BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000355
(1620 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1MI1|A Chain A, Crystal Structure Of The Ph-Beach Domain Of Human
Neurobeachin
pdb|1MI1|B Chain B, Crystal Structure Of The Ph-Beach Domain Of Human
Neurobeachin
Length = 414
Score = 115 bits (288), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 45/276 (16%)
Query: 314 RWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSK-- 369
RW R E+SNFEYL FLN +AGR + D + V PWV+ S + D RDLSK
Sbjct: 139 RWQRREISNFEYLXFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPI 198
Query: 370 ---SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSV--LRTAVRSV 424
+ R E+ + P+H + + + S+ R P + L
Sbjct: 199 GALNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKF 258
Query: 425 YEPNEYPSTMQRLYQWTP------DECIPEFYCDPQIFYSQHPG----------MTDLAV 468
P+ S++ R ++ + E IPEFY P+ F + + + D+ +
Sbjct: 259 DHPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEXFVNSNGYNLGVREDEVVVNDVDL 318
Query: 469 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNV---------- 518
PPWA PE+F++++R ALES+ VS ++H WID+ FGYK G A+ A NV
Sbjct: 319 PPWAKKPEDFVRINRXALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSV 378
Query: 519 --------MLPSSEPTKPKSVGRL--QLFTQPHPVR 544
+L + + ++ G+ QL +PHP R
Sbjct: 379 NLDSITDPVLREAXEAQIQNFGQTPSQLLIEPHPPR 414
>pdb|1T77|A Chain A, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL
pdb|1T77|B Chain B, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL
pdb|1T77|C Chain C, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL
pdb|1T77|D Chain D, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL
Length = 414
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 47/277 (16%)
Query: 314 RWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSK-- 369
RW E+SNFEYL+FLN +AGR + D + V PWVI S + D + RDLSK
Sbjct: 139 RWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPI 198
Query: 370 ---SKWRLAKGDEQLDFTYSSSEIPH-HVSDECLSELAVCSYKARRLPLSVLRTAVR--S 423
+ R A E+ + ++ ++P H + V ++ R P + ++
Sbjct: 199 GALNPKRAAFFAERYE-SWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGK 257
Query: 424 VYEPNEYPSTMQRLYQWTP------DECIPEFYCDPQIFYSQH----------PGMTDLA 467
+ S++ R ++ + E IPEFY P++F + + ++D+
Sbjct: 258 FDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVE 317
Query: 468 VPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNV--------- 518
+PPWA + EEF+ ++R ALES+ VS ++H WID+ FGYK G A+ A NV
Sbjct: 318 LPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGA 377
Query: 519 ---------MLPSSEPTKPKSVGRL--QLFTQPHPVR 544
+L + + +S G+ QL +PHP R
Sbjct: 378 VNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 414
>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of
The Copi Vesicular Coat
pdb|3MKQ|C Chain C, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of
The Copi Vesicular Coat
pdb|3MKQ|E Chain E, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of
The Copi Vesicular Coat
Length = 814
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVSSSL 1515
++AG +A +WI G + R+F+ +G + + AH Y+ +A P ++S S
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 1516 DKTLRIWDLRRNWPSQPTVFKGH 1538
D T+++W+ NW + T F+GH
Sbjct: 118 DLTVKLWNWENNWALEQT-FEGH 139
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP--NALK----SEWHVRFLMYQL 227
L+H NV +GLL TS+ + L L + N +K S+ HV+FL+YQL
Sbjct: 76 LKHENV---IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
L + Y+HS GI HR + PSNV + + C
Sbjct: 133 LRGLKYIHSAGIIHRDLKPSNVAVNEDC 160
>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif
Length = 604
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVSSSL 1515
++AG +A +WI G + R+F+ +G + + AH Y+ +A P ++S S
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 1516 DKTLRIWDLRRNWPSQPTVFKGH 1538
D T+++W+ NW + T F+GH
Sbjct: 118 DLTVKLWNWENNWALEQT-FEGH 139
>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6
pdb|2YNO|B Chain B, Yeast Betaprime Cop 1-304h6
Length = 310
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVSSSL 1515
++AG +A +WI G + R+F+ +G + + AH Y+ +A P ++S S
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 1516 DKTLRIWDLRRNWPSQPTVFKGH 1538
D T+++W+ NW + T F+GH
Sbjct: 118 DLTVKLWNWENNWALEQT-FEGH 139
>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif
Length = 304
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVSSSL 1515
++AG +A +WI G + R+F+ +G + + AH Y+ +A P ++S S
Sbjct: 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD 117
Query: 1516 DKTLRIWDLRRNWPSQPTVFKGH 1538
D T+++W+ NW + T F+GH
Sbjct: 118 DLTVKLWNWENNWALEQT-FEGH 139
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFS-PNALKSEW----HVRFLMYQLL 228
RH NV + +L+ S L + Y ++++++ LKS+ H+ + +YQ+L
Sbjct: 98 FRHENVIGIRDILRASTLEAM---RDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQIL 154
Query: 229 SAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
+ Y+HS + HR + PSN+L+ +C L ICD G IAD
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLINTTC--DLKICD---FGLARIAD 195
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 222 SKGYTK--SIDIWSVGCILAEMLSNRPIF 248
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 191 LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+L
Sbjct: 134 LVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 192
Query: 251 LTDSCWSWLYICD 263
L D + L +CD
Sbjct: 193 L-DPDTAVLKLCD 204
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 187
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 188 LL-DPDTAVLKLCD 200
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 191 LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+L
Sbjct: 132 LVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 190
Query: 251 LTDSCWSWLYICD 263
L D + L +CD
Sbjct: 191 L-DPDTAVLKLCD 202
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 187
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 188 LL-DPDTAVLKLCD 200
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 191 LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+L
Sbjct: 175 LVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 233
Query: 251 LTDSCWSWLYICD 263
L D + L +CD
Sbjct: 234 L-DPDTAVLKLCD 245
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 165
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 166 LL-DPDTAVLKLCD 178
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP--NALKSEW----HVRFLMYQL 227
L+H NV +GLL TS+ + L L + N +KS+ HV+FL+YQL
Sbjct: 84 LKHENV---IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL 140
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
L + Y+HS GI HR + PSNV + + S L I D
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNED--SELRILD 174
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 123 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 181
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 182 LL-DPDTAVLKLCD 194
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSG---------LITSVIPKTPYT----LENILQFSPNA 213
E + ++HPNV + ++G L+ +P+T Y + Q P
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML 141
Query: 214 LKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
L ++ MYQLL ++AY+HS+GI HR + P N+LL
Sbjct: 142 L-----IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 114 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 172
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 173 LL-DPDTAVLKLCD 185
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 165
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 166 LL-DPDTAVLKLCD 178
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 103 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 161
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 162 LL-DPDTAVLKLCD 174
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 100 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 158
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 159 LL-DPDTAVLKLCD 171
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 108 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 166
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 167 LL-DPDTAVLKLCD 179
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 99 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 157
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 158 LL-DPDTAVLKLCD 170
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP--NALK----SEWHVRFLMYQL 227
L+H NV +GLL TS+ + L L + N +K S+ HV+FL+YQL
Sbjct: 84 LKHENV---IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 140
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
L + Y+HS GI HR + PSNV + + S L I D
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNVAVNED--SELRILD 174
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 96 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 154
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 155 LL-DPDTAVLKLCD 167
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P+T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 139
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 183
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 210 SKGYTK--SIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 131
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 175
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 202 SKGYTK--SIDIWSVGCILAEMLSNRPIF 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 190 GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249
L+ +P T Y + + L +V+ MYQL ++AY+HS GI HR + P N+
Sbjct: 95 NLVLDYVPATVYRVARHYSRAKQTLPV-IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL 153
Query: 250 LLTDSCWSWLYICD 263
LL D + L +CD
Sbjct: 154 LL-DPDTAVLKLCD 166
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 133
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 177
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 204 SKGYTK--SIDIWSVGCILAEMLSNRPIF 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 129
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 173
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 200 SKGYTK--SIDIWSVGCILAEMLSNRPIF 226
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HVR+ +YQLL + Y+HS + HR + PSN+L+ ++C
Sbjct: 160 HVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 196
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 131
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 175
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 202 SKGYTK--SIDIWSVGCILAEMLSNRPIF 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HVR+ +YQLL + Y+HS + HR + PSN+L+ ++C
Sbjct: 159 HVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 195
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 136
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 180
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 207 SKGYTK--SIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 137
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 181
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 208 SKGYTK--SIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 128
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 172
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 199 SKGYTK--SIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 135
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 179
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 206 SKGYTK--SIDIWSVGCILAEMLSNRPIF 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 135
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 179
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 206 SKGYTK--SIDIWSVGCILAEMLSNRPIF 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 129
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 173
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 200 SKGYTK--SIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 135
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 179
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 206 SKGYTK--SIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 136
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 180
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 207 SKGYTK--SIDIWSVGCILAEMLSNRPIF 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 173 CLRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
RH N+ AP + +K ++ ++ Y L S + H+ + +
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 132
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
YQ+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 177
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 204 SKGYTK--SIDIWSVGCILAEMLSNRPIF 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 151
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 195
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 222 SKGYTK--SIDIWSVGCILAEMLSNRPIF 248
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NVL+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSND------HICYFLY 135
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL +C L ICD G +AD
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICD---FGLARVAD 179
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 206 SKGYTK--SIDIWSVGCILAEMLSNRPIF 232
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADW 275
+E H++ L+Y LL + Y+HS GI HR + P+N L+ C + +CD G D+
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC--SVKVCD---FGLARTVDY 208
Query: 276 -----CTIPTSP 282
+P SP
Sbjct: 209 PENGNSQLPISP 220
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+++ +RF MY++L A+ Y HS+GI HR V P NV++
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 174 LRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 230
+RH NV +L + +T T P+ ++ + + E ++FL+YQ+L
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 231 IAYLHSLGIAHRSVCPSNVLLTDSC 255
+ Y+H+ GI HR + P N+ + + C
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDC 165
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
H ++++YQL+ I YLHS G+ HR + PSN+LL C
Sbjct: 110 HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAEC 146
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 187 KTSGLITSVIPKTPYT-LENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245
KT L+ I T + L IL +++ +RF MY+LL A+ Y HS GI HR V
Sbjct: 108 KTPALVFEYINNTDFKQLYQIL--------TDFDIRFYMYELLKALDYCHSKGIMHRDVK 159
Query: 246 PSNVLL 251
P NV++
Sbjct: 160 PHNVMI 165
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 187 KTSGLITSVIPKTPYT-LENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245
KT L+ I T + L IL +++ +RF MY+LL A+ Y HS GI HR V
Sbjct: 113 KTPALVFEYINNTDFKQLYQIL--------TDFDIRFYMYELLKALDYCHSKGIMHRDVK 164
Query: 246 PSNVLL 251
P NV++
Sbjct: 165 PHNVMI 170
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 143 LIEGKASGQESKNFLRLIGVPSFDESSVP-----------GCLRHPNVAPVLGLLKTSGL 191
L+E ++SG E R+I + D S VP L HPN+ + + +
Sbjct: 40 LVEERSSGLE-----RVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN 94
Query: 192 ITSVIP--KTPYTLENIL--QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247
+ V+ + LE I+ Q AL SE +V LM Q+++A+AY HS + H+ + P
Sbjct: 95 MYIVMETCEGGELLERIVSAQARGKAL-SEGYVAELMKQMMNALAYFHSQHVVHKDLKPE 153
Query: 248 NVLLTDS 254
N+L D+
Sbjct: 154 NILFQDT 160
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K L+T ++ Y L S + H+ + +Y
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND------HICYFLY 151
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL + L ICD G +AD
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTT--XDLKICD---FGLARVAD 195
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 222 SKGYTK--SIDIWSVGCILAEMLSNRPIF 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 19/110 (17%)
Query: 173 CLRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
RH N+ AP + +K ++ ++ Y L S + H+ + +
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFL 132
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
YQ+L + Y+HS + HR + PSN+LL + S L ICD G +AD
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTT--SDLKICD---FGLARVAD 177
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 204 SKGYTK--SIDIWSVGCILAEMLSNRPIF 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
LRH N+ +L + K V +T+ + L+ PN L + ++L +Q+++ I +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYL-FQIINGIGF 139
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
HS I HR + P N+L++ S + +CD
Sbjct: 140 CHSHNIIHRDIKPENILVSQS--GVVKLCD 167
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C L I D+ L
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--ELKILDRGL 171
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-------SEWHVRFLMYQ 226
L+H V+GLL +S+ + Y ++ F L+ SE +++L+YQ
Sbjct: 95 LKHMQHENVIGLLDVFTPASSL--RNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQ 152
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L + Y+HS G+ HR + P N+ + + C
Sbjct: 153 MLKGLKYIHSAGVVHRDLKPGNLAVNEDC 181
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 173
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 174
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 125 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 161
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 138
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 140
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 141 DYCHSQGIMHRDVKPHNVMI 160
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 139
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI 159
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G+PS E S+ L HPN+ ++ ++ + +T V L+ +L + L+
Sbjct: 61 GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS- 119
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
++ +YQLL +A+ H I HR + P N+L+
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
Score = 30.0 bits (66), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 705
SK +S S DI+SIGC+ AE+ +PLF ++
Sbjct: 194 SKKYS--TSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 164
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 136 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 172
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G+PS E S+ L HPN+ ++ ++ + +T V L+ +L + L+
Sbjct: 61 GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS- 119
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
++ +YQLL +A+ H I HR + P N+L+
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
Score = 30.0 bits (66), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 705
SK +S S DI+SIGC+ AE+ +PLF ++
Sbjct: 194 SKKYS--TSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 155 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 191
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 169
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 181
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-------SEWHVRFLMYQ 226
L+H V+GLL +S+ + Y ++ F L+ SE +++L+YQ
Sbjct: 77 LKHMQHENVIGLLDVFTPASSL--RNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQ 134
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L + Y+HS G+ HR + P N+ + + C
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAVNEDC 163
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 182
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 162
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 159
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 167
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 124 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 160
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 159
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 160 DYCHSQGIMHRDVKPHNVMI 179
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex
pdb|2OVQ|B Chain B, Structure Of The Skp1-Fbw7-Cyclinedegc Complex
pdb|2OVR|B Chain B, Structure Of The Skp1-Fbw7-Cyclinedegn Complex
Length = 445
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 39/242 (16%)
Query: 1313 GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH++ V C+ RI S D TL VW++ TGK L
Sbjct: 116 GHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIIS 174
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+TD+ + + I + + C+H E +R+V G + +LR DI GQ L
Sbjct: 175 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCL 232
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW---------------------- 1468
H+ +G + V + G + W
Sbjct: 233 HVL------MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 286
Query: 1469 -----IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWD 1523
+ +G R++DV +GN I + H + + +D++LVS + D T++IWD
Sbjct: 287 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWD 345
Query: 1524 LR 1525
++
Sbjct: 346 IK 347
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 62/296 (20%)
Query: 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAE 1353
T++ W C+ YGH V C+ R+ S D TL VW+ +TG+ L V
Sbjct: 180 TLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG 237
Query: 1354 QXXXXXXXXXXXXXXXKINTDQVGMLNSNTLSSG---ILSTAFDGNLYTCLH----HIEC 1406
+ + + + SG + +D TCLH H
Sbjct: 238 H----------------VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 281
Query: 1407 VERL-------VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1459
V L V G + S+R D+ G +H T G SL S
Sbjct: 282 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH------TLTGHQSLTS------------ 323
Query: 1460 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA---HDGYVTKLAAPEDHLLVSSSLD 1516
G + + +G + +++D+++G + + + H VT L ++ +++SS D
Sbjct: 324 -GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-FVITSSDD 381
Query: 1517 KTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADED 1572
T+++WDL+ + V +G SG VW I SN K+ + S++ E+
Sbjct: 382 GTVKLWDLKTGEFIRNLVTL--ESGGSGGVVWR---IRASNTKLVCAVGSRNGTEE 432
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 168
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 69 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 127
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 128 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 162
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 129
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 164
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 71 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 129
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 164
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 122
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 157
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 121
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 166
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 201
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 64 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 122
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 157
>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|D Chain D, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|G Chain G, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|H Chain H, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|K Chain K, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|L Chain L, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|O Chain O, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|P Chain P, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|S Chain S, Paf-Ah Holoenzyme: Lis1ALFA2
pdb|1VYH|T Chain T, Paf-Ah Holoenzyme: Lis1ALFA2
Length = 410
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 90/239 (37%), Gaps = 52/239 (21%)
Query: 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAE 1353
T++ W+ C+ +GH+ V+ + ++ + I AS D T+ +W QTG + F
Sbjct: 173 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 1354 QXXXXXXXXXXXXXXXKINTDQVGML-----NSNTLSSGILSTA-FDGNLYTCLHHIECV 1407
+ +Q G L N T+ +++T L H +EC+
Sbjct: 233 HREWVRM----------VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282
Query: 1408 ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1467
W E S S A GSE ++G
Sbjct: 283 S------------------------WAPE------SSYSSISEATGSETKKSG---KPGP 309
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK-LAAPEDHLLVSSSLDKTLRIWDLR 1525
++ +G +++DV +G + + HD +V L ++S + DKTLR+WD +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 98/280 (35%), Gaps = 42/280 (15%)
Query: 1284 VFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWN 1341
VF+ + T++ W+ + GH + V DI S +ASC D T+ +W+
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178
Query: 1342 SQTGKLLSVFAEQXXXXXXXXXXXXXXXKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1401
Q + + ++ + + + +G F G
Sbjct: 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG------ 232
Query: 1402 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGG 1461
H E V R+V +G+L + Q + +W V A C +E +
Sbjct: 233 -HREWV-RMVRPNQDGTL-IASCSNDQTVRVW------------VVATKECKAELREHRH 277
Query: 1462 AVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRI 1521
V SW S S G TK + L+S S DKT+++
Sbjct: 278 VVECISWAPESSYS---------------SISEATGSETKKSGKPGPFLLSGSRDKTIKM 322
Query: 1522 WDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK 1559
WD+ V GH N + G F G+ ++S +++K
Sbjct: 323 WDVSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDK 360
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 166
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 201
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHE-RM 126
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 161
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 675 TFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVY-----LENGDLPGVMEELPSHTRIL 729
+S+ C D+FS G +L E+ RR FD I + + NG P +++ LP L
Sbjct: 180 NYSEKC--DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 237
Query: 730 VEACITKDWTRRPSAKSLLE-----SPYFPSTVKSSYLFVAPLQLIARHG------SRLQ 778
+ C +KD ++RPS + +++ YFP + PLQ +H R++
Sbjct: 238 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE-------PLQYPCQHSLPPGEDGRVE 290
Query: 779 YAANFAKL 786
+FA+
Sbjct: 291 PYVDFAEF 298
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 675 TFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVY-----LENGDLPGVMEELPSHTRIL 729
+S+ C D+FS G +L E+ RR FD I + + NG P +++ LP L
Sbjct: 179 NYSEKC--DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 236
Query: 730 VEACITKDWTRRPSAKSLLE-----SPYFPSTVKSSYLFVAPLQLIARHG------SRLQ 778
+ C +KD ++RPS + +++ YFP + PLQ +H R++
Sbjct: 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE-------PLQYPCQHSLPPGEDGRVE 289
Query: 779 YAANFAKLGAL 789
+FA+ L
Sbjct: 290 PYVDFAEFYRL 300
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 131
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL + L ICD G +AD
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTT--XDLKICD---FGLARVAD 175
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 202 SKGYTK--SIDIWSVGCILAEMLSNRPIF 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 135
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL + L ICD G +AD
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTT--XDLKICD---FGLARVAD 179
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 206 SKGYTK--SIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 131
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL + L ICD G +AD
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTT--XDLKICD---FGLARVAD 175
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 202 SKGYTK--SIDIWSVGCILAEMLSNRPIF 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 19/109 (17%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 135
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274
Q+L + Y+HS + HR + PSN+LL + L ICD G +AD
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTT--XDLKICD---FGLARVAD 179
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 206 SKGYTK--SIDIWSVGCILAEMLSNRPIF 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 21/100 (21%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---------NALK-SEWHVRFL 223
LRHPN+ ++ T P L I++++ NA + SE RF
Sbjct: 73 LRHPNIVRFKEVILT-----------PTHLAIIMEYASGGELYERICNAGRFSEDEARFF 121
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
QLLS ++Y HS+ I HR + N LL S L ICD
Sbjct: 122 FQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICD 161
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
LRH ++ + +L+T+ I V+ P S + L SE R + Q++SA+AY
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRL-SEEETRVVFRQIVSAVAY 123
Query: 234 LHSLGIAHRSVCPSNVLLTD 253
+HS G AHR + P N+L +
Sbjct: 124 VHSQGYAHRDLKPENLLFDE 143
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 166 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
+E +V ++HPN+ + + ++ G + +I + E + +E L++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVL 250
Q+L A+ YLH LGI HR + P N+L
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 166 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
+E +V ++HPN+ + + ++ G + +I + E + +E L++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVL 250
Q+L A+ YLH LGI HR + P N+L
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 138
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 138
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 138
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 138
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 138
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.5 bits (101), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Query: 177 PNVAPVLGLL-----KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 231
PN+ +L ++ KT LI + T + + P +++ +R+ +Y+LL A+
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-----LYPTL--TDYDIRYYIYELLKAL 139
Query: 232 AYLHSLGIAHRSVCPSNVLL 251
Y HS GI HR V P NV++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI 159
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 166 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
+E +V ++HPN+ + + ++ G + +I + E + +E L++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVL 250
Q+L A+ YLH LGI HR + P N+L
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 166 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
+E +V ++HPN+ + + ++ G + +I + E + +E L++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLY-LIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVL 250
Q+L A+ YLH LGI HR + P N+L
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLL 148
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 71 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 129
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 164
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 64 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 122
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 157
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G+PS E S+ L+H N+ + ++ T + V L+ +L L+S
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
FL+ QLL+ IAY H + HR + P N+L+
Sbjct: 102 AKSFLL-QLLNGIAYCHDRRVLHRDLKPQNLLIN 134
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G+PS E S+ L+H N+ + ++ T + V L+ +L L+S
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
FL+ QLL+ IAY H + HR + P N+L+
Sbjct: 102 AKSFLL-QLLNGIAYCHDRRVLHRDLKPQNLLIN 134
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G+PS E S+ L+H N+ + ++ T + V L+ +L L+S
Sbjct: 42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT 101
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
FL+ QLL+ IAY H + HR + P N+L+
Sbjct: 102 AKSFLL-QLLNGIAYCHDRRVLHRDLKPQNLLIN 134
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 72 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 130
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 131 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 165
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 75 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 133
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 134 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 168
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+ +YQL A+ ++HSLGI HR + P N LL +S + L +CD
Sbjct: 143 ISIYIYQLFRAVGFIHSLGICHRDIKPQN-LLVNSKDNTLKLCD 185
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 163 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK-SEWHV 220
P +E ++ L+H N+ LG +G I + + P +L +L+ LK +E +
Sbjct: 65 PLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI 124
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD----KPLVGFNSIADWC 276
F Q+L + YLH I HR + NVL+ ++ L I D K L G N +
Sbjct: 125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETF 183
Query: 277 T 277
T
Sbjct: 184 T 184
>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN
ALLOSTERIC Inhibitor Scf-I2
pdb|3MKS|D Chain D, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN
ALLOSTERIC Inhibitor Scf-I2
pdb|3V7D|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Psic1 Peptide Complex
pdb|3V7D|D Chain D, Crystal Structure Of Scskp1-Sccdc4-Psic1 Peptide Complex
Length = 464
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1467 SWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRR 1526
+++ G R++D + + HDG V L +LVS S D+T+R+WD+++
Sbjct: 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192
Query: 1527 NWPSQPTVFKGHTNGI 1542
+ VF+GH + +
Sbjct: 193 GCCTH--VFEGHNSTV 206
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW 1528
I+A + + R++D+ +G ++ + + H V L D LVS++ D ++R WD ++
Sbjct: 326 ISASMDT-TIRIWDLENGELMYTLQGHTALV-GLLRLSDKFLVSAAADGSIRGWD-ANDY 382
Query: 1529 PSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSL 1565
+ + + + I+ F V ++S S N+ + +L
Sbjct: 383 SRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL 419
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S+ H+++ +YQ L A+ LH + HR + PSN+L+ +C L +CD
Sbjct: 110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCD 155
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 683 DIFSIGCLLAELHLRRPLF 701
D++S GC+LAEL LRRP+F
Sbjct: 205 DVWSCGCILAELFLRRPIF 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S+ H+++ +YQ L A+ LH + HR + PSN+L+ +C L +CD
Sbjct: 110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCD 155
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 653 EDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
+ G EY +R + + D++S GC+LAEL LRRP+F
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S+ H+++ +YQ L A+ LH + HR + PSN+L+ +C L +CD
Sbjct: 110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC--DLKVCD 155
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 683 DIFSIGCLLAELHLRRPLF 701
D++S GC+LAEL LRRP+F
Sbjct: 205 DVWSCGCILAELFLRRPIF 223
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 163 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK-SEWHV 220
P +E ++ L+H N+ LG +G I + + P +L +L+ LK +E +
Sbjct: 51 PLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI 110
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD----KPLVGFNSIADWC 276
F Q+L + YLH I HR + NVL+ ++ L I D K L G N +
Sbjct: 111 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETF 169
Query: 277 T 277
T
Sbjct: 170 T 170
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 166 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK--SEWHVRFL 223
+E + L+HP++ + + S + V+ N ++ N +K SE R
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMN--RYLKNRVKPFSENEARHF 117
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
M+Q+++ + YLHS GI HR + SN+LLT
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLT 146
>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex
pdb|1NEX|D Chain D, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex
Length = 464
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 1467 SWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRR 1526
+++ G R++D + + HDG V L +LVS S D+T+R+WD+++
Sbjct: 133 NYVITGADDKXIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192
Query: 1527 NWPSQPTVFKGHTNGI 1542
+ VF+GH + +
Sbjct: 193 GCCTH--VFEGHNSTV 206
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S H+++ MY +L + LH G+ HR + P N+LL D+ + + ICD
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN--NDITICD 177
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
S H+++ MY +L + LH G+ HR + P N+LL D+ + + ICD
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN--NDITICD 177
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 70 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHE-RM 128
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 164 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 220
++ E + C+ H N+ +L + KT V N+ Q L E +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHE-RM 121
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 152
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
SE ++M +L+SA++++H +G+ HR + P N+L TD
Sbjct: 104 SETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTD 141
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
HV+FL+YQ+L + Y+HS I HR + PSN+ + + S L I D
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED--SELKILD 170
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
HV+FL+YQ+L + Y+HS I HR + PSN+ + + S L I D
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED--SELKILD 168
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
HV+FL+YQ+L + Y+HS I HR + PSN+ + + S L I D
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED--SELKILD 174
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 17/93 (18%)
Query: 174 LRHPNVAPVLGLLKTSG-----------LITSVIPKTPYT---LENILQFSPNALKSEWH 219
L H N+ V +L SG + SV Y L N+L+ P E H
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLL---EEH 121
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
R MYQLL + Y+HS + HR + P+N+ +
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN 154
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
HV+FL+YQ+L + Y+HS I HR + PSN+ + +
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
HV+FL+YQ+L + Y+HS I HR + PSN+ + +
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
HV+FL+YQ+L + Y+HS I HR + PSN+ + +
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
HV+FL+YQ+L + Y+HS I HR + PSN+ + +
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSV---IPKTPYTLENILQFSPNALKSEWHVRFL 223
E+S+ L+HP++ +L + G++ V + E + + + SE
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
M Q+L A+ Y H I HR V P NVLL
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLA 164
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMYQLLSAIA 232
LRHPN+ ++ T + V+ + + + NA + SE RF QL+S ++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
Y H++ + HR + N LL S L ICD
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICD 160
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMYQLLSAIA 232
LRHPN+ ++ T + V+ + + + NA + SE RF QL+S ++
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
Y H++ + HR + N LL S L ICD
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPRLKICD 159
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.005, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+E HV+ ++Y LL ++H GI HR + P+N LL C + ICD
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDC--SVKICD 174
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 174 LRHPNV--------APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 225
RH N+ AP + +K ++ ++ Y L S + H+ + +Y
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND------HICYFLY 131
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
Q+L + Y+HS + HR + PSN+LL +
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTT 160
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Query: 673 SKTFSKDCSKDIFSIGCLLAELHLRRPLF 701
SK ++K S DI+S+GC+LAE+ RP+F
Sbjct: 202 SKGYTK--SIDIWSVGCILAEMLSNRPIF 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS--WLYICD 263
SE F+++ + + YLHS G+ HR + PSN+L D + L ICD
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICD 168
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS--WLYICD 263
SE F+++ + + YLHS G+ HR + PSN+L D + L ICD
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICD 168
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMYQLLSAIA 232
LRHPN+ ++ T + V+ + + + NA + SE RF QL+S ++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
Y H++ +AHR + N LL S L I D
Sbjct: 130 YAHAMQVAHRDLKLENTLLDGSPAPRLKIAD 160
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 161 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
G P + E S+ L+H N+ + ++ T +T V L+ L N +
Sbjct: 42 GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMH- 100
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+V+ ++QLL +AY H + HR + P N+L+ +
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE 135
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMY 225
E S LRHP++ + ++K+ I VI Y + + K SE R
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIE---YAGNELFDYIVQRDKMSEQEARRFFQ 120
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
Q++SA+ Y H I HR + P N+LL +
Sbjct: 121 QIISAVEYCHRHKIVHRDLKPENLLLDE 148
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMY 225
E S LRHP++ + ++K+ I VI Y + + K SE R
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIE---YAGNELFDYIVQRDKMSEQEARRFFQ 119
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
Q++SA+ Y H I HR + P N+LL +
Sbjct: 120 QIISAVEYCHRHKIVHRDLKPENLLLDE 147
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMY 225
E S LRHP++ + ++K+ I VI Y + + K SE R
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIE---YAGNELFDYIVQRDKMSEQEARRFFQ 114
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
Q++SA+ Y H I HR + P N+LL +
Sbjct: 115 QIISAVEYCHRHKIVHRDLKPENLLLDE 142
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDA 163
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMY 225
E S LRHP++ + ++K+ I VI Y + + K SE R
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIE---YAGNELFDYIVQRDKMSEQEARRFFQ 110
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
Q++SA+ Y H I HR + P N+LL +
Sbjct: 111 QIISAVEYCHRHKIVHRDLKPENLLLDE 138
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE R +M LL A+++LH+ I HR + P N+LL D+
Sbjct: 198 SEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN 236
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVL-LTDSCWSWLYICD 263
+M +LSA+AY H L +AHR + P N L LTDS S L + D
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 169
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVL-LTDSCWSWLYICD 263
+M +LSA+AY H L +AHR + P N L LTDS S L + D
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 152
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E + L H NV G + G I + + E + P+ E + +Q
Sbjct: 55 EICINAMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTD 253
L++ + YLH +GI HR + P N+LL +
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 174 LRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLL 228
HPNV + + S +T V L L P ++ +M+QLL
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 229 SAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ +LHS + HR + P N+L+T S
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSS 156
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 29/100 (29%)
Query: 683 DIFSIGCLLAELHLRRPLF----DSISLAVYLENGDLPG--------------------- 717
D++S+GC+ AE+ R+PLF D L L+ LPG
Sbjct: 201 DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 260
Query: 718 ----VMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+ ++ + L+ C+T + +R SA S L PYF
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 107 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 147
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 114 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 154
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 108 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+L+YQ+L I +LHS GI HR + PSN+++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 174 LRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLL 228
HPNV + + S +T V L L P ++ +M+QLL
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 229 SAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ +LHS + HR + P N+L+T S
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSS 156
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 29/100 (29%)
Query: 683 DIFSIGCLLAELHLRRPLF----DSISLAVYLENGDLPGVME-----ELPSHT------- 726
D++S+GC+ AE+ R+PLF D L L+ LPG + LP
Sbjct: 201 DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 260
Query: 727 -------------RILVEACITKDWTRRPSAKSLLESPYF 753
+ L+ C+T + +R SA S L PYF
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 167 ESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFL 223
E V CL HPNV +G+L K IT I TL I++ + V F
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG--TLRGIIKSMDSQYPWSQRVSFA 114
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ S +AYLHS+ I HR + N L+ ++
Sbjct: 115 K-DIASGMAYLHSMNIIHRDLNSHNCLVREN 144
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 233 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 273
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.3 bits (90), Expect = 0.017, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
+E H++ ++Y LL ++H GI HR + P+N LL C + +CD
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDC--SVKVCD 172
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 174 LRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLL 228
HPNV + + S +T V L L P ++ +M+QLL
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 229 SAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ +LHS + HR + P N+L+T S
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSS 156
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 29/100 (29%)
Query: 683 DIFSIGCLLAELHLRRPLF----DSISLAVYLENGDLPG--------------------- 717
D++S+GC+ AE+ R+PLF D L L+ LPG
Sbjct: 201 DLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 260
Query: 718 ----VMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 753
+ ++ + L+ C+T + +R SA S L PYF
Sbjct: 261 PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
N E + YQ+L A+ YLH GI HR + P NVLL+
Sbjct: 247 NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 287
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 93 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMYQLLSAIA 232
LRHPN+ ++ T + V+ + + + NA + SE RF QL+S ++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262
Y H++ + HR + N LL S L IC
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKIC 159
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALK-SEWHVRFLMYQLLSAIA 232
LRHPN+ ++ T + V+ + + + NA + SE RF QL+S ++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262
Y H++ + HR + N LL S L IC
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKIC 159
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 94 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ P+ E + +QL++ + YLH +GI HR + P N+LL +
Sbjct: 95 RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP 106
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.5 bits (88), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 214 LKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+ E++ L+ Q+ S +A+LHSL I HR + P N+L++ S
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 169
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.5 bits (88), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVR 221
DE +V L HPN+ + + L+ V E IL+ SE
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF----SEVDAA 107
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+M Q+LS YLH I HR + P N+LL
Sbjct: 108 VIMKQVLSGTTYLHKHNIVHRDLKPENLLL 137
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 214 LKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+ E++ L+ Q+ S +A+LHSL I HR + P N+L++ S
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 169
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 167
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 167
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 111 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 145
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 112 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 146
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 165
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 144
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L++ + S
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP 105
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 138
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ S + +E V+F + +L A+ +LHSLGI +R + P N+LL +
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 162
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 167
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 168
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 109 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 143
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
+ S + +E V+F + +L A+ +LHSLGI +R + P N+LL +
Sbjct: 117 RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 163
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 167
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 167
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 165
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 168
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 139 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 173
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 165
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 165
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 137 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 170
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 167
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.1 bits (87), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 214 LKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+ E++ L+ Q+ S +A+LHSL I HR + P N+L++ S
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L++ + S
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP 106
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 214 LKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+ E++ L+ Q+ S +A+LHSL I HR + P N+L++ S
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTS 151
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 116 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 150
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED 165
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260
HVR + YQL A+ +LH + H + P N+L +S + LY
Sbjct: 124 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY 165
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
RF +++SA+ YLH GI HR + P N+LL +
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE 164
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWH 219
+ E ++ L HPNV ++ +L ++ ++ + P +++ SE
Sbjct: 84 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP-----VMEVPTLKPLSEDQ 138
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF L+ I YLH I HR + PSN+L+ +
Sbjct: 139 ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED 173
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260
HVR + YQL A+ +LH + H + P N+L +S + LY
Sbjct: 156 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY 197
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260
HVR + YQL A+ +LH + H + P N+L +S + LY
Sbjct: 133 HVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLY 174
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E S LRHP++ + ++ T I VI L + + + E R Q
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG--RRFFQQ 116
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
++ AI Y H I HR + P N+LL D+
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDN 144
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE R +M LL I LH L I HR + P N+LL D
Sbjct: 109 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 147
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L++ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 136
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 37.7 bits (86), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE R +M LL I LH L I HR + P N+LL D
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP 104
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 137
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 37.7 bits (86), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE R +M LL I LH L I HR + P N+LL D
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.7 bits (86), Expect = 0.052, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ S + +E V+F + +L A+ +LHSLGI +R + P N+LL +
Sbjct: 116 RLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE 161
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP 106
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 139
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 37.7 bits (86), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L Q+L A++Y+HS GI HR++ P N+ + +S
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDES 152
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.4 bits (85), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSV---IPKTPYTLENILQFSPNALKSEWHVRFL 223
E+S+ L+HP++ +L + G++ V + E + + + SE
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
M Q+L A+ Y H I HR V P VLL
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLA 164
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 175 RHPNVAPVLGLLKTSGLITSV--IPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
+HPN+ + + + V + K L+ IL+ SE +++ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR---QKFFSEREASAVLFTITKTVE 130
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWS--WLYICD 263
YLH+ G+ HR + PSN+L D + + ICD
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICD 163
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.4 bits (85), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 137
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.4 bits (85), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 137
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 137
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.4 bits (85), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + +L+ S + I YT + + SE ++ Q+ S I
Sbjct: 78 LDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269
Y+H I HR + P N+LL S CD ++ F
Sbjct: 136 YMHKHNIVHRDLKPENILLE----SKEKDCDIKIIDF 168
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSV---IPKTPYTLENILQFSPNALKSEWHVRFL 223
E+S+ L+HP++ +L + G++ V + E + + + SE
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
M Q+L A+ Y H I HR V P VLL
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLA 166
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.4 bits (85), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 45 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 104
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 137
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.4 bits (85), Expect = 0.078, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+M Q+LS I YLH I HR + P N+LL +
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLEN 181
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 106
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 105
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 138
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 107
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 140
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT--------DSCWSWLYICDKPLVGFNSIAD 274
L+ Q S +A+LHSL I HR + P N+L++ + S +C K VG +S +
Sbjct: 123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 275 WCTIP 279
+P
Sbjct: 183 RSGVP 187
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 726 TRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLF 763
R L+E I D +RPSAK +L+ P+F S K F
Sbjct: 260 ARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFF 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 106
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 43 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 135
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 105
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 138
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 173 CLRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
HPNV ++ + TS +T V L L +P ++ LM Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLT 252
L + +LH+ I HR + P N+L+T
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVT 146
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 46 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 105
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI 138
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.0 bits (84), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 47 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP 106
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 139
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.0 bits (84), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 48 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 107
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 140
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 175 RHPNVAPVLGLLKTSGLITSV--IPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 232
+HPN+ + + + V + K L+ IL+ SE +++ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVE 130
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWS--WLYICD 263
YLH+ G+ HR + PSN+L D + + ICD
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICD 163
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 173 CLRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
HPNV ++ + TS +T V L L +P ++ LM Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLT 252
L + +LH+ I HR + P N+L+T
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVT 146
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.0 bits (84), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 110
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 51 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 110
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +A+ HS + HR + P N+L+
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 143
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 173 CLRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
HPNV ++ + TS +T V L L +P ++ LM Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLT 252
L + +LH+ I HR + P N+L+T
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVT 146
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.0 bits (84), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 165 FDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVR 221
DE +V L HPN+ + + L+ V E IL+ SE
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF----SEVDAA 124
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+M Q+LS YLH I HR + P N+LL
Sbjct: 125 VIMKQVLSGTTYLHKHNIVHRDLKPENLLL 154
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 37.0 bits (84), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 109 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 148
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 109 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 148
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.0 bits (84), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E RF ++ SA+ YLHSL I +R + P N+LL
Sbjct: 138 EPRARFYAAEIASALGYLHSLNIVYRDLKPENILL 172
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.0 bits (84), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 208 QFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ S + +E V+F + +L + +LHSLGI +R + P N+LL +
Sbjct: 120 RLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDE 165
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G S + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKKVIHRDIKPENLLL 141
>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A
6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating
80s Ribosome
pdb|3O2Z|T Chain T, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
pdb|3O30|T Chain T, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
pdb|3U5C|GG Chain g, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
pdb|3U5G|GG Chain g, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
Length = 319
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 1246 VGGLKDES--PWKIKASILSSIRAHHGALRSVAV------GQDECTVFTAGIGPGFKGTV 1297
+ G +D++ W IK L+++ H+ + V V D T+ +AG V
Sbjct: 123 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK----MV 178
Query: 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1354
+ W L + + + GH +N + IAS DG + +WN K + + Q
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 237
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC-----VSGYYGHEEVV 1318
++ H+G + S+A + + + T+ W+LT + V + GH +V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLL---LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 1319 NDICVLSSSGRIA---SCDGTLHVWNSQTGKLLSVF 1351
D C L++ G A S D TL +W+ TG+ F
Sbjct: 69 QD-CTLTADGAYALSASWDKTLRLWDVATGETYQRF 103
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 1493 RAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLR---RNWPSQPTVFKGHTN 1540
H+G+VT LA A + +LL+S+S DKTL W L + + FKGH++
Sbjct: 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 66
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L Q+L A++Y+HS GI HR + P N+ + +S
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDES 152
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L Q+L A++Y+HS GI HR + P N+ + +S
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDES 152
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 173 CLRHPNVAPVLGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
HPNV ++ + TS +T V L L +P ++ LM Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLT 252
L + +LH+ I HR + P N+L+T
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVT 154
>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a
Cryo-em Map Of Yeast 80s Ribosome
Length = 314
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 1246 VGGLKDES--PWKIKASILSSIRAHHGALRSVAV------GQDECTVFTAGIGPGFKGTV 1297
+ G +D++ W IK L+++ H+ + V V D T+ +AG V
Sbjct: 123 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK----MV 178
Query: 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1354
+ W L + + + GH +N + IAS DG + +WN K + + Q
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 237
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC-----VSGYYGHEEVV 1318
++ H+G + S+A + + + T+ W+LT + V + GH +V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLL---LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 1319 NDICVLSSSGRIA---SCDGTLHVWNSQTGKLLSVF 1351
D C L++ G A S D TL +W+ TG+ F
Sbjct: 69 QD-CTLTADGAYALSASWDKTLRLWDVATGETYQRF 103
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 1493 RAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLR---RNWPSQPTVFKGHTN 1540
H+G+VT LA A + +LL+S+S DKTL W L + + FKGH++
Sbjct: 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 66
>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 313
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 1246 VGGLKDES--PWKIKASILSSIRAHHGALRSVAV------GQDECTVFTAGIGPGFKGTV 1297
+ G +D++ W IK L+++ H+ + V V D T+ +AG V
Sbjct: 117 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK----MV 172
Query: 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1354
+ W L + + + GH +N + IAS DG + +WN K + + Q
Sbjct: 173 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 231
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC-----VSGYYGHEEVV 1318
++ H+G + S+A + + + T+ W+LT + V + GH +V
Sbjct: 6 TLEGHNGWVTSLATSAGQPNLL---LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 62
Query: 1319 NDICVLSSSGRIA---SCDGTLHVWNSQTGKLLSVF 1351
D C L++ G A S D TL +W+ TG+ F
Sbjct: 63 QD-CTLTADGAYALSASWDKTLRLWDVATGETYQRF 97
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 1493 RAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLR---RNWPSQPTVFKGHTN 1540
H+G+VT LA A + +LL+S+S DKTL W L + + FKGH++
Sbjct: 8 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 60
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 116 SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPG 172
+Y + EEL S + CV + L K + +++F +L E+ +
Sbjct: 30 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKL-----EREARICR 83
Query: 173 CLRHPNVAP-------------VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWH 219
L+HPN+ V L+ L ++ + Y SE
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--------------SEAD 129
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ Q+L +IAY HS GI HR++ P N+LL
Sbjct: 130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 162
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 213 ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+L E FL Q+L+ + YLHSL IAH + P N++L D
Sbjct: 110 SLTEEEATEFLK-QILNGVYYLHSLQIAHFDLKPENIMLLD 149
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
L+ Q+L A+ YLH +GI HR + P N+L
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLL 152
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 195
>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs
Protein Complex
Length = 351
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 1474 SSGQ--CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1530
SSG C L+D+ +G ++ H G V L+ AP+ L VS + D + ++WD+R
Sbjct: 171 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 230
Query: 1531 QPTVFKGHTNGISGF 1545
Q F GH + I+
Sbjct: 231 Q--TFTGHESDINAI 243
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI 1469
V G + S + D+ +G + G ++ ++AIC G A A+
Sbjct: 210 FVSGACDASAKLWDVREGMCRQTFTGHESD------INAICF-----FPNGNAFAT---- 254
Query: 1470 AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLR 1525
G CRLFD+R+ + ++ +HD + + + LL++ D +WD
Sbjct: 255 --GSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 311
Query: 1526 RNWPSQPTVFKGHTNGISGFSV 1547
+ + V GH N +S V
Sbjct: 312 K--ADRAGVLAGHDNRVSCLGV 331
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1465 SPSWIAAGLSSGQCRLFDV--RSGNVIASWR--AHDGYVTKLAAPEDHLLVSSSLDKTLR 1520
S +++A G C ++++ R GNV S H GY++ +D+ +V+SS D T
Sbjct: 119 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 178
Query: 1521 IWDL 1524
+WD+
Sbjct: 179 LWDI 182
>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P63
pdb|3RFG|B Chain B, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P63
Length = 319
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 1246 VGGLKDES--PWKIKASILSSIRAHHGALRSVAV------GQDECTVFTAGIGPGFKGTV 1297
+ G +D++ W IK L+++ H+ + V V D T+ +AG V
Sbjct: 123 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK----MV 178
Query: 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1354
+ W L + + + GH +N + IAS DG + +WN K + + Q
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 237
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC-----VSGYYGHEEVV 1318
++ H+G + S+A + + + T+ W+LT + V + GH +V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLL---LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 1319 NDICVLSSSGRIA---SCDGTLHVWNSQTGKLLSVF 1351
D C L++ G A S D TL +W+ TG+ F
Sbjct: 69 QD-CTLTADGAYALSASWDKTLRLWDVATGETYQRF 103
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 1493 RAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLR---RNWPSQPTVFKGHTN 1540
H+G+VT LA A + +LL+S+S DKTL W L + + FKGH++
Sbjct: 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 66
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 172 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L+HPN+ +L + + + V +T+ + L + E V+ + +Q L A+ +
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGV-PEHLVKSITWQTLQAVNF 117
Query: 234 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263
H HR V P N+L+T S + +CD
Sbjct: 118 CHKHNCIHRDVKPENILITKH--SVIKLCD 145
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ + +
Sbjct: 126 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGY 166
>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The
Gt-Beta-Gamma Subunits
pdb|2TRC|B Chain B, PhosducinTRANSDUCIN BETA-Gamma Complex
pdb|1B9X|A Chain A, Structural Analysis Of Phosducin And Its Phosphorylation-
Regulated Interaction With Transducin
pdb|1B9Y|A Chain A, Structural Analysis Of Phosducin And Its Phosphorylation-
Regulated Interaction With Transducin Beta-Gamma
Length = 340
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 1474 SSGQ--CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1530
SSG C L+D+ +G ++ H G V L+ AP+ L VS + D + ++WD+R
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219
Query: 1531 QPTVFKGHTNGISGF 1545
Q F GH + I+
Sbjct: 220 Q--TFTGHESDINAI 232
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI 1469
V G + S + D+ +G T G S ++AIC G A A+
Sbjct: 199 FVSGACDASAKLWDVREGM------CRQTFTGHESDINAICF-----FPNGNAFAT---- 243
Query: 1470 AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLR 1525
G CRLFD+R+ + ++ +HD + + + LL++ D +WD
Sbjct: 244 --GSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 1526 RNWPSQPTVFKGHTNGISGFSV 1547
+ + V GH N +S V
Sbjct: 301 K--ADRAGVLAGHDNRVSCLGV 320
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1465 SPSWIAAGLSSGQCRLFDV--RSGNVIASWR--AHDGYVTKLAAPEDHLLVSSSLDKTLR 1520
S +++A G C ++++ R GNV S H GY++ +D+ +V+SS D T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 1521 IWDL 1524
+WD+
Sbjct: 168 LWDI 171
>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1
Gamma_2 With Gdp Bound
pdb|1GP2|B Chain B, G Protein Heterotrimer Gi_alpha_1 Beta_1 Gamma_2 With Gdp
Bound
pdb|1TBG|A Chain A, Beta-Gamma Dimer Of The Heterotrimeric G-Protein Transducin
pdb|1TBG|B Chain B, Beta-Gamma Dimer Of The Heterotrimeric G-Protein Transducin
pdb|1TBG|C Chain C, Beta-Gamma Dimer Of The Heterotrimeric G-Protein Transducin
pdb|1TBG|D Chain D, Beta-Gamma Dimer Of The Heterotrimeric G-Protein Transducin
pdb|1OMW|B Chain B, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And
Gamma 2 Subunits
pdb|1XHM|A Chain A, The Crystal Structure Of A Biologically Active Peptide
(Sigk) Bound To A G Protein Beta:gamma Heterodimer
pdb|3CIK|B Chain B, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3KRW|B Chain B, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|B Chain B, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
pdb|3AH8|B Chain B, Structure Of Heterotrimeric G Protein Galpha-Q Beta Gamma In
Complex With An Inhibitor Ym-254890
pdb|3PSC|B Chain B, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|B Chain B, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|B Chain B, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
pdb|3UZS|B Chain B, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3V5W|B Chain B, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 340
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 1474 SSGQ--CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1530
SSG C L+D+ +G ++ H G V L+ AP+ L VS + D + ++WD+R
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219
Query: 1531 QPTVFKGHTNGISGF 1545
Q F GH + I+
Sbjct: 220 Q--TFTGHESDINAI 232
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI 1469
V G + S + D+ +G T G S ++AIC G A A+
Sbjct: 199 FVSGACDASAKLWDVREGM------CRQTFTGHESDINAICF-----FPNGNAFAT---- 243
Query: 1470 AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLR 1525
G CRLFD+R+ + ++ +HD + + + LL++ D +WD
Sbjct: 244 --GSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 1526 RNWPSQPTVFKGHTNGISGFSV 1547
+ + V GH N +S V
Sbjct: 301 K--ADRAGVLAGHDNRVSCLGV 320
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1465 SPSWIAAGLSSGQCRLFDV--RSGNVIASWR--AHDGYVTKLAAPEDHLLVSSSLDKTLR 1520
S +++A G C ++++ R GNV S H GY++ +D+ +V+SS D T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 1521 IWDL 1524
+WD+
Sbjct: 168 LWDI 171
>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
pdb|3RFH|B Chain B, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
pdb|3RFH|C Chain C, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
pdb|3RFH|D Chain D, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
Length = 319
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 14/119 (11%)
Query: 1246 VGGLKDES--PWKIKASILSSIRAHHGALRSVAV------GQDECTVFTAGIGPGFKGTV 1297
+ G +D++ W IK L+++ H+ + V V D T+ +AG V
Sbjct: 123 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK----MV 178
Query: 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1354
+ W L + + + GH +N + IAS DG + +WN K + + Q
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ 237
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC-----VSGYYGHEEVV 1318
++ H+G + S+A + + + T+ W+LT + V + GH +V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLL---LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 1319 NDICVLSSSGRIA---SCDGTLHVWNSQTGKLLSVF 1351
D C L++ G A S D TL +W+ TG+ F
Sbjct: 69 QD-CTLTADGAYALSASWDKTLRLWDVATGETYQRF 103
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 1493 RAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLR---RNWPSQPTVFKGHTN 1540
H+G+VT LA A + +LL+S+S DKTL W L + + FKGH++
Sbjct: 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 66
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 212 NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
N LK EW + ++ ++L +++LH + HR + NVLLT++
Sbjct: 124 NTLKEEW-IAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA 166
>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma
Length = 340
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 1474 SSGQ--CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1530
SSG C L+D+ +G ++ H G V L+ AP+ L VS + D + ++WD+R
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219
Query: 1531 QPTVFKGHTNGISGF 1545
Q F GH + I+
Sbjct: 220 Q--TFTGHESDINAI 232
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI 1469
V G + S + D+ +G T G S ++AIC G A A+
Sbjct: 199 FVSGACDASAKLWDVREGM------CRQTFTGHESDINAICF-----FPNGNAFAT---- 243
Query: 1470 AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLR 1525
G CRLFD+R+ + ++ +HD + + + LL++ D +WD
Sbjct: 244 --GSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 1526 RNWPSQPTVFKGHTNGISGFSV 1547
+ + V GH N +S V
Sbjct: 301 K--ADRAGVLAGHDNRVSCLGV 320
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1465 SPSWIAAGLSSGQCRLFDV--RSGNVIASWR--AHDGYVTKLAAPEDHLLVSSSLDKTLR 1520
S +++A G C ++++ R GNV S H GY++ +D+ +V+SS D T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 1521 IWDL 1524
+WD+
Sbjct: 168 LWDI 171
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 668 QKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPL---FDSISLAVYLENGDLPGVMEELPS 724
Q+S+Y D DI+S+G EL P + + + + P ++ +
Sbjct: 193 QQSAY------DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTK 246
Query: 725 HTRILVEACITKDWTRRPSAKSLLESPYF-PSTVKSSYL 762
+ ++AC+ KD + RP+AK LL+ + ++ K+SYL
Sbjct: 247 SFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYL 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In
Complex With Galpha-q And Gbetagamma Subunits
Length = 340
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 1474 SSGQ--CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1530
SSG C L+D+ +G ++ H G V L+ AP+ L VS + D + ++WD+R
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219
Query: 1531 QPTVFKGHTNGISGF 1545
Q F GH + I+
Sbjct: 220 Q--TFTGHESDINAI 232
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 24/142 (16%)
Query: 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI 1469
V G + S + D+ +G T G S ++AIC G A A+
Sbjct: 199 FVSGACDASAKLWDVREGM------CRQTFTGHESDINAICF-----FPNGNAFAT---- 243
Query: 1470 AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLR 1525
G CRLFD+R+ + ++ +HD + + + LL++ D +WD
Sbjct: 244 --GSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 1526 RNWPSQPTVFKGHTNGISGFSV 1547
+ + V GH N +S V
Sbjct: 301 K--ADRAGVLAGHDNRVSCLGV 320
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 1465 SPSWIAAGLSSGQCRLFDV--RSGNVIASWR--AHDGYVTKLAAPEDHLLVSSSLDKTLR 1520
S +++A G C ++++ R GNV S H GY++ +D+ +V+SS D T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 1521 IWDL 1524
+WD+
Sbjct: 168 LWDI 171
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 116 SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPG 172
+Y + EEL S + CV + L K + +++F +L E+ +
Sbjct: 6 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-----EARICR 59
Query: 173 CLRHPNVAP-------------VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWH 219
L+HPN+ V L+ L ++ + Y SE
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--------------SEAD 105
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ Q+L +IAY HS GI HR++ P N+LL
Sbjct: 106 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 138
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CWSWLYICD----KPLVGFNSIADWCT 277
+M + AI YLHS+ IAHR V P N+L T + L + D K NS+ + C
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY 179
Query: 278 IP 279
P
Sbjct: 180 TP 181
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 157
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 127 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 156
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 126 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 155
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 121 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 150
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 136 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 116 SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPG 172
+Y + EEL S + CV + L K + +++F +L E+ +
Sbjct: 7 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-----EARICR 60
Query: 173 CLRHPNVAP-------------VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWH 219
L+HPN+ V L+ L ++ + Y SE
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--------------SEAD 106
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ Q+L +IAY HS GI HR++ P N+LL
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 139
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 210 SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
S + ++ E + +M Q+ SA+ YLH+ GI HR + P N L +
Sbjct: 160 SLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + AI YLHS+ IAHR V P N+L T
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYT 149
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 683 DIFSIGCLLAELHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWT 739
DI+++GC+L EL + F++ S L + + +G P V R LV ++
Sbjct: 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266
Query: 740 RRPSAKSLLESPYFPSTVKSSYLFVAPLQLIA 771
RPS S+LE + ++ F++P QLIA
Sbjct: 267 DRPSVNSILEKGFIAKRIEK---FLSP-QLIA 294
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 128
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 129 TYITELANALSYCHSKRVIHRDIKPENLLL 158
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L HPN+ + + +T I+ V+ E + SE + Q+L A+AY
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGG-ELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 234 LHSLGIAHRSVCPSNVL 250
LH GI HR + P N+L
Sbjct: 164 LHENGIVHRDLKPENLL 180
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
V+ L+YQ+L I YLH+ + HR + P+N+L+
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILV 161
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + +L+ S + I YT + + SE ++ Q+ S I
Sbjct: 78 LDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269
Y+H I HR + P N+LL CD ++ F
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKD----CDIKIIDF 168
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 116 SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPG 172
+Y + EEL S + CV + L K + +++F +L E+ +
Sbjct: 7 NYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE-----REARICR 60
Query: 173 CLRHPNVAP-------------VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWH 219
L+HPN+ V L+ L ++ + Y SE
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--------------SEAD 106
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ Q+L +IAY HS GI HR++ P N+LL
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 139
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD------EQRTA 116
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLL 146
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLT 252
QL+ + YLHS GI H+ + P N+LLT
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLT 143
>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex
pdb|4AEZ|D Chain D, Crystal Structure Of Mitotic Checkpoint Complex
pdb|4AEZ|G Chain G, Crystal Structure Of Mitotic Checkpoint Complex
Length = 401
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 21/122 (17%)
Query: 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI 1469
L VG+GNG + D+ KL G +G S + + GS
Sbjct: 149 LSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSR-------------- 194
Query: 1470 AAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKLAAPEDHL-LVSSSLDKTLRIWDLRRN 1527
SG DVR N I + + H V LA D L L S D ++IWD R +
Sbjct: 195 -----SGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249
Query: 1528 WP 1529
P
Sbjct: 250 IP 251
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + +L+ S + I YT + + SE ++ Q+ S I
Sbjct: 78 LDHPNIMKLFEILEDSS--SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 233 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269
Y+H I HR + P N+LL CD ++ F
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKD----CDIKIIDF 168
>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
pdb|1ERJ|B Chain B, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
pdb|1ERJ|C Chain C, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
Length = 393
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVSSSLDKTLRIWDLR 1525
++A G R++D+ + ++ + H+ + L P LVS S D+T+RIWDLR
Sbjct: 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 195
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWD---- 1523
+ +G R++D+R+G + DG T +P D + + SLD+ +R+WD
Sbjct: 180 LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG 239
Query: 1524 -LRRNWPSQPTVFKGHTNGISG--FSVWGQDVISIS 1556
L S+ GH + + F+ GQ V+S S
Sbjct: 240 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E S+ L HPN+ +L ++ T + V L+ + S
Sbjct: 44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 103
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ ++QLL +++ HS + HR + P N+L+
Sbjct: 104 LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLI 136
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 137
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLL 167
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 112
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLL 142
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD------EQRTA 116
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLL 146
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 112
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLL 142
>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In
Complex With Initiation Factor 1. This File Contains The
40s Subunit And Initiation Factor For Molecule 1
pdb|2XZN|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In
Complex With Initiation Factor 1. This File Contains The
40s Subunit And Initiation Factor For Molecule 2
Length = 343
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 1494 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLR 1525
H+ +V+ LA + E+ +SSS DKTLR+WDLR
Sbjct: 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLR 106
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 116
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLL 146
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 113
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLL 143
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 114
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLL 144
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 112
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 113 TYITELANALSYCHSKRVIHRDIKPENLLL 142
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 116
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLL 146
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 200
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 200
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 113
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 114 TYITELANALSYCHSKRVIHRDIKPENLLL 143
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 116
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLL 146
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 114
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLL 144
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 20/148 (13%)
Query: 116 SYSIFEELASNFLSGCLEDCVLGS------LNLLIEGKASGQESKNFLRLIGVPSFDESS 169
Y +FEEL S + CV + ++ K S ++ + R E+
Sbjct: 32 DYQLFEELGKGAFS-VVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER--------EAR 82
Query: 170 VPGCLRHPNVAPVLGLLKTSGLITSVIPKTP--YTLENILQFSPNALKSEWHVRFLMYQL 227
+ L+HPN+ + + G V E+I+ SE ++Q+
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIHQI 139
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
L ++ ++H I HR + P N+LL C
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKC 167
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
L HPN+ +L I+ V LE I++ + L H++ M L + Y
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS-HIKAYMLMTLQGLEY 127
Query: 234 LHSLGIAHRSVCPSNVLLTDS 254
LH I HR + P+N+LL ++
Sbjct: 128 LHQHWILHRDLKPNNLLLDEN 148
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 132 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 172
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 137
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 138 TYITELANALSYCHSKRVIHRDIKPENLLL 167
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 114
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLL 144
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 114
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLL 144
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 125 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 165
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 114
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLL 144
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 114
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLL 144
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 230 AIAYLHSLGIAHRSVCPSNVLLT 252
AI YLHS+ IAHR V P N+L T
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYT 195
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 115
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLL 145
>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg
Particle Of The Proteasome
Length = 417
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 1405 ECVERLVVGIGNGSLRFIDINQGQKL-----HLWRGEPTELGFPSLVSAICACGSEKMQA 1459
E E +V +GN R +D +G HL++ G L + I GS+ ++
Sbjct: 38 EIKEHKIVVLGNS--RGVDAGKGNTFEKVGSHLYKARLD--GHDFLFNTIIRDGSKMLKR 93
Query: 1460 GGAVASPSW------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVS 1512
A + G + G ++ D +AH +TKL P L+S
Sbjct: 94 ADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALIS 153
Query: 1513 SSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW--GQDVISIS 1556
SS D L+IW ++ S P GH ++ ++ G++V+S S
Sbjct: 154 SSQDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDRGRNVLSAS 197
Score = 30.8 bits (68), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQ 1354
GH V DI ++ + AS DGT+ +W TG + F +
Sbjct: 176 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRK 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 108
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 109 TYITELANALSYCHSKRVIHRDIKPENLLL 138
>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1.
pdb|3FRX|B Chain B, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1.
pdb|3FRX|C Chain C, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1.
pdb|3FRX|D Chain D, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1
Length = 319
Score = 35.4 bits (80), Expect = 0.27, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 1246 VGGLKDES--PWKIKASILSSIRAHHGALRSVAV------GQDECTVFTAGIGPGFKGTV 1297
+ G +D++ W IK L+++ H+ + V V D T+ +AG V
Sbjct: 123 ISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG----NDKXV 178
Query: 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1354
+ W L + + + GH +N + IAS DG + +WN K + Q
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTLSAQ 237
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 1494 AHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLR---RNWPSQPTVFKGHTN 1540
H+G+VT LA A + +LL+S+S DKTL W L + + FKGH++
Sbjct: 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH 66
Score = 31.2 bits (69), Expect = 5.1, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN-----CVSGYYGHEEVV 1318
++ H+G + S+A + + + T+ W+LT + V + GH +V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLL---LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV 68
Query: 1319 NDICVLSSSGRIA---SCDGTLHVWNSQTGKLLSVF 1351
D C L++ G A S D TL +W+ TG+ F
Sbjct: 69 QD-CTLTADGAYALSASWDKTLRLWDVATGETYQRF 103
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 111
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 112 TYITELANALSYCHSKRVIHRDIKPENLLL 141
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD------EQRTA 115
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLL 145
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP + +LG G + +I P + + + +E ++ + Q+L A+ +LH
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134
Query: 236 SLGIAHRSVCPSNVLLT 252
S I HR + NVL+T
Sbjct: 135 SKRIIHRDLKAGNVLMT 151
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL-LTDSCWSWLYICD 263
+E ++ Q+LSA+ YLH GI HR + P N+L LT S + I D
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD 152
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD------EQRTA 110
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 111 TYITELANALSYCHSKRVIHRDIKPENLLL 140
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 679 DCSKDIFSIGCLLAELHLRR-------PLFDSISLAVYLENGDLPGV-----MEELPSHT 726
D D++S+G L EL R +FD ++ V GD P + E PS
Sbjct: 207 DVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV---KGDPPQLSNSEEREFSPSFI 263
Query: 727 RILVEACITKDWTRRPSAKSLLESPYF 753
V C+TKD ++RP K LL+ P+
Sbjct: 264 N-FVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP + +LG G + +I P + + + +E ++ + Q+L A+ +LH
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 126
Query: 236 SLGIAHRSVCPSNVLLT 252
S I HR + NVL+T
Sbjct: 127 SKRIIHRDLKAGNVLMT 143
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSWLYICDKPLVGFNSIADWCTIPTS 281
++ + +A+ +LH+ GIAHR + P N+L + S + ICD L + + CT T+
Sbjct: 116 VVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITT 175
Query: 282 PMI 284
P +
Sbjct: 176 PEL 178
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 180
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVR 221
+E +V L HPN+ + + L+ E I + N E
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN----EVDAA 139
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
++ Q+LS + YLH I HR + P N+LL
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLL 169
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 179
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-----TLENILQFSPNALKSEWHVR 221
E + LRHPN+ + G + + ++ P L+ + +F E
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD------EQRTA 115
Query: 222 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+ +L +A++Y HS + HR + P N+LL
Sbjct: 116 TYITELANALSYCHSKRVIHRDIKPENLLL 145
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 179
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 179
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY 180
>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14
pdb|3VL1|B Chain B, Crystal Structure Of Yeast Rpn14
Length = 420
Score = 35.0 bits (79), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 1405 ECVERLVVGIGNGSLRFIDINQGQKL-----HLWRGEPTELGFPSLVSAICACGSEKMQA 1459
E E +V +GN R +D +G HL++ G L + I GS+ ++
Sbjct: 41 EIKEHKIVVLGNS--RGVDAGKGNTFEKVGSHLYKARLD--GHDFLFNTIIRDGSKMLKR 96
Query: 1460 GGAVASPSW------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA-PEDHLLVS 1512
A + G + G ++ D +AH +TKL P L+S
Sbjct: 97 ADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALIS 156
Query: 1513 SSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW--GQDVISIS 1556
SS D L+IW ++ S P GH ++ ++ G++V+S S
Sbjct: 157 SSQDMQLKIWSVKDG--SNPRTLIGHRATVTDIAIIDRGRNVLSAS 200
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQ 1354
GH V DI ++ + AS DGT+ +W TG + F +
Sbjct: 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRK 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.0 bits (79), Expect = 0.33, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
SE H RF Q++ YLHSL + +R + P N+L+
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a)
Length = 315
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+AA + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 40 WLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 100 G--KCLKTLKGHSN 111
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 63/232 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 66 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 107
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 145
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 146 ------KTLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 188
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540
+ D +P +++++LD TL++WD + + GH N
Sbjct: 189 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKN 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
SE H RF Q++ YLHSL + +R + P N+++ +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGY 179
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
SE + Q+L A+ + H +G+ HR + P N+LL C
Sbjct: 101 SEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKC 140
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQF-----SPNA 213
G PS E S+ L+H N+ + ++ T +T V L+ + +P
Sbjct: 45 GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG 104
Query: 214 LKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
L+ V++ +QLL +A+ H I HR + P N+L+
Sbjct: 105 LELNL-VKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
+E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 139 AEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS
CRYSTAL Structure
pdb|2PBI|D Chain D, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS
CRYSTAL Structure
Length = 354
Score = 35.0 bits (79), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 1476 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APED--HLLVSSSLDKTLRIWDLRRNWPSQP 1532
G C L+DV SG ++ S+ H V L AP + + VS DK +WD+R Q
Sbjct: 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235
Query: 1533 TVFKGHTNGIS 1543
F+ H + ++
Sbjct: 236 --FETHESDVN 244
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 34/170 (20%)
Query: 1409 RLVVGIGNGSLRFIDINQGQKLHLWRGE----------PTELGFPSLVSAICACGSE--K 1456
+++ G+G+ D+ GQ L + G P+E G + VS C +
Sbjct: 168 QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG-NTFVSGGCDKKAMVWD 226
Query: 1457 MQAGGAVA----------------SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD---G 1497
M++G V S A+G CRL+D+R+ +A + G
Sbjct: 227 MRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286
Query: 1498 YVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSV 1547
+ + LL + D T+ +WD+ + S+ ++ GH N +S V
Sbjct: 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKG--SRVSILFGHENRVSTLRV 334
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + + G V YT + + SE ++ Q+LS I
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLV--GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 233 YLHSLGIAHRSVCPSNVLL 251
Y+H I HR + P N+LL
Sbjct: 165 YMHKNKIVHRDLKPENLLL 183
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + + G V YT + + SE ++ Q+LS I
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLV--GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 233 YLHSLGIAHRSVCPSNVLL 251
Y+H I HR + P N+LL
Sbjct: 164 YMHKNKIVHRDLKPENLLL 182
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + + G V YT + + SE ++ Q+LS I
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLV--GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 233 YLHSLGIAHRSVCPSNVLL 251
Y+H I HR + P N+LL
Sbjct: 141 YMHKNKIVHRDLKPENLLL 159
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255
RF + +++ AI +H LG HR + P N+LL D C
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVHRDIKPDNILL-DRC 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E + L+H N+ + +L + +T V L+ L E
Sbjct: 43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
V+ ++QLL + + HS + HR + P N+L+
Sbjct: 103 -VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 161 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVPS E + L+H N+ + +L + +T V L+ L E
Sbjct: 43 GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI 102
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
V+ ++QLL + + HS + HR + P N+L+
Sbjct: 103 -VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 22/145 (15%)
Query: 117 YSIFEELASNFLSGCLEDCVL------GSLNLLIEGKASGQESKNFLRLIGVPSFDESSV 170
Y +FEEL S + CV + ++ K S ++ + R E+ +
Sbjct: 24 YQLFEELGKGAFS-VVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER--------EARI 74
Query: 171 PGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
L+HPN+ + + G LI ++ E+I+ SE + Q+
Sbjct: 75 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE-LFEDIV---AREYYSEADASHCIQQI 130
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLT 252
L A+ + H +G+ HR + P N+LL
Sbjct: 131 LEAVLHCHQMGVVHRDLKPENLLLA 155
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264
VR + +QL A+ +LH + H + P N+L +S + Y +K
Sbjct: 139 VRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEK 183
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260
H+R + YQ+ ++ +LHS + H + P N+L S ++ Y
Sbjct: 119 HIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAY 160
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260
H+R + YQ+ ++ +LHS + H + P N+L S ++ Y
Sbjct: 119 HIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAY 160
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
+ H N+ VL + + G V+ K L+ + E ++ QL+SA+ Y
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 234 LHSLGIAHRSVCPSNVLLTDS 254
L I HR + N+++ +
Sbjct: 146 LRLKDIIHRDIKDENIVIAED 166
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKT--SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
E+ + L HP++ ++G+++ + +I + P L + L+ + N+LK V + +
Sbjct: 63 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYG--ELGHYLERNKNSLKVLTLVLYSL 120
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
Q+ A+AYL S+ HR + N+L+
Sbjct: 121 -QICKAMAYLESINCVHRDIAVRNILVA 147
>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
Site
pdb|2XL2|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
Site
pdb|2XL3|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3 Peptide
pdb|2XL3|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3 Peptide
Length = 334
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 126
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 164
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 165 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 207
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 265
Query: 1545 FSVWG 1549
FSV G
Sbjct: 266 FSVTG 270
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 119 G--KCLKTLKGHSN 130
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKT--SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
E+ + L HP++ ++G+++ + +I + P L + L+ + N+LK V + +
Sbjct: 59 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYG--ELGHYLERNKNSLKVLTLVLYSL 116
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
Q+ A+AYL S+ HR + N+L+
Sbjct: 117 -QICKAMAYLESINCVHRDIAVRNILVA 143
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 135 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 174
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSAIA 232
L HPN+ + + G V YT + + SE ++ Q+LS I
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLV--GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 233 YLHSLGIAHRSVCPSNVLL 251
Y+H I HR + P N+LL
Sbjct: 147 YMHKNKIVHRDLKPENLLL 165
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine
Apaf-1
Length = 1256
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 38/189 (20%)
Query: 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY----GHEE 1316
+ SS H A+R + D T+ I +Q W N +G Y H+E
Sbjct: 1002 VFSSGVGHKKAVRHIQFTADGKTL----ISSSEDSVIQVW-----NWQTGDYVFLQAHQE 1052
Query: 1317 VVNDICVLSSSGRIA-SCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXKINTDQ 1375
V D +L S ++ S DGT+ VWN TG++ F I++D
Sbjct: 1053 TVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT--------CHQGTVLSCAISSDA 1104
Query: 1376 VGMLNSNTLSSGILSTAFDGNLYTCLH----HIECVE---------RLVVGIGNGSLRFI 1422
++ S+ + + +L + LH H CV L G NG +R
Sbjct: 1105 TKF---SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1161
Query: 1423 DINQGQKLH 1431
+++ GQ LH
Sbjct: 1162 NVSDGQLLH 1170
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLR 1525
+A G + +L+D+ + H V +P+D LL S S D TLR+WD+R
Sbjct: 723 LATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR 780
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 1300 WELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1345
W+L + C + +GH VN +ASC DGTL +W+ ++
Sbjct: 735 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 782
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 34.3 bits (77), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K E + FL+ E++V ++HPN+ +LG+ V PY N+
Sbjct: 66 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYG--NL 115
Query: 207 LQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 116 LDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 166
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 161 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 200
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 34.3 bits (77), Expect = 0.57, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
SE H RF Q++ YLHSL + +R + P N+++
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.3 bits (77), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 141 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 180
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256
E H RF Q++ YLHSL + +R + P N+L+ +
Sbjct: 133 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 172
>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1
Length = 1249
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 38/189 (20%)
Query: 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY----GHEE 1316
+ SS H A+R + D T+ I +Q W N +G Y H+E
Sbjct: 995 VFSSGVGHKKAVRHIQFTADGKTL----ISSSEDSVIQVW-----NWQTGDYVFLQAHQE 1045
Query: 1317 VVNDICVLSSSGRIA-SCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXKINTDQ 1375
V D +L S ++ S DGT+ VWN TG++ F I++D
Sbjct: 1046 TVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT--------CHQGTVLSCAISSDA 1097
Query: 1376 VGMLNSNTLSSGILSTAFDGNLYTCLH----HIECVE---------RLVVGIGNGSLRFI 1422
++ S+ + + +L + LH H CV L G NG +R
Sbjct: 1098 TKF---SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154
Query: 1423 DINQGQKLH 1431
+++ GQ LH
Sbjct: 1155 NVSDGQLLH 1163
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 1504 APEDHLLVSSSLDKTLRIWDLR 1525
+P+D LL S S D TLR+WD+R
Sbjct: 752 SPDDELLASCSADGTLRLWDVR 773
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 1300 WELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1345
W+L + C + +GH VN +ASC DGTL +W+ ++
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 34.3 bits (77), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLM 224
E ++ +RHPN+ + + + + ++ + F +L + +FL
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFLK 136
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
Q+L + YLHS IAH + P N++L D
Sbjct: 137 -QILDGVHYLHSKRIAHFDLKPENIMLLDK 165
>pdb|2GNQ|A Chain A, Structure Of Wdr5
Length = 336
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 87 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 128
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 129 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 166
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 167 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 209
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 210 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 267
Query: 1545 FSVWG 1549
FSV G
Sbjct: 268 FSVTG 272
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 61 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 120
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 121 G--KCLKTLKGHSN 132
>pdb|1UUY|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
Molybdenum And Copper Metabolism
Length = 167
Score = 34.3 bits (77), Expect = 0.63, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 981 VQSWSALSLIDCLMTLDGLVAFLPREVV---VKELIEDRSCLHVMVLMHTNLEITVLQVA 1037
+Q WS + +D ++TL G F PR+V K++IE + + V+M +L+IT +
Sbjct: 63 LQKWSDVDEMDLILTLGG-TGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAML 121
Query: 1038 ASTLMAI 1044
A + I
Sbjct: 122 ARSAAGI 128
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLM 224
E ++ +RHPN+ + + + + ++ + F +L + +FL
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFLK 122
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
Q+L + YLHS IAH + P N++L D
Sbjct: 123 -QILDGVHYLHSKRIAHFDLKPENIMLLDK 151
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKT--SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
E+ + L HP++ ++G+++ + +I + P L + L+ + N+LK V + +
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYG--ELGHYLERNKNSLKVLTLVLYSL 132
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
Q+ A+AYL S+ HR + N+L+
Sbjct: 133 -QICKAMAYLESINCVHRDIAVRNILVA 159
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ Q+ A+ +LHS G+ HR + PSN+ T
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFT 198
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 117 YSIFEELASNFLSGCLEDCVL------GSLNLLIEGKASGQESKNFLRLIGVPSFDESSV 170
Y +FEEL S + CV + ++ K S ++ + R E+ +
Sbjct: 13 YQLFEELGKGAFS-VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER--------EARI 63
Query: 171 PGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 227
L+HPN+ + + G LI ++ E+I+ SE + Q+
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-FEDIV---AREYYSEADASHCIQQI 119
Query: 228 LSAIAYLHSLGIAHRSVCPSNVLLT 252
L A+ + H +G+ HR++ P N+LL
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLA 144
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLM 224
E ++ +RHPN+ + + + + ++ + F +L + +FL
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFLK 115
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
Q+L + YLHS IAH + P N++L D
Sbjct: 116 -QILDGVHYLHSKRIAHFDLKPENIMLLDK 144
>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction
Length = 318
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 69 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 110
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 111 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 148
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 149 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 191
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 192 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 249
Query: 1545 FSVWG 1549
FSV G
Sbjct: 250 FSVTG 254
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 43 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 102
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 103 G--KCLKTLKGHSN 114
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E R L Q+LSA+ Y H + HR + P NVLL
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+ Q+ A+ +LHS G+ HR + PSN+ T
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated
Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
pdb|2G99|B Chain B, Structural Basis For The Specific Recognition Of Methylated
Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
Length = 308
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 59 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 100
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 138
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 139 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 181
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 182 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 239
Query: 1545 FSVWG 1549
FSV G
Sbjct: 240 FSVTG 244
Score = 33.5 bits (75), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 33 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 92
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 93 G--KCLKTLKGHSN 104
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E R L Q+LSA+ Y H + HR + P NVLL
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.9 bits (76), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + +AI +LHS IAHR V P N+L T
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 220 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
VR M L A+ +H GI HR V PSN L
Sbjct: 119 VREYMLNLFKALKRIHQFGIVHRDVKPSNFL 149
>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana
Length = 694
Score = 33.9 bits (76), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 1493 RAHDGYVTKLAAPEDH--LLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQ 1550
RAH VT +A P D+ ++VS+S DK++ +W L ++ + ++G S + +
Sbjct: 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKD----DKAYGVAQRRLTGHSHFVE 434
Query: 1551 DVISISNNKIGLSSLSKSADEDGQHRL 1577
DV+ S+ + L S DG+ RL
Sbjct: 435 DVVLSSDGQFAL-----SGSWDGELRL 456
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+M + +AI +LHS IAHR V P N+L T
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure
pdb|2YMU|B Chain B, Structure Of A Highly Repetitive Propeller Structure
Length = 577
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+D + S+S DKT+++W+ RN
Sbjct: 400 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN--RN 456
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
T GH++ + G FS GQ + S S++K
Sbjct: 457 GQLLQT-LTGHSSSVRGVAFSPDGQTIASASDDKT 490
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+ + S+S DKT+++W+ RN
Sbjct: 441 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN--RN 497
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
T GH++ + G FS GQ + S S++K
Sbjct: 498 GQLLQT-LTGHSSSVRGVAFSPDGQTIASASDDKT 531
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+ + S+S DKT+++W+ RN
Sbjct: 277 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--RN 333
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
GH++ + G FS GQ + S S++K
Sbjct: 334 -GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 367
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+ + S+S DKT+++W+ RN
Sbjct: 31 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--RN 87
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
T GH++ + G FS GQ + S S++K
Sbjct: 88 GQLLQT-LTGHSSSVRGVAFSPDGQTIASASDDKT 121
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+ + S+S DKT+++W+ RN
Sbjct: 154 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--RN 210
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
T GH++ + G FS GQ + S S++K
Sbjct: 211 GQLLQT-LTGHSSSVRGVAFSPDGQTIASASDDKT 244
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+ + S+S DKT+++W+ RN
Sbjct: 72 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN--RN 128
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
T GH++ + G FS GQ + S S++K
Sbjct: 129 GQLLQT-LTGHSSSVWGVAFSPDGQTIASASDDKT 162
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A P+ + S+S DKT+++W+ RN
Sbjct: 236 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWN--RN 292
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKIGLSSLSKSADEDGQH 1575
T GH++ + G FS GQ + S S++K K + +GQH
Sbjct: 293 GQLLQT-LTGHSSSVWGVAFSPDGQTIASASDDKT-----VKLWNRNGQH 336
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527
IA+ +L++ R+G ++ + H V +A +P+ + S+S DKT+++W+ RN
Sbjct: 195 IASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN--RN 251
Query: 1528 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNKI 1560
T GH++ ++G F GQ + S S++K
Sbjct: 252 GQLLQT-LTGHSSSVNGVAFRPDGQTIASASDDKT 285
>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f)
Length = 315
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 40 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 100 G--KCLKTLKGHSN 111
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 63/232 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 66 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 107
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 145
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 146 ------KTLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 188
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540
+ D +P +++++LD TL++WD + + GH N
Sbjct: 189 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKN 238
>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y)
Length = 315
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 40 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 100 G--KCLKTLKGHSN 111
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 63/232 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 66 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 107
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 145
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 146 ------KTLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 188
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540
+ D +P +++++LD TL++WD + + GH N
Sbjct: 189 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKN 238
>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 40 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 100 G--KCLKTLKGHSN 111
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWD 1523
I +G R++DV++G + + AH V+ + D L+VSSS D RIWD
Sbjct: 125 IVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 180
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 90/245 (36%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 66 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 107
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G L
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGMCL 145
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 146 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 188
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD L++WD + + GH N +
Sbjct: 189 TLIDDDNPPVSFVKFSPNGKYILAATLDNDLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 246
Query: 1545 FSVWG 1549
FSV G
Sbjct: 247 FSVTG 251
>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H68|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6K|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6K|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6N|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6N|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6Q|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6Q|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|3EG6|A Chain A, Structure Of Wdr5 Bound To Mll1 Peptide
pdb|4ERQ|A Chain A, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|B Chain B, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|C Chain C, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERY|A Chain A, X-Ray Structure Of Wdr5-Mll3 Win Motif Peptide Binary
Complex
pdb|4ERZ|A Chain A, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|B Chain B, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|C Chain C, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ES0|A Chain A, X-Ray Structure Of Wdr5-Setd1b Win Motif Peptide Binary
Complex
pdb|4ESG|A Chain A, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4ESG|B Chain B, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4EWR|A Chain A, X-Ray Structure Of Wdr5-Setd1a Win Motif Peptide Binary
Complex
Length = 312
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 63 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 104
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 105 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 142
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 143 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 185
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 186 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 243
Query: 1545 FSVWG 1549
FSV G
Sbjct: 244 FSVTG 248
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 37 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 97 G--KCLKTLKGHSN 108
>pdb|2H9L|A Chain A, Wdr5delta23
pdb|2H9P|A Chain A, Wdr5 In Complex With Trimethylated H3k4 Peptide
Length = 329
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 54 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 113
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 114 G--KCLKTLKGHSN 125
Score = 33.5 bits (75), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 80 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 121
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 122 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 159
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 160 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 202
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 203 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 260
Query: 1545 FSVWG 1549
FSV G
Sbjct: 261 FSVTG 265
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++ A+ +HS+G HR V P N+LL S
Sbjct: 171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 204
>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1
Angstrom
pdb|2CO0|C Chain C, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 33.9 bits (76), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 40 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 99
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 100 G--KCLKTLKGHSN 111
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 91/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 66 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 107
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G L
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGMCL 145
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 146 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 188
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 189 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 246
Query: 1545 FSVWG 1549
FSV G
Sbjct: 247 FSVTG 251
>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated
Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
Length = 311
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 36 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 95
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 96 G--KCLKTLKGHSN 107
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 63/232 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 62 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 103
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 104 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 141
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 142 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 184
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540
+ D +P +++++LD TL++WD + + GH N
Sbjct: 185 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKN 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++ A+ +HS+G HR V P N+LL S
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 209
>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound
pdb|3SMR|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With Compound
pdb|3SMR|C Chain C, Crystal Structure Of Human Wd Repeat Domain 5 With Compound
pdb|3SMR|D Chain D, Crystal Structure Of Human Wd Repeat Domain 5 With Compound
pdb|3UR4|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound
pdb|3UR4|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With Compound
pdb|4IA9|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 In Complex
With 2-
Chloro-4-Fluoro-3-Methyl-N-[2-(4-Methylpiperazin-1-Yl)-5-
Nitrophenyl]benzamide
Length = 312
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 37 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 97 G--KCLKTLKGHSN 108
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 63 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 104
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 105 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 142
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 143 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 185
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 186 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 243
Query: 1545 FSVWG 1549
FSV G
Sbjct: 244 FSVTG 248
>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone
Mark That Supports Euchromatin Maintenance
Length = 318
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 43 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 102
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 103 G--KCLKTLKGHSN 114
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 69 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 110
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 111 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 148
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 149 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 191
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 192 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 249
Query: 1545 FSVWG 1549
FSV G
Sbjct: 250 FSVTG 254
>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9M|C Chain C, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9N|A Chain A, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2H9N|C Chain C, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2O9K|A Chain A, Wdr5 In Complex With Dimethylated H3k4 Peptide
pdb|2O9K|C Chain C, Wdr5 In Complex With Dimethylated H3k4 Peptide
Length = 313
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 38 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 97
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 98 G--KCLKTLKGHSN 109
Score = 33.5 bits (75), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 64 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 105
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 106 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 143
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 144 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 186
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 187 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 244
Query: 1545 FSVWG 1549
FSV G
Sbjct: 245 FSVTG 249
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
RHP++ + ++ T I V+ E N E R L Q+LS + Y
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGG-ELFDYICKNGRLDEKESRRLFQQILSGVDY 131
Query: 234 LHSLGIAHRSVCPSNVLL 251
H + HR + P NVLL
Sbjct: 132 CHRHMVVHRDLKPENVLL 149
>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3PSL|B Chain B, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3UVK|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll2
pdb|3UVL|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll3
pdb|3UVM|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll4
pdb|3UVN|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVN|C Chain C, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVO|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1b
Length = 318
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 43 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 102
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 103 G--KCLKTLKGHSN 114
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 63/232 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 69 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 110
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 111 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 148
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 149 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 191
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540
+ D +P +++++LD TL++WD + + GH N
Sbjct: 192 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKN 241
>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX
pdb|2H14|A Chain A, Crystal Of Wdr5 (Apo-Form)
pdb|3P4F|A Chain A, Structural And Biochemical Insights Into Mll1 Core Complex
Assembly And Regulation
Length = 317
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRR 1526
W+A+ + +++ G + H ++ +A D +LLVS+S DKTL+IWD+
Sbjct: 42 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 101
Query: 1527 NWPSQPTVFKGHTN 1540
KGH+N
Sbjct: 102 G--KCLKTLKGHSN 113
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 92/245 (37%), Gaps = 67/245 (27%)
Query: 1313 GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXK 1370
GH+ ++D+ S S + AS D TL +W+ +GK L K
Sbjct: 68 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL------------------K 109
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+++ V N N S+ I+S +FD S+R D+ G+ L
Sbjct: 110 GHSNYVFCCNFNPQSNLIVSGSFDE----------------------SVRIWDVKTGKCL 147
Query: 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490
T VSA+ + G + S S+ G CR++D SG +
Sbjct: 148 K------TLPAHSDPVSAV-----HFNRDGSLIVSSSY------DGLCRIWDTASGQCLK 190
Query: 1491 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG----ISG 1544
+ D +P +++++LD TL++WD + + GH N +
Sbjct: 191 TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCLKTYTGHKNEKYCIFAN 248
Query: 1545 FSVWG 1549
FSV G
Sbjct: 249 FSVTG 253
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.5 bits (75), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
RF +++ A+ +HS+G HR V P N+LL S
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 33.5 bits (75), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K E + FL+ E++V ++HPN+ +LG+ +I Y N+
Sbjct: 48 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG--NL 97
Query: 207 LQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 98 LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 148
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + +I + E + E R
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLY-LIMEYASGGEVFDYLVAHGRMKEKEARSKF 120
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLL 147
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGRMKEKEARAKF 119
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + +I + E + E R
Sbjct: 59 FREVRIMKILNHPNIVKLFEVIETEKTLY-LIMEYASGGEVFDYLVAHGRMKEKEARSKF 117
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLL 144
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 224 MYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253
+ ++L A++YLHS+G+ + + P N++LT+
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTE 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGRMKEKEARAKF 120
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLL 147
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E H RF Q++ YLHSL + +R + P N+L+
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3KG6|A Chain A, Dehydratase Domain From Curf Module Of Curacin Polyketide
Synthase
pdb|3KG6|B Chain B, Dehydratase Domain From Curf Module Of Curacin Polyketide
Synthase
pdb|3KG6|C Chain C, Dehydratase Domain From Curf Module Of Curacin Polyketide
Synthase
pdb|3KG6|D Chain D, Dehydratase Domain From Curf Module Of Curacin Polyketide
Synthase
Length = 285
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 569 NVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKEFSSESFVGTISN 628
N LL E L +E+ F + SP Y NH + FG + P+ + E +
Sbjct: 2 NAHPLLGEKINLAGIEDQHRFQSYIGAESPGYLNHHQVFGKVLFPSTGY-LEIAASAGKS 60
Query: 629 PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSY 672
F + + V+SD+D +L+ L + + Q ++ + + +SY
Sbjct: 61 LFTSQEQVVVSDVD---ILQSLVIPETEIKTVQTVVSFAENNSY 101
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K E + FL+ E++V ++HPN+ +LG+ +I Y N+
Sbjct: 52 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG--NL 101
Query: 207 LQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 102 LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGRMKEKEARAKF 119
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGRMKEKEARAKF 119
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGFVHRDLAARNILI 180
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 12/103 (11%)
Query: 172 GCLRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQ--FSPNALKSEWHVRF 222
L HPN+ + T G + V+ P TL + + ++
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133
Query: 223 LMYQLLSAIAYLH--SLGIAHRSVCPSNVLLTDSCWSWLYICD 263
++QL+ +I LH S+ + HR + P NVL+ ++ + L +CD
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGT-LKLCD 175
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 67 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EXMENGSLDSFLRKHDAQFTVIQ 119
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 151
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGRMKEKEARAKF 119
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGRMKEKEARAKF 119
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EXMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGAVHRDLAARNILI 180
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE + Q+L + YLH+ IAH + P N++L D
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution
Of 2.45 Angstrom
pdb|4AOW|B Chain B, Crystal Structure Of The Human Rack1 Protein At A Resolution
Of 2.45 Angstrom
pdb|4AOW|C Chain C, Crystal Structure Of The Human Rack1 Protein At A Resolution
Of 2.45 Angstrom
Length = 340
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 12/76 (15%)
Query: 1493 RAHDGYVTKLAAPED--HLLVSSSLDKTLRIWDLRR---NWPSQPTVFKGHTNGISGFSV 1547
+ H+G+VT++A +++S+S DKT+ +W L R N+ +GH++ +S
Sbjct: 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS---- 90
Query: 1548 WGQDVISISNNKIGLS 1563
DV+ S+ + LS
Sbjct: 91 ---DVVISSDGQFALS 103
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 1296 TVQKWELTRINCVSG-----YYGHEEVVNDICVLSSSGRIA---SCDGTLHVWNSQTGKL 1347
T+ W+LTR G GH V+D+ V+SS G+ A S DGTL +W+ TG
Sbjct: 62 TIIMWKLTRDETNYGIPQRALRGHSHFVSDV-VISSDGQFALSGSWDGTLRLWDLTTGTT 120
Query: 1348 LSVFA 1352
F
Sbjct: 121 TRRFV 125
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 1493 RAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI--SGFSVWG 1549
R H +V+ + D +S S D TLR+WDL + F GHT + FS
Sbjct: 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDN 140
Query: 1550 QDVISISNNK 1559
+ ++S S +K
Sbjct: 141 RQIVSGSRDK 150
Score = 30.4 bits (67), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1471 AGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHL-LVSSSLDKTLRIWD 1523
+G G RL+D+ +G + H V +A D+ +VS S DKT+++W+
Sbjct: 103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EXMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + V+ E + E R
Sbjct: 54 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG-EVFDYLVAHGWMKEKEARAKF 112
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLL 139
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE + Q+L + YLH+ IAH + P N++L D
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE + Q+L + YLH+ IAH + P N++L D
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
>pdb|3IZA|A Chain A, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|B Chain B, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|C Chain C, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|D Chain D, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|E Chain E, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|F Chain F, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|G Chain G, Structure Of An Apoptosome-Procaspase-9 Card Complex
Length = 1263
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 1257 IKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEE 1316
+ I S H + + DE T+ I +Q W C+ GH+E
Sbjct: 997 VNNRIFQSRFQHKKTVWHIQFTADEKTL----ISSSDDAEIQVWNWQLDKCIF-LRGHQE 1051
Query: 1317 VVNDICVLSSSGRIA-SCDGTLHVWNSQTG 1345
V D +L +S ++ S DGT+ VWN TG
Sbjct: 1052 TVKDFRLLKNSRLLSWSFDGTVKVWNIITG 1081
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 1300 WELTRINCVSGYYGHEEVVNDICVLSSSGR-IASC--DGTLHVWNSQTG 1345
W+L + C + +GH VN C S + +ASC DGTL +W++ +
Sbjct: 734 WDLNQKECRNTMFGHTNSVNH-CRFSPDDKLLASCSADGTLKLWDATSA 781
>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s
Complex Obtained By Docking Homology Models Of The Rna
And Proteins Into An 8.7 A Cryo-Em Map
Length = 317
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 12/76 (15%)
Query: 1493 RAHDGYVTKLAAPED--HLLVSSSLDKTLRIWDLRR---NWPSQPTVFKGHTNGISGFSV 1547
+ H+G+VT++A +++S+S DKT+ +W L R N+ +GH++ +S
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS---- 67
Query: 1548 WGQDVISISNNKIGLS 1563
DV+ S+ + LS
Sbjct: 68 ---DVVISSDGQFALS 80
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 1296 TVQKWELTRINCVSG-----YYGHEEVVNDICVLSSSGRIA---SCDGTLHVWNSQTGKL 1347
T+ W+LTR G GH V+D+ V+SS G+ A S DGTL +W+ TG
Sbjct: 39 TIIMWKLTRDETNYGIPQRALRGHSHFVSDV-VISSDGQFALSGSWDGTLRLWDLTTGTT 97
Query: 1348 LSVF 1351
F
Sbjct: 98 TRRF 101
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1471 AGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHL-LVSSSLDKTLRIWD 1523
+G G RL+D+ +G + H V +A D+ +VS S DKT+++W+
Sbjct: 80 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 1493 RAHDGYVTKLAAPED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI--SGFSVWG 1549
R H +V+ + D +S S D TLR+WDL + F GHT + FS
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDN 117
Query: 1550 QDVISISNNK 1559
+ ++S S +K
Sbjct: 118 RQIVSGSRDK 127
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE + Q+L + YLH+ IAH + P N++L D
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE + Q+L + YLH+ IAH + P N++L D
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K E + FL+ E++V ++HPN+ +LG+ +I Y N+
Sbjct: 47 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG--NL 96
Query: 207 LQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 162 VPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVR 221
+ + E + L+H NV ++ + +T + + Y + + + L S V+
Sbjct: 62 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK 121
Query: 222 F-------LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
F +M LL+ + Y+H I HR + +NVL+T
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K E + FL+ E++V ++HPN+ +LG+ +I Y N+
Sbjct: 47 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG--NL 96
Query: 207 LQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
SE + Q+L + YLH+ IAH + P N++L D
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A
5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 380
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 1391 TAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1450
T G +C + + RL+ G G+ + D+ GQ++ ++ E FPS +A
Sbjct: 154 TGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE-----FPSGHTADV 208
Query: 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQC----RLFDVR-SGNVIASWRAHDGYVTKLA-A 1504
+++ S A SG C RL+D+R + + ++ H+G + +
Sbjct: 209 L----------SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF 258
Query: 1505 PEDHLLVSSSLDKTLRIWDLR 1525
P+ + S D T R++D+R
Sbjct: 259 PDGQRFGTGSDDGTCRLFDMR 279
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 67 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 119
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 120 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 151
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 84 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 136
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 137 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 168
>pdb|1O8N|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8N|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8N|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
Length = 167
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 981 VQSWSALSLIDCLMTLDGLVAFLPREVV---VKELIEDRSCLHVMVLMHTNLEIT 1032
+Q WS + +D ++TL G F PR+V K++IE + + V+M +L+IT
Sbjct: 63 LQKWSDVDEMDLILTLGG-AGFTPRDVTPEATKKVIERETPGLLFVMMQESLKIT 116
>pdb|1UUX|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
Molybdenum And Copper Metabolism
Length = 163
Score = 32.7 bits (73), Expect = 1.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 981 VQSWSALSLIDCLMTLDGLVAFLPREVV---VKELIEDRSCLHVMVLMHTNLEIT 1032
+Q WS + +D ++TL G F PR+V K++IE + + V+M +L+IT
Sbjct: 63 LQKWSDVDEMDLILTLGG-TGFTPRDVTPEATKKVIERETPGLLFVMMQESLKIT 116
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 206
K E + FL+ E++V ++HPN+ +LG+ +I Y N+
Sbjct: 45 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG--NL 94
Query: 207 LQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 73 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 131
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 132 SKRFVHRDIAARNVLVSSN 150
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 72 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 130
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 131 SKRFVHRDIAARNVLVSSN 149
>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|B Chain B, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|C Chain C, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|D Chain D, Crystal Structure Of The Wd Repeat-Containing Protein 61
Length = 321
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1526
++A+G G +FD+ +G ++ + H + L +P+ LLV++S D ++I+D++
Sbjct: 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 162 VPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVR 221
+ + E + L+H NV ++ + +T + + Y + + + L S V+
Sbjct: 62 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 222 F-------LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
F +M LL+ + Y+H I HR + +NVL+T
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 67 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 125
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 126 SKRFVHRDIAARNVLVSSN 144
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.7 bits (73), Expect = 1.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E H RF Q++ YLHSL + +R + P N+++
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.7 bits (73), Expect = 1.8, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E H RF Q++ YLHSL + +R + P N+++
Sbjct: 141 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 75 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 133
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 134 SKRFVHRDIAARNVLVSSN 152
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 96 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 148
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY---ICDKPLVGFNSIA 273
E H RF ++ A+ YLH GI +R + NVLL L +C + L ++ +
Sbjct: 152 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 211
Query: 274 DWCTIPT 280
+C P
Sbjct: 212 TFCGTPN 218
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 226
E+S+ G HPN+ ++ G++T P T E + S ++ + +F + Q
Sbjct: 94 EASIMGQFDHPNI------IRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDAQFTVIQ 146
Query: 227 LL-------SAIAYLHSLGIAHRSVCPSNVLL 251
L+ S + YL +G HR + N+L+
Sbjct: 147 LVGMLRGIASGMKYLSDMGYVHRDLAARNILI 178
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 128
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 129 SKRFVHRDIAARNVLVSSN 147
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLFDSIS--LAVYLENGDLPGVMEELPSHT-RILVEACIT 735
D DI+S+G EL P + ++L + P +E S + VEAC+
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLN 253
Query: 736 KDWTRRPSAKSLLESPYFPS-TVKSSYLFVAPLQLIARH 773
KD RP+AK LL+ + T K+S+L +LI R+
Sbjct: 254 KDPRFRPTAKELLKHKFITRYTKKTSFL----TELIDRY 288
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 128
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 129 SKRFVHRDIAARNVLVSSN 147
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 49 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 95
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 96 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 149
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY---ICDKPLVGFNSIA 273
E H RF ++ A+ YLH GI +R + NVLL L +C + L ++ +
Sbjct: 120 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 179
Query: 274 DWCTIPT 280
+C P
Sbjct: 180 XFCGTPN 186
>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex:
Destruction Motif Binding And Lysine Specificity On The
Scfbeta-Trcp1 Ubiquitin Ligase
Length = 435
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1430
+ + + + + NTL + T G++ CL + E V ++ G + ++R D+N G+ L
Sbjct: 150 LRDNTIKIWDKNTLECKRILTGHTGSVL-CLQYDERV--IITGSSDSTVRVWDVNTGEML 206
Query: 1431 H-LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI 1489
+ L L + C ++ A +ASP+ D+ V+
Sbjct: 207 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT--------------DITLRRVL 252
Query: 1490 ASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG 1549
RA + +D +VS+S D+T+++W+ + GH GI+
Sbjct: 253 VGHRA----AVNVVDFDDKYIVSASGDRTIKVWNT--STCEFVRTLNGHKRGIACLQYRD 306
Query: 1550 QDVIS-ISNNKIGL 1562
+ V+S S+N I L
Sbjct: 307 RLVVSGSSDNTIRL 320
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 679 DCSKDIFSIGCLLAELHLRRP---LFDSISLAVYLENGDLPGVMEELPSHTRILVEACIT 735
D DI+S+G EL P + + + + P + + VEAC+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 256
Query: 736 KDWTRRPSAKSLLESPY-FPSTVKSSYLFVAPLQLIARH 773
K+ + RP+AK LL+ + + K+SYL +LI R+
Sbjct: 257 KEPSFRPTAKELLKHKFILRNAKKTSYL----TELIDRY 291
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 162 VPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVR 221
+ + E + L+H NV ++ + +T + + Y + + + L S V+
Sbjct: 61 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 120
Query: 222 F-------LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
F +M LL+ + Y+H I HR + +NVL+T
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 158
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 98 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY-AYQLSTALAYLE 156
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 157 SKRFVHRDIAARNVLVSSN 175
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 60 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 106
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 107 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 160
>pdb|4E5Z|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
Dimerization And Its Roles In Chromatinized Dna Repair
Length = 436
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1464 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPE--DHLLVSSSLDKTLRI 1521
AS + G + G L ++ G + + R H VT +A D L ++S+D+T++I
Sbjct: 219 ASSRMVVTGDNVGNVILLNM-DGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277
Query: 1522 WDLRR 1526
WDLR+
Sbjct: 278 WDLRQ 282
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILY-AYQLSTALAYLE 128
Query: 236 SLGIAHRSVCPSNVLLTDS 254
S HR + NVL++ +
Sbjct: 129 SKRFVHRDIAARNVLVSSN 147
>pdb|4E54|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb)
Dimerization And Its Roles In Chromatinized Dna Repair
Length = 435
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1464 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPE--DHLLVSSSLDKTLRI 1521
AS + G + G L ++ G + + R H VT +A D L ++S+D+T++I
Sbjct: 219 ASSRMVVTGDNVGNVILLNM-DGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277
Query: 1522 WDLRR 1526
WDLR+
Sbjct: 278 WDLRQ 282
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 450 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILY-AYQLSTALAYLE 508
Query: 236 SLGIAHRSVCPSNVLLT 252
S HR + NVL++
Sbjct: 509 SKRFVHRDIAARNVLVS 525
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 450 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILY-AYQLSTALAYLE 508
Query: 236 SLGIAHRSVCPSNVLLT 252
S HR + NVL++
Sbjct: 509 SKRFVHRDIAARNVLVS 525
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 48 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 94
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 95 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 148
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+LE++ F S V L Q++S I Y+HS HR V P N L+
Sbjct: 90 SLEDLFNFCSRKF-SLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 138
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 679 DCSKDIFSIGCLLAELHLRRP---LFDSISLAVYLENGDLPGVMEELPSHTRILVEACIT 735
D DI+S+G EL P + + + + P + + VEAC+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 241
Query: 736 KDWTRRPSAKSLLESPY-FPSTVKSSYLFVAPLQLIARH 773
K+ + RP+AK LL+ + + K+SYL +LI R+
Sbjct: 242 KEPSFRPTAKELLKHKFILRNAKKTSYL----TELIDRY 276
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 49 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 95
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 96 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 149
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 49 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 95
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 96 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 149
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 679 DCSKDIFSIGCLLAELHLRRP---LFDSISLAVYLENGDLPGVMEELPSHTRILVEACIT 735
D DI+S+G EL P + + + + P + + VEAC+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 241
Query: 736 KDWTRRPSAKSLLESPY-FPSTVKSSYLFVAPLQLIARH 773
K+ + RP+AK LL+ + + K+SYL +LI R+
Sbjct: 242 KEPSFRPTAKELLKHKFILRNAKKTSYL----TELIDRY 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 52 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 98
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|3EI4|B Chain B, Structure Of The Hsddb1-Hsddb2 Complex
pdb|3EI4|D Chain D, Structure Of The Hsddb1-Hsddb2 Complex
pdb|3EI4|F Chain F, Structure Of The Hsddb1-Hsddb2 Complex
Length = 436
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1464 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPE--DHLLVSSSLDKTLRI 1521
AS + G + G L ++ G + + R H VT +A D L ++S+D+T++I
Sbjct: 220 ASSRMVVTGDNVGNVILLNM-DGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 278
Query: 1522 WDLRR 1526
WDLR+
Sbjct: 279 WDLRQ 283
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 176 HPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH 235
HP++ ++G++ + + + T L + LQ +L + + YQL +A+AYL
Sbjct: 70 HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILY-AYQLSTALAYLE 128
Query: 236 SLGIAHRSVCPSNVLLT 252
S HR + NVL++
Sbjct: 129 SKRFVHRDIAARNVLVS 145
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+LE++ F S V L Q++S I Y+HS HR V P N L+
Sbjct: 90 SLEDLFNFCSRKF-SLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 138
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 162 VPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVR 221
+ + E + L+H NV ++ + +T + + Y + + + L S V+
Sbjct: 62 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK 121
Query: 222 F-------LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
F +M LL+ + Y+H I HR + +NVL+T
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY---ICDKPLVGFNSIA 273
E H RF ++ A+ YLH GI +R + NVLL L +C + L ++ +
Sbjct: 105 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 164
Query: 274 DWCTIPT 280
+C P
Sbjct: 165 XFCGTPN 171
>pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX
pdb|3EWE|C Chain C, Crystal Structure Of The Nup85SEH1 COMPLEX
Length = 349
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1482 DVRSGNVIASWRAHDGYVTKL--AAPE-DHLLVSSSLDKTLRIWD 1523
D + + SWRAHD + + A+PE ++ S+S DKT+++W+
Sbjct: 41 DTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 85
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 217 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY---ICDKPLVGFNSIA 273
E H RF ++ A+ YLH GI +R + NVLL L +C + L ++ +
Sbjct: 109 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 168
Query: 274 DWCTIPT 280
+C P
Sbjct: 169 XFCGTPN 175
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 52 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 98
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 52 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 98
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21
pdb|3F3F|B Chain B, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21
pdb|3F3F|E Chain E, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21
pdb|3F3F|F Chain F, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21
pdb|3F3G|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P212121
pdb|3F3G|B Chain B, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P212121
pdb|3F3G|E Chain E, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P212121
pdb|3F3G|F Chain F, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P212121
Length = 351
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1482 DVRSGNVIASWRAHDGYVTKL--AAPE-DHLLVSSSLDKTLRIWD 1523
D + + SWRAHD + + A+PE ++ S+S DKT+++W+
Sbjct: 43 DTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 51 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 97
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 98 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 151
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
LRHPN G V+ + ++L+ L+ E + + + L +AY
Sbjct: 72 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ-EVEIAAVTHGALQGLAY 130
Query: 234 LHSLGIAHRSVCPSNVLLTD 253
LHS + HR V N+LL++
Sbjct: 131 LHSHNMIHRDVKAGNILLSE 150
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 202 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+LE++ F S V L Q++S I Y+HS HR V P N L+
Sbjct: 88 SLEDLFNFCSRKF-SLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 136
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 47 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 93
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 94 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 221 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+F +++ A+ +HS+G+ HR V P N+LL
Sbjct: 177 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 679 DCSKDIFSIGCLLAELHLRRP---LFDSISLAVYLENGDLPGVMEELPSHTRILVEACIT 735
D DI+S+G EL P + + + + P + + VEAC+
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 261
Query: 736 KDWTRRPSAKSLLESPY-FPSTVKSSYL 762
K+ + RP+AK LL+ + + K+SYL
Sbjct: 262 KEPSFRPTAKELLKHKFILRNAKKTSYL 289
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 47 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 93
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E + L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 94 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 683 DIFSIGCLLAEL-HLRRPLF----DSISLAVYLENGDLPGV-MEELPSHTRILVEACITK 736
DI+S+GCLL E+ L+ P + + SL +E D P + + R LV CI
Sbjct: 218 DIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINP 277
Query: 737 DWTRRPS 743
D +RP
Sbjct: 278 DPEKRPD 284
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 226 QLLSAIAYLHSLGIAHRSVCPSNVLLT 252
QL SA+ ++HS + HR + P+NV +T
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFIT 170
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+E + +++ +L A+ Y+H +G HRSV S++L++
Sbjct: 110 NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS 146
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.0 bits (71), Expect = 2.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 223 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L Q+ + Y+HS + HR + PSN+ L D+
Sbjct: 141 LFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 161 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 218
GVP + E S+ L+H N+ + ++ + + + L+ + +P+ S
Sbjct: 75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDV--SMR 132
Query: 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
++ +YQL++ + + HS HR + P N+LL+ S
Sbjct: 133 VIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVS 168
>pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21212
pdb|3F3P|B Chain B, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21212
pdb|3F3P|E Chain E, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21212
pdb|3F3P|F Chain F, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21212
pdb|3F3P|I Chain I, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21212
pdb|3F3P|J Chain J, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space
Group P21212
Length = 351
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1482 DVRSGNVIASWRAHDGYVTKL--AAPE-DHLLVSSSLDKTLRIWD 1523
D + + SWRAHD + + A+PE ++ S+S DKT+++W+
Sbjct: 43 DTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252
+E + +++ +L A+ Y+H +G HRSV S++L++
Sbjct: 126 NELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS 162
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
LRHPN G V+ + ++L+ L+ E + + + L +AY
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ-EVEIAAVTHGALQGLAY 169
Query: 234 LHSLGIAHRSVCPSNVLLTD 253
LHS + HR V N+LL++
Sbjct: 170 LHSHNMIHRDVKAGNILLSE 189
>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
pdb|3ODT|B Chain B, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1
Length = 313
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 1474 SSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIW 1522
+ G +L D +G+V+ ++ H+ +V + + +VS D+T+RIW
Sbjct: 203 NDGLIKLVDXHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIW 251
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 28/109 (25%)
Query: 1494 AHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVI 1553
H G V L+ +D +++S S DKT ++W S + H SVW V+
Sbjct: 102 GHQGNVCSLSF-QDGVVISGSWDKTAKVWKE----GSLVYNLQAHNA-----SVWDAKVV 151
Query: 1554 SISNNKIGLSSLSKSADE--------------DGQHRLVPQKLYMVDNG 1588
S S NK L+ SAD+ G H V + L +VD+G
Sbjct: 152 SFSENKF----LTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDG 196
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVR 221
E++V ++HPN+ +LG+ +IT + T N+L + + E +
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TYGNLLDYLRECNRQEVNAV 315
Query: 222 FLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+Y Q+ SA+ YL HR++ N L+ ++
Sbjct: 316 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN 351
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 227 LLSAIAYLHSLGIAHRSVCPSNVLLT 252
+L A+AYLH+ G+ HR + ++LLT
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLT 175
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVR 221
E++V ++HPN+ +LG+ +IT + T N+L + + E +
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TYGNLLDYLRECNRQEVNAV 357
Query: 222 FLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+Y Q+ SA+ YL HR++ N L+ ++
Sbjct: 358 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN 393
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDKPL-VGFNSIA 273
+E ++ + SA+ +LH+ GIAHR + P N+L + S + ICD L G
Sbjct: 109 NELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168
Query: 274 DWCTIPTSPMIGCC 287
D I T ++ C
Sbjct: 169 DCSPISTPELLTPC 182
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 45 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 91
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 45 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 91
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 47 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 93
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250
+E ++ + SA+ +LH+ GIAHR + P N+L
Sbjct: 109 NELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 147 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 203
K E + FL+ E++V ++HPN+ +LG+ +IT + T
Sbjct: 47 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TY 93
Query: 204 ENILQFSPNALKSEWHVRFLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
N+L + + E L+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2WU2|C Chain C, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
pdb|2WU2|G Chain G, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
pdb|2WU2|K Chain K, Crystal Structure Of The E. Coli Succinate:quinone
Oxidoreductase (Sqr) Sdhc His84met Mutant
Length = 129
Score = 31.6 bits (70), Expect = 4.1, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP------NALKSEWHVRFLMYQL 227
+R P A L + SG+IT V L SP +A+ + V+F+M+ +
Sbjct: 18 IRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGI 77
Query: 228 LSAIAYLHSLGIAH 241
L+A+AY+ +GI H
Sbjct: 78 LTALAYMVVVGIRH 91
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 167 ESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFL 223
E++V ++HPN+ +LG+ +IT + T N+L + + E L
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TYGNLLDYLRECNRQEVSAVVL 118
Query: 224 MY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
+Y Q+ SA+ YL HR + N L+ ++
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E +R L+ + SA+ YLH I HR + P N++L
Sbjct: 119 KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 216 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
E +R L+ + SA+ YLH I HR + P N++L
Sbjct: 120 KEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 86 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNXGVLHRDIKDENILI 143
>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The
Eed-Ezh2 Polycomb Complex
pdb|3JZG|A Chain A, Structure Of Eed In Complex With H3k27me3
pdb|3JZH|A Chain A, Eed-H3k79me3
Length = 402
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL 1348
G +G ++ + C+ Y GH +N++ + S D L +WN QT L+
Sbjct: 128 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 187
Query: 1349 SVFA 1352
++F
Sbjct: 188 AIFG 191
>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex
Length = 408
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APE-DHLLVSSSLDKTLRIWDLRR 1526
+A G + +L D++SG+ + H + ++ +P D++L ++S D +++WD+RR
Sbjct: 159 VAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 90 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 147
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 89 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 146
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 91 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 106 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 106 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 86 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 91 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 91 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 148
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 106 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 163
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 105 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 86 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 105 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 162
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 113 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 170
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 125 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182
>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed
Length = 361
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL 1348
G +G ++ + C+ Y GH +N++ + S D L +WN QT L+
Sbjct: 87 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 146
Query: 1349 SVFA 1352
++F
Sbjct: 147 AIFG 150
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 627 SNPFENGSRHV-LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIF 685
+N F +G ++V L D L +L H +++ + E+ + ++ S + DI+
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNH---DEDFAKEFVGTPYYMSPEQMNR-MSYNEKSDIW 200
Query: 686 SIGCLLAELHLRRPLFDSIS---LAVYLENGDLPGVMEELPSH-TRILVEACITKDWTRR 741
S+GCLL EL P F + S LA + G + I+ KD+ R
Sbjct: 201 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY-HR 259
Query: 742 PSAKSLLESP 751
PS + +LE+P
Sbjct: 260 PSVEEILENP 269
>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form
pdb|3K26|A Chain A, Complex Structure Of Eed And Trimethylated H3k4
pdb|3K27|A Chain A, Complex Structure Of Eed And Trimethylated H3k9
Length = 366
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL 1348
G +G ++ + C+ Y GH +N++ + S D L +WN QT L+
Sbjct: 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 151
Query: 1349 SVFA 1352
++F
Sbjct: 152 AIFG 155
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 133 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 118 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H3k27 Peptide
Length = 365
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL 1348
G +G ++ + C+ Y GH +N++ + S D L +WN QT L+
Sbjct: 91 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 150
Query: 1349 SVFA 1352
++F
Sbjct: 151 AIFG 154
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 119 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 118 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVR 221
E++V ++HPN+ +LG+ +IT + T N+L + + E
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM-----TYGNLLDYLRECNRQEVSAV 318
Query: 222 FLMY---QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
L+Y Q+ SA+ YL HR++ N L+ ++
Sbjct: 319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN 354
>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H1k26 Peptide
pdb|3IJ0|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H3k9 Peptide
pdb|3IJ1|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H4k20 Peptide
pdb|3IJC|A Chain A, Crystal Structure Of Eed In Complex With Ndsb-195
Length = 365
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL 1348
G +G ++ + C+ Y GH +N++ + S D L +WN QT L+
Sbjct: 91 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 150
Query: 1349 SVFA 1352
++F
Sbjct: 151 AIFG 154
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 118 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 119 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 119 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 118 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 175
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 119 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 176
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 138 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 195
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 133 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 195 VIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251
+I + P ++++ F AL+ E R +Q+L A+ + H+ G+ HR + N+L+
Sbjct: 133 LILERPEPVQDLFDFITERGALQEEL-ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 190
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.8 bits (68), Expect = 6.9, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 165 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 224
F E + L HPN+ + +++T + ++ + E + E R
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLY-LVXEYASGGEVFDYLVAHGRXKEKEARAKF 119
Query: 225 YQLLSAIAYLHSLGIAHRSVCPSNVLL 251
Q++SA+ Y H I HR + N+LL
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3FL7|A Chain A, Crystal Structure Of The Human Ephrin A2 Ectodomain
Length = 536
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 1168 STSQCNPAKLLLNG-------VGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATS 1219
S +Q P K+ L G V WSIP Q SR K + R+ D + +V R E S
Sbjct: 438 SINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTEGFS 496
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLA---VYLENGDLPGVMEELPSHTRILVEACITK--- 736
DI+S+GC+L L + +P F++ L + ++ + +P H + A I +
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-----SVPRHINPVASALIRRMLH 278
Query: 737 -DWTRRPSAKSLLESPYF-----PSTVKSSYLFVAP 766
D T RPS LL +F P + +S L V P
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPP 314
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLA---VYLENGDLPGVMEELPSHTRILVEACITK--- 736
DI+S+GC+L L + +P F++ L + ++ + +P H + A I +
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-----SVPRHINPVASALIRRMLH 278
Query: 737 -DWTRRPSAKSLLESPYF-----PSTVKSSYLFVAP 766
D T RPS LL +F P + +S L V P
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPP 314
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.4 bits (67), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLF 701
D + D++S+GC+L E+H PLF
Sbjct: 217 DLAIDMWSLGCILVEMHTGEPLF 239
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 30.4 bits (67), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
++HP + ++ +T G + ++ E +Q + E F + ++ A+ +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 234 LHSLGIAHRSVCPSNVLLT 252
LH GI +R + P N++L
Sbjct: 137 LHQKGIIYRDLKPENIMLN 155
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLF 701
D + D++S+GC+L E+H PLF
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLF 258
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 679 DCSKDIFSIGCLLAELHLRRPLF 701
D + D++S+GC+L E+H PLF
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLF 258
>pdb|2X11|A Chain A, Crystal Structure Of The Complete Epha2 Ectodomain In
Complex With Ephrin A5 Receptor Binding Domain
Length = 545
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 1168 STSQCNPAKLLLNG-------VGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATS 1219
S +Q P K+ L G V WSIP Q SR K + R+ D + +V R E S
Sbjct: 435 SINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTEGFS 493
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLA---VYLENGDLPGVMEELPSHTRILVEACITK--- 736
DI+S+GC+L L + +P F++ L + ++ + +P H + A I +
Sbjct: 208 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-----SVPRHINPVASALIRRMLH 262
Query: 737 -DWTRRPSAKSLLESPYF-----PSTVKSSYLFVAP 766
D T RPS LL +F P + +S L V P
Sbjct: 263 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPP 298
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 683 DIFSIGCLLAELHLRRPLFDSISLA---VYLENGDLPGVMEELPSHTRILVEACITK--- 736
DI+S+GC+L L + +P F++ L + ++ + +P H + A I +
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-----SVPRHINPVASALIRRMLH 278
Query: 737 -DWTRRPSAKSLLESPYF-----PSTVKSSYLFVAP 766
D T RPS LL +F P + +S L V P
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPP 314
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 195 VIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254
V+P +L++ L SP + SE V + +LL A+ +LH H +V N+ +
Sbjct: 136 VLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE 195
Query: 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 314
S + L G+ +C P+ + +EG S DL+ SMD H
Sbjct: 196 DQSQVT-----LAGYGFAFRYC--PSGKHVA-YVEGSRSPH-EGDLEFI-SMDLHKGCGP 245
Query: 315 WWRGELSNFEYLLF 328
R +L + Y +
Sbjct: 246 SRRSDLQSLGYCML 259
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 30.0 bits (66), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 174 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 233
++HP + ++ +T G + ++ E +Q + E F + ++ A+ +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGG-ELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 234 LHSLGIAHRSVCPSNVLLT 252
LH GI +R + P N++L
Sbjct: 137 LHQKGIIYRDLKPENIMLN 155
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,047,187
Number of Sequences: 62578
Number of extensions: 2072021
Number of successful extensions: 5862
Number of sequences better than 100.0: 734
Number of HSP's better than 100.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 230
Number of HSP's that attempted gapping in prelim test: 4646
Number of HSP's gapped (non-prelim): 1321
length of query: 1620
length of database: 14,973,337
effective HSP length: 112
effective length of query: 1508
effective length of database: 7,964,601
effective search space: 12010618308
effective search space used: 12010618308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)