Query 000351
Match_columns 1623
No_of_seqs 660 out of 6461
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 21:24:19 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/000351.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_4-8//hhsearch_pdb/000351hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1597.6 118.0 1218 246-1475 1-1316(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1308.8 105.6 1159 299-1476 46-1271(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 751.9 62.9 516 955-1478 137-656 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 711.6 49.6 514 955-1476 109-626 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 679.6 57.2 558 904-1474 27-589 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 678.9 61.2 563 901-1474 10-577 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 661.9 58.0 558 905-1474 5-575 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 660.4 67.6 560 903-1475 14-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 658.2 69.3 558 904-1474 15-578 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 655.3 64.9 561 905-1475 10-583 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1597.56 Aligned_cols=1218 Identities=19% Similarity=0.210 Sum_probs=942.2
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC---------------CCCCHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 998132-377787899899930407999999999998722---------------899815899999997-789999999
Q 000351 246 LMKKGY-EKFITEKDVWKLDTWDQTETLNNQFQKCWAKES---------------QRPKPWLLRALNSSL-GGRFWWGGF 308 (1623)
Q Consensus 246 l~~~g~-~~~L~~~dl~~l~~~~~s~~l~~~~~~~w~~~~---------------~~~~~sL~~al~~~~-~~~~~~~~~ 308 (1623)
+++.|. |++|+..|.+.+.|++..+...+.+++.|.... ..++.+ ++.+++.- +++.++.++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~ 79 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFI 79 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC-HHHHHHCCCHHHHHHHHH
T ss_conf 9877310068763544567950111000011345424355433431001223202568779-999731567678999999
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHCCC---------------C-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999---99999999860279---------------7-26-----99999999999999999999999999
Q 000351 309 WKIGNDLSQFVGP---LLLNQLLQSMQQDG---------------P-AW-----IGYIYAFSIFVGVVLGVLCEAQYFQN 364 (1623)
Q Consensus 309 ~~l~~~~~~~~~P---~ll~~ii~~l~~~~---------------~-~~-----~g~~l~~~~~~~~~~~~~~~~~~~~~ 364 (1623)
-.++..+...+.| ++++.+++.+.+.. . .. ....++..++...++..++...+.+.
T Consensus 80 g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~ 159 (1321)
T 4f4c_A 80 GTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTC 159 (1321)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999701000145430003443100168999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999996299444327898899999999999999999-9999999899999999999978976999
Q 000351 365 VMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYNELGVAS 443 (1623)
Q Consensus 365 ~~r~~~~ir~~L~~~iy~K~l~l~~~~~~~~~~G~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~~~ 443 (1623)
....+.++...++..+|+|.++++..++++.++|+++|++++|++++++++ ..+..++..++.++.++++++...+..+
T Consensus 160 ~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~ 239 (1321)
T 4f4c_A 160 YLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLT 239 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999788989987998489999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999993699999856509999999999999999999999999
Q 000351 444 LLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFRKAQFLA 523 (1623)
Q Consensus 444 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~l~~ik~IK~~~~e~~~~~~i~~~R~~El~~~~~~~~~~ 523 (1623)
++.++++++.+++..++.+++.+..++.++..+++.+.++|.++|||+||+|+||+.+.+++.+..++..+...+.....
T Consensus 240 lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1321)
T 4f4c_A 240 LVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFL 319 (1321)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998399999821429999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999999999--99999999988279758889999999999999999999999999999999999999984120123
Q 000351 524 ACNSFILNSIPVL--VTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFLLAEEKI 601 (1623)
Q Consensus 524 ~~~~~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~ 601 (1623)
............+ +.+++++.+.+.++.++++.+|+++.++..+..|+..++..++.+.++.+|++||.++++.++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 399 (1321)
T 4f4c_A 320 GISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVI 399 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999959986999999999999999999989999999999999999999997178534
Q ss_pred CCCCC---CCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf 59999---999999918998369981899999830011157349969999907999946799988088668998748873
Q 000351 602 LLPNP---PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR 678 (1623)
Q Consensus 602 ~~~~~---~~~~~~~~I~~~~vsf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~~~~~~ 678 (1623)
+...+ ...+..+.|+|+|++|+|+..+++++|+|+||++++|++++|||++|||||||+++|+|+++|.+| .+.+.
T Consensus 400 ~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G-~I~id 478 (1321)
T 4f4c_A 400 DSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKG-KITID 478 (1321)
T ss_dssp SCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEE-EEEET
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCC-CCCCC
T ss_conf 56665565677888767999855407999987433331886228827899805898577888875456516448-61579
Q ss_pred C-------------CEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf 9-------------1899816865676228999704999-9989999999980864688219999962006899856938
Q 000351 679 G-------------TVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 744 (1623)
Q Consensus 679 ~-------------~iay~~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~di~~l~~g~~t~ig~~g~~LSGG 744 (1623)
| +||||+|+||||++||||||+||++ .+++++.++++.|++++|++.||+||+|.|||+|.+||||
T Consensus 479 G~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGG 558 (1321)
T 4f4c_A 479 GVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGG 558 (1321)
T ss_dssp TEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHH
T ss_pred CCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHH
T ss_conf 96501125999850466658753320786167886415522099999999875654688708888860755898877777
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHH
Q ss_conf 99999999987029989998176667698889999999984520996899982796604303989998097799942956
Q 000351 745 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFE 824 (1623)
Q Consensus 745 QkqRiaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~G~~~ 824 (1623)
|||||+||||+|++|+|+|||||||+||+++++.+ ++++.++++++|+|+|||+++.++.||+|++|++|+|+++|+|+
T Consensus 559 QkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i-~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~ 637 (1321)
T 4f4c_A 559 QKQRIAIARALVRNPKILLLDEATSALDAESEGIV-QQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHR 637 (1321)
T ss_dssp HHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHH-HHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHH
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHH
T ss_conf 87999999987259998998455446887899999-99999984798899973638789868989996399651368999
Q ss_pred HHHHCCHHHHHHHHHHCCHHHHHCCCCCC----CCCCCC-CC----CCCCCCCC---CCCC-------CCC----CCCCC
Q ss_conf 78516802798688521000111012468----654567-88----88778888---9998-------543----33223
Q 000351 825 DLSNNGELFQKLMENAGKMEEYVEEKEDG----ETVDNK-TS----KPAANGVD---NDLP-------KEA----SDTRK 881 (1623)
Q Consensus 825 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~----~~~~~~~~---~~~~-------~~~----~~~~~ 881 (1623)
||++.++.|.+++..+...+...+..+.. +..... .. .....+.. .... ... ..++.
T Consensus 638 eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1321)
T 4f4c_A 638 ALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEER 717 (1321)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------CC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 99985327999999622122223323344332232111222223422222221102211101321245677402577753
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCC----CCCCCCHHHH
Q ss_conf 334501244675530264117789998985144699999999999999998610000212034576----5778813899
Q 000351 882 TKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSS----LKTHGPLFYN 957 (1623)
Q Consensus 882 ~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~~~~ 957 (1623)
..........++.++.+...+.+++.|....+.++.+++.+++.++.........+|+..|.+... .......+|.
T Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1321)
T 4f4c_A 718 IGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWA 797 (1321)
T ss_dssp CCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 15403899999999707863109999999877899999999999999999999999999999875179345566789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 99999987999999999999999999999999999999986398422024--7811378987216100303568999999
Q 000351 958 TIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMF 1035 (1623)
Q Consensus 958 ~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ff~~--~~~G~ilnR~s~Di~~id~~l~~~~~~~ 1035 (1623)
.+|.+++++..++.++..+++...+.+.++++|.+++++++++|++|||. +|+|+++|||++|++.+|..++..+..+
T Consensus 798 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~ 877 (1321)
T 4f4c_A 798 LMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTV 877 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999988873499333216788848888502505999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 99999776576689889989999999999999999999999999999999863044999999986023999983399999
Q 000351 1036 MGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 1115 (1623)
Q Consensus 1036 ~~~~~~~i~~~~~i~~~~~~~~~~~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~ 1115 (1623)
+..++.+++.++++++.+|.+.+++++++++++....++.+..+.......+..++....+.|+++|+.+||+|++++++
T Consensus 878 ~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~ 957 (1321)
T 4f4c_A 878 ITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTF 957 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99865377770221378689999999988899999999999999999999999888988999999627988861414889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999978899999999999998889999999999999999999998--7169--765213579999999999999999999
Q 000351 1116 ADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV--VQNG--SAENQEAFASTMGLLLSYALNITSLLT 1191 (1623)
Q Consensus 1116 ~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~li~~~~~~~~~~~~v--~~~~--~~~~~~~~~~~~Gl~l~~~~~l~~~l~ 1191 (1623)
.+++.+..+...+..+.....+.+.......+..+...+...++. ...+ +.+ .+.+...+.+......++.
T Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 1032 (1321)
T 4f4c_A 958 YENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQ-----PMRVLRVMYAITISTSTLG 1032 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSC-----HHHHHHHHHHHHTTTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999875788753765421-----4789999999987788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEE
Q ss_conf 9999999999997899999984229998974345899999999975289997899827999-983111026867999789
Q 000351 1192 AVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVG 1270 (1623)
Q Consensus 1192 ~~~~~~~~~e~~~~av~Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~-~~vL~~isl~I~~Gekvg 1270 (1623)
.+...+..++..+.+++|+.++.+.+++.+ +...+++.||..|.|+|+||+|+|+.+. .+||+|+||+|+|||+||
T Consensus 1033 ~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~va 1109 (1321)
T 4f4c_A 1033 FATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLA 1109 (1321)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEE
T ss_conf 999999999999999998999860766577---76677878888881899987985799998821245169988989999
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHH
Q ss_conf 9557998954599886034548873799979736998958764205888477766666577603779---9999989999
Q 000351 1271 IVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPF---SEHSDADLWE 1347 (1623)
Q Consensus 1271 IvGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~---~~~~d~~i~~ 1347 (1623)
||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||..+ .+++|+++|+
T Consensus 1110 IVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~ 1189 (1321)
T 4f4c_A 1110 LVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEE 1189 (1321)
T ss_dssp EECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHH
T ss_pred EECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHH
T ss_conf 98999981999999995686389978999999865499999985459987899732723999974549999999999999
Q ss_pred HHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99993289999862489502630299988945899997999640299699995888899988799999999988399489
Q 000351 1348 ALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTM 1427 (1623)
Q Consensus 1348 aL~~~~l~~~i~~lp~gLdt~v~e~g~~LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~Tv 1427 (1623)
|++.++++++|+++|+||||.++|+|.+||||||||+|||||++|+|+|||||||||+||++||+.||++|++.+++||+
T Consensus 1190 Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~Tv 1269 (1321)
T 4f4c_A 1190 AARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTC 1269 (1321)
T ss_dssp HHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEE
T ss_pred HHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 99982984999717678999823889156999999999999997179989996811157899999999999997399989
Q ss_pred EEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 996038013430398999959568430593678512899279999983
Q 000351 1428 LIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1428 I~IaHrl~ti~~~DrI~VL~~G~ive~G~~~~Ll~~~~~~f~~l~~~~ 1475 (1623)
|+||||++|+.+||||+||++|+|+|+|+|+||+++ +|.|++|++.+
T Consensus 1270 I~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1270 IVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQ 1316 (1321)
T ss_dssp EEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C----------
T ss_pred EEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 996068999996999999989899998888999849-80999999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1308.77 Aligned_cols=1159 Identities=19% Similarity=0.240 Sum_probs=859.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------C-----------CHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7789999999999999999999999999999860279---------7-----------2699999999999999999999
Q 000351 299 LGGRFWWGGFWKIGNDLSQFVGPLLLNQLLQSMQQDG---------P-----------AWIGYIYAFSIFVGVVLGVLCE 358 (1623)
Q Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~ii~~l~~~~---------~-----------~~~g~~l~~~~~~~~~~~~~~~ 358 (1623)
.++.++++.+..++..++....|++++.+++.+.... . ......+++.++...++..++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (1284)
T 3g5u_A 46 DRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVA 125 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999861344433222222111110024468899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999996299444327898899999999999999999-9999999899999999999978
Q 000351 359 AQYFQNVMRVGFRLRSTLVAAVFRKSLRITHEARKNFASGKITNLMTTDAEQLQQVC-QALHTLWSAPFRIIISLVLLYN 437 (1623)
Q Consensus 359 ~~~~~~~~r~~~~ir~~L~~~iy~K~l~l~~~~~~~~~~G~i~nlms~Dv~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~ 437 (1623)
....+...+.+.++...++..+|+|.++++..++++.++|+++|++++|++.+++.+ ..+..+...++.++.++++++.
T Consensus 126 ~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~ 205 (1284)
T 3g5u_A 126 YIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFT 205 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999869989975688778999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 97699999999999999999999999999999999999999999999993699999856509999999999999999999
Q 000351 438 ELGVASLLGALLLVFMFPVQTFIISRMQKLTKEGLQRTDKRIGLMNEILAAMDAVKCYAWENSFQSKVQNVRNDELSWFR 517 (1623)
Q Consensus 438 ~lg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~l~~ik~IK~~~~e~~~~~~i~~~R~~El~~~~ 517 (1623)
..+..+++.+++++++..+..++.++..+..++..+..++..+...|.++|+++||.|++|+.+.+++.+..++..+...
T Consensus 206 ~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~~~ 285 (1284)
T 3g5u_A 206 RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGI 285 (1284)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999997879999846539999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999--999999999988279758889999999999999999999999999999999999999984
Q 000351 518 KAQFLAACNSFILNSIPV--LVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNMITQVVNANVSLKRMEEFL 595 (1623)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL 595 (1623)
+..........+...... .+.+++++.+.+..+.++++.+++++..+.....|+..+...+..+.++.++.+|+.+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l 365 (1284)
T 3g5u_A 286 KKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKII 365 (1284)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999929988999999999999999999999999999999999999999997
Q ss_pred CCCCCCCC-CC--CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 12012359-99--9999999918998369981899999830011157349969999907999946799988088668998
Q 000351 596 LAEEKILL-PN--PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD 672 (1623)
Q Consensus 596 ~~~e~~~~-~~--~~~~~~~~~I~~~~vsf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G 672 (1623)
+.++.... .. ....+..+.|+++|++|+|+++.+.++|+|+||++++|++++|+|+||||||||+++|+|+++|++|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~~G 445 (1284)
T 3g5u_A 366 DNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPLDG 445 (1284)
T ss_dssp SCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCSEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCE
T ss_conf 28986776665677777777718999989976999987101254589759988999899999799999998078899973
Q ss_pred CEEEECC-------------CEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 7488739-------------1899816865676228999704999-9989999999980864688219999962006899
Q 000351 673 ASAVIRG-------------TVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERG 738 (1623)
Q Consensus 673 ~~~~~~~-------------~iay~~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~di~~l~~g~~t~ig~~g 738 (1623)
.+.+.| .|+||+|+||+|++||+|||.+|.+ .+++++.++++.|++.++++.+|+|++|.+|++|
T Consensus 446 -~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g 524 (1284)
T 3g5u_A 446 -MVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGERG 524 (1284)
T ss_dssp -EEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSSS
T ss_pred -EEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCC
T ss_conf -8999999877579999986548986887537766999974579899999999999982969999746563345014787
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEE
Q ss_conf 85693899999999987029989998176667698889999999984520996899982796604303989998097799
Q 000351 739 VNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVK 818 (1623)
Q Consensus 739 ~~LSGGQkqRiaLARal~~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 818 (1623)
.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ .+....+|+|+|+|||+++.+..||+|++|++|+++
T Consensus 525 ~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i~ 603 (1284)
T 3g5u_A 525 AQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQA-ALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIV 603 (1284)
T ss_dssp CSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHH-HHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEE
T ss_conf 8659999999999999952999899979877779999999999-999973999899994077899749989999899999
Q ss_pred EECCHHHHHHCCHHHHHHHHHHCCHHHHHCCCCC---CCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9429567851680279868852100011101246---8654567--8888778888999854333223334501244675
Q 000351 819 EEGTFEDLSNNGELFQKLMENAGKMEEYVEEKED---GETVDNK--TSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQE 893 (1623)
Q Consensus 819 ~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 893 (1623)
++|+|+++++.++.|..+...+............ ....... ................... ............++
T Consensus 604 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 682 (1284)
T 3g5u_A 604 EQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSI-CGPHDQDRKLSTKE 682 (1284)
T ss_dssp CEECHHHHHHTTSHHHHHHHHTC---------------------------------------------------------
T ss_pred EECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHH
T ss_conf 97889999867877999999743002211133333322222344333333332000345433344-56422332110245
Q ss_pred HH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH----HCCCCCCC--CCCCHHHHHHHHHHHH
Q ss_conf 53--0264117789998985144699999999999999998610000212----03457657--7881389999999987
Q 000351 894 ER--ETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSY----WTDQSSLK--THGPLFYNTIYSLLSF 965 (1623)
Q Consensus 894 ~~--~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~----w~~~~~~~--~~~~~~~~~iy~~l~~ 965 (1623)
.. ......+..+..|.+.. ++.+++.+++.++...+....++++.. |.+..... ......|..+|.++++
T Consensus 683 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i 760 (1284)
T 3g5u_A 683 ALDEDVPPASFWRILKLNSTE--WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGI 760 (1284)
T ss_dssp -CCCCCSCCCTTHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 553136625899999984515--799999999999999999999999999999985568503367799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999998639842202--4781137898721610030356899999999999776
Q 000351 966 GQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLL 1043 (1623)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i 1043 (1623)
...++.++..+.+...+.+...++|.+++++++++|+.||+ .+++|+++||+++|++.++..++..+..++..+..++
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~ 840 (1284)
T 3g5u_A 761 ISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLG 840 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999839988875789988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Q ss_conf 5766898899899999---9999999999999999999999999986304499999998602399998339999999997
Q 000351 1044 STFVLIGIVSTMSLWA---IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADING 1120 (1623)
Q Consensus 1044 ~~~~~i~~~~~~~~~~---~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~ 1120 (1623)
..+++++..+|.+.++ .+|+++++...+..+. +..........+.....+.|+++|+.+||+|++++++.+++.
T Consensus 841 ~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~ 917 (1284)
T 3g5u_A 841 TGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKML---SGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYA 917 (1284)
T ss_dssp HHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 99999999969999999999999999999999999---999999999999999999999988999998465999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999888999999999999999---9999998--71697652135799999999999999999999999
Q 000351 1121 KSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW---LTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLR 1195 (1623)
Q Consensus 1121 ~~~d~~~~~~~~~~~~~~wl~~~l~li~~~~~~---~~~~~~v--~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~ 1195 (1623)
+..+...+..... ..|.+....+...+..+ +...+.. ...+..+ .+.+...+.+......++..+..
T Consensus 918 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 989 (1284)
T 3g5u_A 918 QSLQIPYRNAMKK---AHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMT-----FENVLLVFSAIVFGAMAVGQVSS 989 (1284)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSC-----STTHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999---999999999999999999999999999999909806-----99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCCCEEEEECCCCEEEEECC
Q ss_conf 99999999789999998422999897434589999999997528999789982799-99831110268679997899557
Q 000351 1196 LASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGR 1274 (1623)
Q Consensus 1196 ~~~~~e~~~~av~Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGr 1274 (1623)
.+..+.....+.+|+.++.+.+++.+...+ ...+.++..|.|+|+||+|+|++. ..++|+|+||+|++||++|||||
T Consensus 990 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~ 1067 (1284)
T 3g5u_A 990 FAPDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGS 1067 (1284)
T ss_dssp SSCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECC
T ss_conf 999999999999999999838876666555--665456777857999989977999987002030599769988999889
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC---CCCHHHHHHHHHH
Q ss_conf 9989545998860345488737999797369989587642058884777666665776037799---9999899999999
Q 000351 1275 TGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDADLWEALER 1351 (1623)
Q Consensus 1275 sGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~---~~~d~~i~~aL~~ 1351 (1623)
||||||||+++|+|+++|++|+|.+||+|+++++++++|+++++|||||.+|++|||+|+.+.. ..++++++++++.
T Consensus 1068 sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~ 1147 (1284)
T 3g5u_A 1068 SGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKE 1147 (1284)
T ss_dssp SSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 99978999999946867899779899998000789999702689877874066669999746687789999999999998
Q ss_pred HCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 32899998624895026302999889458999979996402996999958888999887999999999883994899960
Q 000351 1352 AHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1431 (1623)
Q Consensus 1352 ~~l~~~i~~lp~gLdt~v~e~g~~LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~Ia 1431 (1623)
++++++++++|.||||.++|+|.+||||||||+|||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||
T Consensus 1148 ~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~is 1227 (1284)
T 3g5u_A 1148 ANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIA 1227 (1284)
T ss_dssp HTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEEC
T ss_pred HCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 39599997270424561178889338999999999999974999999868755579999999999999867999899995
Q ss_pred CCCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 380134303989999595684305936785128992799999832
Q 000351 1432 HRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1432 Hrl~ti~~~DrI~VL~~G~ive~G~~~~Ll~~~~~~f~~l~~~~~ 1476 (1623)
||++++..||||+||++|+++|.|+|++|+++ ++.|++|++.+.
T Consensus 1228 H~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~ 1271 (1284)
T 3g5u_A 1228 HRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQA 1271 (1284)
T ss_dssp SCTTGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC
T ss_pred CCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 58799980998999989989997789999847-777999999976
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=751.94 Aligned_cols=516 Identities=20% Similarity=0.272 Sum_probs=445.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 89999999987999999999999999999999999999999986398422024781137898721610030356899999
Q 000351 955 FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNM 1034 (1623)
Q Consensus 955 ~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~ 1034 (1623)
.+...|..++++..++.++..+++.+.+.+...++|.++++++++.|++|||++++|+++||+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999977657668988998999999999999999999999999999999986304499999998602399998339999
Q 000351 1035 FMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR 1114 (1623)
Q Consensus 1035 ~~~~~~~~i~~~~~i~~~~~~~~~~~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~ 1114 (1623)
++..+..+++.++++++.+|.+.++.+..++++..+..++.+..+...+......+...+.+.|.++|+++||+|+++++
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999997889999999999999888999999999999999999999--871697652135799999999999999999999
Q 000351 1115 MADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTA 1192 (1623)
Q Consensus 1115 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~li~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~ 1192 (1623)
+.+++.+..+...+..........+......++..+...++..++ .+..+..+ .+.+...+.+...+..++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt-----~g~~~~~~~~~~~~~~~l~~ 371 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLN-----FGDMLTTFSSVMMGSMALGL 371 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSC-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999999959986-----99999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC-CCCCCCCCEEEEECCCCEEEE
Q ss_conf 9999999999978999999842299989743458999999999752899978998279-999831110268679997899
Q 000351 1193 VLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVGI 1271 (1623)
Q Consensus 1193 ~~~~~~~~e~~~~av~Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~-~~~~vL~~isl~I~~GekvgI 1271 (1623)
+...+..+.....+.+|+.++.+.+++.+... .......+..|.|+|+||+|+|+. ...++|+|+||+|++||++||
T Consensus 372 ~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vai 449 (1321)
T 4f4c_A 372 AGPQLAVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVAL 449 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEE
T ss_conf 99999999999999999999971785345666--5565677888767999855407999987433331886228827899
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHH
Q ss_conf 5579989545998860345488737999797369989587642058884777666665776037799-999989999999
Q 000351 1272 VGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALE 1350 (1623)
Q Consensus 1272 vGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~-~~~d~~i~~aL~ 1350 (1623)
|||||||||||+++|+|+|+|++|+|.+||+|+++++++++|++|+||||+|+||+||||+||..+. ..+++++++|++
T Consensus 450 vG~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~ 529 (1321)
T 4f4c_A 450 VGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACK 529 (1321)
T ss_dssp EECSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 80589857788887545651644861579965011259998504666587533207861678864155220999999998
Q ss_pred HHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 93289999862489502630299988945899997999640299699995888899988799999999988399489996
Q 000351 1351 RAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLII 1430 (1623)
Q Consensus 1351 ~~~l~~~i~~lp~gLdt~v~e~g~~LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~I 1430 (1623)
.++++++++++|+|+||.+||+|.+||||||||++||||++++|+|||||||||+||++||+.++++|++..+++|+|+|
T Consensus 530 ~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iii 609 (1321)
T 4f4c_A 530 MANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIII 609 (1321)
T ss_dssp HTTCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEE
T ss_pred HCCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 75654688708888860755898877777879999999872599989984554468878999999999998479889997
Q ss_pred ECCCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 038013430398999959568430593678512899279999983243
Q 000351 1431 AHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAA 1478 (1623)
Q Consensus 1431 aHrl~ti~~~DrI~VL~~G~ive~G~~~~Ll~~~~~~f~~l~~~~~~~ 1478 (1623)
|||++++.+||+|+||++|+|+|.|+|+||+++ ++.|++++..+...
T Consensus 610 aHrls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~~~ 656 (1321)
T 4f4c_A 610 AHRLSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQTFT 656 (1321)
T ss_dssp CSCTTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHHCC
T ss_conf 363878986898999639965136899999985-32799999962212
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=711.62 Aligned_cols=514 Identities=20% Similarity=0.293 Sum_probs=433.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 89999999987999999999999999999999999999999986398422024781137898721610030356899999
Q 000351 955 FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNM 1034 (1623)
Q Consensus 955 ~~~~iy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~ 1034 (1623)
.|..+|.+++++..++.++..+++...+.+...++|.+++++++++|+.|||++++|+++||+++|++.++..++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998699899756887789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999977657668988998999999999999999999999999999999986304499999998602399998339999
Q 000351 1035 FMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR 1114 (1623)
Q Consensus 1035 ~~~~~~~~i~~~~~i~~~~~~~~~~~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~ 1114 (1623)
++..+..+++.++++++.+|.+.+++++++++++.+..++.+..++..+......++..+++.|+++|+.+||+|+++++
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999997889999999999999888999999999999999999999--871697652135799999999999999999999
Q 000351 1115 MADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTA 1192 (1623)
Q Consensus 1115 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~li~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~ 1192 (1623)
+.+++.+..+...+..........+......++..+...+...+. ....+..+ .|.+...+.+.+....++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~-----~g~~~~~~~~~~~~~~~~~~ 343 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYS-----IGQVLTVFFSVLIGAFSVGQ 343 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSC-----SSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999999929988-----99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCCCEEEEECCCCEEEE
Q ss_conf 99999999999789999998422999897434589999999997528999789982799-99831110268679997899
Q 000351 1193 VLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGI 1271 (1623)
Q Consensus 1193 ~~~~~~~~e~~~~av~Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgI 1271 (1623)
+...+..+.....+++|+.++.+.+++.+...+...++ .+..|.|+|+||+|+|+++ ..++|+|+||+|++||++||
T Consensus 344 ~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~i 421 (1284)
T 3g5u_A 344 ASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVAL 421 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEE
T ss_conf 99999999999999999999972898677666567777--7777718999989976999987101254589759988999
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHH
Q ss_conf 5579989545998860345488737999797369989587642058884777666665776037799-999989999999
Q 000351 1272 VGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALE 1350 (1623)
Q Consensus 1272 vGrsGSGKSTLl~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~-~~~d~~i~~aL~ 1350 (1623)
|||||||||||+++|.|+++|++|+|.+||+|+++++++++|++|++|||+|.+|++||++|+.+.. ..++++++++++
T Consensus 422 vG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~ 501 (1284)
T 3g5u_A 422 VGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVK 501 (1284)
T ss_dssp ECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 89999979999999807889997389999998775799999865489868875377669999745798999999999999
Q ss_pred HHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 93289999862489502630299988945899997999640299699995888899988799999999988399489996
Q 000351 1351 RAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLII 1430 (1623)
Q Consensus 1351 ~~~l~~~i~~lp~gLdt~v~e~g~~LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~I 1430 (1623)
.++++++++++|.|+|+.++++|.+||||||||+|||||++++|+|||||||||+||++|++.+++.+++..+++|+|+|
T Consensus 502 ~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~i 581 (1284)
T 3g5u_A 502 EANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVI 581 (1284)
T ss_dssp HTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 82969999746563345014787865999999999999995299989997987777999999999999997399989999
Q ss_pred ECCCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 0380134303989999595684305936785128992799999832
Q 000351 1431 AHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTG 1476 (1623)
Q Consensus 1431 aHrl~ti~~~DrI~VL~~G~ive~G~~~~Ll~~~~~~f~~l~~~~~ 1476 (1623)
|||++++.+||+|+||++|+++|.|+|++|+++ ++.|++++....
T Consensus 582 tH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 626 (1284)
T 3g5u_A 582 AHRLSTVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQT 626 (1284)
T ss_dssp CSCHHHHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC
T ss_pred ECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 407789974998999989999997889999867-877999999743
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=679.64 Aligned_cols=558 Identities=25% Similarity=0.362 Sum_probs=471.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899989851446999999999999999986100002120345765778--813899999999879999999999999999
Q 000351 904 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH--GPLFYNTIYSLLSFGQVLVTLANSYWLIIS 981 (1623)
Q Consensus 904 vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~--~~~~~~~iy~~l~~~~~~~~~~~~~~~~~~ 981 (1623)
.++.|++.. ++.++..+++.++..++....+++++.+.+....... ....+..++.++.+...++.++..++....
T Consensus 27 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (598)
T 3qf4_B 27 RLLGYLRPH--TFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTL 104 (598)
T ss_dssp HHGGGTGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999--999999999999999999999999999999997368889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986398422024781137898721610030356899999999999776576689889989999999
Q 000351 982 SLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIM 1061 (1623)
Q Consensus 982 ~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1061 (1623)
+.+...++|.++++++++.|+.||+++++|+++||+++|++.++..+...+..++..+..+++.+++++..+|++.++.+
T Consensus 105 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l 184 (598)
T 3qf4_B 105 SQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTL 184 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997799999768888999999999999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986304499999998602399998339999999997889999999999999888999
Q 000351 1062 PLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLA 1141 (1623)
Q Consensus 1062 ~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1141 (1623)
..+++++.+..++.+..++..+......+.+.+.+.|+++|+.+||+|++++.+.+++.+..+...+..........+..
T Consensus 185 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (598)
T 3qf4_B 185 SIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLP 264 (598)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999737999997487099999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999999998--71697652135799999999999999999999999999999997899999984229998
Q 000351 1142 IRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSE 1219 (1623)
Q Consensus 1142 ~~l~li~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~~~~~~e~~~~av~Ri~~~~~~~~e 1219 (1623)
...+++..+...++..++. ...+..+ .+.+...+.+...+..++..+...+..++....+++|+.++.+.|++
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~l~~~g~ls-----~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 339 (598)
T 3qf4_B 265 PLMNMVNNLGFALISGFGGWLALKDIIT-----VGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEE 339 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTSSC-----HHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999999999999999999859978-----99999999999999999999999999999999999999999768877
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 97434589999999997528999789982799998311102686799978995579989545998860345488737999
Q 000351 1220 APLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILI 1299 (1623)
Q Consensus 1220 ~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~I 1299 (1623)
.+. ....+.++..|.|+++||+|+|+++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+
T Consensus 340 ~~~----~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~ 414 (598)
T 3qf4_B 340 KDD----PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILV 414 (598)
T ss_dssp CCC----SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEE
T ss_pred CCC----CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEE
T ss_conf 777----7777777777718999989977999-86012227998699889998999996999999994585799808999
Q ss_pred CCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCH
Q ss_conf 797369989587642058884777666665776037799-9999899999999328999986248950263029998894
Q 000351 1300 DGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 1378 (1623)
Q Consensus 1300 dG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~-~~~d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~g~~LSg 1378 (1623)
||+|+++++.+.+|+++++|||+|.+|++|++||+.... ..++++++++++.++++++++++|.|+|+.++++|.+|||
T Consensus 415 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSg 494 (598)
T 3qf4_B 415 DGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQ 494 (598)
T ss_dssp TTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCH
T ss_pred CCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCH
T ss_conf 99983018899998410899079823246399997447999999999999999697888974645323642278898799
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHH
Q ss_conf 58999979996402996999958888999887999999999883994899960380134303989999595684305936
Q 000351 1379 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPE 1458 (1623)
Q Consensus 1379 GQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~VL~~G~ive~G~~~ 1458 (1623)
|||||++||||++++|+||+||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+
T Consensus 495 Gq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~ 574 (598)
T 3qf4_B 495 GQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHD 574 (598)
T ss_dssp HHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHH
T ss_conf 99999999999964999999989766799999999999999980899899994277899719989999899999877899
Q ss_pred HHHHCCCCHHHHHHHH
Q ss_conf 7851289927999998
Q 000351 1459 ELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1459 ~Ll~~~~~~f~~l~~~ 1474 (1623)
+|+++ ++.|++++..
T Consensus 575 ~l~~~-~~~~~~~~~~ 589 (598)
T 3qf4_B 575 ELIQK-RGFYYELFTS 589 (598)
T ss_dssp HHHHT-TCHHHHHHHH
T ss_pred HHHHC-CCHHHHHHHH
T ss_conf 99867-8779999999
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=678.85 Aligned_cols=563 Identities=22% Similarity=0.334 Sum_probs=453.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 17789998985144699999999999999998610000212034576577881--3899999999879999999999999
Q 000351 901 SFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP--LFYNTIYSLLSFGQVLVTLANSYWL 978 (1623)
Q Consensus 901 ~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~--~~~~~iy~~l~~~~~~~~~~~~~~~ 978 (1623)
.++.++.|++.. ++.+++.+++.++..++....+++++.+.+......... ..+...+.++.+...++.++..++.
T Consensus 10 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (587)
T 3qf4_A 10 GSKTLARYLKPY--WIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTVFA 87 (587)
T ss_dssp CCCCGGGGTGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 499999999999--999999999999999999999999999999987369879999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999986398422024781137898721610030356899999999999776576689889989999
Q 000351 979 IISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLW 1058 (1623)
Q Consensus 979 ~~~~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~ 1058 (1623)
...+.+...++|.++++++++.|+.||+++++|+++||+++|++.++..+...+..++.....++..+++++..+|.+.+
T Consensus 88 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 88 SYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889799765888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999986304499999998602399998339999999997889999999999999888
Q 000351 1059 AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR 1138 (1623)
Q Consensus 1059 ~~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1138 (1623)
+++..+++++.+..++.+..++..+...+..+.+.+.+.|+++|+.+||+|++++.+.+++.+..+...+..........
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999999--871697652135799999999999999999999999999999997899999984229
Q 000351 1139 WLAIRLEIVGGLMIWLTATFA--VVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL 1216 (1623)
Q Consensus 1139 wl~~~l~li~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~~~~~~e~~~~av~Ri~~~~~~ 1216 (1623)
+......++..+...++..+. ....+..+ .+.+...+.+...+..++..+...+..+.....+.+|+.++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt-----~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 322 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQME-----IGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNE 322 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999999999999999849938-----99999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 99897434589999999997528999789982799998311102686799978995579989545998860345488737
Q 000351 1217 PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGR 1296 (1623)
Q Consensus 1217 ~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~ 1296 (1623)
+++.+. ...+.+.++..|.|+++||+|+|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+
T Consensus 323 ~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~ 399 (587)
T 3qf4_A 323 KPAIEE---ADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGR 399 (587)
T ss_dssp CCSCCC---CTTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEE
T ss_pred CCCCCC---CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
T ss_conf 976578---87765668888807997889984899976421117998699889998999997999999992786699867
Q ss_pred EEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCC
Q ss_conf 999797369989587642058884777666665776037799-9999899999999328999986248950263029998
Q 000351 1297 ILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 1375 (1623)
Q Consensus 1297 I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~-~~~d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~g~~ 1375 (1623)
|.+||+|+++++.+++|+++++|||+|.+|++|++||+.... ..++++++++++.++++++++++|.|+|+.+++.|.+
T Consensus 400 i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~ 479 (587)
T 3qf4_A 400 VEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRN 479 (587)
T ss_dssp EEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCS
T ss_pred EEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCC
T ss_conf 98999983407899998413897789867675599998524889999999999999684999975653121275189899
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEEC
Q ss_conf 89458999979996402996999958888999887999999999883994899960380134303989999595684305
Q 000351 1376 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 1455 (1623)
Q Consensus 1376 LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~VL~~G~ive~G 1455 (1623)
||||||||++||||++++|+||+||||||+||+++++.+++.|++..+++|+|+||||++++..||||++|++|+++|.|
T Consensus 480 LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g 559 (587)
T 3qf4_A 480 FSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFG 559 (587)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEEC
T ss_conf 29999999999999972999999979754479999999999999867999899982276889819989999899899978
Q ss_pred CHHHHHHCCCCHHHHHHHH
Q ss_conf 9367851289927999998
Q 000351 1456 TPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1456 ~~~~Ll~~~~~~f~~l~~~ 1474 (1623)
+|+||+++ ++.|++++..
T Consensus 560 ~~~el~~~-~~~~~~~~~~ 577 (587)
T 3qf4_A 560 THKELLEH-CKPYREIYES 577 (587)
T ss_dssp CHHHHHHH-CHHHHHHHHH
T ss_pred CHHHHHHC-CCHHHHHHHH
T ss_conf 89999867-8399999999
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=661.90 Aligned_cols=558 Identities=21% Similarity=0.309 Sum_probs=440.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC-C--C------HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989851446999999999999999986100002120345765778-8--1------3899999999879999999999
Q 000351 905 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G--P------LFYNTIYSLLSFGQVLVTLANS 975 (1623)
Q Consensus 905 y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~--~------~~~~~iy~~l~~~~~~~~~~~~ 975 (1623)
++.|++.. ++.++..+++.++...+....++.+++..+....... . . ..+..++.++.+...++.++..
T Consensus 5 l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 5 YLQFVKPY--KYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHGGG--HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899--9999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999986398422024781137898721610030356899999999999776576689889989
Q 000351 976 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTM 1055 (1623)
Q Consensus 976 ~~~~~~~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~ 1055 (1623)
+.....+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++.....++..+++++..+|+
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 162 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVK 162 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768986999999999999999999999999999999999999999999699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999986304499999998602399998339999999997889999999999999
Q 000351 1056 SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG 1135 (1623)
Q Consensus 1056 ~~~~~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~ 1135 (1623)
+.++.+..+++++.+..++.+..++..+......++..+.+.|+++|+.+||+|++++.+.+++.+..+...+.......
T Consensus 163 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 242 (578)
T 4a82_A 163 LTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTR 242 (578)
T ss_dssp THHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999824999998166499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 888999999999999999---99999987169765213579999999999999999999999999999999789999998
Q 000351 1136 ANRWLAIRLEIVGGLMIW---LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGN 1212 (1623)
Q Consensus 1136 ~~~wl~~~l~li~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~~~~~~e~~~~av~Ri~~ 1212 (1623)
...+......++..+... ..+.+. ...+..+ .+.+...+.+...+..++..+...+..+.....+.+|+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~g~~~-v~~g~lt-----~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 316 (578)
T 4a82_A 243 WNAYSFAAINTVTDIGPIIVIGVGAYL-AISGSIT-----VGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQ 316 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTSCC-----HHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999-9859958-----9999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
Q ss_conf 42299989743458999999999752899978998279999831110268679997899557998954599886034548
Q 000351 1213 YIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL 1292 (1623)
Q Consensus 1213 ~~~~~~e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p 1292 (1623)
+.+.+++.+. ...+.+.++..+.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|
T Consensus 317 ~l~~~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p 393 (578)
T 4a82_A 317 LIDEDYDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDV 393 (578)
T ss_dssp HHTCCCSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCC
T ss_pred HHCCCCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9768976667---8776666777880799999997589997413433799879999999899998599999998467889
Q ss_pred CCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHC
Q ss_conf 8737999797369989587642058884777666665776037799-999989999999932899998624895026302
Q 000351 1293 ERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSE 1371 (1623)
Q Consensus 1293 ~~G~I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~-~~~d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e 1371 (1623)
++|+|.+||+|+++++.+++|++++++||+|.+|++|++||+.... ..++++++++++.++++++++++|.|+|+.+++
T Consensus 394 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~ 473 (578)
T 4a82_A 394 TSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGE 473 (578)
T ss_dssp SEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCG
T ss_pred CCCEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCC
T ss_conf 99679999998442789999600689928983476459999852799988999999998809599997573301025306
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEE
Q ss_conf 99988945899997999640299699995888899988799999999988399489996038013430398999959568
Q 000351 1372 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1451 (1623)
Q Consensus 1372 ~g~~LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~VL~~G~i 1451 (1623)
+|.+||||||||++||||++++|+||+||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++
T Consensus 474 ~g~~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i 553 (578)
T 4a82_A 474 RGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHI 553 (578)
T ss_dssp GGTTSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 88967999999999999997499999997865457999999999999998089979998317899971998999989989
Q ss_pred EEECCHHHHHHCCCCHHHHHHHH
Q ss_conf 43059367851289927999998
Q 000351 1452 LEYDTPEELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1452 ve~G~~~~Ll~~~~~~f~~l~~~ 1474 (1623)
+|.|+|++++++ ++.|+++++.
T Consensus 554 ~~~g~~~el~~~-~~~~~~~~~~ 575 (578)
T 4a82_A 554 VETGTHRELIAK-QGAYEHLYSI 575 (578)
T ss_dssp EEEECHHHHHHT-TSHHHHHHTT
T ss_pred EEECCHHHHHHC-CCHHHHHHHH
T ss_conf 998889999858-8389999985
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=660.39 Aligned_cols=560 Identities=22% Similarity=0.288 Sum_probs=470.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCC-CHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78999898514469999999999999999861000021203457657788-13899-99999987999999999999999
Q 000351 903 KVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG-PLFYN-TIYSLLSFGQVLVTLANSYWLII 980 (1623)
Q Consensus 903 ~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~-~iy~~l~~~~~~~~~~~~~~~~~ 980 (1623)
+.+..|++.. ++.+...+++.++...+....+++++++.+........ ...+. .++.++.+...++.++..+....
T Consensus 14 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (582)
T 3b60_A 14 RRLWPTIAPF--KAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISW 91 (582)
T ss_dssp HHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999--99999999999999999999999999999988436865799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998639842202478113789872161003035689999999999977657668988998999999
Q 000351 981 SSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAI 1060 (1623)
Q Consensus 981 ~~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~ 1060 (1623)
.+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..+..++..+++++..+|++.++.
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 171 (582)
T 3b60_A 92 VSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIIL 171 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999809999978898658999999879999999999999999999999999999999809999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998630449999999860239999833999999999788999999999999988899
Q 000351 1061 MPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL 1140 (1623)
Q Consensus 1061 ~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1140 (1623)
+..+++++.+..++.+..++..+......+.+.+.+.|+++|+.+||+|++++.+.+++.+..+...+........+.|.
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3b60_A 172 VVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSIS 251 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999996199999837689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999998--7169765213579999999999999999999999999999999789999998422999
Q 000351 1141 AIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPS 1218 (1623)
Q Consensus 1141 ~~~l~li~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~~~~~~e~~~~av~Ri~~~~~~~~ 1218 (1623)
....+++..+...++..++. ...+..+ .|.+...+.+...+..++..+...+..+.....+.+|+.++.+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b60_A 252 DPIIQLIASLALAFVLYAASFPSVMDSLT-----AGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQ 326 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSTTSSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999849998-----9999999999999999999999999999999999999999975998
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 89743458999999999752899978998279999831110268679997899557998954599886034548873799
Q 000351 1219 EAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRIL 1298 (1623)
Q Consensus 1219 e~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~ 1298 (1623)
+.+. . +.+.++..+.|+++||+++|+++..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 327 ~~~~---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 401 (582)
T 3b60_A 327 EKDE---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHIL 401 (582)
T ss_dssp SCCC---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEE
T ss_pred CCCC---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 7667---7--7777788884799988997399997441561599769998999899999899999998610689897697
Q ss_pred ECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCC
Q ss_conf 9797369989587642058884777666665776037799--99998999999993289999862489502630299988
Q 000351 1299 IDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 1376 (1623)
Q Consensus 1299 IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~--~~~d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~g~~L 1376 (1623)
+||+|+++++.+.+|++++++||+|.+|++|++||+.... ..++++++++++.++++++++++|+|+|+.++++|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~L 481 (582)
T 3b60_A 402 MDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLL 481 (582)
T ss_dssp ETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSS
T ss_pred ECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998230699999960808806874778789999854599998999999999984979999845041145114798878
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECC
Q ss_conf 94589999799964029969999588889998879999999998839948999603801343039899995956843059
Q 000351 1377 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 1456 (1623)
Q Consensus 1377 SgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~VL~~G~ive~G~ 1456 (1623)
|||||||++||||++++|+||+||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 482 SgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999728998999786555798999999999999967997999945477898599899997888988458
Q ss_pred HHHHHHCCCCHHHHHHHHH
Q ss_conf 3678512899279999983
Q 000351 1457 PEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1457 ~~~Ll~~~~~~f~~l~~~~ 1475 (1623)
|++++++ ++.|+++++.+
T Consensus 562 ~~~l~~~-~~~~~~~~~~q 579 (582)
T 3b60_A 562 HSELLAQ-HGVYAQLHKMQ 579 (582)
T ss_dssp HHHHHHH-TSSHHHHHHHT
T ss_pred HHHHHHC-CCHHHHHHHHH
T ss_conf 9999876-98899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=658.17 Aligned_cols=558 Identities=22% Similarity=0.318 Sum_probs=466.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC-CCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899989851446999999999999999986100002120345765778-8138999-99999879999999999999999
Q 000351 904 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPLFYNT-IYSLLSFGQVLVTLANSYWLIIS 981 (1623)
Q Consensus 904 vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~~~~~~-iy~~l~~~~~~~~~~~~~~~~~~ 981 (1623)
.++.|++.. ++.+.+.+++.++..++....+++++++.+....... ....+.. ++.++.++..++.++..+.....
T Consensus 15 ~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (582)
T 3b5x_A 15 RLWTYIRLY--KAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWV 92 (582)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998899--999999999999999999999999999999986468667999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986398422024781137898721610030356899999999999776576689889989999999
Q 000351 982 SLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIM 1061 (1623)
Q Consensus 982 ~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1061 (1623)
+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..+..++..++++++.+|.+.++.+
T Consensus 93 ~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 172 (582)
T 3b5x_A 93 SGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLI 172 (582)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998699999778987899999998899999999999999999999999999999998299999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999986304499999998602399998339999999997889999999999999888999
Q 000351 1062 PLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLA 1141 (1623)
Q Consensus 1062 ~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1141 (1623)
..+++++.+..++.+..++..+......+.+.+.+.|.++|+.+||+|++++.+.+++.+..+...+........+.|..
T Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3b5x_A 173 VVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIAD 252 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999951999997087599999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999999998--71697652135799999999999999999999999999999997899999984229998
Q 000351 1142 IRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSE 1219 (1623)
Q Consensus 1142 ~~l~li~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~~~~~~e~~~~av~Ri~~~~~~~~e 1219 (1623)
...+++..+...++..++. ...+..+ .|.+...+.+...+..++..+...+..+.....+.+|+.++.+.+++
T Consensus 253 ~~~~~~~~~~~~~i~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 327 (582)
T 3b5x_A 253 PVIQMIASLALFAVLFLASVDSIRAELT-----PGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE 327 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999999999999999999859988-----99999999999999999999999999999999999999999758976
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 97434589999999997528999789982799998311102686799978995579989545998860345488737999
Q 000351 1220 APLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILI 1299 (1623)
Q Consensus 1220 ~~~~~~~~~~~~~wp~~g~I~~~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G~I~I 1299 (1623)
.+. . +.+.++..+.|+++||+++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+
T Consensus 328 ~~~---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~ 402 (582)
T 3b5x_A 328 RDN---G--KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICL 402 (582)
T ss_pred CCC---C--CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 777---7--77777788828999989972899865400416998799989998999997999999996577899987989
Q ss_pred CCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCC
Q ss_conf 797369989587642058884777666665776037799--999989999999932899998624895026302999889
Q 000351 1300 DGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 1377 (1623)
Q Consensus 1300 dG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~--~~~d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e~g~~LS 1377 (1623)
||.|+.+++.+.+|++++++||+|.+|++|++||+.... ..++++++++++.++++++++++|+|+|+.++++|.+||
T Consensus 403 ~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LS 482 (582)
T 3b5x_A 403 DGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLS 482 (582)
T ss_pred CCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCC
T ss_conf 99985638899996485898279905310299998566889999999999999879899998476533451068888479
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCH
Q ss_conf 45899997999640299699995888899988799999999988399489996038013430398999959568430593
Q 000351 1378 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTP 1457 (1623)
Q Consensus 1378 gGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~VL~~G~ive~G~~ 1457 (1623)
||||||++||||++++|+||+||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 483 gGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~ 562 (582)
T 3b5x_A 483 GGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRH 562 (582)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCH
T ss_conf 99999999999997499999997854468999999999999997289989999368899981998999989989997789
Q ss_pred HHHHHCCCCHHHHHHHH
Q ss_conf 67851289927999998
Q 000351 1458 EELLSNEGSSFSKMVQS 1474 (1623)
Q Consensus 1458 ~~Ll~~~~~~f~~l~~~ 1474 (1623)
++++++ ++.|+++++.
T Consensus 563 ~~l~~~-~~~~~~~~~~ 578 (582)
T 3b5x_A 563 ADLLAQ-DGAYAQLHRI 578 (582)
T ss_pred HHHHHC-CCHHHHHHHH
T ss_conf 999848-8589999998
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=655.27 Aligned_cols=561 Identities=22% Similarity=0.291 Sum_probs=456.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC-C----CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989851446999999999999999986100002120345765778-8----138999999998799999999999999
Q 000351 905 LSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G----PLFYNTIYSLLSFGQVLVTLANSYWLI 979 (1623)
Q Consensus 905 y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~----~~~~~~iy~~l~~~~~~~~~~~~~~~~ 979 (1623)
+..|++.. ++.+++.+++.++...+....+++++.+.+....... . ...+..++.++.+...++.++..+...
T Consensus 10 l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (595)
T 2yl4_A 10 LLGLAYPE--RRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQ 87 (595)
T ss_dssp HHHHHGGG--HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998878--9999999999999999999999999999999973574026679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999863984220247811378987216100303568999999999997765766898899899999
Q 000351 980 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 1059 (1623)
Q Consensus 980 ~~~~~~s~~l~~~ll~~il~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~~~i~~~~~~~~~~ 1059 (1623)
..+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++..+..++..++++++.+|.+.++
T Consensus 88 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 167 (595)
T 2yl4_A 88 TSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATF 167 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999981999997779848899999999999999999999999999999999999999981999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999863044999999986023999983399999999978899999999999998889
Q 000351 1060 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 1139 (1623)
Q Consensus 1060 ~~~l~~~~~~i~~~~~~~~r~l~~l~~~~~s~l~~~~~E~l~Gl~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1139 (1623)
++..+++++.+...+.+..++..+......+.+.+.+.|+++|+.+||+|++++++.+++.+..+...+........+.|
T Consensus 168 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (595)
T 2yl4_A 168 VLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAG 247 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998119999983756999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999998--716976521357999999999999999999999999999999978999999842299
Q 000351 1140 LAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 1217 (1623)
Q Consensus 1140 l~~~l~li~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~Gl~l~~~~~l~~~l~~~~~~~~~~e~~~~av~Ri~~~~~~~ 1217 (1623)
......++..+...++..++. ...+..+ .|.+...+.+...+..++..+...+..+.....+.+|+.++.+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 322 (595)
T 2yl4_A 248 FFGATGLSGNLIVLSVLYKGGLLMGSAHMT-----VGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLERE 322 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999869978-----999999999999999999999999999999999999999998389
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 989743458999999999752-8999789982799-99831110268679997899557998954599886034548873
Q 000351 1218 SEAPLVIESNRPPPGWPSSGS-IKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 1295 (1623)
Q Consensus 1218 ~e~~~~~~~~~~~~~wp~~g~-I~~~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrsGSGKSTLl~lL~rl~~p~~G 1295 (1623)
++.+.. ...+ +..+..+. |+++||+++|+++ ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|
T Consensus 323 ~~~~~~--~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G 399 (595)
T 2yl4_A 323 PKLPFN--EGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASG 399 (595)
T ss_dssp CSSCSS--CSBC-CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEE
T ss_pred CCCCCC--CCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 766777--7877-7767899838999889985899888120112799849988999899999799999998258578983
Q ss_pred EEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHC
Q ss_conf 79997973699895876420588847776666657760377999----99989999999932899998624895026302
Q 000351 1296 RILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSE 1371 (1623)
Q Consensus 1296 ~I~IdG~di~~i~~~~lR~~i~~vpQdp~lf~gTIr~NLd~~~~----~~d~~i~~aL~~~~l~~~i~~lp~gLdt~v~e 1371 (1623)
+|.+||+|+.+++.+.+|+++++|||+|.+|++|+++|+..... .++++++++++.++++++++++|.|+|+.+++
T Consensus 400 ~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~ 479 (595)
T 2yl4_A 400 TISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGE 479 (595)
T ss_dssp EEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSS
T ss_pred EEEECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
T ss_conf 79999998111799999732289836883268779999840587766568999999999869799997473201350168
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEE
Q ss_conf 99988945899997999640299699995888899988799999999988399489996038013430398999959568
Q 000351 1372 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 1451 (1623)
Q Consensus 1372 ~g~~LSgGQrQrL~LARALLr~p~ILiLDEpTs~LD~~Te~~I~~~L~~~~~~~TvI~IaHrl~ti~~~DrI~VL~~G~i 1451 (1623)
+|.+||||||||++||||++++|+||+||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|++
T Consensus 480 ~~~~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i 559 (595)
T 2yl4_A 480 KGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKI 559 (595)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 87868999999999999997599999998866689989999999999999659979999468789975998999989989
Q ss_pred EEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 430593678512899279999983
Q 000351 1452 LEYDTPEELLSNEGSSFSKMVQST 1475 (1623)
Q Consensus 1452 ve~G~~~~Ll~~~~~~f~~l~~~~ 1475 (1623)
+|.|+|+++++++++.|+++++.+
T Consensus 560 ~~~g~~~~l~~~~~~~~~~~~~~q 583 (595)
T 2yl4_A 560 TEYGKHEELLSKPNGIYRKLMNKQ 583 (595)
T ss_dssp EEEECSCC------C---------
T ss_pred EEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 997889999747872999999974
Done!