999877543322211 123367888888887743 3334555555555555556
Q ss_pred HHHHHh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccH
Q 000351 435 LYNELG---------------VASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWEN 499 (1623)
Q Consensus 435 L~~~lg---------------~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~L~~ik~IK~~~~e~ 499 (1623)
||...| ...++.++-+++...+..++++...+..-+..+.-..-......+.++...|-+|+-|+
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~ 265 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEK 265 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcH
Confidence 664443 22223333333333344455555555555555555555556667888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000351 500 SFQSKVQNVRNDELSWFRKAQFLAACNSFILNSIPVLVTVVS--FGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNM 577 (1623)
Q Consensus 500 ~~~~~i~~~r~~el~~~~~~~~l~~~~~~~~~~~~~~~~~~~--f~~~~~~~~~lt~~~~ft~l~l~~~l~~pl~~l~~~ 577 (1623)
...+++++.-..-++..++......-...+......+..++- .++-.++.|+++.+....+-..|+.+...+..+...
T Consensus 266 ~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~ 345 (604)
T COG4178 266 VERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDN 345 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887766555554433332222222222111111111111 111224578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccc--c--CCCCCC------CCCCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEE
Q 000351 578 ITQVVNANVSLKRMEEFLLAEEKI--L--LPNPPL------TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVA 647 (1623)
Q Consensus 578 ~~~~~~a~~s~~RI~~fL~~~e~~--~--~~~~~~------~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ 647 (1623)
++.+.+-+++..|+.+|-..-+.. + .+.... ...+..|+++|++..-++ +++.+++.||++++|+.+.
T Consensus 346 ~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ll~~l~~~v~~G~~ll 423 (604)
T COG4178 346 YDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD--GQTLLSELNFEVRPGERLL 423 (604)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC--CCeeeccceeeeCCCCEEE
Confidence 999999999999999997543210 0 000000 001467999999999775 4689999999999999999
Q ss_pred EEcCCCCChhHHHHHHcCCccCCCCCeEEEcC-cEEEEccCcccCcccHHHHHhcCC---CCCHHHHHHHHHHhCchhHH
Q 000351 648 IVGGTGEGKTSLISAMLGELPPVSDASAVIRG-TVAYVPQVSWIFNATVRDNILFGS---AFEPARYEKAIDVTSLQHDL 723 (1623)
Q Consensus 648 ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~-~iay~~Q~~~l~~~Tv~enI~~g~---~~~~~~~~~~~~~~~l~~~~ 723 (1623)
|.|+||||||||+++|+|+.|--+|......+ .+-|+||.|.+..||.||-|++.. +++++.+.+++..|+|.+-.
T Consensus 424 I~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~ 503 (604)
T COG4178 424 ITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLA 503 (604)
T ss_pred EECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHH
Confidence 99999999999999999999988884333323 489999999999999999999874 27889999999999999988
Q ss_pred hcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchh
Q 000351 724 DLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFL 803 (1623)
Q Consensus 724 ~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l 803 (1623)
+.+.+-++ -...|||||||||++||.++++|++++|||.|||||++++..+++. ++..+.+.|+|-|.|+....
T Consensus 504 ~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~~lp~~tvISV~Hr~tl~ 577 (604)
T COG4178 504 ERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKEELPDATVISVGHRPTLW 577 (604)
T ss_pred HHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHhhCCCCEEEEeccchhhH
Confidence 88765332 3457999999999999999999999999999999999999999975 55567899999999999888
Q ss_pred hhcCEEEEEeC
Q 000351 804 SQVDRIILVHE 814 (1623)
Q Consensus 804 ~~~d~i~~l~~ 814 (1623)
...++.+.+.+
T Consensus 578 ~~h~~~l~l~~ 588 (604)
T COG4178 578 NFHSRQLELLD 588 (604)
T ss_pred HHHhhheeecc
Confidence 87777776654
No 320
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.8e-38 Score=431.23 Aligned_cols=220 Identities=27% Similarity=0.394 Sum_probs=190.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|+++..++|+|+||+|++||++||+|+||||||||+++|.|++.|++|+|.++|.|+.+ .....|+++|
T Consensus 928 ~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~IG 1006 (2272)
T TIGR01257 928 GVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSLG 1006 (2272)
T ss_pred eEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcEE
Confidence 599999999996433479999999999999999999999999999999999999999999999999975 5667889999
Q ss_pred EEcCCCccccc-cHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
+|||++.+|+. |++|||..+. ..+. +++.+.++.. |++........+||||||||++||||
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~v-----------gL~~~~~~~~~~LSGGqKQRLsLArA 1075 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDT-----------GLHHKRNEEAQDLSGGMQRKLSVAIA 1075 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999975 9999997532 1222 2344444444 44444455567899999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChH
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSF 1468 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f 1468 (1623)
|+.+|+|||||||||+||+.+.+.+++.|++..+++|||++||+++.+.. ||||++|++|++++.|++++|.++.+..|
T Consensus 1076 Li~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy 1155 (2272)
T TIGR01257 1076 FVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGF 1155 (2272)
T ss_pred HHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcE
Confidence 99999999999999999999999999999998778999999999999987 99999999999999999999987765444
Q ss_pred H
Q 000351 1469 S 1469 (1623)
Q Consensus 1469 ~ 1469 (1623)
+
T Consensus 1156 ~ 1156 (2272)
T TIGR01257 1156 Y 1156 (2272)
T ss_pred E
Confidence 3
No 321
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=360.50 Aligned_cols=202 Identities=23% Similarity=0.338 Sum_probs=171.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 3699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EcCCCcccc-ccHHhhcCCCC---CCCH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~---~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+||++.+|. .|+++|+.... .... +++.++++..++. ........+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLE-----------GAEKRYIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-----------hHhhCChhhCCHHHHHHHHHHHHH
Confidence 999999887 59999996421 1122 2344445554443 333444568999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEe--CceEeeecChh
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 1458 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~ive~Gtp~ 1458 (1623)
+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.++++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 99999999999999999999999999999863 37999999999999876 99999998 59999988754
No 322
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.6e-37 Score=353.15 Aligned_cols=168 Identities=24% Similarity=0.384 Sum_probs=131.9
Q ss_pred ccceeeEe-----CCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCc-ccccc
Q 000351 1256 LHGLSFTI-----PPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPV-LFSGT 1329 (1623)
Q Consensus 1256 L~~isl~I-----~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~-Lf~gT 1329 (1623)
+.++.|++ ..||.+|++||||-||||++++|.|.++|++|. ..+ -+++|=||--. -|+||
T Consensus 352 ~g~F~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gt 417 (591)
T COG1245 352 YGDFKLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGT 417 (591)
T ss_pred cCceEEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCc
Confidence 34455554 457899999999999999999999999999998 222 25888888542 48899
Q ss_pred HHhhcCCCCC--CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCC
Q 000351 1330 VRFNLDPFSE--HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVD 1407 (1623)
Q Consensus 1330 Ir~NLd~~~~--~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD 1407 (1623)
|++-|.--.. +.+. ..+.-|. .|..++..+...-.+|||||.||+++|-||.|++++.+||||+|.||
T Consensus 418 V~~~l~~~~~~~~~~s---------~~~~ei~-~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LD 487 (591)
T COG1245 418 VEDLLRSAIRSAFGSS---------YFKTEIV-KPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLD 487 (591)
T ss_pred HHHHHHHhhhhhcccc---------hhHHhhc-CccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhcc
Confidence 9876531100 1111 1111111 25667777777778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEe
Q 000351 1408 VRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD 1447 (1623)
Q Consensus 1408 ~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~ 1447 (1623)
.+-.-.+-++||+.. .++|.++|-|++..+.- +||++|.+
T Consensus 488 vEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 488 VEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEe
Confidence 999999999999865 46899999999999877 99999997
No 323
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.8e-37 Score=352.37 Aligned_cols=215 Identities=31% Similarity=0.529 Sum_probs=187.6
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------CcE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GTV 681 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~i 681 (1623)
++++|+++.|++..++++|+|+||++++|++++|+|+||||||||+++|+|+++|++| .+.+. ..+
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G-~i~~~g~~~~~~~~~~~~~~i 79 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSG-EILLDGVDIRDLNLRWLRSQI 79 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCC-EEEECCEehhhcCHHHHHhhE
Confidence 4689999999753345799999999999999999999999999999999999999999 44332 259
Q ss_pred EEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 682 AYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 682 ay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
+|++|++.+++.|++||+.++.. ...++....++.+++.+.++.+|.|.++..+....+||||||||++||||++.+|+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 159 (238)
T cd03249 80 GLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPK 159 (238)
T ss_pred EEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999988999999998643 34455566677788888888899888888888889999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcCh
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGE 831 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 831 (1623)
++||||||++||+.+.+.+.+.+.... +|+|+|++||+++++..||+|++|++|++++.|+.+++.....
T Consensus 160 llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 229 (238)
T cd03249 160 ILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKG 229 (238)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcCh
Confidence 999999999999999999988665444 7899999999999998899999999999999999888765443
No 324
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=348.44 Aligned_cols=204 Identities=29% Similarity=0.528 Sum_probs=178.7
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE-------------EcC
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 679 (1623)
..++++|++|.|++. .++|+|+||+|++|+.++|+|+||||||||+++|.|.++|++|.... +++
T Consensus 2 ~~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~ 79 (235)
T COG1122 2 RMIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQ 79 (235)
T ss_pred ceEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhc
Confidence 358999999999853 68999999999999999999999999999999999999999984311 245
Q ss_pred cEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
+||||+|+| .+|..||.|.|.||.. .++ ++..++++.|++.+..+..| .+||||||||||
T Consensus 80 ~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRva 148 (235)
T COG1122 80 KVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVA 148 (235)
T ss_pred ceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHH
Confidence 699999999 6789999999999842 333 45677888999988877666 489999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHhh
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||.+|..+|+++|||||||+||+...+.+.+.+.+.... |+|+|++|||++.+.. ||++++|++|+++.+|+++++.+
T Consensus 149 IA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 149 IAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 999999999999999999999999999999876664444 6899999999999875 99999999999999999988875
Q ss_pred c
Q 000351 829 N 829 (1623)
Q Consensus 829 ~ 829 (1623)
+
T Consensus 229 ~ 229 (235)
T COG1122 229 D 229 (235)
T ss_pred h
Confidence 4
No 325
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.2e-37 Score=351.50 Aligned_cols=204 Identities=25% Similarity=0.401 Sum_probs=176.2
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.... ++.+++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EcCCCcccc-ccHHhhcCCC---CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1319 IPQSPVLFS-GTVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~---~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
+||++.+|. .|+++|+..+ ....++++.++++..++.+... ....+||||||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGK-----------KKAKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHh-----------hhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 5999999632 1234556777777766654433 233579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++++
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999864 47899999999999865 99999999999999999865
No 326
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-37 Score=338.51 Aligned_cols=192 Identities=29% Similarity=0.449 Sum_probs=161.0
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc---------------
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------- 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------- 678 (1623)
++++|+++.|..+. ..++|+++||+|++||+++|+|||||||||||++|.|...|++| .+.+.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G-~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSG-EVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCc-eEEECCEEcCcCCHHHHHHH
Confidence 57899999997432 24799999999999999999999999999999999999999988 43332
Q ss_pred --CcEEEEccCcccC-cccHHHHHhcC----CCCC---HHHHHHHHHHhCchhHHh-cCCCCCcccccCCCCccChHHHH
Q 000351 679 --GTVAYVPQVSWIF-NATVRDNILFG----SAFE---PARYEKAIDVTSLQHDLD-LLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 679 --~~iay~~Q~~~l~-~~Tv~enI~~g----~~~~---~~~~~~~~~~~~l~~~~~-~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
..|||++|+..|. +.|++|||.+. .... .++.+..++..+|.+... ..| .+|||||||
T Consensus 81 R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQ 149 (226)
T COG1136 81 RRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQ 149 (226)
T ss_pred HHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHH
Confidence 3599999998875 78999999853 2111 344556666667776555 445 489999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhhhcCEEEEEeCCEEE
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQVDRIILVHEGMVK 818 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 818 (1623)
||||||||+.+|++++.||||.+||.++++.|++.+.... ..|+|+|+||||......|||++.|+||++.
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 9999999999999999999999999999999998665543 3489999999999999999999999999854
No 327
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.7e-37 Score=374.43 Aligned_cols=211 Identities=23% Similarity=0.371 Sum_probs=178.1
Q ss_pred EEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC----hHHhhhceEE
Q 000351 1243 DVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG----LMDLRKILGI 1318 (1623)
Q Consensus 1243 nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~----~~~lR~~i~~ 1318 (1623)
|++++|++. . + |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ....|++++|
T Consensus 4 ~l~~~~~~~--~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF--S-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE--E-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 3 5 999999999999999999999999999999999999999999999986532 2356788999
Q ss_pred EcCCCccccc-cHHhhcCCCC-CCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFS-EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~-~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
+||++.+|.+ |+++|+.... ... ++++.+.++.. |++........+||||||||++|||||+.
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELL-----------GIGHLLGRLPGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHc-----------CChhHhcCChhhCCHHHHHHHHHHHHHHc
Confidence 9999999976 9999997421 111 12244444444 44444455557899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChH
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSF 1468 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f 1468 (1623)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999999999999999999999999998653 7899999999999876 99999999999999999999987665444
No 328
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-37 Score=349.05 Aligned_cols=211 Identities=29% Similarity=0.512 Sum_probs=187.2
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.++++|++++|+. .+++++|+||++++|++++|+||||||||||+++|+|+.+|++| .+.+. ..
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G-~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKG-QILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC-EEEECCEeHHHcCHHHHhhh
Confidence 4789999999963 34699999999999999999999999999999999999999999 44332 35
Q ss_pred EEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
++|++|++++++.|++||+.++.+ ...++....++.+++.+.++.+|.|..+.++....+|||||||||+|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999998899999998753 3445667778888999999999988888888899999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhh
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
+++||||||++||+.+.+.+.+.+.. ..+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999886554 346899999999999998899999999999999999887754
No 329
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-37 Score=350.06 Aligned_cols=217 Identities=32% Similarity=0.572 Sum_probs=189.3
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------CcE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GTV 681 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~i 681 (1623)
++++|+++.|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++| .+.+. ..+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G-~v~~~g~~~~~~~~~~~~~~i 77 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSG-SILIDGQDIREVTLDSLRRAI 77 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCC-EEEECCEEhhhCCHHHHHhhE
Confidence 468999999963 35799999999999999999999999999999999999999999 44432 249
Q ss_pred EEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 682 AYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 682 ay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
+|++|++++++.|++||+.++.. ...+.....++.+++.+.++.+|.|.++.++.+..+||||||||++|||||+.+|+
T Consensus 78 ~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ 157 (236)
T cd03253 78 GVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPP 157 (236)
T ss_pred EEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998743 34455666778888988889999999998999999999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChhHHH
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQK 835 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 835 (1623)
++||||||++||+++.+.+.+.+.... +|+|+|++||+.+.+..||++++|++|++++.|+.+++......++.
T Consensus 158 llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~ 231 (236)
T cd03253 158 ILLLDEATSALDTHTEREIQAALRDVS-KGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAE 231 (236)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHH
Confidence 999999999999999999987665433 48999999999999988999999999999999999888765544433
No 330
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-37 Score=350.30 Aligned_cols=215 Identities=33% Similarity=0.541 Sum_probs=188.1
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------CcE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GTV 681 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~i 681 (1623)
|+++|++++|++. ++++++|+||++++|++++|+||||||||||+++|+|+++|++| .+.+. ..+
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~~~~i 78 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSG-RILIDGHDVRDYTLASLRRQI 78 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCC-EEEECCEEhhhCCHHHHHhhE
Confidence 4789999999642 24799999999999999999999999999999999999999999 44332 359
Q ss_pred EEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 682 AYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 682 ay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
+|++|++++++.|++||+.++.. .....+....+.+++.+.++.+|.|..+..+....+||||||||++||||++.+|+
T Consensus 79 ~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 158 (234)
T cd03251 79 GLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPP 158 (234)
T ss_pred EEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998743 34556667778888888999998888888888999999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcChh
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGEL 832 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 832 (1623)
++||||||++||+.+.+.+.+.+.. ..+++|+|++||+++.+..||++++|++|++++.|+.+++......
T Consensus 159 lllLDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~ 229 (234)
T cd03251 159 ILILDEATSALDTESERLVQAALER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGV 229 (234)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcc
Confidence 9999999999999999999876544 4468999999999999988999999999999999999888755443
No 331
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=335.76 Aligned_cols=171 Identities=50% Similarity=0.798 Sum_probs=161.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+...+++++|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999996542369999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1398 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILl 1398 (1623)
+||++.+|+.|+++|+ ||+|||||++||||++++|++||
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999987 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCce
Q 000351 1399 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGR 1450 (1623)
Q Consensus 1399 LDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1450 (1623)
|||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998877799999999999998899999999985
No 332
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.3e-37 Score=353.54 Aligned_cols=223 Identities=24% Similarity=0.364 Sum_probs=194.7
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------c
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------R 678 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~ 678 (1623)
...++++|++++|+.. .+.+|+|+||+|++|++++|+|+||||||||+++|+|+++|++| .+.+ +
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDG-KIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCC-eEEECCEEhhhCCHHHHh
Confidence 3569999999999742 35799999999999999999999999999999999999999999 4433 2
Q ss_pred CcEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000351 679 GTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 758 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~ 758 (1623)
..|+|++|+|+++++|++||+........+++..+++..++.+.++.+|.|.++.+++.+.+||||||||++||||++++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~ 174 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRK 174 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 35999999999999999999976544455667778888899999999999999999999999999999999999999999
Q ss_pred CCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcC-hhHHHhH
Q 000351 759 SDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG-ELFQKLM 837 (1623)
Q Consensus 759 ~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~~~ 837 (1623)
|+++||||||++||+++.+.+++.+. ...+++|+|++||+++.+..||+|++|++|++++.|+++++.... +.+.+++
T Consensus 175 p~llllDEPt~gLD~~~~~~l~~~l~-~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 175 SSILIMDEATASIDMATENILQKVVM-TAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHH-HhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999988877554 344689999999999999889999999999999999999987653 4455544
No 333
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.9e-38 Score=338.58 Aligned_cols=220 Identities=28% Similarity=0.449 Sum_probs=188.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i~ 1317 (1623)
++.+|++++|+.- .+++||||++++||++||+|||||||||++|++.|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 6789999999753 69999999999999999999999999999999999999999999999999999999886 44589
Q ss_pred EEcCCCccccc-cHHhhcCCCCC------------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPFSE------------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~~~------------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
--+|.+-+|++ ||-||+.-... ....+-.++.++ +.+.++. .||+....+...+||+|||+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~--A~~~Le~--vgL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARER--ARELLEF--VGLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHH--HHHHHHH--cCCchhhcchhhcCChhHhHHH
Confidence 99999999987 99999852100 000111222222 2233333 3777777888889999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
-|||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-|||+.+++ ||||+||+.|+++..|+|+|..
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999999999999999999999874 4899999999999998 9999999999999999999998
Q ss_pred hcC
Q 000351 1462 SNE 1464 (1623)
Q Consensus 1462 ~~~ 1464 (1623)
+++
T Consensus 239 ~dp 241 (250)
T COG0411 239 NNP 241 (250)
T ss_pred cCH
Confidence 764
No 334
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.7e-37 Score=353.22 Aligned_cols=212 Identities=25% Similarity=0.390 Sum_probs=171.2
Q ss_pred EEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc---CCCcEEEECCEecCCCChHHhh
Q 000351 1239 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~---p~~G~I~IdG~di~~i~~~~lR 1313 (1623)
+.|+||+++|+.. .+++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.++|.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999654 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred hceEEEcCCCccccc-cHHhhcCCCCC-CCHHHHHHHHHHhcHHH-HHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1314 KILGIIPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~g-TIr~NLd~~~~-~sd~~i~~aL~~~~l~~-~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
++++|+||++.+|.+ |+++|+..... .......+........+ .++. .+++........+||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRD--LALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHh--hcchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999973210 00000001111111112 2222 2444444555678999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCc-hhhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRL-NTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl-~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|++||++ ..+.. ||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 478999999998 46655 9999999999999876
No 335
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.7e-37 Score=357.66 Aligned_cols=223 Identities=22% Similarity=0.392 Sum_probs=182.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEe-----cCCCChHHh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD-----IAKFGLMDL 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~d-----i~~i~~~~l 1312 (1623)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+....
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGGG--KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCCc--eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 48999999999643 68999999999999999999999999999999999999999999999988 776665533
Q ss_pred ----hhceEEEcCCCc--cc-cccHHhhcCC----CCCCCHHHHHHHHHHhcHHHHHHhccCCcc-hhhhcCCCCCChhH
Q 000351 1313 ----RKILGIIPQSPV--LF-SGTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 1380 (1623)
Q Consensus 1313 ----R~~i~~vpQdp~--Lf-~gTIr~NLd~----~~~~sd~~i~~aL~~~~l~~~i~~lp~gLd-t~v~e~G~~LSgGQ 1380 (1623)
++.++++||+|. ++ ..|+.+|+.. +......+. ...+.++++.+ |++ +........|||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG~ 153 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGGM 153 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHHH
Confidence 467999999985 22 3488888731 111111111 12344555554 454 45666778899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 154 ~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~ 233 (253)
T TIGR02323 154 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLT 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999988643 7899999999999986 999999999999999999
Q ss_pred hHHhhcCCChHH
Q 000351 1458 EELLSNEGSSFS 1469 (1623)
Q Consensus 1458 ~eLl~~~~~~f~ 1469 (1623)
+++..++...|.
T Consensus 234 ~~~~~~~~~~~~ 245 (253)
T TIGR02323 234 DQVLDDPQHPYT 245 (253)
T ss_pred HHHhcCCCCHHH
Confidence 999865443343
No 336
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.6e-37 Score=357.92 Aligned_cols=224 Identities=24% Similarity=0.374 Sum_probs=185.2
Q ss_pred EEEEEEEEEeCCC-------CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH-
Q 000351 1239 IKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM- 1310 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~- 1310 (1623)
|+++||+++|+.. .+++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8999999999731 24799999999999999999999999999999999999999999999999999887653
Q ss_pred --HhhhceEEEcCCCc--cc-cccHHhhcCCC----CCCCHHHHHHHHHHhcHHHHHHhccCCcch-hhhcCCCCCChhH
Q 000351 1311 --DLRKILGIIPQSPV--LF-SGTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQ 1380 (1623)
Q Consensus 1311 --~lR~~i~~vpQdp~--Lf-~gTIr~NLd~~----~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt-~v~e~G~~LSgGQ 1380 (1623)
.+|+.++|+||++. ++ ..|+++|+... ...+. .-....+.+.++.+ |+++ ........|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~-----~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDK-----AERLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCH-----HHHHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 46789999999983 44 35999997421 11111 11122344555543 6653 4566677899999
Q ss_pred HHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1381 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1381 rQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
|||++|||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998653 7899999999999986 999999999999999999
Q ss_pred hHHhhcCCChHHH
Q 000351 1458 EELLSNEGSSFSK 1470 (1623)
Q Consensus 1458 ~eLl~~~~~~f~~ 1470 (1623)
+++.. .++.|..
T Consensus 237 ~~~~~-~~~~~~~ 248 (268)
T PRK10419 237 GDKLT-FSSPAGR 248 (268)
T ss_pred hhccC-CCCHHHH
Confidence 99875 3444443
No 337
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.8e-37 Score=351.51 Aligned_cols=202 Identities=26% Similarity=0.388 Sum_probs=171.6
Q ss_pred EEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH---Hhh
Q 000351 1239 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLR 1313 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~---~lR 1313 (1623)
++++|++++|+++ ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999999642 14699999999999999999999999999999999999999999999999999877653 467
Q ss_pred hceEEEcCCCcccc-ccHHhhcCCCC----CCCHH----HHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHH
Q 000351 1314 KILGIIPQSPVLFS-GTVRFNLDPFS----EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 1384 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~-gTIr~NLd~~~----~~sd~----~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrL 1384 (1623)
+.++|+||+|.+|. .|+.+|+.+.. ..+.+ ++.++++..++ +........+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGL-----------GDHLDYYPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHH
Confidence 88999999999987 69999997421 12222 24444444444 4444444568999999999
Q ss_pred HHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhccCEEEEEeCceE
Q 000351 1385 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRV 1451 (1623)
Q Consensus 1385 aLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1451 (1623)
+||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998753 7999999999997666999999999986
No 338
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-37 Score=317.40 Aligned_cols=199 Identities=28% Similarity=0.484 Sum_probs=172.0
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC-----------cEEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG-----------TVAY 683 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~-----------~iay 683 (1623)
+.++++.|+|+.. =-..+++|++||+++|+||+||||||||++|+|+..|.+| .+.+++ .++.
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G-~i~i~g~d~t~~~P~~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASG-EILINGVDHTASPPAERPVSM 75 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCc-eEEEcCeecCcCCcccCChhh
Confidence 5678899999742 1346889999999999999999999999999999999999 555443 5999
Q ss_pred EccCcccC-cccHHHHHhcCCC-------CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 684 VPQVSWIF-NATVRDNILFGSA-------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 684 ~~Q~~~l~-~~Tv~enI~~g~~-------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
++|+.-|| ..||++||-+|.. .+.++++.++...+|....+.+|. +|||||||||||||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 99999999 6899999999842 245678888899999999999995 7999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~-~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
+++.+|++||||||+|||.-+......+... ..++.|++||||+++.+. .+|+++++++|+|.++|+.+++....
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 9999999999999999999998887644332 335899999999999876 48999999999999999999987543
No 339
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-37 Score=335.95 Aligned_cols=170 Identities=31% Similarity=0.575 Sum_probs=157.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
++++|++++|+.. ++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4789999999643 6999999999999999999999999999999999999999999999999998765 667889999
Q ss_pred EcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEE
Q 000351 1319 IPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1397 (1623)
Q Consensus 1319 vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~IL 1397 (1623)
+||+|.+|.+ |+++|+. ||||||||++|||||+++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999886 9999973 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceE
Q 000351 1398 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1451 (1623)
Q Consensus 1398 lLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1451 (1623)
||||||++||+.+.+.+.+.|++.. ++.|+|++||+.+.+.+ ||+|++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999875 46899999999999885 999999999974
No 340
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-37 Score=337.04 Aligned_cols=172 Identities=32% Similarity=0.515 Sum_probs=159.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCC--hHHhhhce
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLRKIL 1316 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~--~~~lR~~i 1316 (1623)
|+++|++++|++ +++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....++.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998876 56778899
Q ss_pred EEEcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
+|+||+|.+|.+ |+++|+... ||||||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998742 99999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCce
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGR 1450 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1450 (1623)
++||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998754 5899999999999986 99999999985
No 341
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=5.6e-37 Score=353.10 Aligned_cols=208 Identities=28% Similarity=0.447 Sum_probs=179.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999987 34799
Q ss_pred EEcCCCcccc---ccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1318 IIPQSPVLFS---GTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1318 ~vpQdp~Lf~---gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
|+||++.++. .|+++|+......+++++.++++..++.+.+.+ ....||||||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDA-----------PMQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhC-----------ChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 388998754434456778888888887665543 23579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHHHH
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 1471 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~~l 1471 (1623)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++... ..|..+
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHH
Confidence 99999999999999999999999988653 7899999999999876 999999965 79999999998742 345554
Q ss_pred H
Q 000351 1472 V 1472 (1623)
Q Consensus 1472 ~ 1472 (1623)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 4
No 342
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=6.1e-37 Score=341.57 Aligned_cols=185 Identities=25% Similarity=0.369 Sum_probs=164.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcc--ccCCCcEEEECCEecCCCChHHh-hhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI--VELERGRILIDGFDIAKFGLMDL-RKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl--~~p~~G~I~IdG~di~~i~~~~l-R~~ 1315 (1623)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999964 3699999999999999999999999999999999999 58999999999999998876654 556
Q ss_pred eEEEcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
++|+||+|.+|++ |+++|++ . ...+||||||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999876 6665550 0 11369999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhh--ccCEEEEEeCceEeeecChhHHh
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTII--DCDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~~TvI~IaHrl~ti~--~~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999998754 789999999999998 59999999999999999 55554
No 343
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.5e-36 Score=344.41 Aligned_cols=206 Identities=28% Similarity=0.426 Sum_probs=184.7
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|+++.|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+ +..
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G-~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSG-SILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCC-EEEECCEEhHhCCHHHHhhh
Confidence 37899999999742 35799999999999999999999999999999999999999998 4332 235
Q ss_pred EEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
++|++|++.+++.|++|||.+......++..+.++..++.+.+..+|.|..+..+..+.+||||||||++||||++.+|+
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 159 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSK 159 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998766666677778888899999999999999999999999999999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 822 (1623)
++||||||++||+.+.+.+.+.+.. ..+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 160 ILVLDEATASVDPETDALIQKTIRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999999876544 345789999999999998899999999999998775
No 344
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-37 Score=341.20 Aligned_cols=221 Identities=30% Similarity=0.419 Sum_probs=194.9
Q ss_pred cEEEEEEEEEeCCCC----------------------CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCc
Q 000351 1238 SIKFEDVVLRYRPEL----------------------PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 1295 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~----------------------~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G 1295 (1623)
.|+++||++-|+++. ..-++|+||+|+.||+.-|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 489999999886431 1357899999999999999999999999999999999999999
Q ss_pred EEEECCEecCCCChHHhh----hceEEEcCCCccccc-cHHhhcCCCCC---C----CHHHHHHHHHHhcHHHHHHhccC
Q 000351 1296 RILIDGFDIAKFGLMDLR----KILGIIPQSPVLFSG-TVRFNLDPFSE---H----SDADLWEALERAHLKDAIRRNSL 1363 (1623)
Q Consensus 1296 ~I~IdG~di~~i~~~~lR----~~i~~vpQdp~Lf~g-TIr~NLd~~~~---~----sd~~i~~aL~~~~l~~~i~~lp~ 1363 (1623)
+|++||.||.+++..+|| +++++|+|...||+. ||-+|..+.-+ . ..+...++|+.+||.+|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 999999999999998874 469999999999977 99999975422 1 2344778889999988887776
Q ss_pred CcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-c
Q 000351 1364 GLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-C 1440 (1623)
Q Consensus 1364 gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~ 1440 (1623)
..||||+|||+.|||||..+|+||++|||.|+|||--...+|+-|.+.-+ .+||++|||+|++... -
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 46999999999999999999999999999999999999999999887643 6899999999999876 9
Q ss_pred CEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1441 DRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1441 DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
|||.+|++|+|+..|||+|++.++...|-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV 261 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYV 261 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHH
Confidence 99999999999999999999988765553
No 345
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-37 Score=345.21 Aligned_cols=203 Identities=24% Similarity=0.384 Sum_probs=167.8
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC----ChHHhhhc
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMDLRKI 1315 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i----~~~~lR~~ 1315 (1623)
.+ |++++|++. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.++|.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 899999753 34 99999999 99999999999999999999999999999999999998643 23456889
Q ss_pred eEEEcCCCccccc-cHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
++|+||++.+|.. |+++|+.... ...+++ ....+.++++.+ |++.........||||||||++||||++++
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 149 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLL--GLDHLLNRYPAQLSGGEKQRVALARALAAQ 149 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHc--CCHhHhhcCcccCCHHHHHHHHHHHHHhcC
Confidence 9999999999864 9999997421 111111 111223344432 455555566678999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 150 PELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999998643 7899999999999976 9999999999998875
No 346
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-37 Score=356.24 Aligned_cols=209 Identities=28% Similarity=0.420 Sum_probs=173.6
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++||+++|+++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 48999999999633 369999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEcCCCcc---ccccHHhhcCCC--C---------CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHH
Q 000351 1318 IIPQSPVL---FSGTVRFNLDPF--S---------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 1383 (1623)
Q Consensus 1318 ~vpQdp~L---f~gTIr~NLd~~--~---------~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQr 1383 (1623)
|+||+|.+ +..++++|+... . ...++.+.++++..++.+.. ......||||||||
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~~qr 150 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-----------HRQIGELSGGQKKR 150 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-----------cCCcccCCHHHHHH
Confidence 99999865 455789887521 0 01123355566666665433 23345799999999
Q ss_pred HHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1384 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1384 LaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|+++++.
T Consensus 151 v~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 151 VFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 999999999999999999999999999999999999864 47899999999999866 9999777 89999999999986
Q ss_pred h
Q 000351 1462 S 1462 (1623)
Q Consensus 1462 ~ 1462 (1623)
.
T Consensus 230 ~ 230 (272)
T PRK15056 230 T 230 (272)
T ss_pred C
Confidence 3
No 347
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-37 Score=341.28 Aligned_cols=190 Identities=26% Similarity=0.374 Sum_probs=162.3
Q ss_pred cEEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc---CCCcEEEECCEecCCCChHHh
Q 000351 1238 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDL 1312 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~---p~~G~I~IdG~di~~i~~~~l 1312 (1623)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 37899999999642 4579999999999999999999999999999999999999 89999999999998764 456
Q ss_pred hhceEEEcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhh
Q 000351 1313 RKILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 1391 (1623)
Q Consensus 1313 R~~i~~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL 1391 (1623)
|++++|+||++.+|.+ |+++|+...... . ..+....||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~------------~---------------~~~~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC------------K---------------GNEFVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh------------c---------------cccchhhCCHHHHHHHHHHHHHh
Confidence 7889999999988875 999999742110 0 12233579999999999999999
Q ss_pred cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEee-cCchhhhc-cCEEEEEeCceEeeec
Q 000351 1392 RRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIA-HRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1392 ~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~Ia-Hrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
++|+||||||||++||+++.+.+.+.|++..+ ++|+|+++ |+++.+.+ ||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998754 46766655 55677655 9999999999998765
No 348
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.4e-37 Score=363.81 Aligned_cols=203 Identities=25% Similarity=0.391 Sum_probs=170.3
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------- 677 (1623)
|+++|++++|+.+. ..++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|. +.+
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~-I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGS-VIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceE-EEECCEECCcCCHHHHHHH
Confidence 78999999996322 247999999999999999999999999999999999999999984 322
Q ss_pred cCcEEEEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 678 RGTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 678 ~~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
+.+|||++|++.++ +.||+|||.++.. .+. ++..+.++..++.+..+.. ..+|||||||||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~-----------~~~LSgGqkQRV 149 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSY-----------PSNLSGGQKQRV 149 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHH
Confidence 33699999999998 5899999987532 222 2344556666765544433 358999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
+|||||+.+|+++|||||||+||+.+.+.+.+.+.....+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 150 ~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 150 AIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999999999866554333 899999999999986 48999999999999999999987
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
..
T Consensus 230 ~~ 231 (343)
T TIGR02314 230 SH 231 (343)
T ss_pred cC
Confidence 54
No 349
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-36 Score=345.04 Aligned_cols=227 Identities=26% Similarity=0.446 Sum_probs=186.2
Q ss_pred EEEEEEEEEeCCCC--CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcccc-C----CCcEEEECCEecCCCChHH
Q 000351 1239 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-L----ERGRILIDGFDIAKFGLMD 1311 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~-p----~~G~I~IdG~di~~i~~~~ 1311 (1623)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.++|.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68899999996432 369999999999999999999999999999999999997 3 5799999999999999876
Q ss_pred hhh----ceEEEcCCCc-cccc--cHHhhcC----CCCCC-C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCC
Q 000351 1312 LRK----ILGIIPQSPV-LFSG--TVRFNLD----PFSEH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1375 (1623)
Q Consensus 1312 lR~----~i~~vpQdp~-Lf~g--TIr~NLd----~~~~~-s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~ 1375 (1623)
+|+ .|++|||||. =|+- ||.+.+. ..... + .++..+.|+.+++.+- +..+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~--------~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDP--------ERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCH--------HHHHhhCCcc
Confidence 543 6999999995 2222 5554442 11111 1 2356677777776532 1122333457
Q ss_pred CChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEe
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 1452 (1623)
Q Consensus 1376 LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1452 (1623)
||||||||+.||-||+.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999999876 47999999999999977 9999999999999
Q ss_pred eecChhHHhhcCCChHHHHHH
Q 000351 1453 EYDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1453 e~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
|.|+.+++..++...|.+..-
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll 254 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLL 254 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHH
Confidence 999999999988777765543
No 350
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.7e-37 Score=338.55 Aligned_cols=182 Identities=29% Similarity=0.469 Sum_probs=161.7
Q ss_pred cEEEEEEEEEeCCC----CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccc--cCCCcEEEECCEecCCCChHH
Q 000351 1238 SIKFEDVVLRYRPE----LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMD 1311 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~--~p~~G~I~IdG~di~~i~~~~ 1311 (1623)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 48999999999652 247999999999999999999999999999999999999 9999999999999875 36
Q ss_pred hhhceEEEcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhh
Q 000351 1312 LRKILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1312 lR~~i~~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
.|++++|+||++.+|.+ |+++|+.... . + . .||||||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~--~-----------~--------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------K--L-----------R--------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------H--h-----------c--------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 9999985210 0 0 0 6999999999999999
Q ss_pred hcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCch-hhhc-cCEEEEEeCceEeeec
Q 000351 1391 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN-TIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1391 L~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~-ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++ .+.. ||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 4799999999997 5654 9999999999998764
No 351
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=364.48 Aligned_cols=203 Identities=29% Similarity=0.423 Sum_probs=173.8
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEE
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVA 682 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ia 682 (1623)
.++++|+++.|++ ++++|+|+||+|++|++++|+|||||||||||++|+|+.+|++| .+.+. +.||
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G-~I~~~g~~i~~~~~~~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSG-EIWIGGRVVNELEPADRDIA 79 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCce-EEEECCEECCCCCHHHCCEE
Confidence 4899999999942 35799999999999999999999999999999999999999999 44433 3599
Q ss_pred EEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
||+|++.+| +.||+|||.|+.. .+. ++..++++..++.+..+..| .+|||||||||+||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 999999998 6799999998743 222 34566777778876665555 4899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|+.+|+++|||||||+||+.+.+.+.+.+.....+ |.|+|+|||+.+.+. .||+|++|++|++++.|+++++.++.
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 99999999999999999999999998876554333 899999999998765 68999999999999999999987653
No 352
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=358.06 Aligned_cols=210 Identities=23% Similarity=0.409 Sum_probs=172.0
Q ss_pred CCCCcEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------
Q 000351 610 SGLPAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------- 677 (1623)
Q Consensus 610 ~~~~~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------- 677 (1623)
.+++.|+++|++|.|+... ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.. .+
T Consensus 17 ~~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I-~i~g~~~~~~~~ 95 (320)
T PRK13631 17 SDDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTI-QVGDIYIGDKKN 95 (320)
T ss_pred CCCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeE-EECCEEcccccc
Confidence 3456799999999997421 2479999999999999999999999999999999999999999833 22
Q ss_pred -------------------cCcEEEEccCc--ccCcccHHHHHhcCCC---CCHHH----HHHHHHHhCchhHHhcCCCC
Q 000351 678 -------------------RGTVAYVPQVS--WIFNATVRDNILFGSA---FEPAR----YEKAIDVTSLQHDLDLLPGG 729 (1623)
Q Consensus 678 -------------------~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g 729 (1623)
+..|+||+|+| ++|+.||+|||.|+.. .+.+. ..+.++.+++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-------- 167 (320)
T PRK13631 96 NHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD-------- 167 (320)
T ss_pred cccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh--------
Confidence 23599999998 6888999999998732 22222 233334444321
Q ss_pred CcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchh-hhcCE
Q 000351 730 DVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFL-SQVDR 808 (1623)
Q Consensus 730 ~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l-~~~d~ 808 (1623)
...+..+.+||||||||++|||||+.+|+++||||||++||+.+.+++.+.+.....+|+|+|+|||+++++ ..||+
T Consensus 168 --~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 --SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred --hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 124556789999999999999999999999999999999999999999986655444689999999999987 46999
Q ss_pred EEEEeCCEEEEecChhHHhhcC
Q 000351 809 IILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 809 i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|++|++|++++.|+++++....
T Consensus 246 i~vl~~G~i~~~g~~~~~~~~~ 267 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEEECCEEEEeCCHHHHhcCH
Confidence 9999999999999999987654
No 353
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=8.8e-37 Score=335.24 Aligned_cols=172 Identities=29% Similarity=0.473 Sum_probs=156.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh-HHhhhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~-~~lR~~i 1316 (1623)
.|+++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 38999999998 8999999999999999999999999999999999999999999999999988764 4567889
Q ss_pred EEEcCCC---ccc-cccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1317 GIIPQSP---VLF-SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1317 ~~vpQdp---~Lf-~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
+|+||++ .++ ..|+++|+..... ||||||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 344 5699999864210 99999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceE
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 1451 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1451 (1623)
+|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999864 47899999999999987 999999999975
No 354
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.5e-36 Score=340.20 Aligned_cols=205 Identities=35% Similarity=0.591 Sum_probs=180.1
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.++++|+++.|+.. ++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++| .+.+. ..
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G-~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSG-SVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC-eEEECCEEhHHCCHHHHHhh
Confidence 37899999999632 35799999999999999999999999999999999999999998 44332 25
Q ss_pred EEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
++|++|+++++..|++||+.++.. .+.++..+.++.+++.+.++..|.|.+|.+.....+||||||||++||||+..+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999988899999987643 3455667788889999889999999999998889999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEec
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g 821 (1623)
+++||||||++||+.+.+.+++.+.. ..+++|+|++||+++++..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999886554 33458999999999998889999999999998654
No 355
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=346.76 Aligned_cols=200 Identities=29% Similarity=0.441 Sum_probs=165.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------c
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------------R 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----------------~ 678 (1623)
++++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+ +
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~-i~~~g~~~~~~~~~~~~~~~ 76 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGE-VLIDGEDISGLSEAELYRLR 76 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceE-EEECCEEccccChhhHHHHh
Confidence 468999999963 57999999999999999999999999999999999999999984 322 2
Q ss_pred CcEEEEccCcccCc-ccHHHHHhcCCC----CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 679 GTVAYVPQVSWIFN-ATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~-~Tv~enI~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
..|+|++|++.++. .||+||+.++.. .+. ++..++++.+++.+..+ ....+|||||||||
T Consensus 77 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv 145 (235)
T cd03261 77 RRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-----------LYPAELSGGMKKRV 145 (235)
T ss_pred cceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 35999999999886 599999987521 222 23444556666544332 23358999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
+||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|+|||+++++. .||+|++|++|++++.|+++++.
T Consensus 146 ~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 146 ALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 999999999999999999999999999999886655433 3899999999999876 48999999999999999998876
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
..
T Consensus 226 ~~ 227 (235)
T cd03261 226 AS 227 (235)
T ss_pred CC
Confidence 43
No 356
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.9e-36 Score=350.43 Aligned_cols=211 Identities=18% Similarity=0.259 Sum_probs=175.4
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhcc--ccCCCcEEEECCEecCCCChHHhhh-
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI--VELERGRILIDGFDIAKFGLMDLRK- 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl--~~p~~G~I~IdG~di~~i~~~~lR~- 1314 (1623)
.|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+....++
T Consensus 7 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNEN--EILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCCE--EeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 39999999999643 699999999999999999999999999999999998 6899999999999999887766554
Q ss_pred ceEEEcCCCccccc-cHHhhcCCCCC----------CC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCC-CCCh
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDPFSE----------HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGE-NFSV 1378 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~~~~----------~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~-~LSg 1378 (1623)
.++++||++.+|++ |+++|+..... .. .+.+.++++.+++.+ +..+.... .|||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~~LSg 154 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDP----------SFLSRNVNEGFSG 154 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCch----------hhhccccccCCCH
Confidence 48999999999986 88998753210 01 112333444443321 22333333 5999
Q ss_pred hHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc--cCEEEEEeCceEeeec
Q 000351 1379 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID--CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1379 GQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~G 1455 (1623)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 155 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~ 234 (252)
T CHL00131 155 GEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTG 234 (252)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47999999999999875 8999999999999999
Q ss_pred ChhHH
Q 000351 1456 TPEEL 1460 (1623)
Q Consensus 1456 tp~eL 1460 (1623)
+++++
T Consensus 235 ~~~~~ 239 (252)
T CHL00131 235 DAELA 239 (252)
T ss_pred Chhhh
Confidence 99843
No 357
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=9.2e-37 Score=315.87 Aligned_cols=195 Identities=25% Similarity=0.453 Sum_probs=171.3
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE---------------Ec
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 678 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~---------------~~ 678 (1623)
.|+|+||++.|+. ++++|+||||+|++||++-|+||||||||||||+|.|+..|+.|.... .+
T Consensus 1 mI~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LR 78 (223)
T COG2884 1 MIRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLR 78 (223)
T ss_pred CeeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhh
Confidence 3789999999986 478999999999999999999999999999999999999999994321 34
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.+||+|+|+.-|. +.||.||+.|... .. .++..++++..+|.+....+|. .|||||||||+
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRva 147 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVA 147 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHH
Confidence 5799999999875 7899999998632 12 2566778999999999999995 79999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhc-CEEEEEeCCEEEEec
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV-DRIILVHEGMVKEEG 821 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~-d~i~~l~~G~i~~~g 821 (1623)
||||+..+|++||-||||-.|||..+..|++.+-.....|.||+++|||.+.++.+ -+++.+++|+++...
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999999999999999985544556799999999999999876 799999999998643
No 358
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=7.3e-37 Score=343.13 Aligned_cols=193 Identities=24% Similarity=0.366 Sum_probs=162.5
Q ss_pred EEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh----HHhhhce
Q 000351 1241 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL----MDLRKIL 1316 (1623)
Q Consensus 1241 ~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~----~~lR~~i 1316 (1623)
++||+++|++ +++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999964 369999999999999999999999999999999999999999999999999765542 2457789
Q ss_pred EEEcCCCcccc-ccHHhhcCCCC---CC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSPVLFS-GTVRFNLDPFS---EH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp~Lf~-gTIr~NLd~~~---~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+|+||++.+|. .|+++|+.... .. .++++.++++..++.+ .......+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNL-----------KLKQKIYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchh-----------hhcCChhhCCHHHHHHHHHHH
Confidence 99999999997 59999996421 11 1233455555555433 333445679999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEE
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLL 1446 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl 1446 (1623)
||+++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999865 478999999999987779999986
No 359
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.2e-36 Score=333.69 Aligned_cols=177 Identities=33% Similarity=0.532 Sum_probs=159.9
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEE
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 1319 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~v 1319 (1623)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 3699999999999999999999999999999999999999999999999999988888888899999
Q ss_pred cCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEE
Q 000351 1320 PQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVL 1399 (1623)
Q Consensus 1320 pQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlL 1399 (1623)
|| +++.+++.+++. ....+||||||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~-----------~~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLAD-----------RPFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 566666655443 33467999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1400 DEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1400 DEpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999998754 7899999999999865 9999999999998754
No 360
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=326.03 Aligned_cols=201 Identities=26% Similarity=0.450 Sum_probs=170.5
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------- 677 (1623)
..|+++|++..|++ ++.+|+||||+|++||+++|+|++||||||||++|.|..+|++| .+..
T Consensus 2 ~~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G-~i~~~g~~i~~~~~k~lr~ 78 (258)
T COG3638 2 MMIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSG-EILFNGVQITKLKGKELRK 78 (258)
T ss_pred ceEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcc-eEEecccchhccchHHHHH
Confidence 46999999999974 57899999999999999999999999999999999999999999 4332
Q ss_pred -cCcEEEEccCcccC-cccHHHHHhcCCC------------CCHHHHHH---HHHHhCchhHHhcCCCCCcccccCCCCc
Q 000351 678 -RGTVAYVPQVSWIF-NATVRDNILFGSA------------FEPARYEK---AIDVTSLQHDLDLLPGGDVTEIGERGVN 740 (1623)
Q Consensus 678 -~~~iay~~Q~~~l~-~~Tv~enI~~g~~------------~~~~~~~~---~~~~~~l~~~~~~l~~g~~t~ig~~g~~ 740 (1623)
+.+|||++|++-|. ..||.+|++.|.- +.++.... +++..++.+..- .+..+
T Consensus 79 ~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~ 147 (258)
T COG3638 79 LRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRAST 147 (258)
T ss_pred HHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhcc
Confidence 33699999999985 7899999998742 23333333 344455544322 34468
Q ss_pred cChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEE
Q 000351 741 ISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVK 818 (1623)
Q Consensus 741 LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~-~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~ 818 (1623)
|||||+|||+|||||+++|+|+|-|||+++|||.+++++++.+.+. ...|.|+|+.-|++++.. +||||+-|++|+|+
T Consensus 148 LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv 227 (258)
T COG3638 148 LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV 227 (258)
T ss_pred CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE
Confidence 9999999999999999999999999999999999999999987764 446899999999999865 69999999999999
Q ss_pred EecChhHHh
Q 000351 819 EEGTFEDLS 827 (1623)
Q Consensus 819 ~~g~~~~l~ 827 (1623)
.+|+.+|+.
T Consensus 228 fDg~~~el~ 236 (258)
T COG3638 228 FDGPASELT 236 (258)
T ss_pred EeCChhhhh
Confidence 999999864
No 361
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=336.68 Aligned_cols=181 Identities=25% Similarity=0.385 Sum_probs=160.0
Q ss_pred cEEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccc--cCCCcEEEECCEecCCCChHHhh
Q 000351 1238 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDLR 1313 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~--~p~~G~I~IdG~di~~i~~~~lR 1313 (1623)
.|+++|++++|++. .+++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 48999999999642 246999999999999999999999999999999999986 489999999999985 5678
Q ss_pred hceEEEcCCCccccc-cHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1314 KILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1314 ~~i~~vpQdp~Lf~g-TIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
++++|+||++.+|.+ |+++|+... ..++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998631 0000 699999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh-h-hccCEEEEEeC-ceEeeec
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-I-IDCDRILLLDS-GRVLEYD 1455 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~-G~ive~G 1455 (1623)
+|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999865 47999999999984 5 45999999999 9999876
No 362
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=360.31 Aligned_cols=203 Identities=27% Similarity=0.399 Sum_probs=171.7
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcE
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTV 681 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~i 681 (1623)
+.|+++|+++.|++ +++|+|+||+|++||+++|+|||||||||||++|+|+.+|++| .+.+. ++|
T Consensus 5 ~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G-~I~~~g~~i~~~~~~~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEG-QIFIDGEDVTHRSIQQRDI 80 (351)
T ss_pred cEEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCce-EEEECCEECCCCCHHHCCE
Confidence 46999999999963 5699999999999999999999999999999999999999999 44432 469
Q ss_pred EEEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 682 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 682 ay~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
|||+|++.+| +.||+|||.|+.. .+. ++.+++++..++.+..+.. ..+|||||||||+|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 9999999998 5799999998743 222 3445566666665444333 3589999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||+.+|+++|||||||+||+.+.+++.+.+..... .|+|+|+|||+.+++ ..||+|++|++|+|++.|+++++..+.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999886655433 389999999999987 468999999999999999999987653
No 363
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-36 Score=324.46 Aligned_cols=205 Identities=29% Similarity=0.424 Sum_probs=172.2
Q ss_pred CcEEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------
Q 000351 613 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------- 678 (1623)
..++++|+++.|+... ..++++||||+|.+||.++|+|++|||||||.++|+|..+|++| .+.+.
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G-~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSG-SILLDGKPLAPKKRAKAF 80 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCc-eEEECCcccCccccchhh
Confidence 3689999999998521 11599999999999999999999999999999999999999999 44433
Q ss_pred -CcEEEEccCccc---CcccHHHHHhcCC-----CCCHHHHHHHHHHhCchhH-HhcCCCCCcccccCCCCccChHHHHH
Q 000351 679 -GTVAYVPQVSWI---FNATVRDNILFGS-----AFEPARYEKAIDVTSLQHD-LDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 679 -~~iay~~Q~~~l---~~~Tv~enI~~g~-----~~~~~~~~~~~~~~~l~~~-~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+.|-+|+|+|.- ...||++-|.=+. +-.+++..++++..+|.+. ++..|+ .|||||+||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QR 149 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQR 149 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHH
Confidence 358999999974 3468888875321 1223557788888888765 456664 799999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhh-hcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHH
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG-ELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~-~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 826 (1623)
|||||||..+|+++|||||||+||+.+...|++.+... ..+|-|.|+||||+..+.+ ||||+||++|+|+|.++.+++
T Consensus 150 iaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l 229 (252)
T COG1124 150 IAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEEL 229 (252)
T ss_pred HHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhh
Confidence 99999999999999999999999999999999866653 3347899999999999876 899999999999999999998
Q ss_pred hhc
Q 000351 827 SNN 829 (1623)
Q Consensus 827 ~~~ 829 (1623)
...
T Consensus 230 ~~~ 232 (252)
T COG1124 230 LSH 232 (252)
T ss_pred hcC
Confidence 865
No 364
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.9e-36 Score=325.76 Aligned_cols=164 Identities=33% Similarity=0.427 Sum_probs=150.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEE
Q 000351 1319 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 1398 (1623)
Q Consensus 1319 vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILl 1398 (1623)
+||++.++++|+++|+... ....||||||||++||||++++|++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999989999999642 135799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhccCEEEEEeCce
Q 000351 1399 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGR 1450 (1623)
Q Consensus 1399 LDEpTS~LD~~Te~~Iq~~L~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1450 (1623)
|||||++||+++.+.+.+.|++. ++|+|+|||+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999986 689999999998877799999998753
No 365
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.4e-36 Score=346.82 Aligned_cols=205 Identities=25% Similarity=0.404 Sum_probs=173.3
Q ss_pred EEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEE
Q 000351 1240 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 1319 (1623)
Q Consensus 1240 ~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~v 1319 (1623)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+++.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 56778774 27999999999999999999999999999999999985 599999999999988888888899999
Q ss_pred cCCCcc-ccccHHhhcCCCCCC--C----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1320 PQSPVL-FSGTVRFNLDPFSEH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1320 pQdp~L-f~gTIr~NLd~~~~~--s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
||++.+ +..|+++|+..+... + ++++.++++.. |++.........||||||||++|||||+.
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 143 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEAL-----------GLDDKLGRSVNQLSGGEWQRVRLAAVVLQ 143 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHc-----------CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999854 467999999754211 1 12233444443 44444445567899999999999999997
Q ss_pred -------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1393 -------RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1393 -------~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 144 ~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 144 VWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999999875 47899999999998866 99999999999999999988764
No 366
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.4e-35 Score=395.37 Aligned_cols=211 Identities=25% Similarity=0.326 Sum_probs=150.9
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHH---------HhhccccCCC----c----EEEEC
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLN---------TLFRIVELER----G----RILID 1300 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~---------lL~rl~~p~~----G----~I~Id 1300 (1623)
.++++|++. ..|+|+||+|++||.+||.|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 488888862 3799999999999999999999999999999 5555432211 1 24555
Q ss_pred CEecCCCCh----H------Hhh---------hceE-----EEcCC------------------C---------------
Q 000351 1301 GFDIAKFGL----M------DLR---------KILG-----IIPQS------------------P--------------- 1323 (1623)
Q Consensus 1301 G~di~~i~~----~------~lR---------~~i~-----~vpQd------------------p--------------- 1323 (1623)
-.++..-+. . ++| ++.+ +.+|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 544433211 1 344 1111 12221 0
Q ss_pred -----ccccc-cHHhhcCCCCC------CCHHHHHHHHHHhcHHHHHHhccCCcchh-hhcCCCCCChhHHHHHHHHHhh
Q 000351 1324 -----VLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQ-VSEAGENFSVGQRQLLSLSRAL 1390 (1623)
Q Consensus 1324 -----~Lf~g-TIr~NLd~~~~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~-v~e~G~~LSgGQrQrLaLARAL 1390 (1623)
+.+.+ ||.|||++... .+.+++.+.+ +.++. .|++.. .++...+||||||||++|||||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~--vGL~~l~l~q~~~tLSGGE~QRV~LAraL 824 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCS--LGLDYLPLGRPLSSLSGGEIQRLKLAYEL 824 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHH--cCCcchhhcCccccCCHHHHHHHHHHHHH
Confidence 13333 67777654211 0112222222 12222 367664 6777789999999999999999
Q ss_pred h---cCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEEe------CceEeeecChhHH
Q 000351 1391 L---RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLD------SGRVLEYDTPEEL 1460 (1623)
Q Consensus 1391 L---~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~------~G~ive~Gtp~eL 1460 (1623)
+ ++|++|||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|. +|++++.|+|+++
T Consensus 825 ~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel 904 (1809)
T PRK00635 825 LAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEEL 904 (1809)
T ss_pred hhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHH
Confidence 8 5999999999999999999999999999865 4789999999999997799999996 7999999999999
Q ss_pred hhc
Q 000351 1461 LSN 1463 (1623)
Q Consensus 1461 l~~ 1463 (1623)
...
T Consensus 905 ~~~ 907 (1809)
T PRK00635 905 IHL 907 (1809)
T ss_pred Hhc
Confidence 853
No 367
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.8e-36 Score=342.90 Aligned_cols=205 Identities=25% Similarity=0.368 Sum_probs=167.6
Q ss_pred cccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC----CCcEEEECCEecCCCChHHhhhceEEEcCCCc-cc-c-
Q 000351 1255 VLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----ERGRILIDGFDIAKFGLMDLRKILGIIPQSPV-LF-S- 1327 (1623)
Q Consensus 1255 vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p----~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~-Lf-~- 1327 (1623)
+|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 34 3
Q ss_pred ccHHhhcCC----CCCC---CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEe
Q 000351 1328 GTVRFNLDP----FSEH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLD 1400 (1623)
Q Consensus 1328 gTIr~NLd~----~~~~---sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLD 1400 (1623)
.|+.+|+.. .... .++++.++++..++.+. ++.......+||||||||++||||++++|+|||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488888742 1111 12234555555444310 13445556789999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCChHH
Q 000351 1401 EATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 1469 (1623)
Q Consensus 1401 EpTS~LD~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~~f~ 1469 (1623)
|||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++...+...|.
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 222 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETT 222 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHH
Confidence 99999999999999999998753 7899999999999976 999999999999999999999865444333
No 368
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=4.2e-36 Score=346.84 Aligned_cols=218 Identities=19% Similarity=0.287 Sum_probs=168.8
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccc--cCCCcEEEECCEecCCCChHHhh-hc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDLR-KI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~--~p~~G~I~IdG~di~~i~~~~lR-~~ 1315 (1623)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...++...+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 36999999999999999999999999999999999995 69999999999999888776654 56
Q ss_pred eEEEcCCCccccc-cHHhhcCCC-CCCCHHHHHHHHHHhcH----HHHHHhccCCcc-hhhhcCC-CCCChhHHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPF-SEHSDADLWEALERAHL----KDAIRRNSLGLD-AQVSEAG-ENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~-~~~sd~~i~~aL~~~~l----~~~i~~lp~gLd-t~v~e~G-~~LSgGQrQrLaLA 1387 (1623)
++|+||++.++.. |..+++... .........+.++..++ .+.++.+ +++ ....... ..||||||||++||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~qrv~la 157 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALL--KMPEDLLTRSVNVGFSGGEKKRNDIL 157 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHc--CCChhhcccCCCCCCCHHHHHHHHHH
Confidence 9999999987764 544443210 00000000000111111 2222221 221 1112222 36999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhc--cCEEEEEeCceEeeecChhHH
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~~-~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 158 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 158 QMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 999999999999999999999999999999988654 6899999999999987 899999999999999998854
No 369
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-36 Score=315.63 Aligned_cols=212 Identities=27% Similarity=0.463 Sum_probs=185.4
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+.+|+|++-... .+|+++||+++|||.+||+||||||||||++.|.|.+.|++|++.++|++++++++.++-++-++
T Consensus 2 i~a~nls~~~~Gr--~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAGR--RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeecc--eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 7889998887543 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcc-ccccHHhhcC----CCCC---CCHHH--HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1319 IPQSPVL-FSGTVRFNLD----PFSE---HSDAD--LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1319 vpQdp~L-f~gTIr~NLd----~~~~---~sd~~--i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
.||+..+ |+-|++|-+. |++. ..+++ ..+++.++++..+-.+. -..||||||||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----------y~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRD-----------YRTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccc-----------hhhcCchHHHHHHHHH
Confidence 9999975 8889998764 4422 22333 56778888876654432 2469999999999999
Q ss_pred hhhc------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHH
Q 000351 1389 ALLR------RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1389 ALL~------~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eL 1460 (1623)
.|.+ ++++|+||||||+||..-...+.+..|+.. .++.|++|-|+|+.... ||||++|.+|||+..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9986 346999999999999999999999999876 57899999999998766 999999999999999999999
Q ss_pred hhc
Q 000351 1461 LSN 1463 (1623)
Q Consensus 1461 l~~ 1463 (1623)
+..
T Consensus 229 lt~ 231 (259)
T COG4559 229 LTD 231 (259)
T ss_pred cCH
Confidence 864
No 370
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=348.81 Aligned_cols=205 Identities=27% Similarity=0.403 Sum_probs=172.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|++++|++...+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+ +..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESG-QIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-EEEECCEECCcCcHHHHHhh
Confidence 58999999999743235699999999999999999999999999999999999999998 4332 235
Q ss_pred EEEEccCcc--cCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 681 VAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 681 iay~~Q~~~--l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
++|++|+|. ++..||+|||.|+.. .++ ++..++++..++.+..+..| .+||||||||++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~l 151 (279)
T PRK13650 83 IGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAI 151 (279)
T ss_pred ceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 899999984 567899999998632 222 34566777778765555443 5899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|||++.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+..||+|++|++|++++.|+.+++....
T Consensus 152 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 152 AGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 9999999999999999999999999999876554433 389999999999998889999999999999999998876553
No 371
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.3e-37 Score=308.62 Aligned_cols=196 Identities=27% Similarity=0.428 Sum_probs=170.5
Q ss_pred EeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCccc
Q 000351 1247 RYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF 1326 (1623)
Q Consensus 1247 ~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf 1326 (1623)
.|.....++|+|+||++.+||.++|.||||||||||++.+.-+..|++|+++..|.|+++++++.+|++++||-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 45444558999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHhhcC-CCC---C-CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeC
Q 000351 1327 SGTVRFNLD-PFS---E-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 1401 (1623)
Q Consensus 1327 ~gTIr~NLd-~~~---~-~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDE 1401 (1623)
.+||.+||- |+. . .+...-.+-|+++++. ++.+..+..+||||||||++|+|-|.--|+||+|||
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~----------~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE 159 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALP----------DSILTKNITELSGGEKQRIALIRNLQFMPKILLLDE 159 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCc----------hhhhcchhhhccchHHHHHHHHHHhhcCCceEEecC
Confidence 999999996 442 1 2223333344444433 345556677899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchh-hhccCEEEEEeCceEe
Q 000351 1402 ATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNT-IIDCDRILLLDSGRVL 1452 (1623)
Q Consensus 1402 pTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~t-i~~~DrI~Vl~~G~iv 1452 (1623)
+||+||+.+.+.|.+.|.+++ ++..++.|||+-+. +..+|+++-+..|++-
T Consensus 160 ~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~ 213 (223)
T COG4619 160 ITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAG 213 (223)
T ss_pred chhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCccc
Confidence 999999999999999999988 46899999999998 6779999999998763
No 372
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.4e-36 Score=362.38 Aligned_cols=227 Identities=27% Similarity=0.465 Sum_probs=190.6
Q ss_pred cEEEEEEEEEeCCCCC--CcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCC----CcEEEECCEecCCCChHH
Q 000351 1238 SIKFEDVVLRYRPELP--PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE----RGRILIDGFDIAKFGLMD 1311 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~--~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~----~G~I~IdG~di~~i~~~~ 1311 (1623)
-++++|++..|..... ++++||||+|.+||.+||||.|||||||+.++|.|++++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999964432 5999999999999999999999999999999999999987 899999999999998876
Q ss_pred hh----hceEEEcCCCc-cccc--cHHhhcC----CCCCC----CHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCC
Q 000351 1312 LR----KILGIIPQSPV-LFSG--TVRFNLD----PFSEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1312 lR----~~i~~vpQdp~-Lf~g--TIr~NLd----~~~~~----sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~L 1376 (1623)
.| ++|++|||||. .++- ||.+.+. ..... ..++..+.|+.+++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 64 36999999996 5543 7766553 11111 23446666777766443222 2234689
Q ss_pred ChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1377 SgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
|||||||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .|.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999876 57899999999999988 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHHH
Q 000351 1454 YDTPEELLSNEGSSFSKMVQ 1473 (1623)
Q Consensus 1454 ~Gtp~eLl~~~~~~f~~l~~ 1473 (1623)
.|+++++++++...|.+..-
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll 255 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLL 255 (539)
T ss_pred ecCHHHHHhccCCcccHHHH
Confidence 99999999988777766553
No 373
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.3e-36 Score=359.01 Aligned_cols=204 Identities=29% Similarity=0.427 Sum_probs=173.9
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------Cc
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GT 680 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ 680 (1623)
.+.++++|++++|++ +++|+|+||++++||+++|+|||||||||||++|+|+.+|++| .+.+. ..
T Consensus 12 ~~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G-~I~~~g~~i~~~~~~~r~ 87 (375)
T PRK09452 12 SPLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSG-RIMLDGQDITHVPAENRH 87 (375)
T ss_pred CceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCce-EEEECCEECCCCCHHHCC
Confidence 346999999999963 5699999999999999999999999999999999999999998 44332 35
Q ss_pred EEEEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 VAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 iay~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
|||++|++.+| ..||+|||.|+.. .+. ++..++++..++.+.++..| .+|||||||||+||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHH
Confidence 99999999998 5699999998743 122 34556677777776666555 48999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|||+.+|+++|||||||+||+.+.+.+.+.+..... .|.|+|+||||.+++. .||+|++|++|+|++.|+++++..+.
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999886655433 3899999999999864 69999999999999999999987653
No 374
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-36 Score=350.11 Aligned_cols=206 Identities=28% Similarity=0.464 Sum_probs=169.1
Q ss_pred cEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------
Q 000351 614 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------- 677 (1623)
.++++|+++.|+... ++++|+||||+|++||+++|+||||||||||+++|+|.++|++|. +.+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~-i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGK-IIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccE-EEECCEECCCcCccHHH
Confidence 378999999997422 247999999999999999999999999999999999999999983 322
Q ss_pred -cCcEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 678 -RGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 678 -~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
+..|||++|+| .+++.||+|||.|+.. .+. ++..++++.+++.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 23599999998 5678999999998631 232 23455666666641 01123445689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhH
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 825 (1623)
|++|||||+.+|+++||||||++||+.+.+++++.+..... .|+|+|++||+++++. .||+|++|++|+++++|+.++
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999886554333 3899999999999875 699999999999999999998
Q ss_pred Hhhc
Q 000351 826 LSNN 829 (1623)
Q Consensus 826 l~~~ 829 (1623)
+.+.
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8654
No 375
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=8.1e-36 Score=332.94 Aligned_cols=194 Identities=24% Similarity=0.343 Sum_probs=167.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++|
T Consensus 1 l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDGR--ALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCCc--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 4789999999643 6999999999999999999999999999999999999999999999999987643 567889999
Q ss_pred EcCCCccc-cccHHhhcCCCC-CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcE
Q 000351 1319 IPQSPVLF-SGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 1396 (1623)
Q Consensus 1319 vpQdp~Lf-~gTIr~NLd~~~-~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~I 1396 (1623)
+||++.++ ..|+++|+..+. ...++++.++++..++.++..+ ...+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDR-----------PVAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhcC-----------chhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 469999997543 2356677777888777644322 2357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEE
Q 000351 1397 LVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 1446 (1623)
Q Consensus 1397 LlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl 1446 (1623)
|||||||++||+.+.+.+.+.|++.. +++|+|+|||+...+.. ||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998764 47999999998877655 9999877
No 376
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.6e-36 Score=358.26 Aligned_cols=203 Identities=29% Similarity=0.418 Sum_probs=172.5
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcE
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTV 681 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~i 681 (1623)
..++++|++++|++ +.+|+|+||++++|++++|+|||||||||||++|+|+.+|++| .+.+. +.|
T Consensus 3 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G-~I~i~g~~~~~~~~~~r~i 78 (353)
T TIGR03265 3 PYLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAG-TIYQGGRDITRLPPQKRDY 78 (353)
T ss_pred cEEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCce-EEEECCEECCCCCHHHCCE
Confidence 35899999999963 5699999999999999999999999999999999999999998 44432 359
Q ss_pred EEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 682 AYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 682 ay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
|||+|++.+| ..||+|||.|+.. .+ .++.+++++..+|.+..+. ...+|||||||||+|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~-----------~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERK-----------YPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhC-----------ChhhCCHHHHHHHHHHH
Confidence 9999999998 5799999998732 22 2345566666666554443 34589999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||+.+|+++|||||||+||+.+.+++.+.+.....+ |.|+|+|||+.+++. .||+|++|++|++++.|+++++.++.
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999998876654333 899999999999865 58999999999999999999998653
No 377
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-35 Score=376.41 Aligned_cols=212 Identities=25% Similarity=0.393 Sum_probs=182.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhh-hce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR-KIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR-~~i 1316 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 4999999999964 3699999999999999999999999999999999999999999999999999887776655 469
Q ss_pred EEEcCCCccccc-cHHhhcCCCCCCC---HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFSEHS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~~~s---d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
+|+||++.+|.. |+++|+....... ++++.++++..++ +........+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGC-----------QLDLDSSAGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCC-----------CccccCChhhCCHHHHHHHHHHHHHHc
Confidence 999999998876 9999997532211 2334444544443 333344456799999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999999864 47899999999999876 99999999999999999998764
No 378
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4.4e-36 Score=343.45 Aligned_cols=195 Identities=27% Similarity=0.406 Sum_probs=158.4
Q ss_pred CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEc-CCCccc-cccH
Q 000351 1253 PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIP-QSPVLF-SGTV 1330 (1623)
Q Consensus 1253 ~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vp-Qdp~Lf-~gTI 1330 (1623)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ....|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 3699999999999999999999999999999999999999999999999987653 346778899997 667776 4599
Q ss_pred HhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCC
Q 000351 1331 RFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVD 1407 (1623)
Q Consensus 1331 r~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD 1407 (1623)
++|+.... ..+.++..+.+ .+.++. .|++.........||||||||++|||||+.+|+||||||||++||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~--~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRL-----DELSEL--LDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHH-----HHHHHH--cCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 99985321 22233222211 122222 134333333446799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC--CcEEEEeecCchhhhc-cCEEEEEeCceEeeec
Q 000351 1408 VRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1408 ~~Te~~Iq~~L~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~G 1455 (1623)
+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998743 6899999999999876 9999999999998765
No 379
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=340.67 Aligned_cols=200 Identities=31% Similarity=0.465 Sum_probs=165.7
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEE
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVA 682 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ia 682 (1623)
.++++|+++.|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++| .+.+. ..++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSG-TILFGGEDATDVPVQERNVG 77 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCEECCcCCccccceE
Confidence 3789999999963 5799999999999999999999999999999999999999998 43332 3599
Q ss_pred EEccCcccC-cccHHHHHhcCCCC-------CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGSAF-------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~~~-------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
|++|+|.++ +.||+||+.++... +. ++..+.++..++.+..+ ....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLAD-----------RYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHH
Confidence 999999887 57999999876321 21 22344455555543333 334689999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||||++.+|+++||||||++||+++.+.+.+.+.....+ |+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 999999999999999999999999999998865543333 899999999999875 589999999999999999988754
No 380
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=349.49 Aligned_cols=204 Identities=25% Similarity=0.438 Sum_probs=168.8
Q ss_pred EEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------
Q 000351 615 ISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------- 677 (1623)
|+++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|. +.+
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~-i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGK-VTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcE-EEECCEECccccccccHH
Confidence 78999999997421 136999999999999999999999999999999999999999983 322
Q ss_pred --cCcEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 678 --RGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 678 --~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
+..|+|++|+| .+++.||.|||.|+.. .+. +++.++++..++.+++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 23589999998 6888899999998732 222 2455556666664322 1234468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhH
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 825 (1623)
||++|||||+.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++. .||+|++|++|+++++|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999998865443345899999999999885 599999999999999999999
Q ss_pred Hhhc
Q 000351 826 LSNN 829 (1623)
Q Consensus 826 l~~~ 829 (1623)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8654
No 381
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=9.2e-36 Score=320.88 Aligned_cols=159 Identities=30% Similarity=0.538 Sum_probs=148.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH-HhhhceE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKILG 1317 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~-~lR~~i~ 1317 (1623)
|+++|++++|++. ++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5789999999643 699999999999999999999999999999999999999999999999999887764 4677899
Q ss_pred EEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEE
Q 000351 1318 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 1397 (1623)
Q Consensus 1318 ~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~IL 1397 (1623)
|+|| ||||||||++||||++++|+||
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1398 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1398 lLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
+|||||++||+++.+.+.+.|++.. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999874 47899999999998876 99999999999975
No 382
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.8e-36 Score=359.01 Aligned_cols=190 Identities=24% Similarity=0.370 Sum_probs=160.8
Q ss_pred CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-----------------cCcEEEEccCcccC
Q 000351 629 ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-----------------RGTVAYVPQVSWIF 691 (1623)
Q Consensus 629 ~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-----------------~~~iay~~Q~~~l~ 691 (1623)
++++|+|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+ +..|+||+|++++|
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G-~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~ 83 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAG-QIFIDGENIMKQSPVELREVRRKKIGMVFQQFALF 83 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCce-EEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCC
Confidence 35799999999999999999999999999999999999999998 3332 34699999999998
Q ss_pred c-ccHHHHHhcCCCC---CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEE
Q 000351 692 N-ATVRDNILFGSAF---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFI 763 (1623)
Q Consensus 692 ~-~Tv~enI~~g~~~---~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ill 763 (1623)
+ .||+|||.|+..+ +. ++..+.++..+|....+. ...+|||||||||+|||||+.+|+|+|
T Consensus 84 ~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~-----------~p~~LSGGq~QRV~lARAL~~~p~iLL 152 (363)
T TIGR01186 84 PHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHR-----------YPDELSGGMQQRVGLARALAAEPDILL 152 (363)
T ss_pred CCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhC-----------ChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 5 6999999986432 22 334455566666544443 445899999999999999999999999
Q ss_pred EeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 764 FDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 764 LDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||||||+||+.+++++.+.+..... .|+|+|+|||+++++ ..||+|++|++|++++.|+++++..+.
T Consensus 153 lDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 153 MDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 9999999999999999998776543 489999999999986 458999999999999999999987653
No 383
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=349.94 Aligned_cols=206 Identities=29% Similarity=0.461 Sum_probs=168.9
Q ss_pred cEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE---------------
Q 000351 614 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 676 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~--------------- 676 (1623)
.|+++|++++|+... +.++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|....
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999997421 136999999999999999999999999999999999999999984321
Q ss_pred ---------------------EcCcEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcC
Q 000351 677 ---------------------IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLL 726 (1623)
Q Consensus 677 ---------------------~~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l 726 (1623)
.+..||||+|+| .++..||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~--- 158 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY--- 158 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh---
Confidence 023489999986 5678899999998731 222 3345566666664221
Q ss_pred CCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-h
Q 000351 727 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-Q 805 (1623)
Q Consensus 727 ~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~ 805 (1623)
......+||||||||++|||||+.+|+++||||||++||+...+.+.+.+......|+|+|+|||+++++. .
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 12344689999999999999999999999999999999999999998866544445899999999999864 6
Q ss_pred cCEEEEEeCCEEEEecChhHHhhc
Q 000351 806 VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 806 ~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||+|++|++|++++.|+.+++...
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998654
No 384
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=377.87 Aligned_cols=215 Identities=22% Similarity=0.365 Sum_probs=179.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC--CCcEEEECCEecCCCChHH-hhh
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMD-LRK 1314 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p--~~G~I~IdG~di~~i~~~~-lR~ 1314 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.++|.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999964 3699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ceEEEcCCCccccc-cHHhhcCCCCC------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHH
Q 000351 1315 ILGIIPQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 1387 (1623)
Q Consensus 1315 ~i~~vpQdp~Lf~g-TIr~NLd~~~~------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLA 1387 (1623)
+++||||+|.+|.. |+++|+..... .+.++..+ .+.++++.+ |++........+||||||||++||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la 155 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEIA 155 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHHH
Confidence 79999999988875 99999974321 12111111 122333332 343333444567999999999999
Q ss_pred HhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1388 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1388 RALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
|||+.+|+|||||||||+||+.+...+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 99999999999999999999999999999998864 47899999999999976 9999999999999999998864
No 385
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.1e-35 Score=340.78 Aligned_cols=199 Identities=23% Similarity=0.390 Sum_probs=163.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------cCc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------RGT 680 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~~~ 680 (1623)
++++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+ +..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 76 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGS-VLFDGEDITGLPPHEIARLG 76 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCce-EEECCEECCCCCHHHHHhcC
Confidence 468999999963 56999999999999999999999999999999999999999983 322 134
Q ss_pred EEEEccCcccCc-ccHHHHHhcCCCC-------------CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccC
Q 000351 681 VAYVPQVSWIFN-ATVRDNILFGSAF-------------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 681 iay~~Q~~~l~~-~Tv~enI~~g~~~-------------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
++|++|++.++. .||+|||.++... +. ++..+.++..++.+ ..+....+||
T Consensus 77 i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS 145 (236)
T cd03219 77 IGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-----------LADRPAGELS 145 (236)
T ss_pred EEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-----------hhhCChhhCC
Confidence 999999999875 5999999875321 01 12233334444322 2344557899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 821 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 821 (1623)
||||||++||||++.+|+++||||||++||+.+.+++++.+.....+|+|+|++||+++++.. ||+|++|++|++++.|
T Consensus 146 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~ 225 (236)
T cd03219 146 YGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEG 225 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeec
Confidence 999999999999999999999999999999999999998665543368999999999999865 8999999999999999
Q ss_pred ChhHHhh
Q 000351 822 TFEDLSN 828 (1623)
Q Consensus 822 ~~~~l~~ 828 (1623)
+++++..
T Consensus 226 ~~~~~~~ 232 (236)
T cd03219 226 TPDEVRN 232 (236)
T ss_pred CHHHhcc
Confidence 9888754
No 386
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=346.31 Aligned_cols=199 Identities=29% Similarity=0.449 Sum_probs=169.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|+++.|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++| .+.+ ++.
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~~~~ 80 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRG-RVKVMGREVNAENEKWVRSK 80 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCce-EEEECCEECCCCCHHHHHhh
Confidence 5899999999963 35699999999999999999999999999999999999999998 4332 235
Q ss_pred EEEEccCc--ccCcccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 681 VAYVPQVS--WIFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 681 iay~~Q~~--~l~~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
|+|++|+| .++..||+||+.|+.. .+ .+++.++++.+++.+..+..| ..||||||||++|
T Consensus 81 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~l 149 (274)
T PRK13647 81 VGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAI 149 (274)
T ss_pred EEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHH
Confidence 99999998 5678899999998632 22 234566777778866555544 4799999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHH
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 826 (1623)
||||+.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++++. .||+|++|++|++++.|+++++
T Consensus 150 araL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 150 AGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999998866554445899999999999985 6999999999999999998754
No 387
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-35 Score=338.79 Aligned_cols=197 Identities=27% Similarity=0.413 Sum_probs=163.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCc-----cCCCCCeEEE------------
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL-----PPVSDASAVI------------ 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~-----~~~~g~~~~~------------ 677 (1623)
|+++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|.+ +|++|. +.+
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~-i~~~g~~~~~~~~~~ 76 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGE-VLLDGKDIYDLDVDV 76 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeE-EEECCEEhhhcchHH
Confidence 478999999963 57999999999999999999999999999999999999 898883 322
Q ss_pred ---cCcEEEEccCcccCcccHHHHHhcCCC---C-C----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 678 ---RGTVAYVPQVSWIFNATVRDNILFGSA---F-E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 678 ---~~~iay~~Q~~~l~~~Tv~enI~~g~~---~-~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
+..++|++|++.+++.||+||+.++.. . . +++..++++..++.+.+...++ +.+||||||
T Consensus 77 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~ 147 (227)
T cd03260 77 LELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQ 147 (227)
T ss_pred HHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHH
Confidence 235999999999888899999987532 1 1 2344556666666554433221 468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhH
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 825 (1623)
||++||||++.+|+++||||||++||+.+.+.+++.+.....+ +|+|++||+++++. .||+|++|++|++++.|++++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 9999999999999999999999999999999998866554334 89999999999876 589999999999999988765
No 388
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=348.49 Aligned_cols=205 Identities=30% Similarity=0.493 Sum_probs=169.6
Q ss_pred EEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------
Q 000351 615 ISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------- 678 (1623)
++++|++++|++.. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++| .+.+.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSG-TVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCc-EEEECCEECccccccchHH
Confidence 78999999996422 24699999999999999999999999999999999999999998 33221
Q ss_pred ---CcEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 679 ---GTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 679 ---~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
..|+||+|+| .+++.||+|||.|+.. .+. ++..++++.++|.+++. .....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 2599999998 5788899999988631 222 34556667777753321 223468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
|||+|||||+.+|+++||||||++||+.+.+.+.+.+..... .|.|||++||+++.+. .||+|++|++|+++++|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999886654433 3899999999999875 58999999999999999999
Q ss_pred HHhhcC
Q 000351 825 DLSNNG 830 (1623)
Q Consensus 825 ~l~~~~ 830 (1623)
++.+..
T Consensus 232 ~~~~~~ 237 (290)
T PRK13634 232 EIFADP 237 (290)
T ss_pred HHhcCH
Confidence 886543
No 389
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.3e-35 Score=333.91 Aligned_cols=199 Identities=48% Similarity=0.793 Sum_probs=175.4
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE----------------EcC
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------IRG 679 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~----------------~~~ 679 (1623)
.+.|++|.|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|.... .+.
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 57899999974 357999999999999999999999999999999999999999883221 123
Q ss_pred cEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 680 TVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 680 ~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
.++|++|+|.+++.|++||+.++.+.+.++..++++.+++.+.++.+|.|+++.++....+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 59999999999999999999987666666677888999999889989999999999999999999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHH-HHhhh-cCCcEEEEEcCCcchhhhcCEEEEEeCCE
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDR-CIRGE-LSGKTRVLVTNQLHFLSQVDRIILVHEGM 816 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~-~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~ 816 (1623)
+++||||||++||+.+.+.+.+. ++... ..|+|+|++||+.+.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988873 44433 34799999999999998899999999884
No 390
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-35 Score=335.57 Aligned_cols=192 Identities=29% Similarity=0.436 Sum_probs=159.6
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVAY 683 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~iay 683 (1623)
++++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++| .+.+. ..++|
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G-~i~~~g~~~~~~~~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSG-EILIDGRDVTGVPPERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCe-EEEECCEEcCcCchhhccEEE
Confidence 468999999963 5799999999999999999999999999999999999999998 43332 35999
Q ss_pred EccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 684 VPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 684 ~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
++|++.++ +.|++||+.++.. .+. ++..+.++.+++.+..+.. ..+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRY-----------PHELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHHHHHHH
Confidence 99999887 5799999987532 122 2345566666665544433 358999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
+.+|+++||||||++||+.+.+++++.+..... .|+|+|++||+++++. .||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999986654433 4899999999999875 58999999999998765
No 391
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-36 Score=378.47 Aligned_cols=212 Identities=23% Similarity=0.343 Sum_probs=179.3
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i 1316 (1623)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGPV--HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 38999999999643 69999999999999999999999999999999999999999999999999988776554 4579
Q ss_pred EEEcCCCccccc-cHHhhcCCCC-------CC---CH----HHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHH
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFS-------EH---SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 1381 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~-------~~---sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQr 1381 (1623)
+||||++.+|.. |+++|+.... .. +. +++.++++.. |++........+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRV-----------GLKVDLDEKVANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHc-----------CCCCCcccchhhCCHHHH
Confidence 999999998875 9999996321 10 11 1223333333 343333444467999999
Q ss_pred HHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhH
Q 000351 1382 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 1459 (1623)
Q Consensus 1382 QrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~e 1459 (1623)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999999864 47899999999999987 99999999999999999988
Q ss_pred Hhh
Q 000351 1460 LLS 1462 (1623)
Q Consensus 1460 Ll~ 1462 (1623)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 753
No 392
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=4.9e-36 Score=341.73 Aligned_cols=190 Identities=25% Similarity=0.399 Sum_probs=161.0
Q ss_pred ccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEEEcCCCcccc-ccHHhhc
Q 000351 1256 LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFS-GTVRFNL 1334 (1623)
Q Consensus 1256 L~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~Lf~-gTIr~NL 1334 (1623)
|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. +.+|+||++.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCCHHH----HHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCC
Q 000351 1335 DPF-----SEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAA 1405 (1623)
Q Consensus 1335 d~~-----~~~sd~~----i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~ 1405 (1623)
... ...++++ +.+.++..++ +.........||||||||++|||||+++|+||||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGL-----------TEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCC-----------HHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 642 1222222 3444444444 3334444567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1406 VDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1406 LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998864 37899999999999876 9999999999999999887663
No 393
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=354.84 Aligned_cols=202 Identities=31% Similarity=0.447 Sum_probs=169.9
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEE
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVA 682 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ia 682 (1623)
.++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+. ..|+
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G-~I~i~g~~i~~~~~~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSG-HIRFHGTDVSRLHARDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-EEEECCEECCCCCHHHCCEE
Confidence 3789999999963 5799999999999999999999999999999999999999998 44332 3599
Q ss_pred EEccCcccC-cccHHHHHhcCCC-------CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGSA-------FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~~-------~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
||+|++.+| ..||+|||.|+.. .+. ++..+.++..++.+..+.. ..+|||||||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----------PAQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 999999998 4799999998732 121 2444556666665444433 3589999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
|||||+.+|+++|||||||+||+.+.+.+.+.+.....+ |+|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999998866554333 899999999999865 589999999999999999999876
Q ss_pred cC
Q 000351 829 NG 830 (1623)
Q Consensus 829 ~~ 830 (1623)
+.
T Consensus 227 ~p 228 (353)
T PRK10851 227 EP 228 (353)
T ss_pred Cc
Confidence 53
No 394
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.4e-35 Score=356.36 Aligned_cols=203 Identities=27% Similarity=0.410 Sum_probs=172.9
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCC--CCeEEEc-----------C
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS--DASAVIR-----------G 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~--g~~~~~~-----------~ 679 (1623)
..++++|++++|++ +.+|+|+||+|++|++++|+|||||||||||++|+|+.+|++ | .+.+. .
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G-~i~~~g~~~~~~~~~~r 79 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTG-RIAIADRDLTHAPPHKR 79 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCE-EEEECCEECCCCCHHHC
Confidence 35899999999963 569999999999999999999999999999999999999999 8 44332 3
Q ss_pred cEEEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 680 TVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 680 ~iay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
.|+||+|++.+| ..||+|||.|+.. .+ .++..++++..+|.+..+..| .+|||||||||+|
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvaL 148 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIAI 148 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHHH
Confidence 599999999998 5699999998632 22 134556677777766555544 4899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC--CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS--GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||||..+|+++|||||||+||+...+++.+.+.....+ |+|+|+|||+.+++. .||+|++|++|++++.|+++++..
T Consensus 149 ARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 149 ARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999998876654433 789999999999865 589999999999999999999976
Q ss_pred cC
Q 000351 829 NG 830 (1623)
Q Consensus 829 ~~ 830 (1623)
+.
T Consensus 229 ~p 230 (362)
T TIGR03258 229 AP 230 (362)
T ss_pred Cc
Confidence 53
No 395
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=358.30 Aligned_cols=201 Identities=30% Similarity=0.420 Sum_probs=170.7
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEE
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVA 682 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ia 682 (1623)
.++++|++++|++ +++|+|+||+|++|++++|+|||||||||||++|+|+++|++| .+.+. ..|+
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G-~I~~~g~~i~~~~~~~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSG-DLFIGEKRMNDVPPAERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCce-EEEECCEECCCCCHhHCCEE
Confidence 4899999999963 5699999999999999999999999999999999999999998 44332 3599
Q ss_pred EEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
|++|++.+| +.||+|||.|+.. .+. ++..++++.+++.+..+..+ .+|||||||||+||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 999999988 5699999998632 222 34566677777765444433 5899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|+.+|+++|||||||+||+.+.+.+.+.+.....+ |+|+|+|||+++++. .||+|++|++|++++.|+++++...
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998866554333 899999999999875 5899999999999999999998754
No 396
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.4e-35 Score=332.28 Aligned_cols=189 Identities=30% Similarity=0.482 Sum_probs=159.5
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc----------CcEEEEc
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR----------GTVAYVP 685 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~----------~~iay~~ 685 (1623)
+++|+++.|++ .+++|+|+||++++|++++|+||||||||||+++|+|.++|++| .+.+. ..|+|++
T Consensus 1 ~~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~i~~~~ 77 (205)
T cd03226 1 RIENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSG-SILLNGKPIKAKERRKSIGYVM 77 (205)
T ss_pred CcccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCce-EEEECCEEhhhHHhhcceEEEe
Confidence 36789999963 15799999999999999999999999999999999999999999 44332 3599999
Q ss_pred cCc--ccCcccHHHHHhcCCC---CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 686 QVS--WIFNATVRDNILFGSA---FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 686 Q~~--~l~~~Tv~enI~~g~~---~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
|+| .+++.|++||+.++.. .+.++..++++.+++.+..+..+ .+||||||||++||||++.+|+
T Consensus 78 q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p~ 146 (205)
T cd03226 78 QDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGKD 146 (205)
T ss_pred cChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCCC
Confidence 998 4568899999987632 12346677788888865554443 4799999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEE
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVK 818 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~ 818 (1623)
++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||+|++|++|+++
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 147 LLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999998866544446899999999999986 58999999999874
No 397
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-35 Score=332.23 Aligned_cols=194 Identities=25% Similarity=0.337 Sum_probs=166.4
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 36999999999999999999999999999999999999999999999999997654 456788999
Q ss_pred EcCCCcccc-ccHHhhcCCCC----CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcC
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 1393 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~----~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~ 1393 (1623)
+||++.+++ .|+++|+.... ...++++.++++..++.++.. .....||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFED-----------VPVRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhh-----------CChhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999996432 123456677777777655432 23457999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEE
Q 000351 1394 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 1446 (1623)
Q Consensus 1394 p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl 1446 (1623)
|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999864 47899999999999976 4677665
No 398
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=375.40 Aligned_cols=215 Identities=23% Similarity=0.360 Sum_probs=177.7
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHh-hhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~l-R~~i 1316 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 3899999999964 369999999999999999999999999999999999999999999999999976655443 5679
Q ss_pred EEEcCCCccccc-cHHhhcCCCCC-------CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHH
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 1388 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~~-------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLAR 1388 (1623)
+|+||++.+|.. |+++|+.+... .+..+..+ .+.+.++.+ |+.........+||||||||++|||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 154 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIAK 154 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHH
Confidence 999999988865 99999974211 11211111 122233332 3333333444579999999999999
Q ss_pred hhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1389 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1389 ALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
||+.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 9999999999999999999999999999998864 46899999999999976 9999999999999999988764
No 399
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2e-35 Score=349.50 Aligned_cols=202 Identities=26% Similarity=0.410 Sum_probs=168.1
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------cCc
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGT 680 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------~~~ 680 (1623)
..++++|+++.|++ +.+|+||||+|++|++++|+||||||||||+++|+|+++|++| .+.+ +.+
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G-~v~i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAG-SISLCGEPVPSRARHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCce-EEEECCEecccchHHHHhc
Confidence 46999999999963 5799999999999999999999999999999999999999999 4433 236
Q ss_pred EEEEccCcccC-cccHHHHHhcC-CC--CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 VAYVPQVSWIF-NATVRDNILFG-SA--FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 iay~~Q~~~l~-~~Tv~enI~~g-~~--~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
||||||++.++ +.|++||+.+. .. .+. ++..++++.+++.+..+. ...+||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADA-----------KVGELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcC-----------chhhCCHHHHHHHHHH
Confidence 99999999987 57999999852 21 122 233445555555433222 2357999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|||+++|++++|||||+|||+.+.+++++.+.....+|+|+|++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999998655444458999999999999865 899999999999999999998644
No 400
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=346.86 Aligned_cols=205 Identities=24% Similarity=0.439 Sum_probs=167.3
Q ss_pred cEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------
Q 000351 614 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------- 677 (1623)
.++++|++++|++.. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|. +.+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~-i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGT-VTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE-EEECCEECccccccchH
Confidence 378999999996322 247999999999999999999999999999999999999999983 322
Q ss_pred ---cCcEEEEccCc--ccCcccHHHHHhcCCC---CCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 ---RGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 ---~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..||||+|+| .+++.||+|||.|+.. .+.+ +..+.++.+++..+. ....+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDV----------MSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHH
Confidence 23589999997 5788899999998631 2322 233444555553211 223456899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
|||++|||||+.+|+++||||||++||+.+.+++.+.+..... .|+|+|+|||+++++. .||+|++|++|+++++|++
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999886554333 4899999999999875 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.+.
T Consensus 231 ~~~~~~ 236 (286)
T PRK13646 231 KELFKD 236 (286)
T ss_pred HHHHhC
Confidence 988654
No 401
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-35 Score=335.87 Aligned_cols=190 Identities=25% Similarity=0.430 Sum_probs=158.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc----------------
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR---------------- 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~---------------- 678 (1623)
++++|++++|++. .+++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 79 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGK-IRFNGQDLTRLRGREIPFLR 79 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceE-EEECCEehhhcChhHHHHHH
Confidence 7899999999632 246999999999999999999999999999999999999999983 3322
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
..++|++|++.++ +.|++||+.++.. .+ +++..++++.+++.+..+..+ .+||||||||++
T Consensus 80 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 148 (216)
T TIGR00960 80 RHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVA 148 (216)
T ss_pred HhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHH
Confidence 3589999999887 4799999987521 11 234566677777765444433 479999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEE
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMV 817 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i 817 (1623)
||||++.+|+++||||||++||+.+.+++.+.+.....+|+|+|+|||+++++. .||+|++|++|+|
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999866544345899999999999987 4899999999974
No 402
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=335.73 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=164.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc------------CcEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------GTVA 682 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------~~ia 682 (1623)
|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|.++|++| .+.+. ..++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G-~i~~~g~~~~~~~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSG-RATVAGHDVVREPREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCEecCcChHHHhhcEE
Confidence 478999999963 5799999999999999999999999999999999999999998 44332 3599
Q ss_pred EEccCcccCc-ccHHHHHhcCC---CCC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l~~-~Tv~enI~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
|++|++.++. .|++||+.++. ..+ +++..+.++..++.+..+.. ..+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 9999998874 69999997642 122 23455667777776544433 35799999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHH
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 826 (1623)
++.+|+++||||||++||+++.+.+.+.+.....+ |+|+|++||+++++.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998866554444 8999999999999864 899999999999999887664
No 403
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=343.47 Aligned_cols=205 Identities=30% Similarity=0.450 Sum_probs=173.5
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------C
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------G 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~ 679 (1623)
+.++++|+++.|+. ..+++|+|+||+|++||+++|+||||||||||+++|+|.++|++| .+.+. .
T Consensus 4 ~~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G-~i~~~g~~i~~~~~~~~~~ 81 (279)
T PRK13635 4 EIIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAG-TITVGGMVLSEETVWDVRR 81 (279)
T ss_pred ceEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCc-EEEECCEECCcCcHHHHhh
Confidence 46999999999963 235799999999999999999999999999999999999999998 43322 3
Q ss_pred cEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.|+|++|+| .+++.||+|||.++.. .++ ++..++++.++|.+.++..+ .+||||||||++
T Consensus 82 ~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~ 150 (279)
T PRK13635 82 QVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVA 150 (279)
T ss_pred heEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHH
Confidence 599999998 4568899999987521 222 34566777778876666554 489999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||||++.+|+++||||||++||+.+.+.+++.+.....+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 151 laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 151 IAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999866544333 8999999999999888999999999999999999888654
Q ss_pred C
Q 000351 830 G 830 (1623)
Q Consensus 830 ~ 830 (1623)
.
T Consensus 231 ~ 231 (279)
T PRK13635 231 G 231 (279)
T ss_pred H
Confidence 3
No 404
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=354.39 Aligned_cols=203 Identities=28% Similarity=0.429 Sum_probs=168.5
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------- 677 (1623)
|+++|++++|+... ++++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~-I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGR-VLVDGQDLTALSEKELRKA 80 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceE-EEECCEECCcCCHHHHHHH
Confidence 78999999997321 357999999999999999999999999999999999999999983 332
Q ss_pred cCcEEEEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 678 RGTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 678 ~~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
+..|+|++|++.++ +.|++||+.++.. .+. ++..+.++..++.+..+. ...+|||||||||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGq~qRv 149 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADR-----------YPAQLSGGQKQRV 149 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 23699999999987 4799999987521 222 234445555565443332 3458999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHh
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
+|||||+.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 150 ~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 150 AIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999986655433 38999999999999765 8999999999999999999987
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
..
T Consensus 230 ~~ 231 (343)
T PRK11153 230 SH 231 (343)
T ss_pred hC
Confidence 54
No 405
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.7e-35 Score=374.41 Aligned_cols=210 Identities=19% Similarity=0.227 Sum_probs=181.0
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+.. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+++++
T Consensus 4 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 4 LQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred EEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 8999999999643 59999999999999999999999999999999999999999999999998877777778888999
Q ss_pred EcCCCcc--c-------cccHHhhcCCCCCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1319 IPQSPVL--F-------SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1319 vpQdp~L--f-------~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
+||++.+ + ..|+++|+... ...++++.++++..++.+.. ......||||||||++||||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~a 149 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDE-VKDPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTLLCQA 149 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccc-hhHHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHHHHHH
Confidence 9999753 2 34888888642 11234466666666554433 33345799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhh
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 1462 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~ 1462 (1623)
|+.+|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 150 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 150 LMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999864 36899999999999987 99999999999999999998875
No 406
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.1e-34 Score=378.36 Aligned_cols=97 Identities=25% Similarity=0.439 Sum_probs=89.0
Q ss_pred Ccch-hhhcCCCCCChhHHHHHHHHHhhhc---CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhh
Q 000351 1364 GLDA-QVSEAGENFSVGQRQLLSLSRALLR---RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTII 1438 (1623)
Q Consensus 1364 gLdt-~v~e~G~~LSgGQrQrLaLARALL~---~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~ 1438 (1623)
||+. .+++...+|||||+||++|||+|++ +|+++||||||++||+.+.+.+++.|++.. ++.|||+|+|+++.+.
T Consensus 816 gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~ 895 (924)
T TIGR00630 816 GLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIK 895 (924)
T ss_pred CCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 6654 4677788999999999999999997 589999999999999999999999999875 4789999999999998
Q ss_pred ccCEEEEE------eCceEeeecChhHH
Q 000351 1439 DCDRILLL------DSGRVLEYDTPEEL 1460 (1623)
Q Consensus 1439 ~~DrI~Vl------~~G~ive~Gtp~eL 1460 (1623)
.||+|++| ++|+|++.|+|+++
T Consensus 896 ~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 896 TADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 89999999 79999999999886
No 407
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=334.77 Aligned_cols=197 Identities=29% Similarity=0.444 Sum_probs=162.9
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------cCcEEEEc
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------RGTVAYVP 685 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------~~~iay~~ 685 (1623)
++++|+++.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|..+|++| .+.+ +..++|++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSG-EVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCEECccccCcEEEEe
Confidence 46899999996311 15799999999999999999999999999999999999999998 4443 24699999
Q ss_pred cCcccCc-ccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000351 686 QVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 757 (1623)
Q Consensus 686 Q~~~l~~-~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~ 757 (1623)
|++.++. .|++||+.++.. .+ .++..+.++..++.+.++..+ .+||||||||++||||+++
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 9998875 799999986521 11 234556667777765444433 5799999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEe--CCEEEEecCh
Q 000351 758 NSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVH--EGMVKEEGTF 823 (1623)
Q Consensus 758 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~--~G~i~~~g~~ 823 (1623)
+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++++. .||++++|+ +|+++++++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999986654433 4899999999999875 589999999 7999988764
No 408
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=4.6e-35 Score=333.36 Aligned_cols=204 Identities=26% Similarity=0.445 Sum_probs=173.0
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------- 678 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------- 678 (1623)
.+.++++|++++|+...++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++| .+.+.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGG-QVLLDGKPISQYEHKYLH 87 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCc-EEEECCCchHHcCHHHHH
Confidence 4579999999999743235799999999999999999999999999999999999999999 44332
Q ss_pred CcEEEEccCcccCcccHHHHHhcCCC-CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000351 679 GTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 757 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~~Tv~enI~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~ 757 (1623)
..++|++|++.+++.||+||+.++.. .....+.+..+...+.+.++.++.|..+.++....+|||||||||+||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 35999999999998999999987643 22233333444456677788888777777888899999999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEE
Q 000351 758 NSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMV 817 (1623)
Q Consensus 758 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i 817 (1623)
+|+++||||||++||+++.+.+.+.+.. ..+++|+|++||+++++..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999876554 4457899999999999988999999999874
No 409
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=335.13 Aligned_cols=202 Identities=26% Similarity=0.401 Sum_probs=169.4
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++| .+.+ +..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~i~~~~~~~~~~~ 78 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEG-SILIDGVDIKTIDVIDLRRK 78 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-EEEECCEEhhhcChHHhhhc
Confidence 4889999999963 5799999999999999999999999999999999999999998 3332 235
Q ss_pred EEEEccCcccCcccHHHHHhcCCCC---CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000351 681 VAYVPQVSWIFNATVRDNILFGSAF---EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 757 (1623)
Q Consensus 681 iay~~Q~~~l~~~Tv~enI~~g~~~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~ 757 (1623)
++|++|++.++..|++||+.++... ..++..+.++.+++..++ ......+||||||||++||||++.
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 79 IGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999999989999999876322 233455566666664222 123456899999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000351 758 NSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 758 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++++. .||+|++|++|++++.|+.+++...
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999876654333 3899999999999976 5899999999999999999988754
No 410
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.5e-35 Score=327.47 Aligned_cols=189 Identities=25% Similarity=0.419 Sum_probs=161.0
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cC
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 679 (1623)
..++++|++++|+.. .+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|. +.+ +.
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGK-IEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCe-EEECCEEhHHCCHHHHHh
Confidence 469999999999742 247999999999999999999999999999999999999999994 333 24
Q ss_pred cEEEEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 680 TVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 680 ~iay~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
.|+||+|+|.++++|++||+.+...+++++..+.++ ++.+..+||||||||++||||++.+|
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 699999999999999999998654444333322222 24566789999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 822 (1623)
+++||||||++||+.+.+.+.+.+.. ..+|+|+|++||+.+.+..||++++|++|++++.|+
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999999999876554 346899999999999988899999999999998775
No 411
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=335.90 Aligned_cols=198 Identities=24% Similarity=0.401 Sum_probs=163.1
Q ss_pred CcEEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------
Q 000351 613 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------- 678 (1623)
+.++++|+++.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+.
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGD-VIFNGQPMSKLSSAAKA 82 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceE-EEECCEEcCcCCHHHHH
Confidence 3589999999997422 257999999999999999999999999999999999999999983 3221
Q ss_pred ----CcEEEEccCcccCc-ccHHHHHhcCC---CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 679 ----GTVAYVPQVSWIFN-ATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 679 ----~~iay~~Q~~~l~~-~Tv~enI~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
..|+|++|++.++. .|++||+.++. ..+. ++..++++.+++.+..+ ....+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRAN-----------HRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHH
Confidence 35999999998875 59999998632 1222 23455666666643332 33468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecC
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 822 (1623)
||++||||++.+|+++||||||++||+.+.+.+.+.+..... +|+|+|++||+++++..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999876654333 4899999999999998889999999999998775
No 412
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.5e-35 Score=329.92 Aligned_cols=192 Identities=23% Similarity=0.382 Sum_probs=162.7
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVAY 683 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~iay 683 (1623)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|..+|++| .+.+. ..++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSG-EITFDGKSYQKNIEALRRIGA 76 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCce-EEEECCCcccchHHHHhhEEE
Confidence 47899999995 35799999999999999999999999999999999999999998 44332 35999
Q ss_pred EccCcccC-cccHHHHHhcCC---CCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000351 684 VPQVSWIF-NATVRDNILFGS---AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1623)
Q Consensus 684 ~~Q~~~l~-~~Tv~enI~~g~---~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~ 759 (1623)
++|++.++ +.|++||+.++. ..++++..+.++..++.+..+. ...+|||||||||+||||++.+|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 689999997652 2245566677777777654433 34589999999999999999999
Q ss_pred CEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 760 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 760 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
+++||||||++||+.+.+.+++.+.....+|+|+|++||+++++. .||++++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999998866544346899999999999986 58999999999998764
No 413
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=337.95 Aligned_cols=199 Identities=28% Similarity=0.458 Sum_probs=163.5
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------c
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------------R 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----------------~ 678 (1623)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+ +
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 77 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGS-VLIDGTDINKLKGKALRQLR 77 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCce-EEECCEeccccCHhHHHHHH
Confidence 468999999963 257999999999999999999999999999999999999999984 322 1
Q ss_pred CcEEEEccCcccCc-ccHHHHHhcCCC------------CC---HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccC
Q 000351 679 GTVAYVPQVSWIFN-ATVRDNILFGSA------------FE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~-~Tv~enI~~g~~------------~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
..++|++|++.++. .||+||+.++.. .. .++..+.++..++.+. ....+.+||
T Consensus 78 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS 146 (241)
T cd03256 78 RQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDK-----------AYQRADQLS 146 (241)
T ss_pred hccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhh-----------hCCCcccCC
Confidence 35999999998874 799999986421 11 1223344455554332 234557899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEe
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEE 820 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~ 820 (1623)
|||||||+||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++.+. .||++++|++|++++.
T Consensus 147 ~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~ 226 (241)
T cd03256 147 GGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFD 226 (241)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEee
Confidence 9999999999999999999999999999999999999886655433 4899999999999987 6899999999999999
Q ss_pred cChhHHh
Q 000351 821 GTFEDLS 827 (1623)
Q Consensus 821 g~~~~l~ 827 (1623)
|+++++.
T Consensus 227 ~~~~~~~ 233 (241)
T cd03256 227 GPPAELT 233 (241)
T ss_pred cCHHHhh
Confidence 9988863
No 414
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.1e-35 Score=337.58 Aligned_cols=198 Identities=29% Similarity=0.461 Sum_probs=163.9
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------c
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------------R 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----------------~ 678 (1623)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+ +
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGS-ILLEGTDITKLRGKKLRKLR 78 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccE-EEECCEEhhhCCHHHHHHHH
Confidence 689999999962 357999999999999999999999999999999999999999984 332 2
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC------------CC---HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccC
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA------------FE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~------------~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
..++|++|++.++ +.||+||+.++.. .. .++..+.++.+++.+.+ .....+||
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS 147 (243)
T TIGR02315 79 RRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-----------YQRADQLS 147 (243)
T ss_pred hheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-----------cCCcccCC
Confidence 3499999999887 4799999987531 01 12344455555554433 23456899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEe
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEE 820 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~ 820 (1623)
||||||++||||++.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++++. .||++++|++|++++.
T Consensus 148 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 227 (243)
T TIGR02315 148 GGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFD 227 (243)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 9999999999999999999999999999999999999876654433 3899999999999985 5899999999999999
Q ss_pred cChhHH
Q 000351 821 GTFEDL 826 (1623)
Q Consensus 821 g~~~~l 826 (1623)
|+++++
T Consensus 228 ~~~~~~ 233 (243)
T TIGR02315 228 GAPSEL 233 (243)
T ss_pred CCHHHh
Confidence 998876
No 415
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=337.30 Aligned_cols=197 Identities=27% Similarity=0.369 Sum_probs=166.0
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------CcEEEE
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------GTVAYV 684 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------~~iay~ 684 (1623)
..|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++| .+.+. ..++|+
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G-~i~~~g~~~~~~~~~i~~v 86 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAG-ELLAGTAPLAEAREDTRLM 86 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCe-EEEECCEEHHHhhCceEEE
Confidence 46999999999963 5799999999999999999999999999999999999999998 44332 359999
Q ss_pred ccCcccCc-ccHHHHHhcCCCC-CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEE
Q 000351 685 PQVSWIFN-ATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 762 (1623)
Q Consensus 685 ~Q~~~l~~-~Tv~enI~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~il 762 (1623)
+|++.++. .||+||+.++... .+++..+.++..++.+..+ ....+||||||||++||||++.+|+++
T Consensus 87 ~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGqkqrl~laraL~~~p~ll 155 (257)
T PRK11247 87 FQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRAN-----------EWPAALSGGQKQRVALARALIHRPGLL 155 (257)
T ss_pred ecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99998875 7999999876321 2345566677777654433 334689999999999999999999999
Q ss_pred EEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 763 IFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 763 lLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
||||||++||+.+.+.+.+.+..... .++|+|++||+++++. .||+|++|++|+++++|+.+
T Consensus 156 lLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 156 LLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999886654333 4899999999999875 58999999999999988754
No 416
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.1e-35 Score=334.33 Aligned_cols=191 Identities=28% Similarity=0.434 Sum_probs=157.0
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------- 677 (1623)
++++|++++|++.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|. +.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGE-VRVDGTDISKLSEKELAAF 79 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCcee-EEECCEehhhcchhHHHHH
Confidence 46899999996421 157999999999999999999999999999999999999999984 322
Q ss_pred -cCcEEEEccCcccCc-ccHHHHHhcCCCC---C----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 678 -RGTVAYVPQVSWIFN-ATVRDNILFGSAF---E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 678 -~~~iay~~Q~~~l~~-~Tv~enI~~g~~~---~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+..++|++|++.++. .|++||+.++... + ++++.+.++..++.+.++ ....+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLN-----------HYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------cChhhcCHHHHHH
Confidence 135999999999885 5999999875321 1 234455666666654333 3345899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEE
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMV 817 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i 817 (1623)
++||||++.+|+++||||||++||+.+.+.+.+.+..... +|+|+|++||+++++..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999999999886654433 48999999999999888999999999974
No 417
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=341.62 Aligned_cols=201 Identities=31% Similarity=0.453 Sum_probs=168.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------cCc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------RGT 680 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~~~ 680 (1623)
++++|++++|++ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|. +.+ +..
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~-i~~~g~~~~~~~~~~~~~~~ 78 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGK-VLVSGIDTGDFSKLQGIRKL 78 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce-EEECCEECCccccHHHHHhh
Confidence 789999999963 356999999999999999999999999999999999999999983 322 235
Q ss_pred EEEEccCcc--cCcccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 681 VAYVPQVSW--IFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 681 iay~~Q~~~--l~~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
|+|++|+|. +++.|++|||.++.. .+ .++..++++..++.+..+. ....||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~l 147 (274)
T PRK13644 79 VGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHR-----------SPKTLSGGQGQCVAL 147 (274)
T ss_pred eEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------CcccCCHHHHHHHHH
Confidence 999999986 467899999987632 22 2334555666666544433 345899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|||++.+|+++||||||++||+.+.+.+++.+.....+|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999988665443458999999999999988999999999999999999887643
No 418
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=382.41 Aligned_cols=223 Identities=24% Similarity=0.366 Sum_probs=180.2
Q ss_pred cEEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecC----------
Q 000351 1238 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA---------- 1305 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~---------- 1305 (1623)
.|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 59999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---Hhh-hceEEEcCCC--cccc-ccHHhhcCCC----CCCCH----HHHHHHHHHhcHHHHHHhccCCcchhhh
Q 000351 1306 KFGLM---DLR-KILGIIPQSP--VLFS-GTVRFNLDPF----SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVS 1370 (1623)
Q Consensus 1306 ~i~~~---~lR-~~i~~vpQdp--~Lf~-gTIr~NLd~~----~~~sd----~~i~~aL~~~~l~~~i~~lp~gLdt~v~ 1370 (1623)
+.+.. .+| ++|++|+|+| .++. .||++|+... ...+. +++.++|+.+++.+. +....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~~~ 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTILS 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhHHh
Confidence 22322 233 4799999999 5776 4999999631 11222 234445555444210 12344
Q ss_pred cCCCCCChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-C-CcEEEEeecCchhhhc-cCEEEEEe
Q 000351 1371 EAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-K-SCTMLIIAHRLNTIID-CDRILLLD 1447 (1623)
Q Consensus 1371 e~G~~LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~ 1447 (1623)
....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 4556899999999999999999999999999999999999999999999875 3 7899999999999977 99999999
Q ss_pred CceEeeecChhHHhhcCCChH
Q 000351 1448 SGRVLEYDTPEELLSNEGSSF 1468 (1623)
Q Consensus 1448 ~G~ive~Gtp~eLl~~~~~~f 1468 (1623)
+|+|++.|++++++..+...|
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCeecccCCHHHhhcCCCChh
Confidence 999999999999976543333
No 419
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.4e-35 Score=331.19 Aligned_cols=195 Identities=23% Similarity=0.332 Sum_probs=165.1
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceE
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 1317 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1317 (1623)
.|+++|++++|++. ++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNEE--PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCCc--eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 49999999999643 699999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EEcCCCccccc-cHHhhcCCC----CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1318 IIPQSPVLFSG-TVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1318 ~vpQdp~Lf~g-TIr~NLd~~----~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
|+||++.++.+ |+++|+... +...++.+.++++..++.+ ........||||||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAG-----------YEDTLVRQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChh-----------hccCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999887 999998532 1112333445555554432 2233345799999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeC
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDS 1448 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1448 (1623)
+|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998754 47899999999999977 999999974
No 420
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-35 Score=328.98 Aligned_cols=193 Identities=23% Similarity=0.300 Sum_probs=162.3
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999875 34567889999
Q ss_pred EcCCCcccc-ccHHhhcCCCC--CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCCc
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 1395 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~--~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p~ 1395 (1623)
+||++.++. .|+++|+.... ...+..+.++++..++.+ .......+||||||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEH-----------LIDYPCGLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCch-----------hhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999999874 69999996421 112233444454444332 2223334799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEE
Q 000351 1396 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 1445 (1623)
Q Consensus 1396 ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~V 1445 (1623)
+|||||||++||+.+.+.+.+.|++.. +++|+|+|||+.+.+.+||.-++
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999863 57899999999999999997654
No 421
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-35 Score=334.89 Aligned_cols=202 Identities=28% Similarity=0.444 Sum_probs=166.0
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------- 677 (1623)
|+++|++++|+... .+++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGS-VLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCEEcccCCHHHHHHH
Confidence 78999999996421 127999999999999999999999999999999999999999984 322
Q ss_pred cCcEEEEccCcccCc-ccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHH
Q 000351 678 RGTVAYVPQVSWIFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 749 (1623)
Q Consensus 678 ~~~iay~~Q~~~l~~-~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRv 749 (1623)
+..|+|++|++.++. .|++||+.++.. .+. ++..+.++..++.+.++. ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRV 149 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHH
Confidence 235999999999985 799999986521 221 234455555665543333 3458999999999
Q ss_pred HHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 750 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 750 aLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
+||||++.+|+++||||||++||+.+.+.+++.+.....+ |+|+|++||+++.+. .||++++|++|++++.|+.+++.
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 150 GIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999998866554333 899999999999976 48999999999999999988775
Q ss_pred h
Q 000351 828 N 828 (1623)
Q Consensus 828 ~ 828 (1623)
+
T Consensus 230 ~ 230 (233)
T cd03258 230 A 230 (233)
T ss_pred c
Confidence 3
No 422
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=338.91 Aligned_cols=205 Identities=23% Similarity=0.369 Sum_probs=168.4
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc-----CCCCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~-----~~~g~~~~~---------- 677 (1623)
+.++++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++| .+.+
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G-~i~~~g~~i~~~~~ 80 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEG-EILLDGENIYDPHV 80 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCce-EEEECCEEcccccc
Confidence 56999999999963 579999999999999999999999999999999999864 4677 3322
Q ss_pred -----cCcEEEEccCcccCcccHHHHHhcCCC---C-C----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 -----RGTVAYVPQVSWIFNATVRDNILFGSA---F-E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~~~Tv~enI~~g~~---~-~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
+..|+|++|++.+++.|++||+.++.. . + .++..+.++.+++.+.+. +..+....+||||
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 153 (253)
T PRK14242 81 DVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGG 153 (253)
T ss_pred CHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHH
Confidence 235999999999988899999987521 1 1 234445566666643332 1234566789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
|||||+||||++.+|+++||||||++||+.+.+++.+.+.. ..+++|+|++||+++++. .||+|++|++|++++.|++
T Consensus 154 q~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~ 232 (253)
T PRK14242 154 QQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999886554 345799999999999985 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.+.
T Consensus 233 ~~~~~~ 238 (253)
T PRK14242 233 EQIFTR 238 (253)
T ss_pred HHHHcC
Confidence 887643
No 423
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=353.50 Aligned_cols=204 Identities=25% Similarity=0.412 Sum_probs=171.7
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------Cc
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GT 680 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~ 680 (1623)
...++++|++++|++ .++|+|+||+|++|++++|+|||||||||||++|+|+.+|++| .+.+. ..
T Consensus 17 ~~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G-~I~i~g~~i~~~~~~~r~ 92 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAG-QIMLDGVDLSHVPPYQRP 92 (377)
T ss_pred CceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCce-EEEECCEECCCCCHHHCC
Confidence 456999999999963 5699999999999999999999999999999999999999998 44332 35
Q ss_pred EEEEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 VAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 iay~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
||||+|++.+| ..||+|||.|+.. .+. ++..+.++..++.+..+..| .+|||||||||+||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHH
Confidence 99999999998 5699999998732 222 23455566666655444433 48999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
|||+.+|+++|||||||+||+...+.+.+.+..... .|.|+|+||||.+++ ..||+|++|++|++++.|+++++..+.
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999876655433 489999999999986 469999999999999999999987653
No 424
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-35 Score=327.80 Aligned_cols=198 Identities=29% Similarity=0.467 Sum_probs=173.7
Q ss_pred cEEEEEEEEEeCCCC-------CCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH
Q 000351 1238 SIKFEDVVLRYRPEL-------PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~-------~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~ 1310 (1623)
-++++|+++.|+... -.+++||||+|++||.+||||.|||||||+.++|+|+++|++|+|.++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 26899999999999999999999999999999999999999999999999987765
Q ss_pred HhhhceEEEcCCCccccccHHhhcCCCCCCCHHHHHHHHHHhcHHH-HHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1311 DLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1311 ~lR~~i~~vpQdp~Lf~gTIr~NLd~~~~~sd~~i~~aL~~~~l~~-~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
.+..++++.+.|+.+++.+ +..+.| ..||||||||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ryP-----------helSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRYP-----------HELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcCC-----------cccCchhhhhHHHHHH
Confidence 1223466888999988765 555554 4799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHhhcCCC
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 1466 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl~~~~~ 1466 (1623)
|.-+|+++++|||||+||.-..+.|.+.+.+.- .+-|.++|||+++.+.. ||||+||..|+|||.|+.+++.+++..
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999998754 37899999999999998 999999999999999999999998877
Q ss_pred hHHHHHHHh
Q 000351 1467 SFSKMVQST 1475 (1623)
Q Consensus 1467 ~f~~l~~~~ 1475 (1623)
.|.+..-++
T Consensus 204 pYTk~Ll~a 212 (268)
T COG4608 204 PYTKALLSA 212 (268)
T ss_pred HHHHHHHHh
Confidence 777655443
No 425
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.2e-35 Score=330.59 Aligned_cols=188 Identities=30% Similarity=0.519 Sum_probs=156.9
Q ss_pred EEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------CcEEEEccCc
Q 000351 617 IRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------GTVAYVPQVS 688 (1623)
Q Consensus 617 ~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------~~iay~~Q~~ 688 (1623)
++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+. ..++|++|++
T Consensus 2 ~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G-~i~~~g~~~~~~~~~i~~v~q~~ 77 (213)
T cd03235 2 VEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSG-SIRVFGKPLEKERKRIGYVPQRR 77 (213)
T ss_pred cccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCC-EEEECCccHHHHHhheEEecccc
Confidence 6789999963 5699999999999999999999999999999999999999999 55543 3599999998
Q ss_pred cc---CcccHHHHHhcCCCC-----------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 689 WI---FNATVRDNILFGSAF-----------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 689 ~l---~~~Tv~enI~~g~~~-----------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
.+ ++.|++||+.++... .+++..++++..++.+.++.. ..+||||||||++||||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~la~a 146 (213)
T cd03235 78 SIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRVLLARA 146 (213)
T ss_pred ccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHHH
Confidence 76 568999999875321 123456677777776554432 35799999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEe
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEE 820 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~ 820 (1623)
+..+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++.. ||+|++|++| +++.
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988665544468999999999999865 8999999886 4443
No 426
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.6e-35 Score=346.31 Aligned_cols=201 Identities=25% Similarity=0.401 Sum_probs=166.9
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------cCc
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGT 680 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------~~~ 680 (1623)
..|+++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++| .+.+ +..
T Consensus 3 ~~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~~~ 78 (303)
T TIGR01288 3 VAIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRG-KITVLGEPVPSRARLARVA 78 (303)
T ss_pred cEEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCEECcccHHHHhhc
Confidence 46899999999963 5799999999999999999999999999999999999999998 4332 246
Q ss_pred EEEEccCcccC-cccHHHHHhcC-C--CCCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 VAYVPQVSWIF-NATVRDNILFG-S--AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 iay~~Q~~~l~-~~Tv~enI~~g-~--~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
+||+||++.++ +.|++||+.+. . ..+.. +..+.++..++.+..+ ....+||||||||++||
T Consensus 79 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 147 (303)
T TIGR01288 79 IGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKAD-----------VRVALLSGGMKRRLTLA 147 (303)
T ss_pred EEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CchhhCCHHHHHHHHHH
Confidence 99999999887 57999999742 1 12222 2334455555543322 23457999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||++.+|+++||||||++||+.+.+++++.+.....+|+|+|++||+++++. .||+|++|++|+++..|+++++..
T Consensus 148 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 148 RALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999866554446899999999999986 589999999999999999998864
No 427
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.7e-35 Score=331.87 Aligned_cols=198 Identities=28% Similarity=0.511 Sum_probs=164.4
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------cCcEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTVA 682 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------~~~ia 682 (1623)
++++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|.++|++| .+.+ +..++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSG-TAYINGYSIRTDRKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc-EEEECCEecccchHHHhhhEE
Confidence 4789999999632 25799999999999999999999999999999999999999998 4332 23599
Q ss_pred EEccCcccC-cccHHHHHhcCC---CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWIF-NATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l~-~~Tv~enI~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
|++|++.++ +.|++||+.++. ..+. ++..+.++.+++.+..+. ...+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANK-----------RARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------hhhhCCHHHHHHHHHHHH
Confidence 999999887 689999998642 1221 345566666666543332 335899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHH
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 826 (1623)
++.+|+++||||||++||+.+.+.+.+.+.. ..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999875544 3456999999999999864 899999999999999988764
No 428
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.9e-36 Score=303.30 Aligned_cols=216 Identities=27% Similarity=0.416 Sum_probs=185.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCC----------
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF---------- 1307 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i---------- 1307 (1623)
.++++|+.++|++. .|||+||++.++|+.|.|+|-|||||||+++++.=+-.|+.|+|.++|..|...
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 48999999999765 699999999999999999999999999999999999999999999999887432
Q ss_pred ---ChHHhhhceEEEcCCCccccc-cHHhhcC--CCC--CCCH-HHHH---HHHHHhcHHHHHHhccCCcchhhhcCCCC
Q 000351 1308 ---GLMDLRKILGIIPQSPVLFSG-TVRFNLD--PFS--EHSD-ADLW---EALERAHLKDAIRRNSLGLDAQVSEAGEN 1375 (1623)
Q Consensus 1308 ---~~~~lR~~i~~vpQdp~Lf~g-TIr~NLd--~~~--~~sd-~~i~---~aL~~~~l~~~i~~lp~gLdt~v~e~G~~ 1375 (1623)
.++.+|+++++|+|...|++. ||-+|+- |.. ..+. +.+. .-|.++|+.+--+.. ...
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~Y-----------P~~ 152 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAY-----------PAH 152 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcC-----------ccc
Confidence 245579999999999999976 9999984 321 1222 2222 235556665544443 357
Q ss_pred CChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1376 LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
|||||+||.+|||||.-+|+++++|||||+|||+---.+.+.+++.. .|+|+++|||.+...++ +..|+.+.+|+|-|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE 232 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE 232 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc
Confidence 99999999999999999999999999999999999999999998876 58999999999999998 99999999999999
Q ss_pred ecChhHHhhcCCC
Q 000351 1454 YDTPEELLSNEGS 1466 (1623)
Q Consensus 1454 ~Gtp~eLl~~~~~ 1466 (1623)
.|+|+++..++.|
T Consensus 233 ~G~P~qvf~nP~S 245 (256)
T COG4598 233 EGPPEQVFGNPQS 245 (256)
T ss_pred cCChHHHhcCCCC
Confidence 9999999988765
No 429
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6e-35 Score=334.48 Aligned_cols=200 Identities=20% Similarity=0.365 Sum_probs=165.6
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc------------CcEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------GTVA 682 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------~~ia 682 (1623)
++++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+. ..++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~-i~~~g~~i~~~~~~~~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQ-ISVAGHDLRRAPRAALARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceE-EEECCEEcccCChhhhhhEE
Confidence 789999999963 57999999999999999999999999999999999999999983 3322 2599
Q ss_pred EEccCccc-CcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWI-FNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l-~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
|++|++.+ ++.|++||+.++.. ... ++..+.++..++.+. .+....+||||||||++||||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARA 146 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 99999988 57899999986422 222 223334444444322 344556899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
++.+|+++||||||++||+.+.+.+.+.+.... .+|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999998665433 248999999999999988999999999999999999887654
No 430
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-35 Score=341.87 Aligned_cols=204 Identities=25% Similarity=0.421 Sum_probs=170.3
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------- 677 (1623)
+.++++|+++.|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|. +.+
T Consensus 4 ~~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~-i~i~g~~~~~~~~~~~~~ 80 (283)
T PRK13636 4 YILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGR-ILFDGKPIDYSRKGLMKL 80 (283)
T ss_pred ceEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccE-EEECCEECCCCcchHHHH
Confidence 36999999999963 357999999999999999999999999999999999999999983 322
Q ss_pred cCcEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 678 RGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 678 ~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+..|+|++|+| .+++.|++||+.++.. +.. ++..++++.+++.+.. .....+||||||||
T Consensus 81 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qr 149 (283)
T PRK13636 81 RESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKR 149 (283)
T ss_pred HhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHH
Confidence 23599999998 5678999999987521 221 3445566777775433 23456899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHH
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 826 (1623)
++|||||+.+|+++||||||++||+.+.+.+.+.+.....+ |+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 150 l~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 229 (283)
T PRK13636 150 VAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEV 229 (283)
T ss_pred HHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999998865543333 899999999999986 6999999999999999999998
Q ss_pred hhcC
Q 000351 827 SNNG 830 (1623)
Q Consensus 827 ~~~~ 830 (1623)
....
T Consensus 230 ~~~~ 233 (283)
T PRK13636 230 FAEK 233 (283)
T ss_pred hcCH
Confidence 7543
No 431
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.1e-35 Score=330.68 Aligned_cols=192 Identities=31% Similarity=0.468 Sum_probs=158.9
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVAY 683 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~iay 683 (1623)
++++|+++.|+. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+. ..++|
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G-~v~~~g~~~~~~~~~~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSG-RIYIGGRDVTDLPPKDRDIAM 76 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCEECCcCCcccceEEE
Confidence 468999999963 5799999999999999999999999999999999999999998 43332 25999
Q ss_pred EccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 684 VPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 684 ~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
++|++.++ +.|++||+.++.. .+. ++..+.++..++.+..+. ...+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 99999987 5799999987521 222 233445556666544333 3458999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 821 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 821 (1623)
+.+|+++||||||++||+++.+++++.+..... .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999886655433 38999999999998765 8999999999998765
No 432
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6.6e-35 Score=353.27 Aligned_cols=201 Identities=29% Similarity=0.477 Sum_probs=170.8
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+ +++
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG-~I~l~G~~i~~~~~~~~~~~ 78 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAG-TVLVAGDDVEALSARAASRR 78 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCc-EEEECCEEcCcCCHHHHhcc
Confidence 589999999996 36799999999999999999999999999999999999999998 4332 235
Q ss_pred EEEEccCccc-CcccHHHHHhcCCC-----C------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 681 VAYVPQVSWI-FNATVRDNILFGSA-----F------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 681 iay~~Q~~~l-~~~Tv~enI~~g~~-----~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
|||++|++.+ ++.|++||+.++.. + +.++.+++++..++.+..+. ...+||||||||
T Consensus 79 ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQR 147 (402)
T PRK09536 79 VASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQR 147 (402)
T ss_pred eEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHH
Confidence 9999999987 58999999987641 1 12345666777777544432 345899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
++|||||+++|+++||||||++||+.+...+.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|++++++
T Consensus 148 v~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 148 VLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999999998765544345899999999999985 58999999999999999999987
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
..
T Consensus 228 ~~ 229 (402)
T PRK09536 228 TA 229 (402)
T ss_pred Cc
Confidence 64
No 433
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=6.5e-35 Score=372.14 Aligned_cols=219 Identities=25% Similarity=0.435 Sum_probs=179.3
Q ss_pred cEEEEEEEEEeCCC--CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC-----CCcEEEECCEecCCCChH
Q 000351 1238 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFGLM 1310 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p-----~~G~I~IdG~di~~i~~~ 1310 (1623)
.|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999631 23699999999999999999999999999999999999986 799999999999877654
Q ss_pred H---hh-hceEEEcCCCc--ccc-ccHHhhcCC----CCCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCC
Q 000351 1311 D---LR-KILGIIPQSPV--LFS-GTVRFNLDP----FSEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1375 (1623)
Q Consensus 1311 ~---lR-~~i~~vpQdp~--Lf~-gTIr~NLd~----~~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~ 1375 (1623)
. .| ++++||||+|. ++. .|+++|+.. ....+ ++++.++++..++.+.. ........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 3 33 57999999985 444 489988752 11122 23345555555543210 112334567
Q ss_pred CChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhc-cCEEEEEeCceEe
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 1452 (1623)
Q Consensus 1376 LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1452 (1623)
||||||||++|||||+.+|++||||||||+||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999864 37899999999999876 9999999999999
Q ss_pred eecChhHHhhcC
Q 000351 1453 EYDTPEELLSNE 1464 (1623)
Q Consensus 1453 e~Gtp~eLl~~~ 1464 (1623)
+.|+++++....
T Consensus 237 ~~g~~~~~~~~~ 248 (529)
T PRK15134 237 EQNRAATLFSAP 248 (529)
T ss_pred EeCCHHHHhhCC
Confidence 999999987643
No 434
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=7e-35 Score=333.21 Aligned_cols=199 Identities=24% Similarity=0.397 Sum_probs=163.1
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------cCc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------RGT 680 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~~~ 680 (1623)
++++|+++.|++ +++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+ +..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~-i~~~g~~~~~~~~~~~~~~~ 76 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGK-ILLDGQDITKLPMHKRARLG 76 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcE-EEECCEecccCCHhHHHhcc
Confidence 468999999963 57999999999999999999999999999999999999999984 322 135
Q ss_pred EEEEccCcccCc-ccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 VAYVPQVSWIFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 iay~~Q~~~l~~-~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
++|++|++.++. .|++||+.++.+ ... ++..+.++..++.+. ......+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 145 (232)
T cd03218 77 IGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHL-----------RKSKASSLSGGERRRVEIA 145 (232)
T ss_pred EEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHHH
Confidence 999999998876 599999986532 121 123344444444332 2344568999999999999
Q ss_pred HHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 753 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 753 Ral~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 146 ~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 146 RALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999998865544345899999999998765 589999999999999999888754
No 435
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-35 Score=341.79 Aligned_cols=199 Identities=28% Similarity=0.416 Sum_probs=165.2
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-----------------c
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-----------------R 678 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-----------------~ 678 (1623)
.++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+ +
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~-i~i~g~~~~~~~~~~~~~~~~ 101 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGK-VLIDGQDIAAMSRKELRELRR 101 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeE-EEECCEEccccChhhhhhhhc
Confidence 4556777765 356899999999999999999999999999999999999999883 322 1
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
..++|++|++.++ +.|++||+.++.. .+ +++..++++..++.+.++..+ .+||||||||++
T Consensus 102 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~ 170 (269)
T cd03294 102 KKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVG 170 (269)
T ss_pred CcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHH
Confidence 3599999999987 5799999986421 22 234556677777766555544 479999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||||++.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 171 lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 171 LARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999886654333 3899999999999875 589999999999999999998865
Q ss_pred c
Q 000351 829 N 829 (1623)
Q Consensus 829 ~ 829 (1623)
.
T Consensus 251 ~ 251 (269)
T cd03294 251 N 251 (269)
T ss_pred C
Confidence 3
No 436
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6e-35 Score=348.78 Aligned_cols=203 Identities=24% Similarity=0.406 Sum_probs=168.0
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------cC
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RG 679 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------~~ 679 (1623)
...|+++|++++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+ +.
T Consensus 39 ~~~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G-~i~i~G~~~~~~~~~~~~ 114 (340)
T PRK13536 39 TVAIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAG-KITVLGVPVPARARLARA 114 (340)
T ss_pred ceeEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCce-EEEECCEECCcchHHHhc
Confidence 356999999999963 5799999999999999999999999999999999999999998 4433 23
Q ss_pred cEEEEccCcccC-cccHHHHHhcC-C--CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 680 TVAYVPQVSWIF-NATVRDNILFG-S--AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 680 ~iay~~Q~~~l~-~~Tv~enI~~g-~--~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
.|||+||++.++ ..|++||+.+. . ..+. ++..+.++.+++.+.. .....+||||||||++|
T Consensus 115 ~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-----------~~~~~~LS~G~kqrv~l 183 (340)
T PRK13536 115 RIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-----------DARVSDLSGGMKRRLTL 183 (340)
T ss_pred cEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------CCChhhCCHHHHHHHHH
Confidence 599999999986 78999999752 1 1121 2233444555543322 22335899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||||+++|+++||||||++||+.+.+++++.+.....+|+|+|++||+++.+. .||+|++|++|+++..|+.+++.+.
T Consensus 184 A~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 184 ARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999999876554446899999999999986 5899999999999999999998643
No 437
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.4e-35 Score=330.80 Aligned_cols=199 Identities=29% Similarity=0.502 Sum_probs=161.2
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------cCc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------RGT 680 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~~~ 680 (1623)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+ +..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 76 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGS-IRFDGRDITGLPPHERARAG 76 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCEEcCCCCHHHHHhcC
Confidence 468999999963 57999999999999999999999999999999999999999984 322 235
Q ss_pred EEEEccCcccCc-ccHHHHHhcCCCCC--H---HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 681 VAYVPQVSWIFN-ATVRDNILFGSAFE--P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 681 iay~~Q~~~l~~-~Tv~enI~~g~~~~--~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
++|++|++.++. .|++||+.++.... . ++...+++... .++ ........+||||||||++||||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l~----~~~~~~~~~LS~G~~qrv~lara 146 (222)
T cd03224 77 IGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RLK----ERRKQLAGTLSGGEQQMLAIARA 146 (222)
T ss_pred eEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hhh----hhhhCchhhCCHHHHHHHHHHHH
Confidence 999999998876 59999998764321 1 12222333321 111 12334567899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 147 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999998866544336899999999999875 58999999999999999887764
No 438
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=371.25 Aligned_cols=212 Identities=22% Similarity=0.362 Sum_probs=176.5
Q ss_pred EEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChH-HhhhceEEE
Q 000351 1241 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKILGII 1319 (1623)
Q Consensus 1241 ~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~-~lR~~i~~v 1319 (1623)
++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+.. .+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 3699999999999999999999999999999999999999999999999999766543 457789999
Q ss_pred cCCCccccc-cHHhhcCCCC----C--CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhc
Q 000351 1320 PQSPVLFSG-TVRFNLDPFS----E--HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 1392 (1623)
Q Consensus 1320 pQdp~Lf~g-TIr~NLd~~~----~--~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~ 1392 (1623)
||++.+|.. |+++|+.... . .+.++..+ .+.+.++.+ |++........+||||||||++|||||++
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 999987754 9999997421 1 12222221 122333332 45444455567899999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1393 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1393 ~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 999999999999999999999999998864 47899999999999876 9999999999999999998864
No 439
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-35 Score=335.74 Aligned_cols=204 Identities=22% Similarity=0.329 Sum_probs=169.5
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc---CCCCCeEEE-------------
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP---PVSDASAVI------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~---~~~g~~~~~------------- 677 (1623)
.|+++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++ |++| .+.+
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G-~i~~~g~~i~~~~~~~~ 77 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDG-LVEIEGKDVKNQDVVAL 77 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCce-EEEECCEecccCCHHHH
Confidence 4789999999963 579999999999999999999999999999999999974 5778 3332
Q ss_pred cCcEEEEccCcccCcccHHHHHhcCCC---C------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 678 RGTVAYVPQVSWIFNATVRDNILFGSA---F------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 678 ~~~iay~~Q~~~l~~~Tv~enI~~g~~---~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+..|+|++|++.+++.|++||+.++.. . .+++..+.++.+++.+.+.. .....+.+||||||||
T Consensus 78 ~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qr 150 (246)
T PRK14269 78 RKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQR 150 (246)
T ss_pred hhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHH
Confidence 235999999999999999999987521 1 11244566777777544432 1344667899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
++||||++++|+++||||||++||+.+..++.+.+.. ..+++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 151 v~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 151 LCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFF 229 (246)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999875544 345899999999999876 58999999999999999999876
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
..
T Consensus 230 ~~ 231 (246)
T PRK14269 230 EN 231 (246)
T ss_pred hC
Confidence 43
No 440
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-35 Score=341.58 Aligned_cols=205 Identities=26% Similarity=0.446 Sum_probs=167.3
Q ss_pred cEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------
Q 000351 614 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------- 677 (1623)
.|+++|+++.|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|. +.+
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~-i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGT-ITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE-EEECCEECccccccchH
Confidence 478999999997321 257999999999999999999999999999999999999999983 322
Q ss_pred ---cCcEEEEccCc--ccCcccHHHHHhcCC---CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 ---RGTVAYVPQVS--WIFNATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 ---~~~iay~~Q~~--~l~~~Tv~enI~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..|+|++|+| .+++.|++|||.++. ..+. ++..+.++.+++..++ ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 12589999998 467889999998752 1222 2345556666664221 123446899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
|||++|||||+.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++++. .||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998765543345899999999999875 58999999999999999999
Q ss_pred HHhhc
Q 000351 825 DLSNN 829 (1623)
Q Consensus 825 ~l~~~ 829 (1623)
++...
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 87653
No 441
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-35 Score=369.76 Aligned_cols=211 Identities=26% Similarity=0.370 Sum_probs=174.2
Q ss_pred cEEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCCh-HHhhhce
Q 000351 1238 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRKIL 1316 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~-~~lR~~i 1316 (1623)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. ..+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 369999999999999999999999999999999999999999999999999976543 3467889
Q ss_pred EEEcCCCccccc-cHHhhcCCCC-----C-CCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHh
Q 000351 1317 GIIPQSPVLFSG-TVRFNLDPFS-----E-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 1389 (1623)
Q Consensus 1317 ~~vpQdp~Lf~g-TIr~NLd~~~-----~-~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARA 1389 (1623)
+|+||++.+|.. |+++|+.... . ....+..+ .+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lara 154 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHHH
Confidence 999999998876 9999997421 1 11111111 122333332 33333334456799999999999999
Q ss_pred hhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecCh
Q 000351 1390 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1390 LL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp 1457 (1623)
|+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 999999999999999999999999999999864 47899999999999877 999999999999977654
No 442
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=4.1e-33 Score=376.38 Aligned_cols=95 Identities=14% Similarity=0.245 Sum_probs=84.5
Q ss_pred hhcCCCCCChhHHHHHHHHHhhhcC--CcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEE
Q 000351 1369 VSEAGENFSVGQRQLLSLSRALLRR--SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 1445 (1623)
Q Consensus 1369 v~e~G~~LSgGQrQrLaLARALL~~--p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~V 1445 (1623)
++....+|||||-||+-||+.|=.+ -=+.||||||.+|-+.--..+.++|++.. .|.|||+|-|+.++|+.||.|+-
T Consensus 1381 L~R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEPSiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~AD~iid 1460 (1809)
T PRK00635 1381 LGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIH 1460 (1809)
T ss_pred ccCCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCCCcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEE
Confidence 3456778999999999999999776 24679999999999999999999998876 58999999999999999999999
Q ss_pred Ee------CceEeeecChhHHhhc
Q 000351 1446 LD------SGRVLEYDTPEELLSN 1463 (1623)
Q Consensus 1446 l~------~G~ive~Gtp~eLl~~ 1463 (1623)
|- .|+|+.+|+|++++++
T Consensus 1461 iGPgAG~~GG~iv~~G~~~~l~~~ 1484 (1809)
T PRK00635 1461 LGPGSGPQGGYLLSTSALKQSQPD 1484 (1809)
T ss_pred eCCCccCCCCEEEecCCHHHHhhh
Confidence 93 6999999999999753
No 443
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=340.47 Aligned_cols=205 Identities=24% Similarity=0.399 Sum_probs=171.7
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCC--CeEEE-------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD--ASAVI------------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g--~~~~~------------- 677 (1623)
..++++|+++.|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++| +.+.+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 469999999999642 35799999999999999999999999999999999999999872 24432
Q ss_pred cCcEEEEccCcc--cCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 678 RGTVAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 678 ~~~iay~~Q~~~--l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
+..|||++|+|. +++.||+|||.++.. .+. ++..+.++.+++.+..+..| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 235999999984 568899999987632 222 33556677777765555444 5899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHh
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
++||||++.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999886654333 389999999999999889999999999999999998876
Q ss_pred hc
Q 000351 828 NN 829 (1623)
Q Consensus 828 ~~ 829 (1623)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 54
No 444
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=335.74 Aligned_cols=205 Identities=24% Similarity=0.369 Sum_probs=167.9
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCC-----CCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~-----~g~~~~~---------- 677 (1623)
..++++|+++.|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|. +.+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~-i~~~g~~i~~~~~ 81 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGN-VIYEGKNIYSNNF 81 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceE-EEECCEecccccc
Confidence 46999999999963 56999999999999999999999999999999999999874 663 221
Q ss_pred -----cCcEEEEccCcccCcccHHHHHhcCCC----CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 -----RGTVAYVPQVSWIFNATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~~~Tv~enI~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
+..|+|++|++.+++.||+|||.++.. .+. ++..++++.+++.+.+. + .....+.+||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~----~~~~~~~~LSgG 154 (254)
T PRK14273 82 DILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---D----KLNTNALSLSGG 154 (254)
T ss_pred cHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---H----HHhCCcccCCHH
Confidence 235999999999988999999987632 121 23344555555532221 1 123456789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
|||||+||||++.+|+++||||||++||+.+.+.+++.+.. ..+++|+|++||+++++. .||+|++|++|++++.|++
T Consensus 155 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 233 (254)
T PRK14273 155 QQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESST 233 (254)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999885544 345799999999999975 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.++
T Consensus 234 ~~~~~~ 239 (254)
T PRK14273 234 DELFFN 239 (254)
T ss_pred HHHHhC
Confidence 988643
No 445
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.1e-34 Score=334.68 Aligned_cols=204 Identities=28% Similarity=0.408 Sum_probs=167.0
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCC-----CCCeEEE-----------
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAVI----------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~-----~g~~~~~----------- 677 (1623)
+++++|++++|+. +++++|+||+|++||+++|+|+||||||||+++|+|.++|+ +|. +.+
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~-i~~~g~~~~~~~~~ 76 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGK-VLFDGQDIYDKKID 76 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceE-EEECCEEccccccc
Confidence 3789999999963 46999999999999999999999999999999999999987 883 322
Q ss_pred ----cCcEEEEccCcccCcccHHHHHhcCCC----CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 ----RGTVAYVPQVSWIFNATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 ----~~~iay~~Q~~~l~~~Tv~enI~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..|+|+||++.+++.|++||+.++.. .+. ++..++++..++.+.++ ........+|||||
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~ 149 (247)
T TIGR00972 77 VVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQ 149 (247)
T ss_pred hHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHH
Confidence 235999999999988999999987521 121 23445556666653221 12344557899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
|||++||||++.+|+++||||||++||+.+.+.+++.+.. ..+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 150 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 228 (247)
T TIGR00972 150 QQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTE 228 (247)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999875544 334589999999999876 58999999999999999998
Q ss_pred HHhhc
Q 000351 825 DLSNN 829 (1623)
Q Consensus 825 ~l~~~ 829 (1623)
++...
T Consensus 229 ~~~~~ 233 (247)
T TIGR00972 229 QIFTN 233 (247)
T ss_pred HHHhC
Confidence 87643
No 446
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.6e-35 Score=326.65 Aligned_cols=193 Identities=25% Similarity=0.322 Sum_probs=165.6
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|+.. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .. .|+++++
T Consensus 3 l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~-~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGGR--VLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--PD-VAEACHY 77 (207)
T ss_pred EEEEeEEEEECCe--EEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--hh-hHhhcEE
Confidence 7999999999643 69999999999999999999999999999999999999999999999998753 22 7889999
Q ss_pred EcCCCccc-cccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1319 IPQSPVLF-SGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1319 vpQdp~Lf-~gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
++|++.++ ..|+++|+.... ...++++.++++..++.+.... ....||||||||++||||++++|
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al~~~p 146 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAHL-----------PFGYLSAGQKRRVALARLLVSNR 146 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHcC-----------ChhhcCHHHHHHHHHHHHHhcCC
Confidence 99988776 569999986421 2345567777777777653322 22479999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEEEeC
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDS 1448 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1448 (1623)
++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. |+++-++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 147 PIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999999999998753 57899999999999988 99988754
No 447
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.3e-35 Score=330.12 Aligned_cols=192 Identities=23% Similarity=0.411 Sum_probs=157.7
Q ss_pred EEEEeeEEEcCCCC-CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc---------------
Q 000351 615 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------- 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------- 678 (1623)
++++|++++|++.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|. +.+.
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGE-VLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcE-EEECCEEhhhcCHhHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999984 3221
Q ss_pred --CcEEEEccCcccC-cccHHHHHhcCC---CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 679 --GTVAYVPQVSWIF-NATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 679 --~~iay~~Q~~~l~-~~Tv~enI~~g~---~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
..|+|++|++.++ +.|++||+.++. .++. ++..+.++..++.+.++. ...+||||||||
T Consensus 81 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr 149 (221)
T TIGR02211 81 RNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINH-----------RPSELSGGERQR 149 (221)
T ss_pred HHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHH
Confidence 3599999999887 579999998642 1221 234455566665443333 335899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEE
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVK 818 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~ 818 (1623)
++||||++.+|+++||||||++||+++.+.+.+.+..... .|+|+|++||+++++..+|+|++|++|+++
T Consensus 150 v~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 150 VAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999886554333 389999999999999889999999999875
No 448
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.5e-35 Score=328.93 Aligned_cols=195 Identities=24% Similarity=0.395 Sum_probs=160.0
Q ss_pred EEEEeeEEEcCCCCC-CCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------cCcE
Q 000351 615 ISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTV 681 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~-~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i 681 (1623)
++++|+++.|+.... +++|+|+||++++|++++|+|+||||||||+++|+|+++|++| .+.+ +..+
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAG-FATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCc-eEEECCEEcccCHHHHHhhE
Confidence 689999999974211 2799999999999999999999999999999999999999998 4333 2359
Q ss_pred EEEccCcccCc-ccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 682 AYVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 682 ay~~Q~~~l~~-~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
+|++|++.++. .|++||+.+... .+ .++..+.++..++.+.++ ....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLD-----------RRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------hhhhhcCHHHHHHHHHHH
Confidence 99999998886 599999975321 12 233455566666654333 345689999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
|++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++. .||++++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998866554445899999999999876 58999999999998754
No 449
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=336.57 Aligned_cols=204 Identities=30% Similarity=0.438 Sum_probs=169.8
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cC
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 679 (1623)
..++++|+++.|++ .++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+ +.
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~-I~~~g~~i~~~~~~~~~~ 83 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGE-IKIDGITISKENLKEIRK 83 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce-EEECCEecCcCCHHHHhc
Confidence 46999999999963 2467999999999999999999999999999999999999999983 322 23
Q ss_pred cEEEEccCcc--cCcccHHHHHhcCCC---CCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~~--l~~~Tv~enI~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.|+|++|+|. +++.|++|||.++.. ++.+ +..++++..++.+.++.. ..+||||||||++
T Consensus 84 ~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~ 152 (271)
T PRK13632 84 KIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVA 152 (271)
T ss_pred ceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHH
Confidence 5999999984 457899999987521 2332 244556666766554443 3589999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|||||+.+|+++||||||++||+.+.+.+++.+.....+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 153 IASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999866554334 5899999999999888999999999999999998887654
No 450
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-34 Score=332.55 Aligned_cols=200 Identities=28% Similarity=0.455 Sum_probs=165.3
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------cC
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------RG 679 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------~~ 679 (1623)
++++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|. +.+ +.
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 77 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGD-LIVDGLKVNDPKVDERLIRQ 77 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceE-EEECCEECCcCChhHHHHhh
Confidence 689999999963 57999999999999999999999999999999999999999983 332 22
Q ss_pred cEEEEccCcccC-cccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~~l~-~~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.++|++|++.++ ..||+||+.++. ..+. ++..++++..++.+.++ .....||||||||++
T Consensus 78 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~ 146 (240)
T PRK09493 78 EAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAH-----------HYPSELSGGQQQRVA 146 (240)
T ss_pred ceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHh-----------cChhhcCHHHHHHHH
Confidence 599999999887 579999998752 1222 23344455555543333 344689999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||||++.+|+++||||||++||+++.+.+.+.+.....+|+|+|++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 147 IARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999999988655443458999999999999864 899999999999999999887643
No 451
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.4e-34 Score=329.71 Aligned_cols=196 Identities=25% Similarity=0.378 Sum_probs=162.5
Q ss_pred CcEEEEeeEEEcCCCCC-CCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------
Q 000351 613 PAISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~-~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------- 678 (1623)
+.++++|++++|++... .++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+.
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~-i~~~g~~~~~~~~~~~~ 83 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGE-VSLVGQPLHQMDEEARA 83 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCee-EEECCEEcccCCHHHHH
Confidence 46999999999974221 35999999999999999999999999999999999999999984 3221
Q ss_pred ----CcEEEEccCcccCc-ccHHHHHhcCC---CCC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 679 ----GTVAYVPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 679 ----~~iay~~Q~~~l~~-~Tv~enI~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
..++|++|++.++. .|++||+.++. ..+ .++..+.++.+++.+.++..+ .+||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~ 152 (228)
T PRK10584 84 KLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQ 152 (228)
T ss_pred HHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHH
Confidence 35999999998875 69999997642 112 234566677777765554433 47999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEe
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 820 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~ 820 (1623)
||++||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++++..||++++|++|+++++
T Consensus 153 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 153 QRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999886655433 38999999999999888999999999998753
No 452
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=338.01 Aligned_cols=205 Identities=27% Similarity=0.418 Sum_probs=172.8
Q ss_pred CcEEEEeeEEEcCCCC---CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE------------
Q 000351 613 PAISIRNGYFSWDSKA---ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------ 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~---~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~------------ 677 (1623)
+.++++|++++|++.. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|. +.+
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~-i~i~g~~i~~~~~~~ 81 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGK-VYVDGLDTSDEENLW 81 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCEeccccccHH
Confidence 3689999999997421 357999999999999999999999999999999999999999983 322
Q ss_pred --cCcEEEEccCcc--cCcccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 678 --RGTVAYVPQVSW--IFNATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 678 --~~~iay~~Q~~~--l~~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
+..++|++|+|. +++.|+.||+.|+.. .+ +++++++++.+++.+.++..+ .+||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~ 150 (280)
T PRK13633 82 DIRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQK 150 (280)
T ss_pred HHhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHH
Confidence 235999999985 567799999988632 22 234566777788876655544 58999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhH
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 825 (1623)
||++||||++.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++.+..||++++|++|+++++|++++
T Consensus 151 qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~ 230 (280)
T PRK13633 151 QRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKE 230 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHH
Confidence 999999999999999999999999999999999876554333 4899999999999988899999999999999999999
Q ss_pred Hhhc
Q 000351 826 LSNN 829 (1623)
Q Consensus 826 l~~~ 829 (1623)
+...
T Consensus 231 ~~~~ 234 (280)
T PRK13633 231 IFKE 234 (280)
T ss_pred HhcC
Confidence 8754
No 453
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-35 Score=327.12 Aligned_cols=192 Identities=23% Similarity=0.413 Sum_probs=158.9
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc---------CcEEEEc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR---------GTVAYVP 685 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~---------~~iay~~ 685 (1623)
++++|+++.|+ ++++++|+||++++|++++|+||||||||||+++|+|.++|++| .+.+. ..++|++
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G-~i~~~g~~~~~~~~~~i~~~~ 76 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSG-EVLFDGKPLDIAARNRIGYLP 76 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCce-EEEECCCchhHHHHccEEEec
Confidence 46899999996 35799999999999999999999999999999999999999998 44443 3599999
Q ss_pred cCcccCc-ccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000351 686 QVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 757 (1623)
Q Consensus 686 Q~~~l~~-~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~ 757 (1623)
|++.++. .|++||+.++.. .. +++..+.++..++....+ ....+||||||||++||||++.
T Consensus 77 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~al~~ 145 (210)
T cd03269 77 EERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYAN-----------KRVEELSKGNQQKVQFIAAVIH 145 (210)
T ss_pred cCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHh-----------CcHhhCCHHHHHHHHHHHHHhc
Confidence 9998875 699999976421 11 223445555555544333 3446899999999999999999
Q ss_pred CCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 758 NSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 758 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 146 ~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 146 DPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998866554445899999999999886 48999999999998654
No 454
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=337.54 Aligned_cols=205 Identities=23% Similarity=0.339 Sum_probs=170.8
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 680 (1623)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|.++|++| .+.+ +..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEG-KVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCC-EEEECCEECCcCCHHHHhcc
Confidence 58999999999743234699999999999999999999999999999999999999999 4333 235
Q ss_pred EEEEccCcc--cCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 681 VAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 681 iay~~Q~~~--l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
|+|++|+|. +++.||.|||.++.. ... +++..+++.+++.+..+. ....||||||||++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 151 (277)
T PRK13642 83 IGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAV 151 (277)
T ss_pred eEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHH
Confidence 999999984 568899999986521 222 234566677777544333 335899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhcC
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 830 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 830 (1623)
||||+.+|+++||||||++||+.+.+.+.+.+.....+ |+|+|++||+++++..||+|++|++|++++.|+++++....
T Consensus 152 AraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (277)
T PRK13642 152 AGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATS 231 (277)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 99999999999999999999999999998865543333 89999999999999889999999999999999999887543
No 455
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.1e-34 Score=338.34 Aligned_cols=202 Identities=23% Similarity=0.369 Sum_probs=166.4
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------- 677 (1623)
..++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~-i~~~g~~i~~~~~~~~~~ 81 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGE-ILFDGENIPAMSRSRLYT 81 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCEEccccChhhHHH
Confidence 4699999999996 357999999999999999999999999999999999999999984 322
Q ss_pred -cCcEEEEccCcccCc-ccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHH
Q 000351 678 -RGTVAYVPQVSWIFN-ATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 747 (1623)
Q Consensus 678 -~~~iay~~Q~~~l~~-~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkq 747 (1623)
+..++|++|++.++. .|++||+.++. ..+. ++..+.++..++.+..+. ...+|||||||
T Consensus 82 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~q 150 (269)
T PRK11831 82 VRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKL-----------MPSELSGGMAR 150 (269)
T ss_pred HhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHH
Confidence 235999999999886 59999997642 1222 223344555555433322 33589999999
Q ss_pred HHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhH
Q 000351 748 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 825 (1623)
Q Consensus 748 RvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 825 (1623)
|++||||++.+|+++||||||++||+.+.+.+.+.+..... +|+|+|++||+++++.. ||+|++|++|++++.|++++
T Consensus 151 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 230 (269)
T PRK11831 151 RAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQA 230 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999886654333 38999999999998865 89999999999999999999
Q ss_pred Hhhc
Q 000351 826 LSNN 829 (1623)
Q Consensus 826 l~~~ 829 (1623)
+.+.
T Consensus 231 ~~~~ 234 (269)
T PRK11831 231 LQAN 234 (269)
T ss_pred HhcC
Confidence 8754
No 456
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-34 Score=368.22 Aligned_cols=214 Identities=23% Similarity=0.398 Sum_probs=175.5
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccC--CCcEEEECCEecCCCChHH-hhhc
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMD-LRKI 1315 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p--~~G~I~IdG~di~~i~~~~-lR~~ 1315 (1623)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.++|.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3699999999999999999999999999999999999987 7999999999998877654 4567
Q ss_pred eEEEcCCCccccc-cHHhhcCCCCC-------CCHHHHHHHHHHhcHHHHHHhccCCcchhh-hcCCCCCChhHHHHHHH
Q 000351 1316 LGIIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQV-SEAGENFSVGQRQLLSL 1386 (1623)
Q Consensus 1316 i~~vpQdp~Lf~g-TIr~NLd~~~~-------~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v-~e~G~~LSgGQrQrLaL 1386 (1623)
++||||+|.+|.. |+++|+..... ...++..+ .+.+.++.+ |++... ......||||||||++|
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~i 152 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVEI 152 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHHH
Confidence 9999999988875 99999964211 11111111 122333332 332221 12245799999999999
Q ss_pred HHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEeeecChhHHh
Q 000351 1387 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 1461 (1623)
Q Consensus 1387 ARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~Gtp~eLl 1461 (1623)
||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999998864 47899999999999987 9999999999999999887653
No 457
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-35 Score=327.37 Aligned_cols=190 Identities=21% Similarity=0.367 Sum_probs=158.2
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc------------CcEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------GTVA 682 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------~~ia 682 (1623)
|+++|+++.|+. +++++|+||++++| +++|+||||||||||+++|+|+++|++| .+.+. ..++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSG-TIRIDGQDVLKQPQKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCcc-EEEECCCccccchHHHHhheE
Confidence 478999999963 47999999999999 9999999999999999999999999999 44332 3599
Q ss_pred EEccCcccCc-ccHHHHHhcCC---CCC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 683 YVPQVSWIFN-ATVRDNILFGS---AFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 683 y~~Q~~~l~~-~Tv~enI~~g~---~~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
|++|++.++. .|++||+.+.. ..+ .++..+.++.+++.+..+. ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKK-----------KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhC-----------chhhCCHHHHHHHHHHHH
Confidence 9999999885 59999997632 112 2344556677777654432 335799999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
++++|+++||||||++||+.+.+++.+.+.. ..+++|+|++||+++++. .||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999886544 334699999999999986 58999999999998764
No 458
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=6.8e-35 Score=324.92 Aligned_cols=192 Identities=22% Similarity=0.305 Sum_probs=162.1
Q ss_pred EEEEEEEEEeCCCCCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEECCEecCCCChHHhhhceEE
Q 000351 1239 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 1318 (1623)
Q Consensus 1239 I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~ 1318 (1623)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+ ...|++++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGER--MLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 5789999999643 6999999999999999999999999999999999999999999999999998765 456788999
Q ss_pred EcCCCcccc-ccHHhhcCCCC---CCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCChhHHHHHHHHHhhhcCC
Q 000351 1319 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 1394 (1623)
Q Consensus 1319 vpQdp~Lf~-gTIr~NLd~~~---~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LSgGQrQrLaLARALL~~p 1394 (1623)
+||++.+|. .|+++|+..+. ...++++.++++..++.++..+ ...+||||||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFEDL-----------PAAQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHhcC-----------ChhhcCHHHHHHHHHHHHHhcCC
Confidence 999998886 59999996321 1123457777777777655432 23579999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhccCEEEE
Q 000351 1395 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 1445 (1623)
Q Consensus 1395 ~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~~DrI~V 1445 (1623)
++|||||||++||+.+.+.+.+.|++.. ++.|+|+|||+...+ .||+++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc-cceEEee
Confidence 9999999999999999999999999863 578999999998443 3577654
No 459
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=335.62 Aligned_cols=202 Identities=27% Similarity=0.434 Sum_probs=166.4
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------- 677 (1623)
..++++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|. +.+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~-i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGS-IVVNGQTINLVRDKDGQL 79 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeE-EEECCEEccccccccccc
Confidence 46999999999963 57999999999999999999999999999999999999999883 221
Q ss_pred -----------cCcEEEEccCcccCc-ccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCC
Q 000351 678 -----------RGTVAYVPQVSWIFN-ATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGER 737 (1623)
Q Consensus 678 -----------~~~iay~~Q~~~l~~-~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~ 737 (1623)
+..++|++|++.++. .|++||+.++. ..+. ++..+.++..++.+.+ .+..
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~ 149 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKY 149 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCC
Confidence 235999999999885 69999997642 1221 2333444554543322 1234
Q ss_pred CCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCE
Q 000351 738 GVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 816 (1623)
Q Consensus 738 g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 816 (1623)
..+||||||||++|||||+++|+++||||||++||+.+.+.+.+.+.....+|+|+|+|||+++++.. ||+|++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 56899999999999999999999999999999999999999988655433458999999999999885 89999999999
Q ss_pred EEEecChhHHhh
Q 000351 817 VKEEGTFEDLSN 828 (1623)
Q Consensus 817 i~~~g~~~~l~~ 828 (1623)
+++.|+++++..
T Consensus 230 i~~~~~~~~~~~ 241 (257)
T PRK10619 230 IEEEGAPEQLFG 241 (257)
T ss_pred EEEeCCHHHhhh
Confidence 999999988764
No 460
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=334.42 Aligned_cols=205 Identities=27% Similarity=0.383 Sum_probs=169.1
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc-----CCCCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~-----~~~g~~~~~---------- 677 (1623)
..++++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++ |++|. +.+
T Consensus 12 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~-i~~~g~~~~~~~~ 87 (260)
T PRK10744 12 SKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGE-ILLDGENILTPKQ 87 (260)
T ss_pred ceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceE-EEECCEEcccccc
Confidence 46999999999963 479999999999999999999999999999999999986 46773 221
Q ss_pred -----cCcEEEEccCcccCcccHHHHHhcCCC----CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 -----RGTVAYVPQVSWIFNATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~~~Tv~enI~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
+.+|+|++|++.++..|++||+.++.. .+. ++..++++..++..++. ...+....+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 235999999999988999999987532 222 23445566666543322 1245566789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
||||++||||++.+|+++||||||++||+.+.+.+.+.+... .+++|+|++||+++.+. .||++++|++|++++.|+.
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITEL-KQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999998765543 45789999999999886 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.+.
T Consensus 240 ~~~~~~ 245 (260)
T PRK10744 240 DTIFTK 245 (260)
T ss_pred HHHHhC
Confidence 888643
No 461
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=336.55 Aligned_cols=202 Identities=30% Similarity=0.469 Sum_probs=169.4
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.++++|++++|+. .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++| .+.+. ..
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G-~i~~~g~~~~~~~~~~~~~~ 79 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSG-SVLIRGEPITKENIREVRKF 79 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCce-EEEECCEECCcCCHHHHHhh
Confidence 5889999999963 24699999999999999999999999999999999999999998 43322 24
Q ss_pred EEEEccCcc--cCcccHHHHHhcCC---CCCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 681 VAYVPQVSW--IFNATVRDNILFGS---AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 681 iay~~Q~~~--l~~~Tv~enI~~g~---~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
++|++|+|. +++.||+||+.++. ..+++ ++++.++.+++.+.++..+ ..||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~l 148 (277)
T PRK13652 80 VGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAI 148 (277)
T ss_pred eEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHH
Confidence 999999983 67889999998653 23332 3456667777765554433 5899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||||+.+|+++||||||++||+.+.+.+.+.+.....+ |+|+|++||+++++. .||+|++|++|++++.|+++++.+.
T Consensus 149 araL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 149 AGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999998866543333 899999999999985 6899999999999999999998754
No 462
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=333.27 Aligned_cols=202 Identities=27% Similarity=0.427 Sum_probs=164.7
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-------------cCcE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTV 681 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~i 681 (1623)
++++|++++|++. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+ +..+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~i 77 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGE-IFIDGEDIREQDPVELRRKI 77 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce-EEECCeEcCcCChHHhhcce
Confidence 4689999999731 56999999999999999999999999999999999999999984 332 2358
Q ss_pred EEEccCcccC-cccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 682 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 682 ay~~Q~~~l~-~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
+|++|++.++ ..|++||+.++.. .+. ++..+.++..++... ......+.+||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 78 GYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHH
Confidence 9999999888 5799999987521 221 233444555554420 1123455789999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
|++.+|+++||||||++||+.+.+.+.+.+..... +|+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 99999999999999999999999999886655433 3899999999999865 589999999999999999888754
No 463
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=335.45 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=169.1
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------- 678 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------- 678 (1623)
+..++++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++| .+.+.
T Consensus 9 ~~~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~ 84 (265)
T PRK10575 9 DTTFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEG-EILLDAQPLESWSSKAFA 84 (265)
T ss_pred CceEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCC-EEEECCEehhhCCHHHHh
Confidence 357999999999963 5799999999999999999999999999999999999999998 44332
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC--------C---CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA--------F---EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 746 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~--------~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQk 746 (1623)
..++|++|++.++ ..|++||+.++.. . ++++....++.+++.+.++..+ .+||||||
T Consensus 85 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~ 153 (265)
T PRK10575 85 RKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGER 153 (265)
T ss_pred hheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHH
Confidence 2599999998765 5699999987521 1 1234566677777765444433 47999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 747 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 747 qRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
||++||||++.+|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++++. .||+|++|++|++++.|+.+
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~ 233 (265)
T PRK10575 154 QRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPA 233 (265)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHH
Confidence 999999999999999999999999999999999876554333 3899999999999985 58999999999999999998
Q ss_pred HHhh
Q 000351 825 DLSN 828 (1623)
Q Consensus 825 ~l~~ 828 (1623)
++..
T Consensus 234 ~~~~ 237 (265)
T PRK10575 234 ELMR 237 (265)
T ss_pred HhcC
Confidence 8764
No 464
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=336.10 Aligned_cols=207 Identities=18% Similarity=0.294 Sum_probs=167.0
Q ss_pred CCCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc-----CCCCCeEEE--------
Q 000351 611 GLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAVI-------- 677 (1623)
Q Consensus 611 ~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~-----~~~g~~~~~-------- 677 (1623)
..+.++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|. +.+
T Consensus 18 ~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~-i~~~g~~i~~~ 93 (268)
T PRK14248 18 KEHILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGE-ILYEGLNILDS 93 (268)
T ss_pred CCceEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceE-EEECCEEcccc
Confidence 3457999999999963 579999999999999999999999999999999999864 67773 322
Q ss_pred -------cCcEEEEccCcccCcccHHHHHhcCCCC----C----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccC
Q 000351 678 -------RGTVAYVPQVSWIFNATVRDNILFGSAF----E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 678 -------~~~iay~~Q~~~l~~~Tv~enI~~g~~~----~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
+..++|++|++.+++.|++||+.++... . +++..++++.+++...+. ...+..+.+||
T Consensus 94 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 166 (268)
T PRK14248 94 NINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLS 166 (268)
T ss_pred cccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCC
Confidence 2359999999999988999999865211 1 122333444444432211 12345667899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
||||||++||||++.+|+++||||||++||+.+.+.+.+.+.. ..+++|+|++||+++++. .||+|++|++|++++.|
T Consensus 167 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 245 (268)
T PRK14248 167 GGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYD 245 (268)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999999875544 445789999999999876 58999999999999999
Q ss_pred ChhHHhhc
Q 000351 822 TFEDLSNN 829 (1623)
Q Consensus 822 ~~~~l~~~ 829 (1623)
+++++..+
T Consensus 246 ~~~~~~~~ 253 (268)
T PRK14248 246 QTEQIFTS 253 (268)
T ss_pred CHHHHHhC
Confidence 99887654
No 465
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=8.5e-35 Score=330.65 Aligned_cols=198 Identities=25% Similarity=0.369 Sum_probs=160.7
Q ss_pred EEEEEEEEEeCC----C-CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEEC--C--EecCCCCh
Q 000351 1239 IKFEDVVLRYRP----E-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILID--G--FDIAKFGL 1309 (1623)
Q Consensus 1239 I~~~nVs~~Y~~----~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~Id--G--~di~~i~~ 1309 (1623)
|+++|++++|+. + .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+| | .++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999953 1 1369999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---h-hhceEEEcCCCccccc-cHHhhcCCC---CCCC----HHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCCCC
Q 000351 1310 MD---L-RKILGIIPQSPVLFSG-TVRFNLDPF---SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1377 (1623)
Q Consensus 1310 ~~---l-R~~i~~vpQdp~Lf~g-TIr~NLd~~---~~~s----d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~LS 1377 (1623)
.. + +++++|+||+|.++.. |+++|+... .... ++++.++++..++.+. .....+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPER----------LWHLPPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh----------hhhCCcccCC
Confidence 43 3 4579999999988865 999998631 1111 1233334444333221 1233456899
Q ss_pred hhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEE
Q 000351 1378 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 1446 (1623)
Q Consensus 1378 gGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl 1446 (1623)
||||||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||||+.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999999864 47899999999998875 9999876
No 466
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.5e-34 Score=334.29 Aligned_cols=201 Identities=30% Similarity=0.447 Sum_probs=165.3
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------- 677 (1623)
.++++|+++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~ 78 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGT-IRVGDITIDTARSLSQQKG 78 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeE-EEECCEEccccccccchhh
Confidence 4899999999963 57999999999999999999999999999999999999999884 321
Q ss_pred -----cCcEEEEccCcccC-cccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccCh
Q 000351 678 -----RGTVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 743 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~-~~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 743 (1623)
+..++|++|++.++ ..|++||+.++. ..+. ++..+.++..++... ......+|||
T Consensus 79 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~ 147 (250)
T PRK11264 79 LIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGK-----------ETSYPRRLSG 147 (250)
T ss_pred HHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-----------hhCChhhCCh
Confidence 23599999999887 579999997641 1222 223344444444322 2345578999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecC
Q 000351 744 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 744 GQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 822 (1623)
|||||++||||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++.. ||+|++|++|++++.|+
T Consensus 148 Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 148 GQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999988655444458999999999999864 89999999999999999
Q ss_pred hhHHhhc
Q 000351 823 FEDLSNN 829 (1623)
Q Consensus 823 ~~~l~~~ 829 (1623)
.+++.+.
T Consensus 228 ~~~~~~~ 234 (250)
T PRK11264 228 AKALFAD 234 (250)
T ss_pred HHHHhcC
Confidence 9887643
No 467
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=350.44 Aligned_cols=204 Identities=26% Similarity=0.407 Sum_probs=169.4
Q ss_pred cEEEEeeEEEcCCCC---------------------CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCC
Q 000351 614 AISIRNGYFSWDSKA---------------------ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD 672 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~---------------------~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g 672 (1623)
.|+++|+++.|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 478888888776431 12379999999999999999999999999999999999999998
Q ss_pred CeEEEc-----------------CcEEEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCC
Q 000351 673 ASAVIR-----------------GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLP 727 (1623)
Q Consensus 673 ~~~~~~-----------------~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~ 727 (1623)
.+.+. ..++|++|++.+| +.||+|||.++.. ++ .++..+.++.++|.+..+..|
T Consensus 84 -~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 84 -QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred -EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc
Confidence 33321 3699999999988 5799999987632 22 234556677777765555444
Q ss_pred CCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-h
Q 000351 728 GGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-Q 805 (1623)
Q Consensus 728 ~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~ 805 (1623)
.+|||||||||+|||||+.+|+++||||||++||+.+.+.+.+.+..... .|+|+|+|||+++++. .
T Consensus 163 -----------~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~ 231 (400)
T PRK10070 163 -----------DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRI 231 (400)
T ss_pred -----------ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHh
Confidence 48999999999999999999999999999999999999999887665433 4899999999999875 5
Q ss_pred cCEEEEEeCCEEEEecChhHHhhc
Q 000351 806 VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 806 ~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||+|++|++|++++.|+++++...
T Consensus 232 ~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 232 GDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCEEEEEECCEEEecCCHHHHHhC
Confidence 899999999999999999998765
No 468
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-34 Score=338.03 Aligned_cols=202 Identities=28% Similarity=0.494 Sum_probs=173.1
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc------------CcE
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------GTV 681 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------~~i 681 (1623)
.++++|+++.|+. ++.+|+||||+|++|+++|++||||||||||+++|+|.+.|++| .+.+. .+|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G-~i~i~G~~~~~~~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSG-EILVLGYDVVKEPAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCce-EEEEcCEeCccCHHHHHhhe
Confidence 5788999999973 36899999999999999999999999999999999999999999 44433 359
Q ss_pred EEEccCcccC-cccHHHHHhcC-----CC--CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 682 AYVPQVSWIF-NATVRDNILFG-----SA--FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 682 ay~~Q~~~l~-~~Tv~enI~~g-----~~--~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
||+||+|.++ ..|++||+.|. .+ .++++.+++++..+|.++. ..+..+||||||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 9999999876 78999999763 21 2346777888888877622 2234689999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCC-cEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSG-KTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~-~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||.++|+++|||||||||||.++..+++.+.....+| +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998766655556 799999999999876 899999999999999999887543
No 469
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=338.61 Aligned_cols=205 Identities=23% Similarity=0.414 Sum_probs=166.3
Q ss_pred cEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------
Q 000351 614 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~-------------- 677 (1623)
.++++|++++|++.. .+++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~-i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGS-VRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceE-EEECCEEccccccccCH
Confidence 378999999997421 146999999999999999999999999999999999999999984 322
Q ss_pred ---cCcEEEEccCc--ccCcccHHHHHhcCCC---CCHHH----HHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 ---RGTVAYVPQVS--WIFNATVRDNILFGSA---FEPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 ---~~~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..|+|++|++ .+++.|++|||.++.. .+.+. ..++++..++.+. .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 13489999998 5778899999987521 22222 2334445555321 1233456899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
|||++||||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998866544335899999999999886 58999999999999999998
Q ss_pred HHhhc
Q 000351 825 DLSNN 829 (1623)
Q Consensus 825 ~l~~~ 829 (1623)
++.+.
T Consensus 231 ~~~~~ 235 (280)
T PRK13649 231 DIFQD 235 (280)
T ss_pred HHhcC
Confidence 87654
No 470
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=339.33 Aligned_cols=207 Identities=24% Similarity=0.389 Sum_probs=165.0
Q ss_pred CcEEEEeeEEEcCCCC--CCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEE--------------
Q 000351 613 PAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------- 676 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~-------------- 676 (1623)
..|+++|++++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|.++|++|....
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 3589999999996421 136999999999999999999999999999999999999999984311
Q ss_pred ---EcCcEEEEccCcc--cCcccHHHHHhcCCC---CCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 677 ---IRGTVAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 677 ---~~~~iay~~Q~~~--l~~~Tv~enI~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
.+..|+|++|+|. +++.|++|||.++.. ...+ +..+.++..++..+ ..+....+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCHH
Confidence 1235999999984 567899999987532 2221 22233444443211 123455789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecC
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~ 822 (1623)
||||++||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999876554333 3899999999999875 589999999999999999
Q ss_pred hhHHhhc
Q 000351 823 FEDLSNN 829 (1623)
Q Consensus 823 ~~~l~~~ 829 (1623)
++++.+.
T Consensus 235 ~~~~~~~ 241 (289)
T PRK13645 235 PFEIFSN 241 (289)
T ss_pred HHHHhcC
Confidence 9887654
No 471
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-34 Score=347.54 Aligned_cols=188 Identities=29% Similarity=0.445 Sum_probs=159.3
Q ss_pred CCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc---------------------CcEEEEccCc
Q 000351 630 RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR---------------------GTVAYVPQVS 688 (1623)
Q Consensus 630 ~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~---------------------~~iay~~Q~~ 688 (1623)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|. +.+. .+|+|++|++
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~-I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGS-VLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcE-EEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 46899999999999999999999999999999999999999983 3322 3599999999
Q ss_pred ccCc-ccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000351 689 WIFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 760 (1623)
Q Consensus 689 ~l~~-~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~ 760 (1623)
.+++ .||+||+.++.. .++ ++..+.++..+|.+..+..| .+|||||||||+|||||+.+|+
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9985 799999997632 222 34455666777755444333 4799999999999999999999
Q ss_pred EEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 761 VFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 761 illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|+|||||||+||+.+.+.+.+.+..... .++|+|+|||+++++ ..||+|++|++|++++.|+++++..+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999999999987766443 389999999999986 56899999999999999999999754
No 472
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=335.39 Aligned_cols=205 Identities=24% Similarity=0.379 Sum_probs=168.7
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC-----CCCCeEEE---------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAVI--------- 677 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~-----~~g~~~~~--------- 677 (1623)
...|+++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|. +.+
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~-I~~~g~~i~~~~ 92 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGK-ITLDGEDIYDPR 92 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceE-EEECCEECcccc
Confidence 457999999999963 5799999999999999999999999999999999999975 7773 322
Q ss_pred ------cCcEEEEccCcccCcccHHHHHhcCCC---C--C----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccC
Q 000351 678 ------RGTVAYVPQVSWIFNATVRDNILFGSA---F--E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNIS 742 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~~Tv~enI~~g~~---~--~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 742 (1623)
+..++|++|++.+++.|++||+.++.. . . .++..++++.+++.+.+. +..+..+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 235999999999988899999987531 1 1 123455566666644322 12345567899
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEec
Q 000351 743 GGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 743 GGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g 821 (1623)
||||||++||||++.+|+++||||||++||+.+.+++.+.+.. ..+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g 244 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVG 244 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999999875544 445789999999999985 58999999999999999
Q ss_pred ChhHHhh
Q 000351 822 TFEDLSN 828 (1623)
Q Consensus 822 ~~~~l~~ 828 (1623)
+.+++..
T Consensus 245 ~~~~~~~ 251 (267)
T PRK14235 245 DTEKMFT 251 (267)
T ss_pred CHHHHHh
Confidence 9988764
No 473
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2e-34 Score=315.49 Aligned_cols=166 Identities=28% Similarity=0.583 Sum_probs=148.7
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc------------CcEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR------------GTVA 682 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~------------~~ia 682 (1623)
++++|++++|+.. ++++++|+||++++||+++|+||||||||||+++|+|+++|++| .+.+. ..++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G-~i~~~g~~~~~~~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQG-EITLDGVPVSDLEKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCC-EEEECCEEHHHHHHHHHhhEE
Confidence 4789999999742 24799999999999999999999999999999999999999998 44333 3599
Q ss_pred EEccCcccCcccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEE
Q 000351 683 YVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 762 (1623)
Q Consensus 683 y~~Q~~~l~~~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~il 762 (1623)
|++|++++++.|++||+ ..+||||||||++||||++.+|+++
T Consensus 79 ~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~l 120 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIV 120 (178)
T ss_pred EEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999998 3579999999999999999999999
Q ss_pred EEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCCEEEEec
Q 000351 763 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEG 821 (1623)
Q Consensus 763 lLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g 821 (1623)
||||||++||+.+.+.+++.+... .+++|+|++||+.++++.||++++|++|++++.|
T Consensus 121 llDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 121 LLDEPTVGLDPITERQLLSLIFEV-LKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEECCcccCCHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999998866543 4689999999999999889999999999998754
No 474
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-34 Score=327.29 Aligned_cols=188 Identities=27% Similarity=0.467 Sum_probs=157.3
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------c
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------------R 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----------------~ 678 (1623)
++++|+++.|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|. +.+ +
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 78 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQ-VRIAGEDVNRLRGRQLPLLR 78 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCce-EEECCEEcccCCHHHHHHHH
Confidence 789999999952 357999999999999999999999999999999999999999984 322 2
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
..++|++|+|.++ ..|++||+.++.. .+ +++..+.++..++.+.++..+ .+||||||||++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~ 147 (214)
T TIGR02673 79 RRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVA 147 (214)
T ss_pred hheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHH
Confidence 3599999999987 5799999987521 22 234556667777765444433 489999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCE
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 816 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 816 (1623)
||||++.+|+++||||||++||+.+..++.+.+.....+|+|+|++||+++++.. ||++++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999988665543458999999999999875 89999999984
No 475
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=335.91 Aligned_cols=200 Identities=24% Similarity=0.384 Sum_probs=165.3
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------cC
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------RG 679 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------~~ 679 (1623)
++++|++++|++ +++|+|+||+|++|++++|+||||||||||+++|+|.++|++|. +.+ +.
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~-i~~~g~~i~~~~~~~~~~~~ 77 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGA-VLWQGKPLDYSKRGLLALRQ 77 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccE-EEECCEEcccccCCHHHHHh
Confidence 789999999963 57999999999999999999999999999999999999999984 322 13
Q ss_pred cEEEEccCcc--cCcccHHHHHhcCC---CCCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVSW--IFNATVRDNILFGS---AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~~--l~~~Tv~enI~~g~---~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.|+|++|++. ++..|+.+|+.++. ..+.+ +..++++..++.+..+ ....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~ 146 (271)
T PRK13638 78 QVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVA 146 (271)
T ss_pred heEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHH
Confidence 5999999986 46779999998741 12222 2344555566643322 234689999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
|||||+.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|+++++...
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999998866554445899999999999985 5899999999999999999887654
No 476
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-34 Score=310.88 Aligned_cols=210 Identities=26% Similarity=0.455 Sum_probs=173.2
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------- 678 (1623)
+.++++|++..|.. ..+|++|||++++||+++|+|+||+||||||++|+|..++.+| .+...
T Consensus 2 ~mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G-~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 2 PMLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSG-RIIFDGEDITGLPPHERAR 77 (237)
T ss_pred CceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCe-eEEECCeecCCCCHHHHHh
Confidence 35899999999974 5799999999999999999999999999999999999999988 44432
Q ss_pred CcEEEEccCcccC-cccHHHHHhcCCCCCHH-HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHh
Q 000351 679 GTVAYVPQVSWIF-NATVRDNILFGSAFEPA-RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 756 (1623)
Q Consensus 679 ~~iay~~Q~~~l~-~~Tv~enI~~g~~~~~~-~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~ 756 (1623)
..|+||||.-.+| +.||+||+..|...... ...+ ..+++-.+.+|.- ......++.+|||||||-+|+||||.
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP~L-ker~~~~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFPRL-KERRNQRAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHChhH-HHHhcCcccCCChHHHHHHHHHHHHh
Confidence 3599999999998 78999999987432211 1111 1133445555542 22456788999999999999999999
Q ss_pred cCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchh-hhcCEEEEEeCCEEEEecChhHHhhcCh
Q 000351 757 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFL-SQVDRIILVHEGMVKEEGTFEDLSNNGE 831 (1623)
Q Consensus 757 ~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 831 (1623)
++|++++|||||.+|-|...+.||+.+.....+ |.||++|-++..+. +.+||.++|++|+|+.+|+.++|.++..
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 999999999999999999999999866554433 67999999999984 5789999999999999999999987644
No 477
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=333.33 Aligned_cols=201 Identities=21% Similarity=0.387 Sum_probs=164.7
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------- 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------- 678 (1623)
..++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|. +.+.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~ 79 (255)
T PRK11300 4 PLLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGT-ILLRGQHIEGLPGHQIAR 79 (255)
T ss_pred ceEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcce-EEECCEECCCCCHHHHHh
Confidence 3699999999996 357999999999999999999999999999999999999999993 3322
Q ss_pred CcEEEEccCcccCc-ccHHHHHhcCCC-----------C-----C---H---HHHHHHHHHhCchhHHhcCCCCCccccc
Q 000351 679 GTVAYVPQVSWIFN-ATVRDNILFGSA-----------F-----E---P---ARYEKAIDVTSLQHDLDLLPGGDVTEIG 735 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~-~Tv~enI~~g~~-----------~-----~---~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig 735 (1623)
..++|++|++.++. .|++||+.++.. + + . ++..+.++..++.+ ...
T Consensus 80 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~ 148 (255)
T PRK11300 80 MGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HAN 148 (255)
T ss_pred cCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhh
Confidence 24899999999985 599999987521 0 0 0 12222333333332 234
Q ss_pred CCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcC-CcEEEEEcCCcchhhh-cCEEEEEe
Q 000351 736 ERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVH 813 (1623)
Q Consensus 736 ~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~d~i~~l~ 813 (1623)
....+||||||||++||||++.+|+++||||||++||+.+.+.+.+.+.....+ |+|+|++||+++++.. ||++++|+
T Consensus 149 ~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~ 228 (255)
T PRK11300 149 RQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVN 228 (255)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 556789999999999999999999999999999999999999998866554333 8999999999999864 89999999
Q ss_pred CCEEEEecChhHHhh
Q 000351 814 EGMVKEEGTFEDLSN 828 (1623)
Q Consensus 814 ~G~i~~~g~~~~l~~ 828 (1623)
+|++++.|+.+++.+
T Consensus 229 ~g~i~~~~~~~~~~~ 243 (255)
T PRK11300 229 QGTPLANGTPEEIRN 243 (255)
T ss_pred CCeEEecCCHHHHhh
Confidence 999999999888754
No 478
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=334.52 Aligned_cols=204 Identities=26% Similarity=0.377 Sum_probs=168.1
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------C
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------G 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~ 679 (1623)
+.++++|+++.|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+. .
T Consensus 6 ~~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~ 83 (269)
T PRK13648 6 SIIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSG-EIFYNNQAITDDNFEKLRK 83 (269)
T ss_pred ceEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCce-EEEECCEECCcCCHHHHHh
Confidence 469999999999742 34699999999999999999999999999999999999999998 44332 2
Q ss_pred cEEEEccCcc--cCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~~--l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.++|++|+|+ +++.|+++|+.++.. ... ++..++++..++.+..+ ....+||||||||++
T Consensus 84 ~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 152 (269)
T PRK13648 84 HIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVA 152 (269)
T ss_pred heeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHH
Confidence 5899999995 457799999987632 222 23334455555543332 344689999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 153 IAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999886654333 38999999999999888999999999999999999988654
No 479
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=333.38 Aligned_cols=205 Identities=25% Similarity=0.348 Sum_probs=167.6
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCC---ccC--CCCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGE---LPP--VSDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~---~~~--~~g~~~~~---------- 677 (1623)
+.++++|+++.|+. +++|+|+||+|++|++++|+|+||||||||+++|+|. .+| ++| .+.+
T Consensus 2 ~~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G-~i~~~g~~~~~~~~ 77 (250)
T PRK14245 2 VKIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEG-EIRIDGRNIYDKGV 77 (250)
T ss_pred cEEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCce-EEEECCEecccccc
Confidence 46899999999963 5699999999999999999999999999999999996 454 367 3221
Q ss_pred -----cCcEEEEccCcccCcccHHHHHhcCCC----CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 -----RGTVAYVPQVSWIFNATVRDNILFGSA----FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~~~Tv~enI~~g~~----~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
++.|+|++|++.+++.|++||+.++.. .+ +++..++++.+++.+.+. +.....+.+||||
T Consensus 78 ~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 150 (250)
T PRK14245 78 QVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGG 150 (250)
T ss_pred cHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHH
Confidence 235999999999988899999986521 11 123455566666644332 1234566789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
||||++||||++.+|+++||||||++||+.+.+++.+.+... .+++|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 151 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~ 229 (250)
T PRK14245 151 QQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHEL-KKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDT 229 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999998866543 46899999999999875 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.++
T Consensus 230 ~~~~~~ 235 (250)
T PRK14245 230 KKIFTN 235 (250)
T ss_pred HHHhcC
Confidence 998653
No 480
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-34 Score=329.11 Aligned_cols=198 Identities=28% Similarity=0.493 Sum_probs=161.9
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------cCc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------RGT 680 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~~~ 680 (1623)
++++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|. +.+ +..
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 76 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGS-IRLDGEDITKLPPHERARAG 76 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCE-EEECCEECCCCCHHHHHHhC
Confidence 468999999963 57999999999999999999999999999999999999999983 332 235
Q ss_pred EEEEccCcccCc-ccHHHHHhcCCC-C--C-HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 681 VAYVPQVSWIFN-ATVRDNILFGSA-F--E-PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 681 iay~~Q~~~l~~-~Tv~enI~~g~~-~--~-~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
++|++|++.++. .|++||+.++.. . + .+...++++..+. + .........+||||||||++||||+
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~---l-------~~~~~~~~~~LS~G~~qrv~la~al 146 (230)
T TIGR03410 77 IAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV---L-------KEMLGRRGGDLSGGQQQQLAIARAL 146 (230)
T ss_pred eEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh---H-------HHHhhCChhhCCHHHHHHHHHHHHH
Confidence 999999999886 599999987532 1 1 1223333333321 1 1123345568999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChhHH
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 826 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 826 (1623)
+.+|+++||||||++||+.+.+++.+.+..... .|+|+|++||+++++.. ||+|+++++|++++.|+.+++
T Consensus 147 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 147 VTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 999999999999999999999999886655433 38999999999999875 899999999999999998886
No 481
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=332.18 Aligned_cols=208 Identities=22% Similarity=0.285 Sum_probs=170.0
Q ss_pred cEEEEEEEEEeCCC------------------CCCcccceeeEeCCCCEEEEecCCCCChhhHHHHhhccccCCCcEEEE
Q 000351 1238 SIKFEDVVLRYRPE------------------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILI 1299 (1623)
Q Consensus 1238 ~I~~~nVs~~Y~~~------------------~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~I 1299 (1623)
.|+++||++.|+.. .+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 47888888877541 235899999999999999999999999999999999999999999999
Q ss_pred CCEecCCCChHHhhhceEEEcCCCcccc-ccHHhhcCCC---CCCCHHHHHHHHHHhcHHHHHHhccCCcchhhhcCCCC
Q 000351 1300 DGFDIAKFGLMDLRKILGIIPQSPVLFS-GTVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1375 (1623)
Q Consensus 1300 dG~di~~i~~~~lR~~i~~vpQdp~Lf~-gTIr~NLd~~---~~~sd~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~G~~ 1375 (1623)
||. +++++|++.+++ .|+++|+... ...+.++..+..+ +.++. .+++..+......
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~l~~--~~l~~~~~~~~~~ 143 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTP-----KIIEF--SELGEFIYQPVKK 143 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHH--cCCchhhcCCccc
Confidence 984 456788887664 4999998631 1233444332211 11111 2444555556678
Q ss_pred CChhHHHHHHHHHhhhcCCcEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhc-cCEEEEEeCceEee
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 1453 (1623)
Q Consensus 1376 LSgGQrQrLaLARALL~~p~ILlLDEpTS~LD~~Te~~Iq~~L~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1453 (1623)
||||||||++||||++++|+||||||||++||+.+.+.+.+.|.+.. .++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 144 LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~ 223 (264)
T PRK13546 144 YSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKD 223 (264)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998764 47899999999999876 99999999999999
Q ss_pred ecChhHHhhcCC
Q 000351 1454 YDTPEELLSNEG 1465 (1623)
Q Consensus 1454 ~Gtp~eLl~~~~ 1465 (1623)
.|++++++++..
T Consensus 224 ~g~~~~~~~~~~ 235 (264)
T PRK13546 224 YGELDDVLPKYE 235 (264)
T ss_pred eCCHHHHHHHhH
Confidence 999999987543
No 482
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=332.70 Aligned_cols=200 Identities=27% Similarity=0.441 Sum_probs=167.0
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.++++|++++|++ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++| .+.+. ..
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G-~i~~~g~~~~~~~~~~~~~~ 77 (255)
T PRK11231 2 TLRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSG-TVFLGDKPISMLSSRQLARR 77 (255)
T ss_pred EEEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCc-EEEECCEEhHHCCHHHHhhh
Confidence 4789999999963 5799999999999999999999999999999999999999998 44332 24
Q ss_pred EEEEccCcccCc-ccHHHHHhcCCC-----C------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHH
Q 000351 681 VAYVPQVSWIFN-ATVRDNILFGSA-----F------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 748 (1623)
Q Consensus 681 iay~~Q~~~l~~-~Tv~enI~~g~~-----~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqR 748 (1623)
++|++|++.++. .|+.||+.++.. + +.++..++++..++.+..+. ....||||||||
T Consensus 78 i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr 146 (255)
T PRK11231 78 LALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQR 146 (255)
T ss_pred eEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHH
Confidence 999999998875 499999987521 1 12344555666666544333 346899999999
Q ss_pred HHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHh
Q 000351 749 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 827 (1623)
Q Consensus 749 vaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 827 (1623)
++||||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||++++|++|+++..|+++++.
T Consensus 147 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 147 AFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 99999999999999999999999999999998866544345899999999999876 58999999999999999998876
Q ss_pred h
Q 000351 828 N 828 (1623)
Q Consensus 828 ~ 828 (1623)
.
T Consensus 227 ~ 227 (255)
T PRK11231 227 T 227 (255)
T ss_pred C
Confidence 4
No 483
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=329.95 Aligned_cols=199 Identities=28% Similarity=0.434 Sum_probs=163.6
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 677 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------- 677 (1623)
.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|..+|++|. +.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~ 77 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGT-LNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceE-EEECCEecccccccchhhH
Confidence 4789999999963 57999999999999999999999999999999999999999983 332
Q ss_pred ---cCcEEEEccCcccCc-ccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 ---RGTVAYVPQVSWIFN-ATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 ---~~~iay~~Q~~~l~~-~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..|+|++|++.++. .|++|||.++. .... ++..+.++..++...++ ....+|||||
T Consensus 78 ~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~ 146 (242)
T PRK11124 78 RELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYAD-----------RFPLHLSGGQ 146 (242)
T ss_pred HHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHH
Confidence 235999999999875 69999997421 1111 22344455555543333 3345899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEecChh
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 824 (1623)
|||++||||++.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+.+++.. ||++++|++|+++++|+++
T Consensus 147 ~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~ 226 (242)
T PRK11124 147 QQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999988654433358999999999999864 8999999999999999988
Q ss_pred HHh
Q 000351 825 DLS 827 (1623)
Q Consensus 825 ~l~ 827 (1623)
++.
T Consensus 227 ~~~ 229 (242)
T PRK11124 227 CFT 229 (242)
T ss_pred Hhc
Confidence 764
No 484
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=333.54 Aligned_cols=205 Identities=26% Similarity=0.385 Sum_probs=166.5
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc--C---CCCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP--P---VSDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~--~---~~g~~~~~---------- 677 (1623)
+.++++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++| .+.+
T Consensus 11 ~~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G-~i~~~g~~~~~~~~ 86 (259)
T PRK14274 11 EVYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTG-EMNYNGSNILKGKV 86 (259)
T ss_pred ceEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCce-EEEECCEEcccccc
Confidence 46999999999963 579999999999999999999999999999999999987 3 467 3221
Q ss_pred -----cCcEEEEccCcccCcccHHHHHhcCCC----CCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 -----RGTVAYVPQVSWIFNATVRDNILFGSA----FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~~~Tv~enI~~g~~----~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
+..+||++|++.+++.|++||+.++.. .+++ +..++++..++.+.+. +.....+.+||||
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~G 159 (259)
T PRK14274 87 DLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGG 159 (259)
T ss_pred CHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHH
Confidence 235999999999988899999987532 1222 2333445555543221 1234566789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
||||++||||++.+|+++||||||++||+++...+.+.+.. ..+++|+|+|||+++.+. .||+|++|++|+++++|++
T Consensus 160 q~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 238 (259)
T PRK14274 160 QQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDT 238 (259)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999875544 445799999999999876 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.++
T Consensus 239 ~~~~~~ 244 (259)
T PRK14274 239 NKMFSN 244 (259)
T ss_pred HHHhhC
Confidence 988643
No 485
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.1e-34 Score=327.26 Aligned_cols=198 Identities=25% Similarity=0.375 Sum_probs=162.5
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------C
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------G 679 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~ 679 (1623)
+.|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++| .+.+. .
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G-~i~~~g~~~~~~~~~~~~~ 81 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSG-TLLFEGEDISTLKPEIYRQ 81 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCC-eEEECCEEcCcCCHHHHHh
Confidence 4699999999996 35799999999999999999999999999999999999999999 43322 3
Q ss_pred cEEEEccCcccCcccHHHHHhcCCC-----CCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHH
Q 000351 680 TVAYVPQVSWIFNATVRDNILFGSA-----FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 754 (1623)
Q Consensus 680 ~iay~~Q~~~l~~~Tv~enI~~g~~-----~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARa 754 (1623)
.++|++|++.+++.|++||+.++.. .++++..+.++..++.+ +.......+|||||||||+||||
T Consensus 82 ~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~lara 151 (225)
T PRK10247 82 QVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRN 151 (225)
T ss_pred ccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHH
Confidence 5999999999998899999986421 12233445555555532 12344567899999999999999
Q ss_pred HhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhhcCEEEEEe-CCEEEEecChh
Q 000351 755 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVH-EGMVKEEGTFE 824 (1623)
Q Consensus 755 l~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~d~i~~l~-~G~i~~~g~~~ 824 (1623)
++++|+++||||||++||+.+.+.+.+.+..... +|+|+|++||+++++..||++++|+ ++..+++|+|+
T Consensus 152 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 152 LQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999876554333 4899999999999998899999995 56667778764
No 486
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-34 Score=330.37 Aligned_cols=199 Identities=20% Similarity=0.358 Sum_probs=164.3
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc--------------C
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR--------------G 679 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~--------------~ 679 (1623)
.++++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|. +.+. .
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~-i~~~g~~~~~~~~~~~~~~ 77 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGS-VLFGGTDLTGLPEHQIARA 77 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCe-EEECCeecCCCCHHHHHhc
Confidence 4889999999963 57999999999999999999999999999999999999999983 3321 2
Q ss_pred cEEEEccCcccCc-ccHHHHHhcCCCC---------------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccCh
Q 000351 680 TVAYVPQVSWIFN-ATVRDNILFGSAF---------------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 743 (1623)
Q Consensus 680 ~iay~~Q~~~l~~-~Tv~enI~~g~~~---------------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 743 (1623)
.++|++|++.++. .|++||+.++... ++++..+.++..++.+ .......+|||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 146 (242)
T TIGR03411 78 GIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLAD-----------EADRLAGLLSH 146 (242)
T ss_pred CeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCH
Confidence 4999999999886 5999999875321 1122333444444432 23345568999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecC
Q 000351 744 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 744 GQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~ 822 (1623)
|||||++||||++.+|+++||||||++||+.+.+.+.+.+.. ..+++|+|++||+++++. .||+|++|++|+++++|+
T Consensus 147 Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~ 225 (242)
T TIGR03411 147 GQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGS 225 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCC
Confidence 999999999999999999999999999999999999885544 345799999999999987 489999999999999999
Q ss_pred hhHHhh
Q 000351 823 FEDLSN 828 (1623)
Q Consensus 823 ~~~l~~ 828 (1623)
++++..
T Consensus 226 ~~~~~~ 231 (242)
T TIGR03411 226 LDQVQA 231 (242)
T ss_pred HHHHhc
Confidence 988764
No 487
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-34 Score=323.74 Aligned_cols=190 Identities=27% Similarity=0.472 Sum_probs=158.6
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-----------CcEEE
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-----------GTVAY 683 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-----------~~iay 683 (1623)
|+++|++++|++ +. .|+||+|++|++++|+||||||||||+++|+|+++|++| .+.+. ..++|
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G-~i~~~g~~~~~~~~~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSG-RVLINGVDVTAAPPADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCc-eEEECCEEcCcCCHhHccEEE
Confidence 478999999963 22 399999999999999999999999999999999999998 44332 25999
Q ss_pred EccCcccCc-ccHHHHHhcCCC--C-----CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHH
Q 000351 684 VPQVSWIFN-ATVRDNILFGSA--F-----EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 755 (1623)
Q Consensus 684 ~~Q~~~l~~-~Tv~enI~~g~~--~-----~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal 755 (1623)
++|++.++. .|++||+.++.. . ++++..++++.+++.+..+..+ .+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999885 599999987532 1 1335566777777766555544 47999999999999999
Q ss_pred hcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhhh-cCEEEEEeCCEEEEec
Q 000351 756 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 821 (1623)
Q Consensus 756 ~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~d~i~~l~~G~i~~~g 821 (1623)
+.+|+++||||||++||+++.+.+.+.+..... +|+|+|++||+++++.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999886654333 48999999999999865 8999999999998654
No 488
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=331.13 Aligned_cols=200 Identities=30% Similarity=0.431 Sum_probs=167.1
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------Cc
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GT 680 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ 680 (1623)
.++++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++| .+.+. ..
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G-~i~~~g~~~~~~~~~~~~~~ 77 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSG-EVRLNGRPLADWSPAELARR 77 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC-EEEECCEEcccCCHHHhhhh
Confidence 4789999999963 5799999999999999999999999999999999999999998 43322 35
Q ss_pred EEEEccCccc-CcccHHHHHhcCCC-C------CHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHH
Q 000351 681 VAYVPQVSWI-FNATVRDNILFGSA-F------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 752 (1623)
Q Consensus 681 iay~~Q~~~l-~~~Tv~enI~~g~~-~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLA 752 (1623)
++|++|++.+ ++.|++||+.++.. . .+++..+.++..++.+..+. ...+||||||||++||
T Consensus 78 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgGe~qrv~la 146 (258)
T PRK13548 78 RAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGR-----------DYPQLSGGEQQRVQLA 146 (258)
T ss_pred eEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHH
Confidence 8999999987 57899999987532 1 12334556666666543333 3468999999999999
Q ss_pred HHHh------cCCCEEEEeCcccCcCHHHHHHHHHHHHhhh-cCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChh
Q 000351 753 RAVY------SNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 753 Ral~------~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 824 (1623)
||++ .+|+++||||||++||+.+.+.+.+.+.... .+|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 147 ~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 147 RVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 9999 5999999999999999999999987665443 35899999999999886 58999999999999999998
Q ss_pred HHhh
Q 000351 825 DLSN 828 (1623)
Q Consensus 825 ~l~~ 828 (1623)
++..
T Consensus 227 ~~~~ 230 (258)
T PRK13548 227 EVLT 230 (258)
T ss_pred HHhC
Confidence 8764
No 489
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=334.06 Aligned_cols=206 Identities=23% Similarity=0.360 Sum_probs=167.4
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc-----CCCCCeEEE---------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAVI--------- 677 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~-----~~~g~~~~~--------- 677 (1623)
...++++|+++.|+. +++|+|+||+|++|++++|+||||||||||+++|+|.++ |++|. +.+
T Consensus 11 ~~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~-v~~~g~~i~~~~ 86 (269)
T PRK14259 11 NIIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGR-VLFDGTDLYDPR 86 (269)
T ss_pred CceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceE-EEECCEEccccc
Confidence 357999999999963 569999999999999999999999999999999999987 57773 322
Q ss_pred ------cCcEEEEccCcccCcccHHHHHhcCCC---CC---HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHH
Q 000351 678 ------RGTVAYVPQVSWIFNATVRDNILFGSA---FE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 745 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~~Tv~enI~~g~~---~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQ 745 (1623)
+..|+|++|++.++..|++||+.++.. ++ +++..++++.+++...++ +.......+|||||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 135999999999987899999987642 11 233344555555432221 12345567899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeC----------
Q 000351 746 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHE---------- 814 (1623)
Q Consensus 746 kqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~---------- 814 (1623)
|||++||||++.+|+++||||||++||+.+.+++.+.+.. ..+++|+|++||+++++. .||++++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~ 238 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGK 238 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccc
Confidence 9999999999999999999999999999999999875543 445789999999999875 5899999996
Q ss_pred -CEEEEecChhHHhhc
Q 000351 815 -GMVKEEGTFEDLSNN 829 (1623)
Q Consensus 815 -G~i~~~g~~~~l~~~ 829 (1623)
|++++.|+.+++.+.
T Consensus 239 ~g~~~~~~~~~~~~~~ 254 (269)
T PRK14259 239 VGYLVEFNETKKIFNS 254 (269)
T ss_pred cceEEEeCCHHHHHhC
Confidence 678999999988653
No 490
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=334.04 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=167.8
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccC-----CCCCeEEE---------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAVI--------- 677 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~-----~~g~~~~~--------- 677 (1623)
.+.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|. +.+
T Consensus 10 ~~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~-i~~~g~~i~~~~ 85 (258)
T PRK14268 10 QPQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGK-VSIEGEDIYEPD 85 (258)
T ss_pred ceeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceE-EEECCEEccccc
Confidence 35699999999996 35799999999999999999999999999999999999875 6773 221
Q ss_pred ------cCcEEEEccCcccCcccHHHHHhcCC---CCCHH----HHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 ------RGTVAYVPQVSWIFNATVRDNILFGS---AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~~Tv~enI~~g~---~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
+..++|++|++.+++.|++||+.++. ..+.+ +..++++.+++..++. ........+||||
T Consensus 86 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 158 (258)
T PRK14268 86 VDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSGG 158 (258)
T ss_pred chHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCHH
Confidence 23599999999998899999998752 12222 2344555555532221 1234556789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
||||++||||++.+|+++||||||++||+.+.+++.+.+.. ..+++|+|++||+++++. .||+|++|++|++++.|++
T Consensus 159 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 237 (258)
T PRK14268 159 QQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQT 237 (258)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999875544 345799999999999885 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++..+
T Consensus 238 ~~~~~~ 243 (258)
T PRK14268 238 RQIFHN 243 (258)
T ss_pred HHHhcC
Confidence 988643
No 491
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.7e-34 Score=325.91 Aligned_cols=189 Identities=26% Similarity=0.432 Sum_probs=157.0
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE----------------c
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------------R 678 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----------------~ 678 (1623)
++++|+++.|+. .+++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+ +
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~i~~~~~~~~~~~~ 77 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGT-IRVNGQDVSDLRGRAIPYLR 77 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceE-EEECCEEcccCCHHHHHHHH
Confidence 468999999963 257999999999999999999999999999999999999999983 322 1
Q ss_pred CcEEEEccCcccCc-ccHHHHHhcCCC---CC----HHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 679 GTVAYVPQVSWIFN-ATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~-~Tv~enI~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
..++|++|++.++. .|++||+.++.. .+ +++..+.++.+++.+.++..+ .+||||||||++
T Consensus 78 ~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ 146 (214)
T cd03292 78 RKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVA 146 (214)
T ss_pred HheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHH
Confidence 25999999998875 699999987521 12 134455666677765444333 489999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCEE
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 817 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~i 817 (1623)
||||++.+|+++||||||++||+++.+.+.+.+.....+|+|+|++||+.+.+.. ||+|++|++|++
T Consensus 147 laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 147 IARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988665543458999999999999875 899999999974
No 492
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=332.23 Aligned_cols=205 Identities=22% Similarity=0.386 Sum_probs=165.7
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCc--cC---CCCCeEEE----------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL--PP---VSDASAVI---------- 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~--~~---~~g~~~~~---------- 677 (1623)
+.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|.. +| ++|. +.+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~-i~~~g~~~~~~~~ 79 (252)
T PRK14239 4 PILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGS-IVYNGHNIYSPRT 79 (252)
T ss_pred ceEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccce-EEECCEECcCccc
Confidence 36899999999963 57999999999999999999999999999999999985 36 3673 222
Q ss_pred -----cCcEEEEccCcccCcccHHHHHhcCCC---C-CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChH
Q 000351 678 -----RGTVAYVPQVSWIFNATVRDNILFGSA---F-EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 678 -----~~~iay~~Q~~~l~~~Tv~enI~~g~~---~-~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGG 744 (1623)
+..++|++|++.+++.|++||+.++.. . ++ ++...+++.+++.+.+. +..+....+||||
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 152 (252)
T PRK14239 80 DTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGG 152 (252)
T ss_pred chHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHH
Confidence 235999999999999999999986521 1 11 22333455555433222 1234566789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecCh
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTF 823 (1623)
Q Consensus 745 QkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 823 (1623)
||||++||||++.+|+++||||||++||+.+.+++++.+.. ..+++|+|++||+++.+. .||+|++|++|++++.|+.
T Consensus 153 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 231 (252)
T PRK14239 153 QQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDT 231 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999875544 345789999999999875 5899999999999999999
Q ss_pred hHHhhc
Q 000351 824 EDLSNN 829 (1623)
Q Consensus 824 ~~l~~~ 829 (1623)
+++.+.
T Consensus 232 ~~~~~~ 237 (252)
T PRK14239 232 KQMFMN 237 (252)
T ss_pred HHHHhC
Confidence 988654
No 493
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=335.64 Aligned_cols=201 Identities=26% Similarity=0.441 Sum_probs=167.0
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE---------------cC
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------RG 679 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~---------------~~ 679 (1623)
++++|+++.|+. .+++++|+||+|++||+++|+||||||||||+++|+|.++|++|. +.+ +.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~-i~~~g~~~~~~~~~~~~~~~ 78 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGE-VLIKGEPIKYDKKSLLEVRK 78 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccE-EEECCEECccccchHHHHHh
Confidence 789999999963 356999999999999999999999999999999999999999883 322 23
Q ss_pred cEEEEccCc--ccCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~--~l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.|+|++|+| .+++.|++|||.++.. ... ++..++++.+++.+..+. ...+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LS~Gq~qrv~ 147 (275)
T PRK13639 79 TVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENK-----------PPHHLSGGQKKRVA 147 (275)
T ss_pred heEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcC-----------ChhhCCHHHHHHHH
Confidence 599999997 5678899999987531 221 234455666666433222 34589999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 829 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 829 (1623)
||||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++. .||+|++|++|++++.|+++++...
T Consensus 148 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 148 IAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999998866544335899999999999986 5999999999999999999988654
No 494
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=329.10 Aligned_cols=200 Identities=22% Similarity=0.386 Sum_probs=164.2
Q ss_pred cEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------cC
Q 000351 614 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------RG 679 (1623)
Q Consensus 614 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~~ 679 (1623)
.++++|+++.|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|. +.+ +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~ 78 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGN-IIIDDEDISLLPLHARARR 78 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcE-EEECCEECCCCCHHHHHHh
Confidence 5889999999963 57999999999999999999999999999999999999999983 332 23
Q ss_pred cEEEEccCcccCc-ccHHHHHhcCCC----CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHH
Q 000351 680 TVAYVPQVSWIFN-ATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 750 (1623)
Q Consensus 680 ~iay~~Q~~~l~~-~Tv~enI~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRva 750 (1623)
.++|++|++.++. .|++||+.++.. .+. .+..+.++..++.+ .......+||||||||++
T Consensus 79 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~ 147 (241)
T PRK10895 79 GIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-----------LRDSMGQSLSGGERRRVE 147 (241)
T ss_pred CeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-----------HhhcchhhCCHHHHHHHH
Confidence 5999999998875 699999987532 122 12333344444332 234455789999999999
Q ss_pred HHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 751 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 751 LARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
||||++.+|+++||||||++||+.+.+++.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 148 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 148 IARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999999998755443345899999999998775 589999999999999999988764
No 495
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.8e-34 Score=332.19 Aligned_cols=200 Identities=26% Similarity=0.390 Sum_probs=165.8
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE-----------------
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------------- 677 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~----------------- 677 (1623)
|+++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|.++|++|. +.+
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~i~~~~~~~~~~~~ 76 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQ-IQVEGEQLYHMPGRNGPLVP 76 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceE-EEECCEEccccccccccccc
Confidence 478999999963 57999999999999999999999999999999999999999883 221
Q ss_pred ---------cCcEEEEccCcccC-cccHHHHHhcCC----CCCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCC
Q 000351 678 ---------RGTVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 739 (1623)
Q Consensus 678 ---------~~~iay~~Q~~~l~-~~Tv~enI~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~ 739 (1623)
+..++|++|++.++ ..|++||+.++. ..+. ++..+.++..++.+.++ ....
T Consensus 77 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~ 145 (252)
T TIGR03005 77 ADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKAD-----------HMPA 145 (252)
T ss_pred cchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhh-----------cChh
Confidence 23599999999887 589999998742 1121 23445555555544333 3446
Q ss_pred ccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEeCCEE
Q 000351 740 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMV 817 (1623)
Q Consensus 740 ~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~~G~i 817 (1623)
+||||||||++||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++.+. .||++++|++|++
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 225 (252)
T TIGR03005 146 QLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRI 225 (252)
T ss_pred hcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999876654433 3899999999999985 5899999999999
Q ss_pred EEecChhHHhhc
Q 000351 818 KEEGTFEDLSNN 829 (1623)
Q Consensus 818 ~~~g~~~~l~~~ 829 (1623)
++.|+++++.+.
T Consensus 226 ~~~g~~~~~~~~ 237 (252)
T TIGR03005 226 VEQGKPDEIFRQ 237 (252)
T ss_pred EEeCCHHHHhcC
Confidence 999999888644
No 496
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=333.26 Aligned_cols=206 Identities=20% Similarity=0.322 Sum_probs=170.4
Q ss_pred CCcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCcc-----CCCCCeEEE---------
Q 000351 612 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAVI--------- 677 (1623)
Q Consensus 612 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~-----~~~g~~~~~--------- 677 (1623)
...++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|. +.+
T Consensus 18 ~~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~-i~~~g~~~~~~~ 93 (267)
T PRK14237 18 EIALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ-ILYRGIDINRKE 93 (267)
T ss_pred CeEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE-EEECCEEccccc
Confidence 35799999999995 3679999999999999999999999999999999999986 46773 321
Q ss_pred ------cCcEEEEccCcccCcccHHHHHhcCCC---C-CH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccCh
Q 000351 678 ------RGTVAYVPQVSWIFNATVRDNILFGSA---F-EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 743 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~~Tv~enI~~g~~---~-~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSG 743 (1623)
+..|+|++|++.++..|++|||.++.. . ++ ++..++++.+++.+++. +..+..+.+|||
T Consensus 94 ~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~ 166 (267)
T PRK14237 94 INVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSG 166 (267)
T ss_pred CChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCH
Confidence 235999999999988899999987521 1 21 33445566666654332 234566789999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecC
Q 000351 744 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGT 822 (1623)
Q Consensus 744 GQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~ 822 (1623)
|||||++||||++.+|+++||||||++||+.+.+++.+.+.. ..+++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 167 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~ 245 (267)
T PRK14237 167 GQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDK 245 (267)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999876554 345799999999999875 589999999999999999
Q ss_pred hhHHhhc
Q 000351 823 FEDLSNN 829 (1623)
Q Consensus 823 ~~~l~~~ 829 (1623)
.+++...
T Consensus 246 ~~~~~~~ 252 (267)
T PRK14237 246 TRNIFTN 252 (267)
T ss_pred HHHHhcC
Confidence 9988643
No 497
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-34 Score=325.36 Aligned_cols=188 Identities=32% Similarity=0.536 Sum_probs=154.3
Q ss_pred EEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEc-------------CcEE
Q 000351 616 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR-------------GTVA 682 (1623)
Q Consensus 616 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~-------------~~ia 682 (1623)
+++|+++.|++. .+++|+|+||++++|++++|+||||||||||+++|+|.++|++|. +.+. ..|+
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~-i~~~g~~~~~~~~~~~~~~i~ 78 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGE-VLVDGKDLTKLSLKELRRKVG 78 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCce-EEECCEEcccCCHHHHHhhce
Confidence 368999999632 257999999999999999999999999999999999999999984 3322 3589
Q ss_pred EEccCcc--cCcccHHHHHhcCCC---CCH----HHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHH
Q 000351 683 YVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 753 (1623)
Q Consensus 683 y~~Q~~~--l~~~Tv~enI~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLAR 753 (1623)
|++|++. +++.|++||+.++.. .+. ++..+.++..++.+.++. ...+|||||||||+|||
T Consensus 79 ~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~lar 147 (211)
T cd03225 79 LVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDR-----------SPFTLSGGQKQRVAIAG 147 (211)
T ss_pred EEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHHHH
Confidence 9999984 568899999987521 222 234455666666544433 34689999999999999
Q ss_pred HHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhh-cCEEEEEeCCE
Q 000351 754 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 816 (1623)
Q Consensus 754 al~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~d~i~~l~~G~ 816 (1623)
|++.+|+++||||||++||+.+.+++++.+.....+|+|+|++||+++++.. ||+|++|++|+
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 148 VLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999998665544458999999999999876 89999999884
No 498
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=327.36 Aligned_cols=201 Identities=26% Similarity=0.386 Sum_probs=163.4
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEE--------------c
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------------R 678 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~--------------~ 678 (1623)
..++++|+++.|++ +++|+|+||+|++||+++|+||||||||||+++|+|.++|++|. +.+ +
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~-i~~~g~~~~~~~~~~~~~ 79 (237)
T PRK11614 4 VMLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGR-IVFDGKDITDWQTAKIMR 79 (237)
T ss_pred cEEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCce-EEECCEecCCCCHHHHHH
Confidence 35899999999963 57999999999999999999999999999999999999999984 322 2
Q ss_pred CcEEEEccCcccCc-ccHHHHHhcCCC-CCHHHH----HHHHHHh-CchhHHhcCCCCCcccccCCCCccChHHHHHHHH
Q 000351 679 GTVAYVPQVSWIFN-ATVRDNILFGSA-FEPARY----EKAIDVT-SLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 751 (1623)
Q Consensus 679 ~~iay~~Q~~~l~~-~Tv~enI~~g~~-~~~~~~----~~~~~~~-~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaL 751 (1623)
..++|++|++.++. .||+||+.++.. .+.+.. .++++.. ++.+ .......+||||||||++|
T Consensus 80 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~l 148 (237)
T PRK11614 80 EAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAI 148 (237)
T ss_pred hCEEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHH
Confidence 35999999998886 699999987532 122222 2222222 1111 1223456899999999999
Q ss_pred HHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhcCCcEEEEEcCCcchhh-hcCEEEEEeCCEEEEecChhHHhh
Q 000351 752 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 828 (1623)
Q Consensus 752 ARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 828 (1623)
|||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++. .||++++|++|++++.|+++++..
T Consensus 149 a~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 149 GRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999998866554445899999999999765 589999999999999999998864
No 499
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=332.06 Aligned_cols=199 Identities=27% Similarity=0.445 Sum_probs=163.8
Q ss_pred CcEEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCC---CCeEEE------------
Q 000351 613 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS---DASAVI------------ 677 (1623)
Q Consensus 613 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~---g~~~~~------------ 677 (1623)
+.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|+. | .+.+
T Consensus 3 ~~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G-~i~~~g~~~~~~~~~~ 78 (262)
T PRK09984 3 TIIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGS-HIELLGRTVQREGRLA 78 (262)
T ss_pred cEEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCce-EEEECCEecccccccc
Confidence 3689999999996 3579999999999999999999999999999999999998864 5 3221
Q ss_pred ------cCcEEEEccCcccCc-ccHHHHHhcCCC------------CC---HHHHHHHHHHhCchhHHhcCCCCCccccc
Q 000351 678 ------RGTVAYVPQVSWIFN-ATVRDNILFGSA------------FE---PARYEKAIDVTSLQHDLDLLPGGDVTEIG 735 (1623)
Q Consensus 678 ------~~~iay~~Q~~~l~~-~Tv~enI~~g~~------------~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig 735 (1623)
+..++|++|++.++. .|++||+.++.. .. .++..++++..++.+.++
T Consensus 79 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~----------- 147 (262)
T PRK09984 79 RDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAH----------- 147 (262)
T ss_pred hhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHh-----------
Confidence 125899999998875 699999987531 01 123445555555543333
Q ss_pred CCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcCHHHHHHHHHHHHhhhc-CCcEEEEEcCCcchhh-hcCEEEEEe
Q 000351 736 ERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVH 813 (1623)
Q Consensus 736 ~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~d~i~~l~ 813 (1623)
....+||||||||++||||++.+|+++||||||++||+++.+.+.+.+..... +|+|+|++||+++.+. .||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~ 227 (262)
T PRK09984 148 QRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALR 227 (262)
T ss_pred CCccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 34468999999999999999999999999999999999999999886655433 4899999999999865 589999999
Q ss_pred CCEEEEecChhHH
Q 000351 814 EGMVKEEGTFEDL 826 (1623)
Q Consensus 814 ~G~i~~~g~~~~l 826 (1623)
+|++++.|+++++
T Consensus 228 ~g~i~~~g~~~~~ 240 (262)
T PRK09984 228 QGHVFYDGSSQQF 240 (262)
T ss_pred CCEEEEeCCHHHh
Confidence 9999999999986
No 500
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3e-34 Score=310.11 Aligned_cols=161 Identities=24% Similarity=0.372 Sum_probs=144.3
Q ss_pred EEEEeeEEEcCCCCCCCccccceeEecCCcEEEEEcCCCCChhHHHHHHcCCccCCCCCeEEEcC--cEEEEccCcccCc
Q 000351 615 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG--TVAYVPQVSWIFN 692 (1623)
Q Consensus 615 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~ivG~~GsGKSTLl~~l~G~~~~~~g~~~~~~~--~iay~~Q~~~l~~ 692 (1623)
|+++|++++|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++| .+.+.+ .++|++|++.+++
T Consensus 1 i~~~~~~~~~~~--~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G-~i~~~~~~~i~~~~q~~~~~~ 77 (166)
T cd03223 1 IELENLSLATPD--GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSG-RIGMPEGEDLLFLPQRPYLPL 77 (166)
T ss_pred CEEEEEEEEcCC--CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc-eEEECCCceEEEECCCCcccc
Confidence 468999999963 35799999999999999999999999999999999999999999 555544 7999999999989
Q ss_pred ccHHHHHhcCCCCCHHHHHHHHHHhCchhHHhcCCCCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCcccCcC
Q 000351 693 ATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALD 772 (1623)
Q Consensus 693 ~Tv~enI~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSGGQkqRvaLARal~~~~~illLDep~s~LD 772 (1623)
.|++||+.++ ....||||||||++||||++++|+++||||||++||
T Consensus 78 ~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD 123 (166)
T cd03223 78 GTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALD 123 (166)
T ss_pred ccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccC
Confidence 9999999864 235899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCcEEEEEcCCcchhhhcCEEEEEeCC
Q 000351 773 AHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEG 815 (1623)
Q Consensus 773 ~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~d~i~~l~~G 815 (1623)
+++.+++.+.+.. . ++|+|++||+.+....||++++|++|
T Consensus 124 ~~~~~~l~~~l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 124 EESEDRLYQLLKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred HHHHHHHHHHHHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 9999999875543 3 68999999999988889999999875
Done!