Query 000355
Match_columns 1620
No_of_seqs 1404 out of 7920
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 05:35:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000355.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000355hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06071 Beach BEACH (Beige and 100.0 5.7E-67 1.2E-71 591.5 10.4 233 312-544 1-275 (275)
2 KOG4190 Uncharacterized conser 100.0 1.9E-65 4E-70 582.5 21.5 714 803-1620 8-1034(1034)
3 PF02138 Beach: Beige/BEACH do 100.0 3.8E-65 8.2E-70 578.3 5.5 233 312-544 1-270 (270)
4 PLN00181 protein SPA1-RELATED; 100.0 6E-47 1.3E-51 505.2 55.2 293 1265-1620 479-791 (793)
5 KOG0659 Cdk activating kinase 100.0 2E-48 4.4E-53 419.6 19.3 149 104-269 2-150 (318)
6 KOG0271 Notchless-like WD40 re 100.0 2.9E-46 6.3E-51 414.9 27.6 330 1218-1619 108-478 (480)
7 KOG0663 Protein kinase PITSLRE 100.0 2.7E-45 5.8E-50 405.6 18.7 157 97-270 69-227 (419)
8 KOG0600 Cdc2-related protein k 100.0 7.4E-45 1.6E-49 421.9 18.9 179 99-304 112-292 (560)
9 KOG0593 Predicted protein kina 100.0 2.9E-45 6.4E-50 400.2 14.1 151 103-270 1-151 (396)
10 KOG0661 MAPK related serine/th 100.0 8.2E-45 1.8E-49 418.6 13.7 175 99-303 5-181 (538)
11 KOG0660 Mitogen-activated prot 100.0 8.6E-44 1.9E-48 401.8 16.8 175 102-303 20-199 (359)
12 KOG0615 Serine/threonine prote 100.0 2.5E-43 5.3E-48 400.2 15.7 179 102-305 170-352 (475)
13 KOG0575 Polo-like serine/threo 100.0 2.1E-41 4.7E-46 403.4 23.2 173 104-304 18-191 (592)
14 KOG0271 Notchless-like WD40 re 100.0 2.8E-40 6.1E-45 367.3 25.3 290 1259-1620 105-437 (480)
15 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-40 3.8E-45 377.3 18.7 174 103-303 10-192 (323)
16 KOG0592 3-phosphoinositide-dep 100.0 1.4E-39 3E-44 380.8 22.8 154 100-270 69-224 (604)
17 KOG0658 Glycogen synthase kina 100.0 1.8E-40 3.8E-45 375.6 14.8 146 104-270 24-176 (364)
18 KOG1787 Kinase A-anchor protei 100.0 4.1E-41 8.8E-46 431.4 4.0 240 310-549 470-755 (1126)
19 KOG0597 Serine-threonine prote 100.0 4.7E-39 1E-43 374.2 15.4 173 103-304 1-173 (808)
20 KOG0595 Serine/threonine-prote 100.0 5E-39 1.1E-43 366.7 14.5 210 102-340 8-222 (429)
21 KOG0581 Mitogen-activated prot 100.0 2.2E-38 4.8E-43 359.5 19.3 184 103-318 78-264 (364)
22 KOG0662 Cyclin-dependent kinas 100.0 6.2E-39 1.3E-43 325.9 12.4 146 104-268 2-149 (292)
23 KOG0272 U4/U6 small nuclear ri 100.0 3.6E-37 7.8E-42 347.9 23.7 277 1267-1620 173-458 (459)
24 KOG0666 Cyclin C-dependent kin 100.0 2.3E-38 5E-43 346.5 11.7 158 102-269 22-185 (438)
25 KOG0598 Ribosomal protein S6 k 100.0 4.1E-38 8.9E-43 357.4 14.0 206 103-337 24-230 (357)
26 KOG0272 U4/U6 small nuclear ri 100.0 3.9E-37 8.5E-42 347.6 21.2 274 1223-1564 173-458 (459)
27 KOG0588 Serine/threonine prote 100.0 2.4E-37 5.1E-42 368.1 18.9 177 100-305 8-185 (786)
28 KOG0667 Dual-specificity tyros 100.0 3.2E-37 6.8E-42 372.5 19.0 148 105-269 187-340 (586)
29 KOG1240 Protein kinase contain 100.0 6.5E-35 1.4E-39 361.8 36.7 313 1255-1619 1034-1430(1431)
30 KOG0033 Ca2+/calmodulin-depend 100.0 3.8E-38 8.3E-43 334.7 5.4 177 100-304 7-185 (355)
31 KOG0694 Serine/threonine prote 100.0 2.2E-36 4.8E-41 363.9 19.5 175 101-304 365-541 (694)
32 KOG0583 Serine/threonine prote 100.0 1.1E-35 2.4E-40 358.6 23.8 176 102-305 15-195 (370)
33 KOG0591 NIMA (never in mitosis 100.0 5E-38 1.1E-42 340.5 1.2 210 103-340 18-236 (375)
34 KOG0286 G-protein beta subunit 100.0 4.2E-34 9.1E-39 310.0 30.4 280 1218-1564 48-343 (343)
35 KOG0198 MEKK and related serin 100.0 2E-35 4.2E-40 342.7 18.2 174 103-303 16-193 (313)
36 KOG0610 Putative serine/threon 100.0 5E-34 1.1E-38 325.4 24.8 153 104-271 77-230 (459)
37 KOG0605 NDR and related serine 100.0 2.3E-35 5E-40 346.6 13.9 230 102-350 139-405 (550)
38 KOG0286 G-protein beta subunit 100.0 1E-32 2.2E-37 299.3 31.0 283 1261-1620 47-343 (343)
39 KOG0616 cAMP-dependent protein 100.0 8.1E-35 1.8E-39 318.8 12.4 203 102-336 42-245 (355)
40 KOG0279 G protein beta subunit 100.0 2.5E-32 5.4E-37 295.1 30.5 282 1217-1566 7-313 (315)
41 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-33 4.3E-38 331.8 24.0 148 103-268 4-151 (288)
42 KOG0578 p21-activated serine/t 100.0 3.6E-34 7.8E-39 339.4 17.2 169 103-303 272-441 (550)
43 KOG0585 Ca2+/calmodulin-depend 100.0 4.1E-34 8.8E-39 329.5 15.3 185 100-303 93-287 (576)
44 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.7E-33 1E-37 331.0 24.7 148 103-268 4-151 (303)
45 KOG0279 G protein beta subunit 100.0 7.1E-32 1.5E-36 291.6 30.8 293 1261-1619 7-310 (315)
46 KOG0295 WD40 repeat-containing 100.0 4.4E-33 9.5E-38 309.9 21.7 290 1218-1564 101-404 (406)
47 KOG0032 Ca2+/calmodulin-depend 100.0 6.1E-33 1.3E-37 334.4 24.5 175 101-303 32-210 (382)
48 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.2E-33 1.3E-37 334.8 24.5 147 105-269 1-152 (338)
49 KOG0599 Phosphorylase kinase g 100.0 6.4E-35 1.4E-39 314.1 6.2 177 103-305 16-196 (411)
50 KOG0582 Ste20-like serine/thre 100.0 7.2E-33 1.6E-37 317.9 22.8 182 98-303 20-202 (516)
51 KOG0319 WD40-repeat-containing 100.0 1.3E-32 2.8E-37 328.6 24.9 360 1224-1620 104-575 (775)
52 cd05612 STKc_PRKX_like Catalyt 100.0 7.7E-33 1.7E-37 327.3 22.3 149 104-269 1-150 (291)
53 cd05571 STKc_PKB Catalytic dom 100.0 8.5E-33 1.8E-37 332.0 22.2 142 110-269 1-144 (323)
54 PTZ00036 glycogen synthase kin 100.0 1.5E-32 3.3E-37 342.9 25.1 146 103-269 65-220 (440)
55 PTZ00263 protein kinase A cata 100.0 1.5E-32 3.2E-37 330.8 23.2 149 103-269 17-167 (329)
56 KOG0315 G-protein beta subunit 100.0 2.5E-31 5.3E-36 282.5 28.7 263 1241-1566 11-288 (311)
57 PTZ00426 cAMP-dependent protei 100.0 2.7E-32 5.8E-37 329.9 24.3 151 102-269 28-180 (340)
58 cd07862 STKc_CDK6 Catalytic do 100.0 2.2E-32 4.8E-37 322.7 22.9 151 104-269 1-159 (290)
59 cd07848 STKc_CDKL5 Catalytic d 100.0 3.2E-32 6.9E-37 320.8 23.9 149 104-269 1-149 (287)
60 KOG0318 WD40 repeat stress pro 100.0 1.1E-30 2.4E-35 301.5 35.6 377 1220-1620 142-600 (603)
61 KOG0285 Pleiotropic regulator 100.0 1.2E-31 2.6E-36 296.5 26.2 294 1255-1619 137-436 (460)
62 PHA03212 serine/threonine kina 100.0 3.7E-32 8E-37 334.3 23.9 183 103-321 91-273 (391)
63 cd05631 STKc_GRK4 Catalytic do 100.0 4.1E-32 9E-37 320.1 23.0 149 105-269 1-151 (285)
64 KOG0296 Angio-associated migra 100.0 1.2E-30 2.6E-35 290.9 31.9 324 1215-1620 54-396 (399)
65 KOG0295 WD40 repeat-containing 100.0 8.5E-32 1.8E-36 299.6 22.3 289 1254-1619 93-403 (406)
66 KOG0313 Microtubule binding pr 100.0 2E-31 4.4E-36 297.9 24.9 331 1192-1566 72-418 (423)
67 cd05585 STKc_YPK1_like Catalyt 100.0 7.2E-32 1.6E-36 322.4 22.4 140 112-269 1-142 (312)
68 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.6E-32 2.1E-36 324.3 23.3 148 104-269 1-150 (333)
69 cd07853 STKc_NLK Catalytic dom 100.0 1E-31 2.2E-36 329.2 23.4 147 105-269 1-152 (372)
70 KOG4717 Serine/threonine prote 100.0 2.8E-32 6.1E-37 313.5 16.9 154 100-269 14-168 (864)
71 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-31 3E-36 322.2 23.8 142 110-269 1-144 (328)
72 KOG0669 Cyclin T-dependent kin 100.0 8.8E-34 1.9E-38 302.5 4.0 154 99-269 12-173 (376)
73 KOG0611 Predicted serine/threo 100.0 2.2E-33 4.7E-38 315.1 6.9 205 103-337 52-258 (668)
74 KOG0596 Dual specificity; seri 100.0 3.2E-32 6.9E-37 318.5 16.6 172 105-304 362-534 (677)
75 PHA03207 serine/threonine kina 100.0 4.9E-31 1.1E-35 325.2 28.3 144 103-269 91-234 (392)
76 cd07868 STKc_CDK8 Catalytic do 100.0 1.8E-31 3.9E-36 319.3 23.4 143 109-269 6-161 (317)
77 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.4E-31 5.3E-36 317.2 24.3 148 103-268 5-152 (309)
78 cd07863 STKc_CDK4 Catalytic do 100.0 2.6E-31 5.6E-36 313.1 23.6 148 105-268 1-156 (288)
79 cd07876 STKc_JNK2 Catalytic do 100.0 3.3E-31 7.2E-36 323.0 25.3 187 102-320 19-211 (359)
80 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-31 4.1E-36 320.4 22.8 141 110-268 1-143 (323)
81 cd05590 STKc_nPKC_eta Catalyti 100.0 2.1E-31 4.5E-36 319.6 22.7 142 110-269 1-145 (320)
82 KOG0265 U5 snRNP-specific prot 100.0 8.1E-31 1.7E-35 285.8 24.8 280 1214-1562 36-334 (338)
83 cd05589 STKc_PKN Catalytic dom 100.0 3.6E-31 7.8E-36 318.1 24.5 144 106-268 1-149 (324)
84 KOG0201 Serine/threonine prote 100.0 8.3E-33 1.8E-37 317.9 9.6 172 103-304 12-184 (467)
85 cd05596 STKc_ROCK Catalytic do 100.0 2.8E-31 6.1E-36 324.8 23.6 173 103-303 42-215 (370)
86 cd05614 STKc_MSK2_N N-terminal 100.0 2.8E-31 6.1E-36 320.0 22.9 150 105-269 1-154 (332)
87 cd05584 STKc_p70S6K Catalytic 100.0 2.7E-31 5.7E-36 319.1 22.5 145 109-268 1-148 (323)
88 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-31 4.4E-36 320.4 20.6 142 110-269 1-145 (325)
89 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.8E-31 6E-36 321.6 21.5 151 100-269 11-167 (343)
90 cd07875 STKc_JNK1 Catalytic do 100.0 8.9E-31 1.9E-35 319.8 26.0 187 102-320 22-214 (364)
91 cd05587 STKc_cPKC Catalytic do 100.0 6.5E-31 1.4E-35 315.8 24.3 146 105-268 1-149 (324)
92 cd07874 STKc_JNK3 Catalytic do 100.0 5.9E-31 1.3E-35 320.3 24.2 185 102-318 15-205 (355)
93 cd05597 STKc_DMPK_like Catalyt 100.0 9.4E-31 2E-35 315.4 25.1 174 104-303 1-175 (331)
94 PTZ00284 protein kinase; Provi 100.0 2.4E-30 5.2E-35 326.4 29.8 183 103-318 128-332 (467)
95 KOG0315 G-protein beta subunit 100.0 7.5E-30 1.6E-34 271.3 28.2 264 1282-1620 11-286 (311)
96 cd05620 STKc_nPKC_delta Cataly 100.0 7.4E-31 1.6E-35 314.3 23.1 141 110-268 1-144 (316)
97 cd05616 STKc_cPKC_beta Catalyt 100.0 1E-30 2.2E-35 314.0 24.0 147 105-269 1-150 (323)
98 cd05588 STKc_aPKC Catalytic do 100.0 8E-31 1.7E-35 315.8 23.0 143 110-269 1-145 (329)
99 cd05591 STKc_nPKC_epsilon Cata 100.0 6.7E-31 1.5E-35 315.3 22.2 141 110-268 1-144 (321)
100 KOG0580 Serine/threonine prote 100.0 2.1E-32 4.6E-37 292.3 7.8 209 99-336 17-226 (281)
101 cd05575 STKc_SGK Catalytic dom 100.0 9.7E-31 2.1E-35 314.2 22.2 141 110-268 1-144 (323)
102 KOG0281 Beta-TrCP (transducin 100.0 1.8E-31 3.9E-36 293.2 14.4 269 1225-1568 197-479 (499)
103 cd05592 STKc_nPKC_theta_delta 100.0 1.3E-30 2.8E-35 312.1 23.0 142 110-269 1-145 (316)
104 cd05582 STKc_RSK_N N-terminal 100.0 5.5E-31 1.2E-35 315.6 19.4 146 109-269 1-147 (318)
105 KOG0265 U5 snRNP-specific prot 100.0 7E-30 1.5E-34 278.6 26.0 282 1261-1618 39-334 (338)
106 KOG0285 Pleiotropic regulator 100.0 3.3E-30 7.1E-35 285.1 23.7 282 1218-1566 144-439 (460)
107 cd06649 PKc_MEK2 Catalytic dom 100.0 3.4E-30 7.5E-35 310.5 26.2 184 103-318 4-189 (331)
108 PHA03209 serine/threonine kina 100.0 2.7E-30 5.9E-35 314.7 25.2 182 103-321 65-246 (357)
109 KOG0319 WD40-repeat-containing 100.0 8.9E-30 1.9E-34 304.5 28.1 368 1217-1619 139-616 (775)
110 cd05619 STKc_nPKC_theta Cataly 100.0 2.1E-30 4.6E-35 310.3 23.1 142 110-269 1-145 (316)
111 KOG0273 Beta-transducin family 100.0 1.6E-29 3.5E-34 289.1 28.7 313 1224-1620 177-521 (524)
112 cd05570 STKc_PKC Catalytic dom 100.0 2.2E-30 4.8E-35 310.4 22.7 141 110-268 1-144 (318)
113 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.8E-30 8.3E-35 305.6 24.5 148 103-268 5-152 (301)
114 KOG1786 Lysosomal trafficking 100.0 1.4E-32 3.1E-37 363.3 3.8 241 308-548 335-630 (1081)
115 KOG0263 Transcription initiati 100.0 4.6E-30 1E-34 311.0 24.8 231 1231-1527 386-651 (707)
116 PLN00034 mitogen-activated pro 100.0 1.9E-30 4.2E-35 315.6 21.8 144 103-269 73-217 (353)
117 KOG0645 WD40 repeat protein [G 100.0 1.3E-28 2.8E-33 265.3 32.1 285 1261-1619 6-308 (312)
118 cd05605 STKc_GRK4_like Catalyt 100.0 4.9E-30 1.1E-34 302.5 23.5 148 105-268 1-150 (285)
119 cd05615 STKc_cPKC_alpha Cataly 100.0 5.3E-30 1.1E-34 307.9 24.2 147 105-269 1-150 (323)
120 KOG0263 Transcription initiati 100.0 1.7E-29 3.7E-34 306.1 28.5 244 1261-1567 370-650 (707)
121 PTZ00283 serine/threonine prot 100.0 5.9E-30 1.3E-34 323.6 25.6 151 103-269 31-192 (496)
122 cd07861 STKc_CDK1_euk Catalyti 100.0 6.3E-30 1.4E-34 300.6 24.1 148 105-268 1-149 (285)
123 cd05610 STKc_MASTL Catalytic d 100.0 6E-29 1.3E-33 324.7 35.6 188 103-318 3-192 (669)
124 KOG0266 WD40 repeat-containing 100.0 3.9E-29 8.5E-34 312.4 32.4 276 1225-1566 159-454 (456)
125 KOG0579 Ste20-like serine/thre 100.0 2.1E-31 4.5E-36 311.5 10.6 173 102-304 30-203 (1187)
126 KOG0291 WD40-repeat-containing 100.0 1.2E-28 2.6E-33 294.1 34.2 318 1241-1620 278-610 (893)
127 cd07867 STKc_CDC2L6 Catalytic 100.0 5.9E-30 1.3E-34 306.0 22.9 143 109-269 6-161 (317)
128 cd05608 STKc_GRK1 Catalytic do 100.0 5.4E-30 1.2E-34 301.2 22.2 142 112-269 1-146 (280)
129 KOG0316 Conserved WD40 repeat- 100.0 1.6E-29 3.5E-34 266.6 23.1 277 1217-1565 9-298 (307)
130 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-29 2.3E-34 303.0 24.1 150 102-268 5-156 (309)
131 KOG0318 WD40 repeat stress pro 100.0 4.3E-28 9.2E-33 280.3 35.9 348 1218-1620 52-558 (603)
132 KOG0282 mRNA splicing factor [ 100.0 2.4E-30 5.3E-35 297.3 17.3 286 1259-1620 204-503 (503)
133 KOG4279 Serine/threonine prote 100.0 1.1E-30 2.3E-35 308.7 14.5 164 110-303 581-748 (1226)
134 PTZ00267 NIMA-related protein 100.0 1.6E-29 3.4E-34 319.4 26.1 149 104-269 67-218 (478)
135 KOG0291 WD40-repeat-containing 100.0 6.3E-28 1.4E-32 288.1 36.9 360 1219-1620 139-548 (893)
136 KOG0273 Beta-transducin family 100.0 1.3E-28 2.9E-33 281.6 29.0 277 1230-1566 242-523 (524)
137 cd06650 PKc_MEK1 Catalytic dom 100.0 2.3E-29 5E-34 303.6 24.2 187 103-321 4-192 (333)
138 KOG0284 Polyadenylation factor 100.0 4.1E-30 8.8E-35 289.5 16.1 277 1268-1620 95-378 (464)
139 KOG0293 WD40 repeat-containing 100.0 1.3E-29 2.8E-34 284.8 19.9 280 1218-1566 217-513 (519)
140 cd05630 STKc_GRK6 Catalytic do 100.0 2E-29 4.3E-34 297.3 22.7 148 105-268 1-150 (285)
141 cd05607 STKc_GRK7 Catalytic do 100.0 2.6E-29 5.6E-34 295.1 22.5 142 112-268 1-143 (277)
142 cd07839 STKc_CDK5 Catalytic do 100.0 1.2E-29 2.6E-34 298.3 19.7 147 105-268 1-147 (284)
143 PTZ00266 NIMA-related protein 100.0 3.5E-29 7.5E-34 324.7 24.8 175 103-303 12-213 (1021)
144 cd00200 WD40 WD40 domain, foun 100.0 1.3E-27 2.7E-32 275.2 35.1 282 1262-1620 2-289 (289)
145 KOG4236 Serine/threonine prote 100.0 2.3E-30 5E-35 298.4 11.5 192 104-321 562-756 (888)
146 cd08227 PK_STRAD_alpha Pseudok 100.0 4.9E-29 1.1E-33 300.0 23.5 145 108-268 2-149 (327)
147 KOG0266 WD40 repeat-containing 100.0 4.1E-28 9E-33 303.2 32.6 281 1262-1619 151-451 (456)
148 cd06625 STKc_MEKK3_like Cataly 100.0 9.7E-29 2.1E-33 286.9 24.9 147 104-268 2-152 (263)
149 KOG0281 Beta-TrCP (transducin 100.0 4.7E-30 1E-34 282.1 12.9 274 1268-1620 196-475 (499)
150 KOG4645 MAPKKK (MAP kinase kin 100.0 4.4E-31 9.6E-36 333.5 5.4 177 103-304 1234-1411(1509)
151 KOG0316 Conserved WD40 repeat- 100.0 2.7E-28 5.8E-33 257.4 25.0 275 1259-1614 7-292 (307)
152 cd05632 STKc_GRK5 Catalytic do 100.0 9.9E-29 2.1E-33 291.3 24.5 148 105-268 1-150 (285)
153 KOG0668 Casein kinase II, alph 100.0 2.3E-30 5E-35 273.1 9.0 145 99-268 33-181 (338)
154 cd07832 STKc_CCRK Catalytic do 100.0 1E-28 2.2E-33 290.4 23.8 147 105-268 1-147 (286)
155 cd07841 STKc_CDK7 Catalytic do 100.0 1.3E-28 2.9E-33 291.7 24.7 148 105-268 1-150 (298)
156 cd07860 STKc_CDK2_3 Catalytic 100.0 7.4E-29 1.6E-33 291.6 22.0 148 105-268 1-148 (284)
157 cd07849 STKc_ERK1_2_like Catal 100.0 8.6E-29 1.9E-33 299.0 23.1 147 102-268 3-154 (336)
158 cd08223 STKc_Nek4 Catalytic do 100.0 2.7E-28 5.8E-33 282.1 25.4 148 105-268 1-150 (257)
159 KOG0192 Tyrosine kinase specif 100.0 1.9E-29 4.1E-34 301.8 15.8 200 104-332 41-246 (362)
160 cd07844 STKc_PCTAIRE_like Cata 100.0 1.8E-28 3.9E-33 289.6 24.0 148 103-268 4-151 (291)
161 KOG0306 WD40-repeat-containing 100.0 9.8E-28 2.1E-32 286.3 29.9 357 1216-1619 98-661 (888)
162 KOG0284 Polyadenylation factor 100.0 2.9E-29 6.3E-34 282.6 16.0 276 1227-1570 100-384 (464)
163 cd00200 WD40 WD40 domain, foun 100.0 5E-27 1.1E-31 270.2 34.8 278 1219-1564 3-289 (289)
164 cd07855 STKc_ERK5 Catalytic do 100.0 9.9E-29 2.1E-33 298.2 21.3 148 103-268 4-155 (334)
165 cd07842 STKc_CDK8_like Catalyt 100.0 2.2E-28 4.8E-33 292.0 23.7 151 105-269 1-161 (316)
166 cd05629 STKc_NDR_like_fungal C 100.0 5.2E-29 1.1E-33 305.8 18.8 213 104-334 1-250 (377)
167 KOG0665 Jun-N-terminal kinase 100.0 1.3E-29 2.8E-34 281.0 11.7 184 103-319 16-205 (369)
168 cd07865 STKc_CDK9 Catalytic do 100.0 4E-28 8.7E-33 288.8 25.5 154 98-268 6-167 (310)
169 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.6E-28 5.5E-33 287.0 23.4 147 104-268 1-148 (286)
170 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.7E-28 3.8E-33 296.5 22.5 149 102-268 3-156 (337)
171 cd05628 STKc_NDR1 Catalytic do 100.0 5.4E-29 1.2E-33 304.0 18.2 215 104-336 1-240 (363)
172 cd08529 STKc_FA2-like Catalyti 100.0 5.8E-28 1.3E-32 279.0 25.5 148 105-268 1-149 (256)
173 cd05625 STKc_LATS1 Catalytic d 100.0 8.9E-29 1.9E-33 304.3 19.5 214 105-336 2-252 (382)
174 cd06615 PKc_MEK Catalytic doma 100.0 5E-28 1.1E-32 288.7 25.4 146 104-268 1-148 (308)
175 cd05580 STKc_PKA Catalytic dom 100.0 5.5E-28 1.2E-32 285.6 25.4 147 104-268 1-149 (290)
176 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-28 4.8E-33 289.1 22.1 150 102-268 3-154 (293)
177 KOG0607 MAP kinase-interacting 100.0 1.4E-29 2.9E-34 278.5 10.6 212 103-337 76-296 (463)
178 cd07837 STKc_CdkB_plant Cataly 100.0 3.7E-28 8E-33 287.3 23.5 149 104-268 1-159 (295)
179 KOG0293 WD40 repeat-containing 100.0 3E-28 6.5E-33 273.9 21.2 283 1260-1619 215-510 (519)
180 KOG0276 Vesicle coat complex C 100.0 1.4E-27 3E-32 279.6 27.5 281 1220-1565 8-297 (794)
181 cd06631 STKc_YSK4 Catalytic do 100.0 6.1E-28 1.3E-32 280.8 24.7 149 105-268 1-150 (265)
182 PLN00009 cyclin-dependent kina 100.0 4.1E-28 8.9E-33 287.0 23.3 150 104-268 2-151 (294)
183 cd07866 STKc_BUR1 Catalytic do 100.0 3.5E-28 7.5E-33 289.5 22.8 149 103-268 7-163 (311)
184 cd05574 STKc_phototropin_like 100.0 9.6E-28 2.1E-32 287.0 26.2 150 104-269 1-152 (316)
185 cd05626 STKc_LATS2 Catalytic d 100.0 1.2E-28 2.5E-33 303.1 18.8 211 105-334 2-250 (381)
186 KOG0645 WD40 repeat protein [G 100.0 5.5E-27 1.2E-31 252.8 29.1 277 1218-1566 7-311 (312)
187 KOG0292 Vesicle coat complex C 100.0 1.6E-27 3.4E-32 287.3 27.4 320 1230-1611 16-384 (1202)
188 cd06637 STKc_TNIK Catalytic do 100.0 7.1E-28 1.5E-32 281.2 23.9 148 103-269 5-160 (272)
189 cd05598 STKc_LATS Catalytic do 100.0 1.4E-28 3.1E-33 301.8 18.7 214 104-335 1-247 (376)
190 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.3E-28 9.2E-33 293.7 22.5 146 103-268 4-163 (342)
191 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-28 3E-33 300.5 18.0 211 104-332 1-239 (364)
192 KOG0690 Serine/threonine prote 100.0 1.2E-29 2.6E-34 278.7 7.7 205 102-335 166-371 (516)
193 cd06654 STKc_PAK1 Catalytic do 100.0 1E-27 2.2E-32 284.4 24.8 149 99-268 15-164 (296)
194 cd06611 STKc_SLK_like Catalyti 100.0 5.5E-28 1.2E-32 283.7 22.3 147 103-268 4-151 (280)
195 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-27 2.3E-32 277.1 24.3 148 105-268 1-149 (256)
196 cd06643 STKc_SLK Catalytic dom 100.0 1.1E-27 2.4E-32 281.6 24.7 145 105-268 6-151 (282)
197 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-27 3.4E-32 275.8 25.6 148 105-268 1-149 (256)
198 cd06630 STKc_MEKK1 Catalytic d 100.0 8.2E-28 1.8E-32 279.9 23.3 147 105-268 1-152 (268)
199 cd06619 PKc_MKK5 Catalytic dom 100.0 9.1E-28 2E-32 282.1 23.8 142 104-268 1-143 (279)
200 KOG0589 Serine/threonine prote 100.0 1.9E-29 4.1E-34 299.2 9.4 206 103-336 3-210 (426)
201 cd06644 STKc_STK10_LOK Catalyt 100.0 1.3E-27 2.7E-32 282.7 25.0 147 103-268 11-158 (292)
202 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.5E-27 3.2E-32 277.8 25.0 150 105-268 1-154 (267)
203 cd07880 STKc_p38gamma_MAPK12 C 100.0 1E-27 2.2E-32 290.5 24.3 151 99-268 10-166 (343)
204 cd05609 STKc_MAST Catalytic do 100.0 1.9E-27 4.1E-32 283.2 26.2 148 104-269 1-150 (305)
205 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-27 2.4E-32 284.2 24.1 147 101-268 16-163 (297)
206 cd07846 STKc_CDKL2_3 Catalytic 100.0 4E-28 8.6E-33 285.5 20.0 147 104-268 1-148 (286)
207 cd06651 STKc_MEKK3 Catalytic d 100.0 1.7E-27 3.7E-32 277.5 24.6 146 105-268 3-154 (266)
208 cd08220 STKc_Nek8 Catalytic do 100.0 2.6E-27 5.7E-32 273.5 25.8 149 105-268 1-150 (256)
209 cd06646 STKc_MAP4K5 Catalytic 100.0 1.4E-27 3.1E-32 278.0 23.8 146 103-268 8-154 (267)
210 cd06645 STKc_MAP4K3 Catalytic 100.0 8.2E-28 1.8E-32 280.1 21.6 146 103-268 8-154 (267)
211 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.6E-27 3.5E-32 289.0 24.9 150 100-268 13-168 (345)
212 cd07831 STKc_MOK Catalytic dom 100.0 1.3E-27 2.8E-32 280.4 22.7 144 106-268 1-147 (282)
213 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-27 2.9E-32 281.4 22.9 148 104-268 1-151 (286)
214 cd07834 STKc_MAPK Catalytic do 100.0 6.3E-28 1.4E-32 290.4 20.1 147 105-269 1-152 (330)
215 KOG0608 Warts/lats-like serine 100.0 5.4E-29 1.2E-33 292.5 10.4 227 105-350 630-888 (1034)
216 cd07857 STKc_MPK1 Catalytic do 100.0 2.6E-27 5.7E-32 285.6 25.4 148 105-268 1-153 (332)
217 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-27 3.4E-32 280.2 22.7 147 106-268 1-147 (283)
218 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-27 2.9E-32 280.7 22.1 147 105-268 1-148 (284)
219 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-27 4.2E-32 279.2 23.4 148 104-268 1-152 (283)
220 cd06655 STKc_PAK2 Catalytic do 100.0 2.4E-27 5.3E-32 281.2 24.4 145 103-268 18-163 (296)
221 PTZ00024 cyclin-dependent prot 100.0 1.8E-27 3.8E-32 287.3 23.5 157 102-268 6-167 (335)
222 cd05621 STKc_ROCK2 Catalytic d 100.0 3.7E-28 7.9E-33 297.2 17.8 205 103-336 42-251 (370)
223 cd08225 STKc_Nek5 Catalytic do 100.0 2.4E-27 5.1E-32 274.1 23.5 149 105-268 1-150 (257)
224 cd05627 STKc_NDR2 Catalytic do 100.0 4.9E-28 1.1E-32 295.3 18.3 214 104-335 1-239 (360)
225 KOG0643 Translation initiation 100.0 7.6E-27 1.7E-31 250.8 25.1 288 1264-1619 5-314 (327)
226 KOG0574 STE20-like serine/thre 100.0 7.6E-30 1.6E-34 277.4 2.0 198 104-340 33-232 (502)
227 cd05633 STKc_GRK3 Catalytic do 100.0 2.1E-27 4.5E-32 279.3 22.4 141 111-268 1-145 (279)
228 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-27 4E-32 288.1 22.7 150 99-268 10-165 (342)
229 PLN00181 protein SPA1-RELATED; 100.0 4.3E-26 9.4E-31 305.0 37.6 277 1220-1565 478-792 (793)
230 cd06610 STKc_OSR1_SPAK Catalyt 100.0 5.2E-27 1.1E-31 272.6 24.8 148 104-268 1-150 (267)
231 cd07851 STKc_p38 Catalytic dom 100.0 2.1E-27 4.5E-32 287.8 22.2 149 101-268 12-166 (343)
232 cd05061 PTKc_InsR Catalytic do 100.0 6.2E-27 1.3E-31 276.4 25.4 154 103-268 5-167 (288)
233 KOG0306 WD40-repeat-containing 100.0 2E-26 4.3E-31 275.2 29.4 351 1227-1620 67-620 (888)
234 cd06639 STKc_myosinIIIB Cataly 100.0 7.6E-27 1.6E-31 275.8 25.8 147 103-268 21-176 (291)
235 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3E-27 6.4E-32 277.8 22.0 147 103-268 15-169 (282)
236 cd06638 STKc_myosinIIIA Cataly 100.0 4.8E-27 1E-31 276.5 23.7 149 102-269 16-173 (286)
237 cd07864 STKc_CDK12 Catalytic d 100.0 4.4E-27 9.6E-32 279.1 23.0 150 102-268 5-164 (302)
238 cd06609 STKc_MST3_like Catalyt 99.9 5.2E-27 1.1E-31 274.6 23.0 146 104-269 1-147 (274)
239 cd05622 STKc_ROCK1 Catalytic d 99.9 1.2E-27 2.5E-32 292.9 18.2 205 103-336 42-251 (371)
240 KOG0296 Angio-associated migra 99.9 2.5E-26 5.4E-31 256.5 27.0 291 1217-1566 98-398 (399)
241 KOG0282 mRNA splicing factor [ 99.9 9E-28 2E-32 276.3 15.9 280 1217-1564 206-503 (503)
242 cd07852 STKc_MAPK15 Catalytic 99.9 3.2E-27 7E-32 285.3 21.6 148 102-268 5-155 (337)
243 KOG0603 Ribosomal protein S6 k 99.9 7E-28 1.5E-32 290.0 15.4 143 102-269 320-465 (612)
244 cd05577 STKc_GRK Catalytic dom 99.9 4E-27 8.7E-32 276.2 21.5 141 112-268 1-143 (277)
245 cd06612 STKc_MST1_2 Catalytic 99.9 6E-27 1.3E-31 270.5 22.6 145 103-268 2-147 (256)
246 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.1E-26 2.3E-31 271.5 24.8 150 105-268 2-156 (272)
247 cd06659 STKc_PAK6 Catalytic do 99.9 4.2E-27 9.1E-32 279.3 21.7 143 105-268 22-165 (297)
248 cd08226 PK_STRAD_beta Pseudoki 99.9 3.3E-27 7.1E-32 284.3 21.0 143 110-268 4-149 (328)
249 KOG0586 Serine/threonine prote 99.9 8E-28 1.7E-32 287.9 15.4 217 100-347 52-270 (596)
250 cd06658 STKc_PAK5 Catalytic do 99.9 3.2E-27 6.9E-32 279.6 20.4 144 104-268 22-166 (292)
251 cd06607 STKc_TAO Catalytic dom 99.9 1.2E-26 2.5E-31 276.7 25.3 149 103-268 14-163 (307)
252 cd05573 STKc_ROCK_NDR_like Cat 99.9 1.2E-27 2.6E-32 290.4 16.9 212 104-333 1-231 (350)
253 cd05578 STKc_Yank1 Catalytic d 99.9 4.9E-27 1.1E-31 272.1 21.0 146 105-268 1-148 (258)
254 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 9.8E-27 2.1E-31 280.2 24.2 149 101-268 7-156 (328)
255 cd06608 STKc_myosinIII_like Ca 99.9 9E-27 2E-31 271.6 23.2 148 103-269 5-162 (275)
256 cd07838 STKc_CDK4_6_like Catal 99.9 9.8E-27 2.1E-31 273.5 23.4 147 106-268 1-155 (287)
257 KOG0197 Tyrosine kinases [Sign 99.9 6.5E-28 1.4E-32 286.7 13.3 193 105-328 207-400 (468)
258 cd08217 STKc_Nek2 Catalytic do 99.9 1.8E-26 3.9E-31 267.3 24.8 148 105-268 1-158 (265)
259 cd06605 PKc_MAPKK Catalytic do 99.9 5.5E-27 1.2E-31 272.5 20.3 147 104-268 1-149 (265)
260 cd06632 STKc_MEKK1_plant Catal 99.9 1.9E-26 4.1E-31 266.5 24.5 146 105-268 1-150 (258)
261 KOG0986 G protein-coupled rece 99.9 1.3E-28 2.9E-33 282.0 6.4 207 102-336 183-390 (591)
262 cd06640 STKc_MST4 Catalytic do 99.9 1.1E-26 2.4E-31 272.4 22.9 145 104-268 4-149 (277)
263 cd05606 STKc_beta_ARK Catalyti 99.9 1.2E-26 2.7E-31 272.5 22.9 143 111-268 1-145 (278)
264 cd05624 STKc_MRCK_beta Catalyt 99.9 3.2E-27 7E-32 284.7 18.1 202 104-332 1-208 (331)
265 cd05572 STKc_cGK_PKG Catalytic 99.9 1.4E-26 3E-31 269.0 22.5 140 112-268 1-141 (262)
266 cd06633 STKc_TAO3 Catalytic do 99.9 3.6E-26 7.8E-31 273.4 26.5 151 101-268 18-169 (313)
267 KOG0612 Rho-associated, coiled 99.9 1.4E-28 3E-33 307.7 5.6 204 103-334 74-283 (1317)
268 cd08215 STKc_Nek Catalytic dom 99.9 3.9E-26 8.4E-31 263.2 25.6 148 105-268 1-151 (258)
269 cd06626 STKc_MEKK4 Catalytic d 99.9 4.6E-26 1E-30 264.4 26.2 146 105-268 1-147 (264)
270 PHA03390 pk1 serine/threonine- 99.9 1.8E-26 3.8E-31 269.6 22.7 142 103-268 13-158 (267)
271 cd07840 STKc_CDK9_like Catalyt 99.9 2.4E-26 5.2E-31 270.0 23.7 146 106-268 1-148 (287)
272 cd06624 STKc_ASK Catalytic dom 99.9 4.4E-26 9.5E-31 265.9 25.4 141 109-268 13-157 (268)
273 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.9E-26 4.1E-31 271.6 22.3 147 103-268 4-152 (284)
274 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 4.9E-26 1.1E-30 268.5 25.9 148 104-268 1-153 (287)
275 cd06642 STKc_STK25-YSK1 Cataly 99.9 8.5E-27 1.8E-31 273.3 19.2 145 104-268 4-149 (277)
276 cd05611 STKc_Rim15_like Cataly 99.9 2.2E-26 4.8E-31 267.0 22.3 141 110-268 2-145 (260)
277 cd06641 STKc_MST3 Catalytic do 99.9 3.3E-26 7.2E-31 268.4 23.9 145 104-268 4-149 (277)
278 cd05601 STKc_CRIK Catalytic do 99.9 4.7E-27 1E-31 283.1 17.1 198 104-328 1-205 (330)
279 cd06616 PKc_MKK4 Catalytic dom 99.9 1.4E-26 3.1E-31 272.9 20.8 148 104-268 4-156 (288)
280 cd05581 STKc_PDK1 Catalytic do 99.9 2.2E-26 4.8E-31 269.3 21.9 148 104-269 1-151 (280)
281 KOG0695 Serine/threonine prote 99.9 9.8E-28 2.1E-32 263.9 9.6 206 100-340 246-453 (593)
282 cd06917 STKc_NAK1_like Catalyt 99.9 3.8E-26 8.3E-31 267.6 23.8 144 105-268 2-149 (277)
283 cd05102 PTKc_VEGFR3 Catalytic 99.9 4.1E-27 8.9E-32 284.5 16.0 203 103-327 6-271 (338)
284 cd06623 PKc_MAPKK_plant_like C 99.9 3.9E-26 8.5E-31 264.8 23.6 146 104-268 1-148 (264)
285 KOG0274 Cdc4 and related F-box 99.9 6.8E-26 1.5E-30 282.6 27.2 255 1243-1566 221-482 (537)
286 cd08216 PK_STRAD Pseudokinase 99.9 2.6E-26 5.5E-31 274.4 22.6 144 107-268 5-149 (314)
287 cd06648 STKc_PAK_II Catalytic 99.9 6.2E-26 1.3E-30 267.6 25.3 143 105-268 20-163 (285)
288 cd06647 STKc_PAK_I Catalytic d 99.9 2.8E-26 6E-31 271.7 22.4 145 103-268 18-163 (293)
289 cd05118 STKc_CMGC Catalytic do 99.9 1.7E-26 3.7E-31 270.8 20.4 146 106-268 1-146 (283)
290 KOG0278 Serine/threonine kinas 99.9 1.4E-26 3E-31 246.1 17.3 278 1263-1620 8-295 (334)
291 KOG0276 Vesicle coat complex C 99.9 8.3E-26 1.8E-30 264.8 25.5 280 1263-1618 7-295 (794)
292 cd05603 STKc_SGK2 Catalytic do 99.9 7.8E-27 1.7E-31 280.1 17.5 194 110-333 1-197 (321)
293 cd05604 STKc_SGK3 Catalytic do 99.9 8.2E-27 1.8E-31 280.4 17.7 193 110-332 1-196 (325)
294 cd06635 STKc_TAO1 Catalytic do 99.9 6.6E-26 1.4E-30 271.6 25.4 149 103-268 24-173 (317)
295 cd05623 STKc_MRCK_alpha Cataly 99.9 8.1E-27 1.8E-31 281.4 17.6 202 104-332 1-208 (332)
296 KOG1290 Serine/threonine prote 99.9 4.6E-26 1E-30 263.9 22.4 135 104-255 78-225 (590)
297 cd07830 STKc_MAK_like Catalyti 99.9 3.2E-26 7E-31 268.9 21.5 146 106-268 1-147 (283)
298 KOG1187 Serine/threonine prote 99.9 1.1E-26 2.3E-31 280.1 17.8 202 103-340 74-280 (361)
299 cd05602 STKc_SGK1 Catalytic do 99.9 1E-26 2.2E-31 279.7 17.3 194 110-333 1-197 (325)
300 KOG0577 Serine/threonine prote 99.9 7.2E-28 1.6E-32 281.5 6.6 184 103-318 25-212 (948)
301 cd05618 STKc_aPKC_iota Catalyt 99.9 1.3E-26 2.9E-31 279.2 17.8 191 110-329 1-193 (329)
302 cd07829 STKc_CDK_like Catalyti 99.9 3.7E-26 8E-31 267.9 21.2 146 106-268 1-146 (282)
303 cd06634 STKc_TAO2 Catalytic do 99.9 1.1E-25 2.3E-30 268.7 24.7 149 103-268 14-163 (308)
304 cd06606 STKc_MAPKKK Catalytic 99.9 1.5E-25 3.3E-30 258.1 25.0 146 105-268 1-149 (260)
305 cd06627 STKc_Cdc7_like Catalyt 99.9 1.7E-25 3.8E-30 257.6 25.4 146 105-268 1-147 (254)
306 cd06657 STKc_PAK4 Catalytic do 99.9 8.4E-26 1.8E-30 267.5 22.9 143 105-268 21-164 (292)
307 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.8E-26 3.8E-31 277.8 17.4 194 110-332 1-196 (327)
308 KOG0300 WD40 repeat-containing 99.9 1.3E-25 2.8E-30 244.5 22.2 333 1243-1619 127-473 (481)
309 cd05579 STKc_MAST_like Catalyt 99.9 8.6E-26 1.9E-30 261.7 22.1 139 112-268 1-141 (265)
310 PLN03225 Serine/threonine-prot 99.9 6.3E-26 1.4E-30 289.5 22.6 174 102-303 130-329 (566)
311 KOG0274 Cdc4 and related F-box 99.9 3.7E-25 8.1E-30 276.0 28.9 273 1264-1620 202-480 (537)
312 cd08222 STKc_Nek11 Catalytic d 99.9 7.5E-26 1.6E-30 262.5 21.3 147 105-268 1-153 (260)
313 KOG1407 WD40 repeat protein [F 99.9 3.1E-25 6.8E-30 237.9 24.1 277 1263-1619 14-308 (313)
314 cd08530 STKc_CNK2-like Catalyt 99.9 1.8E-25 3.9E-30 258.0 23.7 148 105-268 1-151 (256)
315 KOG4250 TANK binding protein k 99.9 5E-27 1.1E-31 284.0 11.0 198 104-329 13-221 (732)
316 KOG4721 Serine/threonine prote 99.9 2.4E-27 5.2E-32 276.2 7.8 214 109-369 129-345 (904)
317 KOG0275 Conserved WD40 repeat- 99.9 1.2E-26 2.7E-31 252.8 12.7 277 1222-1564 210-507 (508)
318 PRK13184 pknD serine/threonine 99.9 5.6E-26 1.2E-30 294.2 19.9 215 103-334 1-233 (932)
319 KOG0696 Serine/threonine prote 99.9 3.6E-27 7.8E-32 265.8 7.5 207 103-338 348-556 (683)
320 KOG0604 MAP kinase-activated p 99.9 3.1E-27 6.6E-32 258.8 6.5 201 98-332 55-263 (400)
321 KOG0193 Serine/threonine prote 99.9 2.3E-26 5E-31 273.1 14.3 198 105-333 393-594 (678)
322 cd05122 PKc_STE Catalytic doma 99.9 5.8E-25 1.3E-29 252.1 25.4 145 105-268 1-146 (253)
323 cd05096 PTKc_DDR1 Catalytic do 99.9 6.3E-26 1.4E-30 269.9 17.9 204 103-327 4-235 (304)
324 cd05586 STKc_Sck1_like Catalyt 99.9 4.2E-26 9.1E-31 274.9 15.2 189 112-330 1-195 (330)
325 KOG0313 Microtubule binding pr 99.9 9.8E-25 2.1E-29 244.7 24.7 277 1267-1619 103-415 (423)
326 PHA03211 serine/threonine kina 99.9 1.5E-25 3.2E-30 279.6 20.1 190 103-327 168-357 (461)
327 cd06618 PKc_MKK7 Catalytic dom 99.9 5.2E-25 1.1E-29 261.0 23.7 148 103-268 14-163 (296)
328 cd05106 PTKc_CSF-1R Catalytic 99.9 5.2E-26 1.1E-30 278.8 15.3 202 103-326 37-308 (374)
329 KOG0664 Nemo-like MAPK-related 99.9 8.5E-28 1.8E-32 258.7 -1.1 191 103-321 52-248 (449)
330 KOG0292 Vesicle coat complex C 99.9 6E-25 1.3E-29 265.3 22.9 278 1264-1616 4-316 (1202)
331 KOG0300 WD40 repeat-containing 99.9 8.8E-25 1.9E-29 238.1 21.9 283 1218-1566 141-476 (481)
332 cd05123 STKc_AGC Catalytic dom 99.9 7E-25 1.5E-29 252.3 22.4 139 112-268 1-141 (250)
333 cd05576 STKc_RPK118_like Catal 99.9 2.6E-25 5.7E-30 254.9 18.5 129 115-268 4-133 (237)
334 cd05104 PTKc_Kit Catalytic dom 99.9 1.1E-25 2.4E-30 276.1 16.1 203 103-327 34-311 (375)
335 PLN03224 probable serine/threo 99.9 1.1E-24 2.3E-29 271.4 25.2 189 102-304 143-383 (507)
336 KOG1152 Signal transduction se 99.9 4.8E-26 1E-30 267.2 12.2 196 101-321 558-759 (772)
337 cd05064 PTKc_EphR_A10 Catalyti 99.9 2.2E-25 4.7E-30 260.0 17.2 197 103-325 4-201 (266)
338 KOG0278 Serine/threonine kinas 99.9 4.1E-25 9E-30 235.0 16.7 277 1218-1566 7-297 (334)
339 PHA03210 serine/threonine kina 99.9 1.9E-25 4E-30 283.5 16.9 199 103-327 147-363 (501)
340 KOG0268 Sof1-like rRNA process 99.9 2.7E-25 5.8E-30 247.4 15.5 279 1261-1619 58-342 (433)
341 PF00069 Pkinase: Protein kina 99.9 2.5E-25 5.5E-30 257.4 15.9 194 106-329 1-196 (260)
342 KOG0275 Conserved WD40 repeat- 99.9 1.9E-25 4E-30 243.7 13.4 276 1267-1619 211-506 (508)
343 KOG0643 Translation initiation 99.9 1.3E-23 2.7E-28 226.2 27.1 286 1220-1566 5-317 (327)
344 KOG0283 WD40 repeat-containing 99.9 1.6E-24 3.4E-29 265.6 22.6 241 1223-1526 265-577 (712)
345 cd05105 PTKc_PDGFR_alpha Catal 99.9 4.2E-25 9E-30 272.3 17.5 202 103-326 36-333 (400)
346 KOG1989 ARK protein kinase fam 99.9 1.1E-25 2.4E-30 280.8 11.8 209 104-335 37-261 (738)
347 cd08219 STKc_Nek3 Catalytic do 99.9 1.2E-24 2.5E-29 251.8 19.1 195 105-328 1-196 (255)
348 KOG0283 WD40 repeat-containing 99.9 3.2E-24 6.9E-29 262.9 23.2 241 1261-1566 258-576 (712)
349 KOG0194 Protein tyrosine kinas 99.9 3.1E-25 6.8E-30 268.3 14.3 216 105-350 158-376 (474)
350 KOG0288 WD40 repeat protein Ti 99.9 5E-25 1.1E-29 249.2 14.0 284 1260-1620 166-459 (459)
351 cd05054 PTKc_VEGFR Catalytic d 99.9 6.2E-25 1.3E-29 265.5 15.7 202 103-326 6-269 (337)
352 KOG0308 Conserved WD40 repeat- 99.9 3.3E-24 7.2E-29 253.4 21.1 324 1243-1620 40-391 (735)
353 cd05048 PTKc_Ror Catalytic Dom 99.9 7.1E-25 1.5E-29 257.6 15.1 203 103-327 4-221 (283)
354 cd05090 PTKc_Ror1 Catalytic do 99.9 1.3E-24 2.8E-29 255.7 17.3 202 103-327 4-221 (283)
355 KOG0671 LAMMER dual specificit 99.9 3.7E-25 8E-30 251.2 11.6 201 103-335 88-312 (415)
356 KOG2345 Serine/threonine prote 99.9 1.5E-25 3.3E-30 240.8 8.0 209 103-332 20-241 (302)
357 cd05108 PTKc_EGFR Catalytic do 99.9 1.4E-24 3E-29 260.0 17.1 200 103-327 6-206 (316)
358 cd05114 PTKc_Tec_Rlk Catalytic 99.9 1.5E-24 3.2E-29 251.2 16.8 191 104-326 4-195 (256)
359 cd05072 PTKc_Lyn Catalytic dom 99.9 1.2E-24 2.6E-29 252.6 16.0 194 103-327 5-199 (261)
360 cd05062 PTKc_IGF-1R Catalytic 99.9 1.9E-24 4E-29 253.5 16.8 203 103-327 5-216 (277)
361 PTZ00420 coronin; Provisional 99.9 6.1E-23 1.3E-27 256.9 31.1 246 1245-1548 49-317 (568)
362 PHA02988 hypothetical protein; 99.9 1.2E-24 2.6E-29 256.6 14.7 190 110-334 26-224 (283)
363 cd05035 PTKc_Axl_like Catalyti 99.9 2.5E-24 5.5E-29 251.1 17.2 199 106-327 1-210 (273)
364 KOG0640 mRNA cleavage stimulat 99.9 8.8E-24 1.9E-28 230.4 19.9 287 1262-1619 105-423 (430)
365 cd05049 PTKc_Trk Catalytic dom 99.9 1.9E-24 4E-29 253.5 15.8 203 103-327 4-219 (280)
366 KOG1035 eIF-2alpha kinase GCN2 99.9 3.5E-25 7.5E-30 279.7 10.1 208 100-328 475-814 (1351)
367 cd05093 PTKc_TrkB Catalytic do 99.9 3E-24 6.5E-29 253.5 17.4 202 103-327 4-217 (288)
368 cd05052 PTKc_Abl Catalytic dom 99.9 3E-24 6.6E-29 249.7 17.2 195 103-327 5-200 (263)
369 cd07850 STKc_JNK Catalytic dom 99.9 2.4E-24 5.1E-29 262.2 16.9 194 102-328 14-213 (353)
370 cd05066 PTKc_EphR_A Catalytic 99.9 3.5E-24 7.5E-29 249.9 17.3 195 104-321 4-199 (267)
371 cd05051 PTKc_DDR Catalytic dom 99.9 3E-24 6.6E-29 254.0 16.9 204 103-327 4-227 (296)
372 cd05055 PTKc_PDGFR Catalytic d 99.9 3.6E-24 7.7E-29 254.9 17.4 203 103-327 34-238 (302)
373 cd05053 PTKc_FGFR Catalytic do 99.9 5.2E-24 1.1E-28 251.7 18.7 202 103-326 11-228 (293)
374 KOG0288 WD40 repeat protein Ti 99.9 2.1E-24 4.6E-29 244.1 14.4 271 1222-1564 172-459 (459)
375 cd07870 STKc_PFTAIRE2 Catalyti 99.9 4.6E-24 1E-28 252.0 18.0 195 103-327 4-199 (291)
376 cd05068 PTKc_Frk_like Catalyti 99.9 3.6E-24 7.9E-29 248.7 16.8 194 103-327 5-199 (261)
377 cd05091 PTKc_Ror2 Catalytic do 99.9 1.6E-24 3.4E-29 254.9 13.8 203 103-327 4-221 (283)
378 KOG0614 cGMP-dependent protein 99.9 4.3E-26 9.3E-31 263.6 0.4 203 103-335 419-622 (732)
379 cd05116 PTKc_Syk Catalytic dom 99.9 3.7E-24 7.9E-29 248.2 16.4 192 110-327 1-193 (257)
380 cd05101 PTKc_FGFR2 Catalytic d 99.9 2.7E-24 5.8E-29 255.9 15.7 203 103-326 14-233 (304)
381 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 5.3E-24 1.1E-28 250.5 17.8 199 104-327 3-205 (283)
382 cd06652 STKc_MEKK2 Catalytic d 99.9 5.6E-24 1.2E-28 247.7 17.6 196 104-326 2-203 (265)
383 cd05033 PTKc_EphR Catalytic do 99.9 6.2E-24 1.3E-28 247.5 17.7 195 103-321 3-198 (266)
384 cd08228 STKc_Nek6 Catalytic do 99.9 5E-24 1.1E-28 248.1 16.8 195 104-326 2-200 (267)
385 cd05103 PTKc_VEGFR2 Catalytic 99.9 3.9E-24 8.5E-29 259.2 16.4 202 103-326 6-275 (343)
386 cd05059 PTKc_Tec_like Catalyti 99.9 3.4E-24 7.5E-29 248.2 15.2 191 104-326 4-195 (256)
387 cd05042 PTKc_Aatyk Catalytic d 99.9 4E-24 8.7E-29 249.5 15.8 193 110-327 1-204 (269)
388 cd05071 PTKc_Src Catalytic dom 99.9 4.4E-24 9.5E-29 248.5 16.0 193 103-327 5-198 (262)
389 cd05098 PTKc_FGFR1 Catalytic d 99.9 5.8E-24 1.3E-28 253.5 17.0 204 103-327 17-237 (307)
390 cd05094 PTKc_TrkC Catalytic do 99.9 8.4E-24 1.8E-28 250.0 18.2 202 103-327 4-220 (291)
391 cd05113 PTKc_Btk_Bmx Catalytic 99.9 5.1E-24 1.1E-28 247.1 15.9 192 103-326 3-195 (256)
392 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 4.7E-24 1E-28 247.6 15.6 193 103-327 5-198 (260)
393 cd05032 PTKc_InsR_like Catalyt 99.9 7E-24 1.5E-28 248.3 17.2 202 103-326 5-215 (277)
394 cd05084 PTKc_Fes Catalytic dom 99.9 5.9E-24 1.3E-28 245.5 16.3 190 110-327 1-191 (252)
395 PTZ00421 coronin; Provisional 99.9 4.9E-22 1.1E-26 248.0 34.6 226 1243-1528 35-293 (493)
396 cd05148 PTKc_Srm_Brk Catalytic 99.9 3.2E-24 6.9E-29 248.9 13.8 193 103-326 5-198 (261)
397 cd05088 PTKc_Tie2 Catalytic do 99.9 6.7E-24 1.4E-28 252.6 16.9 197 103-327 6-218 (303)
398 cd05107 PTKc_PDGFR_beta Cataly 99.9 6E-24 1.3E-28 261.9 16.7 203 103-327 36-336 (401)
399 cd06613 STKc_MAP4K3_like Catal 99.9 1.1E-23 2.4E-28 244.1 18.0 195 103-328 2-200 (262)
400 cd05075 PTKc_Axl Catalytic dom 99.9 6.8E-24 1.5E-28 247.7 16.1 197 107-327 2-209 (272)
401 cd05034 PTKc_Src_like Catalyti 99.9 7.6E-24 1.7E-28 245.7 16.3 194 103-327 5-199 (261)
402 KOG1151 Tousled-like protein k 99.9 1E-24 2.2E-29 247.6 8.2 214 103-333 462-685 (775)
403 KOG0294 WD40 repeat-containing 99.9 7.7E-23 1.7E-27 224.9 22.6 240 1219-1528 37-284 (362)
404 cd05065 PTKc_EphR_B Catalytic 99.9 1.4E-23 3E-28 244.9 18.0 202 103-326 3-205 (269)
405 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.1E-23 2.4E-28 248.1 17.3 199 105-326 5-206 (284)
406 cd05067 PTKc_Lck_Blk Catalytic 99.9 9.4E-24 2E-28 245.1 16.4 193 103-327 5-198 (260)
407 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.2E-23 2.6E-28 247.5 17.5 201 103-327 3-206 (284)
408 cd05089 PTKc_Tie1 Catalytic do 99.9 1.2E-23 2.7E-28 249.5 17.5 195 104-326 2-212 (297)
409 KOG1446 Histone H3 (Lys4) meth 99.9 1.4E-21 3E-26 216.6 32.3 275 1225-1565 14-302 (311)
410 cd05111 PTK_HER3 Pseudokinase 99.9 1.1E-23 2.3E-28 247.7 16.7 200 103-327 6-206 (279)
411 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.1E-23 2.3E-28 252.2 16.9 204 103-327 11-231 (314)
412 cd05109 PTKc_HER2 Catalytic do 99.9 1.1E-23 2.4E-28 247.3 16.6 200 103-327 6-206 (279)
413 cd05095 PTKc_DDR2 Catalytic do 99.9 1.1E-23 2.4E-28 249.6 16.9 203 104-327 5-227 (296)
414 KOG0584 Serine/threonine prote 99.9 7.5E-25 1.6E-29 262.6 6.7 190 109-336 45-241 (632)
415 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.7E-23 3.7E-28 243.3 18.0 196 104-327 2-201 (267)
416 cd08229 STKc_Nek7 Catalytic do 99.9 8.2E-24 1.8E-28 246.3 15.1 201 104-332 2-206 (267)
417 cd05045 PTKc_RET Catalytic dom 99.9 1.2E-23 2.5E-28 248.6 16.4 201 105-327 1-224 (290)
418 cd05115 PTKc_Zap-70 Catalytic 99.9 1.4E-23 2.9E-28 243.7 16.6 190 111-326 2-192 (257)
419 KOG1026 Nerve growth factor re 99.9 2.3E-24 4.9E-29 267.6 10.5 196 105-321 487-695 (774)
420 cd06653 STKc_MEKK3_like_1 Cata 99.9 1.8E-23 4E-28 243.3 17.6 197 104-327 2-204 (264)
421 cd05057 PTKc_EGFR_like Catalyt 99.9 1.2E-23 2.5E-28 247.1 15.9 200 103-327 6-206 (279)
422 cd07833 STKc_CDKL Catalytic do 99.9 1.5E-23 3.3E-28 246.7 16.9 196 104-327 1-197 (288)
423 KOG0277 Peroxisomal targeting 99.9 7.1E-23 1.5E-27 219.1 20.1 256 1249-1564 37-307 (311)
424 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.6E-23 3.4E-28 244.2 16.8 199 104-326 5-204 (268)
425 KOG1094 Discoidin domain recep 99.9 1.2E-23 2.6E-28 247.2 15.6 196 105-328 539-735 (807)
426 KOG0277 Peroxisomal targeting 99.9 9.9E-23 2.1E-27 218.0 21.1 279 1273-1620 12-307 (311)
427 KOG0587 Traf2- and Nck-interac 99.9 1.7E-23 3.6E-28 257.6 17.4 198 102-336 17-226 (953)
428 KOG0268 Sof1-like rRNA process 99.9 2.4E-23 5.2E-28 231.9 17.0 282 1218-1568 59-347 (433)
429 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 1.7E-23 3.7E-28 244.3 16.8 192 110-326 1-203 (269)
430 cd05073 PTKc_Hck Catalytic dom 99.9 2E-23 4.3E-28 242.5 17.3 193 103-327 5-198 (260)
431 KOG0984 Mitogen-activated prot 99.9 2.8E-24 6.1E-29 224.8 8.9 197 103-335 45-249 (282)
432 cd05036 PTKc_ALK_LTK Catalytic 99.9 1.3E-23 2.9E-28 246.4 15.9 204 103-326 5-215 (277)
433 KOG0310 Conserved WD40 repeat- 99.9 1.2E-22 2.5E-27 235.0 23.0 272 1268-1618 25-305 (487)
434 cd05092 PTKc_TrkA Catalytic do 99.9 2E-23 4.4E-28 245.3 16.9 200 104-326 5-218 (280)
435 KOG0289 mRNA splicing factor [ 99.9 1.8E-22 4E-27 229.3 23.5 265 1242-1565 233-505 (506)
436 cd05069 PTKc_Yes Catalytic dom 99.9 2.2E-23 4.8E-28 242.0 16.8 193 103-327 5-198 (260)
437 PHA02882 putative serine/threo 99.9 2.8E-23 6.1E-28 246.2 18.0 214 103-328 11-229 (294)
438 cd05082 PTKc_Csk Catalytic dom 99.9 1.3E-23 2.9E-28 243.2 14.8 187 103-326 5-193 (256)
439 cd05097 PTKc_DDR_like Catalyti 99.9 1.6E-23 3.6E-28 248.1 15.8 203 103-326 4-225 (295)
440 KOG0301 Phospholipase A2-activ 99.9 1.2E-22 2.6E-27 242.2 22.9 272 1218-1566 7-288 (745)
441 cd05040 PTKc_Ack_like Catalyti 99.9 2.5E-23 5.3E-28 240.9 16.6 193 110-326 1-194 (257)
442 cd05039 PTKc_Csk_like Catalyti 99.9 1.5E-23 3.3E-28 242.6 14.3 188 103-326 5-193 (256)
443 KOG1446 Histone H3 (Lys4) meth 99.9 2.5E-21 5.5E-26 214.6 30.9 277 1263-1619 8-300 (311)
444 cd05085 PTKc_Fer Catalytic dom 99.9 3.7E-23 8.1E-28 238.3 17.1 187 110-326 1-188 (250)
445 PF07714 Pkinase_Tyr: Protein 99.9 3.3E-23 7.1E-28 241.0 16.6 198 107-327 2-200 (259)
446 KOG0670 U4/U6-associated splic 99.9 3.3E-24 7.1E-29 248.7 7.9 205 104-340 432-643 (752)
447 KOG0301 Phospholipase A2-activ 99.9 2.3E-22 5E-27 239.8 23.7 271 1261-1619 6-285 (745)
448 cd05100 PTKc_FGFR3 Catalytic d 99.9 4E-23 8.7E-28 249.4 17.6 203 104-327 12-231 (334)
449 KOG0973 Histone transcription 99.9 6.1E-22 1.3E-26 248.2 28.1 283 1222-1566 9-355 (942)
450 KOG0196 Tyrosine kinase, EPH ( 99.9 8.8E-24 1.9E-28 255.8 11.2 229 105-363 630-862 (996)
451 cd00192 PTKc Catalytic domain 99.9 4.6E-23 9.9E-28 238.2 16.8 194 110-327 1-202 (262)
452 cd05046 PTK_CCK4 Pseudokinase 99.9 3.6E-23 7.7E-28 242.2 15.8 197 103-321 4-208 (275)
453 KOG0289 mRNA splicing factor [ 99.9 5.4E-22 1.2E-26 225.6 24.6 278 1270-1619 220-503 (506)
454 cd05086 PTKc_Aatyk2 Catalytic 99.9 4.5E-23 9.7E-28 240.8 16.6 192 110-326 1-202 (268)
455 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 2.9E-23 6.3E-28 241.7 14.7 190 110-326 1-203 (262)
456 cd05050 PTKc_Musk Catalytic do 99.9 4E-23 8.7E-28 243.7 16.0 202 103-326 4-226 (288)
457 PTZ00420 coronin; Provisional 99.9 3.7E-21 7.9E-26 241.0 34.3 246 1294-1604 53-318 (568)
458 cd05112 PTKc_Itk Catalytic dom 99.9 5.5E-23 1.2E-27 237.8 16.8 191 104-326 4-195 (256)
459 cd05060 PTKc_Syk_like Catalyti 99.9 5.3E-23 1.2E-27 238.3 16.6 191 110-326 1-192 (257)
460 KOG1095 Protein tyrosine kinas 99.9 2.3E-23 4.9E-28 267.6 14.7 218 104-347 692-915 (1025)
461 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 2.9E-23 6.4E-28 243.4 14.5 188 111-325 2-214 (274)
462 PTZ00421 coronin; Provisional 99.9 3E-21 6.4E-26 241.0 33.1 244 1268-1566 19-290 (493)
463 KOG0983 Mitogen-activated prot 99.9 6.1E-24 1.3E-28 230.2 7.9 211 103-350 91-308 (391)
464 KOG0641 WD40 repeat protein [G 99.9 6E-21 1.3E-25 200.0 29.8 276 1230-1566 39-349 (350)
465 cd05083 PTKc_Chk Catalytic dom 99.9 4.7E-23 1E-27 238.3 15.2 186 103-326 5-191 (254)
466 KOG0640 mRNA cleavage stimulat 99.9 1.7E-22 3.8E-27 220.4 18.3 285 1218-1564 105-424 (430)
467 cd05613 STKc_MSK1_N N-terminal 99.9 6.9E-23 1.5E-27 241.9 16.7 197 105-327 1-203 (290)
468 cd05074 PTKc_Tyro3 Catalytic d 99.9 6.7E-23 1.4E-27 239.5 16.3 198 106-326 1-209 (273)
469 smart00219 TyrKc Tyrosine kina 99.9 7.9E-23 1.7E-27 236.1 16.7 197 106-326 1-198 (258)
470 cd05041 PTKc_Fes_like Catalyti 99.9 8.6E-23 1.9E-27 235.4 16.3 189 110-327 1-190 (251)
471 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 7.6E-23 1.7E-27 240.1 16.1 196 104-321 4-202 (284)
472 cd05058 PTKc_Met_Ron Catalytic 99.9 9.2E-23 2E-27 236.8 16.6 194 110-326 1-196 (262)
473 cd05047 PTKc_Tie Catalytic dom 99.9 6.2E-23 1.3E-27 239.8 15.2 189 110-326 1-205 (270)
474 cd05056 PTKc_FAK Catalytic dom 99.9 1E-22 2.2E-27 237.8 17.0 198 103-327 5-203 (270)
475 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 2.6E-23 5.7E-28 241.3 11.9 191 110-327 1-200 (258)
476 KOG0308 Conserved WD40 repeat- 99.9 9E-23 2E-27 241.4 16.2 243 1268-1567 20-286 (735)
477 cd05043 PTK_Ryk Pseudokinase d 99.9 1E-22 2.3E-27 239.0 16.9 201 103-326 5-213 (280)
478 KOG0772 Uncharacterized conser 99.9 7.8E-22 1.7E-26 227.7 23.3 307 1255-1619 153-484 (641)
479 cd05110 PTKc_HER4 Catalytic do 99.9 8.4E-23 1.8E-27 243.1 15.8 200 103-327 6-206 (303)
480 KOG1063 RNA polymerase II elon 99.9 1.4E-21 3E-26 232.9 25.4 333 1218-1619 184-645 (764)
481 KOG0647 mRNA export protein (c 99.9 2E-21 4.3E-26 212.9 24.4 266 1267-1610 25-311 (347)
482 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 1.5E-22 3.2E-27 234.3 15.0 188 110-326 1-200 (259)
483 KOG1539 WD repeat protein [Gen 99.9 1.9E-20 4.2E-25 227.1 32.9 349 1228-1619 162-645 (910)
484 KOG0647 mRNA export protein (c 99.9 4E-21 8.6E-26 210.5 24.3 262 1226-1556 28-312 (347)
485 KOG0305 Anaphase promoting com 99.9 2.6E-21 5.6E-26 233.1 24.9 258 1243-1566 191-461 (484)
486 KOG0310 Conserved WD40 repeat- 99.9 1.4E-21 3.1E-26 226.1 21.7 259 1230-1559 33-301 (487)
487 KOG0299 U3 snoRNP-associated p 99.9 3E-21 6.4E-26 221.8 23.6 280 1219-1567 136-457 (479)
488 cd05044 PTKc_c-ros Catalytic d 99.9 1.9E-22 4.1E-27 235.1 13.9 199 110-327 1-208 (269)
489 cd05583 STKc_MSK_N N-terminal 99.9 3.6E-22 7.7E-27 235.6 15.7 196 105-326 1-202 (288)
490 KOG0973 Histone transcription 99.9 9.4E-21 2E-25 237.6 28.2 296 1268-1619 12-352 (942)
491 KOG1006 Mitogen-activated prot 99.9 9.7E-24 2.1E-28 228.2 1.2 197 103-335 63-266 (361)
492 KOG0299 U3 snoRNP-associated p 99.9 1.1E-20 2.4E-25 217.2 24.5 278 1262-1614 135-448 (479)
493 KOG0199 ACK and related non-re 99.9 1.6E-22 3.4E-27 241.3 9.7 201 103-327 109-310 (1039)
494 KOG4257 Focal adhesion tyrosin 99.9 3.4E-22 7.3E-27 235.8 11.9 207 106-338 391-599 (974)
495 KOG0641 WD40 repeat protein [G 99.9 1.1E-19 2.3E-24 190.7 29.1 294 1261-1620 25-347 (350)
496 cd06614 STKc_PAK Catalytic dom 99.9 1.2E-21 2.6E-26 230.9 16.5 193 103-327 18-211 (286)
497 KOG2096 WD40 repeat protein [G 99.9 2.1E-20 4.6E-25 205.2 24.6 293 1262-1619 79-399 (420)
498 KOG1407 WD40 repeat protein [F 99.9 2E-20 4.3E-25 201.3 23.5 268 1221-1559 16-294 (313)
499 KOG2052 Activin A type IB rece 99.9 6.1E-22 1.3E-26 228.3 12.4 211 102-350 209-441 (513)
500 KOG0650 WD40 repeat nucleolar 99.9 1.8E-20 3.9E-25 219.8 24.0 325 1261-1620 392-733 (733)
No 1
>cd06071 Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins.
Probab=100.00 E-value=5.7e-67 Score=591.55 Aligned_cols=233 Identities=40% Similarity=0.677 Sum_probs=205.8
Q ss_pred cccccccccchHHHHhhhhcccCCCCCCCcCCcccceee-ccCCC-CCCCCCCCCCCCCccHHhhhccccccc-cc----
Q 000355 312 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLD-FT---- 384 (1620)
Q Consensus 312 ~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdlsk~~~~~~~~~~~~~-~~---- 384 (1620)
+++|..|+||||||||.||.++||+++|++||||||||+ ||.++ .|++++..||||+||||++++++.+.. .+
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~sGRSf~D~sqYPIfPWvi~dy~s~~ldl~~~~~~RDLskpigal~~~r~~~~~~~~~~~ 80 (275)
T cd06071 1 TKKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKPIGALNKERLQLLKERYESD 80 (275)
T ss_pred CchhhcCCccHHHHHHHHHHHhCCCCCCcccCCccCeeecCCCCcccccCCcccccCCCCchhhcCHHHHHHHHHHHhhh
Confidence 468999999999999999999999999999999999999 88776 488999999999999999998776542 22
Q ss_pred ccCCCCCCccCccccccceeeecccccCchHHHHHHhhccc-C-CCCccchHHHhh----c--CCCCccccCcccCCccc
Q 000355 385 YSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY-E-PNEYPSTMQRLY----Q--WTPDECIPEFYCDPQIF 456 (1620)
Q Consensus 385 ~~~~~~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~~-~-~~~~~~~~~~~~----~--~~~~eliPef~~~p~~~ 456 (1620)
....+.|+||+++|+++++|++||+|++|||.+++.+++++ + +++.+.++...+ . ++++|||||||++||||
T Consensus 81 ~~~~~~~~~y~shyS~~~~V~~yLvR~ePft~~~~~lq~g~fd~~~RlF~si~~~~~~~~~~~~d~~ELIPEFf~~Pe~f 160 (275)
T cd06071 81 SDDSDPPFHYGSHYSNPAIVLYYLVRLEPFTTLHLSLQGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFF 160 (275)
T ss_pred cccCCCCCCCCCCCCCHHHHHHHHhHcCCccHHHHHHhcCCcCCcccchhhHHHHHHHHHccCCCcccCCchHhcCHHHH
Confidence 23457899999999999999999999999999999988763 3 466666665544 3 78999999999999999
Q ss_pred ccCCC---------CCCCcccCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCC
Q 000355 457 YSQHP---------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTK 527 (1620)
Q Consensus 457 ~~~~~---------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~nv~~~~~~~~~ 527 (1620)
+|.+. .++||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++..
T Consensus 161 ~N~n~~~lg~~~g~~~~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~ 240 (275)
T cd06071 161 LNINKFDFGKQDGEKVNDVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTYEGS 240 (275)
T ss_pred hCCCcccccccCCCcccceecCCCcCCHHHHHHHHHHHHcccHhhhhhhhhhhhhcccccCCHHHHHhcCCCcccccCCc
Confidence 99763 389999999999999999999999999999999999999999999999999999999999886531
Q ss_pred ----------------cccCC--cccccCCCCCCC
Q 000355 528 ----------------PKSVG--RLQLFTQPHPVR 544 (1620)
Q Consensus 528 ----------------~~~~g--~~qlf~~pHp~r 544 (1620)
...+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 275 (275)
T cd06071 241 VDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275 (275)
T ss_pred cccchhhHHHHHHHHHHHhcCCCcchhccCCCCCC
Confidence 23456 899999999998
No 2
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.9e-65 Score=582.54 Aligned_cols=714 Identities=22% Similarity=0.327 Sum_probs=513.0
Q ss_pred cccccccCcCChhhHHH--HHHHHHHHHHhcChHHHHHhhHHHHHHhhccCC--------------------------C-
Q 000355 803 YCLPLVATPLSDAEAEC--AYVLLKEFIKCLSPKAVRTMILPAIQKILQTTG--------------------------Y- 853 (1620)
Q Consensus 803 ~~l~~~~~~~~~~~~~~--~~~l~~~~~~~l~~~~t~~~ll~~~~~l~~~~~--------------------------~- 853 (1620)
..+||+++++.++++.+ ||.||+|+++++|...||++|+.++.|+|+.++ +
T Consensus 8 lL~PHi~dl~~De~~~il~a~~lfdpIa~algvsqtqqhL~~~L~kl~dvesv~~Pddggsngstd~~~~l~Fsasssfk 87 (1034)
T KOG4190|consen 8 LLAPHIADLFDDEDHIILCAQLLFDPIAAALGVSQTQQHLFDFLFKLEDVESVDFPDDGGSNGSTDCDEFLFFSASSSFK 87 (1034)
T ss_pred HhhhhHHhhccChhHHHHHHHHhcchhHHHhcccHHHHHHHHHHhhhhccccccCCcccCcCCCcCCCceeEEeeccccc
Confidence 56788999999998887 999999999999999999999999999998422 3
Q ss_pred CccEEEeehhhHHHHHHHHHhHHHHhhh-ccccee------------ehhcc------------------------CC--
Q 000355 854 SHLKVSLLQDSFVREIWNRIGKQAYLEM-VHPLVI------------SNLYA------------------------AP-- 894 (1620)
Q Consensus 854 ~~~~~~l~~~~~~~~~~~~~g~~~~~~~-~~~~~~------------~~~~~------------------------~~-- 894 (1620)
+++.||||||+||++||||||++|||+| |.||++ +++|| +|
T Consensus 88 srksvklyhhsfllrliVRfgi~cfihhFiapliEa~Ggykepeqgngyhyhsggsrrtsknl~~aSe~elhk~dVaPe~ 167 (1034)
T KOG4190|consen 88 SRKSVKLYHHSFLLRLIVRFGIPCFIHHFIAPLIEAFGGYKEPEQGNGYHYHSGGSRRTSKNLKCASEHELHKLDVAPEF 167 (1034)
T ss_pred cccchhhhhhhhhhhheeeecCchhhhhhhhHHHHHhcCcCCcccCCccccccCcccccccccccchHhHhhhhccCCCc
Confidence 6889999999999999999999999999 999999 45555 22
Q ss_pred ---------------CC------Chhhhh--------------------hhhhc-----c--c-----------------
Q 000355 895 ---------------HK------SSASAA--------------------SVLLI-----G--S----------------- 909 (1620)
Q Consensus 895 ---------------~~------~~~~~~--------------------~~~~~-----~--~----------------- 909 (1620)
++ .+++++ ....| | .
T Consensus 168 k~dieeif~fEddhdkaS~qd~~~id~~dm~~~~~aa~aEEA~e~dg~pdklVIneliygarispdklSLkeS~~~~ai~ 247 (1034)
T KOG4190|consen 168 KKDIEEIFLFEDDHDKASIQDCDHIDQCDMAAFQQAAEAEEACEQDGHPDKLVINELIYGARISPDKLSLKESALEDAIN 247 (1034)
T ss_pred CcchhhheeeccccchhhhhhchhHHHHhhHHHHhhhhhHHHHhhcCCCcchhhhhhhhccccCccccccchhhCccccc
Confidence 01 112221 00011 0 0
Q ss_pred -------ccccCCC--ee------------------Eeeeh--------------------------------hh-----
Q 000355 910 -------SEELGVP--IT------------------VHQTI--------------------------------LP----- 925 (1620)
Q Consensus 910 -------~~~~~~~--~~------------------~~~~~--------------------------------~~----- 925 (1620)
||.|.|| .| .|+.+ .|
T Consensus 248 pppigprsP~IEi~m~~TaggirrsfqlsaidcdigsrksVd~fDli~~a~eqi~p~aee~eaeasdslqasvi~~isEA 327 (1034)
T KOG4190|consen 248 PPPIGPRSPMIEIIMCETAGGIRRSFQLSAIDCDIGSRKSVDLFDLIFLAHEQICPGAEEFEAEASDSLQASVIPPISEA 327 (1034)
T ss_pred CCCCCCCCCeeEeeecccccccccccccccccccccccccchHHHHHHHhhhccCCchhhHHHHhhhhcccccCCcHHHH
Confidence 1122222 01 01001 00
Q ss_pred ------------------hhhhccC---------------CCCCCc----------------------------------
Q 000355 926 ------------------LIQCFGR---------------GICPDG---------------------------------- 938 (1620)
Q Consensus 926 ------------------l~~~~~~---------------~~~~~~---------------------------------- 938 (1620)
|.||+|| .+||.|
T Consensus 328 ~A~~N~~iSemaaESi~WLahRlGPVi~akFIsrNlLkilalCY~~~E~l~~E~ddggssfnsspdaanl~~Fnia~a~v 407 (1034)
T KOG4190|consen 328 CASMNCDISEMAAESIMWLAHRLGPVICAKFISRNLLKILALCYEAFEMLGLEQDDGGSSFNSSPDAANLAVFNIALAGV 407 (1034)
T ss_pred HhhhcCcHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHhCcccCCCCccccCCcchhhhhhhhhhhhcc
Confidence 6899999 256654
Q ss_pred ---------chhhhhhhhcccchhhHHhHhhhhHHHhhcccccCCCCCCCCcccchhHHHHHHHhhhcccccccchHHHH
Q 000355 939 ---------IDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVV 1009 (1620)
Q Consensus 939 ---------~~~l~~i~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1009 (1620)
.|||+.||++|||+||+.|||||+++||..|. +|++..+ |+|+|+.+++++++||+|+|..+|
T Consensus 408 vgD~saaRi~ecLm~IaalYgenFillQ~fP~~sdLI~lc~--KRisg~L------EgaiiSs~qil~~mipclsDa~iM 479 (1034)
T KOG4190|consen 408 VGDESAARIEECLMEIAALYGENFILLQFFPFCSDLIELCH--KRISGQL------EGAIISSFQILELMIPCLSDAQIM 479 (1034)
T ss_pred ccchhHHHHHHHHHHHHHHhcchhhhhhhhHHHHHHHHHHh--hhccccc------chhhhhHHHHHHHhccccchHHHH
Confidence 89999999999999999999999999999999 4888855 999999999999999999999999
Q ss_pred HHHhhhhhh-----HHHHHhhccCcchhHHHHHHHH--------HHHHHHHhChhhHHHhhh-HHHHHHHhHhhcccccc
Q 000355 1010 KELIEDRSC-----LHVMVLMHTNLEITVLQVAAST--------LMAICQRIGPDLTALHVL-PHLKELFDELAFSQECS 1075 (1620)
Q Consensus 1010 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~g~~~~~~~~~-~~~~~~f~~~~~~~~~~ 1075 (1620)
|.||++++ |...+|++||+.||++++..+. |++|++|||.||||+|.+ |.|.+|| +.|+++++
T Consensus 480 -ehlqhimldaillpilrllsstnlvmpsgylg~~~ia~Kf~dai~ais~kiGsdmTReh~cQPllnpFf--LiFnkaf~ 556 (1034)
T KOG4190|consen 480 -EHLQHIMLDAILLPILRLLSSTNLVMPSGYLGEEFIAQKFCDAIHAISQKIGSDMTREHACQPLLNPFF--LIFNKAFE 556 (1034)
T ss_pred -HHHHHHhhhhhhhhHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHhcchhhHHHhcCccccchh--hhhhhhcC
Confidence 88888766 4445599999999999887754 899999999999999999 9999999 99998777
Q ss_pred cCCCCC---CCCcccCCCC-CCCccchhchh----hhHHHHhHHHHHhhhhHHHHHHhhhHHHHHHHHHHHcCCcccccc
Q 000355 1076 DESGSL---GGSLKVPKPK-VDGESQIESRM----DLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTG 1147 (1620)
Q Consensus 1076 ~~~~~~---~~~~~~~~~~-~~~~~~~~~~~----~~~~~~y~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1147 (1620)
..+..- -.++..-.|. +.|.+..|.|. +++...|..|++.+|...|.+.|.+-.++ +..||+.+++...
T Consensus 557 ip~tD~acdlanlsligga~qPera~eeL~dVfg~ela~~a~~~F~k~lGea~lkr~~~dl~Fl---i~~cheheqpngq 633 (1034)
T KOG4190|consen 557 IPETDEACDLANLSLIGGAKQPERAEEELFDVFGLELAEDAVDKFAKELGEAFLKRFCDDLAFL---IPFCHEHEQPNGQ 633 (1034)
T ss_pred CCCcchhhhhcchhhcccccCchhhHHHHHhcccHHHHHHHHHHHHHHhchHHHHhhccChhhe---ehhhccccCCCCC
Confidence 544111 1122222333 44667777664 88999999999999999999999999998 8999988874311
Q ss_pred CCccccccccccCccccCCCCccccCccch-hcccccccccccccccc-----cCCCcccccccccccchhhhhhccccc
Q 000355 1148 ESSRISEENISAKRPLLNKGSTSQCNPAKL-LLNGVGWSIPQSQGSRS-----SKNLIPQRRVYDYHKSSVERQEATSNL 1221 (1620)
Q Consensus 1148 ~~~~~~~~~~da~r~~~~~~~~~~~~p~q~-y~s~l~~~~~~s~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~l 1221 (1620)
+.. .-|..+-....+..-.+.-.. ..+.+|- +..+.|. ....+.+..++.+.|.|..+|.....+
T Consensus 634 ~k~------qiA~n~~sgqdvdsvdasce~faAnSfG~---~i~GNRL~~ar~n~elisdm~a~~Ldqmp~~~hlkGn~l 704 (1034)
T KOG4190|consen 634 PKA------QIAHNPPSGQDVDSVDASCEAFAANSFGG---MISGNRLFSARANSELISDMSAGGLDQMPFCDHLKGNLL 704 (1034)
T ss_pred CCc------ccccCCCCccccccccchhhhhhhhcccc---eeecceeeeeccCCccchhhhhcCccccccccccccchH
Confidence 111 111111111111111000001 1111221 1122222 223345666677788887777554222
Q ss_pred ccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEE
Q 000355 1222 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1299 (1620)
Q Consensus 1222 ~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrL 1299 (1620)
.||+ .+.+ .+...-++++...+..+.||++.|+.++--.+++.++|+|. |+||++
T Consensus 705 -----A~W~~ets~~--------------e~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASk----DKTVKL 761 (1034)
T KOG4190|consen 705 -----AVWCAETSAA--------------ECDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASK----DKTVKL 761 (1034)
T ss_pred -----HHHHhhhhHh--------------hcCCcccccceeeeecccCcHHHhHHHHhcccccceeeccC----CceEEE
Confidence 2333 1111 11122244455578889999999999999999999999998 999999
Q ss_pred EeCC-------CCeEEEEEecCCcceeEEEEeeCCCeEEEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccc
Q 000355 1300 WELT-------RINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1372 (1620)
Q Consensus 1300 Wdl~-------tg~~l~~l~gH~~~V~sV~f~~~~~~laS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~ 1372 (1620)
|+++ |..|..+++.|+.+|+++.|..+.+.++||||.|++||.--|+.+.........
T Consensus 762 WSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~--------------- 826 (1034)
T KOG4190|consen 762 WSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKE--------------- 826 (1034)
T ss_pred EEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCccc---------------
Confidence 9974 456899999999999999999999999999999999999888776533211100
Q ss_pred ccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE-EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEee
Q 000355 1373 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV-GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1451 (1620)
Q Consensus 1373 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las-gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~ 1451 (1620)
.-.+.| .|+.- -+...+++ ++...+|+++|.+.++.+..|+..... +-...+++++.
T Consensus 827 ----------~a~~~i----------kcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaV 884 (1034)
T KOG4190|consen 827 ----------GAGGNI----------KCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAV 884 (1034)
T ss_pred ----------CCCcee----------Eeccc-CcchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEe
Confidence 000111 11110 02234444 477899999999999999888865433 23456777776
Q ss_pred eCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEE-EECCCCCCC
Q 000355 1452 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRI-WDLRRNWPS 1530 (1620)
Q Consensus 1452 ~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~I-WDl~~~~~~ 1530 (1620)
. +.|+++|+|-++|+|.+.|.|+|+.+..|+........++.|.++.|++...|.++.+ |...++ .
T Consensus 885 a-----------~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldg--i 951 (1034)
T KOG4190|consen 885 A-----------DKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDG--I 951 (1034)
T ss_pred c-----------cCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCC--e
Confidence 4 6789999999999999999999999999998888888888888899999999999999 988776 2
Q ss_pred CCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEE
Q 000355 1531 QPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLV 1609 (1620)
Q Consensus 1531 ~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLas 1609 (1620)
.....+....+..-+..-|.-|+++.... ++||.=.. . .......+|+.. ....++.++++..|.+..++.
T Consensus 952 mh~q~kpppepahflqsvgpSLV~a~~Gn~lgVYad~a--~--~ha~stitKiR~----d~f~G~lTala~LPLN~afLa 1023 (1034)
T KOG4190|consen 952 MHLQDKPPPEPAHFLQSVGPSLVTAQNGNILGVYADSA--E--LHAESTITKIRP----DEFPGTLTALAPLPLNCAFLA 1023 (1034)
T ss_pred eeeccCCCCcchhhhhccCceeEEeccCcEEEEEecch--h--hhhhhhhccccc----cccCCccceeeeccccchhhc
Confidence 22344444444444555677888887666 89986221 1 111112334432 246788999999999999999
Q ss_pred EeCCCcEEEcC
Q 000355 1610 GTEDGYLRLCC 1620 (1620)
Q Consensus 1610 gs~DG~IrlWd 1620 (1620)
|.+.|.|++.|
T Consensus 1024 Gne~G~IaLlC 1034 (1034)
T KOG4190|consen 1024 GNEHGAIALLC 1034 (1034)
T ss_pred cCCCCceeecC
Confidence 99999999977
No 3
>PF02138 Beach: Beige/BEACH domain; InterPro: IPR000409 The BEACH domain is found in eukaryotic proteins that have diverse cellular functions ranging from lysosomal traffic to apoptosis and cytokinesisin vesicle trafficking, membrane dynamics, and receptor signaling. The name BEACH is derived from beige and Chediak-Higashi syndrome (CHS). CHS is a rare, autosomal recessive disorder that can cause severe immunodeficiency and albinism in humans and other mammals, and beige is the name for the CHS disease in mice [, ]. The BEACH domain was first described in the lysosomal-trafficking regulators Beige protein and its human homologue CHS protein Q99698 from SWISSPROT. It is also found in distantly related proteins like, for example, the FAN proteins O35242 from SWISSPROT and Q92636 from SWISSPROT which are factor associated with neutral sphingomyelinase activation []. It has also been described in Dictyostelium proteins Lvs []. The BEACH domain is usually followed by a series of WD repeats (PDOC00574 from PROSITEDOC). The function of the BEACH domain is unknown.; PDB: 1MI1_B 1T77_C.
Probab=100.00 E-value=3.8e-65 Score=578.32 Aligned_cols=233 Identities=40% Similarity=0.674 Sum_probs=160.3
Q ss_pred cccccccccchHHHHhhhhcccCCCCCCCcCCcccceee-ccCCC-CCCCCCCCCCCCCccHHhhhcccc-ccccccc--
Q 000355 312 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDE-QLDFTYS-- 386 (1620)
Q Consensus 312 ~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdlsk~~~~~~~~~~-~~~~~~~-- 386 (1620)
+++|..|+||||||||.+|.++||+++|++||||||||+ ||.++ .|++++..||||+||||++++... ++..+|.
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~aGRSf~D~sqYPIFPWv~~dy~s~~ldl~~~~~~RdLskPiga~~~~r~~~~~~~~~~~ 80 (270)
T PF02138_consen 1 TEKWQNGEISNFEYLMYLNILAGRSFNDLSQYPIFPWVISDYDSEELDLNDPSNYRDLSKPIGAQNEERLEKLKERYEEM 80 (270)
T ss_dssp HHHHHTTSS-HHHHHHHHHHHCT--TT-GGG---B---B---SSSS--TT-GGGB--TTS-HHHCSHHHHHHHHHHHHC-
T ss_pred CcchhcCCCcHHHHHHHHhHHhccCCCCCccCccccchhccCCccccccCCccccccccccccccCHHHHHHHHHHHHhh
Confidence 468999999999999999999999999999999999999 99765 588999999999999998876432 2333332
Q ss_pred -CCCCCCccCccccccceeeecccccCchHHHHHHhhcc-c-CCCCccchHHHhhcC------CCCccccCcccCCcccc
Q 000355 387 -SSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV-Y-EPNEYPSTMQRLYQW------TPDECIPEFYCDPQIFY 457 (1620)
Q Consensus 387 -~~~~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~-~-~~~~~~~~~~~~~~~------~~~eliPef~~~p~~~~ 457 (1620)
..+.|+||+++|+++++|++||+|++|||.+++.++++ | .+++.+.++.+.+.+ +++|||||||++||||+
T Consensus 81 ~~~~~~~~y~s~ys~~~~v~~~L~R~ePft~l~~~lq~g~fD~~~r~F~SI~~~~~~~~~~~~d~~EliPEff~~Pe~f~ 160 (270)
T PF02138_consen 81 EEFEPPFHYGSHYSSPGTVLYYLVRLEPFTSLHIDLQSGKFDVPDRLFSSIEDTWNSVTENMNDVKELIPEFFYLPEFFK 160 (270)
T ss_dssp -SSS---SBSS-SS-HHHHHHHTTTSTTHHHHHHHCCTTS---CCCSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS
T ss_pred hccCCCccccCCCCCcchhhhhhcccChHHHHHHHHhccccCCchHHHHHHHHHHHHhhcCCccccccChhhhCCHHHhc
Confidence 23478999999999999999999999999999999986 3 588999999988864 56999999999999999
Q ss_pred cCCC-------CCCCcccCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCCc--
Q 000355 458 SQHP-------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP-- 528 (1620)
Q Consensus 458 ~~~~-------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~nv~~~~~~~~~~-- 528 (1620)
|.+. .|+||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++...
T Consensus 161 N~n~~~~g~~~~~~dV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~~~~ 240 (270)
T PF02138_consen 161 NINNFDLGKGEDVDDVELPPWAKSPFEFVYKHRKALESDYVSQNLHHWIDLIFGYKQRGKEAVEAKNVFHPLTYEDSWIE 240 (270)
T ss_dssp -TT-SS--BS-B-SS-B--TT-SSHHHHHHHHHHHHCSHHHHTTHHHHHHHHTSCCCSCHHHHHTT--B-CCCSTTS---
T ss_pred ccccccccCCCccceeecCCccchHHHHHHHHHHHHhhhHHHhhhhHHHHHhhCcccccHHHHHHhhcccccCCCccccC
Confidence 9865 6899999999999999999999999999999999999999999999999999999999999887644
Q ss_pred ------------ccCC--cccccCCCCCCC
Q 000355 529 ------------KSVG--RLQLFTQPHPVR 544 (1620)
Q Consensus 529 ------------~~~g--~~qlf~~pHp~r 544 (1620)
..+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 270 (270)
T PF02138_consen 241 DPMEREAIEAQLKNFGQVPIQLFTKPHPKR 270 (270)
T ss_dssp SHHHHHHHHHHHHHC--------SS-----
T ss_pred CHHHHHHHHHHHHhcCCChHHHhCCCCCCC
Confidence 4578 789999999998
No 4
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=6e-47 Score=505.21 Aligned_cols=293 Identities=19% Similarity=0.237 Sum_probs=225.0
Q ss_pred eecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC----e----EEEEEecCCcceeEEEEeeC-CCeEEEe--
Q 000355 1265 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI----N----CVSGYYGHEEVVNDICVLSS-SGRIASC-- 1333 (1620)
Q Consensus 1265 l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg----~----~l~~l~gH~~~V~sV~f~~~-~~~laS~-- 1333 (1620)
+.+|.+.|.+++|+++|+++||||. |++|+|||..+. . ....+. +...|.+++|++. +..++++
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~----D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~ 553 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGV----NKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNF 553 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeC----CCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeC
Confidence 4569999999999999999999997 899999997542 1 223343 4568999999875 4566444
Q ss_pred CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEec-CCCEEEE
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVV 1412 (1620)
Q Consensus 1334 DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~-dg~~las 1412 (1620)
||+|++||+.+++.+..+.+|. +. |+++++++ ++..+++
T Consensus 554 Dg~v~lWd~~~~~~~~~~~~H~------------------------------~~----------V~~l~~~p~~~~~L~S 593 (793)
T PLN00181 554 EGVVQVWDVARSQLVTEMKEHE------------------------------KR----------VWSIDYSSADPTLLAS 593 (793)
T ss_pred CCeEEEEECCCCeEEEEecCCC------------------------------CC----------EEEEEEcCCCCCEEEE
Confidence 9999999999998887776542 23 45555554 6889999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc-EEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-VIAS 1491 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~-~i~~ 1491 (1620)
|+.||+|++||++++..+..+..+ ..|.+++|.+ ++|.++++|+.||.|++||+++++ .+..
T Consensus 594 gs~Dg~v~iWd~~~~~~~~~~~~~-------~~v~~v~~~~----------~~g~~latgs~dg~I~iwD~~~~~~~~~~ 656 (793)
T PLN00181 594 GSDDGSVKLWSINQGVSIGTIKTK-------ANICCVQFPS----------ESGRSLAFGSADHKVYYYDLRNPKLPLCT 656 (793)
T ss_pred EcCCCEEEEEECCCCcEEEEEecC-------CCeEEEEEeC----------CCCCEEEEEeCCCeEEEEECCCCCccceE
Confidence 999999999999999988887643 2367777642 456899999999999999999876 5778
Q ss_pred EEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCC----CCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEe
Q 000355 1492 WRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW----PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1492 l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~----~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwd 1564 (1620)
+.+|...|+++...++.+|+|||.|++|++||++.+. ...+.++.+|...+. +|++++++|++|+.|+ |.+|+
T Consensus 657 ~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 657 MIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred ecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 8899999999995578899999999999999997531 245678999998876 4999999999999999 99999
Q ss_pred ccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1565 LSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1565 l~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
........ .................+...|++++|+|++..|++|+.||.|+||+
T Consensus 737 ~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 737 KAFPMPVL-SYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred CCCCCceE-EEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 65211000 00000000000000123567899999999999999999999999996
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2e-48 Score=419.63 Aligned_cols=149 Identities=23% Similarity=0.302 Sum_probs=135.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|..+++||+|+||.||+|++ .++|+.||||+++..+..+. +.+.++|||+.|++++||||+.|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d------~~t~~~VAIKKIkl~~~kdG--------i~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARD------TETGKRVAIKKIKLGNAKDG--------INRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEe------cCCCcEEEEEEeeccccccC--------ccHHHHHHHHHHHHccCcchhhhh
Confidence 5799999999999999999997 35789999999988644332 233456999999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
|+|...+.+.||+|||+.||+.+|+. +...++..+++.|+.|+++||+|||+++|+||||||.|+||+++| .+||+|
T Consensus 68 D~F~~~~~l~lVfEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiAD 144 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIAD 144 (318)
T ss_pred hhccCCCceEEEEEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeec
Confidence 99999999999999999999999984 577899999999999999999999999999999999999999999 999999
Q ss_pred cCCccc
Q 000355 264 KPLVGF 269 (1620)
Q Consensus 264 FGla~~ 269 (1620)
||+||.
T Consensus 145 FGLAr~ 150 (318)
T KOG0659|consen 145 FGLARF 150 (318)
T ss_pred ccchhc
Confidence 999993
No 6
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.9e-46 Score=414.87 Aligned_cols=330 Identities=17% Similarity=0.284 Sum_probs=282.7
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
.++..||.+.|.+ |||+|.. |+|||+|.++|+||+. .....+.+||...|.||+|+|||+.||||+. |
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~-----l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~----d 178 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSR-----LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK----D 178 (480)
T ss_pred ccccCCCCCcEEEEEecCCCce-----EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc----C
Confidence 5678899999987 9999997 9999999999999998 6789999999999999999999999999998 8
Q ss_pred cEEEEEeCCCCeEE-EEEecCCcceeEEEEee-----CCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCC
Q 000355 1295 GTVQKWELTRINCV-SGYYGHEEVVNDICVLS-----SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1295 gtVrLWdl~tg~~l-~~l~gH~~~V~sV~f~~-----~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
|+|++||.++|+++ ..++||++.|++++|.| ..+++||+ ||+|+|||+..|+++..+.+|..
T Consensus 179 g~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~---------- 248 (480)
T KOG0271|consen 179 GSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTA---------- 248 (480)
T ss_pred CeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCcc----------
Confidence 99999999999876 57999999999999965 45667655 99999999999999999987642
Q ss_pred CcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCcc
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V 1446 (1620)
. |+|+.+-- ..++++||.|++|++|+...|.+.+.+++|. .+|
T Consensus 249 --------------------~----------VTCvrwGG-~gliySgS~DrtIkvw~a~dG~~~r~lkGHa------hwv 291 (480)
T KOG0271|consen 249 --------------------S----------VTCVRWGG-EGLIYSGSQDRTIKVWRALDGKLCRELKGHA------HWV 291 (480)
T ss_pred --------------------c----------eEEEEEcC-CceEEecCCCceEEEEEccchhHHHhhcccc------hhe
Confidence 2 45555543 3589999999999999999999999999765 457
Q ss_pred ceEeeeCCCccccCcccC-------------------------CCCEEEEEecCCcEEEEECCCC-cEEEEEEccCCcEE
Q 000355 1447 SAICACGSEKMQAGGAVA-------------------------SPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVT 1500 (1620)
Q Consensus 1447 ~sva~~~~~~~~~~g~~p-------------------------~g~~LasGs~Dg~I~lwD~~tg-~~i~~l~gH~~~V~ 1500 (1620)
+.++.+....+....+.+ .|..+++|++|+++.+|+.... +++..+.||..-|+
T Consensus 292 N~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn 371 (480)
T KOG0271|consen 292 NHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVN 371 (480)
T ss_pred eeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhee
Confidence 777776333222222222 3456999999999999998754 58889999999999
Q ss_pred EEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCCCcce
Q 000355 1501 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHR 1576 (1620)
Q Consensus 1501 sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1576 (1620)
.|. +||++++||+|.|++|++||.++| +.+.+|+||-..|. +||.|.++|+|||.|. ++||++..
T Consensus 372 ~V~fSPd~r~IASaSFDkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~t--------- 440 (480)
T KOG0271|consen 372 HVSFSPDGRYIASASFDKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRT--------- 440 (480)
T ss_pred eEEECCCccEEEEeecccceeeeeCCCc--chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeee---------
Confidence 999 999999999999999999999999 78889999999999 5999999999999999 99999862
Q ss_pred eeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1577 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1577 ~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.++..-. .+|...|.++.|+|||..+++|+.|..+++|
T Consensus 441 ---kKl~~DL--pGh~DEVf~vDwspDG~rV~sggkdkv~~lw 478 (480)
T KOG0271|consen 441 ---KKLKQDL--PGHADEVFAVDWSPDGQRVASGGKDKVLRLW 478 (480)
T ss_pred ---eeecccC--CCCCceEEEEEecCCCceeecCCCceEEEee
Confidence 1222111 1588999999999999999999999999999
No 7
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-45 Score=405.56 Aligned_cols=157 Identities=23% Similarity=0.198 Sum_probs=138.9
Q ss_pred ccccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCc
Q 000355 97 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 176 (1620)
Q Consensus 97 ~~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~H 176 (1620)
+...+.++.|+.+++|++|+||+||+|++. .++++||+|+++..+... .+.+.++|||.+|.+++|
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk------~t~eIVALKr~kmekek~--------GFPItsLREIniLl~~~H 134 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDK------KTDEIVALKRLKMEKEKE--------GFPITSLREINILLKARH 134 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccC------CcceeEEeeecccccccC--------CCcchhHHHHHHHHhcCC
Confidence 345567889999999999999999999973 467999999998865321 245567899999999999
Q ss_pred ccccceeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 177 PNVAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 177 pNIv~l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
||||.+.++.... +.+|||||||+.||..++... ...+...+++.++.|+++||+|||.++|+||||||+|+|++..
T Consensus 135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 9999999998755 489999999999999999853 4678999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccC
Q 000355 255 CWSWLYICDKPLVGFN 270 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~ 270 (1620)
| .+||+|||+||..
T Consensus 214 G--~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 214 G--ILKIADFGLAREY 227 (419)
T ss_pred C--cEEecccchhhhh
Confidence 9 8999999999943
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-45 Score=421.90 Aligned_cols=179 Identities=23% Similarity=0.258 Sum_probs=148.9
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
..+..+.|+.+++||+|+||.||+|++ ..+|++||+|++........ ... .++|||.||++|+|||
T Consensus 112 ~~r~~~~feki~kIGeGTyg~VYkAr~------~~tgkivALKKvr~d~~~~~-~~~-------t~~REI~ILr~l~HpN 177 (560)
T KOG0600|consen 112 GPRRADSFEKIEKIGEGTYGQVYKARD------LETGKIVALKKVRFDNEKEG-FPI-------TAIREIKILRRLDHPN 177 (560)
T ss_pred cccchHHHHHHHHhcCcchhheeEeee------cccCcEEEEEEeecccCCCc-chH-------HHHHHHHHHHhcCCCc
Confidence 345567899999999999999999997 46899999999987643332 222 2359999999999999
Q ss_pred ccceeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 179 VAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 179 Iv~l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
||+|.+..... ..+|||+|||+.||.-++. ++...|++.+++.||+||+.||+|||++||+|||||.+|||||.+|
T Consensus 178 IikL~eivt~~~~~siYlVFeYMdhDL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G- 255 (560)
T KOG0600|consen 178 IIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG- 255 (560)
T ss_pred ccceeeEEEecCCceEEEEEecccchhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC-
Confidence 99999998877 6899999999999999997 4677899999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
.+||+|||||+........ . .+.++-|.+|+|||++.
T Consensus 256 -~LKiaDFGLAr~y~~~~~~--~--------~T~rVvTLWYRpPELLL 292 (560)
T KOG0600|consen 256 -VLKIADFGLARFYTPSGSA--P--------YTSRVVTLWYRPPELLL 292 (560)
T ss_pred -CEEeccccceeeccCCCCc--c--------cccceEEeeccChHHhc
Confidence 8999999999954322111 0 23344677777777653
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.9e-45 Score=400.19 Aligned_cols=151 Identities=21% Similarity=0.292 Sum_probs=133.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
|++|+.+.++|+|+||+||||++ ..+|++||||++....... ..++. ++|||++|+.|+|||+|.|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrn------k~TgqIVAIKkF~Esedd~-~VkKI-------AlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRN------KDTGQIVAIKKFVESEDDP-VVKKI-------ALREIRMLKQLKHENLVNL 66 (396)
T ss_pred CcHHhhhhccccCcceEEEEecc------CCcccEEEEEeeccCCccH-HHHHH-------HHHHHHHHHhcccchHHHH
Confidence 57899999999999999999996 2679999999997643332 22222 3599999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++|.....++||+|||+.++.+-+...+++ +++..++.|++|++.|+.|||+++|||||||||||||+.+| .+|||
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLC 143 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLC 143 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEec
Confidence 9999999999999999999888888765554 58889999999999999999999999999999999999999 99999
Q ss_pred ecCCcccC
Q 000355 263 DKPLVGFN 270 (1620)
Q Consensus 263 DFGla~~~ 270 (1620)
|||+||..
T Consensus 144 DFGFAR~L 151 (396)
T KOG0593|consen 144 DFGFARTL 151 (396)
T ss_pred cchhhHhh
Confidence 99999943
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-45 Score=418.61 Aligned_cols=175 Identities=21% Similarity=0.228 Sum_probs=149.4
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HP 177 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-Hp 177 (1620)
+...+++|.++++||.|+||.||+|+. .+++..||||++++.-... .++++ +||++.|++|+ ||
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~------~~~~~~VAIK~MK~Kf~s~---ee~~n------LREvksL~kln~hp 69 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKS------KETGELVAIKKMKKKFYSW---EECMN------LREVKSLRKLNPHP 69 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeee------cCCCceeeHHHHHhhhccH---HHHHH------HHHHHHHHhcCCCC
Confidence 345688999999999999999999996 3678889999998754443 33332 49999999999 99
Q ss_pred cccceeeEEEeCC-EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 178 NVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 178 NIv~l~~~~~~~~-~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
|||+|.+++.+.+ .+|+|||||+.+|+++++.. ++.+++..++.|++||++||+|+|.+|+.|||+||||||+....
T Consensus 70 niikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~- 147 (538)
T KOG0661|consen 70 NIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGND- 147 (538)
T ss_pred cchhhHHHhhccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccc-
Confidence 9999999999988 99999999999999999964 88899999999999999999999999999999999999999776
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.+||+|||+||.... .+. -+.+++|.+|+|||++
T Consensus 148 -~iKiaDFGLARev~S--------kpP----YTeYVSTRWYRAPEvL 181 (538)
T KOG0661|consen 148 -VIKIADFGLAREVRS--------KPP----YTEYVSTRWYRAPEVL 181 (538)
T ss_pred -eeEeccccccccccc--------CCC----cchhhhcccccchHHh
Confidence 799999999994321 111 1335578888888876
No 11
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-44 Score=401.75 Aligned_cols=175 Identities=21% Similarity=0.325 Sum_probs=143.0
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
....|..++.||+|+||.|..|.+. .+|+.||||++...-......++ ++||+++|+.++|+||+.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~------~t~~~VAIKKi~~~F~~~~~akR--------tlRElklLr~~~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDK------RTGEKVAIKKILNPFENQIDAKR--------TLRELKLLRHLRHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEc------CCCCEeehhhhhhhhhchHHHHH--------HHHHHHHHHHhcCCCcce
Confidence 3457777899999999999999872 56799999999743233333333 349999999999999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++..+ +.+|+|+|+|+.||.++|+ .+..+++.+++++++||++||+|+|+.+|+||||||.|||++.++
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c- 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC- 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-
Confidence 99999762 3799999999999999999 455699999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.+||||||+||..... ......+.+..|.+|+|||++
T Consensus 163 -~lKI~DFGLAR~~~~~---------~~~~~mTeYVaTRWYRAPEll 199 (359)
T KOG0660|consen 163 -DLKICDFGLARYLDKF---------FEDGFMTEYVATRWYRAPELL 199 (359)
T ss_pred -CEEeccccceeecccc---------CcccchhcceeeeeecCHHHH
Confidence 8999999999954211 111234555667777777764
No 12
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-43 Score=400.21 Aligned_cols=179 Identities=20% Similarity=0.234 Sum_probs=147.4
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH--HHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~--~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
..+.|.+.+.||+|+||.|-+|.. ..+|+.||||++.+.+...... .... ...+|++||++|+||||
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e------~~tgk~vAiKIi~krk~~~~s~~~~~~~-----~v~~EieILkkL~HP~I 238 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYE------KKTGKQVAIKIINKRKSTGCSRAIAKTR-----DVQNEIEILKKLSHPNI 238 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEE------cccCcEEEeeeeehhhcccccccccchh-----hhHHHHHHHHhcCCCCE
Confidence 456899999999999999999986 2578999999999876654221 1111 12299999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC-ce
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC-WS 257 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~-~~ 257 (1620)
|+++++|+..+..||||||++| +|.+.+- .++.+.+..-+.+++|++.|+.|||++||+||||||+|||++.+. ..
T Consensus 239 V~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 239 VRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred EEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcce
Confidence 9999999999999999999994 9999998 567888999999999999999999999999999999999998762 23
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
.+||+|||+|+.... +.++....|||.|.|||++.+
T Consensus 317 llKItDFGlAK~~g~------------~sfm~TlCGTpsYvAPEVl~~ 352 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGE------------GSFMKTLCGTPSYVAPEVLAS 352 (475)
T ss_pred EEEecccchhhcccc------------ceehhhhcCCccccChhheec
Confidence 899999999995321 112222235999999999743
No 13
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-41 Score=403.40 Aligned_cols=173 Identities=18% Similarity=0.236 Sum_probs=151.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|+..+.||+|+|+.||++++ ..+|+.||+|++.+........++-+. +||+|.+.|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~------~~tge~~A~KvVpk~~l~k~~~reKv~-------~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARD------LDTGEVVAVKVVPKKLLKKPKQREKVL-------NEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEE------cCCCcEEEEEEeehHHhcCcchHHHHH-------HHHHHHHhcCCCcEEeee
Confidence 6799999999999999999996 367899999999886555555555553 999999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|++.+++|||+|+|. ++|..+++ +.+.++|.++++|++||+.||.|||+++|||||||..||||+++. ++||+
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~--~VKIg 160 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM--NVKIG 160 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC--cEEec
Confidence 99999999999999999 69999998 678899999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|||||.......++ ..+.| |||.|.|||++.
T Consensus 161 DFGLAt~le~~~Er----------k~TlC-GTPNYIAPEVl~ 191 (592)
T KOG0575|consen 161 DFGLATQLEYDGER----------KKTLC-GTPNYIAPEVLN 191 (592)
T ss_pred ccceeeeecCcccc----------cceec-CCCcccChhHhc
Confidence 99999966533221 12334 599999999973
No 14
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.8e-40 Score=367.31 Aligned_cols=290 Identities=23% Similarity=0.310 Sum_probs=253.2
Q ss_pred CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1259 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1259 g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
..|-.++.||.++|.|++|+|+|+.|+|||. |.|+|+||+.|..+..+.+||...|.||+|+|++..|||+ ||+
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsG----D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~ 180 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSG----DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS 180 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCC----CceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCe
Confidence 4577889999999999999999999999998 9999999999999999999999999999999999999766 999
Q ss_pred EEEEeCCCCceEE-EEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC
Q 000355 1337 LHVWNSQTGKLLS-VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1415 (1620)
Q Consensus 1337 V~IWD~~tg~~i~-~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~ 1415 (1620)
|++||.++|+++. .+. .|..+|.+++|.|- ...|..+.+++++.
T Consensus 181 I~lwdpktg~~~g~~l~------------------------------gH~K~It~Lawep~-----hl~p~~r~las~sk 225 (480)
T KOG0271|consen 181 IRLWDPKTGQQIGRALR------------------------------GHKKWITALAWEPL-----HLVPPCRRLASSSK 225 (480)
T ss_pred EEEecCCCCCccccccc------------------------------CcccceeEEeeccc-----ccCCCccceecccC
Confidence 9999999998752 333 45677888888863 45567789999999
Q ss_pred CCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc
Q 000355 1416 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1495 (1620)
Q Consensus 1416 DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH 1495 (1620)
||+|+|||+..+.++..+.+|.. .|+||++.+. .+|++||.|++|++|+...|.++..++||
T Consensus 226 Dg~vrIWd~~~~~~~~~lsgHT~------~VTCvrwGG~------------gliySgS~DrtIkvw~a~dG~~~r~lkGH 287 (480)
T KOG0271|consen 226 DGSVRIWDTKLGTCVRTLSGHTA------SVTCVRWGGE------------GLIYSGSQDRTIKVWRALDGKLCRELKGH 287 (480)
T ss_pred CCCEEEEEccCceEEEEeccCcc------ceEEEEEcCC------------ceEEecCCCceEEEEEccchhHHHhhccc
Confidence 99999999999999999997654 4899998642 48999999999999999999999999999
Q ss_pred CCcEEEEE-eC------------------------------------CCCEEEEEeCCCcEEEEECCCCCCCCCeEeecC
Q 000355 1496 DGYVTKLA-AP------------------------------------EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH 1538 (1620)
Q Consensus 1496 ~~~V~sva-sp------------------------------------dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH 1538 (1620)
..+|+.++ +. ++..|+|||+|.++.+|+....+ +++..+.||
T Consensus 288 ahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kpi~rmtgH 366 (480)
T KOG0271|consen 288 AHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KPITRMTGH 366 (480)
T ss_pred chheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc-cchhhhhch
Confidence 99999998 61 12359999999999999987653 566789999
Q ss_pred CCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCc
Q 000355 1539 TNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGY 1615 (1620)
Q Consensus 1539 ~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~ 1615 (1620)
..-|+. ||||++++||+|.|+ |++|+.. +|+.. ...+ +|...|+.++|+.|.|+|++||.|.+
T Consensus 367 q~lVn~V~fSPd~r~IASaSFDkSVkLW~g~-----tGk~l-------asfR--GHv~~VYqvawsaDsRLlVS~SkDsT 432 (480)
T KOG0271|consen 367 QALVNHVSFSPDGRYIASASFDKSVKLWDGR-----TGKFL-------ASFR--GHVAAVYQVAWSADSRLLVSGSKDST 432 (480)
T ss_pred hhheeeEEECCCccEEEEeecccceeeeeCC-----Ccchh-------hhhh--hccceeEEEEeccCccEEEEcCCCce
Confidence 999994 999999999999999 9999965 44431 1112 59999999999999999999999999
Q ss_pred EEEcC
Q 000355 1616 LRLCC 1620 (1620)
Q Consensus 1616 IrlWd 1620 (1620)
+++|+
T Consensus 433 LKvw~ 437 (480)
T KOG0271|consen 433 LKVWD 437 (480)
T ss_pred EEEEE
Confidence 99996
No 15
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-40 Score=377.32 Aligned_cols=174 Identities=21% Similarity=0.210 Sum_probs=143.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc-ccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN-Iv~ 181 (1620)
+..|+.+++||+|+||+||+|++. .+|+.||+|++...... ++ ....++||+.+|+.|+|+| ||.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~------~~g~~VALKkirl~~~~-EG-------~P~taiREisllk~L~~~~~iv~ 75 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSK------RTGKFVALKKIRLEFEE-EG-------VPSTAIREISLLKRLSHANHIVR 75 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEe------cCCCEEEEEEEeccccc-cC-------CCchhhHHHHHHHHhCCCcceEE
Confidence 667899999999999999999972 46799999999875432 11 1223579999999999999 999
Q ss_pred eeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 182 VLGLLKTSG------LITSVIPKTPYTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
|++++.+.+ .+++||||++.||..++...+. ..++...++.+++||++||+|||+++|+||||||+||||++
T Consensus 76 L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 76 LHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 999999888 8999999999999999996543 35777899999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+| .+||+|||+|+......+ +-+...+|.+|+|||++
T Consensus 156 ~G--~lKlaDFGlAra~~ip~~-----------~yt~evvTlWYRaPEvL 192 (323)
T KOG0594|consen 156 SG--VLKLADFGLARAFSIPMR-----------TYTPEVVTLWYRAPEVL 192 (323)
T ss_pred CC--cEeeeccchHHHhcCCcc-----------cccccEEEeeccCHHHh
Confidence 99 899999999994321111 02233466777777764
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=380.81 Aligned_cols=154 Identities=20% Similarity=0.226 Sum_probs=140.2
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 178 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpN 178 (1620)
.+...+|..++.||+|+|++|++|++. .+++.+|||++.+.....+.....+. +|-.+|..| .||.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~------~t~keYAiKVl~K~~Iike~KvkYV~-------~Ek~~l~~L~~hPg 135 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREK------ATGKEYAIKVLDKRYIIKEKKVKYVT-------REKEALTQLSGHPG 135 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeec------CCCceeeHhhhhHHHHHhhcccchhh-------HHHHHHHHhhCCCC
Confidence 344679999999999999999999972 46899999999887666666556664 899999999 8999
Q ss_pred ccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|++||..|+++..+|+|+||++ |+|.++|+ +.+.+.+..+|+|+.||+.||+|||++|||||||||||||||.++
T Consensus 136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-- 211 (604)
T KOG0592|consen 136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-- 211 (604)
T ss_pred eEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--
Confidence 9999999999999999999999 69999999 578899999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccC
Q 000355 258 WLYICDKPLVGFN 270 (1620)
Q Consensus 258 ~lKL~DFGla~~~ 270 (1620)
++||+|||.|+..
T Consensus 212 hikITDFGsAK~l 224 (604)
T KOG0592|consen 212 HIKITDFGSAKIL 224 (604)
T ss_pred cEEEeeccccccC
Confidence 9999999999954
No 17
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=375.60 Aligned_cols=146 Identities=25% Similarity=0.366 Sum_probs=127.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
-.|.-.+.+|.|+||.||+|.. .++++.+|||++-.++.... +|+++|++++|||||+|.
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~------~e~~~~vAIKKv~~d~r~kn--------------rEl~im~~l~HpNIV~L~ 83 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKL------RETEEEVAIKKVLQDKRYKN--------------RELQIMRKLDHPNIVRLL 83 (364)
T ss_pred EEEEeeEEEeecccceEEEEEE------cCCCceeEEEEecCCCCcCc--------------HHHHHHHhcCCcCeeeEE
Confidence 3788899999999999999985 24579999999987655432 899999999999999999
Q ss_pred eEEEeCC-----EEEEEEeCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 184 GLLKTSG-----LITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 184 ~~~~~~~-----~~~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
.+|.... .+.+|||||+.+|.++++. ..+..++.-+++.|++||++||.|||+.||+||||||+|||+|.+.
T Consensus 84 ~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t- 162 (364)
T KOG0658|consen 84 YFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT- 162 (364)
T ss_pred EEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-
Confidence 9887542 5679999999999999984 2356788999999999999999999999999999999999999884
Q ss_pred eEEEEeecCCcccC
Q 000355 257 SWLYICDKPLVGFN 270 (1620)
Q Consensus 257 ~~lKL~DFGla~~~ 270 (1620)
+.+||||||.|+..
T Consensus 163 g~LKicDFGSAK~L 176 (364)
T KOG0658|consen 163 GVLKICDFGSAKVL 176 (364)
T ss_pred CeEEeccCCcceee
Confidence 28999999999943
No 18
>KOG1787 consensus Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-41 Score=431.37 Aligned_cols=240 Identities=34% Similarity=0.504 Sum_probs=204.6
Q ss_pred cccccccccccchHHHHhhhhcccCCCCCCCcCCcccceee-ccCCCC-CCCCCCCCCCCCccHHhhhccccc-cccccc
Q 000355 310 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKSKWRLAKGDEQ-LDFTYS 386 (1620)
Q Consensus 310 ~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~-d~~~~~-~~~~~~~~rdlsk~~~~~~~~~~~-~~~~~~ 386 (1620)
..+..|+.|+|+||+|+|.+|..+||+++|++||||||||+ ||.+.. |.+.+.+||||+||+|++|..... +..+|.
T Consensus 470 ~~t~~w~~~~~s~~~~l~~l~t~agrsyndl~qypvfpwvl~dy~s~~ld~s~~~~frdlsKpigaln~~~~~~f~dry~ 549 (1126)
T KOG1787|consen 470 GITQEWQAREISNFEVLMQLNTSAGRSYNDLTQYPVFPWVLRDYSSETLDLSKLSTFRDLSKPIGALNPKRAYLFRDRYE 549 (1126)
T ss_pred CccHHHHhhccccHHHHHHHHhccCcccCccccCCCCCeeeecccchhhhcccchhHHhhcCcccCCCcccchhHhhhhh
Confidence 46778999999999999999999999999999999999999 887654 889999999999999999876544 455676
Q ss_pred CCC----CCCccCccccccceeeecccccCchHHHHHHhhcc--cCCCCccchHHHhhc------CCCCccccCcccCCc
Q 000355 387 SSE----IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQ------WTPDECIPEFYCDPQ 454 (1620)
Q Consensus 387 ~~~----~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~------~~~~eliPef~~~p~ 454 (1620)
+.+ ..+||++||++...+++|++|.+||+.++++++.+ +.+.+-+++..+-|. .|++|+||||||.||
T Consensus 550 s~~D~~i~~~~~~thys~~~~~l~~l~rvepf~S~~~~l~~gkfd~~dr~~~sv~~~~r~~l~d~sdvkelipeffy~p~ 629 (1126)
T KOG1787|consen 550 SFEDQAIPSFHYGTHYSSAANVLAYLLRVEPFTSLHLQLQDGKFDHADRAFSSVASSWRRCLRDTSDVKELIPEFFYFPE 629 (1126)
T ss_pred ccccccccccccccccccccceeeeeeecCccccccccccccccccchhhHHHHHHHHhhhccchhhHHHhhhHHHHHHH
Confidence 654 34799999999999999999999999999988754 445444444443332 368999999999999
Q ss_pred ccccCC----------CCCCCcccCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCC
Q 000355 455 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 524 (1620)
Q Consensus 455 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~nv~~~~~~ 524 (1620)
+|.|.+ ++|.||.|||||++|++|+..||+||||+|||.++|+||||||||||+|++|+.|.|||+..+|
T Consensus 630 ll~~~~~~~lg~~~dg~~vi~v~lppwa~~pe~f~~~nr~aLes~fvs~~l~~widlifg~Kq~g~ea~~a~nvf~~~ty 709 (1126)
T KOG1787|consen 630 LLVNSNLYNLGVRVDGEPVIDVVLPPWAKSPEDFETRNREALESEFVSCQLHQWIDLIFGYKQRGPEAVRAMNVFYYLTY 709 (1126)
T ss_pred HHhccccccceeecCCccceeeecccccCCHHHHHHHHHHHhhccccccccchhHHhhhhHhhcCHHHHHhhhhhccCCc
Confidence 998753 4689999999999999999999999999999999999999999999999999999999998764
Q ss_pred CC-----------C--------cccCC--cccccCCCCCCCCCCcc
Q 000355 525 PT-----------K--------PKSVG--RLQLFTQPHPVRQTATW 549 (1620)
Q Consensus 525 ~~-----------~--------~~~~g--~~qlf~~pHp~r~~~~~ 549 (1620)
.. . +.++| |.|+|.++||+|.....
T Consensus 710 eG~v~~~~~~d~~~~~eai~~~i~~f~~~~~~~~~e~~~~~~~~~~ 755 (1126)
T KOG1787|consen 710 EGAVDLDSITDQVLRTEAIEAQIASFGQTPSQLLQEQHPPRASESK 755 (1126)
T ss_pred cccccccccCChhHHHHHHHHHHhhccccchhhhhhccCCcchhcc
Confidence 21 0 12456 79999999999976655
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.7e-39 Score=374.17 Aligned_cols=173 Identities=26% Similarity=0.319 Sum_probs=153.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|.+.+.||+|+||.||||+++ .+.+.||+|.+.+.+...++.+... +|++|++.|+|||||.+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK------~t~~~vAik~i~K~gr~~k~l~~l~--------~ev~i~r~lkHpniv~m 66 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRK------YTIQVVAIKFIDKSGRNEKELKNLR--------QEVRILRSLKHPNIVEM 66 (808)
T ss_pred CcchhHHHHhcCCccceeeecccc------cceeEEEEEEehhcCCchHHHHHHH--------HHHHHHHhcCCcchhhH
Confidence 468999999999999999999963 4679999999999888777777766 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++|++..++++|.|||.|+|..++. ..+.++|+.++.+++|++.||.|||+++|+|||+||.|||++.++ .+|+|
T Consensus 67 ~esfEt~~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~--~~Klc 142 (808)
T KOG0597|consen 67 LESFETSAHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG--TLKLC 142 (808)
T ss_pred HHhhcccceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC--ceeec
Confidence 99999999999999999999999999 578899999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|||+||...... ...+...|||.|||||++.
T Consensus 143 dFg~Ar~m~~~t-----------~vltsikGtPlYmAPElv~ 173 (808)
T KOG0597|consen 143 DFGLARAMSTNT-----------SVLTSIKGTPLYMAPELVE 173 (808)
T ss_pred hhhhhhhcccCc-----------eeeeeccCcccccCHHHHc
Confidence 999999543210 1123445899999999864
No 20
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=366.66 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=180.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|.+.+.||+|+||+||+|+++ .++..||||.+.+.+...+..+... .|+.+|++++|||||.
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~------~~~~~VAIK~i~~~~l~~k~~e~L~--------~Ei~iLkel~H~nIV~ 73 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHK------KSGTEVAIKCIAKKKLNKKLVELLL--------SEIKILKELKHPNIVR 73 (429)
T ss_pred ccccceehhhccCcceEEEEEeEec------cCCceEEeeeehhhccCHHHHHHHH--------HHHHHHHhcCCcceee
Confidence 4779999999999999999999973 4569999999988665444333333 9999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC-Cc---
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW--- 256 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-~~--- 256 (1620)
|++++++++++|||||||. |||.++|+ ..+.++|..++.++.||+.||++||+++||||||||+||||+.. +.
T Consensus 74 l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~ 151 (429)
T KOG0595|consen 74 LLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTS 151 (429)
T ss_pred EEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCC
Confidence 9999999999999999999 69999999 56689999999999999999999999999999999999999875 22
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
..+||+|||+||...... ...+-| |+|.|||||++....|+.+.|+|+.|.|. |+++.+..+|...+
T Consensus 152 ~~LKIADFGfAR~L~~~~-----------~a~tlc-GSplYMAPEV~~~~~YdAKADLWSiG~Il-yq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 152 PVLKIADFGFARFLQPGS-----------MAETLC-GSPLYMAPEVIMSQQYDAKADLWSIGTIL-YQCLTGKPPFDAET 218 (429)
T ss_pred ceEEecccchhhhCCchh-----------HHHHhh-CCccccCHHHHHhccccchhhHHHHHHHH-HHHHhCCCCccccC
Confidence 379999999999654211 112223 68999999999999999999999999998 99999999988777
Q ss_pred CCCC
Q 000355 337 WGDY 340 (1620)
Q Consensus 337 ~~dl 340 (1620)
..++
T Consensus 219 ~~eL 222 (429)
T KOG0595|consen 219 PKEL 222 (429)
T ss_pred HHHH
Confidence 6655
No 21
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-38 Score=359.50 Aligned_cols=184 Identities=17% Similarity=0.242 Sum_probs=152.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++.+.++.||+|+.|+||||+++ .+++++|+|.+..+ ......++.+ +|++++++++|||||++
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk------~t~~i~AlK~I~~~-~~~~~~~Qi~--------rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHK------PTGKIYALKVILLN-IDPALQKQIL--------RELEILRSCQSPYIVGF 142 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEc------CCCeEEEEEeeccc-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 457888999999999999999972 57899999999543 3334444555 99999999999999999
Q ss_pred eeEEEeCC-EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
|++|..+. .++|+||||+ |+|.++++ ..+.++|.....+++++++||.|||+ ++||||||||+||||+..| .+
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CE
Confidence 99999999 5999999999 59999998 45789999999999999999999996 9999999999999999999 99
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
||||||.++..... ......||..|||||.+.+..|+...|+|+.|
T Consensus 219 KicDFGVS~~lvnS-------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLG 264 (364)
T KOG0581|consen 219 KICDFGVSGILVNS-------------IANTFVGTSAYMSPERISGESYSVKSDIWSLG 264 (364)
T ss_pred EeccccccHHhhhh-------------hcccccccccccChhhhcCCcCCcccceeccc
Confidence 99999999954311 12234588999999988765444444444444
No 22
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=325.87 Aligned_cols=146 Identities=23% Similarity=0.256 Sum_probs=132.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCC--cHhHHHhhccCCcccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVP--SFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~--~~~Ei~iL~~l~HpNIv~ 181 (1620)
.+|...++||+|+||+||+|++ .+++++||+|.++.+.... |+| ++|||.+|++++|.|||+
T Consensus 2 ~~ydkmekigegtygtvfkarn------~~t~eivalkrvrldddde----------gvpssalreicllkelkhknivr 65 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARN------RETHEIVALKRVRLDDDDE----------GVPSSALREICLLKELKHKNIVR 65 (292)
T ss_pred cchHHHHhhcCCcceeeEeccc------CCccceEEEEEEeccCCCC----------CCcHHHHHHHHHHHHhhhcceee
Confidence 4688889999999999999985 2678999999998754332 233 469999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..+.+|+|||..+|..+... -++.+....++.++.|+++||.|||+++++||||||.|+||+.+| .+|+
T Consensus 66 l~dvlhsdkkltlvfe~cdqdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elkl 142 (292)
T KOG0662|consen 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKL 142 (292)
T ss_pred hhhhhccCceeEEeHHHhhHHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEe
Confidence 9999999999999999999999999984 467789999999999999999999999999999999999999999 9999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+||
T Consensus 143 adfglar 149 (292)
T KOG0662|consen 143 ADFGLAR 149 (292)
T ss_pred cccchhh
Confidence 9999999
No 23
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.6e-37 Score=347.85 Aligned_cols=277 Identities=21% Similarity=0.264 Sum_probs=244.6
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeC--CCeEEEe--CCcEEEEeC
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSS--SGRIASC--DGTLHVWNS 1342 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~--~~~laS~--DgtV~IWD~ 1342 (1620)
|-+.+|..+.||.|+..|+||| |+|+++||+..+...+++|.||++.|.++.|+|. +..++|+ ||+|++|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~s----wsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGS----WSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKL 248 (459)
T ss_pred cCCCcceeeEeecCCCeEEEee----cCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeecc
Confidence 5678999999999999999999 5999999999999999999999999999999997 3356655 999999999
Q ss_pred CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEE
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1422 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlw 1422 (1620)
.+...+..+.+|. ..|..++|+|+|++++++|.|.+-|+|
T Consensus 249 ~~e~~l~~l~gH~----------------------------------------~RVs~VafHPsG~~L~TasfD~tWRlW 288 (459)
T KOG0272|consen 249 SQETPLQDLEGHL----------------------------------------ARVSRVAFHPSGKFLGTASFDSTWRLW 288 (459)
T ss_pred CCCcchhhhhcch----------------------------------------hhheeeeecCCCceeeecccccchhhc
Confidence 9888888888763 225667777889999999999999999
Q ss_pred ECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEE
Q 000355 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1423 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sv 1502 (1620)
|++++..+....||. ..|.+++|. +||.++++|+-|..-+|||+|+|.++..+.||..+|.+|
T Consensus 289 D~~tk~ElL~QEGHs------~~v~~iaf~-----------~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V 351 (459)
T KOG0272|consen 289 DLETKSELLLQEGHS------KGVFSIAFQ-----------PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSV 351 (459)
T ss_pred ccccchhhHhhcccc------cccceeEec-----------CCCceeeccCccchhheeecccCcEEEEecccccceeeE
Confidence 999999887777654 447888875 677899999999999999999999999999999999999
Q ss_pred E-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEee-cCCEEEEEeCCc-eEEEeccCCCCCCCccee
Q 000355 1503 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSV-WGQDVISISNNK-IGLSSLSKSADEDGQHRL 1577 (1620)
Q Consensus 1503 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSp-dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1577 (1620)
+ +|+|..|||||.|++++|||++.. ..++++.+|++-|+ +|+| .|.+|+|+|.|. +++|.-. +.++
T Consensus 352 ~fsPNGy~lATgs~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~-----~~~~-- 422 (459)
T KOG0272|consen 352 AFSPNGYHLATGSSDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR-----TWSP-- 422 (459)
T ss_pred eECCCceEEeecCCCCcEEEeeeccc--ccceecccccchhhheEecccCCeEEEEcccCcceeeecCC-----Cccc--
Confidence 9 999999999999999999999987 56899999999998 5998 689999999999 9999954 2222
Q ss_pred eccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1578 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1578 ~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+... .||.+.|-+++++||+..++|+|.|.++|+|.
T Consensus 423 ----~ksL---aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 423 ----LKSL---AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ----chhh---cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 1111 26999999999999999999999999999994
No 24
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.3e-38 Score=346.46 Aligned_cols=158 Identities=19% Similarity=0.220 Sum_probs=132.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
....|+.++.||+|+||.||+|....... ...+.+|||+++..+... .+.+.++||+.++++++|||||.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~--kr~k~yAiKkfk~~kd~t--------GiS~SAcREiaL~REl~h~nvi~ 91 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTND--KRTKEYAIKKFKGEKDGT--------GISMSACREIALLRELKHPNVIS 91 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCc--ccchhhHHHHHhccCCCC--------CcCHHHHHHHHHHHHhcCCcchh
Confidence 35689999999999999999997543321 224589999998754422 12234679999999999999999
Q ss_pred eeeEEEe-CCEEEEEEeCCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-
Q 000355 182 VLGLLKT-SGLITSVIPKTPYTLENILQFS---PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW- 256 (1620)
Q Consensus 182 l~~~~~~-~~~~~lV~E~~~g~L~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~- 256 (1620)
|..+|.+ +..+++++||.+.||..+|++. ..+.++...++.|+.||+.|+.|||++.|+||||||.|||+..+|.
T Consensus 92 Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 92 LVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCc
Confidence 9999987 7799999999999999999863 3456899999999999999999999999999999999999998832
Q ss_pred -eEEEEeecCCccc
Q 000355 257 -SWLYICDKPLVGF 269 (1620)
Q Consensus 257 -~~lKL~DFGla~~ 269 (1620)
+.+||+|||+||.
T Consensus 172 rG~VKIaDlGlaR~ 185 (438)
T KOG0666|consen 172 RGRVKIADLGLARL 185 (438)
T ss_pred cCeeEeecccHHHH
Confidence 2899999999994
No 25
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=357.40 Aligned_cols=206 Identities=18% Similarity=0.210 Sum_probs=182.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+++.. .+++++|+|++++.+.......+.+. +|..||..++||+||++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~------dt~kiYAmKvl~K~~iv~~~e~~~~~-------~Er~IL~~v~hPFiv~l 90 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK------DTGKIYAMKVLKKKKIVEKKEVRHTK-------AERNILSKIKHPFIVKL 90 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc------ccCceeehhhhhhhHhhhhhhHHHHH-------HHHHHHHhCCCCcEeee
Confidence 679999999999999999999852 67899999999998777664444443 99999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+..|++.+++|||+||+.| +|..+|. +++.++|..+++|+.+|+.||.|||++|||||||||||||||.+| +++|
T Consensus 91 ~ysFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~L 166 (357)
T KOG0598|consen 91 IYSFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKL 166 (357)
T ss_pred EEecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEE
Confidence 9999999999999999995 9999998 688999999999999999999999999999999999999999999 9999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+||||++........ + .+.| ||+.|||||++.+.+|+.++|+|+.|.+. ||+|++..+|.++..
T Consensus 167 tDFgL~k~~~~~~~~-----t-----~tfc-GT~eYmAPEil~~~gy~~~vDWWsLGill-YeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 167 TDFGLCKEDLKDGDA-----T-----RTFC-GTPEYMAPEILLGKGYDKAVDWWSLGILL-YEMLTGKPPFYAEDV 230 (357)
T ss_pred eccccchhcccCCCc-----c-----cccc-CCccccChHHHhcCCCCcccchHhHHHHH-HHHhhCCCCCcCccH
Confidence 999999954322211 1 1223 69999999999999999999999999777 999999999988764
No 26
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3.9e-37 Score=347.56 Aligned_cols=274 Identities=20% Similarity=0.286 Sum_probs=244.6
Q ss_pred cCCCcee--ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccC--CCEEEEeccCCCCCcEE
Q 000355 1223 KCEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD--ECTVFTAGIGPGFKGTV 1297 (1620)
Q Consensus 1223 gH~~~V~--~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspd--g~~LaSgs~d~~~DgtV 1297 (1620)
|-+..|. .||.|+.. |+|||.+|.+++|+.. ...+++|+||++.|.++.|+|. +..+|||+. ||+|
T Consensus 173 gd~rPis~~~fS~ds~~-----laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~----Dgtv 243 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKH-----LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASA----DGTV 243 (459)
T ss_pred cCCCcceeeEeecCCCe-----EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeecc----CCce
Confidence 4444554 38999986 9999999999999988 7899999999999999999997 568999997 9999
Q ss_pred EEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEE--eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccc
Q 000355 1298 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1375 (1620)
Q Consensus 1298 rLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS--~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1375 (1620)
++|++.+...++.+.||...|..|+|+|+|.+|++ .|.+-++||+.+++.+....+|
T Consensus 244 klw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGH--------------------- 302 (459)
T KOG0272|consen 244 KLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGH--------------------- 302 (459)
T ss_pred eeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccc---------------------
Confidence 99999999999999999999999999999999954 4999999999998876544444
Q ss_pred cccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCC
Q 000355 1376 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1376 ~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~ 1455 (1620)
+.+|.++ +|.+||..+++|+.|..-||||+++|+++..+.+|.. .|.+|+|+
T Consensus 303 ---------s~~v~~i----------af~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k------~I~~V~fs--- 354 (459)
T KOG0272|consen 303 ---------SKGVFSI----------AFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK------EILSVAFS--- 354 (459)
T ss_pred ---------cccccee----------EecCCCceeeccCccchhheeecccCcEEEEeccccc------ceeeEeEC---
Confidence 4444444 4556799999999999999999999999999998655 47888886
Q ss_pred ccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eC-CCCEEEEEeCCCcEEEEECCCCCCCCCe
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPT 1533 (1620)
Q Consensus 1456 ~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1533 (1620)
|+|-.+|||+.|++++|||+|..+.+.++.+|.+-|+.|. +| .|.+|+|||.|++++||...+. .++.
T Consensus 355 --------PNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~--~~~k 424 (459)
T KOG0272|consen 355 --------PNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW--SPLK 424 (459)
T ss_pred --------CCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc--ccch
Confidence 6778999999999999999999999999999999999999 77 6889999999999999999988 7788
Q ss_pred EeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1534 VFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1534 ~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
++.||.+.|.+ +++|++.++|++.|+ +++|.
T Consensus 425 sLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 425 SLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99999999995 999999999999999 99995
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-37 Score=368.10 Aligned_cols=177 Identities=17% Similarity=0.206 Sum_probs=149.2
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
.+...-|++++.||.|+-|.|.+|++ .++|+.+|||++.+.....+....-++ +||-||+.+.||||
T Consensus 8 ~~tiGpwkLgkTLG~Gstg~vrlakh------~~TGqlaaiKii~k~~~~s~s~~~~Ie-------rEIviMkLi~HpnV 74 (786)
T KOG0588|consen 8 KNTIGPWKLGKTLGKGSTGCVRLAKH------AETGQLAAIKIIPKRSELSSSQPAGIE-------REIVIMKLIEHPNV 74 (786)
T ss_pred cccccceeccccccCCCCceehhhhc------ccccceeEEEeeccccccccccccchh-------hhhHHHHHhcCCCe
Confidence 34477899999999999999999886 478999999999886433332222222 99999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++||++++++.++|+|+||++ |.|++++. .++.+++.+++.+++||+.|+.|||..+|+||||||+|+||+..+ +
T Consensus 75 l~LydVwe~~~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--n 150 (786)
T KOG0588|consen 75 LRLYDVWENKQHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--N 150 (786)
T ss_pred eeeeeeeccCceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--C
Confidence 999999999999999999999 59999998 678899999999999999999999999999999999999999999 7
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
+||+|||+|..-... .+-.+.|| .|.|.+||++.+
T Consensus 151 IKIADFGMAsLe~~g-----------klLeTSCG-SPHYA~PEIV~G 185 (786)
T KOG0588|consen 151 IKIADFGMASLEVPG-----------KLLETSCG-SPHYAAPEIVSG 185 (786)
T ss_pred EeeeccceeecccCC-----------ccccccCC-CcccCCchhhcC
Confidence 999999999832111 11234454 789999998754
No 28
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.2e-37 Score=372.45 Aligned_cols=148 Identities=21% Similarity=0.202 Sum_probs=132.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-c-----cc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-H-----PN 178 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-H-----pN 178 (1620)
+|++++.||+|+||.|.+|.+. .+++.||||+++..+.. ..+.. .|+.||..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~------~T~e~VAIKIiKN~k~f---~~Q~~--------~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH------KTGEIVAIKIIKNKKRF---LRQAQ--------IEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEEEec------CCCcEEEEEeeccChHH---HHHHH--------HHHHHHHHHhccCCCCCee
Confidence 7899999999999999999982 56899999999875433 22333 8999999997 4 38
Q ss_pred ccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
||+++++|...+++|||+|.+..+|+++|+.++...++...++.++.||+.||.+||+.||||+|||||||||.+-+...
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCc
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999998776668
Q ss_pred EEEeecCCccc
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 lKL~DFGla~~ 269 (1620)
|||+|||.|..
T Consensus 330 vKVIDFGSSc~ 340 (586)
T KOG0667|consen 330 IKVIDFGSSCF 340 (586)
T ss_pred eeEEecccccc
Confidence 99999999984
No 29
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=361.79 Aligned_cols=313 Identities=17% Similarity=0.268 Sum_probs=204.6
Q ss_pred EeCCCceeEEeecccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCCC-------CeEEEEEecCCcceeEEEEeeC
Q 000355 1255 WKIKASILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTR-------INCVSGYYGHEEVVNDICVLSS 1326 (1620)
Q Consensus 1255 Wd~~g~~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~t-------g~~l~~l~gH~~~V~sV~f~~~ 1326 (1620)
|+.+|..+..|..|...|..++.++.. .+++|||. ||+||+|+... .++..++.--...+.++.+...
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~----DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSD----DGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN 1109 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecC----CceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC
Confidence 888899999999999999999998776 99999997 99999999743 2344455545678888888888
Q ss_pred CCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEe
Q 000355 1327 SGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI 1404 (1620)
Q Consensus 1327 ~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s 1404 (1620)
+..+ ++.||.|++.++.-......... +..+.+ ....+..+.+.++.
T Consensus 1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~~---------------------~~ri~n----------~~~~g~vv~m~a~~ 1158 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVAT---------------------QVRIPN----------LKKDGVVVSMHAFT 1158 (1431)
T ss_pred CCeEEEEcCCCeEEEEEccccccccceee---------------------eeeccc----------ccCCCceEEeeccc
Confidence 8877 45599999999875211100000 000000 01111122222222
Q ss_pred c-CCC-EEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEE
Q 000355 1405 E-CVE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1482 (1620)
Q Consensus 1405 ~-dg~-~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD 1482 (1620)
. ++. .++.+..-+.|..||+++.....+++... -.+.|+++|.+ |.++|++.|++.|.+.+||
T Consensus 1159 ~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~----~hG~vTSi~id-----------p~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1159 AIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL----RHGLVTSIVID-----------PWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred ccccceeEEEEEeccceEEecchhhhhHHhhhcCc----cccceeEEEec-----------CCceEEEEecCCceEEEEE
Confidence 2 223 67788888999999999876665554332 24568888876 5567999999999999999
Q ss_pred CCCCcEEEEEE-ccCCcEEEEE-eCC---CCEEEEEe--CCCcEEEEECCCCCCCCCeEeecC-----------------
Q 000355 1483 VRSGNVIASWR-AHDGYVTKLA-APE---DHLLVSSS--LDKTLRIWDLRRNWPSQPTVFKGH----------------- 1538 (1620)
Q Consensus 1483 ~~tg~~i~~l~-gH~~~V~sva-spd---g~~LaSgS--~DgtI~IWDl~~~~~~~~~~l~gH----------------- 1538 (1620)
+|=+.++..|. ++..+++.|. +|- ....++++ ..+.|.+|++.++..+. ++-..
T Consensus 1224 LRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~--vl~~s~~~p~ls~~~Ps~~~~k 1301 (1431)
T KOG1240|consen 1224 LRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQT--VLWASDGAPILSYALPSNDARK 1301 (1431)
T ss_pred eecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceE--EEEcCCCCcchhhhcccccCCC
Confidence 99999999997 5668888888 442 24555444 57789999999884322 22211
Q ss_pred CC---CEE-EEeecCCEEEEEeCCc-eEEEeccCCCCC-----------------------CCcce----------eecc
Q 000355 1539 TN---GIS-GFSVWGQDVISISNNK-IGLSSLSKSADE-----------------------DGQHR----------LVPQ 1580 (1620)
Q Consensus 1539 ~~---~V~-afSpdg~~LaSgs~D~-I~vwdl~~~~~~-----------------------~g~~~----------~~~~ 1580 (1620)
.. .+. ++.--+..+.+|+.|. |+.||...+... .|... ...+
T Consensus 1302 p~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t 1381 (1431)
T KOG1240|consen 1302 PDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLT 1381 (1431)
T ss_pred CCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCch
Confidence 01 111 2444466777777666 999997643211 00000 0000
Q ss_pred ----ceeeecCC-----CCccccEEEEEEecCC-CEEEEEeCCCcEEEc
Q 000355 1581 ----KLYMVDNG-----AKNLSVLSSISILPFS-RLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1581 ----kl~~~~~g-----~~h~~~V~svafsPdg-~lLasgs~DG~IrlW 1619 (1620)
+......+ ..|..+|+++++.-+. .+|++++.||.|+||
T Consensus 1382 ~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiW 1430 (1431)
T KOG1240|consen 1382 EALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIW 1430 (1431)
T ss_pred hhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeec
Confidence 00001111 1677889998887544 689999999999999
No 30
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=334.72 Aligned_cols=177 Identities=18% Similarity=0.180 Sum_probs=146.9
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
....+.|++.+.||+|.|+.|+++.+ ..+|+.+|+|++..++....+.++.- +|+.|-+.|+||||
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~------~~tg~~fa~kiin~~k~~~~~~e~l~--------rEarIC~~LqHP~I 72 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVH------KTTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQHPNI 72 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHh------ccchHHHHHHHhhhhhhccccHHHHH--------HHHHHHHhcCCCcE
Confidence 34578899999999999999999875 36789999999988777766555554 99999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-e
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-S 257 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-~ 257 (1620)
|+|++.+......|||+|+|.| +|..-|- ....++|..+..+++||+.||.|||.+||||||+||+|+|+.+... .
T Consensus 73 vrL~~ti~~~~~~ylvFe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A 150 (355)
T KOG0033|consen 73 VRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGA 150 (355)
T ss_pred eehhhhhcccceeEEEEecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCC
Confidence 9999999999999999999996 7766555 2356799999999999999999999999999999999999965432 4
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
-+||+|||+|...... ..-.+..|||.|||||++.
T Consensus 151 ~vKL~~FGvAi~l~~g------------~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 151 AVKLADFGLAIEVNDG------------EAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred ceeecccceEEEeCCc------------cccccccCCCcccCHHHhh
Confidence 7999999999954311 1122345899999998863
No 31
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=363.94 Aligned_cols=175 Identities=17% Similarity=0.134 Sum_probs=147.0
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNI 179 (1620)
-..++|.++++||+|+||+|+++..+ .+++.+|||.++++.+...+..+.+. .|.+|+.... ||.+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k------~~~e~yAIK~LKK~~Il~~d~Ve~~~-------~EkrI~~la~~HPFL 431 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELK------GTNEYYAIKVLKKGDILQRDEVESLM-------CEKRIFELANRHPFL 431 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEc------CCCcEEEEEEeeccceeccccHHHHH-------HHHHHHHHhccCCeE
Confidence 34679999999999999999999862 45789999999998777665555442 8999888775 9999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++|+..|++++++|+||||+.| |+..++ ..+.+++..+++|++.|+.||+|||++|||+||||.+|||+|.+| +
T Consensus 432 ~~L~~~fQT~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG--h 506 (694)
T KOG0694|consen 432 VNLFSCFQTKEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG--H 506 (694)
T ss_pred eecccccccCCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--c
Confidence 9999999999999999999996 733332 467899999999999999999999999999999999999999999 9
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
+||+|||++|........+ .+.| |||.|||||++.
T Consensus 507 ~kiADFGlcKe~m~~g~~T----------sTfC-GTpey~aPEil~ 541 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQGDRT----------STFC-GTPEFLAPEVLT 541 (694)
T ss_pred EEecccccccccCCCCCcc----------cccc-CChhhcChhhhc
Confidence 9999999999654332211 2344 599999999874
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=358.61 Aligned_cols=176 Identities=22% Similarity=0.222 Sum_probs=146.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh--hHHHHHHhcCCCcHhHHHhhccCC-ccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLR-HPN 178 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~~~~~~~~~~~Ei~iL~~l~-HpN 178 (1620)
..++|.+.+.||+|+||+|++|++. .++..||+|++.+.+.... ...+.+. +|+.+++.++ |||
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~------~t~~~vAiKii~~~~~~~~~~~~~~~i~-------rEi~~~~~~~~Hpn 81 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHR------LTGEKVAIKIIDRKKVSSKSQKLDELIK-------REISILRRLRSHPN 81 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeec------cCCCeEEEEEechhcccccccccchhhH-------HHHHHHHHhccCCC
Confidence 3679999999999999999999872 4569999998776533311 2233332 8999999999 999
Q ss_pred ccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC-Cc
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW 256 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-~~ 256 (1620)
|+++++++.+...+|+||||+.| +|.+++.. .+++.|.+++.+++||+.|++|||++||+||||||||||++.+ +
T Consensus 82 I~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~- 158 (370)
T KOG0583|consen 82 IIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG- 158 (370)
T ss_pred EeEEEEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC-
Confidence 99999999999999999999995 99999993 7889999999999999999999999999999999999999999 7
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
++||+|||++..... .+.....+.||+.|+|||++.+
T Consensus 159 -~~Kl~DFG~s~~~~~-----------~~~~l~t~cGsp~Y~aPEvl~~ 195 (370)
T KOG0583|consen 159 -NLKLSDFGLSAISPG-----------EDGLLKTFCGSPAYAAPEVLSG 195 (370)
T ss_pred -CEEEeccccccccCC-----------CCCcccCCCCCcccCCHHHhCC
Confidence 899999999995420 0111222336899999999743
No 33
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-38 Score=340.50 Aligned_cols=210 Identities=19% Similarity=0.198 Sum_probs=183.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|+++++||+|+||+||++.+ ..+|+.+|.|.+.-+....+...+.+ .|+.+|+.|+|||||++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~------~~~g~l~a~K~i~f~~md~k~rq~~v--------~Ei~lLkQL~HpNIVqY 83 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQC------LLDGKLVALKKIQFGMMDAKARQDCV--------KEISLLKQLNHPNIVQY 83 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeee------ccCcchhhhhhcchhhccHHHHHHHH--------HHHHHHHhcCCchHHHH
Confidence 56899999999999999999986 46889999999987666666666666 89999999999999999
Q ss_pred ee-EEEeCCE-EEEEEeCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCceEecC
Q 000355 183 LG-LLKTSGL-ITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS--LG--IAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~-~~~~~~~-~~lV~E~~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~--~g--IiHRDLKP~NILl~~ 253 (1620)
|+ .|..++. ++||||||+ |||.++|++ ...+.++|..++.++.|++.||.+||. .. |+||||||.||+|+.
T Consensus 84 y~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~ 163 (375)
T KOG0591|consen 84 YAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA 163 (375)
T ss_pred HHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC
Confidence 99 5655555 999999999 799999985 345679999999999999999999999 55 999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhccc
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
+| .+||+|||++|..... ..+..+.+|||+||+||++.+.+|+.++|+|+.||+. ||+.+.-.+|.
T Consensus 164 ~g--vvKLGDfGL~r~l~s~-----------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCll-yEMcaL~~PF~ 229 (375)
T KOG0591|consen 164 NG--VVKLGDFGLGRFLSSK-----------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLL-YEMCALQSPFY 229 (375)
T ss_pred CC--ceeeccchhHhHhcch-----------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHH-HHHHhcCCCcc
Confidence 99 8999999999964321 1223456799999999999999999999999999998 99999999999
Q ss_pred CCCCCCC
Q 000355 334 GRRWGDY 340 (1620)
Q Consensus 334 gRs~~dl 340 (1620)
||++-.|
T Consensus 230 g~n~~~L 236 (375)
T KOG0591|consen 230 GDNLLSL 236 (375)
T ss_pred cccHHHH
Confidence 9987555
No 34
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=4.2e-34 Score=310.00 Aligned_cols=280 Identities=19% Similarity=0.240 Sum_probs=249.5
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
..+|.||.+.|++ |++|++. ++|+|.||.+.|||.. +..++.+.-....|..++|+|.|+++|+||. |
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~-----ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGL----d 118 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRR-----IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL----D 118 (343)
T ss_pred EEEecccccceeeeEecCCcCe-----EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCc----C
Confidence 4789999999998 9999997 9999999999999976 7788888888999999999999999999998 8
Q ss_pred cEEEEEeCCCC------eEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCC
Q 000355 1295 GTVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1367 (1620)
Q Consensus 1295 gtVrLWdl~tg------~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~ 1367 (1620)
+...|+++.+. ...+.+.||++.+.++.|.+++..| +|+|.|..+||+++|+.++.|.+|..
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~g----------- 187 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTG----------- 187 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcc-----------
Confidence 99999999855 4567799999999999998877777 88899999999999999999987743
Q ss_pred cccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccc
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1447 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~ 1447 (1620)
.|.++++.|. +++.+++|+.|++.++||+|.+.++++|.+|... |+
T Consensus 188 -------------------DV~slsl~p~---------~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesD------IN 233 (343)
T KOG0286|consen 188 -------------------DVMSLSLSPS---------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESD------IN 233 (343)
T ss_pred -------------------cEEEEecCCC---------CCCeEEecccccceeeeeccCcceeEeecccccc------cc
Confidence 3444444442 7999999999999999999999999999987654 89
Q ss_pred eEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc--cCCcEEEEE-eCCCCEEEEEeCCCcEEEEEC
Q 000355 1448 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA--HDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1524 (1620)
Q Consensus 1448 sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g--H~~~V~sva-spdg~~LaSgS~DgtI~IWDl 1524 (1620)
+|+|. |+|.-+++|++|+++|+||+|....+..+.. -..+|++|+ +..|++|.+|..|.++.+||.
T Consensus 234 sv~ff-----------P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 234 SVRFF-----------PSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred eEEEc-----------cCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 99986 6777999999999999999999999888872 246899999 999999999999999999999
Q ss_pred CCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1525 RRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
-.+ ..+..+.||.+.|+| .+|||..++|||.|. ++||.
T Consensus 303 lk~--e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 303 LKG--ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccc--ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 887 677899999999997 899999999999999 99994
No 35
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=342.73 Aligned_cols=174 Identities=18% Similarity=0.162 Sum_probs=139.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|...+.||+|+||.||++.+. .+|...|||.+....... .+.+. +|+.+|.+++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~------~~g~~~AvK~v~~~~~~~---~~~l~-------~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNK------KTGELMAVKSVELEDSPT---SESLE-------REIRILSRLNHPNIVQY 79 (313)
T ss_pred cchhhhhccccCccceEEEEEEec------CCCcceeeeeeecccchh---HHHHH-------HHHHHHHhCCCCCEEee
Confidence 457888999999999999999972 347899999987652221 22222 99999999999999999
Q ss_pred eeEEEeCC--EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-CCceE
Q 000355 183 LGLLKTSG--LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSW 258 (1620)
Q Consensus 183 ~~~~~~~~--~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~ 258 (1620)
++...... .+++.|||++ |+|.+++..... .+++..++.+.+||++||.|||++|||||||||+|||++. ++ .
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--~ 156 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--D 156 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC--e
Confidence 99855555 6999999999 599999996444 7999999999999999999999999999999999999999 67 8
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+||+|||+++......... .......||+.|||||++
T Consensus 157 ~KlaDFG~a~~~~~~~~~~--------~~~~~~~Gtp~~maPEvi 193 (313)
T KOG0198|consen 157 VKLADFGLAKKLESKGTKS--------DSELSVQGTPNYMAPEVI 193 (313)
T ss_pred EEeccCccccccccccccc--------cccccccCCccccCchhh
Confidence 9999999998543210000 112234578888888875
No 36
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5e-34 Score=325.44 Aligned_cols=153 Identities=20% Similarity=0.238 Sum_probs=135.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||.|.-|+||+|+.. .++..+|+|++.+....... +.. ++..|-+||+.++||.++.||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~------~t~~~fAmKVmdK~~l~~rk--Kl~-----Ra~tE~eIL~~lDHPFlPTLY 143 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELR------GTNCLFAMKVMDKESLASRK--KLK-----RAQTEREILSLLDHPFLPTLY 143 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEec------CCCceEEEEEecHHHHhhhh--HHH-----HHHHHHHHHHhcCCCccchhh
Confidence 48999999999999999999962 34589999999875444321 222 223899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
..|++++..|+|||||+| +|..+.+..+.+.+++..+|+|+.+++.||+|||-.|||.||||||||||-++| +|.|+
T Consensus 144 a~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIMLs 221 (459)
T KOG0610|consen 144 ASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIMLS 221 (459)
T ss_pred heeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEee
Confidence 999999999999999995 999999988999999999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCC
Q 000355 263 DKPLVGFNS 271 (1620)
Q Consensus 263 DFGla~~~~ 271 (1620)
||-|+..+.
T Consensus 222 DFDLS~~~~ 230 (459)
T KOG0610|consen 222 DFDLSLRCP 230 (459)
T ss_pred eccccccCC
Confidence 999998653
No 37
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.3e-35 Score=346.57 Aligned_cols=230 Identities=14% Similarity=0.191 Sum_probs=190.9
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++++.||+|+||.||+|+. ..+|.++|+|++++......+....++ .|-.+|...++|+||+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarK------k~Tg~iyAmK~LkKS~M~~~~Qv~hV~-------aERdiL~~~ds~~vVK 205 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARK------KDTGEIYAMKILKKSEMLKKNQVEHVR-------AERDILAEVDSPWVVK 205 (550)
T ss_pred CcccchhheeeccccceeEEEEEE------ccCCcEEeeecccHHHHHhhhhHHHHH-------HHHHHhhhcCCCcEEE
Confidence 467999999999999999999985 257899999999987666655555554 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
||..|++.+++||||||++| |+..+|. ..+.+++..+++|+.+++.|++.||+.|+|||||||+|+|||..| ++|
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiK 281 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIK 281 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEe
Confidence 99999999999999999995 9999998 678999999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCc------------cc-------CCC--CCCc---------------cceecccccCccchhhhccc
Q 000355 261 ICDKPLVGFNSIADW------------CT-------IPT--SPMI---------------GCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 L~DFGla~~~~~~~~------------~~-------~~~--~~~~---------------~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|+||||+........ .. ... ++.. .......+|||-|||||++.
T Consensus 282 LSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll 361 (550)
T KOG0605|consen 282 LSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL 361 (550)
T ss_pred eccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh
Confidence 999999963221000 00 000 0000 01223578999999999999
Q ss_pred ccccccccccccccccchHHHHhhhhcccCCCCCCCcCCcccceee
Q 000355 305 SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 350 (1620)
Q Consensus 305 ~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~ 350 (1620)
+.+|+..||+|+.|||. ||+|.+..+|.+-+.++. .--|+-|..
T Consensus 362 ~kgY~~~cDwWSLG~Im-yEmLvGyPPF~s~tp~~T-~rkI~nwr~ 405 (550)
T KOG0605|consen 362 GKGYGKECDWWSLGCIM-YEMLVGYPPFCSETPQET-YRKIVNWRE 405 (550)
T ss_pred cCCCCccccHHHHHHHH-HHHHhCCCCCCCCCHHHH-HHHHHHHhh
Confidence 99999999999999998 999999999999876432 223555654
No 38
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1e-32 Score=299.35 Aligned_cols=283 Identities=19% Similarity=0.293 Sum_probs=237.9
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLH 1338 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~ 1338 (1620)
..++|+||.+.|.++.|++|.+.++|+|. ||.+.|||.-|...+..++--...|..++|+|++..+|++ |+...
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSq----DGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQ----DGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCS 122 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeecc----CCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeE
Confidence 34899999999999999999999999998 9999999999999888888889999999999999999665 99999
Q ss_pred EEeCCCCc------eEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE
Q 000355 1339 VWNSQTGK------LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412 (1620)
Q Consensus 1339 IWD~~tg~------~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las 1412 (1620)
||++.+.+ ..+.+.+ |++ .++|..|.+ ...|++
T Consensus 123 iy~ls~~d~~g~~~v~r~l~g------------------------------Htg----------ylScC~f~d-D~~ilT 161 (343)
T KOG0286|consen 123 IYPLSTRDAEGNVRVSRELAG------------------------------HTG----------YLSCCRFLD-DNHILT 161 (343)
T ss_pred EEecccccccccceeeeeecC------------------------------ccc----------eeEEEEEcC-CCceEe
Confidence 99998652 1222222 233 345555555 668999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
+|.|.+..+||+++|+.+..|.+|.+. |-+++++|+ +++++++|+.|++.++||+|.+.++++|
T Consensus 162 ~SGD~TCalWDie~g~~~~~f~GH~gD------V~slsl~p~----------~~ntFvSg~cD~~aklWD~R~~~c~qtF 225 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVFHGHTGD------VMSLSLSPS----------DGNTFVSGGCDKSAKLWDVRSGQCVQTF 225 (343)
T ss_pred cCCCceEEEEEcccceEEEEecCCccc------EEEEecCCC----------CCCeEEecccccceeeeeccCcceeEee
Confidence 999999999999999999999987664 677777542 5689999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEee--cCCCCEE--EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK--GHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~--gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.||+..|++|. .|+|.-++|||+|++.++||++... ++..+. .-..+|+ +||..|++|.+|..|. +.|||..
T Consensus 226 ~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~--~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtl 303 (343)
T KOG0286|consen 226 EGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQ--ELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTL 303 (343)
T ss_pred cccccccceEEEccCCCeeeecCCCceeEEEeecCCc--EEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecc
Confidence 99999999999 9999999999999999999999973 344443 2234566 4999999999998888 9999975
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+. .. ...+ . +|.+.|+++..+|||..++|||+|.+||||.
T Consensus 304 k~-----e~---vg~L----~--GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 304 KG-----ER---VGVL----A--GHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cc-----ce---EEEe----e--ccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 21 11 1112 2 5999999999999999999999999999995
No 39
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-35 Score=318.75 Aligned_cols=203 Identities=21% Similarity=0.255 Sum_probs=176.1
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|+.++.||.|+||.|.+++++ .+|..+|+|++++.+.......+... +|..+|+.+.||++++
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k------~~g~yYAmKvL~k~~vVklKQveH~~-------nEk~vL~~v~~PFlv~ 108 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREK------HSGNYYAMKVLDKQKVVKLKQVEHTH-------NEKRVLKAVSHPFLVK 108 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEc------cCCceeehhhcCHHHHHHHHHHHHHh-------hHHHHHhhccCceeEE
Confidence 3679999999999999999999962 45789999999887666555555553 9999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.|.+.+++||||||.+| .|..+++ +.+++++..+++|+.||+.||+|||+++|++|||||||||||.+| ++|
T Consensus 109 l~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iK 184 (355)
T KOG0616|consen 109 LYGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIK 184 (355)
T ss_pred EEEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEE
Confidence 99999999999999999995 9999999 568899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|+|||+|+...+. ..+-| |||.|+|||++...+|+.++|+|+.|.+. ||++.+..+|...+
T Consensus 185 itDFGFAK~v~~r-------------T~TlC-GTPeYLAPEii~sk~ynkavDWWalGVLI-YEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 185 ITDFGFAKRVSGR-------------TWTLC-GTPEYLAPEIIQSKGYNKAVDWWALGVLI-YEMLAGYPPFYDDN 245 (355)
T ss_pred EEeccceEEecCc-------------EEEec-CCccccChHHhhcCCCCcchhHHHHHHHH-HHHHcCCCCCcCCC
Confidence 9999999954321 12233 59999999999999999999999999665 77776666654433
No 40
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-32 Score=295.06 Aligned_cols=282 Identities=19% Similarity=0.301 Sum_probs=230.7
Q ss_pred cccccccCCCceecc--CCCCCCCCCCeEEEEcCCCCEEEEeCC------CceeEEeecccCcEEEEEEccCCCEEEEec
Q 000355 1217 ATSNLMKCEPWFWFP--TPAASWDGPDFLGRVGGLKDESPWKIK------ASILSSIRAHHGALRSVAVGQDECTVFTAG 1288 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~~--Spdg~~~~~~~lasgS~D~~i~lWd~~------g~~l~tl~gH~~~V~svafspdg~~LaSgs 1288 (1620)
-..++.||++||... .+.+ .+.+.++|.|+++.+|++. |..++.++||+..|..++.++||++.+|||
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~----~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKN----SDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCC----CceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence 356889999999973 3332 3459999999999999976 668999999999999999999999999999
Q ss_pred cCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEE--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCC
Q 000355 1289 IGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1289 ~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~la--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
. |+++|+||+.+|++.+.|.||+..|.+|+|++++++++ |.|+||++||+. |.|..+.....
T Consensus 83 w----D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~----------- 146 (315)
T KOG0279|consen 83 W----DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS----------- 146 (315)
T ss_pred c----cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCC-----------
Confidence 5 99999999999999999999999999999999999994 559999999986 55655554321
Q ss_pred CcccccccccccccccCCCCCeEEEeecCCceEEEEEecC--CCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCC
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC--VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1444 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~d--g~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~ 1444 (1620)
+ .+.|+|+.|+|+ ...|++++.|++||+||+++-+..+.+.+|. .
T Consensus 147 -----------------~----------~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~------~ 193 (315)
T KOG0279|consen 147 -----------------H----------REWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHS------G 193 (315)
T ss_pred -----------------C----------cCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccccc------c
Confidence 0 234677777776 6789999999999999999988887777654 4
Q ss_pred ccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEE
Q 000355 1445 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1523 (1620)
Q Consensus 1445 ~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWD 1523 (1620)
.++.++++ |||...++|+.||.+.+||++.++.+..+. |...|++++ +|+.-.|+ ...+..|+|||
T Consensus 194 ~v~t~~vS-----------pDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~-~at~~sIkIwd 260 (315)
T KOG0279|consen 194 YVNTVTVS-----------PDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLC-AATATSIKIWD 260 (315)
T ss_pred cEEEEEEC-----------CCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEe-eccCCceEEEe
Confidence 57888875 788899999999999999999999988877 789999999 87765544 44566799999
Q ss_pred CCCCCCCCCeEee----cCC---CCEE----EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1524 LRRNWPSQPTVFK----GHT---NGIS----GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1524 l~~~~~~~~~~l~----gH~---~~V~----afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
+.+. ..+.+++ |.+ +.+. +|+.||+.|++|-.|+ |++|.+.
T Consensus 261 l~~~--~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 261 LESK--AVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ccch--hhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 9987 3333332 221 1222 4999999999998877 9999875
No 41
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-33 Score=331.79 Aligned_cols=148 Identities=22% Similarity=0.271 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .++..||+|.++..... .....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEE-GAPCTAI--------REVSLLKNLKHANIVTL 68 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEEC------CCCCEEEEEEecccccC-CcchhHH--------HHHHHHHhCCCCCEeeE
Confidence 678999999999999999999862 35789999998754222 1122233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+++..++||||++++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~ 145 (288)
T cd07871 69 HDIIHTERCLTLVFEYLDSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLA 145 (288)
T ss_pred EEEEcCCCeEEEEEeCCCcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999999874 234578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 146 DfG~~~ 151 (288)
T cd07871 146 DFGLAR 151 (288)
T ss_pred cCccee
Confidence 999987
No 42
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=339.37 Aligned_cols=169 Identities=17% Similarity=0.142 Sum_probs=144.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
...|...++||+|+-|.||.|+. ..+++.||||++...+... ++.+ ++|+.+|+..+|+|||.+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~------~~~~~~VaiK~m~l~~Q~~---keLi-------lnEi~Vm~~~~H~NiVnf 335 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARK------ISTKQEVAIKRMDLRKQPK---KELL-------LNEILVMRDLHHPNIVNF 335 (550)
T ss_pred hhhhcchhhhccccccceeeeee------ccCCceEEEEEEEeccCCc---hhhh-------HHHHHHHHhccchHHHHH
Confidence 44789999999999999999986 2457889999998754433 2333 599999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.|...+.+|+|||||+| +|.+++. ...++|.++..|++++++||+|||.+||||||||.+|||++.+| .+||
T Consensus 336 l~Sylv~deLWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vKl 410 (550)
T KOG0578|consen 336 LDSYLVGDELWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVKL 410 (550)
T ss_pred HHHhcccceeEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEEE
Confidence 9999999999999999995 9999997 44589999999999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+|||++........ ......|||+|||||++
T Consensus 411 tDFGFcaqi~~~~~-----------KR~TmVGTPYWMAPEVv 441 (550)
T KOG0578|consen 411 TDFGFCAQISEEQS-----------KRSTMVGTPYWMAPEVV 441 (550)
T ss_pred eeeeeeeccccccC-----------ccccccCCCCccchhhh
Confidence 99999985432211 12334589999999986
No 43
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-34 Score=329.47 Aligned_cols=185 Identities=19% Similarity=0.163 Sum_probs=138.6
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCC------CcHhHHHhhcc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGV------PSFDESSVPGC 173 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~------~~~~Ei~iL~~ 173 (1620)
....++|++++.||+|.||+|-+|++ ..+++.||||++.+.+...+... .+...+ ...+||.||++
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~------~~~~~l~AiKil~K~~~~~~~~~--~~~~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARD------EVDGKLYAIKILPKKELRRQYGF--PRQPAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEee------cCCCcEEEEEeechhhhhhhccc--ccccccccCcHHHHHHHHHHHHh
Confidence 34467999999999999999999997 35689999999987543322110 000000 12489999999
Q ss_pred CCcccccceeeEEEeC--CEEEEEEeCCC-CCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 174 LRHPNVAPVLGLLKTS--GLITSVIPKTP-YTLENILQFSPNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 174 l~HpNIv~l~~~~~~~--~~~~lV~E~~~-g~L~~~l~~~~~~~-l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
|+|||||+|+++..+. +++|||+|||. |.+...= .... +++.++|.|+++++.||+|||.+|||||||||+|+
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL 241 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence 9999999999999876 48999999998 4443322 3444 89999999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
||+++| ++||+|||.+-....... .....+.....|||.|||||..
T Consensus 242 Ll~~~g--~VKIsDFGVs~~~~~~~~------~~~d~~L~~tvGTPAF~APE~c 287 (576)
T KOG0585|consen 242 LLSSDG--TVKISDFGVSNEFPQGSD------EGSDDQLSRTVGTPAFFAPELC 287 (576)
T ss_pred EEcCCC--cEEeeccceeeecccCCc------cccHHHHhhcCCCccccchHhh
Confidence 999999 999999999874321100 0000111224577777877764
No 44
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.7e-33 Score=331.00 Aligned_cols=148 Identities=22% Similarity=0.272 Sum_probs=129.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|++....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK------VNGKLVALKVIRLQEEEG-TPFTAI--------REASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC------CCCCEEEEEEeccccccc-cchhHH--------HHHHHHhhCCCCCcCeE
Confidence 578999999999999999999972 357899999987543221 112223 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+++..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 145 (303)
T cd07869 69 HDIIHTKETLTLVFEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLA 145 (303)
T ss_pred EEEEecCCeEEEEEECCCcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999998874 345688999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 146 Dfg~~~ 151 (303)
T cd07869 146 DFGLAR 151 (303)
T ss_pred CCCcce
Confidence 999987
No 45
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-32 Score=291.57 Aligned_cols=293 Identities=17% Similarity=0.233 Sum_probs=239.6
Q ss_pred eeEEeecccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCC-----CCeEEEEEecCCcceeEEEEeeCCCeE--EE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELT-----RINCVSGYYGHEEVVNDICVLSSSGRI--AS 1332 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~-----tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS 1332 (1620)
+..+++||++.|+.++..+.+ +.+++++. |+++.+|++. .|..++.|+||+..|+.+..++++++. +|
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasr----Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASR----DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEccc----ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence 457899999999999998874 78888887 9999999874 567899999999999999999999987 66
Q ss_pred eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE
Q 000355 1333 CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412 (1620)
Q Consensus 1333 ~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las 1412 (1620)
.|+++++||+.+|+..+.|.+|..+ |.++++++|+..+++
T Consensus 83 wD~~lrlWDl~~g~~t~~f~GH~~d----------------------------------------Vlsva~s~dn~qivS 122 (315)
T KOG0279|consen 83 WDGTLRLWDLATGESTRRFVGHTKD----------------------------------------VLSVAFSTDNRQIVS 122 (315)
T ss_pred ccceEEEEEecCCcEEEEEEecCCc----------------------------------------eEEEEecCCCceeec
Confidence 7999999999999999999887533 677788888999999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
|+.|++|++||... .+..+...+. +..+|+|++|+|... ..+|++++.|++|++||+++.+....+
T Consensus 123 GSrDkTiklwnt~g-~ck~t~~~~~----~~~WVscvrfsP~~~---------~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 123 GSRDKTIKLWNTLG-VCKYTIHEDS----HREWVSCVRFSPNES---------NPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred CCCcceeeeeeecc-cEEEEEecCC----CcCcEEEEEEcCCCC---------CcEEEEccCCceEEEEccCCcchhhcc
Confidence 99999999999864 4544444322 267899999987542 358999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCceEEEeccCCC
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNKIGLSSLSKSA 1569 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~ 1569 (1620)
.||.+.|+.++ +|||.+++||+.||.+.+||++.+ +.++++ +|...|. +|+|+.-.|+.+.+..|++||++...
T Consensus 189 ~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~--k~lysl-~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG--KNLYSL-EAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred ccccccEEEEEECCCCCEEecCCCCceEEEEEccCC--ceeEec-cCCCeEeeEEecCCceeEeeccCCceEEEeccchh
Confidence 99999999999 999999999999999999999998 455554 5778888 49999989988888889999987322
Q ss_pred CCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1570 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1570 ~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
-.+.-. .+.... ......-...+++|++||..|.+|-.||.|++|
T Consensus 266 ~v~~l~----~d~~g~-s~~~~~~~clslaws~dG~tLf~g~td~~irv~ 310 (315)
T KOG0279|consen 266 VVEELK----LDGIGP-SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVW 310 (315)
T ss_pred hhhhcc----cccccc-ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEE
Confidence 111000 000000 000122346789999999999999999999999
No 46
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.4e-33 Score=309.85 Aligned_cols=290 Identities=18% Similarity=0.279 Sum_probs=253.8
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
.+.+.||...|+. |.|+-.. ++++|.|.++++||.. |++...|+||+++|.+|+|+..|++++++|. |
T Consensus 101 ~~~l~g~r~~vt~v~~hp~~~~-----v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSs----D 171 (406)
T KOG0295|consen 101 VQKLAGHRSSVTRVIFHPSEAL-----VVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSS----D 171 (406)
T ss_pred hhhhhccccceeeeeeccCceE-----EEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCC----c
Confidence 3456678888886 7777765 9999999999999988 8899999999999999999999999999998 7
Q ss_pred cEEEEEeCCC-CeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccc
Q 000355 1295 GTVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371 (1620)
Q Consensus 1295 gtVrLWdl~t-g~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~ 1371 (1620)
-.+++||..+ .+|++.+.||+..|.+|+|.|-|.++.|| |.+|+.|++.+|-|+.++.+|.
T Consensus 172 l~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~---------------- 235 (406)
T KOG0295|consen 172 LSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHS---------------- 235 (406)
T ss_pred cchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCch----------------
Confidence 8899999987 67888999999999999999999999766 9999999999999999998763
Q ss_pred cccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEee
Q 000355 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1451 (1620)
Q Consensus 1372 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~ 1451 (1620)
.+|..++++.||..+++|+.|.+|++|-+.++++...++.|.. .|.+++|
T Consensus 236 ------------------------ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh------~vEci~w 285 (406)
T KOG0295|consen 236 ------------------------EWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEH------PVECIAW 285 (406)
T ss_pred ------------------------HhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcccc------ceEEEEe
Confidence 2466677778899999999999999999999998888887654 3788888
Q ss_pred eCCCccccC----cccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCC
Q 000355 1452 CGSEKMQAG----GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1452 ~~~~~~~~~----g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~ 1526 (1620)
.+....+.. +-...+.++++|+.|++|++||+.+|.++.++.||.++|..++ +|.|++|+|+.+|+++++||+++
T Consensus 286 ap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 286 APESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred cccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 766543221 1112346999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1527 NWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1527 ~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
. ++..++..|..-|++ |.-+..+++||+-|. +++|.
T Consensus 366 ~--~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 366 L--QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred c--eeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 8 778889999998886 666778999999988 99996
No 47
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-33 Score=334.41 Aligned_cols=175 Identities=20% Similarity=0.209 Sum_probs=146.6
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNI 179 (1620)
.....|++.+.||+|.||.||+|+++ .+|..+|+|.+.+.+.......+.++ +|+++|+.+. ||||
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~------~tg~~~A~K~i~k~~~~~~~~~~~v~-------~Ev~il~~l~~hpni 98 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREK------STGKEVACKVIPKRKLRGKEDREDVR-------REVAILQQLSGHPNI 98 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEec------CCCceeEEEEeehhhccccccHHHHH-------HHHHHHHhccCCCCE
Confidence 34668999999999999999999973 35899999999886655433333343 9999999998 9999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc--
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-- 256 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-- 256 (1620)
|.++++|++.+.+++|||+|. |+|.+.|... .+++.++..+++|++.|+.|||+.||+||||||+|+|+.....
T Consensus 99 v~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~ 175 (382)
T KOG0032|consen 99 VQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGS 175 (382)
T ss_pred EEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCC
Confidence 999999999999999999999 4999999854 3999999999999999999999999999999999999976532
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
..+|++|||+|+.... +.......||+.|+|||++
T Consensus 176 ~~ik~~DFGla~~~~~------------~~~~~~~~Gtp~y~APEvl 210 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIKP------------GERLHTIVGTPEYVAPEVL 210 (382)
T ss_pred CcEEEeeCCCceEccC------------CceEeeecCCccccCchhh
Confidence 3799999999995432 1123344578999999886
No 48
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.2e-33 Score=334.82 Aligned_cols=147 Identities=23% Similarity=0.345 Sum_probs=126.8
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|++. .++..||||.+...........++. +|+++|+.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT------HTGEKVAIKKINDVFEHVSDATRIL--------REIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEechhhccchhHHHHH--------HHHHHHHhCCCCCEeeecc
Confidence 5899999999999999999962 4678999999875322223333344 8999999999999999999
Q ss_pred EEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 185 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 185 ~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++...+ .+|+|||||+++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 142 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KL 142 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cE
Confidence 986543 589999999999999997 345689999999999999999999999999999999999999999 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||+++.
T Consensus 143 kL~Dfg~~~~ 152 (338)
T cd07859 143 KICDFGLARV 152 (338)
T ss_pred EEccCccccc
Confidence 9999999983
No 49
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-35 Score=314.06 Aligned_cols=177 Identities=18% Similarity=0.205 Sum_probs=145.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccC-Ccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNV 179 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNI 179 (1620)
-.+|+..+.||+|..++|.+|.++ ++|..+|+|++....... +...+.++ ...+|+.||+++ .||||
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k------~t~~e~a~kii~~~at~~~~e~~~~~~E----aT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHK------ETGKEFAVKIIDVTATTESGETPYEMRE----ATRQEISILRQVMGHPYI 85 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhc------ccccceeEEEEEecccccCCccHHHHHH----HHHHHHHHHHHhcCCCcE
Confidence 457888999999999999988762 567889999987532221 11222221 234899999998 69999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++.++|+++..+++|+|.|+ |.|++++. ..-.++|.+.+.||+|++.|+.|||.++|+||||||+|||++++. +
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--~ 161 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--N 161 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc--c
Confidence 999999999999999999999 89999998 567899999999999999999999999999999999999999999 8
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 305 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~ 305 (1620)
+||+|||+|.......+ .....|||.|.|||.+..
T Consensus 162 i~isDFGFa~~l~~Gek------------LrelCGTPgYLAPEtikC 196 (411)
T KOG0599|consen 162 IKISDFGFACQLEPGEK------------LRELCGTPGYLAPETIKC 196 (411)
T ss_pred eEEeccceeeccCCchh------------HHHhcCCCcccChhheee
Confidence 99999999996532221 112236999999998753
No 50
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-33 Score=317.87 Aligned_cols=182 Identities=14% Similarity=0.115 Sum_probs=151.6
Q ss_pred cccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcc
Q 000355 98 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 177 (1620)
Q Consensus 98 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp 177 (1620)
.+....++|++..+||.|.-++||+|+. ...+..||||++..++.... . +.++ +|++.|+.++||
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c------~p~~e~VAIK~inLEkc~~~-l-d~l~-------kE~~~msl~~HP 84 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARC------IPTNEVVAIKIINLEKCNND-L-DALR-------KEVQTMSLIDHP 84 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeee------cccCCEEEEEEeehhhhhhh-H-HHHH-------HHHHHhhhcCCC
Confidence 3444577999999999999999999985 35679999999987655443 3 3333 999999999999
Q ss_pred cccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
||++++..|..+..+|+||+||. |++.++++..-...+.|..+..|++++++||.|||.+|.||||||+.||||+.+|
T Consensus 85 NIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG- 163 (516)
T KOG0582|consen 85 NIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG- 163 (516)
T ss_pred CcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC-
Confidence 99999999999999999999999 6999999975556689999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.|||+|||.+....... .+.........||+.|||||++
T Consensus 164 -~VkLadFgvsa~l~~~G-------~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 164 -TVKLADFGVSASLFDSG-------DRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred -cEEEcCceeeeeecccC-------ceeeEeeccccCcccccChHHh
Confidence 89999999887543221 1111111455678888888875
No 51
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.3e-32 Score=328.56 Aligned_cols=360 Identities=21% Similarity=0.264 Sum_probs=264.3
Q ss_pred CCCcee--ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCC--EEEEeccCCCCCcEEE
Q 000355 1224 CEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKGTVQ 1298 (1620)
Q Consensus 1224 H~~~V~--~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~--~LaSgs~d~~~DgtVr 1298 (1620)
|+..|. +|+|.|.. +++||.|+.+++||+. +.+.+.|+||.+.|.++.|+|+.. .|++|+. |++|+
T Consensus 104 He~Pvi~ma~~~~g~L-----lAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~----D~~v~ 174 (775)
T KOG0319|consen 104 HEAPVITMAFDPTGTL-----LATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGAT----DGTVR 174 (775)
T ss_pred cCCCeEEEEEcCCCce-----EEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCC----CceEE
Confidence 888776 48888865 9999999999999999 789999999999999999999874 5788886 99999
Q ss_pred EEeCCCC-eEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEecc----------C----------
Q 000355 1299 KWELTRI-NCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQ----------S---------- 1355 (1620)
Q Consensus 1299 LWdl~tg-~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~----------~---------- 1355 (1620)
+||+.+. .|+.++.+|...|++++|.+++..+ ++.|..+.|||+.+-++..++..- .
T Consensus 175 vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~ 254 (775)
T KOG0319|consen 175 VWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYII 254 (775)
T ss_pred EEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEE
Confidence 9999854 4688899999999999999998877 455999999998755443332210 0
Q ss_pred -----Ccccc----------c-cCC-C-------------CCcccccccccccc---------cccCCCCCeEEEeecC-
Q 000355 1356 -----MDSLH----------G-GSP-S-------------SSISKINTDQVGML---------NSNTLSSGILSTAFDG- 1395 (1620)
Q Consensus 1356 -----~~~~~----------~-~s~-s-------------~~~~~~~~~~~~~~---------~~~~~s~~v~sv~f~~- 1395 (1620)
+.... . ..+ + ....+........+ ...+..+.|.++.|-+
T Consensus 255 TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~ 334 (775)
T KOG0319|consen 255 TAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGP 334 (775)
T ss_pred EecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCC
Confidence 00000 0 000 0 00000000000001 0012223333333322
Q ss_pred -------------------------------CceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCC
Q 000355 1396 -------------------------------NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1444 (1620)
Q Consensus 1396 -------------------------------~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~ 1444 (1620)
..|.++....+|..+++|+.|+++++|.+..+........ ...+|.+
T Consensus 335 e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a--~~~gH~~ 412 (775)
T KOG0319|consen 335 EESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVA--QANGHTN 412 (775)
T ss_pred ccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhh--hhccccc
Confidence 1234455556778999999999999998855433221111 1124666
Q ss_pred ccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc-----EE----EEEEccCCcEEEEE-eCCCCEEEEEe
Q 000355 1445 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-----VI----ASWRAHDGYVTKLA-APEDHLLVSSS 1514 (1620)
Q Consensus 1445 ~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~-----~i----~~l~gH~~~V~sva-spdg~~LaSgS 1514 (1620)
.|.+|+++.... .+++++|.|+++++|++...+ .+ .+...|+..|++|+ +|+.++++|||
T Consensus 413 svgava~~~~~a----------sffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~S 482 (775)
T KOG0319|consen 413 SVGAVAGSKLGA----------SFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGS 482 (775)
T ss_pred ccceeeecccCc----------cEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecc
Confidence 788999854322 699999999999999998621 11 13358999999999 99999999999
Q ss_pred CCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCc
Q 000355 1515 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1591 (1620)
Q Consensus 1515 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1591 (1620)
.|++.+||++.+. ....++.||+.+|.| |++..+.++|+|.|+ |++|.++ +..+ .+.++ ||
T Consensus 483 qDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is-----~fSC----lkT~e-----GH 546 (775)
T KOG0319|consen 483 QDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS-----TFSC----LKTFE-----GH 546 (775)
T ss_pred cccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec-----ccee----eeeec-----Cc
Confidence 9999999999966 677899999999997 999999999999999 9999997 2222 23332 69
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1592 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1592 ~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+.|..+.|-.+|+.|++|+.||.||||+
T Consensus 547 ~~aVlra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 547 TSAVLRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred cceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence 99999999999999999999999999996
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=7.7e-33 Score=327.33 Aligned_cols=149 Identities=17% Similarity=0.185 Sum_probs=128.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.+...........+.+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR------ISEHYYALKVMAIPEVIRLKQEQHVH-------NEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhhHHHHHHH-------HHHHHHHhCCCCcHhhhH
Confidence 47899999999999999999962 35789999998653222211222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+|+||||++ |+|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~ 143 (291)
T cd05612 68 WTEHDQRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLT 143 (291)
T ss_pred hhhccCCeEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEE
Confidence 99999999999999998 49999998 355789999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 144 Dfg~~~~ 150 (291)
T cd05612 144 DFGFAKK 150 (291)
T ss_pred ecCcchh
Confidence 9999883
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.5e-33 Score=332.03 Aligned_cols=142 Identities=21% Similarity=0.198 Sum_probs=123.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|++........ ....++ +|+++|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREK------ATGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCCCEEEEEEc
Confidence 46999999999999862 4678999999875432221 222333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a 142 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCC
Confidence 9999999999995 9999987 456789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 143 ~~ 144 (323)
T cd05571 143 KE 144 (323)
T ss_pred cc
Confidence 73
No 54
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.5e-32 Score=342.91 Aligned_cols=146 Identities=21% Similarity=0.252 Sum_probs=123.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|.+. .+++.||||++..... ... +|+.+|+.++|||||++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~-------~~~-------~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI------DTSEKVAIKKVLQDPQ-------YKN-------RELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEecCcc-------hHH-------HHHHHHHhcCCCCCcce
Confidence 458999999999999999999862 4578999998864321 111 79999999999999999
Q ss_pred eeEEEeC--------CEEEEEEeCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 183 LGLLKTS--------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~~~~~--------~~~~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
+++|... ..+++||||++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence 9987543 25789999999999888763 2356789999999999999999999999999999999999998
Q ss_pred CCCceEEEEeecCCccc
Q 000355 253 DSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~ 269 (1620)
.++. .+||+|||+|+.
T Consensus 205 ~~~~-~vkL~DFGla~~ 220 (440)
T PTZ00036 205 PNTH-TLKLCDFGSAKN 220 (440)
T ss_pred CCCC-ceeeeccccchh
Confidence 6652 699999999984
No 55
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-32 Score=330.79 Aligned_cols=149 Identities=16% Similarity=0.139 Sum_probs=130.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|.+........ ....+. +|+.+|+.++||||++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHK------GTGEYYAIKCLKKREILKMKQVQHVA--------QEKSILMELSHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH--------HHHHHHHhCCCCCCCc
Confidence 678999999999999999999862 3578999999875432221 122233 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~k 158 (329)
T PTZ00263 83 MMCSFQDENRVYFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVK 158 (329)
T ss_pred EEEEEEcCCEEEEEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CEE
Confidence 99999999999999999985 9999998 356789999999999999999999999999999999999999999 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||+++.
T Consensus 159 l~Dfg~~~~ 167 (329)
T PTZ00263 159 VTDFGFAKK 167 (329)
T ss_pred EeeccCceE
Confidence 999999983
No 56
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=282.53 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=227.8
Q ss_pred CeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe--EEEEEecCCcc
Q 000355 1241 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEV 1317 (1620)
Q Consensus 1241 ~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~--~l~~l~gH~~~ 1317 (1620)
-+|+|+|.|.+||+|.+. |.|.++++.-.+.|+.+...||++.||+|+. ..||++|+.+++ ++.+|.+|++.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----qhvRlyD~~S~np~Pv~t~e~h~kN 85 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----QHVRLYDLNSNNPNPVATFEGHTKN 85 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----CeeEEEEccCCCCCceeEEeccCCc
Confidence 459999999999999988 9999999977888999999999999999995 899999998875 58999999999
Q ss_pred eeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecC
Q 000355 1318 VNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDG 1395 (1620)
Q Consensus 1318 V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~ 1395 (1620)
|++|.|..+|+.+ +|.||++||||++.-.+.+.++..
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~----------------------------------------- 124 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN----------------------------------------- 124 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC-----------------------------------------
Confidence 9999999999988 455999999999987666655422
Q ss_pred CceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecC
Q 000355 1396 NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS 1475 (1620)
Q Consensus 1396 ~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~D 1475 (1620)
..|+++..+|+...+++|..+|.|++||+++..+.+.+-.... ..|+++... |+|+.++++...
T Consensus 125 spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~-----~~i~sl~v~-----------~dgsml~a~nnk 188 (311)
T KOG0315|consen 125 SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDD-----TSIQSLTVM-----------PDGSMLAAANNK 188 (311)
T ss_pred CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCC-----cceeeEEEc-----------CCCcEEEEecCC
Confidence 2367788888899999999999999999998877766653322 236666653 788999999999
Q ss_pred CcEEEEECCCC------cEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEe
Q 000355 1476 GQCRLFDVRSG------NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFS 1546 (1620)
Q Consensus 1476 g~I~lwD~~tg------~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afS 1546 (1620)
|.+++|++-++ +++.++++|.+.+..+. +||+++||++|.|++++||+..+. .+....++||...|. +||
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeec
Confidence 99999998764 36777899999999888 999999999999999999999886 345568899999999 399
Q ss_pred ecCCEEEEEeCCc-eEEEecc
Q 000355 1547 VWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1547 pdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.||++|++|+.|+ +++|+++
T Consensus 268 ~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 268 ADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred cCccEEEecCCCCceeecccc
Confidence 9999999999999 9999987
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.7e-32 Score=329.87 Aligned_cols=151 Identities=19% Similarity=0.185 Sum_probs=129.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
..++|++.+.||+|+||.||+|.+.. ..+..||+|.+......... ...+. +|+.+++.++||||+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~Iv 94 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKN-----EDFPPVAIKRFEKSKIIKQKQVDHVF--------SERKILNYINHPFCV 94 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEEC-----CCCeEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhCCCCCCc
Confidence 36689999999999999999998521 23468999998654332222 22233 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++.+.+.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 95 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~i 170 (340)
T PTZ00426 95 NLYGSFKDESYLYLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FI 170 (340)
T ss_pred ceEEEEEeCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CE
Confidence 99999999999999999998 59999998 356789999999999999999999999999999999999999998 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||+++.
T Consensus 171 kL~DFG~a~~ 180 (340)
T PTZ00426 171 KMTDFGFAKV 180 (340)
T ss_pred EEecCCCCee
Confidence 9999999984
No 58
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.2e-32 Score=322.68 Aligned_cols=151 Identities=22% Similarity=0.244 Sum_probs=124.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC---Cccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv 180 (1620)
.+|++++.||+|+||+||+|++.. ..+..+|+|.+............+. +|+.+++.+ +||||+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~hpniv 67 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPNVV 67 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcC-----CCCeEEEEEEEecccCCCCchHHHH--------HHHHHHHhhcccCCCCcc
Confidence 379999999999999999998622 2467899999876433322222333 666666555 799999
Q ss_pred ceeeEEEe-----CCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 181 PVLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 181 ~l~~~~~~-----~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
++++++.. ...+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 68 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred eEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence 99999863 3579999999999999999865556689999999999999999999999999999999999999998
Q ss_pred ceEEEEeecCCccc
Q 000355 256 WSWLYICDKPLVGF 269 (1620)
Q Consensus 256 ~~~lKL~DFGla~~ 269 (1620)
.+||+|||+++.
T Consensus 148 --~~kl~Dfg~~~~ 159 (290)
T cd07862 148 --QIKLADFGLARI 159 (290)
T ss_pred --CEEEccccceEe
Confidence 899999999973
No 59
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.2e-32 Score=320.83 Aligned_cols=149 Identities=18% Similarity=0.262 Sum_probs=127.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|++. .+++.+|+|++............+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHK------ETKEIVAIKKFKDSEENEEVKETTL--------RELKMLRTLKQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEEC------CCCcEEEEEEEecccccccchhhHH--------HHHHHHHhCCCccccchh
Confidence 47999999999999999999972 3578899999876533332223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+++..++.+|+||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~D 143 (287)
T cd07848 67 EAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCD 143 (287)
T ss_pred hhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEee
Confidence 99999999999999999866666653 245689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000355 264 KPLVGF 269 (1620)
Q Consensus 264 FGla~~ 269 (1620)
||+++.
T Consensus 144 fg~~~~ 149 (287)
T cd07848 144 FGFARN 149 (287)
T ss_pred ccCccc
Confidence 999983
No 60
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=1.1e-30 Score=301.51 Aligned_cols=377 Identities=16% Similarity=0.151 Sum_probs=281.1
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
.+.||+..|++ |-|.-.+ -++|||.|++|.+|+-. -+.-.+++.|+.-|+||+|+|||++++|+|. ||+
T Consensus 142 ei~GhSr~ins~~~KpsRPf----Ri~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs----Dgk 213 (603)
T KOG0318|consen 142 EITGHSRRINSVDFKPSRPF----RIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS----DGK 213 (603)
T ss_pred eeeccceeEeeeeccCCCce----EEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC----Ccc
Confidence 36789999986 4444433 29999999999999855 5567788999999999999999999999998 999
Q ss_pred EEEEeCCCCeEEEEEe---cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCc----cccccCCCCC
Q 000355 1297 VQKWELTRINCVSGYY---GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD----SLHGGSPSSS 1367 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~---gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~----~~~~~s~s~~ 1367 (1620)
|.+||-.+|+.+..+. +|++.|.+++|+|++.++ +|+|.++||||+.++++++++...... ....+..+.-
T Consensus 214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~l 293 (603)
T KOG0318|consen 214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHL 293 (603)
T ss_pred EEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeE
Confidence 9999999999999998 899999999999999998 566999999999999999998765431 1111111111
Q ss_pred cccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE-----------eeCC
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-----------WRGE 1436 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~-----------l~~~ 1436 (1620)
+++...+..+.++....+ ....+.=+.+.++++..++++++|++|+.||.|.-||..+|..-+. +..+
T Consensus 294 ItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~ 372 (603)
T KOG0318|consen 294 ITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAAS 372 (603)
T ss_pred EEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeec
Confidence 222222333444443333 3344444566799999999999999999999999999987743211 1111
Q ss_pred C-c---c----------------------cccCCccceEeeeCCCc---------------------------cccCccc
Q 000355 1437 P-T---E----------------------LGFPSLVSAICACGSEK---------------------------MQAGGAV 1463 (1620)
Q Consensus 1437 ~-~---~----------------------v~~~~~V~sva~~~~~~---------------------------~~~~g~~ 1463 (1620)
. . . +.......++|...... -++...+
T Consensus 373 ~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~ 452 (603)
T KOG0318|consen 373 ESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVS 452 (603)
T ss_pred CCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEc
Confidence 1 0 0 00111112222222110 0223457
Q ss_pred CCCCEEEEEecCCcEEEEECCCCcE--EEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGNV--IASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540 (1620)
Q Consensus 1464 p~g~~LasGs~Dg~I~lwD~~tg~~--i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~ 1540 (1620)
|+++.+|.|+.||.|++|.+..++. ......|.++|++|+ +||+.+||+|...+.|.+||+.+... ....+.-|+.
T Consensus 453 ~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~~~~w~FHta 531 (603)
T KOG0318|consen 453 PDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-KTNRWAFHTA 531 (603)
T ss_pred CCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-ecceeeeeee
Confidence 8999999999999999999986553 334557999999999 99999999999999999999998753 4456666999
Q ss_pred CEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEE
Q 000355 1541 GISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1617 (1620)
Q Consensus 1541 ~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Ir 1617 (1620)
.|.| |+|+.+++||||-|. |.||++.++.+ .... .+ .|...|+.+.|. |...+++.|.|-.||
T Consensus 532 kI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~-----------~i~i-kn-AH~~gVn~v~wl-de~tvvSsG~Da~iK 597 (603)
T KOG0318|consen 532 KINCVAWSPNNKLVATGSLDTNVIIYSVKKPAK-----------HIII-KN-AHLGGVNSVAWL-DESTVVSSGQDANIK 597 (603)
T ss_pred eEEEEEeCCCceEEEeccccceEEEEEccChhh-----------heEe-cc-ccccCceeEEEe-cCceEEeccCcceeE
Confidence 9995 999999999999999 99999985432 1111 12 477779999998 556788999999999
Q ss_pred EcC
Q 000355 1618 LCC 1620 (1620)
Q Consensus 1618 lWd 1620 (1620)
+|.
T Consensus 598 ~W~ 600 (603)
T KOG0318|consen 598 VWN 600 (603)
T ss_pred Eec
Confidence 995
No 61
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=1.2e-31 Score=296.49 Aligned_cols=294 Identities=21% Similarity=0.336 Sum_probs=246.6
Q ss_pred EeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe-
Q 000355 1255 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC- 1333 (1620)
Q Consensus 1255 Wd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~- 1333 (1620)
|...-+..+.+.||.+.|+||++.|-+++++|||. |++|+|||+.+|+...++.||...|..|++++...++.|+
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~g 212 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSA----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAG 212 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCC----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEec
Confidence 44444567889999999999999999999999998 9999999999999999999999999999999999999555
Q ss_pred -CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEE
Q 000355 1334 -DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1412 (1620)
Q Consensus 1334 -DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~las 1412 (1620)
|+.|+.||+...+.++.+.+|-. .|.|++.+|.-+.+++
T Consensus 213 edk~VKCwDLe~nkvIR~YhGHlS----------------------------------------~V~~L~lhPTldvl~t 252 (460)
T KOG0285|consen 213 EDKQVKCWDLEYNKVIRHYHGHLS----------------------------------------GVYCLDLHPTLDVLVT 252 (460)
T ss_pred CCCeeEEEechhhhhHHHhccccc----------------------------------------eeEEEeccccceeEEe
Confidence 99999999999999988877631 2667777777889999
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1413 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
|+.|.++|+||+++...++.+.||... |.+|.+.+.+ ..+++||.|++|++||++.|+.+.++
T Consensus 253 ~grDst~RvWDiRtr~~V~~l~GH~~~------V~~V~~~~~d-----------pqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 253 GGRDSTIRVWDIRTRASVHVLSGHTNP------VASVMCQPTD-----------PQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred cCCcceEEEeeecccceEEEecCCCCc------ceeEEeecCC-----------CceEEecCCceEEEeeeccCceeEee
Confidence 999999999999999999999987664 5666654322 36999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeec-CCEEEEEeCCc-eEEEeccCCC
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW-GQDVISISNNK-IGLSSLSKSA 1569 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpd-g~~LaSgs~D~-I~vwdl~~~~ 1569 (1620)
..|...|++++ +|....+||+|.| .|+.|++..+ ..+..+.+|+..|++++-+ ...+++|++++ +..||.....
T Consensus 316 t~hkksvral~lhP~e~~fASas~d-nik~w~~p~g--~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~ 392 (460)
T KOG0285|consen 316 THHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG--EFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGH 392 (460)
T ss_pred ecccceeeEEecCCchhhhhccCCc-cceeccCCcc--chhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCc
Confidence 99999999999 9999999999988 5999999988 5566799999999986665 45778899999 9999986321
Q ss_pred CCC-CcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1570 DED-GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1570 ~~~-g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
..+ ++..+.+..+ .....|.+.+|...|..|++|..|.+|++|
T Consensus 393 nyQ~~~t~vqpGSl-------~sEagI~as~fDktg~rlit~eadKtIk~~ 436 (460)
T KOG0285|consen 393 NYQRGQTIVQPGSL-------ESEAGIFASCFDKTGSRLITGEADKTIKMY 436 (460)
T ss_pred ccccccccccCCcc-------ccccceeEEeecccCceEEeccCCcceEEE
Confidence 111 1111111111 234569999999999999999999999998
No 62
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.7e-32 Score=334.34 Aligned_cols=183 Identities=14% Similarity=0.134 Sum_probs=149.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|.+. .+++.||+|..... .+. +|+++|+.++|||||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~------~~~~~vaiK~~~~~--------~~~--------~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDN------KTCEHVVIKAGQRG--------GTA--------TEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEEC------CCCCEEEEechhhh--------hhH--------HHHHHHHhCCCCCCCCE
Confidence 457999999999999999999972 45788999975321 122 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++|..+...++|||++.++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 149 ~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~ 224 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYKTDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLG 224 (391)
T ss_pred eEEEEECCeeEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEE
Confidence 999999999999999999999999873 45688999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||+|+........ ......||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 225 DFG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 273 (391)
T PHA03212 225 DFGAACFPVDINAN----------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVL 273 (391)
T ss_pred eCCccccccccccc----------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHH
Confidence 99999742111000 01122367788888877766667777777777554
No 63
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.1e-32 Score=320.06 Aligned_cols=149 Identities=15% Similarity=0.076 Sum_probs=128.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|+..+.||+|+||+||+|.+ ..+++.||+|.+......... ...+. +|+++++.++|+||++++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~------~~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~iv~~~ 66 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQV------RATGKMYACKKLEKKRIKKRKGEAMAL--------NEKRILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCEEEEEEEE------ecCCceEEEEEeeHhhhhhhhhHHHHH--------HHHHHHHhcCCCcEEEEE
Confidence 378899999999999999986 246789999998764332222 12233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+++||||++ |+|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~ 144 (285)
T cd05631 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRIS 144 (285)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 5998888654455689999999999999999999999999999999999999988 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 145 Dfg~~~~ 151 (285)
T cd05631 145 DLGLAVQ 151 (285)
T ss_pred eCCCcEE
Confidence 9999874
No 64
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.2e-30 Score=290.88 Aligned_cols=324 Identities=16% Similarity=0.205 Sum_probs=269.3
Q ss_pred hhcccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1215 QEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1215 ~~~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
....+++.+|++.|++ .+|+..| +||||.|....+|++. |.....+.||.++|.++.||.||.+||||+.
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l-----~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdm-- 126 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNL-----VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDM-- 126 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCce-----EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCC--
Confidence 4557889999999997 6787777 9999999999999998 8899999999999999999999999999998
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
+|.|+||...++.....+.+--+.+.-+.|+|.+..+ ++.||.|..|.+.++...+.+.+|...
T Consensus 127 --sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~------------ 192 (399)
T KOG0296|consen 127 --SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP------------ 192 (399)
T ss_pred --CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCC------------
Confidence 8999999999999988887677888899999988877 455999999999988777788776422
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceE
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sv 1449 (1620)
++|=.+.|+|+.+++|..||+|++||+.+|++++...+.... .-.++
T Consensus 193 ----------------------------ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~-----~~~~~ 239 (399)
T KOG0296|consen 193 ----------------------------CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGL-----ELPCI 239 (399)
T ss_pred ----------------------------cccccccCCCceEEEEecCceEEEEecCCCceeEEecccccC-----cCCcc
Confidence 566678889999999999999999999999999988754422 12222
Q ss_pred eeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE--------ccCCcEEEEE-e---CCCCEEEEEeCCC
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--------AHDGYVTKLA-A---PEDHLLVSSSLDK 1517 (1620)
Q Consensus 1450 a~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~--------gH~~~V~sva-s---pdg~~LaSgS~Dg 1517 (1620)
. ....+..+.+|+.++.+++-...+|+.+.... .+...+.+|. . ..=.+.|+|+.||
T Consensus 240 ~-----------~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 240 S-----------LNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG 308 (399)
T ss_pred c-----------cccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc
Confidence 2 23456789999999999999999999888776 4666667776 2 3345889999999
Q ss_pred cEEEEECCCCCCCCCeEeecCCCCEEEEeecC-CEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccE
Q 000355 1518 TLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVL 1595 (1620)
Q Consensus 1518 tI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V 1595 (1620)
+|.|||+.... +...-.|..+|..+-..+ .+|++++.|+ |+.||.+ .|+....+. +|...|
T Consensus 309 ~i~iyD~a~~~---~R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaR-----tG~l~~~y~---------GH~~~I 371 (399)
T KOG0296|consen 309 TIAIYDLAAST---LRHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDAR-----TGQLKFTYT---------GHQMGI 371 (399)
T ss_pred eEEEEecccch---hheeccCCCceEEEEEcCcchheeeccCceEEeeecc-----ccceEEEEe---------cCchhe
Confidence 99999998853 234456888999755555 8899999999 9999965 566533222 599999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1596 SSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1596 ~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+++++|+.++++|+|+|++.+||+
T Consensus 372 l~f~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 372 LDFALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred eEEEEcCCCcEEEEecCCCeEEEEe
Confidence 9999999999999999999999985
No 65
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=8.5e-32 Score=299.62 Aligned_cols=289 Identities=19% Similarity=0.302 Sum_probs=251.2
Q ss_pred EEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe
Q 000355 1254 PWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1333 (1620)
Q Consensus 1254 lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~ 1333 (1620)
.|=..-...+.+.||..+|+.+-|+|+...+++++. |++|++||..||++...++||++.|.+|+|+..|..+++|
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~----d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tc 168 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASE----DATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATC 168 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecC----CceEEEEEccchhhhhhhhccccceeEEEEecCccEEEec
Confidence 354445678889999999999999999999999998 8999999999999999999999999999999999999776
Q ss_pred --CCcEEEEeCCC-CceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEE
Q 000355 1334 --DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1410 (1620)
Q Consensus 1334 --DgtV~IWD~~t-g~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~l 1410 (1620)
|-.+++||..+ -+|++.+.+|. ..|.++.+.|.|+++
T Consensus 169 SsDl~~~LWd~~~~~~c~ks~~gh~----------------------------------------h~vS~V~f~P~gd~i 208 (406)
T KOG0295|consen 169 SSDLSAKLWDFDTFFRCIKSLIGHE----------------------------------------HGVSSVFFLPLGDHI 208 (406)
T ss_pred CCccchhheeHHHHHHHHHHhcCcc----------------------------------------cceeeEEEEecCCee
Confidence 87899999875 45555555442 236777888889999
Q ss_pred EEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEE
Q 000355 1411 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490 (1620)
Q Consensus 1411 asgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~ 1490 (1620)
++++.|.+|+.||+.+|-+++++.+|. .+|+.+... .||.++|+++.|.+|++|-+.++++..
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~~h~------ewvr~v~v~-----------~DGti~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFPGHS------EWVRMVRVN-----------QDGTIIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred eecccccceeEEecccceeEEeccCch------HhEEEEEec-----------CCeeEEEecCCCceEEEEEeccchhhh
Confidence 999999999999999999999999754 468888764 567899999999999999999999999
Q ss_pred EEEccCCcEEEEE-eCC---------------CCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEE
Q 000355 1491 SWRAHDGYVTKLA-APE---------------DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDV 1552 (1620)
Q Consensus 1491 ~l~gH~~~V~sva-spd---------------g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~L 1552 (1620)
.++.|..+|-+++ .|. +++++++|.|++|++||+.++ .++.++.||.++|. +|+|.|++|
T Consensus 272 ~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 272 ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEE
Confidence 9999999999888 331 259999999999999999999 88999999999999 499999999
Q ss_pred EEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1553 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1553 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
+|+.+|+ +++||+. .+++. +.+. .|...|++++|+-+..+++||+-|.++++|
T Consensus 350 ~ScaDDktlrvwdl~-----~~~cm----k~~~-----ah~hfvt~lDfh~~~p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLK-----NLQCM----KTLE-----AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 403 (406)
T ss_pred EEEecCCcEEEEEec-----cceee----eccC-----CCcceeEEEecCCCCceEEeccccceeeee
Confidence 9999999 9999986 33331 2222 477889999999999999999999999999
No 66
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.98 E-value=2e-31 Score=297.91 Aligned_cols=331 Identities=18% Similarity=0.265 Sum_probs=254.9
Q ss_pred ccccCCCcccccccccccchhhhhhcccccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCCCceeEEeecccCc
Q 000355 1192 SRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGA 1271 (1620)
Q Consensus 1192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~l~tl~gH~~~ 1271 (1620)
.....+.|..+.+.++|+....-........-|.|||.++-..+.| |.||++||++++||.+|++..++.||+++
T Consensus 72 e~l~~kgiSsE~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~-----IltgsYDg~~riWd~~Gk~~~~~~Ght~~ 146 (423)
T KOG0313|consen 72 EHLEEKGISSEEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKW-----ILTGSYDGTSRIWDLKGKSIKTIVGHTGP 146 (423)
T ss_pred HHHHHcCcChhheeEEEEEEecCCCCccccccchhhhhhhcccCce-----EEEeecCCeeEEEecCCceEEEEecCCcc
Confidence 3344566777888888888766666666777899999986555777 99999999999999999999999999999
Q ss_pred EEEEEEccCCC---EEEEeccCCCCCcEEEEEeCCCCeE----EEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeC
Q 000355 1272 LRSVAVGQDEC---TVFTAGIGPGFKGTVQKWELTRINC----VSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1342 (1620)
Q Consensus 1272 V~svafspdg~---~LaSgs~d~~~DgtVrLWdl~tg~~----l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~ 1342 (1620)
|.+++|.-.+. .+++||. |.++++|..+.++. ++.-+||...|.+|+..+++.++ +|.|.+++||+.
T Consensus 147 ik~v~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~ 222 (423)
T KOG0313|consen 147 IKSVAWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSV 222 (423)
T ss_pred eeeeEEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeeccc
Confidence 99999865443 5999998 89999999877643 33445999999999999999998 566999999993
Q ss_pred CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEE
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1422 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlw 1422 (1620)
.+ .....+...... .......-.....+..+....+|...|.++.|.. ...+.+++.|.+|+.|
T Consensus 223 ~~-~~~~~~E~~s~~----rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-----------~~v~yS~SwDHTIk~W 286 (423)
T KOG0313|consen 223 ET-DEEDELESSSNR----RRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-----------ATVIYSVSWDHTIKVW 286 (423)
T ss_pred CC-Cccccccccchh----hhhhhhhhhcccccCceEEecccccceeeEEEcC-----------CCceEeecccceEEEE
Confidence 32 222222211100 0000000111223344555566777777666654 5688999999999999
Q ss_pred ECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc---EEEEEEccCCcE
Q 000355 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---VIASWRAHDGYV 1499 (1620)
Q Consensus 1423 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~---~i~~l~gH~~~V 1499 (1620)
|+.+|.++.++.+.. ..++|... +..++||+|+.|..+++||.|++. ...++.||.+.|
T Consensus 287 Dletg~~~~~~~~~k-------sl~~i~~~-----------~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwV 348 (423)
T KOG0313|consen 287 DLETGGLKSTLTTNK-------SLNCISYS-----------PLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWV 348 (423)
T ss_pred EeecccceeeeecCc-------ceeEeecc-----------cccceeeecCCCCceeecCCCCCCCceeEEeeecchhhh
Confidence 999999887776532 25566654 445799999999999999999864 457788999999
Q ss_pred EEEE-eCCC-CEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeec-CCEEEEEeCCc-eEEEecc
Q 000355 1500 TKLA-APED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW-GQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1500 ~sva-spdg-~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpd-g~~LaSgs~D~-I~vwdl~ 1566 (1620)
.+|. +|.. ..|+|||.|+++++||+|+.+ ..++.+.+|.+.|.+..+. +..++||+.|+ |+++.-+
T Consensus 349 ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k-~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 349 SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK-APLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred hheecCCCCceEEEEEecCCeEEEEEeccCC-CcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 9999 7754 588999999999999999974 4789999999999998876 45899999999 9998754
No 67
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.98 E-value=7.2e-32 Score=322.39 Aligned_cols=140 Identities=21% Similarity=0.253 Sum_probs=121.8
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||.||+|++. .+++.||+|.+....... .....+. +|+.+|+.++||||+++++++...+
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKR------DTQRIYALKTIRKAHIVSRSEVTHTL--------AERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCcEeceeeEEecCC
Confidence 799999999999962 457889999987532222 2223333 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCccc
Q 000355 191 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~ 269 (1620)
.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~ 142 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKL 142 (312)
T ss_pred eEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECccccc
Confidence 99999999995 9999997 356789999999999999999999999999999999999999999 899999999983
No 68
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.98 E-value=9.6e-32 Score=324.28 Aligned_cols=148 Identities=19% Similarity=0.227 Sum_probs=129.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++++.||+|+||.||+|++. .+++.||+|++........ ....+. +|++++..++||||+++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~iv~~ 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKK------DTGEIVALKRMKKSLLFKLNEVRHVL--------TERDILTTTKSEWLVKL 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhCCCCCCccE
Confidence 36999999999999999999962 3578999999976432221 222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL 142 (333)
T cd05600 67 LYAFQDDEYLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKL 142 (333)
T ss_pred EEEEEcCCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9999997 456789999999999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~Dfg~a~~ 150 (333)
T cd05600 143 TDFGLSKG 150 (333)
T ss_pred EeCcCCcc
Confidence 99999984
No 69
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.98 E-value=1e-31 Score=329.23 Aligned_cols=147 Identities=27% Similarity=0.362 Sum_probs=128.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||+|+||.||+|.+. .+++.||+|++..........+++. +|+.+|+.++||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP------RDGKRVALKKMPNVFQNLVSCKRVF--------RELKMLCFFKHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC------CCCCEEEEEeccccccchHHHHHHH--------HHHHHHHhCCCCCcCCHhh
Confidence 4788999999999999999862 4678999999865322222333444 8999999999999999999
Q ss_pred EEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 185 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 185 ~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++...+ .+|+||||++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~ 142 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VL 142 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CE
Confidence 998876 899999999999999887 456789999999999999999999999999999999999999999 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||+++.
T Consensus 143 kL~Dfg~a~~ 152 (372)
T cd07853 143 KICDFGLARV 152 (372)
T ss_pred Eeccccceee
Confidence 9999999973
No 70
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=313.52 Aligned_cols=154 Identities=14% Similarity=0.157 Sum_probs=134.1
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
..+..-|.+.+.||+|-|++|-+|++- -+|+.||||++.+.+...-.....+ .|++.|+.++||||
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHV------FTGekVAVKviDKTKlD~~st~hlf--------qEVRCMKLVQHpNi 79 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHV------FTGEKVAVKVIDKTKLDTLSTGHLF--------QEVRCMKLVQHPNI 79 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhh------cccceeEEEEecccccchhhhhHHH--------HHHHHHHHhcCcCe
Confidence 345667999999999999999998874 4689999999998776654444444 89999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
|+||++..+...+|||+|+-+| ||+++|-.. ...+.|..++.|++||+.|+.|||+..||||||||+|+.+-+.. +-
T Consensus 80 VRLYEViDTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-Gl 157 (864)
T KOG4717|consen 80 VRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-GL 157 (864)
T ss_pred eeeeehhcccceEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-Cc
Confidence 9999999999999999999985 999999853 55679999999999999999999999999999999998775543 28
Q ss_pred EEEeecCCccc
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 lKL~DFGla~~ 269 (1620)
+||+|||++-.
T Consensus 158 VKLTDFGFSNk 168 (864)
T KOG4717|consen 158 VKLTDFGFSNK 168 (864)
T ss_pred eEeeecccccc
Confidence 99999999873
No 71
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.98 E-value=1.4e-31 Score=322.19 Aligned_cols=142 Identities=22% Similarity=0.187 Sum_probs=123.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|++.+..... .....+. +|+++|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREK------ASGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCcceEEEEEc
Confidence 46999999999999862 467899999997643222 2223333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++.+|+||||+++ +|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~ 142 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLC 142 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCC
Confidence 9999999999985 9988887 456789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 143 ~~ 144 (328)
T cd05593 143 KE 144 (328)
T ss_pred cc
Confidence 73
No 72
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=8.8e-34 Score=302.46 Aligned_cols=154 Identities=19% Similarity=0.201 Sum_probs=131.0
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.......|+...+||+|.||+||+|+.. .+++.||+|++...... ..+++++++|+++|+.|+|+|
T Consensus 12 ~~~~~~~yek~~kigqGtfgeVFkAr~~------n~~kkvalkkvlmeneK--------eGfpitalreikiL~~lkHen 77 (376)
T KOG0669|consen 12 FCDEVSKYEKLAKIGQGTFGEVFKARSK------NTGKKVALKKVLMENEK--------EGFPITALREIKILQLLKHEN 77 (376)
T ss_pred ceecchHHHHHHhcCCchHHHHHHHhhc------CccchhHHHHHHHhccc--------cCCcHHHHHHHHHHHHhcchh
Confidence 3445678999999999999999999862 35677898876542211 124556789999999999999
Q ss_pred ccceeeEEEeC--------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceE
Q 000355 179 VAPVLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250 (1620)
Q Consensus 179 Iv~l~~~~~~~--------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 250 (1620)
++.+++++.+. ..+|+||.+|+.||..++. .+...++..+++.++.+++.||.|+|++.|+|||+||+|+|
T Consensus 78 v~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvL 156 (376)
T KOG0669|consen 78 VVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVL 156 (376)
T ss_pred HHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEE
Confidence 99999987643 2699999999999999997 35578999999999999999999999999999999999999
Q ss_pred ecCCCceEEEEeecCCccc
Q 000355 251 LTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 251 l~~~~~~~lKL~DFGla~~ 269 (1620)
|+.+| .+||+|||+||.
T Consensus 157 It~dg--ilklADFGlar~ 173 (376)
T KOG0669|consen 157 ITKDG--ILKLADFGLARA 173 (376)
T ss_pred EcCCc--eEEeeccccccc
Confidence 99999 999999999984
No 73
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=2.2e-33 Score=315.11 Aligned_cols=205 Identities=18% Similarity=0.243 Sum_probs=176.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||+|-+|++. ..|+.||||.|++.++..+...-.++ |||+||..|+||||+++
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~------~sgR~VAiKsIrKdkIkdeqDlvhIR-------REIeIMSsLNHPhII~I 118 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEH------KSGREVAIKSIRKDKIKDEQDLVHIR-------REIEIMSSLNHPHIIQI 118 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhc------cCCcEeehhhhhhhhcccHHHHHHHH-------HHHHHHhhcCCCceeeh
Confidence 458999999999999999998863 35799999999998776654433333 99999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|++|+..+.+.|||||.. |+|+++|. ..+.+++.+++.+++||.+|+.|||.++|+|||||.+|||+|.++ ++||
T Consensus 119 yEVFENkdKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiKI 194 (668)
T KOG0611|consen 119 YEVFENKDKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIKI 194 (668)
T ss_pred hhhhcCCceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Ceee
Confidence 999999999999999998 69999998 577899999999999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccc-ccccccccccchHHHHhhhhcccCCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~-~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+|||++-..... ....++|| +|.|.+||++.+.+|.. .+|-|+.|.+. |..+-+-.+|.||.+
T Consensus 195 ADFGLSNly~~~-----------kfLqTFCG-SPLYASPEIvNG~PY~GPEVDsWsLGvLL-YtLVyGtMPFDG~Dh 258 (668)
T KOG0611|consen 195 ADFGLSNLYADK-----------KFLQTFCG-SPLYASPEIVNGTPYKGPEVDSWSLGVLL-YTLVYGTMPFDGRDH 258 (668)
T ss_pred eccchhhhhccc-----------cHHHHhcC-CcccCCccccCCCCCCCCccchhhHHHHH-HHHhhcccccCCchH
Confidence 999998743211 01124454 78999999999999954 99999999876 666666777888764
No 74
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=3.2e-32 Score=318.47 Aligned_cols=172 Identities=19% Similarity=0.245 Sum_probs=143.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-ccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l~ 183 (1620)
.|++++.||+|+-++||++.. .++..+|+|++.......+...-+. +|+.+|.+|+ |.+||+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~-------s~~~iyalkkv~~~~~D~qtl~gy~--------nEI~lL~KLkg~~~IIqL~ 426 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLN-------SDKQIYALKKVVLLEADNQTLDGYR--------NEIALLNKLKGHDKIIQLY 426 (677)
T ss_pred hhhHHHhhcCCCcceeeeeec-------CCCcchhhhHHHHhhcCHHHHHHHH--------HHHHHHHHhcCCceEEEEe
Confidence 799999999999999999985 6678899999877655555555565 9999999995 89999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
||-..++.+||||||-+.||..+|+. .....+.+.+++|.+|++.|+.++|.+||||-||||.|+|+-.. .+||+|
T Consensus 427 DYEv~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG---~LKLID 502 (677)
T KOG0596|consen 427 DYEVTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKG---RLKLID 502 (677)
T ss_pred eeeccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEee---eEEeee
Confidence 99999999999999999999999984 44556678999999999999999999999999999999999875 599999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
||+|....... ... ....-.||+.||+||.+.
T Consensus 503 FGIA~aI~~DT-TsI--------~kdsQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 503 FGIANAIQPDT-TSI--------VKDSQVGTVNYMSPEALT 534 (677)
T ss_pred echhcccCccc-cce--------eeccccCcccccCHHHHh
Confidence 99999543221 111 112224799999999764
No 75
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=4.9e-31 Score=325.25 Aligned_cols=144 Identities=17% Similarity=0.104 Sum_probs=127.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|... ....+..||+|.+...+. .. +|+++|+.++||||+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~----~~~~~~~v~vK~~~~~~~-------~~--------~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKH----GDEQRKKVIVKAVTGGKT-------PG--------REIDILKTISHRAIINL 151 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEc----CCccceeEEEEecccccc-------HH--------HHHHHHHhcCCCCccce
Confidence 457999999999999999998751 124567899998865321 11 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++...+.+|+|||++.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 152 ~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~ 227 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLG 227 (392)
T ss_pred eeeEeeCCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEc
Confidence 99999999999999999999999996 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 228 DfG~a~~ 234 (392)
T PHA03207 228 DFGAACK 234 (392)
T ss_pred cCccccc
Confidence 9999974
No 76
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=1.8e-31 Score=319.30 Aligned_cols=143 Identities=21% Similarity=0.229 Sum_probs=118.4
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
.++||+|+||+||+|++. ...+++.+|+|.+...... .... +|+++|+.++||||+++++++..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~----~~~~~~~~aiK~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRK----DGKDDRDYALKQIEGTGIS----MSAC--------REIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEc----cCCCCceEEEEEECCCCCc----HHHH--------HHHHHHHhcCCCCCcceeeeEec
Confidence 468999999999999862 1245688999998653222 1222 89999999999999999999864
Q ss_pred --CCEEEEEEeCCCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec----CCC
Q 000355 189 --SGLITSVIPKTPYTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 255 (1620)
Q Consensus 189 --~~~~~lV~E~~~g~L~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~~ 255 (1620)
+..+|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~ 149 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence 45789999999999999886421 23588999999999999999999999999999999999994 445
Q ss_pred ceEEEEeecCCccc
Q 000355 256 WSWLYICDKPLVGF 269 (1620)
Q Consensus 256 ~~~lKL~DFGla~~ 269 (1620)
.+||+|||+|+.
T Consensus 150 --~~kl~DfG~a~~ 161 (317)
T cd07868 150 --RVKIADMGFARL 161 (317)
T ss_pred --cEEEeecCceec
Confidence 799999999984
No 77
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.98 E-value=2.4e-31 Score=317.19 Aligned_cols=148 Identities=22% Similarity=0.286 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|++.+.||+|+||.||+|++. .++..+|+|.++...... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEec------CCCCeEEEEEeeccccCC-cchhHH--------HHHHHHHhCCCCCcceE
Confidence 678999999999999999999862 356789999987543221 122233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++..++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 146 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDKDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (309)
T ss_pred EEEEeeCCeEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999999988743 44578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 147 Dfg~~~ 152 (309)
T cd07872 147 DFGLAR 152 (309)
T ss_pred ccccce
Confidence 999987
No 78
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.98 E-value=2.6e-31 Score=313.12 Aligned_cols=148 Identities=22% Similarity=0.269 Sum_probs=123.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC---Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv~ 181 (1620)
+|++.+.||+|+||+||+|++. .+++.+|+|.++............. +|+.+++.+ +||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP------HSGHFVALKSVRVQTNEDGLPLSTV--------REVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC------CCCcEEEEEEeccCcCCCCCchHHH--------HHHHHHHHhhhcCCCCeee
Confidence 5899999999999999999962 4678999999876432221112222 666666655 7999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++... ..+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~- 145 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG- 145 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-
Confidence 99998653 468999999999999999865555689999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 146 -~~kl~dfg~~~ 156 (288)
T cd07863 146 -QVKLADFGLAR 156 (288)
T ss_pred -CEEECccCccc
Confidence 89999999987
No 79
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=3.3e-31 Score=323.03 Aligned_cols=187 Identities=19% Similarity=0.260 Sum_probs=145.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDT------VLGINVAVKKLSRPFQNQTHAKRAY--------RELVLLKCVNHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEc------CCCceeEEEEecccccchhHHHHHH--------HHHHHHHhCCCCCEee
Confidence 4689999999999999999999862 4578999999976433333333444 8999999999999999
Q ss_pred eeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
+++++...+ .+|+||||++++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 999987553 579999999999888875 2478889999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 320 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~i 320 (1620)
.+||+|||+++...... ......+|+.|+|||++.+..|+.++|+|+.|++
T Consensus 161 --~~kl~Dfg~a~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i 211 (359)
T cd07876 161 --TLKILDFGLARTACTNF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 211 (359)
T ss_pred --CEEEecCCCccccccCc------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHH
Confidence 89999999997421100 0011225666777776655555555555555543
No 80
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=1.9e-31 Score=320.37 Aligned_cols=141 Identities=20% Similarity=0.203 Sum_probs=122.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||++++. .++..||+|.+....... .....+. +|+++++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCcceeeEEec
Confidence 46999999999999862 467899999987632222 1222333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~ 142 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHh
Confidence 9999999999985 9988887 456789999999999999999999999999999999999999998 8999999998
Q ss_pred c
Q 000355 268 G 268 (1620)
Q Consensus 268 ~ 268 (1620)
+
T Consensus 143 ~ 143 (323)
T cd05595 143 K 143 (323)
T ss_pred c
Confidence 7
No 81
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=2.1e-31 Score=319.63 Aligned_cols=142 Identities=19% Similarity=0.169 Sum_probs=121.0
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.||+|++.+..... .....+. +|+.++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLK------ESGRLYAVKVLKKDVILQDDDVECTM--------TEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhccHHHHHH--------HHHHHHHhccCCCchhceeeEEE
Confidence 46999999999999862 457899999987542221 1222333 788888776 6999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~ 142 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGM 142 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCC
Confidence 99999999999995 9999887 356789999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 ~~~ 145 (320)
T cd05590 143 CKE 145 (320)
T ss_pred Cee
Confidence 873
No 82
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=8.1e-31 Score=285.85 Aligned_cols=280 Identities=18% Similarity=0.296 Sum_probs=239.1
Q ss_pred hhhcccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCce--eEEeecccCcEEEEEEccCCCEEEEecc
Q 000355 1214 RQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASI--LSSIRAHHGALRSVAVGQDECTVFTAGI 1289 (1620)
Q Consensus 1214 ~~~~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~--l~tl~gH~~~V~svafspdg~~LaSgs~ 1289 (1620)
...+...+.||++.|+. |+|+|.+ +||||.|..|.+|+..|.+ ..+++||+++|..+.|..|+..|+|+|.
T Consensus 36 l~ap~m~l~gh~geI~~~~F~P~gs~-----~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 36 LQAPIMLLPGHKGEIYTIKFHPDGSC-----FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred ccchhhhcCCCcceEEEEEECCCCCe-----EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC
Confidence 34567788999999996 9999997 9999999999999988654 5678899999999999999999999998
Q ss_pred CCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE---EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCC
Q 000355 1290 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1366 (1620)
Q Consensus 1290 d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l---aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1366 (1620)
|++|+.||+++|++++.+++|.+-|++++-..-|..+ +|.|||+++||+++..+++++...
T Consensus 111 ----Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k------------ 174 (338)
T KOG0265|consen 111 ----DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK------------ 174 (338)
T ss_pred ----CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc------------
Confidence 9999999999999999999999999999854445555 445999999999999988877532
Q ss_pred CcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCcc
Q 000355 1367 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1446 (1620)
Q Consensus 1367 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V 1446 (1620)
..++++.|..++..+.+|+-|+.|++||++.+..++++.||... |
T Consensus 175 -----------------------------yqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~Dt------I 219 (338)
T KOG0265|consen 175 -----------------------------YQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADT------I 219 (338)
T ss_pred -----------------------------eeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCc------e
Confidence 12456666667999999999999999999999999999987654 6
Q ss_pred ceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCC----CcEEEEEEccC--CcEEEE--E-eCCCCEEEEEeCCC
Q 000355 1447 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS----GNVIASWRAHD--GYVTKL--A-APEDHLLVSSSLDK 1517 (1620)
Q Consensus 1447 ~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~t----g~~i~~l~gH~--~~V~sv--a-spdg~~LaSgS~Dg 1517 (1620)
+.+..+ ++|.++.+-+-|.++++||++- ..++..+.+|. -..+.+ + +|+++.+.+||.|+
T Consensus 220 t~lsls-----------~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr 288 (338)
T KOG0265|consen 220 TGLSLS-----------RYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADR 288 (338)
T ss_pred eeEEec-----------cCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccc
Confidence 777665 6678999999999999999984 34578887764 334444 3 89999999999999
Q ss_pred cEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEE
Q 000355 1518 TLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGL 1562 (1620)
Q Consensus 1518 tI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~v 1562 (1620)
.+++||.... ..++.+.||.+.|++ |+|....+.+++.|+ |.+
T Consensus 289 ~vyvwd~~~r--~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 289 FVYVWDTTSR--RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred eEEEeecccc--cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 9999999876 677899999999995 999999999999998 765
No 83
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=3.6e-31 Score=318.10 Aligned_cols=144 Identities=19% Similarity=0.209 Sum_probs=121.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHH---hhccCCcccccc
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESS---VPGCLRHPNVAP 181 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~---iL~~l~HpNIv~ 181 (1620)
|++++.||+|+||.||+|.+. .+++.||||++++...... ....+. +|++ +++.++||||++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~l~--------~e~~~~~~~~~l~hp~i~~ 66 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK------KTGELYAIKALKKGDIIARDEVESLM--------CEKRIFETANSERHPFLVN 66 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccccCCCChhc
Confidence 678999999999999999862 4578999999976432222 122222 4554 456778999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++.+.+.+|+||||++| +|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~k 141 (324)
T cd05589 67 LFACFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVK 141 (324)
T ss_pred eeeEEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEE
Confidence 99999999999999999995 8888876 35689999999999999999999999999999999999999999 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 142 L~Dfg~~~ 149 (324)
T cd05589 142 IADFGLCK 149 (324)
T ss_pred eCcccCCc
Confidence 99999987
No 84
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.3e-33 Score=317.93 Aligned_cols=172 Identities=16% Similarity=0.196 Sum_probs=145.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
...|..++.||+|+||.||+|.+. .+++.||+|++....... ...+.. +|+.+|..+++|||.++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~------~t~k~vAiKii~Le~~~d-eIediq--------qei~~Ls~~~~~~it~y 76 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDN------KTKKVVAIKIIDLEEAED-EIEDIQ--------QEISVLSQCDSPNITEY 76 (467)
T ss_pred ccccccchhccccccceeeeeeec------cccceEEEEEechhhcch-hhHHHH--------HHHHHHHhcCcchHHhh
Confidence 346888899999999999999983 467999999998754332 233333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|+.|..+..++++||||.| ++.+.++ ....+.+.++..++++++.||.|||.++.+|||||+.|||+..+| .+||
T Consensus 77 ygsyl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl 152 (467)
T KOG0201|consen 77 YGSYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKL 152 (467)
T ss_pred hhheeecccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEE
Confidence 9999999999999999995 9999998 556668999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
+|||++.+....... .....|||+|||||++.
T Consensus 153 ~DfgVa~ql~~~~~r-----------r~tfvGTPfwMAPEVI~ 184 (467)
T KOG0201|consen 153 ADFGVAGQLTNTVKR-----------RKTFVGTPFWMAPEVIK 184 (467)
T ss_pred Eecceeeeeechhhc-----------cccccccccccchhhhc
Confidence 999999854332211 12345899999999974
No 85
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=2.8e-31 Score=324.79 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=139.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|.+.+............. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~il~~~~h~~iv~~ 108 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK------SSKQVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAHANSEWIVQL 108 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCcceE
Confidence 568999999999999999999862 45789999999753322222222222 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+++.+|+||||++ |+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL 183 (370)
T cd05596 109 HYAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (370)
T ss_pred EEEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEE
Confidence 999999999999999998 599999873 3578999999999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+|||+++........ ......||+.|||||++
T Consensus 184 ~DfG~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 215 (370)
T cd05596 184 ADFGTCMKMDANGMV----------RCDTAVGTPDYISPEVL 215 (370)
T ss_pred EeccceeeccCCCcc----------cCCCCCCCcCeECHHHh
Confidence 999999843211000 01112367778888765
No 86
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2.8e-31 Score=320.04 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
+|++++.||+|+||.||++++... ..+++.+|+|++.+..... .....+. +|+++++.+ +||||++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~i~~ 69 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTG---HDTGKLYAMKVLQKAALVQKAKTVEHTR--------TERNVLEHVRQSPFLVT 69 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEccc---CCCCCEEEEEEEEHHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccc
Confidence 589999999999999999986321 2468899999987532211 1112222 899999999 4899999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++.+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~k 145 (332)
T cd05614 70 LHYAFQTEAKLHLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVV 145 (332)
T ss_pred EEEEEecCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEE
Confidence 99999999999999999995 9999987 356689999999999999999999999999999999999999998 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||+++.
T Consensus 146 l~DfG~~~~ 154 (332)
T cd05614 146 LTDFGLSKE 154 (332)
T ss_pred EeeCcCCcc
Confidence 999999984
No 87
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=2.7e-31 Score=319.10 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=123.5
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
++.||+|+||.||+|++... ...++.+|+|.+....... .....+. +|+.+|+.++||||++++++|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~---~~~~~~~avK~~~~~~~~~~~~~~~~~~--------~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTG---ADTGKIFAMKVLKKATIVRNQKDTAHTK--------AERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred CceeeecCCeEEEEEEEccc---CCCCCEEEEEEEEHHHHHhhhhhHHHHH--------HHHHHHHhCCCCchhceeeEE
Confidence 36899999999999986321 2467899999987532211 1112222 899999999999999999999
Q ss_pred EeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 187 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 187 ~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
..++.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg 145 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFG 145 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCc
Confidence 999999999999995 9999997 456788999999999999999999999999999999999999998 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
+++
T Consensus 146 ~~~ 148 (323)
T cd05584 146 LCK 148 (323)
T ss_pred CCe
Confidence 987
No 88
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=2e-31 Score=320.41 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=122.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|.+. .+++.+|+|.+........ ....+. +|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~--------~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEK------ATGRYYAMKILKKEVIVAKDEVAHTL--------TENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCCceEEEEEc
Confidence 46999999999999862 4678999999976432221 222333 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
++.+|+||||+++ +|.+++. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~ 142 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGL 142 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCC
Confidence 9999999999995 9988887 45678999999999999999999997 8999999999999999999 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 ~~~ 145 (325)
T cd05594 143 CKE 145 (325)
T ss_pred Cee
Confidence 873
No 89
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=2.8e-31 Score=321.57 Aligned_cols=151 Identities=25% Similarity=0.289 Sum_probs=128.5
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
+...++|++++.||+|+||.||+|.+. .++..||+|++............+. +|+++|+.++||||
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i 76 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDT------RLRQKVAVKKLSRPFQSLIHARRTY--------RELRLLKHMKHENV 76 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEEC------CCCCEEEEEEeCchhhhhHHHHHHH--------HHHHHHHhcCCCch
Confidence 345679999999999999999999862 4578899999875432222233333 89999999999999
Q ss_pred cceeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 180 APVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 180 v~l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
+++++++... ...|++||+++++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 77 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~ 153 (343)
T cd07878 77 IGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 153 (343)
T ss_pred hhhhhhhcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC
Confidence 9999988643 3579999999889998886 346899999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCccc
Q 000355 254 SCWSWLYICDKPLVGF 269 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~ 269 (1620)
++ .+||+|||+++.
T Consensus 154 ~~--~~kl~Dfg~~~~ 167 (343)
T cd07878 154 DC--ELRILDFGLARQ 167 (343)
T ss_pred CC--CEEEcCCcccee
Confidence 98 899999999883
No 90
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=8.9e-31 Score=319.85 Aligned_cols=187 Identities=20% Similarity=0.254 Sum_probs=146.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. ..++.+|||++............+. +|+.+++.++||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDA------ILERNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEEC------CCCcEEEEEEeCccccCchhHHHHH--------HHHHHHHhcCCCCccc
Confidence 4679999999999999999999872 3568899999876433333333344 8999999999999999
Q ss_pred eeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
+++++... ..+|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence 99988654 36899999999999988862 367888999999999999999999999999999999999998
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 320 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~i 320 (1620)
.+||+|||+++...... ......+|+.|+|||++.+..|+.++|+|+.|++
T Consensus 164 --~~kL~DfG~a~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i 214 (364)
T cd07875 164 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 214 (364)
T ss_pred --cEEEEeCCCccccCCCC------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHH
Confidence 89999999998432100 0112235677888877666555555566655544
No 91
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=6.5e-31 Score=315.82 Aligned_cols=146 Identities=17% Similarity=0.130 Sum_probs=125.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCc-ccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRH-PNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~H-pNIv~l 182 (1620)
+|++++.||+|+||.||+|++. .+++.||+|++.+..... .....+. .|++++..++| ++|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVIIQDDDVECTM--------VEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhcCCCCceeee
Confidence 5889999999999999999862 356889999987643222 2223333 89999999976 468899
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL 142 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKI 142 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEE
Confidence 999999999999999998 59999987 355689999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 143 ~Dfg~~~ 149 (324)
T cd05587 143 ADFGMCK 149 (324)
T ss_pred eecCcce
Confidence 9999987
No 92
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=5.9e-31 Score=320.30 Aligned_cols=185 Identities=20% Similarity=0.261 Sum_probs=142.2
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. ..++.+|+|.+............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEec------CCCceEEEEEeCCcccChHHHHHHH--------HHHHHHHHhCCCchhc
Confidence 4679999999999999999999862 3578899999876433333333444 8999999999999999
Q ss_pred eeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
+++++.... .+|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 999986543 5799999999999888762 478889999999999999999999999999999999999998
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
.+||+|||+++...... ......+|+.|+|||++.+..|+.++|+|+.|
T Consensus 157 --~~kl~Dfg~~~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG 205 (355)
T cd07874 157 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205 (355)
T ss_pred --CEEEeeCcccccCCCcc------------ccCCccccCCccCHHHHcCCCCCchhhHHHHH
Confidence 89999999998421100 01112356667777665444344444444444
No 93
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=9.4e-31 Score=315.44 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=139.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||++++. .+++.||+|++.+.........+.++ +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK------NTGQVYAMKILNKWEMLKRAETACFR-------EERDVLVNGDRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCCCceE
Confidence 47999999999999999999862 45789999998753222222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|.+++++|+||||++ |+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 144 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLA 144 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEE
Confidence 99999999999999998 599999973 245689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
|||+++........ ....+.||+.|||||++
T Consensus 145 Dfg~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 175 (331)
T cd05597 145 DFGSCLRLLADGTV----------QSNVAVGTPDYISPEIL 175 (331)
T ss_pred ECCceeecCCCCCc----------cccceeccccccCHHHH
Confidence 99998743211100 01122367778888775
No 94
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=2.4e-30 Score=326.36 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=135.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC------c
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR------H 176 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~------H 176 (1620)
.++|++++.||+|+||+||+|.+. ..++.||||+++..... ..+.. +|+++++.++ |
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~------~~~~~vAvK~i~~~~~~---~~~~~--------~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDR------KRKEYCAVKIVRNVPKY---TRDAK--------IEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEc------CCCeEEEEEEEecchhh---HHHHH--------HHHHHHHHHhhcCcccC
Confidence 468999999999999999999862 35788999998642111 11222 4565555554 4
Q ss_pred ccccceeeEEEeC-CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCC
Q 000355 177 PNVAPVLGLLKTS-GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 177 pNIv~l~~~~~~~-~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~ 254 (1620)
++|++++++|..+ .++|+|||+++++|.+++. +.+.+++..++.|+.||+.||.|||+ .|||||||||+|||++.+
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEeccCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 5689999998765 4899999999999999987 35678999999999999999999998 599999999999999876
Q ss_pred Cc--------------eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 255 CW--------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 255 ~~--------------~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
+. ..+||+|||++...... .....||+.|||||++.+..|+.++|+|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~--------------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 332 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERHS--------------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG 332 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCccc--------------cccccCCccccCcHHhhcCCCCcHHHHHHHH
Confidence 51 14999999987632100 1112367888888887554444444444444
No 95
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.97 E-value=7.5e-30 Score=271.30 Aligned_cols=264 Identities=14% Similarity=0.215 Sum_probs=218.9
Q ss_pred CEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCce--EEEEeccCCcc
Q 000355 1282 CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKL--LSVFAEQSMDS 1358 (1620)
Q Consensus 1282 ~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~--i~~l~~~~~~~ 1358 (1620)
-+|+|+| ||.|||+|.+.||.|.++++--.+.|+.+...|+.+.| +.+.-.||+||++++.. +.++.+|.
T Consensus 11 viLvsA~----YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~--- 83 (311)
T KOG0315|consen 11 VILVSAG----YDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHT--- 83 (311)
T ss_pred eEEEecc----CcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccC---
Confidence 4788887 69999999999999999999778899999999999998 56689999999998764 55665542
Q ss_pred ccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCc
Q 000355 1359 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1438 (1620)
Q Consensus 1359 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~ 1438 (1620)
.. |+.+.|..+|+.+++|++||++|+||+|...+.+.++
T Consensus 84 ---------------------------kN----------VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~---- 122 (311)
T KOG0315|consen 84 ---------------------------KN----------VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ---- 122 (311)
T ss_pred ---------------------------Cc----------eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc----
Confidence 22 5566666689999999999999999999977766665
Q ss_pred ccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE-ccCCcEEEEE-eCCCCEEEEEeCC
Q 000355 1439 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLA-APEDHLLVSSSLD 1516 (1620)
Q Consensus 1439 ~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~-gH~~~V~sva-spdg~~LaSgS~D 1516 (1620)
+.+.|++|+.. |+..-|++|..+|.|++||+++..+...+. .-..+|.+++ .|||.+|+.+...
T Consensus 123 ---~~spVn~vvlh-----------pnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 123 ---HNSPVNTVVLH-----------PNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred ---CCCCcceEEec-----------CCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCC
Confidence 56679999986 455689999999999999999887766654 3457899999 9999999999999
Q ss_pred CcEEEEECCCCC----CCCCeEeecCCCCEE-E-EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCC
Q 000355 1517 KTLRIWDLRRNW----PSQPTVFKGHTNGIS-G-FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGA 1589 (1620)
Q Consensus 1517 gtI~IWDl~~~~----~~~~~~l~gH~~~V~-a-fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~ 1589 (1620)
|+.++|++-+.. ..++..++.|.+-+. | +|||+++||++|.|+ ++||+++.. + ++.....
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~--------~---kle~~l~-- 255 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF--------F---KLELVLT-- 255 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc--------e---eeEEEee--
Confidence 999999987642 244557888988887 4 999999999999999 999998621 1 2222222
Q ss_pred CccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1590 KNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1590 ~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+|.+.+++++||.||++|+|||.|+.+|+|+
T Consensus 256 gh~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred cCCceEEeeeeccCccEEEecCCCCceeecc
Confidence 5889999999999999999999999999996
No 96
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=7.4e-31 Score=314.28 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=119.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhcc-CCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.||+|.++...... ....... .|..++.. ++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELK------GKGEYFAVKALKKDVVLIDDDVECTM--------VEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCCccCeeEEEE
Confidence 47999999999999962 467899999997642211 1122222 78888765 48999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+++.+|+||||+.| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCC
Confidence 99999999999985 9999987 356789999999999999999999999999999999999999998 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (316)
T cd05620 143 CK 144 (316)
T ss_pred Ce
Confidence 87
No 97
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=1e-30 Score=313.99 Aligned_cols=147 Identities=17% Similarity=0.130 Sum_probs=125.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccC-Ccccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l 182 (1620)
+|++++.||+|+||.||+|++. .+++.+|+|.+.+....... ..... .|..++..+ +||+|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCeEeeE
Confidence 5889999999999999999862 35689999999764322221 22223 788888777 57999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+.+.+|+||||++ |+|.+.+. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL 142 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEE
Confidence 999999999999999998 59999987 356689999999999999999999999999999999999999999 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~DfG~~~~ 150 (323)
T cd05616 143 ADFGMCKE 150 (323)
T ss_pred ccCCCcee
Confidence 99999873
No 98
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=8e-31 Score=315.78 Aligned_cols=143 Identities=20% Similarity=0.212 Sum_probs=123.0
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.||+|++++.........+.+. +|+.+++.+ +||||++++++|.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELK------KTRRIYAMKVIKKELVNDDEDIDWVQ-------TEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhccCCCCCCceEEEEEc
Confidence 46999999999999862 45789999999764333322222222 899999888 79999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~ 143 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccc
Confidence 9999999999985 9998887 356789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 144 ~~ 145 (329)
T cd05588 144 KE 145 (329)
T ss_pred cc
Confidence 73
No 99
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=6.7e-31 Score=315.29 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=120.6
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.+|+|.+........ ....+. .|.+++..+ +||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELK------GTDEVYAIKVLKKDVILQDDDVDCTM--------TEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEEC------CCCCEEEEEEEeHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999999862 4578999999876432222 222233 788888765 7999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+++.+|+||||+++ +|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~ 142 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGM 142 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeeccc
Confidence 99999999999985 9999887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (321)
T cd05591 143 CK 144 (321)
T ss_pred ce
Confidence 87
No 100
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.1e-32 Score=292.32 Aligned_cols=209 Identities=20% Similarity=0.209 Sum_probs=182.5
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.....++|++.+.||+|.||.||+|+.+ .++.+||+|++.+...........++ ||++|-..|+|||
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarek------ks~~IvalKVlfKsqi~~~~v~~qlr-------REiEIqs~L~hpn 83 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREK------KSLFIVALKVLFKSQILKTQVEHQLR-------REIEIQSHLRHPN 83 (281)
T ss_pred cccchhhccccccccCCccccEeEeeec------cCCcEEEEeeeeHHHHHHhcchhhhh-------heeEeecccCCcc
Confidence 3445789999999999999999999962 46789999999887655555555554 9999999999999
Q ss_pred ccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|+++|++|.++..+||++||.+ |+|+..++..+...+++..+..|++|++.||.|||.++||||||||+|+|++..+
T Consensus 84 ilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~-- 161 (281)
T KOG0580|consen 84 ILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG-- 161 (281)
T ss_pred HHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--
Confidence 9999999999999999999999 7999999977778899999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
.+||+|||.+..... +.+.+-| ||..|.+||+..+..++..+|.|+.|.+. ||+|.+..+|...+
T Consensus 162 ~lkiAdfGwsV~~p~------------~kR~tlc-gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~-yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 162 ELKIADFGWSVHAPS------------NKRKTLC-GTLDYLPPEMVEGRGHDKFVDLWSLGVLC-YEFLVGLPPFESQS 226 (281)
T ss_pred CeeccCCCceeecCC------------CCceeee-cccccCCHhhcCCCCccchhhHHHHHHHH-HHHHhcCCchhhhh
Confidence 899999999985321 1123334 58899999999999999999999999776 99999998886654
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=9.7e-31 Score=314.20 Aligned_cols=141 Identities=23% Similarity=0.246 Sum_probs=119.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHH-hhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+++.||+|++.+..... ....+++ +|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK------ADGKFYAVKVLQKKAILKKKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhhCCCCCCCCeeEEEE
Confidence 47999999999999972 467899999987532221 1222333 4544 568899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
..+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~ 142 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCC
Confidence 99999999999995 9999987 356789999999999999999999999999999999999999999 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (323)
T cd05575 143 CK 144 (323)
T ss_pred Cc
Confidence 87
No 102
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=1.8e-31 Score=293.18 Aligned_cols=269 Identities=15% Similarity=0.245 Sum_probs=223.1
Q ss_pred CCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC
Q 000355 1225 EPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1303 (1620)
Q Consensus 1225 ~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~ 1303 (1620)
.+.|+++-.|..- +++|+.|.+|++||.+ -.+++.|.||+++|.|+.|. .+.++|||. |.||++||+.
T Consensus 197 skgVYClQYDD~k-----iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSS----DsTvrvWDv~ 265 (499)
T KOG0281|consen 197 SKGVYCLQYDDEK-----IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSS----DSTVRVWDVN 265 (499)
T ss_pred CCceEEEEecchh-----hhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCC----CceEEEEecc
Confidence 4567776555443 9999999999999988 67999999999999999996 459999998 8999999999
Q ss_pred CCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCce---EEEEeccCCccccccCCCCCccccccccccc
Q 000355 1304 RINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL---LSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1378 (1620)
Q Consensus 1304 tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~---i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~ 1378 (1620)
||+++.++-+|.+.|..+.|+ + +++ .|.|.++.+||+.+... .+++.
T Consensus 266 tge~l~tlihHceaVLhlrf~-n-g~mvtcSkDrsiaVWdm~sps~it~rrVLv-------------------------- 317 (499)
T KOG0281|consen 266 TGEPLNTLIHHCEAVLHLRFS-N-GYMVTCSKDRSIAVWDMASPTDITLRRVLV-------------------------- 317 (499)
T ss_pred CCchhhHHhhhcceeEEEEEe-C-CEEEEecCCceeEEEeccCchHHHHHHHHh--------------------------
Confidence 999999999999999999984 3 455 44599999999875432 11222
Q ss_pred ccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccc
Q 000355 1379 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1458 (1620)
Q Consensus 1379 ~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~ 1458 (1620)
+|...|..+.|+ .++++++|+|.||++|++.|++.++++.+|... |-|+.+
T Consensus 318 ----GHrAaVNvVdfd------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRG------IAClQY------- 368 (499)
T KOG0281|consen 318 ----GHRAAVNVVDFD------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG------IACLQY------- 368 (499)
T ss_pred ----hhhhheeeeccc------------cceEEEecCCceEEEEeccceeeehhhhccccc------ceehhc-------
Confidence 233445556665 459999999999999999999999999987654 444443
Q ss_pred cCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCC-------C
Q 000355 1459 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS-------Q 1531 (1620)
Q Consensus 1459 ~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~-------~ 1531 (1620)
.|+++++|++|.+|++||+..|.+++.++||+.-|+++.. |.+.++||+.||+|++||+..+... +
T Consensus 369 ------r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF-d~krIVSGaYDGkikvWdl~aaldpra~~~~~C 441 (499)
T KOG0281|consen 369 ------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLC 441 (499)
T ss_pred ------cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee-cCceeeeccccceEEEEecccccCCcccccchH
Confidence 4579999999999999999999999999999999999985 4568999999999999999886432 4
Q ss_pred CeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1532 PTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1532 ~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
+.++..|++.|..+..|...+++++.|. |-+||+...
T Consensus 442 l~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 442 LRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNG 479 (499)
T ss_pred HHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCC
Confidence 5567789999999999999999998776 999998743
No 103
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=1.3e-30 Score=312.13 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=119.5
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhcc-CCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.||+|.++....... ...... .|..++.. .+||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELK------GTNEFFAIKALKKDVVLEDDDVECTM--------VERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999999862 4578899999976432221 222222 67777664 48999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~ 142 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGM 142 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcC
Confidence 99999999999984 9999987 345789999999999999999999999999999999999999998 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 a~~ 145 (316)
T cd05592 143 CKE 145 (316)
T ss_pred CeE
Confidence 983
No 104
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=5.5e-31 Score=315.61 Aligned_cols=146 Identities=20% Similarity=0.208 Sum_probs=124.8
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
++.||+|+||.||++++.... .++..+|+|++............+. +|+++|+.++||||+++++++.+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGP---DAGQLYAMKVLKKATLKVRDRVRTK--------MERDILAEVNHPFIVKLHYAFQT 69 (318)
T ss_pred CceeeeCCCEEEEEEEEeccC---CCCCEEEEEEEEHHHhhhhhHHHHH--------HHHHHHHhCCCCCcccEEEEEEc
Confidence 367999999999999863321 4688999999976432222222233 89999999999999999999999
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++.+|+||||++ |+|.+++. +...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 70 ~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~ 145 (318)
T cd05582 70 EGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS 145 (318)
T ss_pred CCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCC
Confidence 999999999998 59999987 456789999999999999999999999999999999999999998 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 146 ~~ 147 (318)
T cd05582 146 KE 147 (318)
T ss_pred cc
Confidence 73
No 105
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.97 E-value=7e-30 Score=278.55 Aligned_cols=282 Identities=18% Similarity=0.343 Sum_probs=230.9
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC-CCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1337 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~-tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV 1337 (1620)
.+..+.||++.|+.+.|+|+|..+||||. |..|.+|++. .-+-..+++||+++|..+.|..++..+.|+ |++|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~----Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGS----DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCC----cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 34567899999999999999999999996 9999999964 334567889999999999999999999655 9999
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC-CEEEEEECC
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGN 1416 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~lasgs~D 1416 (1620)
+.||.++|++++.+++|... ++.+....-| ..+.+|+.|
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~----------------------------------------vNs~~p~rrg~~lv~SgsdD 154 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSF----------------------------------------VNSLDPSRRGPQLVCSGSDD 154 (338)
T ss_pred EEEecccceeeehhccccce----------------------------------------eeecCccccCCeEEEecCCC
Confidence 99999999999988876432 1122212223 356689999
Q ss_pred CcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccC
Q 000355 1417 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1496 (1620)
Q Consensus 1417 gtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~ 1496 (1620)
+++|+||+|+..+++++... -.+++++|. ..+.-+.+|+-|+.|++||+|.+....+++||.
T Consensus 155 ~t~kl~D~R~k~~~~t~~~k-------yqltAv~f~-----------d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~ 216 (338)
T KOG0265|consen 155 GTLKLWDIRKKEAIKTFENK-------YQLTAVGFK-----------DTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA 216 (338)
T ss_pred ceEEEEeecccchhhccccc-------eeEEEEEec-----------ccccceeeccccCceeeeccccCcceEEeeccc
Confidence 99999999999888877532 236778875 334679999999999999999999999999999
Q ss_pred CcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC--CCCeEeecCCCC--EE----EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1497 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP--SQPTVFKGHTNG--IS----GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1497 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~--~~~~~l~gH~~~--V~----afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
++|+.+. +++|.++.|-+.|.++++||++--.+ .++..+.||... .+ +|||++..+.+|+.|+ +++||..
T Consensus 217 DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~ 296 (338)
T KOG0265|consen 217 DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTT 296 (338)
T ss_pred CceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecc
Confidence 9999999 99999999999999999999987432 445677776543 22 4999999999999999 9999964
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
. ..-++.. .||.+.|..++|+|...++.+++.|.+|.+
T Consensus 297 ~-----------r~~lykl---pGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 297 S-----------RRILYKL---PGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred c-----------ccEEEEc---CCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 1 0112222 269999999999999999999999999875
No 106
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=3.3e-30 Score=285.15 Aligned_cols=282 Identities=18% Similarity=0.332 Sum_probs=237.0
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1294 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D 1294 (1620)
...+.||.+||-+ +.|...| ++|||.|++++|||++ |.+..++.||-..|+.|++|+--.+++||+. |
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~w-----f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge----d 214 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNEW-----FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE----D 214 (460)
T ss_pred hhhhhhccceEEEEeeCCCcee-----EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC----C
Confidence 4557799999997 7777888 9999999999999999 8899999999999999999999999999998 8
Q ss_pred cEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccc
Q 000355 1295 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1372 (1620)
Q Consensus 1295 gtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~ 1372 (1620)
+.|+.||++..+.++.+.||-..|.|++.+|....++++ |.++||||+++...+.++.+|...
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~--------------- 279 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNP--------------- 279 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCc---------------
Confidence 999999999999999999999999999999998888554 999999999999999999887432
Q ss_pred ccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeee
Q 000355 1373 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1452 (1620)
Q Consensus 1373 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1452 (1620)
| ..+.+.+-+..+++||.|++|++||++.|+...++..|.. .|+++|..
T Consensus 280 ---------------V----------~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkk------svral~lh 328 (460)
T KOG0285|consen 280 ---------------V----------ASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKK------SVRALCLH 328 (460)
T ss_pred ---------------c----------eeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccc------eeeEEecC
Confidence 3 3333344466899999999999999999999988876543 48888876
Q ss_pred CCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 000355 1453 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1453 ~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1532 (1620)
| .-..+|+++.| .|+-|++..|..+..+.+|..-|++++..++.++++|++.|.|..||.+++..-+.
T Consensus 329 P-----------~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~ 396 (460)
T KOG0285|consen 329 P-----------KENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQR 396 (460)
T ss_pred C-----------chhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCccccc
Confidence 4 33578888877 79999999999999999999999999955566999999999999999998743111
Q ss_pred e-Eee--c---CCCCEE--EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1533 T-VFK--G---HTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1533 ~-~l~--g---H~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
. +.. | ...+|. ||.-.|..|+||..|+ |.+|.-+
T Consensus 397 ~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 397 GQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 1 111 1 112344 4777899999999999 9999843
No 107
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.4e-30 Score=310.54 Aligned_cols=184 Identities=17% Similarity=0.192 Sum_probs=144.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||++++. .++..+|+|.+.... .......+. +|+++|++++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCCCCeE
Confidence 468999999999999999999972 457889999987532 222223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++++..++.+++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEE
Confidence 9999999999999999995 99999983 45688999999999999999999986 699999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
|+|||+++...... .....||+.|+|||++.+..++.++|+|+.|
T Consensus 145 l~Dfg~~~~~~~~~-------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG 189 (331)
T cd06649 145 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 189 (331)
T ss_pred EccCcccccccccc-------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHH
Confidence 99999987331100 0112256667777765444444444444444
No 108
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.7e-30 Score=314.67 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=152.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|++. .++..||+|...... ..+|+.+++.++||||+++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~valK~~~~~~----------------~~~E~~~l~~l~h~~iv~~ 122 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKP------GQPDPVVLKIGQKGT----------------TLIEAMLLQNVNHPSVIRM 122 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEEC------CCCceEEEEeCCccc----------------cHHHHHHHHhCCCCCCcCh
Confidence 347999999999999999999962 346789999754321 1279999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++...+..++||||+.++|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 123 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~ 199 (357)
T PHA03209 123 KDTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIG 199 (357)
T ss_pred hheEEeCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999999999999874 345689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||+++...... ......||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 200 DfG~a~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl 246 (357)
T PHA03209 200 DLGAAQFPVVAP------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVL 246 (357)
T ss_pred cCccccccccCc------------ccccccccccccCCeecCCCCCCchhhHHHHHHHH
Confidence 999997422110 01123478889999998888888888999888665
No 109
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=8.9e-30 Score=304.45 Aligned_cols=368 Identities=17% Similarity=0.240 Sum_probs=272.4
Q ss_pred cccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC--CceeEEeecccCcEEEEEEccCCCEEEEeccCCC
Q 000355 1217 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1292 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~--g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1292 (1620)
-...+.||.+-|++ |.|+-.. .+|++|+.|+++++||+. ..++.++++|.+.|++++|++|+..++++|.
T Consensus 139 ~th~fkG~gGvVssl~F~~~~~~---~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~R--- 212 (775)
T KOG0319|consen 139 CTHSFKGHGGVVSSLLFHPHWNR---WLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGR--- 212 (775)
T ss_pred EEEEecCCCceEEEEEeCCccch---hheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEecc---
Confidence 46778999999997 7766543 459999999999999988 4479999999999999999999999999998
Q ss_pred CCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeC-----CCeE--EEeCCcEEEEeCCCCceEEEEeccCC---------
Q 000355 1293 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSS-----SGRI--ASCDGTLHVWNSQTGKLLSVFAEQSM--------- 1356 (1620)
Q Consensus 1293 ~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~-----~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~--------- 1356 (1620)
|+.+.|||+.+.++.++++ --..+.++.+.++ +.++ ++.+|.+++||.++++++........
T Consensus 213 -Dkvi~vwd~~~~~~l~~lp-~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~ 290 (775)
T KOG0319|consen 213 -DKVIIVWDLVQYKKLKTLP-LYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAI 290 (775)
T ss_pred -CcEEEEeehhhhhhhheec-hhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceec
Confidence 8999999998877777765 3456677777666 4455 66699999999887765432211100
Q ss_pred ----------------------------------------------ccccccCCCCCcccccccccccccccCCCCCeEE
Q 000355 1357 ----------------------------------------------DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILS 1390 (1620)
Q Consensus 1357 ----------------------------------------------~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~s 1390 (1620)
.....++.++.............-..+|+..|.+
T Consensus 291 ~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlS 370 (775)
T KOG0319|consen 291 ESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLS 370 (775)
T ss_pred cccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheee
Confidence 0000000000000000000000111234444444
Q ss_pred Ee-e-----------------------------------cCCceEEEEEecCC-CEEEEEECCCcEEEEECCCCcee---
Q 000355 1391 TA-F-----------------------------------DGNLYTCLHHIECV-ERLVVGIGNGSLRFIDINQGQKL--- 1430 (1620)
Q Consensus 1391 v~-f-----------------------------------~~~~vt~v~~s~dg-~~lasgs~DgtVrlwDl~tg~~l--- 1430 (1620)
+. + +.+.+.+++.+..+ ..++++|.|+++++|++...+..
T Consensus 371 L~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~ 450 (775)
T KOG0319|consen 371 LDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFP 450 (775)
T ss_pred eeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccccc
Confidence 33 1 11224555554433 57889999999999999763221
Q ss_pred EEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCE
Q 000355 1431 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHL 1509 (1620)
Q Consensus 1431 ~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~ 1509 (1620)
..+........|.-.|+||+++ |+.++|||||.|.+.++|++..+..+.++.||...|++|. +++++.
T Consensus 451 ~~~~~~~t~~aHdKdIN~Vaia-----------~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~ 519 (775)
T KOG0319|consen 451 IVLTCRYTERAHDKDINCVAIA-----------PNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQL 519 (775)
T ss_pred ceehhhHHHHhhcccccceEec-----------CCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccce
Confidence 1222222233466779999987 4556999999999999999999999999999999999999 999999
Q ss_pred EEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeec
Q 000355 1510 LVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVD 1586 (1620)
Q Consensus 1510 LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~ 1586 (1620)
++|+|.|+||+||.+.+. .++.++.||+..|. +|-.+|+.|+|++.|| |++|++. ++.+. . +.
T Consensus 520 laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnik-----t~eC~----~--tl- 585 (775)
T KOG0319|consen 520 LATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIK-----TNECE----M--TL- 585 (775)
T ss_pred eEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEecc-----chhhh----h--hh-
Confidence 999999999999999998 78899999999998 4999999999999999 9999986 22221 1 11
Q ss_pred CCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1587 NGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1587 ~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
+.|...|++++.+|++.+++|||.||.|.+|
T Consensus 586 --D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w 616 (775)
T KOG0319|consen 586 --DAHNDRVWALSVSPLLDMFVTGGGDGRIIFW 616 (775)
T ss_pred --hhccceeEEEeecCccceeEecCCCeEEEEe
Confidence 2599999999999999999999999999999
No 110
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=2.1e-30 Score=310.33 Aligned_cols=142 Identities=16% Similarity=0.111 Sum_probs=119.9
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhcc-CCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~-l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+++.||+|.++...... ....... .|..++.. ++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELK------GTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCcCcceEEEEE
Confidence 47999999999999862 457889999997642211 1122222 67888775 48999999999999
Q ss_pred eCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++ |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCc
Confidence 9999999999998 599999973 45688999999999999999999999999999999999999998 899999999
Q ss_pred ccc
Q 000355 267 VGF 269 (1620)
Q Consensus 267 a~~ 269 (1620)
++.
T Consensus 143 ~~~ 145 (316)
T cd05619 143 CKE 145 (316)
T ss_pred ceE
Confidence 873
No 111
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.97 E-value=1.6e-29 Score=289.06 Aligned_cols=313 Identities=18% Similarity=0.251 Sum_probs=259.7
Q ss_pred CCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCC-----ceeEEee------cc----cCcEEEEEEccCCCEEEE
Q 000355 1224 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-----SILSSIR------AH----HGALRSVAVGQDECTVFT 1286 (1620)
Q Consensus 1224 H~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g-----~~l~tl~------gH----~~~V~svafspdg~~LaS 1286 (1620)
|+..|.+ ++|-.. .++++|+.|-+.++|++.- .....|+ |+ +..|++++|+.+|..||+
T Consensus 177 ~~~~V~~~~WnP~~~----~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRD----GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhh----hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 7787764 766554 2389999999999999751 1111222 22 357999999999999999
Q ss_pred eccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCC
Q 000355 1287 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1364 (1620)
Q Consensus 1287 gs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~ 1364 (1620)
|+. ||.+|+|+. +|..+.+|..|+++|.++.|+..|.+|.|. ||++.+||..+|++.+.+..|+..
T Consensus 253 G~~----~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~------- 320 (524)
T KOG0273|consen 253 GSE----DGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAP------- 320 (524)
T ss_pred eec----CcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCC-------
Confidence 996 999999997 477888999999999999999999999544 999999999999999888876422
Q ss_pred CCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCC
Q 000355 1365 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1444 (1620)
Q Consensus 1365 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~ 1444 (1620)
..++.|- +...+++++.|+.|+++.+....++.++.+|.+
T Consensus 321 -----------------------~lDVdW~-----------~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g------ 360 (524)
T KOG0273|consen 321 -----------------------ALDVDWQ-----------SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHG------ 360 (524)
T ss_pred -----------------------ccceEEe-----------cCceEeecCCCceEEEEEecCCCcceeeecccC------
Confidence 1223333 256899999999999999999999999997655
Q ss_pred ccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCC---------CEEEEEe
Q 000355 1445 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APED---------HLLVSSS 1514 (1620)
Q Consensus 1445 ~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg---------~~LaSgS 1514 (1620)
.|+++.|+ |.|.+|+++|+|++++||....+.....+.+|+..|..+. +|.| ..+++++
T Consensus 361 ~V~alk~n-----------~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 361 EVNALKWN-----------PTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred ceEEEEEC-----------CCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 48888886 5668999999999999999999999999999999999988 7654 4899999
Q ss_pred CCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCc
Q 000355 1515 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1591 (1620)
Q Consensus 1515 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1591 (1620)
.|++|++||+..+ .++++|..|+.+|.+ |||+|+++|+|+.|| |.+|++. .+ +++.... .
T Consensus 430 ~dstV~lwdv~~g--v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~-----~~-------~l~~s~~---~ 492 (524)
T KOG0273|consen 430 FDSTVKLWDVESG--VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK-----TG-------KLVKSYQ---G 492 (524)
T ss_pred cCCeEEEEEccCC--ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc-----ch-------heeEeec---C
Confidence 9999999999999 788999999999995 999999999999999 9999975 22 3333332 3
Q ss_pred cccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1592 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1592 ~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+.|..++|+.+|..+..+-.||.+++.|
T Consensus 493 ~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 493 TGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred CCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 45699999999999999999999999875
No 112
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=2.2e-30 Score=310.40 Aligned_cols=141 Identities=18% Similarity=0.180 Sum_probs=120.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|.+. .++..+|+|.+.+...... ....+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELK------GTDELYAVKVLKKDVILQDDDVECTM--------TEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999999862 3568899999976432222 222223 788888877 6999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~ 142 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGM 142 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCC
Confidence 99999999999985 9998887 345789999999999999999999999999999999999999999 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 143 ~~ 144 (318)
T cd05570 143 CK 144 (318)
T ss_pred Ce
Confidence 87
No 113
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=3.8e-30 Score=305.65 Aligned_cols=148 Identities=20% Similarity=0.265 Sum_probs=129.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .++..||+|.+....... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSK------LTDNLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEc------CCCcEEEEEEEecccccC-chhHHH--------HHHHHHHhcCCCCcceE
Confidence 678999999999999999999862 356889999987543221 112223 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++.+++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~ 146 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLDKDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (301)
T ss_pred EEEEecCCeEEEEEeccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEEC
Confidence 9999999999999999999999998742 44678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 147 dfg~~~ 152 (301)
T cd07873 147 DFGLAR 152 (301)
T ss_pred cCcchh
Confidence 999987
No 114
>KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.4e-32 Score=363.33 Aligned_cols=241 Identities=39% Similarity=0.617 Sum_probs=201.0
Q ss_pred cccccccccccccchHHHHhhhhcccCCCCCCCcCCcccceeec-cCCC-CCCCCCCCCCCCCccHHhhhcc-ccccccc
Q 000355 308 WHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVID-FSTK-PDENFDSGSRDLSKSKWRLAKG-DEQLDFT 384 (1620)
Q Consensus 308 y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~d-~~~~-~~~~~~~~~rdlsk~~~~~~~~-~~~~~~~ 384 (1620)
....+..|..|+++||+|+|.+|..+||++.|+.||||||||++ |... .+..++..+|++.|+.+..... .++....
T Consensus 335 ~~s~~~~W~~~~~~n~~yl~~ln~l~~r~~~~~~~~pi~pw~~~~~~~~~l~~~d~~~~r~~~~~~~~~s~e~~~~~~~r 414 (1081)
T KOG1786|consen 335 LKSAFGRWLSGELENFQYLMHLNTLAGRSIADLAQYPIFPWVLAFYDFSGLDLLDPLTARKLLKLGGHQSDEGYERFAKR 414 (1081)
T ss_pred hhhhhcccccCchhhhhhhhhcCcccccchhhhccCcccceeeccccccchhhcChHhhhhhhhccCCCCHHHHHHHhhh
Confidence 46788999999999999999999999999999999999999995 4444 3889999999999997432221 1222233
Q ss_pred ccC------CCCCCccCccccccceeeecccccCchHHHHHHhhcccCCCCccchHHHhhcCCCCc----------cccC
Q 000355 385 YSS------SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDE----------CIPE 448 (1620)
Q Consensus 385 ~~~------~~~~~h~~~~~~s~~~~~~y~~r~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e----------liPe 448 (1620)
|+. ....+||.++++|+++++.|++|..|++.++..++.+|.+..++..++++..||+.+ +|||
T Consensus 415 ~~~~~d~~~~~~~~~~~t~~~S~~~~~~y~~r~~p~~~~~~~i~~~~~~~~d~~~~s~~~~Wt~~~~~~~~~~i~eli~~ 494 (1081)
T KOG1786|consen 415 FEEWLDQNAEDPLFHVLTHLLSPLIVMSYFARKNPLSELFLSIRRGYFPIADRLFHSRMQAWTPDEKGNLHSCIKELIPK 494 (1081)
T ss_pred hhhhhccccccccccccccccchhhhhhhhhhcCcchHHHHHhhcccccccchhhhhhhcccCcccccccchhHHHHHHH
Confidence 322 223489999999999999999999999999999999999888888888888887655 7888
Q ss_pred cccCCccccc-------CCCC---CCCcccCCCCC-CHHHHHHHHHHhhcchHHHccCCCccccc-cccCCCchhhHhcC
Q 000355 449 FYCDPQIFYS-------QHPG---MTDLAVPPWAG-SPEEFIKLHRDALESDRVSSRIHHWIDIT-FGYKMSGQAAIDAK 516 (1620)
Q Consensus 449 f~~~p~~~~~-------~~~~---~~dv~lP~Wa~-~~~~Fi~~~r~aLEs~~Vs~~l~~WIDli-fG~kq~g~~a~~~~ 516 (1620)
||++|+||.| .+.. ++||.|||||. +|++||++||+|||++|||++||||||++ |||||.|++|+.+.
T Consensus 495 ~~~~p~~l~n~~~~~lg~~~~~~~~~~~~lP~ws~~~~~~fi~~h~~ale~~~vs~~Lh~wId~~~fgykq~g~~~~~~~ 574 (1081)
T KOG1786|consen 495 FVNDPSFLENSVILDLGEKQNGDSVDDVILPPWSSSSPREFIRDHRKALESNRVSQRLHHWIDLTIFGYKQNGSAAVIAM 574 (1081)
T ss_pred hccChHHHhhhhhhhhhhhcccccccceecCcccccCHHHHHHHHhhcccccchhhccccceeeehhhhhhcchHHHHHH
Confidence 8899999998 3333 89999999998 79999999999999999999999999999 99999999999999
Q ss_pred CCCC----CCCCC-----------CC-------cccCC--cccccCCCCCCCCCCc
Q 000355 517 NVML----PSSEP-----------TK-------PKSVG--RLQLFTQPHPVRQTAT 548 (1620)
Q Consensus 517 nv~~----~~~~~-----------~~-------~~~~g--~~qlf~~pHp~r~~~~ 548 (1620)
|||+ +..+. .+ ...+| |+|+|.++||.+....
T Consensus 575 nv~~~~~~~l~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~~h~~~~~~~ 630 (1081)
T KOG1786|consen 575 NVFLVSNKHLFYVNSVLNLRGYDPLEQNILIVSNNHFKQTIKQLFPKKHSVSELTE 630 (1081)
T ss_pred HHHhhhhhhhccccchhhhcccchhhhhhhHHHhhccccchhhcccccccccccch
Confidence 9999 65422 11 12244 7999999999996654
No 115
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.97 E-value=4.6e-30 Score=310.99 Aligned_cols=231 Identities=20% Similarity=0.412 Sum_probs=209.4
Q ss_pred cCCCCCCCCCCeEEEEcCCCCEEEEeCCC--------------------------------ceeEEeecccCcEEEEEEc
Q 000355 1231 PTPAASWDGPDFLGRVGGLKDESPWKIKA--------------------------------SILSSIRAHHGALRSVAVG 1278 (1620)
Q Consensus 1231 ~Spdg~~~~~~~lasgS~D~~i~lWd~~g--------------------------------~~l~tl~gH~~~V~svafs 1278 (1620)
||.|++. +|.|-.|-.|++|.+.. ....++.||+++|..+.|+
T Consensus 386 fSddssm-----lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 386 FSDDSSM-----LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ecCCcch-----hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 7888776 88888888899998651 1245688999999999999
Q ss_pred cCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCC
Q 000355 1279 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1356 (1620)
Q Consensus 1279 pdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~ 1356 (1620)
|+.++|+|||. |++||+|++.|..|+-.++||..+|++|.|+|.|-++||+ |+|.++|.....+..+.+.+|-.
T Consensus 461 Pd~rfLlScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghls 536 (707)
T KOG0263|consen 461 PDRRFLLSCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS 536 (707)
T ss_pred ccccceeeccC----CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccccc
Confidence 99999999998 8999999999999999999999999999999999998655 99999999998888888887643
Q ss_pred ccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCC
Q 000355 1357 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1436 (1620)
Q Consensus 1357 ~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~ 1436 (1620)
+ |.|+.|+|+.+++++||.|.+||+||+.+|..++.|.||
T Consensus 537 D----------------------------------------V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 537 D----------------------------------------VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred c----------------------------------------cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 2 778888999999999999999999999999999999876
Q ss_pred CcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeC
Q 000355 1437 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSL 1515 (1620)
Q Consensus 1437 ~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1515 (1620)
.. .|.+++|+ |+|.+||+|+.||.|.+||+.+|+++..+++|.+.|.++. +.+|..||+||.
T Consensus 577 ~~------~V~al~~S-----------p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~ 639 (707)
T KOG0263|consen 577 KG------PVTALAFS-----------PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGA 639 (707)
T ss_pred CC------ceEEEEEc-----------CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCC
Confidence 54 58999987 6778999999999999999999999999999999999999 999999999999
Q ss_pred CCcEEEEECCCC
Q 000355 1516 DKTLRIWDLRRN 1527 (1620)
Q Consensus 1516 DgtI~IWDl~~~ 1527 (1620)
|++|++||+...
T Consensus 640 DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 640 DNSVRLWDLTKV 651 (707)
T ss_pred CCeEEEEEchhh
Confidence 999999999875
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=1.9e-30 Score=315.59 Aligned_cols=144 Identities=22% Similarity=0.277 Sum_probs=122.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+.++.||+|+||.||+|++. .+++.||||.+.... .......+. +|+++|+.++||||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHR------PTGRLYALKVIYGNH-EDTVRRQIC--------REIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEEC------CCCCEEEEEEEecCC-cHHHHHHHH--------HHHHHHHhCCCCCccee
Confidence 567889999999999999999862 457899999986532 222223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||+++ +|.+. ....+..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL 209 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKI 209 (353)
T ss_pred eeEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999995 76542 2346778888999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 210 ~DfG~~~~ 217 (353)
T PLN00034 210 ADFGVSRI 217 (353)
T ss_pred ccccccee
Confidence 99999984
No 117
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.3e-28 Score=265.34 Aligned_cols=285 Identities=18% Similarity=0.238 Sum_probs=229.4
Q ss_pred eeEEeecccCcEEEEEEccC-CCEEEEeccCCCCCcEEEEEeCCC---CeEEEEE-ecCCcceeEEEEeeCCCeE--EEe
Q 000355 1261 ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTR---INCVSGY-YGHEEVVNDICVLSSSGRI--ASC 1333 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspd-g~~LaSgs~d~~~DgtVrLWdl~t---g~~l~~l-~gH~~~V~sV~f~~~~~~l--aS~ 1333 (1620)
.+++++||.+.|..++|+|- |..|||||. |+.||+|+... -.|...+ .+|+..|.+|+|+|.+++| ||.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~----Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGT----DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecC----CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 46889999999999999998 899999998 99999999984 4566555 4799999999999999999 455
Q ss_pred CCcEEEEeCCCC--ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEE
Q 000355 1334 DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1411 (1620)
Q Consensus 1334 DgtV~IWD~~tg--~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~la 1411 (1620)
|.|+.||.-..+ +++.++.+|.. .|.|++|+++|++||
T Consensus 82 D~t~~Iw~k~~~efecv~~lEGHEn----------------------------------------EVK~Vaws~sG~~LA 121 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLEGHEN----------------------------------------EVKCVAWSASGNYLA 121 (312)
T ss_pred cceEEEeecCCCceeEEeeeecccc----------------------------------------ceeEEEEcCCCCEEE
Confidence 999999986655 57777777642 377888888999999
Q ss_pred EEECCCcEEEEECCCC---ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCC---
Q 000355 1412 VGIGNGSLRFIDINQG---QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--- 1485 (1620)
Q Consensus 1412 sgs~DgtVrlwDl~tg---~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~t--- 1485 (1620)
+++.|+.|-+|.+..+ ++...++.|. +-|..|.|+|.. .+|++++.|++|++|+-..
T Consensus 122 TCSRDKSVWiWe~deddEfec~aVL~~Ht------qDVK~V~WHPt~-----------dlL~S~SYDnTIk~~~~~~ddd 184 (312)
T KOG0645|consen 122 TCSRDKSVWIWEIDEDDEFECIAVLQEHT------QDVKHVIWHPTE-----------DLLFSCSYDNTIKVYRDEDDDD 184 (312)
T ss_pred EeeCCCeEEEEEecCCCcEEEEeeecccc------ccccEEEEcCCc-----------ceeEEeccCCeEEEEeecCCCC
Confidence 9999999999998754 4566666554 447778887544 5899999999999998773
Q ss_pred CcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEE
Q 000355 1486 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLS 1563 (1620)
Q Consensus 1486 g~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vw 1563 (1620)
-.+++++.+|.+.|++++ .+.|..|+||+.|++|+||...+.. -.-|+..+..+..+...++|++.|. |++|
T Consensus 185 W~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~------~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf 258 (312)
T KOG0645|consen 185 WECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL------SGMHSRALYDVPWDNGVIASGGGDDAIRLF 258 (312)
T ss_pred eeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc------chhcccceEeeeecccceEeccCCCEEEEE
Confidence 358999999999999999 8899999999999999999877542 1347778887777778899998888 9999
Q ss_pred eccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecC-CCEEEEEeCCCcEEEc
Q 000355 1564 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1564 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPd-g~lLasgs~DG~IrlW 1619 (1620)
.-+... .+..- ++.....+ .|...|++++|+|. ..+|++||+||.|++|
T Consensus 259 ~~s~~~-d~p~~-----~l~~~~~~-aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W 308 (312)
T KOG0645|consen 259 KESDSP-DEPSW-----NLLAKKEG-AHEVDVNSVQWNPKVSNRLASGGDDGIVNFW 308 (312)
T ss_pred EecCCC-CCchH-----HHHHhhhc-ccccccceEEEcCCCCCceeecCCCceEEEE
Confidence 865211 11111 11111122 58889999999995 6789999999999999
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=4.9e-30 Score=302.46 Aligned_cols=148 Identities=16% Similarity=0.092 Sum_probs=127.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|++.+.||+|+||+||++.+. .+++.||+|.+.......... ..+. +|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc------CCCceEEEEEEehhhhhhhhhHHHHH--------HHHHHHHhcCCCCEeeee
Confidence 4889999999999999999862 457899999987643322221 2233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+++.+++||||++ |+|.+++.......+++..++.++.|++.||.|||++||+||||||+|||+++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~ 144 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 5999888754445689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 Dfg~~~ 150 (285)
T cd05605 145 DLGLAV 150 (285)
T ss_pred eCCCce
Confidence 999987
No 119
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=5.3e-30 Score=307.86 Aligned_cols=147 Identities=16% Similarity=0.108 Sum_probs=125.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
+|+..+.||+|+||.||+|.+. .+++.||+|++.+...... ....+. .|..++..+. |++|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCchhhe
Confidence 4778899999999999999862 4678999999876432222 222233 7888888886 5788899
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+.+.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL 142 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEE
Confidence 999999999999999998 59999987 456789999999999999999999999999999999999999999 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~Dfg~~~~ 150 (323)
T cd05615 143 ADFGMCKE 150 (323)
T ss_pred eccccccc
Confidence 99999873
No 120
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.97 E-value=1.7e-29 Score=306.09 Aligned_cols=244 Identities=23% Similarity=0.373 Sum_probs=214.2
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC-------------------------------CeEEE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-------------------------------INCVS 1309 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t-------------------------------g~~l~ 1309 (1620)
|..++..-...|+|+.|++|++.+|.|-. |..|++|.+.. +....
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~ 445 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFV----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSR 445 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhcccc----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeE
Confidence 56667666678999999999998888887 89999999852 11345
Q ss_pred EEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCC
Q 000355 1310 GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1387 (1620)
Q Consensus 1310 ~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~ 1387 (1620)
++.||+++|.++.|+|+.++|.|| |++||+|.+.+..++-.+.+|. .+
T Consensus 446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~------------------------------~P 495 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHL------------------------------AP 495 (707)
T ss_pred EeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCC------------------------------cc
Confidence 688999999999999999999665 9999999999999988887653 34
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCC
Q 000355 1388 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1467 (1620)
Q Consensus 1388 v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~ 1467 (1620)
|+.+.|.| -|-++||||.|++.++|......+++.+.+|.. -|.|+.|+ |+.+
T Consensus 496 VwdV~F~P----------~GyYFatas~D~tArLWs~d~~~PlRifaghls------DV~cv~FH-----------PNs~ 548 (707)
T KOG0263|consen 496 VWDVQFAP----------RGYYFATASHDQTARLWSTDHNKPLRIFAGHLS------DVDCVSFH-----------PNSN 548 (707)
T ss_pred eeeEEecC----------CceEEEecCCCceeeeeecccCCchhhhccccc------ccceEEEC-----------Cccc
Confidence 55555554 599999999999999999999899888887654 48899987 6668
Q ss_pred EEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--
Q 000355 1468 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-- 1544 (1620)
Q Consensus 1468 ~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-- 1544 (1620)
++|+||.|.+||+||+.+|..++.|.||.++|.+|+ +|+|++|+||+.||.|++||+.++ ..+..+.+|++.|.+
T Consensus 549 Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~--~~v~~l~~Ht~ti~Sls 626 (707)
T KOG0263|consen 549 YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG--SLVKQLKGHTGTIYSLS 626 (707)
T ss_pred ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC--cchhhhhcccCceeEEE
Confidence 999999999999999999999999999999999999 999999999999999999999998 677899999999985
Q ss_pred EeecCCEEEEEeCCc-eEEEeccC
Q 000355 1545 FSVWGQDVISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1545 fSpdg~~LaSgs~D~-I~vwdl~~ 1567 (1620)
||.||..||+|+.|. |++||+..
T Consensus 627 FS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 627 FSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred EecCCCEEEecCCCCeEEEEEchh
Confidence 999999999999999 99999874
No 121
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.9e-30 Score=323.57 Aligned_cols=151 Identities=14% Similarity=0.086 Sum_probs=129.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||+||+|++ ..+++.||||.+............+. +|+.+|..++|+||+++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~------~~~g~~vAvK~i~~~~~~~~~~~~~~--------~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKR------VSDGEPFAVKVVDMEGMSEADKNRAQ--------AEVCCLLNCDFFSIVKC 96 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEE------cCCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHhcCCCCcEEEe
Confidence 56999999999999999999986 24678999999977555444444444 89999999999999999
Q ss_pred eeEEEeCC--------EEEEEEeCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 183 LGLLKTSG--------LITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 183 ~~~~~~~~--------~~~lV~E~~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
++.+...+ .+++||||++ |+|.++++.. ....+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 97 HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176 (496)
T ss_pred ecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence 98876433 4789999999 5999998742 23568999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCccc
Q 000355 252 TDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~~ 269 (1620)
+.++ .+||+|||+++.
T Consensus 177 ~~~~--~vkL~DFGls~~ 192 (496)
T PTZ00283 177 CSNG--LVKLGDFGFSKM 192 (496)
T ss_pred eCCC--CEEEEecccCee
Confidence 9998 899999999984
No 122
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=6.3e-30 Score=300.63 Aligned_cols=148 Identities=19% Similarity=0.245 Sum_probs=128.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||+|+||.||+|++. .++..||+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK------KTGQIVAMKKIRLESEEEGVPSTAI--------REISLLKELQHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEEC------CCCcEEEEEEeccccccCCchHHHH--------HHHHHHHhcCCCCEeeeEE
Confidence 5889999999999999999862 4578999999865432222222333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++.+|+||||++++|.+++.... +..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 144 (285)
T cd07861 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLAD 144 (285)
T ss_pred EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECc
Confidence 999999999999999999999987533 35689999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 145 fg~~~ 149 (285)
T cd07861 145 FGLAR 149 (285)
T ss_pred cccee
Confidence 99987
No 123
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=6e-29 Score=324.74 Aligned_cols=188 Identities=13% Similarity=0.091 Sum_probs=149.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|+++++||+|+||.||+|.+. .+++.||||++.............+. +|+.+++.++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiKvi~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~Iv~~ 69 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKK------NNSKLYAVKVVKKADMINKNMVHQVQ-------AERDALALSKSPFIVHL 69 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCcEEEEEEEehhhccCHHHHHHHH-------HHHHHHHhcCCCCcCeE
Confidence 678999999999999999999972 35789999999764433333323332 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+||||||+. ++|.+++.. .+.+++..++.|+.||+.||.|||.+||+||||||+||||+.++ .+||
T Consensus 70 ~~~~~~~~~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL 145 (669)
T cd05610 70 YYSLQSANNVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145 (669)
T ss_pred EEEEEECCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEE
Confidence 999999999999999997 499999973 45688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccc-cccccccccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRG 318 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y-~~~~d~W~~G 318 (1620)
+|||+++........ .....+|+.|++||....... .-..+.|+.|
T Consensus 146 ~DFGls~~~~~~~~~-----------~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g 192 (669)
T cd05610 146 TDFGLSKVTLNRELN-----------MMDILTTPSMAKPKNDYSRTPGQVLSLISSLG 192 (669)
T ss_pred EeCCCCccccCCccc-----------ccccccCccccCccccccCCCCceeeeeeecC
Confidence 999999954321110 112347888999995433222 2244455555
No 124
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=3.9e-29 Score=312.36 Aligned_cols=276 Identities=20% Similarity=0.304 Sum_probs=239.4
Q ss_pred CCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-Cc--eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEE
Q 000355 1225 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-AS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1299 (1620)
Q Consensus 1225 ~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~--~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrL 1299 (1620)
...|.+ ||+||.+ +++++.|+.+++|+.. ++ .++++.+|...|++++|+|+++++++|+. |++||+
T Consensus 159 ~~sv~~~~fs~~g~~-----l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiri 229 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRA-----LAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRI 229 (456)
T ss_pred cCceEEEEEcCCCCe-----EEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEE
Confidence 455554 9999998 9999999999999986 55 68888999999999999999999999997 999999
Q ss_pred EeC-CCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccc
Q 000355 1300 WEL-TRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1376 (1620)
Q Consensus 1300 Wdl-~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1376 (1620)
||+ ..+.++++++||...|++++|+|.++.++|+ |++|+|||+++|+++..+..|..
T Consensus 230 wd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~-------------------- 289 (456)
T KOG0266|consen 230 WDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD-------------------- 289 (456)
T ss_pred eeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC--------------------
Confidence 999 6669999999999999999999999777554 99999999999999999987742
Q ss_pred ccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCcccccCCccceEeeeCC
Q 000355 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTELGFPSLVSAICACGS 1454 (1620)
Q Consensus 1377 ~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~--~l~~l~~~~~~v~~~~~V~sva~~~~ 1454 (1620)
.+++++++++++.+++++.|+.|++||+.++. +++.+.++... . .+++++|+
T Consensus 290 --------------------~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~---~-~~~~~~fs-- 343 (456)
T KOG0266|consen 290 --------------------GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENS---A-PVTSVQFS-- 343 (456)
T ss_pred --------------------ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCC---C-ceeEEEEC--
Confidence 26677777889999999999999999999999 56666655432 2 57888876
Q ss_pred CccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE----eCCCCEEEEEeCCCcEEEEECCCCCCC
Q 000355 1455 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLRRNWPS 1530 (1620)
Q Consensus 1455 ~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva----spdg~~LaSgS~DgtI~IWDl~~~~~~ 1530 (1620)
|+|.++++++.|+++++||++.+..+..+.+|...++++. ++++.++++|+.|+.|++||+.++ .
T Consensus 344 ---------p~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~--~ 412 (456)
T KOG0266|consen 344 ---------PNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSG--G 412 (456)
T ss_pred ---------CCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCcc--c
Confidence 6778999999999999999999999999999988665554 678999999999999999999986 5
Q ss_pred CCeEeecC-CCCEE--EEeecCCEEEEEe--CCc-eEEEecc
Q 000355 1531 QPTVFKGH-TNGIS--GFSVWGQDVISIS--NNK-IGLSSLS 1566 (1620)
Q Consensus 1531 ~~~~l~gH-~~~V~--afSpdg~~LaSgs--~D~-I~vwdl~ 1566 (1620)
.+..+.+| ...+. ++++..+++++++ .|+ |++|...
T Consensus 413 ~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 413 ILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred hhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 66788999 66666 4899999999998 677 9999853
No 125
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=311.49 Aligned_cols=173 Identities=17% Similarity=0.183 Sum_probs=144.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..+.|.++..||.|+||+||+|.++ +++...|.|+|.. .+.....+++ -||+||..++||+||+
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nk------et~~lAAaKvIet--kseEELEDyl--------VEIeILa~CdHP~ivk 93 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNK------ETKLLAAAKVIET--KSEEELEDYL--------VEIEILAECDHPVIVK 93 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcc------cchhhhhhhhhcc--cchhHHhhhh--------hhhhhhhcCCChHHHH
Confidence 3457899999999999999999862 4567778888865 3455666776 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
|++.|..++.++|+.|||+| -...++- .-+..+.+.+++.+++|++.||.|||+++|||||||..|||++-+| .++
T Consensus 94 Ll~ayy~enkLwiliEFC~GGAVDaiml-EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dir 170 (1187)
T KOG0579|consen 94 LLSAYYFENKLWILIEFCGGGAVDAIML-ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIR 170 (1187)
T ss_pred HHHHHhccCceEEEEeecCCchHhHHHH-HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEe
Confidence 99999999999999999996 5555554 3467899999999999999999999999999999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
|+|||.+..+.... .......|||+|||||+..
T Consensus 171 LADFGVSAKn~~t~-----------qkRDsFIGTPYWMAPEVvm 203 (1187)
T KOG0579|consen 171 LADFGVSAKNKSTR-----------QKRDSFIGTPYWMAPEVVM 203 (1187)
T ss_pred eecccccccchhHH-----------hhhccccCCcccccchhee
Confidence 99999987443211 1123456899999999864
No 126
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.2e-28 Score=294.13 Aligned_cols=318 Identities=18% Similarity=0.282 Sum_probs=257.7
Q ss_pred CeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCccee
Q 000355 1241 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1319 (1620)
Q Consensus 1241 ~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~ 1319 (1620)
.+||+|=..|...++.+. ..+++.+.--...|..++|+..|..||-|+. .=|.+-||++.+...+...+||...++
T Consensus 278 ~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~---klgQLlVweWqsEsYVlKQQgH~~~i~ 354 (893)
T KOG0291|consen 278 NLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS---KLGQLLVWEWQSESYVLKQQGHSDRIT 354 (893)
T ss_pred eEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCC---ccceEEEEEeeccceeeecccccccee
Confidence 449999999999999988 6799999888889999999999999999996 246999999999999999999999999
Q ss_pred EEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCc
Q 000355 1320 DICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1397 (1620)
Q Consensus 1320 sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1397 (1620)
+++++|||++++++ ||.|||||..+|-|..+|..|.. .
T Consensus 355 ~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts----------------------------------------~ 394 (893)
T KOG0291|consen 355 SLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS----------------------------------------G 394 (893)
T ss_pred eEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC----------------------------------------c
Confidence 99999999999554 99999999999999999987742 2
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCC-
Q 000355 1398 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG- 1476 (1620)
Q Consensus 1398 vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg- 1476 (1620)
|+.+.|+..|+.+++.|-||+||.||+...+..+++..... ....|++. .|.|..+.+|+.|.
T Consensus 395 Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p-----~Qfscvav-----------D~sGelV~AG~~d~F 458 (893)
T KOG0291|consen 395 VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP-----IQFSCVAV-----------DPSGELVCAGAQDSF 458 (893)
T ss_pred eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc-----eeeeEEEE-----------cCCCCEEEeeccceE
Confidence 67777778899999999999999999999999988875432 12334443 36788999999886
Q ss_pred cEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEE
Q 000355 1477 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVI 1553 (1620)
Q Consensus 1477 ~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~La 1553 (1620)
.|.+|++.||+.+..+.||+++|.+++ +|+|..|+|||+|+|||+||+-... ....++. +...|. +|+|||+.|+
T Consensus 459 ~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~-~~vEtl~-i~sdvl~vsfrPdG~ela 536 (893)
T KOG0291|consen 459 EIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS-GTVETLE-IRSDVLAVSFRPDGKELA 536 (893)
T ss_pred EEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC-ceeeeEe-eccceeEEEEcCCCCeEE
Confidence 499999999999999999999999999 9999999999999999999997653 2333443 444455 5999999999
Q ss_pred EEeCCc-eEEEeccCCCC---CCCccee----eccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1554 SISNNK-IGLSSLSKSAD---EDGQHRL----VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1554 Sgs~D~-I~vwdl~~~~~---~~g~~~~----~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+++-|| |.+||...... .+|.... .....+.... .......+++++++||+.+++||..+.|+||+
T Consensus 537 VaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~-sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~ 610 (893)
T KOG0291|consen 537 VATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAEN-SAKGKTFTTICYSADGKCILAGGESNSICIYD 610 (893)
T ss_pred EEEecceEEEEEhhhceeeccccchhhccccccccceeehhh-cccCCceEEEEEcCCCCEEEecCCcccEEEEE
Confidence 999999 99999763211 1111100 0111111111 12235789999999999999999999999985
No 127
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=5.9e-30 Score=305.98 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=117.6
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
..+||+|+||.||+|++. ...++..+|+|.+...... ..+. +|+++|+.++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~----~~~~~~~~a~k~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRK----DGKDEKEYALKQIEGTGIS----MSAC--------REIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEec----CCCccceEEEEEecCCCCc----HHHH--------HHHHHHHhCCCCCeeeEEEEEec
Confidence 368999999999999852 1235688999998653221 1222 89999999999999999999854
Q ss_pred --CCEEEEEEeCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec----CCC
Q 000355 189 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 255 (1620)
Q Consensus 189 --~~~~~lV~E~~~g~L~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~~ 255 (1620)
+..+++||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 149 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence 4588999999999999988632 123578889999999999999999999999999999999993 445
Q ss_pred ceEEEEeecCCccc
Q 000355 256 WSWLYICDKPLVGF 269 (1620)
Q Consensus 256 ~~~lKL~DFGla~~ 269 (1620)
.+||+|||+++.
T Consensus 150 --~~kl~DfG~a~~ 161 (317)
T cd07867 150 --RVKIADMGFARL 161 (317)
T ss_pred --cEEEeeccceec
Confidence 899999999983
No 128
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=5.4e-30 Score=301.24 Aligned_cols=142 Identities=17% Similarity=0.097 Sum_probs=120.5
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||+||+|.+. .+++.+|+|.+........ ....+. .|+++++.++||||+++++++..++
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMR------ATGKLYACKKLNKKRLKKRKGYEGAM--------VEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEc------cCCcEEEEEeeeHHHHhhhHHHHHHH--------HHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 799999999999862 4678999999875432222 122233 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 191 LITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+|+||||++| +|.+.+... ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~ 144 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLA 144 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccc
Confidence 99999999984 998887532 345689999999999999999999999999999999999999988 8999999998
Q ss_pred cc
Q 000355 268 GF 269 (1620)
Q Consensus 268 ~~ 269 (1620)
+.
T Consensus 145 ~~ 146 (280)
T cd05608 145 VE 146 (280)
T ss_pred ee
Confidence 73
No 129
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.6e-29 Score=266.56 Aligned_cols=277 Identities=18% Similarity=0.245 Sum_probs=232.0
Q ss_pred cccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1217 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
....+.+|++.|.+ |..||.| ..|++.|+++++|+.. |.+++++.||...|..++.+.|+..+++||.
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY-----~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg---- 79 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNY-----CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG---- 79 (307)
T ss_pred hceeecccccceEEEEEccCCCE-----EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCC----
Confidence 34567789999997 8888887 9999999999999977 9999999999999999999999999999998
Q ss_pred CcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCC--ceEEEEeccCCccccccCCCCCcc
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg--~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
|+.|.+||++||+..+.|.||.+.|+.|+|+.+...++|+ |.++++||.++. ++++.+..
T Consensus 80 Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQilde---------------- 143 (307)
T KOG0316|consen 80 DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDE---------------- 143 (307)
T ss_pred CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhh----------------
Confidence 8999999999999999999999999999999888888655 999999999865 34544432
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceE
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1449 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sv 1449 (1620)
...+|.++... +..|++|+.||++|.||++.|+....+- ...|+|+
T Consensus 144 --------------a~D~V~Si~v~------------~heIvaGS~DGtvRtydiR~G~l~sDy~--------g~pit~v 189 (307)
T KOG0316|consen 144 --------------AKDGVSSIDVA------------EHEIVAGSVDGTVRTYDIRKGTLSSDYF--------GHPITSV 189 (307)
T ss_pred --------------hcCceeEEEec------------ccEEEeeccCCcEEEEEeecceeehhhc--------CCcceeE
Confidence 12344444444 4589999999999999999998765443 3448999
Q ss_pred eeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE---eCCCCEEEEEeCCCcEEEEECCC
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1450 a~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~ 1526 (1620)
+|+ ++|+...+|+-|+++++.|-.||++++..+||.+.-..+. ......+++||+||.|.+||+.+
T Consensus 190 s~s-----------~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd 258 (307)
T KOG0316|consen 190 SFS-----------KDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVD 258 (307)
T ss_pred Eec-----------CCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecc
Confidence 986 6778999999999999999999999999999988766665 45567899999999999999998
Q ss_pred CCCCCCeEeecCCCC-EEE--EeecCCEEEEEeCCceEEEec
Q 000355 1527 NWPSQPTVFKGHTNG-ISG--FSVWGQDVISISNNKIGLSSL 1565 (1620)
Q Consensus 1527 ~~~~~~~~l~gH~~~-V~a--fSpdg~~LaSgs~D~I~vwdl 1565 (1620)
. ..+..+..|... |.+ +.|.-..+++++..++..|--
T Consensus 259 ~--~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~ 298 (307)
T KOG0316|consen 259 E--TQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWYQ 298 (307)
T ss_pred c--eeeeeeccCCceeEEeeecccCccceeEecCCceeceee
Confidence 7 556666666665 443 777777788888777777763
No 130
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.1e-29 Score=303.04 Aligned_cols=150 Identities=27% Similarity=0.258 Sum_probs=128.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .++..||+|.+............. ++|+.++++++||||++
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~--------~~E~~~l~~l~h~~i~~ 70 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDT------TSGEIVALKKVRMDNERDGIPISS--------LREITLLLNLRHPNIVE 70 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCCcchh--------hHHHHHHHhCCCCCCcc
Confidence 4789999999999999999999862 457899999987543222111122 38999999999999999
Q ss_pred eeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 182 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 182 l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++... +.+++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~ 147 (309)
T cd07845 71 LKEVVVGKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--CL 147 (309)
T ss_pred eEEEEecCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CE
Confidence 99999765 578999999999999998743 35689999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 148 kL~dfg~~~ 156 (309)
T cd07845 148 KIADFGLAR 156 (309)
T ss_pred EECccceee
Confidence 999999987
No 131
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=4.3e-28 Score=280.26 Aligned_cols=348 Identities=14% Similarity=0.231 Sum_probs=251.5
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc---eeEEeecccCcEEEEEEccCCCEEEEeccCCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1292 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~---~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1292 (1620)
...+..|+-.|.. +||.|.| +|+|...|+|||||..++ +..+++--.++|..++|+.|++.++..|.+.+
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~y-----iASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGre 126 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFY-----IASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE 126 (603)
T ss_pred eeeeccccceeEEEEeCCCceE-----EeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence 4456667666663 9999998 999999999999998752 34556666778888888888887777775322
Q ss_pred CCcEEEEEeCCC-----------------------------------------CeEEEEEecCCcceeEEEEeeCCCeEE
Q 000355 1293 FKGTVQKWELTR-----------------------------------------INCVSGYYGHEEVVNDICVLSSSGRIA 1331 (1620)
Q Consensus 1293 ~DgtVrLWdl~t-----------------------------------------g~~l~~l~gH~~~V~sV~f~~~~~~la 1331 (1620)
.=|.+.+||..+ -+...+++.|...|+||.|+|+|.+++
T Consensus 127 rfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fa 206 (603)
T KOG0318|consen 127 RFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFA 206 (603)
T ss_pred ceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEE
Confidence 234555666432 233445566999999999999999995
Q ss_pred E--eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCE
Q 000355 1332 S--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER 1409 (1620)
Q Consensus 1332 S--~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~ 1409 (1620)
| .||+|.+||-.+|+.+..+... ..|.+.|++++|+ ||+..
T Consensus 207 t~gsDgki~iyDGktge~vg~l~~~---------------------------~aHkGsIfalsWs----------PDs~~ 249 (603)
T KOG0318|consen 207 TAGSDGKIYIYDGKTGEKVGELEDS---------------------------DAHKGSIFALSWS----------PDSTQ 249 (603)
T ss_pred EecCCccEEEEcCCCccEEEEecCC---------------------------CCccccEEEEEEC----------CCCce
Confidence 4 4999999999999999888742 2355666666655 57999
Q ss_pred EEEEECCCcEEEEECCCCceeEEeeCCCcc-------cccCCccceEeeeCC-------------------CccccCccc
Q 000355 1410 LVVGIGNGSLRFIDINQGQKLHLWRGEPTE-------LGFPSLVSAICACGS-------------------EKMQAGGAV 1463 (1620)
Q Consensus 1410 lasgs~DgtVrlwDl~tg~~l~~l~~~~~~-------v~~~~~V~sva~~~~-------------------~~~~~~g~~ 1463 (1620)
+++++.|.++|+||+.+++++++|...... +.....+-.|..++. ........+
T Consensus 250 ~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~ 329 (603)
T KOG0318|consen 250 FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVS 329 (603)
T ss_pred EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEc
Confidence 999999999999999999888777543220 001111112222111 111233456
Q ss_pred CCCCEEEEEecCCcEEEEECCCCcE-----------EEEEEccC------------------------------------
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGNV-----------IASWRAHD------------------------------------ 1496 (1620)
Q Consensus 1464 p~g~~LasGs~Dg~I~lwD~~tg~~-----------i~~l~gH~------------------------------------ 1496 (1620)
+++++|.+|+.||.|.-||..+|.. +..+..++
T Consensus 330 ~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~ 409 (603)
T KOG0318|consen 330 PDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPK 409 (603)
T ss_pred CCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCce
Confidence 7889999999999999999865421 11111110
Q ss_pred ----------------------------------CcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCC
Q 000355 1497 ----------------------------------GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1541 (1620)
Q Consensus 1497 ----------------------------------~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1541 (1620)
-...+++ +|++..++.|+.|+.|+||.+..+.......+..|+.+
T Consensus 410 ~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~ 489 (603)
T KOG0318|consen 410 GLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAA 489 (603)
T ss_pred eEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCC
Confidence 0234666 78888999999999999999987654444567789999
Q ss_pred EEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1542 ISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1542 V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
|++ +|||+.+||+|...+ |.+||++. .. +..+.|.. |...|.+++|+|+++++||||-|-.|.|
T Consensus 490 iT~vaySpd~~yla~~Da~rkvv~yd~~s-----~~---~~~~~w~F-----HtakI~~~aWsP~n~~vATGSlDt~Vii 556 (603)
T KOG0318|consen 490 ITDVAYSPDGAYLAAGDASRKVVLYDVAS-----RE---VKTNRWAF-----HTAKINCVAWSPNNKLVATGSLDTNVII 556 (603)
T ss_pred ceEEEECCCCcEEEEeccCCcEEEEEccc-----Cc---eecceeee-----eeeeEEEEEeCCCceEEEeccccceEEE
Confidence 984 999999999999888 99999862 11 12233332 7788999999999999999999999999
Q ss_pred cC
Q 000355 1619 CC 1620 (1620)
Q Consensus 1619 Wd 1620 (1620)
|.
T Consensus 557 ys 558 (603)
T KOG0318|consen 557 YS 558 (603)
T ss_pred EE
Confidence 94
No 132
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.97 E-value=2.4e-30 Score=297.31 Aligned_cols=286 Identities=17% Similarity=0.263 Sum_probs=238.0
Q ss_pred CceeEEeecccCcEEEEEEcc-CCCEEEEeccCCCCCcEEEEEeCCC-CeEEEEEecCCcceeEEEEeeCCCeE--EEeC
Q 000355 1259 ASILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1334 (1620)
Q Consensus 1259 g~~l~tl~gH~~~V~svafsp-dg~~LaSgs~d~~~DgtVrLWdl~t-g~~l~~l~gH~~~V~sV~f~~~~~~l--aS~D 1334 (1620)
.+.+.++.||+..|.++.|.| .+.+|+|||. |+.|+||++.. +.|+++|.||..+|.+++|+.++..+ +|.|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gm----D~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGM----DGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCC----CceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 456889999999999999999 8899999998 99999999876 89999999999999999999999988 5559
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC-CEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVG 1413 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~lasg 1413 (1620)
++|++||++||+++..+... ...+|+.++|++ +.+++|
T Consensus 280 ~~lKlwDtETG~~~~~f~~~-----------------------------------------~~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRFHLD-----------------------------------------KVPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred eeeeeeccccceEEEEEecC-----------------------------------------CCceeeecCCCCCcEEEEe
Confidence 99999999999999888642 235677777887 889999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~ 1493 (1620)
+.|+.|+.||+|+++.++.+..|.+ .|..+.|. ++|..+++.++|+++++|+.+.+-.++...
T Consensus 319 ~sd~ki~~wDiRs~kvvqeYd~hLg------~i~~i~F~-----------~~g~rFissSDdks~riWe~~~~v~ik~i~ 381 (503)
T KOG0282|consen 319 GSDKKIRQWDIRSGKVVQEYDRHLG------AILDITFV-----------DEGRRFISSSDDKSVRIWENRIPVPIKNIA 381 (503)
T ss_pred cCCCcEEEEeccchHHHHHHHhhhh------heeeeEEc-----------cCCceEeeeccCccEEEEEcCCCccchhhc
Confidence 9999999999999999988876544 47778775 566899999999999999999987766543
Q ss_pred -ccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCC-CCCCeEeecCCCCEE----EEeecCCEEEEEeCCc-eEEEec
Q 000355 1494 -AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW-PSQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1494 -gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~-~~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl 1565 (1620)
.+.....+|. +|++.+++.-|.|+.|.++.+...- ......++||..+-. .|||||.+|++|+.|| +.+||.
T Consensus 382 ~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 382 DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDW 461 (503)
T ss_pred chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeec
Confidence 2334556778 9999999999999999999976532 123347888876433 3999999999999999 999997
Q ss_pred cCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCC-CEEEEEeCCCcEEEcC
Q 000355 1566 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1566 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg-~lLasgs~DG~IrlWd 1620 (1620)
.. .+++.. ...|.+++..+.|+|.. ..+||||.||.|++|+
T Consensus 462 kt------------~kl~~~--lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 462 KT------------TKLVSK--LKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred hh------------hhhhhc--cccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 51 122221 22588999999999987 4699999999999997
No 133
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=308.65 Aligned_cols=164 Identities=23% Similarity=0.300 Sum_probs=135.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
-+||+|+||+||-|+| ..+....|||-+.... + +... |...||.+.+.|+|.|||+++|.+..+
T Consensus 581 vVLGKGTYG~VYA~RD------~~tqvrIaIKEIpekd-s-r~~Q--------PLhEEIaLH~~LrHkNIVrYLGs~sen 644 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARD------MDTQVRIAIKEIPEKD-S-REVQ--------PLHEEIALHSTLRHKNIVRYLGSVSEN 644 (1226)
T ss_pred EEeecCceeEEEeecc------ccceeEEEeeeccccc-c-hhhc--------cHHHHHHHHHHHhhHhHHHHhhccCCC
Confidence 3799999999999997 2455788999986532 2 1111 334899999999999999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-CCceEEEEeecC
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDKP 265 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~lKL~DFG 265 (1620)
+++-|.||-.+| +|.++++. +.+++ .|..+.+|.+||++||+|||++.|||||||-+|+||+. .| .+||+|||
T Consensus 645 Gf~kIFMEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySG--vlKISDFG 721 (1226)
T KOG4279|consen 645 GFFKIFMEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSG--VLKISDFG 721 (1226)
T ss_pred CeEEEEeecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccc--eEEecccc
Confidence 999999999995 99999984 67777 78889999999999999999999999999999999975 45 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
.++...+- ..|.....||..|||||++
T Consensus 722 TsKRLAgi-----------nP~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 722 TSKRLAGI-----------NPCTETFTGTLQYMAPEVI 748 (1226)
T ss_pred cchhhccC-----------CccccccccchhhhChHhh
Confidence 99854321 1223445589999999986
No 134
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.6e-29 Score=319.36 Aligned_cols=149 Identities=13% Similarity=0.139 Sum_probs=126.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
..|.+.+.||+|+||.||+|.+.. ..+..||+|.+... . .......+ +|+.+|+.++|||||+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~-----~~~~~vv~K~~~~~--~-~~~~~~~~-------~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGS-----DPKEKVVAKFVMLN--D-ERQAAYAR-------SELHCLAACDHFGIVKHF 131 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcC-----CCCeEEEEEEcccC--C-HHHHHHHH-------HHHHHHHhCCCCCEeEEE
Confidence 359999999999999999998622 22567888876542 1 22222332 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++|..++.+||||||++ |+|.++++. .....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 132 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~k 209 (478)
T PTZ00267 132 DDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIK 209 (478)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEE
Confidence 99999999999999998 599988863 2345688999999999999999999999999999999999999998 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||+++.
T Consensus 210 L~DFgla~~ 218 (478)
T PTZ00267 210 LGDFGFSKQ 218 (478)
T ss_pred EEeCcCcee
Confidence 999999984
No 135
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=6.3e-28 Score=288.05 Aligned_cols=360 Identities=14% Similarity=0.135 Sum_probs=275.8
Q ss_pred cccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC---CceeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK---ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1219 ~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~---g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
.+..||-+-|.+ ||-|.++ +++||.|-++++|.++ +-....+.||.+.|-++-|..|...++|.|.
T Consensus 139 r~~~g~fddi~si~Ws~DSr~-----l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvsk---- 209 (893)
T KOG0291|consen 139 RTYLGHFDDITSIDWSDDSRL-----LVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSK---- 209 (893)
T ss_pred eeecCCccceeEEEeccCCce-----EEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEec----
Confidence 567789888876 8888876 9999999999999988 3357788999999999999999999999998
Q ss_pred CcEEEEEeCCC-----------------------CeE-----E------EEEecCCcceeEEEEeeCCCeEEEe--CCcE
Q 000355 1294 KGTVQKWELTR-----------------------INC-----V------SGYYGHEEVVNDICVLSSSGRIASC--DGTL 1337 (1620)
Q Consensus 1294 DgtVrLWdl~t-----------------------g~~-----l------~~l~gH~~~V~sV~f~~~~~~laS~--DgtV 1337 (1620)
||.+.+|.... ++. . .-+......|++.+|++....++.+ .|..
T Consensus 210 dG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f 289 (893)
T KOG0291|consen 210 DGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEF 289 (893)
T ss_pred CceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCee
Confidence 89999997650 111 0 0112234789999999888888665 8888
Q ss_pred EEEeCCCCceEEEEeccCCc-cccccCCCCCcccccccccccccccC--CCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1338 HVWNSQTGKLLSVFAEQSMD-SLHGGSPSSSISKINTDQVGMLNSNT--LSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~-~~~~~s~s~~~~~~~~~~~~~~~~~~--~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
.++.+..-.+++.+...... ........+.-..+...+..-+..+. ....|....-+-..++|++++|||+.+|+|+
T Consensus 290 ~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~ 369 (893)
T KOG0291|consen 290 GLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA 369 (893)
T ss_pred EEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc
Confidence 99999988888877654222 11111111111111111111111111 1222332222344589999999999999999
Q ss_pred CCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1415 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.||.||+||..+|-|+.+|..|+ +.|++++|. ..|+.+++.|-||+||.||+......+++..
T Consensus 370 eDgKVKvWn~~SgfC~vTFteHt------s~Vt~v~f~-----------~~g~~llssSLDGtVRAwDlkRYrNfRTft~ 432 (893)
T KOG0291|consen 370 EDGKVKVWNTQSGFCFVTFTEHT------SGVTAVQFT-----------ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTS 432 (893)
T ss_pred CCCcEEEEeccCceEEEEeccCC------CceEEEEEE-----------ecCCEEEEeecCCeEEeeeecccceeeeecC
Confidence 99999999999999999999764 458889986 5668999999999999999999998888874
Q ss_pred c-CCcEEEEE-eCCCCEEEEEeCCCc-EEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1495 H-DGYVTKLA-APEDHLLVSSSLDKT-LRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1495 H-~~~V~sva-spdg~~LaSgS~Dgt-I~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
- .....||+ .|.|.++..|+.|.. |.+|++++| +.+-.+.||.++|.+ |+|+|..|+|||.|+ |++||+-.+
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 3 34567788 888999999998864 999999999 677899999999995 999999999999999 999998632
Q ss_pred CCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.++. ... .+...+.+++|.|||+.+|++.-||.|.+||
T Consensus 511 ---~~~v-----Etl------~i~sdvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 511 ---SGTV-----ETL------EIRSDVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred ---Ccee-----eeE------eeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 2221 111 2556799999999999999999999999997
No 136
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.97 E-value=1.3e-28 Score=281.63 Aligned_cols=277 Identities=18% Similarity=0.264 Sum_probs=239.0
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEE
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1309 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~ 1309 (1620)
+++.+|.. ||+|+.||.+++|+..|.++.+|..|.++|.+++|+.+|.+|+|||. |+++.+||..+|++.+
T Consensus 242 ~Wn~~G~~-----LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 242 DWNNDGTL-----LATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHTGTVKQ 312 (524)
T ss_pred EecCCCCe-----EEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccCceEEE
Confidence 37888876 99999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred EEecCCcceeEEEEeeCCCeEEE-eCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCe
Q 000355 1310 GYYGHEEVVNDICVLSSSGRIAS-CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1388 (1620)
Q Consensus 1310 ~l~gH~~~V~sV~f~~~~~~laS-~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1388 (1620)
.+.-|+.+-.+|.|..++....+ .|+.|+|+.+....++.++.+|...
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~------------------------------- 361 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGE------------------------------- 361 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCc-------------------------------
Confidence 99999999889999766655533 3999999999988888888876422
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCE
Q 000355 1389 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1468 (1620)
Q Consensus 1389 ~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~ 1468 (1620)
|.++.|.|.|..|+++|.|+|+++|....+.+.+.+.+|.. .|..+.++|........ ..+..
T Consensus 362 ---------V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hsk------ei~t~~wsp~g~v~~n~--~~~~~ 424 (524)
T KOG0273|consen 362 ---------VNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSK------EIYTIKWSPTGPVTSNP--NMNLM 424 (524)
T ss_pred ---------eEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhcc------ceeeEeecCCCCccCCC--cCCce
Confidence 66677777899999999999999999999988888886554 47888888766533222 45678
Q ss_pred EEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EE
Q 000355 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GF 1545 (1620)
Q Consensus 1469 LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--af 1545 (1620)
+++++.|++|++||+..|.++.++..|..+|.+|+ +|+|+++|+|+.||.|.+|+++++ +..+...+ ++.|. +|
T Consensus 425 l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~--~l~~s~~~-~~~Ifel~W 501 (524)
T KOG0273|consen 425 LASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG--KLVKSYQG-TGGIFELCW 501 (524)
T ss_pred EEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch--heeEeecC-CCeEEEEEE
Confidence 99999999999999999999999999999999999 999999999999999999999998 44445544 44566 69
Q ss_pred eecCCEEEEEeCCc-eEEEecc
Q 000355 1546 SVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1546 Spdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
+.+|..|..+-.|+ +.|-|+.
T Consensus 502 n~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 502 NAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cCCCCEEEEEecCCCceEEEec
Confidence 99999998887788 9888864
No 137
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=2.3e-29 Score=303.58 Aligned_cols=187 Identities=16% Similarity=0.174 Sum_probs=150.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.+. .++..+|+|.+.... .......+. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCcccce
Confidence 468999999999999999999862 357889999887532 222223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++|.+++.+++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEE
Confidence 9999999999999999985 99999983 45688999999999999999999985 799999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|+|||+++...... .....||..|+|||++.+..++.++|+|+.|++.
T Consensus 145 L~Dfg~~~~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 192 (333)
T cd06650 145 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 192 (333)
T ss_pred EeeCCcchhhhhhc-------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHH
Confidence 99999987431100 0112356778888877666666667777777543
No 138
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.97 E-value=4.1e-30 Score=289.47 Aligned_cols=277 Identities=16% Similarity=0.260 Sum_probs=229.6
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCC
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1345 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg 1345 (1620)
-..+|..|.|.|+|+.|++|+. .|..-||+..+-.....++.|..+|.++.|++++..+.|+ ||.||+|+....
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~----SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn 170 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQ----SGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN 170 (464)
T ss_pred cccceeeEEEcCCCceeEeecc----cccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh
Confidence 4557999999999999999997 7999999986544444567899999999999999999776 799999998754
Q ss_pred ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECC
Q 000355 1346 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425 (1620)
Q Consensus 1346 ~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~ 1425 (1620)
.. +.+..| +...|++++++|+...++++|+||+|+|||..
T Consensus 171 nV-k~~~ah---------------------------------------h~eaIRdlafSpnDskF~t~SdDg~ikiWdf~ 210 (464)
T KOG0284|consen 171 NV-KIIQAH---------------------------------------HAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR 210 (464)
T ss_pred hh-HHhhHh---------------------------------------hhhhhheeccCCCCceeEEecCCCeEEEEecc
Confidence 32 222211 11236677777789999999999999999999
Q ss_pred CCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-e
Q 000355 1426 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-A 1504 (1620)
Q Consensus 1426 tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-s 1504 (1620)
..+.-..+.+|.- .|+++.|.+.. ..||+|+.|..|++||.++|+++.++.+|+..|.++. .
T Consensus 211 ~~kee~vL~GHgw------dVksvdWHP~k-----------gLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~ 273 (464)
T KOG0284|consen 211 MPKEERVLRGHGW------DVKSVDWHPTK-----------GLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFN 273 (464)
T ss_pred CCchhheeccCCC------CcceeccCCcc-----------ceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEc
Confidence 8887777776644 48888887544 5899999999999999999999999999999999999 9
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--Eeec-CCEEEEEeCCc-eEEEeccCCCCCCCcceeecc
Q 000355 1505 PEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQ 1580 (1620)
Q Consensus 1505 pdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~ 1580 (1620)
+++++|+|+|.|..++++|+++. +.+.++++|...|++ |+|- ..++++|+.|+ |..|.+... .
T Consensus 274 ~n~N~Llt~skD~~~kv~DiR~m--kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~-----~------ 340 (464)
T KOG0284|consen 274 PNGNWLLTGSKDQSCKVFDIRTM--KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLE-----E------ 340 (464)
T ss_pred CCCCeeEEccCCceEEEEehhHh--HHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccc-----c------
Confidence 99999999999999999999966 778899999999996 6886 46778889999 999986410 0
Q ss_pred ceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1581 KLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1581 kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+-.. +.+|...|++++|+|-|.+|++|+.|.++|+|.
T Consensus 341 p~~~i--~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 341 PLGEI--PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred cccCC--CcccccceeeeeccccceeEeecCCCcceeeec
Confidence 11111 126899999999999999999999999999994
No 139
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.3e-29 Score=284.85 Aligned_cols=280 Identities=14% Similarity=0.191 Sum_probs=232.9
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC----CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK----ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~----g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
.+.+..|++.||. ||++|++ |||||.|.+..+|++. -+..+++.||..+|..+.||||.++|++||.
T Consensus 217 ~qil~~htdEVWfl~FS~nGky-----LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~-- 289 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKY-----LASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF-- 289 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCee-----EeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc--
Confidence 4567889999996 9999998 9999999999999965 3468999999999999999999999999996
Q ss_pred CCCcEEEEEeCCCCeEEEEEe-cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCc
Q 000355 1292 GFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1368 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~-gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~ 1368 (1620)
|..+++||+.||.+...+. +|...+.+++|.|++..+ +|.|+++..||+. |..+....+-.
T Consensus 290 --~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr------------- 353 (519)
T KOG0293|consen 290 --DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVR------------- 353 (519)
T ss_pred --hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccc-------------
Confidence 8899999999999988875 567999999999999988 4559999999986 44333332210
Q ss_pred ccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1369 ~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
. ..|.+++.++||+++++.+.|..|++++..+......... ...|++
T Consensus 354 -------------------------~-~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise-------~~~its 400 (519)
T KOG0293|consen 354 -------------------------D-PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISE-------EQPITS 400 (519)
T ss_pred -------------------------c-ceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccc-------cCceeE
Confidence 0 1377888899999999999999999999887655443332 334777
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE---EEEE-eCCCCEEEEEeCCCcEEEEEC
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV---TKLA-APEDHLLVSSSLDKTLRIWDL 1524 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V---~sva-spdg~~LaSgS~DgtI~IWDl 1524 (1620)
.+.+ .+|+++.+.-.+..+.+||+...+.++.+.||...- .++- --+..+++|||+|+.|+||+.
T Consensus 401 ~~iS-----------~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr 469 (519)
T KOG0293|consen 401 FSIS-----------KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHR 469 (519)
T ss_pred EEEc-----------CCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEc
Confidence 7765 456799999999999999999989999999998764 3433 456679999999999999999
Q ss_pred CCCCCCCCeEeecCCCCEEEE--eec-CCEEEEEeCCc-eEEEecc
Q 000355 1525 RRNWPSQPTVFKGHTNGISGF--SVW-GQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~af--Spd-g~~LaSgs~D~-I~vwdl~ 1566 (1620)
.++ +.+.++.||+..|+|+ +|. ..++||||+|+ |++|...
T Consensus 470 ~sg--kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 470 ISG--KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred cCC--ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 999 7788999999999974 453 46799999999 9999875
No 140
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=2e-29 Score=297.30 Aligned_cols=148 Identities=16% Similarity=0.104 Sum_probs=127.8
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|+..+.||+|+||.||+|.+. .+++.+|+|.+.......... ..+. +|+.+++.++|+||++++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGESMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEc------CCCceEEEEEEehhhccchHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 3778899999999999999872 457899999987643332222 2233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+++.+++||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~ 144 (285)
T cd05630 67 YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999984 999998754455689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 145 Dfg~~~ 150 (285)
T cd05630 145 DLGLAV 150 (285)
T ss_pred ecccee
Confidence 999987
No 141
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=2.6e-29 Score=295.06 Aligned_cols=142 Identities=15% Similarity=0.104 Sum_probs=120.6
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCCE
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 191 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~~ 191 (1620)
||+|+||.||++++. .+|+.+|+|.+.............. ..|++++++++||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~-------~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK------NTGKMYACKKLDKKRLKKKSGEKMA-------LLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc------cCCcEEEEEEEcHHHhhcchhhHHH-------HHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 799999999999862 4578999999865332221111121 279999999999999999999999999
Q ss_pred EEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 192 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 192 ~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+|+||||++| +|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~ 143 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAV 143 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeee
Confidence 9999999985 999888754555688888999999999999999999999999999999999998 89999999987
No 142
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=1.2e-29 Score=298.27 Aligned_cols=147 Identities=21% Similarity=0.235 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|++. .+|..+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~------~~g~~~~~k~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSAL--------REICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC------CCCcEEEEEEeecccccccCccchh--------HHHHHHHhcCCCCeeeHHH
Confidence 5889999999999999999962 4578899999875422221112222 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++.+.+.+++|+||++++|.+++.. ....+++..++.++.||++||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~df 143 (284)
T cd07839 67 VLHSDKKLTLVFEYCDQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADF 143 (284)
T ss_pred HhccCCceEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECcc
Confidence 9999999999999999999998874 245689999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 144 g~~~ 147 (284)
T cd07839 144 GLAR 147 (284)
T ss_pred chhh
Confidence 9987
No 143
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=3.5e-29 Score=324.67 Aligned_cols=175 Identities=18% Similarity=0.147 Sum_probs=137.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|.+. ..+..+|+|.+............+. +|+.+|+.|+|||||++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk------~tg~~vAlKvIk~~~l~e~~~~~~~--------~EI~IL~~L~HPNIVrl 77 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHK------RTQEFFCWKAISYRGLKEREKSQLV--------IEVNVMRELKHKNIVRY 77 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCeEEEEEEEeccccCHHHHHHHH--------HHHHHHHHcCCCCcCeE
Confidence 679999999999999999999972 4568899999876544444444444 89999999999999999
Q ss_pred eeEEEeC--CEEEEEEeCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCceE
Q 000355 183 LGLLKTS--GLITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-------GIAHRSVCPSNVL 250 (1620)
Q Consensus 183 ~~~~~~~--~~~~lV~E~~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-------gIiHRDLKP~NIL 250 (1620)
+++|... ..+||||||++ ++|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+|||
T Consensus 78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 9998654 57999999999 5999999742 235689999999999999999999984 5999999999999
Q ss_pred ecCCC---------------ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 251 LTDSC---------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 251 l~~~~---------------~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
|+.+. ...+||+|||+++...... ....|.||+.|+|||++
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------~~~s~vGTp~YmAPEvL 213 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------MAHSCVGTPYYWSPELL 213 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc------------cccccCCCccccCHHHH
Confidence 96531 1258999999998431110 01234467777777764
No 144
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=1.3e-27 Score=275.18 Aligned_cols=282 Identities=24% Similarity=0.419 Sum_probs=235.9
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEE--EeCCcEEE
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHV 1339 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~la--S~DgtV~I 1339 (1620)
++++++|.++|.+++|+|+++++++|+. ||.|++|++.+++....+.+|...+.++.|.+++..++ +.||.|++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSG----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeec----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4568899999999999999999999997 89999999999988889999999999999999987773 44999999
Q ss_pred EeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcE
Q 000355 1340 WNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1419 (1620)
Q Consensus 1340 WD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtV 1419 (1620)
||+.+++.+..+..+. ..+.++.++++++.+++++.|+.|
T Consensus 78 ~~~~~~~~~~~~~~~~----------------------------------------~~i~~~~~~~~~~~~~~~~~~~~i 117 (289)
T cd00200 78 WDLETGECVRTLTGHT----------------------------------------SYVSSVAFSPDGRILSSSSRDKTI 117 (289)
T ss_pred EEcCcccceEEEeccC----------------------------------------CcEEEEEEcCCCCEEEEecCCCeE
Confidence 9999877666555331 125667777778888888889999
Q ss_pred EEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1420 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1420 rlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
++||+++++....+..| ...+.+++++ +++.++++++.||.|++||+++++.+..+..|...|
T Consensus 118 ~~~~~~~~~~~~~~~~~------~~~i~~~~~~-----------~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i 180 (289)
T cd00200 118 KVWDVETGKCLTTLRGH------TDWVNSVAFS-----------PDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV 180 (289)
T ss_pred EEEECCCcEEEEEeccC------CCcEEEEEEc-----------CcCCEEEEEcCCCcEEEEEccccccceeEecCcccc
Confidence 99999988888877744 3457888876 345788888889999999999999999999999999
Q ss_pred EEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcc
Q 000355 1500 TKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1575 (1620)
Q Consensus 1500 ~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~ 1575 (1620)
.++. +++++.+++++.|+.|++||++++ .....+.+|...+.+ |++++.++++++.|+ |++|++.. +..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~-----~~~ 253 (289)
T cd00200 181 NSVAFSPDGEKLLSSSSDGTIKLWDLSTG--KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT-----GEC 253 (289)
T ss_pred ceEEECCCcCEEEEecCCCcEEEEECCCC--ceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCC-----cee
Confidence 9999 899999999999999999999886 455667788888885 888888999888677 99999862 211
Q ss_pred eeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1576 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1576 ~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
. .... .|...|.+++|+|+++.|++++.||.|++|+
T Consensus 254 ~------~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 254 V------QTLS---GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred E------EEcc---ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 1 1111 3677899999999999999999999999996
No 145
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=298.40 Aligned_cols=192 Identities=16% Similarity=0.210 Sum_probs=168.4
Q ss_pred CCeee--eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 104 TALFP--IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 104 ~~y~~--~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.-|++ .+.||.|.||+||-|.++ .+|+.||||+|.+-+...++..+.. +|+.||+.++||.||.
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hR------ktGrdVAvKvIdKlrFp~kqesqlR--------~EVaILq~l~HPGiV~ 627 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHR------KTGRDVAVKVIDKLRFPTKQESQLR--------NEVAILQNLHHPGIVN 627 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceec------ccCceeeeeeeecccCCCchHHHHH--------HHHHHHHhcCCCCeeE
Confidence 34665 689999999999999873 5789999999998777665554444 9999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-eEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-~~lK 260 (1620)
|...|++.+.++.|||.+.||+.++|-.+..+++++...++++.||+.||.|||.++|+|+||||||||+.+... .++|
T Consensus 628 le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvK 707 (888)
T KOG4236|consen 628 LECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVK 707 (888)
T ss_pred EEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCcee
Confidence 999999999999999999999888888788899999999999999999999999999999999999999976543 5899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||||+||..... .+.....|||.|.|||+++++.|+...|+|+.|.|.
T Consensus 708 lCDFGfARiIgEk------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 708 LCDFGFARIIGEK------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred eccccceeecchh------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 9999999954321 123456799999999999999999999999999886
No 146
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=4.9e-29 Score=299.96 Aligned_cols=145 Identities=18% Similarity=0.210 Sum_probs=124.6
Q ss_pred eeeceeee--eeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 108 PIAFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 108 ~~~~LG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
++++||+| +||+||++.+ ..+++.||+|.+...... ....++++ +|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~------~~~~~~vaiK~~~~~~~~-~~~~~~~~-------~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARY------KPTGEYVTVRRINLEACT-NEMVTFLQ-------GELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEee------cccCcEEEEEEechhhcc-HHHHHHHH-------HHHHHHHhcCCCCeeeEEEE
Confidence 46789999 7889999886 256899999999764333 23333443 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+..++..++||||++ |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++ .++++||
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~ 145 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGL 145 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEccc
Confidence 999999999999999 5999999754445689999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|.+.
T Consensus 146 ~~~~ 149 (327)
T cd08227 146 RSNL 149 (327)
T ss_pred chhh
Confidence 8765
No 147
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=4.1e-28 Score=303.19 Aligned_cols=281 Identities=24% Similarity=0.401 Sum_probs=241.0
Q ss_pred eEEeecc-cCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe--EEEEEecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1262 LSSIRAH-HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1262 l~tl~gH-~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~--~l~~l~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
...+.+| ..+|.++.|+++|+.+++++. |+++++|+..+++ ....+.+|...|++++|+|++.+++++ |++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~----~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASS----DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKT 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccC----CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCce
Confidence 4556555 889999999999999999987 8999999998887 778889999999999999999988544 999
Q ss_pred EEEEeC-CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC
Q 000355 1337 LHVWNS-QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1415 (1620)
Q Consensus 1337 V~IWD~-~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~ 1415 (1620)
|+|||+ ..+.+++++.+|.. .+++++|+|+|+.+++|+.
T Consensus 227 iriwd~~~~~~~~~~l~gH~~----------------------------------------~v~~~~f~p~g~~i~Sgs~ 266 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLKGHST----------------------------------------YVTSVAFSPDGNLLVSGSD 266 (456)
T ss_pred EEEeeccCCCeEEEEecCCCC----------------------------------------ceEEEEecCCCCEEEEecC
Confidence 999999 55688899987642 3677777888999999999
Q ss_pred CCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc--EEEEEE
Q 000355 1416 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWR 1493 (1620)
Q Consensus 1416 DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~--~i~~l~ 1493 (1620)
|++||+||+++++++..+.+|.. .|++++|. ++|+++++++.||.|++||+.++. ++..+.
T Consensus 267 D~tvriWd~~~~~~~~~l~~hs~------~is~~~f~-----------~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 329 (456)
T KOG0266|consen 267 DGTVRIWDVRTGECVRKLKGHSD------GISGLAFS-----------PDGNLLVSASYDGTIRVWDLETGSKLCLKLLS 329 (456)
T ss_pred CCcEEEEeccCCeEEEeeeccCC------ceEEEEEC-----------CCCCEEEEcCCCccEEEEECCCCceeeeeccc
Confidence 99999999999999999997654 58888886 667899999999999999999999 677888
Q ss_pred ccCCc--EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE-----EeecCCEEEEEeCCc-eEEEe
Q 000355 1494 AHDGY--VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-----FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1494 gH~~~--V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-----fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
++... ++++. +|++.++++++.|+++++||++.+ ..+....+|...+.| .++.++++++|+.|+ |.+|+
T Consensus 330 ~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~ 407 (456)
T KOG0266|consen 330 GAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG--KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWD 407 (456)
T ss_pred CCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC--cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEe
Confidence 77766 89999 999999999999999999999988 667788999887544 467899999999999 99999
Q ss_pred ccCCCCCCCcceeeccceeeecCCCCc-cccEEEEEEecCCCEEEEEe--CCCcEEEc
Q 000355 1565 LSKSADEDGQHRLVPQKLYMVDNGAKN-LSVLSSISILPFSRLFLVGT--EDGYLRLC 1619 (1620)
Q Consensus 1565 l~~~~~~~g~~~~~~~kl~~~~~g~~h-~~~V~svafsPdg~lLasgs--~DG~IrlW 1619 (1620)
++. +.. ..++ .+| ...+..++++|...++++++ .|+.|++|
T Consensus 408 ~~s-----~~~---~~~l------~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w 451 (456)
T KOG0266|consen 408 SSS-----GGI---LQRL------EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLW 451 (456)
T ss_pred CCc-----cch---hhhh------cCCCCCceeccccCCCcCeeeecCcCCCceEEEe
Confidence 862 211 1111 246 78899999999999999998 69999999
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.96 E-value=9.7e-29 Score=286.86 Aligned_cols=147 Identities=16% Similarity=0.122 Sum_probs=127.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh---HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~---~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
+.|++.+.||+|+||.||+|.+. .+++.+|+|.+......... ...+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~lk~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~ 67 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV------DTGRELAVKQVPFDPDSPETKKEVNALE--------CEIQLLKNLQHERIV 67 (263)
T ss_pred CcccccceecCCCceEEEEEEEc------CCCcEEEEEEEeecccchhhHHHHHHHH--------HHHHHHHhCCCCCee
Confidence 46889999999999999999862 45788999998754332221 12222 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++..++.+++||||+++ +|.+.+.. ...+++..++.+++|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~ 143 (263)
T cd06625 68 QYYGCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NV 143 (263)
T ss_pred eeEEEEccCCeEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 999999999999999999985 99999973 45688999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 144 ~l~dfg~~~ 152 (263)
T cd06625 144 KLGDFGASK 152 (263)
T ss_pred EEeecccce
Confidence 999999987
No 149
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=4.7e-30 Score=282.08 Aligned_cols=274 Identities=16% Similarity=0.253 Sum_probs=223.4
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCC
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG 1345 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg 1345 (1620)
-..+|.|+.+. ...++||.. |+||++||..+-.|++.+.||++.|.|+.|. .+.+ +|.|.||+|||+++|
T Consensus 196 ~skgVYClQYD--D~kiVSGlr----DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLR----DNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEec--chhhhcccc----cCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 45679999985 457999998 9999999999999999999999999999984 3344 556999999999999
Q ss_pred ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECC
Q 000355 1346 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1425 (1620)
Q Consensus 1346 ~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~ 1425 (1620)
+++.++-+|. ..|.-+.|+ +.+++++|.|.++++||+.
T Consensus 268 e~l~tlihHc------------------------------eaVLhlrf~------------ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 268 EPLNTLIHHC------------------------------EAVLHLRFS------------NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred chhhHHhhhc------------------------------ceeEEEEEe------------CCEEEEecCCceeEEEecc
Confidence 9998887652 335555555 4599999999999999998
Q ss_pred CCce---eEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEE
Q 000355 1426 QGQK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1426 tg~~---l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sv 1502 (1620)
.... .+.+.| |...|+.|.|+ .+++++++.|.+|++|++.|++.++++.||...|-|+
T Consensus 306 sps~it~rrVLvG------HrAaVNvVdfd-------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIACl 366 (499)
T KOG0281|consen 306 SPTDITLRRVLVG------HRAAVNVVDFD-------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 366 (499)
T ss_pred CchHHHHHHHHhh------hhhheeeeccc-------------cceEEEecCCceEEEEeccceeeehhhhcccccceeh
Confidence 7542 233444 45557777764 3799999999999999999999999999999998777
Q ss_pred EeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccc
Q 000355 1503 AAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQK 1581 (1620)
Q Consensus 1503 aspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~k 1581 (1620)
. -.|++++|||.|.+|++||+..| .++..+.||.+-|.|+-.|.+.++||+.|| |+|||+.+..+ ... ....
T Consensus 367 Q-Yr~rlvVSGSSDntIRlwdi~~G--~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aald--pra--~~~~ 439 (499)
T KOG0281|consen 367 Q-YRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALD--PRA--PAST 439 (499)
T ss_pred h-ccCeEEEecCCCceEEEEecccc--HHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccC--Ccc--cccc
Confidence 5 46899999999999999999999 778899999999999999999999999999 99999974322 111 1111
Q ss_pred eeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1582 LYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1582 l~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+ ....-..|.+.|..+.| |...+++++.|.+|-|||
T Consensus 440 ~-Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 440 L-CLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 475 (499)
T ss_pred h-HHHhhhhccceeEEEee--cceEEEeccCCCeEEEEE
Confidence 1 11111257888999999 678899999999999997
No 150
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-31 Score=333.52 Aligned_cols=177 Identities=19% Similarity=0.188 Sum_probs=146.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.-+|+...+||.|.||.||-|.+ ..+|+..|+|-++-............ +|..+|..|+|||+|++
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN------~~tGellAvKEI~iq~~~~k~~~~i~--------eEm~vlE~lnHpNlV~Y 1299 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVN------LDTGELLAVKEIKIQDSDHKTFKLIA--------EEMKVLEGLNHPNLVRY 1299 (1509)
T ss_pred eeeeccccccCCcceeeeEEeec------CCccchhhhhhhhcCccccccCcchH--------HHHHHHHhccCcccccc
Confidence 34788899999999999999986 47889999999876544433333333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|++-.+.+.++|.||||. |+|.+++. .++...|...+.|..|++.|+.|||+.|||||||||+||+++.+| .+|+
T Consensus 1300 yGVEvHRekv~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~ 1375 (1509)
T KOG4645|consen 1300 YGVEVHREKVYIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKY 1375 (1509)
T ss_pred CceeecHHHHHHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEe
Confidence 999999999999999999 59999998 455677778899999999999999999999999999999999999 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~ 304 (1620)
.|||.|+......+ ..+.......||+.|||||++.
T Consensus 1376 ~DFGsa~ki~~~~~-------~~~~el~~~~GT~~YMAPEvit 1411 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQ-------TMPGELQSMMGTPMYMAPEVIT 1411 (1509)
T ss_pred ecccceeEecCchh-------cCCHHHHhhcCCchhcCchhhc
Confidence 99999995543211 1111233556899999999863
No 151
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2.7e-28 Score=257.38 Aligned_cols=275 Identities=25% Similarity=0.340 Sum_probs=227.9
Q ss_pred CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1259 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1259 g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
.+.++.+..|.++|+++.|+-||++.++||. |++||+|+...|.+++++.||...|.+++.+.++..++|| |+.
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGs----drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGS----DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCC----CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 3467889999999999999999999999998 9999999999999999999999999999999999999777 999
Q ss_pred EEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECC
Q 000355 1337 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1416 (1620)
Q Consensus 1337 V~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~D 1416 (1620)
|.+||+.||+.++.+.+|... |+.++|+.+...+++|+.|
T Consensus 83 v~vwDV~TGkv~Rr~rgH~aq----------------------------------------VNtV~fNeesSVv~SgsfD 122 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGHLAQ----------------------------------------VNTVRFNEESSVVASGSFD 122 (307)
T ss_pred EEEEEcccCeeeeecccccce----------------------------------------eeEEEecCcceEEEecccc
Confidence 999999999999999877422 4455555668899999999
Q ss_pred CcEEEEECCCC--ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1417 GSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1417 gtVrlwDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.++|+||.++. ++++.+... ...|.+|... +.-|++|+.||++|.||+|.|+......+
T Consensus 123 ~s~r~wDCRS~s~ePiQildea------~D~V~Si~v~-------------~heIvaGS~DGtvRtydiR~G~l~sDy~g 183 (307)
T KOG0316|consen 123 SSVRLWDCRSRSFEPIQILDEA------KDGVSSIDVA-------------EHEIVAGSVDGTVRTYDIRKGTLSSDYFG 183 (307)
T ss_pred ceeEEEEcccCCCCccchhhhh------cCceeEEEec-------------ccEEEeeccCCcEEEEEeecceeehhhcC
Confidence 99999999875 566666543 3346666643 36799999999999999999998877665
Q ss_pred cCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE----EEeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1495 HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1495 H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
.+|+++. ++|++..+.++.|+++++-|-.++ +.+...+||.+.-. |++.....+++||.|| |.+||+..
T Consensus 184 --~pit~vs~s~d~nc~La~~l~stlrLlDk~tG--klL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd- 258 (307)
T KOG0316|consen 184 --HPITSVSFSKDGNCSLASSLDSTLRLLDKETG--KLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVD- 258 (307)
T ss_pred --CcceeEEecCCCCEEEEeeccceeeecccchh--HHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecc-
Confidence 5899999 999999999999999999999999 67788899987544 4777888999999999 99999862
Q ss_pred CCCCCcceeeccceeeecCCCCcccc-EEEEEEecCCCEEEEEeCCC
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSV-LSSISILPFSRLFLVGTEDG 1614 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~-V~svafsPdg~lLasgs~DG 1614 (1620)
+.. ..++. -+..+ |.+++++|.-.-|.++..-+
T Consensus 259 ----~~~---~sk~~------~~~~v~v~dl~~hp~~~~f~~A~~~~ 292 (307)
T KOG0316|consen 259 ----ETQ---ISKLS------VVSTVIVTDLSCHPTMDDFITATGHG 292 (307)
T ss_pred ----cee---eeeec------cCCceeEEeeecccCccceeEecCCc
Confidence 221 11221 13334 89999999988777776443
No 152
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.96 E-value=9.9e-29 Score=291.33 Aligned_cols=148 Identities=16% Similarity=0.097 Sum_probs=127.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|+..+.||+|+||+||+|.+. .+++.+|+|.+.......... ..+. +|+++|+.++|+||++++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKRLEKKRIKKRKGESMAL--------NEKQILEKVNSQFVVNLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEC------CCCcEEEEEEeehhhhhhhhHHHHHH--------HHHHHHHHcCCcCceeEE
Confidence 3778899999999999999862 467899999987643332222 2233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+..++.+++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~ 144 (285)
T cd05632 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999995 898888754455689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 Dfg~~~ 150 (285)
T cd05632 145 DLGLAV 150 (285)
T ss_pred cCCcce
Confidence 999987
No 153
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2.3e-30 Score=273.12 Aligned_cols=145 Identities=22% Similarity=0.301 Sum_probs=122.3
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HP 177 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-Hp 177 (1620)
.+...++|++++++|+|.|++||.|.+ ..+.+.++||++++-+.. ... ||++||+.|+ ||
T Consensus 33 ~wg~~ddYeivrk~GRGKYSEVFeg~~------~~~~eK~ViKiLKPVkkk-----KIk--------REikIL~nL~gg~ 93 (338)
T KOG0668|consen 33 DWGNQDDYEIVRKVGRGKYSEVFEGIN------ITNNEKCVIKILKPVKKK-----KIK--------REIKILQNLRGGP 93 (338)
T ss_pred eccccchHHHHHHHcCccHhhHhcccc------cCCCceEEEeeechHHHH-----HHH--------HHHHHHHhccCCC
Confidence 344578999999999999999999885 345677888888763321 222 9999999997 99
Q ss_pred cccceeeEEEeCC--EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 178 NVAPVLGLLKTSG--LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 178 NIv~l~~~~~~~~--~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
|||+|+++..++. ...||+||.+. |...+.. .++..+++++++|+++||.|||++||+|||+||.|+|||..
T Consensus 94 NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~ 168 (338)
T KOG0668|consen 94 NIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE 168 (338)
T ss_pred CeeehhhhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence 9999999998765 67899999996 5555443 57889999999999999999999999999999999999987
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
.. .++|+|.|+|.
T Consensus 169 ~r-kLrlIDWGLAE 181 (338)
T KOG0668|consen 169 LR-KLRLIDWGLAE 181 (338)
T ss_pred hc-eeeeeecchHh
Confidence 63 89999999998
No 154
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=1e-28 Score=290.42 Aligned_cols=147 Identities=24% Similarity=0.270 Sum_probs=129.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+. .++..+|+|++............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR------ETGETVALKKVALRRLEGGIPNQAL--------REIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC------CCCceEEEEEEEcccccchhhHHHH--------HHHHHHHhCCCCCCcceee
Confidence 5899999999999999999862 3578999999876543333333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++..++.+++||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~df 143 (286)
T cd07832 67 VFPHGSGFVLVMEYMPSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADF 143 (286)
T ss_pred EEecCCeeEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeee
Confidence 99999999999999977999999743 35689999999999999999999999999999999999999988 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 144 g~~~ 147 (286)
T cd07832 144 GLAR 147 (286)
T ss_pred eecc
Confidence 9987
No 155
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=1.3e-28 Score=291.70 Aligned_cols=148 Identities=20% Similarity=0.237 Sum_probs=127.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+|++.+.||+|+||.||+|.+. .+++.||+|.+....... ....... .+|+++++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~~-------~~e~~~l~~~~h~~i~~~ 67 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK------ETGRIVAIKKIKLGERKEAKDGINFTA-------LREIKLLQELKHPNIIGL 67 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC------CCCcEEEEEEEeccccccccchhhHHH-------HHHHHHHhhcCCCCChhh
Confidence 5888999999999999999862 357899999997654331 1111112 289999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+.+.+++||||+.++|.+++... ...+++..++.++.||++||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~ 144 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLA 144 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEc
Confidence 9999999999999999988999999842 23689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 dfg~~~ 150 (298)
T cd07841 145 DFGLAR 150 (298)
T ss_pred cceeee
Confidence 999987
No 156
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=7.4e-29 Score=291.56 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=129.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+.++.||+|+||.||+|.+. .+++.+|||.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC------CCCCEEEEEEccccccccccchHHH--------HHHHHHHhcCCCCCcchhh
Confidence 4889999999999999999862 3578999999865432222222333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++.+++..++||||++++|.+++...+...+++..++.++.|++.||+|||++|++||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~--~~~l~df 144 (284)
T cd07860 67 VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADF 144 (284)
T ss_pred hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEeec
Confidence 99999999999999998999999865667789999999999999999999999999999999999999999 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 145 g~~~ 148 (284)
T cd07860 145 GLAR 148 (284)
T ss_pred cchh
Confidence 9987
No 157
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=8.6e-29 Score=299.01 Aligned_cols=147 Identities=22% Similarity=0.364 Sum_probs=126.1
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .+++.||+|.+.... .......+. +|+.+++.++||||++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~niv~ 67 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHK------PTGVKVAIKKISPFE-HQTFCQRTL--------REIKILRRFKHENIIG 67 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEc------CCCCeEEEEEecccc-cchhHHHHH--------HHHHHHHhCCCCCcCc
Confidence 3578999999999999999999862 467899999986421 112223333 8999999999999999
Q ss_pred eeeEEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++...+ .+|+||||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~- 143 (336)
T cd07849 68 ILDIIRPPSFESFNDVYIVQELMETDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC- 143 (336)
T ss_pred hhheeecccccccceEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC-
Confidence 999876543 589999999999998886 45689999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 144 -~~kl~dfg~~~ 154 (336)
T cd07849 144 -DLKICDFGLAR 154 (336)
T ss_pred -CEEECccccee
Confidence 89999999987
No 158
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=2.7e-28 Score=282.13 Aligned_cols=148 Identities=24% Similarity=0.225 Sum_probs=127.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|++++.||+|+||.||++.+. .+++.+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR------TDGKQYVIKKLNLRNASRRERKAAE--------QEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc------CCCcEEEEEEEehhhcCHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 5899999999999999999862 3467899999876433333333343 8999999999999999999
Q ss_pred EEEeC-CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 185 LLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 185 ~~~~~-~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
.+... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~ 144 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVG 144 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEe
Confidence 88754 478999999984 999999854456689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 145 df~~~~ 150 (257)
T cd08223 145 DLGIAR 150 (257)
T ss_pred cccceE
Confidence 999987
No 159
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=301.78 Aligned_cols=200 Identities=18% Similarity=0.160 Sum_probs=164.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccE-EEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVL-GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~-vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+.....+.||+|+||+||++.. .|.. ||||++...........+|. +|+.+|.+++|||||++
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~--------~g~~~vavK~~~~~~~~~~~~~~f~--------~E~~il~~l~HpNIV~f 104 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKW--------RGTDVVAVKIISDPDFDDESRKAFR--------REASLLSRLRHPNIVQF 104 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEe--------CCceeEEEEEecchhcChHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 3455667799999999999883 4566 99999987655554444555 99999999999999999
Q ss_pred eeEEEeCC-EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG-IAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g-IiHRDLKP~NILl~~~~~~~l 259 (1620)
+|++..+. .++|||||++ |+|.+++....+..++...+..++.||++||.|||+++ ||||||||+|||++.++ .++
T Consensus 105 ~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~~ 183 (362)
T KOG0192|consen 105 YGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KTL 183 (362)
T ss_pred EEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CEE
Confidence 99999888 7999999999 69999998544678899999999999999999999999 99999999999999985 389
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc--ccccccccccccccccchHHHHhhhhcc
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
||+|||+++...... ...+...||..|||||++. ...|+.++|+|+.|.+. ||.++.-.+|
T Consensus 184 KI~DFGlsr~~~~~~-----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvl-WEl~t~~~Pf 246 (362)
T KOG0192|consen 184 KIADFGLSREKVISK-----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVL-WELLTGEIPF 246 (362)
T ss_pred EECCCccceeecccc-----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHH-HHHHHCCCCC
Confidence 999999998533211 0122245899999999999 66999999999999554 5555544333
No 160
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=1.8e-28 Score=289.55 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=129.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.||+|.+....... ....+. +|+++++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK------LTGQLVALKEIRLEHEEG-APFTAI--------REASLLKDLKHANIVTL 68 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc------CCCcEEEEEEEecccccC-CchhHH--------HHHHHHhhCCCcceeeE
Confidence 678999999999999999999862 356889999987543221 112222 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++.+++..++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~ 145 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLDTDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEEC
Confidence 9999999999999999999999998743 34678999999999999999999999999999999999999999 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 146 dfg~~~ 151 (291)
T cd07844 146 DFGLAR 151 (291)
T ss_pred cccccc
Confidence 999987
No 161
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.96 E-value=9.8e-28 Score=286.28 Aligned_cols=357 Identities=17% Similarity=0.204 Sum_probs=274.0
Q ss_pred hcccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc-eeEEeecccCcEEEEEEccCCCEEEEeccCCC
Q 000355 1216 EATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1292 (1620)
Q Consensus 1216 ~~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~-~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1292 (1620)
....++.||+..|.. |+..|.. |+|||.|+.|.+||+-++ -+..|+||.+.|+..-|..+.++++|.|.
T Consensus 98 ~~~~tfngHK~AVt~l~fd~~G~r-----laSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sK--- 169 (888)
T KOG0306|consen 98 EILITFNGHKAAVTTLKFDKIGTR-----LASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSK--- 169 (888)
T ss_pred ceeeeecccccceEEEEEcccCce-----EeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEecc---
Confidence 456788999999995 7777765 999999999999998744 67889999999999999998899999998
Q ss_pred CCcEEEEEeCCCCe------------------------------------------------------------------
Q 000355 1293 FKGTVQKWELTRIN------------------------------------------------------------------ 1306 (1620)
Q Consensus 1293 ~DgtVrLWdl~tg~------------------------------------------------------------------ 1306 (1620)
|+.|++||+++..
T Consensus 170 -Ds~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i 248 (888)
T KOG0306|consen 170 -DSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREI 248 (888)
T ss_pred -CceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCcee
Confidence 8999999973310
Q ss_pred --------------------------------------------------------------------------------
Q 000355 1307 -------------------------------------------------------------------------------- 1306 (1620)
Q Consensus 1307 -------------------------------------------------------------------------------- 1306 (1620)
T Consensus 249 ~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv 328 (888)
T KOG0306|consen 249 NLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDV 328 (888)
T ss_pred EEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEE
Confidence
Q ss_pred ------------------EE------------------EEEecCCcceeEEEEeeCCCeEEEe-CCcEEEEeCCCCceEE
Q 000355 1307 ------------------CV------------------SGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLS 1349 (1620)
Q Consensus 1307 ------------------~l------------------~~l~gH~~~V~sV~f~~~~~~laS~-DgtV~IWD~~tg~~i~ 1349 (1620)
+. -++.||...|.+++++.+...++|+ .+.++||+..+.+|++
T Consensus 329 ~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciR 408 (888)
T KOG0306|consen 329 TPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIR 408 (888)
T ss_pred EecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeE
Confidence 00 1234688889999988877777887 7899999999999999
Q ss_pred EEeccCCccccccCCCCCcccccccc----------cccc-cccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCc
Q 000355 1350 VFAEQSMDSLHGGSPSSSISKINTDQ----------VGML-NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1350 ~l~~~~~~~~~~~s~s~~~~~~~~~~----------~~~~-~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dgt 1418 (1620)
++.....- .....|.+...+..... ...+ ....|.+.++++ +.+||+..+++||.|.+
T Consensus 409 Ti~~~y~l-~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi----------~~~pD~~g~vT~saDkt 477 (888)
T KOG0306|consen 409 TITCGYIL-ASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSI----------SLSPDNKGFVTGSADKT 477 (888)
T ss_pred EeccccEE-EEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeee----------eecCCCCceEEecCCcE
Confidence 98754211 11111222111111111 1111 111345555544 45567999999999999
Q ss_pred EEEEECCC-----CceeEEeeC-CCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEE
Q 000355 1419 LRFIDINQ-----GQKLHLWRG-EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1492 (1620)
Q Consensus 1419 VrlwDl~t-----g~~l~~l~~-~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l 1492 (1620)
|++||..- |...+.+.- |.........|.|+.++ |||+++|+|--|++|++|=+.+-+..-++
T Consensus 478 VkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S-----------pdgk~LaVsLLdnTVkVyflDtlKFflsL 546 (888)
T KOG0306|consen 478 VKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS-----------PDGKLLAVSLLDNTVKVYFLDTLKFFLSL 546 (888)
T ss_pred EEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc-----------CCCcEEEEEeccCeEEEEEecceeeeeee
Confidence 99999742 222222222 22333456678888775 78899999999999999999999999999
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
-||.=||.|+. +||+++++|||.|++|+||-+.=| .+-..+-+|.++|.+ |-|+...+.|+|.|+ |+-||-.+
T Consensus 547 YGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k- 623 (888)
T KOG0306|consen 547 YGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK- 623 (888)
T ss_pred cccccceeEEeccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh-
Confidence 99999999999 999999999999999999998877 556688899999997 999999999999999 99999541
Q ss_pred CCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
. ...+++ .+|.+.|++++.+|+|.+++++|.|.+||+|
T Consensus 624 --F-----e~iq~L------~~H~~ev~cLav~~~G~~vvs~shD~sIRlw 661 (888)
T KOG0306|consen 624 --F-----EEIQKL------DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLW 661 (888)
T ss_pred --h-----hhheee------ccchheeeeeEEcCCCCeEEeccCCceeEee
Confidence 0 112222 2589999999999999999999999999999
No 162
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=2.9e-29 Score=282.59 Aligned_cols=276 Identities=18% Similarity=0.319 Sum_probs=230.9
Q ss_pred ceeccCCCCCCCCCCeEEEEcCCCCEEEEeCCC-ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC
Q 000355 1227 WFWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1305 (1620)
Q Consensus 1227 ~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~g-~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg 1305 (1620)
.+-.+.|+|+. |++|+..|...+|+... ..-..+++|..+|+++.|+++|.+++||+. ||.|++|+..-.
T Consensus 100 ~~v~WtPeGRR-----Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~----gG~iKyWqpnmn 170 (464)
T KOG0284|consen 100 NVVRWTPEGRR-----LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDK----GGMIKYWQPNMN 170 (464)
T ss_pred eeEEEcCCCce-----eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCC----CceEEecccchh
Confidence 33458999997 99999999999999752 233446789999999999999999999998 899999998643
Q ss_pred eEEEEEecCC-cceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccccccccc
Q 000355 1306 NCVSGYYGHE-EVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1382 (1620)
Q Consensus 1306 ~~l~~l~gH~-~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1382 (1620)
.++.+++|. ..|.+++|+|.+..+++| ||+|+|||....+....+.+|..+
T Consensus 171 -nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwd------------------------- 224 (464)
T KOG0284|consen 171 -NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWD------------------------- 224 (464)
T ss_pred -hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCC-------------------------
Confidence 344555555 999999999998888554 999999999988877777766422
Q ss_pred CCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcc
Q 000355 1383 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1462 (1620)
Q Consensus 1383 ~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~ 1462 (1620)
|.|++|+|....+++|+.|+.|++||.++|+|+.++.+|.. .|.++.|.
T Consensus 225 ---------------VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKn------tVl~~~f~---------- 273 (464)
T KOG0284|consen 225 ---------------VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKN------TVLAVKFN---------- 273 (464)
T ss_pred ---------------cceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccc------eEEEEEEc----------
Confidence 67888888899999999999999999999999998886554 47888875
Q ss_pred cCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eC-CCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC
Q 000355 1463 VASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1540 (1620)
Q Consensus 1463 ~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~ 1540 (1620)
++++||+++|.|..++++|+|+-+.+.++++|+..|++++ +| +..+|.||+.||.|..|.+....+ ....-.+|..
T Consensus 274 -~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p-~~~i~~AHd~ 351 (464)
T KOG0284|consen 274 -PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP-LGEIPPAHDG 351 (464)
T ss_pred -CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccccc-ccCCCccccc
Confidence 6678999999999999999999999999999999999999 66 566999999999999999984421 2223357888
Q ss_pred CEEE--EeecCCEEEEEeCCc-eEEEeccCCCC
Q 000355 1541 GISG--FSVWGQDVISISNNK-IGLSSLSKSAD 1570 (1620)
Q Consensus 1541 ~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~ 1570 (1620)
.|.+ +.|-|..|++|+.|+ +++|.-.++.+
T Consensus 352 ~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 352 EIWSLAYHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred ceeeeeccccceeEeecCCCcceeeeccCCCCC
Confidence 9985 889999999999999 99999765543
No 163
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=5e-27 Score=270.21 Aligned_cols=278 Identities=23% Similarity=0.407 Sum_probs=239.5
Q ss_pred cccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCc
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1295 (1620)
Q Consensus 1219 ~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1295 (1620)
.++.+|.+.|.+ ++|++.+ +++++.|+.+++|++. +.....+.+|...+.++.|+++++.+++++. |+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~-----l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~ 73 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKL-----LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS----DK 73 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCE-----EEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC----CC
Confidence 346689999986 8888876 9999999999999998 6678889999999999999999999999997 89
Q ss_pred EEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEE-Ee-CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccc
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA-SC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1296 tVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~la-S~-DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
.|++||+.+++.+..+.+|...|.+++|++++..++ +. ||.|++||+.+++....+..+.
T Consensus 74 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------------------ 135 (289)
T cd00200 74 TIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT------------------ 135 (289)
T ss_pred eEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCC------------------
Confidence 999999999888999999999999999999877774 33 9999999999888776665321
Q ss_pred cccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeC
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~ 1453 (1620)
..++++.+++++..+++++.|+.|++||+++++.+..+..+. ..+.+++++
T Consensus 136 ----------------------~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~- 186 (289)
T cd00200 136 ----------------------DWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT------GEVNSVAFS- 186 (289)
T ss_pred ----------------------CcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCc------cccceEEEC-
Confidence 125667777778888888889999999999998888877543 347778775
Q ss_pred CCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 000355 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1454 ~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1532 (1620)
++++.+++++.||.|++||+++++.+..+.+|...|.++. ++++.++++++.||.|++||+.++ ...
T Consensus 187 ----------~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~--~~~ 254 (289)
T cd00200 187 ----------PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG--ECV 254 (289)
T ss_pred ----------CCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc--eeE
Confidence 5567899999999999999999999999988999999999 888889999988999999999876 556
Q ss_pred eEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1533 TVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1533 ~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
..+.+|...|.+ |+++++.+++++.|+ |++|+
T Consensus 255 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 255 QTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 677889888885 888899999999999 99996
No 164
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=9.9e-29 Score=298.19 Aligned_cols=148 Identities=23% Similarity=0.353 Sum_probs=127.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.||+|++............+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDT------RSGKKVAIKKIPHAFDVPTLAKRTL--------RELKILRHFKHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEc------CCCCEEEEEEeccccccccchHHHH--------HHHHHHHhcCCCCccCH
Confidence 478999999999999999999862 4578999999876432222223333 89999999999999999
Q ss_pred eeEEEe----CCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 183 LGLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 183 ~~~~~~----~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++|.. ...+++||||+.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~ 145 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--E 145 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 998864 34789999999999999987 345689999999999999999999999999999999999999999 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 146 ~kl~dfg~~~ 155 (334)
T cd07855 146 LRIGDFGMAR 155 (334)
T ss_pred EEecccccce
Confidence 9999999987
No 165
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=2.2e-28 Score=292.02 Aligned_cols=151 Identities=19% Similarity=0.191 Sum_probs=127.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+|++.+.||+|+||.||+|.+.. ...+..+|+|.+.......... ... .+|+.+++.++||||++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~~i~~~~ 68 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN----GKDGKEYAIKKFKGDKEQYTGISQSA--------CREIALLRELKHENVVSLV 68 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC----CCCCCeEEEEEeccccccccCccHHH--------HHHHHHHHhcCCCCccceE
Confidence 58899999999999999999622 1257899999998743222221 222 2899999999999999999
Q ss_pred eEEEeC--CEEEEEEeCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC----C
Q 000355 184 GLLKTS--GLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD----S 254 (1620)
Q Consensus 184 ~~~~~~--~~~~lV~E~~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~----~ 254 (1620)
+++... +.+++||||++++|.+++.... ...+++..++.++.||+.||.|||+++|+||||||+|||++. +
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 69 EVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred EEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCcc
Confidence 999988 7899999999999988886422 236889999999999999999999999999999999999998 7
Q ss_pred CceEEEEeecCCccc
Q 000355 255 CWSWLYICDKPLVGF 269 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~ 269 (1620)
+ .+||+|||+++.
T Consensus 149 ~--~~kl~Dfg~~~~ 161 (316)
T cd07842 149 G--VVKIGDLGLARL 161 (316)
T ss_pred c--eEEECCCccccc
Confidence 7 899999999883
No 166
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=5.2e-29 Score=305.82 Aligned_cols=213 Identities=15% Similarity=0.173 Sum_probs=165.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. .+++.||||++.+.........+.++ +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK------DTGKIYAMKTLLKSEMFKKDQLAHVK-------AERDVLAESDSPWVVSLY 67 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhHHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999862 46789999998654322222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|.+++.+|+||||++ |+|.+++. ..+.+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~ 143 (377)
T cd05629 68 YSFQDAQYLYLIMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLS 143 (377)
T ss_pred EEEEcCCeeEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 59999997 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcc--------cCCCCCC----------------------------ccceecccccCccchhhhccccc
Q 000355 263 DKPLVGFNSIADWC--------TIPTSPM----------------------------IGCCIEGCSSQGLYADLKLSQSM 306 (1620)
Q Consensus 263 DFGla~~~~~~~~~--------~~~~~~~----------------------------~~~~~~~~~gt~~Y~APEv~~~~ 306 (1620)
|||+|+........ ....... .........||+.|||||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999732111000 0000000 00001124589999999999999
Q ss_pred ccccccccccccccchHHHHhhhhcccC
Q 000355 307 DWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 307 ~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
.|+.++|+|+.|++. |+++++..+|.+
T Consensus 224 ~~~~~~DiwSlGvil-~elltG~~Pf~~ 250 (377)
T cd05629 224 GYGQECDWWSLGAIM-FECLIGWPPFCS 250 (377)
T ss_pred CCCCceeeEecchhh-hhhhcCCCCCCC
Confidence 999999999999887 666665555443
No 167
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=281.03 Aligned_cols=184 Identities=19% Similarity=0.264 Sum_probs=140.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|.-++.+|.|+- .|-.|-|. -.++.||+|++..........+ ++.+|..++..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~------v~~~~v~ikk~~~pf~n~~~ak--------ra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQ------VLGRPVAIKKLSRPFQNQTHAK--------RAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchh------hccCceehhhhcCccccCccch--------hhhhhhhhhhhhcccceeee
Confidence 558999999999998 56555542 3468899998865433322222 34599999999999999999
Q ss_pred eeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 183 LGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 183 ~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+.+|.-.. .+|+|||+|..+|.+.+. -.+....++++++|+++|++|||+.||+||||||+||++..++
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~- 155 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC- 155 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-
Confidence 99997543 789999999999999987 2456778899999999999999999999999999999999999
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 319 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~ 319 (1620)
.+||.|||+|+..... ..++.+..|.+|+|||++.+..|.+.+|+|+.||
T Consensus 156 -~lKi~dfg~ar~e~~~------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGc 205 (369)
T KOG0665|consen 156 -TLKILDFGLARTEDTD------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 205 (369)
T ss_pred -heeeccchhhcccCcc------------cccCchhheeeccCchheeccCCcccchhhhhhh
Confidence 8999999999932110 1234455677788887765433333333333333
No 168
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=4e-28 Score=288.77 Aligned_cols=154 Identities=18% Similarity=0.190 Sum_probs=129.9
Q ss_pred cccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcc
Q 000355 98 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 177 (1620)
Q Consensus 98 ~~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~Hp 177 (1620)
......++|++.+.||+|+||.||+|.+. .+++.||||.+............. ++|+++++.++||
T Consensus 6 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~ 71 (310)
T cd07865 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHK------KTKQIVALKKVLMENEKEGFPITA--------LREIKILQLLKHE 71 (310)
T ss_pred cccchhhheEEEEEeecCCCEEEEEEEEC------CCCcEEEEEEEeccCCcCCchhHH--------HHHHHHHHhCCCC
Confidence 44556789999999999999999999862 367899999986543222211222 2899999999999
Q ss_pred cccceeeEEEeCC--------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 178 NVAPVLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 178 NIv~l~~~~~~~~--------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
||+++++++...+ ..++||||++++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus 72 ~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~ni 150 (310)
T cd07865 72 NVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANI 150 (310)
T ss_pred CccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 9999999987654 4699999999999998874 334689999999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcc
Q 000355 250 LLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~ 268 (1620)
|++.++ .+||+|||+++
T Consensus 151 l~~~~~--~~kl~dfg~~~ 167 (310)
T cd07865 151 LITKDG--ILKLADFGLAR 167 (310)
T ss_pred EECCCC--cEEECcCCCcc
Confidence 999998 89999999987
No 169
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=2.6e-28 Score=286.98 Aligned_cols=147 Identities=20% Similarity=0.286 Sum_probs=125.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|++. .+++.+|+|++..........+.+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR------ETGQIVAIKKFVESEDDPVIKKIAL--------REIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC------CCCcEEEEEEEeecccCccccHHHH--------HHHHHHHhCCCCCEeeee
Confidence 47999999999999999999862 3578999999875432222222233 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+.+++||||+++ .|..++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLC 142 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEEC
Confidence 999999999999999997 5555554 344689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 143 dfg~~~ 148 (286)
T cd07847 143 DFGFAR 148 (286)
T ss_pred ccccce
Confidence 999987
No 170
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=1.7e-28 Score=296.50 Aligned_cols=149 Identities=27% Similarity=0.393 Sum_probs=128.1
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...+|++.+.||+|+||.||+|++. .++..||||.+.............. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNS------ETNEKVAIKKIANAFDNRIDAKRTL--------REIKLLRHLDHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEec------CCCCeEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCccc
Confidence 3568999999999999999999862 4678999999875322222223333 8999999999999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 182 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
+++++... ..+|+||||++++|.+++. ..+.+++..++.++.|++.||.|||+++++||||||+|||++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~- 145 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMDTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC- 145 (337)
T ss_pred hHHheecccccccCcEEEEEeCCCCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-
Confidence 99988654 3589999999999999997 456789999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 146 -~~kL~Dfg~~~ 156 (337)
T cd07858 146 -DLKICDFGLAR 156 (337)
T ss_pred -CEEECcCcccc
Confidence 89999999987
No 171
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=5.4e-29 Score=304.03 Aligned_cols=215 Identities=14% Similarity=0.165 Sum_probs=169.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||+||+|.+. .+++.+|+|++.+...........++ +|+.++..++||||++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK------DTGHVYAMKILRKADMLEKEQVGHIR-------AERDILVEADSLWVVKMF 67 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999862 45789999999764322222222232 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+.+.+|+||||++| +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~ 143 (363)
T cd05628 68 YSFQDKLNLYLIMEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLS 143 (363)
T ss_pred EEEecCCeEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEe
Confidence 999999999999999985 9999998 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCccc--------CCC---------CC-------CccceecccccCccchhhhccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCT--------IPT---------SP-------MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 263 DFGla~~~~~~~~~~--------~~~---------~~-------~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
|||+++......... ... .. ..........||+.|||||++.+..|+.++|+|+.|
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 999998532211000 000 00 000001234579999999999999999999999999
Q ss_pred ccchHHHHhhhhcccCCC
Q 000355 319 ELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 319 ~isnfeyL~~ln~~~gRs 336 (1620)
++. |+++++..+|.+.+
T Consensus 224 vil-~ell~G~~Pf~~~~ 240 (363)
T cd05628 224 VIM-YEMLIGYPPFCSET 240 (363)
T ss_pred HHH-HHHHhCCCCCCCCC
Confidence 887 77777766665544
No 172
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.96 E-value=5.8e-28 Score=278.98 Aligned_cols=148 Identities=20% Similarity=0.193 Sum_probs=130.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+. .+++.+++|.+............+. +|+++++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK------ADKRVYAMKQIDLSKMNRREREEAI--------DEARVLAKLDSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc------CCCcEEEEEEeehhhCCHHHHHHHH--------HHHHHHHhcCCCCeehhee
Confidence 4888999999999999999862 4578999999876444444444444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++..|+||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~d 144 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGD 144 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcc
Confidence 99999999999999985 999999865456788999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 145 f~~~~ 149 (256)
T cd08529 145 LGVAK 149 (256)
T ss_pred cccce
Confidence 99987
No 173
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=8.9e-29 Score=304.27 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=168.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||+|+||.||+|++. .+++.+|+|.+...........+.+. +|+++++.++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV------DTKALYAMKTLRKKDVLLRNQVAHVK-------AERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC------CCCCEEEEEEEeHHHhhhHHHHHHHH-------HHHHHHHhCCCCcCCeEEE
Confidence 6899999999999999999862 45789999998754322222222222 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.|.+++.+|+|||||+| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~D 144 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeE
Confidence 99999999999999985 9999997 345789999999999999999999999999999999999999999 899999
Q ss_pred cCCcccCCCCCccc--C--------------C--------------------CCCCccceecccccCccchhhhcccccc
Q 000355 264 KPLVGFNSIADWCT--I--------------P--------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 307 (1620)
Q Consensus 264 FGla~~~~~~~~~~--~--------------~--------------------~~~~~~~~~~~~~gt~~Y~APEv~~~~~ 307 (1620)
||+|+......... . . ......+......||+.|||||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 99986321100000 0 0 0000001112345899999999999999
Q ss_pred cccccccccccccchHHHHhhhhcccCCC
Q 000355 308 WHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 308 y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|+.++|+|+.|++. |+++++..+|.+++
T Consensus 225 ~~~~~DiwSlGvil-~elltG~~Pf~~~~ 252 (382)
T cd05625 225 YTQLCDWWSVGVIL-YEMLVGQPPFLAQT 252 (382)
T ss_pred CCCeeeEEechHHH-HHHHhCCCCCCCCC
Confidence 99999999999887 77777776666554
No 174
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96 E-value=5e-28 Score=288.70 Aligned_cols=146 Identities=17% Similarity=0.233 Sum_probs=126.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++.+. .++..+|+|.+... .......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHR------PSGLIMARKLIHLE-IKPAIRNQII--------RELKVLHECNSPYIVGFY 65 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEc------CCCeEEEEEEeccc-cCHHHHHHHH--------HHHHHHHhCCCCCCCeEE
Confidence 46999999999999999999862 45688999998653 2222223344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++|..++.+++||||++| +|.++++. .+.+++..++.++.|++.||.|||+ ++|+||||||+|||++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l 141 (308)
T cd06615 66 GAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKL 141 (308)
T ss_pred EEEeeCCEEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEE
Confidence 999999999999999985 99999983 4668899999999999999999998 6999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 142 ~dfg~~~ 148 (308)
T cd06615 142 CDFGVSG 148 (308)
T ss_pred ccCCCcc
Confidence 9999886
No 175
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=5.5e-28 Score=285.60 Aligned_cols=147 Identities=23% Similarity=0.284 Sum_probs=128.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||++.+. .+++.+|+|.+......... ...+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHK------GSGKYYALKILSKAKIVKLKQVEHVL--------NEKRILQSIRHPFLVNL 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCccce
Confidence 47999999999999999999862 35789999998754332222 22333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||++ ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 142 (290)
T cd05580 67 YGSFQDDSNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKI 142 (290)
T ss_pred eeEEEcCCeEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEE
Confidence 999999999999999996 699999983 46789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 143 ~dfg~~~ 149 (290)
T cd05580 143 TDFGFAK 149 (290)
T ss_pred eeCCCcc
Confidence 9999987
No 176
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=2.2e-28 Score=289.14 Aligned_cols=150 Identities=25% Similarity=0.243 Sum_probs=129.2
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .+++.+|+|.++...........+. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDK------KTGEIVALKKLKMEKEKEGFPITSL--------REINILLKLQHPNIVT 68 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEEC------CCCcEEEEEEEeeccccccchhhHH--------HHHHHHHhcCCCCEEE
Confidence 3568999999999999999999862 3578899999976433322122223 8999999999999999
Q ss_pred eeeEEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 182 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 182 l~~~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++... +..|+||||++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--IL 145 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cE
Confidence 99999887 899999999999999998743 34689999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 146 ~l~d~g~~~ 154 (293)
T cd07843 146 KICDFGLAR 154 (293)
T ss_pred EEeecCcee
Confidence 999999887
No 177
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=278.52 Aligned_cols=212 Identities=17% Similarity=0.217 Sum_probs=173.2
Q ss_pred CCCeee-eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~-~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.+-|++ .+.||+|+||.|.-|.+ +.++..+|||++.+. ........ +||++++..+ .|+||+
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~------i~t~~EYAVKiidKq--~gHsR~Rv--------fREVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVS------IQTGKEYAVKIIDKQ--PGHSRSRV--------FREVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeee------eccchhhhhhhhhcC--CchHHHHH--------HHHHHHHHHhcCCccHH
Confidence 455665 58999999999998885 467899999999875 33322333 4999999888 499999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-eE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 258 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-~~ 258 (1620)
+|+++|++++.+|||||.|.| .|...|. +...++|.++..++++|+.||+|||.+||.||||||+|||-..... ..
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999995 9999998 5778999999999999999999999999999999999999865543 47
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-----ccccccccccccccccchHHHHhhhhccc
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-----~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
+|||||.++.........+..+++.. .+.| |+..|||||+.. ...|++.||.|+.|.|. |-+|.++.+|.
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L---~tPv-GSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl-YImLsGYpPFv 292 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPEL---LTPV-GSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL-YIMLSGYPPFV 292 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccc---cCcc-cchhhcchhHHhhhccccccccccccHHHHHHHH-HHHHhCCCCcc
Confidence 89999999876544444443444433 3344 467899999753 56799999999999988 88888888888
Q ss_pred CCCC
Q 000355 334 GRRW 337 (1620)
Q Consensus 334 gRs~ 337 (1620)
|+.-
T Consensus 293 G~Cg 296 (463)
T KOG0607|consen 293 GHCG 296 (463)
T ss_pred CccC
Confidence 8764
No 178
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=3.7e-28 Score=287.29 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=125.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .+++.||+|.+............+. +|+.+++.++ ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~lK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~~i~~~ 66 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK------NTGKLVALKKTRLEMDEEGIPPTAL--------REISLLQMLSESIYIVRL 66 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC------CCCcEEEEEeehhhccccCCchHHH--------HHHHHHHHccCCCCccce
Confidence 46999999999999999999862 4578999999866432222223333 8999999995 6999999
Q ss_pred eeEEEeCCE-----EEEEEeCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-
Q 000355 183 LGLLKTSGL-----ITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD- 253 (1620)
Q Consensus 183 ~~~~~~~~~-----~~lV~E~~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~- 253 (1620)
++++...+. .|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 67 LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC
Confidence 999987765 89999999999999887432 245799999999999999999999999999999999999998
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 147 ~~--~~kl~dfg~~~ 159 (295)
T cd07837 147 KG--LLKIADLGLGR 159 (295)
T ss_pred CC--eEEEeecccce
Confidence 66 89999999987
No 179
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3e-28 Score=273.86 Aligned_cols=283 Identities=18% Similarity=0.267 Sum_probs=232.5
Q ss_pred ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC---eEEEEEecCCcceeEEEEeeCCCeEEEe--C
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI---NCVSGYYGHEEVVNDICVLSSSGRIASC--D 1334 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg---~~l~~l~gH~~~V~sV~f~~~~~~laS~--D 1334 (1620)
...+.+..|++.|+-+.||++|++|||||. |.|+.+|++... +..+++.||..+|..|.|+|+++++.+| |
T Consensus 215 qt~qil~~htdEVWfl~FS~nGkyLAsaSk----D~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~ 290 (519)
T KOG0293|consen 215 QTWQILQDHTDEVWFLQFSHNGKYLASASK----DSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFD 290 (519)
T ss_pred hhhhhHhhCCCcEEEEEEcCCCeeEeeccC----CceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCch
Confidence 345778899999999999999999999998 899999997544 4478899999999999999999999655 8
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
..+++||+.+|.+...+.... +..+++.+|.|||..+++|+
T Consensus 291 e~~~lwDv~tgd~~~~y~~~~---------------------------------------~~S~~sc~W~pDg~~~V~Gs 331 (519)
T KOG0293|consen 291 EVLSLWDVDTGDLRHLYPSGL---------------------------------------GFSVSSCAWCPDGFRFVTGS 331 (519)
T ss_pred HheeeccCCcchhhhhcccCc---------------------------------------CCCcceeEEccCCceeEecC
Confidence 889999999999877664210 12267888889999999999
Q ss_pred CCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1415 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.|+++..||+. |+.+..|++... ..|.+++.. +||+++++.+.|..|++|+..+...+....
T Consensus 332 ~dr~i~~wdlD-gn~~~~W~gvr~-----~~v~dlait-----------~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis- 393 (519)
T KOG0293|consen 332 PDRTIIMWDLD-GNILGNWEGVRD-----PKVHDLAIT-----------YDGKYVLLVTVDKKIRLYNREARVDRGLIS- 393 (519)
T ss_pred CCCcEEEecCC-cchhhccccccc-----ceeEEEEEc-----------CCCcEEEEEecccceeeechhhhhhhcccc-
Confidence 99999999985 666777775432 346677664 678899999999999999998776654444
Q ss_pred cCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE----EEeecC-CEEEEEeCCc-eEEEeccC
Q 000355 1495 HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVWG-QDVISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1495 H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpdg-~~LaSgs~D~-I~vwdl~~ 1567 (1620)
-..+|+++. +.||+++++.=.+..|.+||++.. +.+..+.||+.+-. ||.-.. .+++|||.|+ |++|+..
T Consensus 394 e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~--~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~- 470 (519)
T KOG0293|consen 394 EEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN--KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI- 470 (519)
T ss_pred ccCceeEEEEcCCCcEEEEEcccCeeEEeecchh--hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc-
Confidence 457899999 999999999999999999999966 66678889987533 566544 7899999999 9999954
Q ss_pred CCCCCCcceeeccceeeecCCCCccccEEEEEEecCC-CEEEEEeCCCcEEEc
Q 000355 1568 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1568 ~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg-~lLasgs~DG~IrlW 1619 (1620)
.| ++..+.. ||...|++|+|+|.. .+||+||+||+||||
T Consensus 471 ----sg-------kll~~Ls--GHs~~vNcVswNP~~p~m~ASasDDgtIRIW 510 (519)
T KOG0293|consen 471 ----SG-------KLLAVLS--GHSKTVNCVSWNPADPEMFASASDDGTIRIW 510 (519)
T ss_pred ----CC-------ceeEeec--CCcceeeEEecCCCCHHHhhccCCCCeEEEe
Confidence 33 3333333 489999999999977 679999999999999
No 180
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.4e-27 Score=279.60 Aligned_cols=281 Identities=12% Similarity=0.167 Sum_probs=240.4
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
++..|+++|-+ ++|...| +.++=..|++.|||.+ +..++++.-..-+|++.+|-+--+.+++||. |+.
T Consensus 8 k~~~rSdRVKsVd~HPtePw-----~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsD----D~~ 78 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPW-----ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSD----DMQ 78 (794)
T ss_pred HhhccCCceeeeecCCCCce-----EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecC----Cce
Confidence 34458899986 8999999 8999999999999998 7789999999999999999999999999997 999
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCC-ceEEEEeccCCccccccCCCCCcccccc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg-~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
|||++..|++.+.+|..|.+.|.+|+.+|...++ +|.|.+|++||...+ .|.++|.+|.
T Consensus 79 IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~------------------ 140 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHE------------------ 140 (794)
T ss_pred EEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcc------------------
Confidence 9999999999999999999999999999999988 556999999998754 6788888764
Q ss_pred cccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeC
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~ 1453 (1620)
-.|.+++|.|+ |.+.++++|-|+||++|.+.+..+..++++|.. .|+||++-+
T Consensus 141 ------------HyVMqv~fnPk---------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHek------GVN~Vdyy~ 193 (794)
T KOG0276|consen 141 ------------HYVMQVAFNPK---------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEK------GVNCVDYYT 193 (794)
T ss_pred ------------eEEEEEEecCC---------CccceeeeeccccEEEEEcCCCCCceeeecccc------CcceEEecc
Confidence 34667777776 788999999999999999999999999997765 489999864
Q ss_pred CCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCC
Q 000355 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1532 (1620)
Q Consensus 1454 ~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1532 (1620)
.. +-.++++|++|.+|++||..|.+|++++.||..-|..+. +|.-.+++|||.||++|||+..+- +..
T Consensus 194 ~g---------dkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty--~lE 262 (794)
T KOG0276|consen 194 GG---------DKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY--KLE 262 (794)
T ss_pred CC---------CcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce--ehh
Confidence 32 235999999999999999999999999999999999999 999999999999999999998775 333
Q ss_pred eEeecCCCCEEEEe--ecCCEEEEEeCCceEEEec
Q 000355 1533 TVFKGHTNGISGFS--VWGQDVISISNNKIGLSSL 1565 (1620)
Q Consensus 1533 ~~l~gH~~~V~afS--pdg~~LaSgs~D~I~vwdl 1565 (1620)
.++.---..|.|+. ..+..++.|.+++..+..+
T Consensus 263 ~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~l 297 (794)
T KOG0276|consen 263 KTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKL 297 (794)
T ss_pred hhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEc
Confidence 45544456677765 5667788888777444443
No 181
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=6.1e-28 Score=280.84 Aligned_cols=149 Identities=17% Similarity=0.139 Sum_probs=125.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+ .++..+|+|.+...........+.... ..+|+++|+.++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-------~~~~~~avk~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-------NQGQLIAVKQVELDTSNVLAAEKEYEK----LQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-------cCCCeEEEEEeecCccchhhHHHHHHH----HHHHHHHHHhcCCCCEeeEee
Confidence 578899999999999999875 467889999987543222111111110 118999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++.+.+.+++||||++| +|.+++.. ...+++..+..++.|++.||.|||+.||+|+||||+||+++.++ .+||+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 145 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLID 145 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEecc
Confidence 99999999999999985 99999973 45678999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 146 fg~~~ 150 (265)
T cd06631 146 FGCAR 150 (265)
T ss_pred chhhH
Confidence 99987
No 182
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=4.1e-28 Score=287.03 Aligned_cols=150 Identities=19% Similarity=0.231 Sum_probs=127.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|++|.||+|.+. .+++.+|+|.+............+. +|+++++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR------VTNETIALKKIRLEQEDEGVPSTAI--------REISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec------CCCcEEEEEehhhccccccchHHHH--------HHHHHHHhccCCCEeeEE
Confidence 57999999999999999999862 3578899999865433222223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+++..++..|+||||++++|.+.+.......+++..++.++.||+.||+|||++||+||||||+||+++.++. .+||+|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~-~~kl~d 146 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-ALKLAD 146 (294)
T ss_pred EEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC-EEEEcc
Confidence 9999999999999999999999887544445688888999999999999999999999999999999986442 799999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 147 fg~~~ 151 (294)
T PLN00009 147 FGLAR 151 (294)
T ss_pred ccccc
Confidence 99987
No 183
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=3.5e-28 Score=289.45 Aligned_cols=149 Identities=23% Similarity=0.308 Sum_probs=126.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.+.............. +|+++++.++||||+++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQI------KTGRVVALKKILMHNEKDGFPITAL--------REIKILKKLKHPNVVPL 72 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCcchhHH--------HHHHHHHhcCCCCccch
Confidence 689999999999999999999862 4578899999865432222112222 89999999999999999
Q ss_pred eeEEEeC--------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 183 LGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 183 ~~~~~~~--------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++... ..+++||||++++|...+.. ....+++..++.++.||++||.|||++||+||||||+|||++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~ 151 (311)
T cd07866 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ 151 (311)
T ss_pred hhheecccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 9987543 35799999999999888863 34578999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||+++
T Consensus 152 ~--~~~l~dfg~~~ 163 (311)
T cd07866 152 G--ILKIADFGLAR 163 (311)
T ss_pred C--CEEECcCccch
Confidence 9 89999999998
No 184
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=9.6e-28 Score=287.02 Aligned_cols=150 Identities=25% Similarity=0.298 Sum_probs=131.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.+........ ....+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLK------GTGKLFALKVLDKKEMIKRNKVKRVL--------TEQEILATLDHPFLPTL 66 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEc------CCCcEEEEEEEeccccchHHHHHHHH--------HHHHHHHhCCCCCchhh
Confidence 37999999999999999999862 3578999999976543321 222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+..|+||||+.| +|.+++...+...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l 144 (316)
T cd05574 67 YASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIML 144 (316)
T ss_pred eeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEE
Confidence 9999999999999999985 999999865556789999999999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||++..
T Consensus 145 ~dfg~~~~ 152 (316)
T cd05574 145 SDFDLSKQ 152 (316)
T ss_pred eecchhhc
Confidence 99999984
No 185
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=1.2e-28 Score=303.10 Aligned_cols=211 Identities=16% Similarity=0.161 Sum_probs=166.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.|++++.||+|+||+||+|++. .+++.+|+|++.......... ..+. +|+.+|+.++||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~il~~l~h~~iv~l~ 67 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV------DTHALYAMKTLRKKDVLNRNQVAHVK--------AERDILAEADNEWVVKLY 67 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhcCCCCeeeeE
Confidence 5899999999999999999862 467899999997643332222 2333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+||||+.++ ++||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~ 143 (381)
T cd05626 68 YSFQDKDNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLT 143 (381)
T ss_pred EEEecCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEe
Confidence 999999999999999985 9999997 355689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCccc----------CC--------------------------CCCCccceecccccCccchhhhccccc
Q 000355 263 DKPLVGFNSIADWCT----------IP--------------------------TSPMIGCCIEGCSSQGLYADLKLSQSM 306 (1620)
Q Consensus 263 DFGla~~~~~~~~~~----------~~--------------------------~~~~~~~~~~~~~gt~~Y~APEv~~~~ 306 (1620)
|||+++......... .. ......+......||+.|||||++.+.
T Consensus 144 DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (381)
T cd05626 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK 223 (381)
T ss_pred eCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC
Confidence 999986321100000 00 000000111234689999999999999
Q ss_pred ccccccccccccccchHHHHhhhhcccC
Q 000355 307 DWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 307 ~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
.|+.++|+|+.|+|. |+++++..+|.+
T Consensus 224 ~~~~~~DiwSlG~il-~elltG~~Pf~~ 250 (381)
T cd05626 224 GYTQLCDWWSVGVIL-FEMLVGQPPFLA 250 (381)
T ss_pred CCCCccceeehhhHH-HHHHhCCCCCcC
Confidence 999999999999887 777766555543
No 186
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=5.5e-27 Score=252.80 Aligned_cols=277 Identities=16% Similarity=0.231 Sum_probs=221.7
Q ss_pred ccccccCCCceec--cCCC-CCCCCCCeEEEEcCCCCEEEEeCCC----ceeEEe-ecccCcEEEEEEccCCCEEEEecc
Q 000355 1218 TSNLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKA----SILSSI-RAHHGALRSVAVGQDECTVFTAGI 1289 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spd-g~~~~~~~lasgS~D~~i~lWd~~g----~~l~tl-~gH~~~V~svafspdg~~LaSgs~ 1289 (1620)
...+.||+++||. ++|. |.. |||||.|+.||+|+..+ .+...+ .+|+.+|++|+|+|.|++|++||
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~i-----lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aS- 80 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVI-----LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASAS- 80 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceE-----EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEee-
Confidence 3567899999985 7777 655 99999999999999883 244444 47999999999999999999999
Q ss_pred CCCCCcEEEEEeCCCC--eEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCC---ceEEEEeccCCcccccc
Q 000355 1290 GPGFKGTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG---KLLSVFAEQSMDSLHGG 1362 (1620)
Q Consensus 1290 d~~~DgtVrLWdl~tg--~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg---~~i~~l~~~~~~~~~~~ 1362 (1620)
||.++.||.-..+ +|+.++.||+..|.+|+|+.+|.+||+| |+.|-||.+..+ +|+..++.|..+
T Consensus 81 ---FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqD----- 152 (312)
T KOG0645|consen 81 ---FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQD----- 152 (312)
T ss_pred ---ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccc-----
Confidence 6999999986644 7899999999999999999999999766 999999998755 456667666433
Q ss_pred CCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECC---CCceeEEeeCCCcc
Q 000355 1363 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN---QGQKLHLWRGEPTE 1439 (1620)
Q Consensus 1363 s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~---tg~~l~~l~~~~~~ 1439 (1620)
|..+.|+|....|+++|.|++|++|+-. .-+++.++.+|..
T Consensus 153 -----------------------------------VK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~- 196 (312)
T KOG0645|consen 153 -----------------------------------VKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHEN- 196 (312)
T ss_pred -----------------------------------ccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccc-
Confidence 3445566668899999999999999876 2367888887654
Q ss_pred cccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE-ccCCcEEEEEeCCCCEEEEEeCCCc
Q 000355 1440 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLAAPEDHLLVSSSLDKT 1518 (1620)
Q Consensus 1440 v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~-gH~~~V~svaspdg~~LaSgS~Dgt 1518 (1620)
.|.+++|. +.|..+++++.|++|+||-..+. +. -|+..+..++.. ...++|++.|+.
T Consensus 197 -----TVW~~~F~-----------~~G~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr~~Y~v~W~-~~~IaS~ggD~~ 254 (312)
T KOG0645|consen 197 -----TVWSLAFD-----------NIGSRLVSCSDDGTVSIWRLYTD-----LSGMHSRALYDVPWD-NGVIASGGGDDA 254 (312)
T ss_pred -----eEEEEEec-----------CCCceEEEecCCcceEeeeeccC-----cchhcccceEeeeec-ccceEeccCCCE
Confidence 58888886 56679999999999999997632 22 378899999844 558999999999
Q ss_pred EEEEECCCCCCCCCe-----EeecCCCCEEE--Eeec-CCEEEEEeCCc-eEEEecc
Q 000355 1519 LRIWDLRRNWPSQPT-----VFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1519 I~IWDl~~~~~~~~~-----~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~ 1566 (1620)
|+++.-......... .-..|...|++ +.|. ...|++|++|| |++|.+.
T Consensus 255 i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 255 IRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 999987653211211 33468888886 7774 68899999999 9999864
No 187
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.6e-27 Score=287.27 Aligned_cols=320 Identities=18% Similarity=0.261 Sum_probs=250.8
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1308 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l 1308 (1620)
+|+|.-.| +.++=-.|.|++||.. +.++..+.+|.++|+.|+|+|++.+++|||. |-+|+||+.++.+|+
T Consensus 16 sFHP~rPw-----ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGD----DykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 16 SFHPKRPW-----ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD----DYKIKVWNYKTRRCL 86 (1202)
T ss_pred ecCCCCCE-----EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCC----ccEEEEEecccceeh
Confidence 48899999 9999999999999999 8999999999999999999999999999997 899999999999999
Q ss_pred EEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCC
Q 000355 1309 SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1386 (1620)
Q Consensus 1309 ~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~ 1386 (1620)
.++.||-+.|..+.|++.-..+ ||.|.||+||+..+++|+..+.+|.
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHn------------------------------- 135 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHN------------------------------- 135 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCc-------------------------------
Confidence 9999999999999999998888 5669999999999999999999874
Q ss_pred CeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE-----------------eeCCCcc------cccC
Q 000355 1387 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-----------------WRGEPTE------LGFP 1443 (1620)
Q Consensus 1387 ~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~-----------------l~~~~~~------v~~~ 1443 (1620)
+.|.|..|+|....++++|-|.+||+||+.--+..+. +-+.... .+|.
T Consensus 136 ---------HYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 136 ---------HYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred ---------eEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 3477777888899999999999999999853211000 0010000 1455
Q ss_pred CccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc--EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEE
Q 000355 1444 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLR 1520 (1620)
Q Consensus 1444 ~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~ 1520 (1620)
..|+-++|.|.. .+|++|++|..|++|.....+ .+.+.+||.+.|.++- +|...+++|.|.|++|+
T Consensus 207 RGVNwaAfhpTl-----------pliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksir 275 (1202)
T KOG0292|consen 207 RGVNWAAFHPTL-----------PLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIR 275 (1202)
T ss_pred cccceEEecCCc-----------ceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEE
Confidence 668888887544 489999999999999987554 4667789999999999 99999999999999999
Q ss_pred EEECCCCCCCCCeEeecCCC--CEEEEeecCCEEEEEeCCceEEEeccCCCC---CCCcc--eeeccceee---------
Q 000355 1521 IWDLRRNWPSQPTVFKGHTN--GISGFSVWGQDVISISNNKIGLSSLSKSAD---EDGQH--RLVPQKLYM--------- 1584 (1620)
Q Consensus 1521 IWDl~~~~~~~~~~l~gH~~--~V~afSpdg~~LaSgs~D~I~vwdl~~~~~---~~g~~--~~~~~kl~~--------- 1584 (1620)
+||+... ..+.+++...+ ++.+..|..++++.|-+.|+.||.+++.-. ..+.. .+....++.
T Consensus 276 VwDm~kR--t~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~t~~d~ 353 (1202)
T KOG0292|consen 276 VWDMTKR--TSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLRTQKDT 353 (1202)
T ss_pred EEecccc--cceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeeccccccc
Confidence 9999887 55667755444 455788889999998888888888763211 11111 011111111
Q ss_pred ----ecCCCCccccEEEEEEecCCCEEEEEe
Q 000355 1585 ----VDNGAKNLSVLSSISILPFSRLFLVGT 1611 (1620)
Q Consensus 1585 ----~~~g~~h~~~V~svafsPdg~lLasgs 1611 (1620)
...+.....++.+++++|....+..++
T Consensus 354 ~v~~lr~~g~~~~~~~smsYNpae~~vlics 384 (1202)
T KOG0292|consen 354 AVASLRRPGTLWQPPRSLSYNPAENAVLICS 384 (1202)
T ss_pred eeEeccCCCcccCCcceeeeccccCeEEEEe
Confidence 111111235788999999887766664
No 188
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=7.1e-28 Score=281.24 Aligned_cols=148 Identities=15% Similarity=0.192 Sum_probs=126.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.+.|++.+.||+|+||.||+|.+. .+++.+|+|.+..... ....+. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTGD---EEEEIK--------QEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEc------CCCcEEEEEEEEcCCc---cHHHHH--------HHHHHHHHhcCCCCeee
Confidence 457888999999999999999862 4578999999865322 122333 899999988 6999999
Q ss_pred eeeEEEeC------CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 182 VLGLLKTS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 182 l~~~~~~~------~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+++++... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~ 147 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC
Confidence 99998753 468999999985 99999986555678999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCccc
Q 000355 255 CWSWLYICDKPLVGF 269 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~ 269 (1620)
+ .+||+|||+++.
T Consensus 148 ~--~~~l~Dfg~~~~ 160 (272)
T cd06637 148 A--EVKLVDFGVSAQ 160 (272)
T ss_pred C--CEEEccCCCcee
Confidence 8 899999999873
No 189
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=1.4e-28 Score=301.78 Aligned_cols=214 Identities=15% Similarity=0.175 Sum_probs=166.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++++.||+|+||.||+|++. .+++.+|+|.+.+...........+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~------~~~~~~avK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKV------DTNALYAMKTLRKADVLMRNQAAHVK-------AERDILAEADNEWVVKLY 67 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEcHHHHHhhhhHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 37999999999999999999962 45789999998653222222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.|.+++.+|+||||++ |+|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~ 143 (376)
T cd05598 68 YSFQDKDNLYFVMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLT 143 (376)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEE
Confidence 99999999999999998 59999997 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCccc------------CCC--------------------CCCccceecccccCccchhhhccccccccc
Q 000355 263 DKPLVGFNSIADWCT------------IPT--------------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHS 310 (1620)
Q Consensus 263 DFGla~~~~~~~~~~------------~~~--------------------~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~ 310 (1620)
|||+|.......... ... .....+......||+.|||||++.+..|+.
T Consensus 144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 223 (376)
T cd05598 144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223 (376)
T ss_pred eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence 999985321100000 000 000001112346899999999999999999
Q ss_pred ccccccccccchHHHHhhhhcccCC
Q 000355 311 QFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 311 ~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
++|+|+.|++. |+++++..+|.+.
T Consensus 224 ~~DiwSlGvil-yell~G~~Pf~~~ 247 (376)
T cd05598 224 LCDWWSVGVIL-YEMLVGQPPFLAD 247 (376)
T ss_pred ceeeeecccee-eehhhCCCCCCCC
Confidence 99999999887 6666655555443
No 190
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=4.3e-28 Score=293.72 Aligned_cols=146 Identities=25% Similarity=0.298 Sum_probs=124.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+. .+++.||+|.+..... ...+.+. +|+++++.++||||+++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~------~~~~~v~iK~i~~~~~--~~~~~~~--------~Ei~~l~~l~h~~i~~~ 67 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDS------DCDKRVAVKKIVLTDP--QSVKHAL--------REIKIIRRLDHDNIVKV 67 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEEC------CCCcEEEEEEEecCCC--chHHHHH--------HHHHHHHhcCCCcchhh
Confidence 578999999999999999999862 4678999999866432 2223333 89999999999999999
Q ss_pred eeEEEeC--------------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 000355 183 LGLLKTS--------------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 248 (1620)
Q Consensus 183 ~~~~~~~--------------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 248 (1620)
++++... ...|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N 144 (342)
T cd07854 68 YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 144 (342)
T ss_pred HhhhcccccccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 9877654 3589999999999998886 3468899999999999999999999999999999999
Q ss_pred eEecCCCceEEEEeecCCcc
Q 000355 249 VLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 249 ILl~~~~~~~lKL~DFGla~ 268 (1620)
|+++.++. .+||+|||+++
T Consensus 145 ili~~~~~-~~kl~dfg~~~ 163 (342)
T cd07854 145 VFINTEDL-VLKIGDFGLAR 163 (342)
T ss_pred EEEcCCCc-eEEECCcccce
Confidence 99985442 78999999987
No 191
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=1.4e-28 Score=300.55 Aligned_cols=211 Identities=16% Similarity=0.210 Sum_probs=165.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|++. .+++.||||++.............++ +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK------DTGHIYAMKKLRKSEMLEKEQVAHVR-------AERDILAEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceE
Confidence 47999999999999999999972 45789999999754322222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++|.+++.+|+||||++ |+|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~ 143 (364)
T cd05599 68 YSFQDENYLYLIMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLS 143 (364)
T ss_pred EEEEcCCeEEEEECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEe
Confidence 99999999999999998 49999997 355789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccC---CC------------CCC------------ccceecccccCccchhhhcccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTI---PT------------SPM------------IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRW 315 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~---~~------------~~~------------~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W 315 (1620)
|||+++.......... .. .+. .........||+.|||||++.+..|+.++|+|
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 9999975322110000 00 000 00011123579999999999999999999999
Q ss_pred cccccchHHHHhhhhcc
Q 000355 316 WRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 316 ~~G~isnfeyL~~ln~~ 332 (1620)
+.|++. |+++++..+|
T Consensus 224 SlG~il-~el~~G~~Pf 239 (364)
T cd05599 224 SLGVIM-YEMLVGYPPF 239 (364)
T ss_pred cchhHH-HHhhcCCCCC
Confidence 999876 6665544443
No 192
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=278.73 Aligned_cols=205 Identities=18% Similarity=0.157 Sum_probs=173.2
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.+++|+.++.||+|+||+|.+|+. ..+++.+|+|++++.-...++.... .+.|-++|+..+||.+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rE------Kat~k~YAiKIlkKeviiakdEVAH-------TlTE~RVL~~~~HPFLt~ 232 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCRE------KATGKLYAIKILKKEVIIAKDEVAH-------TLTENRVLQNCRHPFLTS 232 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEee------cccCceeehhhhhhhheeehHHhhh-------hhhHHHHHHhccCcHHHH
Confidence 578999999999999999999985 2568999999998865554433322 248999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
|...|++.+.+|+||||..| .|+-++. +...+++..+++|..+|+.||.|||+++||.||||.+|+|+|.+| ++|
T Consensus 233 LKYsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HIK 308 (516)
T KOG0690|consen 233 LKYSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HIK 308 (516)
T ss_pred hhhhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ceE
Confidence 99999999999999999995 9988887 577899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
|+|||+++........ ..+.| |||.|.|||++....|+.++|+|..|.+. ||++++.-+|..+
T Consensus 309 itDFGLCKE~I~~g~t----------~kTFC-GTPEYLAPEVleDnDYgraVDWWG~GVVM-YEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 309 ITDFGLCKEEIKYGDT----------TKTFC-GTPEYLAPEVLEDNDYGRAVDWWGVGVVM-YEMMCGRLPFYNK 371 (516)
T ss_pred eeecccchhcccccce----------ecccc-CChhhcCchhhccccccceeehhhhhHHH-HHHHhccCccccc
Confidence 9999999943322111 12344 59999999999999999999999999765 7766655554443
No 193
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1e-27 Score=284.40 Aligned_cols=149 Identities=14% Similarity=0.114 Sum_probs=129.2
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
......+|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++|||
T Consensus 15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ 78 (296)
T cd06654 15 VGDPKKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPN 78 (296)
T ss_pred cCCcccceeeEEEecCCCCeEEEEEEEC------CCCcEEEEEEEecCCcc--hHHHHH--------HHHHHHHhCCCCC
Confidence 3344679999999999999999999862 45788999998764332 223333 8999999999999
Q ss_pred ccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|+++++.+..+...|+||||+++ +|.+++. ...+++.++..++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-- 153 (296)
T cd06654 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-- 153 (296)
T ss_pred EeeEEEEEEeCCEEEEeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--
Confidence 99999999999999999999985 9999986 34578899999999999999999999999999999999999998
Q ss_pred EEEEeecCCcc
Q 000355 258 WLYICDKPLVG 268 (1620)
Q Consensus 258 ~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 154 ~~kl~dfg~~~ 164 (296)
T cd06654 154 SVKLTDFGFCA 164 (296)
T ss_pred CEEECccccch
Confidence 89999999987
No 194
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=5.5e-28 Score=283.72 Aligned_cols=147 Identities=19% Similarity=0.213 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||++.+. .++..+|+|.+... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK------ETGLFAAAKIIQIE--SEEELEDFM--------VEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc------CCCcEEEEEEEeeC--CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 467999999999999999999862 35788999998653 223334454 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++.+|+||||+++ +|.+++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l 144 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKL 144 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEE
Confidence 9999999999999999996 99998874 245689999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 145 ~d~g~~~ 151 (280)
T cd06611 145 ADFGVSA 151 (280)
T ss_pred ccCccch
Confidence 9999877
No 195
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=1.1e-27 Score=277.10 Aligned_cols=148 Identities=20% Similarity=0.168 Sum_probs=129.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .+++.+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK------EDGKQYVIKEINISKMSPKEREESR--------KEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc------CCCCEEEEEEEEhHhCChHHHHHHH--------HHHHHHHhCCCCCeeeeEe
Confidence 5899999999999999999862 4578899999875433333334444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+..++||||+.+ +|.+++.......+++..+..++.|++.||.|||++|++|+||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d 144 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGD 144 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEee
Confidence 99999999999999985 999999754445678999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||++.
T Consensus 145 ~~~~~ 149 (256)
T cd08218 145 FGIAR 149 (256)
T ss_pred cccee
Confidence 99887
No 196
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=1.1e-27 Score=281.64 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=125.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|++.+.||+|+||.||++.+. .++..+++|.+... .......+. +|+++++.++||||+++++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~ii~~~~ 69 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNK------ETGVLAAAKVIDTK--SEEELEDYM--------VEIDILASCDHPNIVKLLD 69 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEEC------CCCeEEEEEEeCCC--CHHHHHHHH--------HHHHHHHHCCCCCeeeEEE
Confidence 4788899999999999999862 35678899998653 233344444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++..++||||+++ +|..++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 70 ~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~d 146 (282)
T cd06643 70 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLAD 146 (282)
T ss_pred EEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEcc
Confidence 99999999999999995 88777763 345689999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 147 fg~~~ 151 (282)
T cd06643 147 FGVSA 151 (282)
T ss_pred ccccc
Confidence 99987
No 197
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=1.6e-27 Score=275.78 Aligned_cols=148 Identities=22% Similarity=0.283 Sum_probs=131.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+.++.||+|+||.||.+++. .++..+++|.+...........++. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT------EDDSLVVWKEVNLTRLSEKERRDAL--------NEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEc------CCCcEEEEEEEeecccchhHHHHHH--------HHHHHHHhCCCCCeeEEEe
Confidence 5899999999999999998862 4678899999876544444444555 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++.+.+.+++||||+++ +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d 144 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGD 144 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECc
Confidence 99999999999999985 999999854456689999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 145 ~~~~~ 149 (256)
T cd08221 145 FGISK 149 (256)
T ss_pred CcceE
Confidence 99987
No 198
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=8.2e-28 Score=279.89 Aligned_cols=147 Identities=18% Similarity=0.191 Sum_probs=125.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh----HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
+|+..+.||+|+||.||++.+ ..+++.+|+|.+......... ...+. +|+++++.++||||+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~------~~~~~~~alk~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv 66 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARD------VKTGTLMAVKQVTYVRNTSSEQEEVVEALR--------KEIRLMARLNHPHII 66 (268)
T ss_pred CccccceecCcCceEEEEEEE------cCCCcEEEEEEeecccCCchhHHHHHHHHH--------HHHHHHHHcCCCcee
Confidence 478889999999999999986 245788999998754322211 22233 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++...+.+++||||++| +|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||+++.++. .+
T Consensus 67 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-~~ 143 (268)
T cd06630 67 RMLGATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RL 143 (268)
T ss_pred hhhceeccCCeEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EE
Confidence 999999999999999999995 99999973 456889999999999999999999999999999999999987752 69
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 144 ~l~dfg~~~ 152 (268)
T cd06630 144 RIADFGAAA 152 (268)
T ss_pred EEccccccc
Confidence 999999987
No 199
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96 E-value=9.1e-28 Score=282.08 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=122.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. .+++.+|+|.+.... .......+. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHL------LTRRILAVKVIPLDI-TVELQKQIM--------SELEILYKCDSPYIIGFY 65 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEc------CCCcEEEEEEEecCC-ChHHHHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 36888999999999999999862 457889999987542 222333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+..++..++||||+++ +|..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~ 137 (279)
T cd06619 66 GAFFVENRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLC 137 (279)
T ss_pred EEEEECCEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999996 66433 2357888999999999999999999999999999999999999 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 138 dfg~~~ 143 (279)
T cd06619 138 DFGVST 143 (279)
T ss_pred eCCcce
Confidence 999987
No 200
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.9e-29 Score=299.19 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=179.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
+++|..++.+|+|+||.+++++++ .+...+++|.+...+......+... +|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk------~~~~~~vlK~I~l~~~t~~~r~~A~--------~E~~lis~~~hP~iv~y 68 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK------SDDKLYVLKKINLEKLTEPERRSAI--------QEMDLLSKLLHPNIVEY 68 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc------cCCceEEEEEEeccccCchhhHHHH--------HHHHHHHhccCCCeeee
Confidence 678999999999999999998862 3456899999998776665544444 89999999999999999
Q ss_pred eeEEEeCCE-EEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~-~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++.|..++. ++|||+||+| +|.+.|...++..+++..+..|+.|++.|+.|||+++|+|||||+.||+++.++ .||
T Consensus 69 ~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~Vk 146 (426)
T KOG0589|consen 69 KDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVK 146 (426)
T ss_pred ccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--cee
Confidence 999999887 9999999995 999999977777899999999999999999999999999999999999999999 789
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|.|||+|+...... .....++|||.||.||++.+.+|+.+.|+|+.||+. ||++..-..|.+-.
T Consensus 147 LgDfGlaK~l~~~~-----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~-yEm~~lk~aF~a~~ 210 (426)
T KOG0589|consen 147 LGDFGLAKILNPED-----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL-YEMCTLKPAFKASN 210 (426)
T ss_pred ecchhhhhhcCCch-----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchH-HHHHhcccccCccc
Confidence 99999999643221 123456799999999999999999999999999998 88888777766543
No 201
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96 E-value=1.3e-27 Score=282.71 Aligned_cols=147 Identities=22% Similarity=0.268 Sum_probs=127.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.+.|++++.||.|+||.||+|.+. .++..+++|.+... .......+. +|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNK------ETGALAAAKVIETK--SEEELEDYM--------VEIEILATCNHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEEC------CCCceEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCcEeee
Confidence 467999999999999999999862 35788999998653 333344444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+..++.+|+||||++| +|..++.. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl 151 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKL 151 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEE
Confidence 9999999999999999996 78777753 345689999999999999999999999999999999999999888 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 152 ~dfg~~~ 158 (292)
T cd06644 152 ADFGVSA 158 (292)
T ss_pred ccCccce
Confidence 9999887
No 202
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.96 E-value=1.5e-27 Score=277.77 Aligned_cols=150 Identities=21% Similarity=0.225 Sum_probs=125.9
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh---hHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+........ ...+..+. ..+|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~~ 70 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA------SSGELMAVKQVELPSVSASSKDRKRSMLDA----LAREIALLKELQHENIVQ 70 (267)
T ss_pred CccccceeecCCCeEEEEEEec------CCCcEEEEEEecCCCcccchhHHHHHHHHH----HHHHHHHHHhcCCCCeee
Confidence 4778899999999999999862 3467899998865433221 11111111 128999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++...+..++||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++|++||||||+||+++.++ .+|
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~ 146 (267)
T cd06628 71 YLGSSLDADHLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIK 146 (267)
T ss_pred EEEEEEeCCccEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEE
Confidence 99999999999999999985 9999997 346688999999999999999999999999999999999999998 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 147 l~dfg~~~ 154 (267)
T cd06628 147 ISDFGISK 154 (267)
T ss_pred ecccCCCc
Confidence 99999988
No 203
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=1e-27 Score=290.52 Aligned_cols=151 Identities=22% Similarity=0.287 Sum_probs=128.5
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.+...++|++++.||+|+||.||+|.+. .++..||||.+............+. +|+.+|+.++|||
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ 75 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDR------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMKHEN 75 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEEC------CCCcEEEEEEecccccchHHHHHHH--------HHHHHHHhcCCCC
Confidence 3445789999999999999999999862 4678999999865332222223333 8999999999999
Q ss_pred ccceeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 179 VAPVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 179 Iv~l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
|+++++++..+. .+++||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 76 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~ 152 (343)
T cd07880 76 VIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN 152 (343)
T ss_pred ccceeeeecCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 999999997654 469999999889998886 34689999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCcc
Q 000355 253 DSCWSWLYICDKPLVG 268 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~ 268 (1620)
.++ .+||+|||+++
T Consensus 153 ~~~--~~kl~dfg~~~ 166 (343)
T cd07880 153 EDC--ELKILDFGLAR 166 (343)
T ss_pred CCC--CEEEeeccccc
Confidence 998 89999999987
No 204
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=1.9e-27 Score=283.20 Aligned_cols=148 Identities=17% Similarity=0.179 Sum_probs=128.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||++.+. ..++.||+|.+......... ...+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 66 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHK------ETRQRFAMKKINKQNLILRNQIQQVF--------VERDILTFAENPFVVSM 66 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEEC------CCCcEEEEEEeehhhhhhHHHHHHHH--------HHHHHHHhCCCCCeeee
Confidence 36899999999999999999862 45688999998764322222 22333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+..++.+++||||++| +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l 142 (305)
T cd05609 67 FCSFETKRHLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKL 142 (305)
T ss_pred EEEEecCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEE
Confidence 9999999999999999985 99999973 45689999999999999999999999999999999999999998 8999
Q ss_pred eecCCccc
Q 000355 262 CDKPLVGF 269 (1620)
Q Consensus 262 ~DFGla~~ 269 (1620)
+|||+++.
T Consensus 143 ~dfg~~~~ 150 (305)
T cd05609 143 TDFGLSKI 150 (305)
T ss_pred eeCCCccc
Confidence 99999883
No 205
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.1e-27 Score=284.16 Aligned_cols=147 Identities=14% Similarity=0.127 Sum_probs=128.2
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
....+|++++.||+|+||.||+|.+ ..++..||+|.+...... ....+. +|+.+++.++||||+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~------~~~~~~vaiK~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~ 79 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAID------IATGQEVAIKQMNLQQQP--KKELII--------NEILVMRENKNPNIV 79 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEE------CCCCCEEEEEEEecCccc--hHHHHH--------HHHHHHHhCCCCCEe
Confidence 3457899999999999999999986 246789999998754322 222333 899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++..++..|+||||+++ +|.+++. ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~ 154 (297)
T cd06656 80 NYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SV 154 (297)
T ss_pred eEEEEEecCCEEEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CE
Confidence 999999999999999999985 9999986 34578899999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 155 ~l~Dfg~~~ 163 (297)
T cd06656 155 KLTDFGFCA 163 (297)
T ss_pred EECcCccce
Confidence 999999987
No 206
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=4e-28 Score=285.53 Aligned_cols=147 Identities=20% Similarity=0.302 Sum_probs=125.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. ..++.+|+|.+..........+.+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK------ETGQIVAIKKFLESEDDKMVKKIAM--------REIRMLKQLRHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC------CCCCEEEEEeHhhccCcchhhHHHH--------HHHHHHHhcCCcchhhHH
Confidence 46899999999999999999862 3478899999876433332223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..++..|+||||+++ .|..+.. ....+++..++.++.||+.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~ 142 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLC 142 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEE
Confidence 999999999999999997 6666555 234578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 143 dfg~~~ 148 (286)
T cd07846 143 DFGFAR 148 (286)
T ss_pred eeeeee
Confidence 999987
No 207
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96 E-value=1.7e-27 Score=277.49 Aligned_cols=146 Identities=17% Similarity=0.127 Sum_probs=124.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh---hHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|+..+.||+|+||.||+|.+. .++..+|+|.+........ ....+. +|+.+++.++||||++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 68 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDV------DTGRELAAKQVQFDPESPETSKEVSALE--------CEIQLLKNLQHERIVQ 68 (266)
T ss_pred CccccceecCCCCEEEEEEEEc------CCCcEEEEEEeecCcCCchhHHHHHHHH--------HHHHHHHHcCCCCeee
Confidence 6888999999999999999862 4578999999865432221 122222 8999999999999999
Q ss_pred eeeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 182 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++++... ..++++|||+++ +|.+++. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~ 144 (266)
T cd06651 69 YYGCLRDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--N 144 (266)
T ss_pred EEEEEEcCCCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--C
Confidence 99998763 578999999985 9999997 345688999999999999999999999999999999999999988 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 145 ~~l~dfg~~~ 154 (266)
T cd06651 145 VKLGDFGASK 154 (266)
T ss_pred EEEccCCCcc
Confidence 9999999987
No 208
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.95 E-value=2.6e-27 Score=273.53 Aligned_cols=149 Identities=21% Similarity=0.200 Sum_probs=129.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+..+.||+|+||.||+|.+. .++..+|+|.+............+. +|+++|+.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQ--------NECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEc------CCCcEEEEEEEeccccccHHHHHHH--------HHHHHHhhCCCCchhheee
Confidence 5899999999999999999862 3578899999876544444444444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+..++..++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~l~d 145 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM-VVKIGD 145 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcc
Confidence 99999999999999985 9999998544556899999999999999999999999999999999999986652 689999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 146 ~~~~~ 150 (256)
T cd08220 146 FGISK 150 (256)
T ss_pred CCCce
Confidence 99987
No 209
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=1.4e-27 Score=278.00 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=127.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|++...... ....+. +|+.+++.++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL------HTGELAAVKIIKLEPGD--DFSLIQ--------QEIFMVKECKHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC------CCCeEEEEEEEecCccc--hHHHHH--------HHHHHHHhcCCCCeeee
Confidence 568999999999999999999862 45789999998653221 222233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++.+++||||+++ +|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l 147 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKL 147 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999887 345689999999999999999999999999999999999999998 7999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 148 ~dfg~~~ 154 (267)
T cd06646 148 ADFGVAA 154 (267)
T ss_pred CcCccce
Confidence 9999987
No 210
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=8.2e-28 Score=280.10 Aligned_cols=146 Identities=19% Similarity=0.220 Sum_probs=128.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.++... ......+. +|+.+++.++||||+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~--~~~~~~~~--------~e~~~~~~l~h~~ii~~ 71 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNV------NTGELAAIKVIKLEP--GEDFAVVQ--------QEIIMMKDCKHSNIVAY 71 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEc------CCCcEEEEEEEecCc--hhHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 458999999999999999999862 457889999986532 12222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+.+|+||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l 147 (267)
T cd06645 72 FGSYLRRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKL 147 (267)
T ss_pred EEEEEeCCEEEEEEeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999987 456789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 148 ~dfg~~~ 154 (267)
T cd06645 148 ADFGVSA 154 (267)
T ss_pred Ccceeee
Confidence 9999987
No 211
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=1.6e-27 Score=288.97 Aligned_cols=150 Identities=23% Similarity=0.288 Sum_probs=127.5
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
+...++|++.+.||+|+||.||+|.+. .+++.||+|++............+. +|+.+++.++||||
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i 78 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENV 78 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEc------CCCeEEEEEEecCcchhhHHHHHHH--------HHHHHHHHcCCCcc
Confidence 445689999999999999999999862 4578999999876433322233333 89999999999999
Q ss_pred cceeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 180 APVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 180 v~l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
+++++++... ...|++++++.++|.++++ ...+++..++.++.||++||.|||++||+||||||+||+++.
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 79 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 155 (345)
T ss_pred cceeeeeeecccccccccEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC
Confidence 9999998653 3578999999889998886 335889999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 156 ~~--~~kl~dfg~~~ 168 (345)
T cd07877 156 DC--ELKILDFGLAR 168 (345)
T ss_pred CC--CEEEecccccc
Confidence 99 89999999987
No 212
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=1.3e-27 Score=280.41 Aligned_cols=144 Identities=23% Similarity=0.250 Sum_probs=123.2
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccceee
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 184 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l~~ 184 (1620)
|++.+.||+|+||.||+|.+. .++..+|+|.++....... .... ++|+.++.++. ||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~-~~~~--------~~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR------KTGKYYAIKCMKKHFKSLE-QVNN--------LREIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEEc------CCCcEEEEEEehhccCCch-hhhH--------HHHHHHHhhcCCCCCccceEE
Confidence 678899999999999999862 4578899999875422221 1222 27999998885 999999999
Q ss_pred EEEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 185 LLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 185 ~~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++.++ +.+++||||++++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||+++. + .+||+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~ 141 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLA 141 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEE
Confidence 99988 89999999999999998874 2356899999999999999999999999999999999999999 7 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 142 dfg~~~ 147 (282)
T cd07831 142 DFGSCR 147 (282)
T ss_pred eccccc
Confidence 999987
No 213
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=1.3e-27 Score=281.35 Aligned_cols=148 Identities=16% Similarity=0.205 Sum_probs=127.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. ..+..+|+|.+... .......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR------PTGVTMAMKEIRLE-LDESKFNQII--------MELDILHKAVSPYIVDFY 65 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc------CCCcEEEEEEeecc-cCHHHHHHHH--------HHHHHHHhcCCCcHHhhh
Confidence 46899999999999999999862 35789999998653 2223334444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+.+..++.+|+||||++| +|..++.... ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 143 (286)
T cd06622 66 GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVK 143 (286)
T ss_pred hheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEE
Confidence 999999999999999996 9988887321 2368999999999999999999997 6999999999999999988 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 144 l~dfg~~~ 151 (286)
T cd06622 144 LCDFGVSG 151 (286)
T ss_pred EeecCCcc
Confidence 99999987
No 214
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=6.3e-28 Score=290.44 Aligned_cols=147 Identities=23% Similarity=0.352 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|++. ..+..+|+|.+..........+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK------RTGRKVAIKKISNVFDDLIDAKRIL--------REIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC------CCCcEEEEEeeccccccchhhhhHH--------HHHHHHHhcCCcchhhhhh
Confidence 5899999999999999999962 3478899999876432222233333 8999999999999999999
Q ss_pred EEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 185 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 185 ~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++...+ .+|+||||++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~--~~ 142 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DL 142 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 998775 899999999999999997 345789999999999999999999999999999999999999998 89
Q ss_pred EEeecCCccc
Q 000355 260 YICDKPLVGF 269 (1620)
Q Consensus 260 KL~DFGla~~ 269 (1620)
||+|||++..
T Consensus 143 ~L~dfg~~~~ 152 (330)
T cd07834 143 KICDFGLARG 152 (330)
T ss_pred EEcccCceEe
Confidence 9999999883
No 215
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.4e-29 Score=292.45 Aligned_cols=227 Identities=15% Similarity=0.162 Sum_probs=184.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
-|..++.||-|+||+|.+++. ..+...+|+|.+++...........++ .|-.||.+.+.+-||+||.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~K------vDT~~lYAmKTLrKaDVl~rnQvaHVK-------AERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRK------VDTRALYAMKTLRKADVLMRNQVAHVK-------AERDILAEADNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEee------cchhhHHHHhhhHHHHHHhhhhhhhhh-------hhhhhHhhcCCcceEEEEE
Confidence 588999999999999999884 345788999999875544444444444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.|++++.+|+||||++| |+..+|- +.+.|.|..+|+|+.++.+|+++.|..|+|||||||+|||||.+| +|||+|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeee
Confidence 99999999999999995 9998887 578899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCc------c------cCCC-------------------CCCccceecccccCccchhhhccccccccccc
Q 000355 264 KPLVGFNSIADW------C------TIPT-------------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQF 312 (1620)
Q Consensus 264 FGla~~~~~~~~------~------~~~~-------------------~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~ 312 (1620)
|||+........ . .... .....+.-....||+.|+|||++....|+..|
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 999973322110 0 0000 00011223456799999999999999999999
Q ss_pred ccccccccchHHHHhhhhcccCCCCCCCcCCcccceee
Q 000355 313 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 350 (1620)
Q Consensus 313 d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~ 350 (1620)
|+|+.|.|. ||+|.+-.+|-..+.. -+||-|.-|-.
T Consensus 853 dwws~gvil-~em~~g~~pf~~~tp~-~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 853 DWWSVGVIL-YEMLVGQPPFLADTPG-ETQYKVINWRN 888 (1034)
T ss_pred hhhHhhHHH-HHHhhCCCCccCCCCC-cceeeeeehhh
Confidence 999999887 8888777666555543 37888888864
No 216
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=2.6e-27 Score=285.56 Aligned_cols=148 Identities=20% Similarity=0.241 Sum_probs=123.3
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~ 183 (1620)
+|++.+.||+|+||.||++.+... ..+..+|+|.+............+. +|+.+++++ +||||++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAET----SEEETVAIKKITNVFSKKILAKRAL--------RELKLLRHFRGHKNITCLY 68 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCC----CcCceEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCChheee
Confidence 588999999999999999996221 2267899999865322222223333 899999999 599999999
Q ss_pred eEEEeC----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 184 GLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 184 ~~~~~~----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+.+... ..+|++|||++++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~e~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~--~~ 144 (332)
T cd07857 69 DMDIVFPGNFNELYLYEELMEADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--EL 144 (332)
T ss_pred eeeeeccccCCcEEEEEecccCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC--CE
Confidence 975433 4689999999999999997 456789999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 145 kl~Dfg~a~ 153 (332)
T cd07857 145 KICDFGLAR 153 (332)
T ss_pred EeCcCCCce
Confidence 999999998
No 217
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=1.6e-27 Score=280.19 Aligned_cols=147 Identities=22% Similarity=0.259 Sum_probs=128.0
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|++|.||+|.+. .+|..+|+|++............+. +|+++++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK------LTGEIVALKKIRLETEDEGVPSTAI--------REISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEc------CCCCEEEEEEeecccccccchhHHH--------HHHHHHHhcCCCCccCHhhe
Confidence 677899999999999999862 3678999999876433222223333 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 186 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+.+++..|+||||++++|.+++...+...+++..+..++.|++.||.|||+++++||||+|+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~--~~~l~df~ 144 (283)
T cd07835 67 VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG--ALKLADFG 144 (283)
T ss_pred eccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--cEEEeecc
Confidence 9999999999999999999999854445689999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
+++
T Consensus 145 ~~~ 147 (283)
T cd07835 145 LAR 147 (283)
T ss_pred ccc
Confidence 987
No 218
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.95 E-value=1.4e-27 Score=280.70 Aligned_cols=147 Identities=18% Similarity=0.218 Sum_probs=127.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|++|.||+|++. .++..+|+|.+...... .....+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR------TTGEIVALKEIHLDAEE-GTPSTAI--------REISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC------CCCeEEEEEEecccccc-cchHHHH--------HHHHHHHhhcCCCEeeeee
Confidence 5899999999999999999962 45789999998764321 1122233 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+..++||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||++++++ .+||+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~--~~~l~d 143 (284)
T cd07836 66 VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG--ELKLAD 143 (284)
T ss_pred eEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--cEEEee
Confidence 999999999999999999999887432 24589999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 144 ~g~~~ 148 (284)
T cd07836 144 FGLAR 148 (284)
T ss_pred cchhh
Confidence 99987
No 219
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95 E-value=1.9e-27 Score=279.22 Aligned_cols=148 Identities=21% Similarity=0.280 Sum_probs=125.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHh-hccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~i-L~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||++++. .+|+.||+|.++..... ....+++ .|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~iv~~ 65 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV------PTGTIMAVKRIRATVNS-QEQKRLL--------MDLDISMRSVDCPYTVTF 65 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc------CCCcEEEEEEEecCCCc-HHHHHHH--------HHHHHHHHHcCCCCeeee
Confidence 47899999999999999999862 46899999998764322 2223333 56654 666789999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++..++.+|+||||++|+|.+++... ....+++..+..++.||+.||.|||++ +++||||||+|||++.++ .+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~ 143 (283)
T cd06617 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QV 143 (283)
T ss_pred eEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CE
Confidence 9999999999999999999998888642 335689999999999999999999997 999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 144 kl~dfg~~~ 152 (283)
T cd06617 144 KLCDFGISG 152 (283)
T ss_pred EEeeccccc
Confidence 999999987
No 220
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=2.4e-27 Score=281.16 Aligned_cols=145 Identities=16% Similarity=0.156 Sum_probs=126.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||.|+||.||+|.+ ..+++.+|+|.+...... ....+. +|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~------~~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAID------VATGQEVAIKQINLQKQP--KKELII--------NEILVMKELKNPNIVNF 81 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEE------cCCCcEEEEEEEecccCc--hHHHHH--------HHHHHHHhcCCCceeee
Confidence 45799999999999999999986 246789999998653222 222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|+||||+++ +|.+++. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl 156 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKL 156 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9998886 33578999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 157 ~dfg~~~ 163 (296)
T cd06655 157 TDFGFCA 163 (296)
T ss_pred ccCccch
Confidence 9999987
No 221
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=1.8e-27 Score=287.33 Aligned_cols=157 Identities=16% Similarity=0.243 Sum_probs=128.0
Q ss_pred cCCCeee-eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh--HHHHHHhc--CCCcHhHHHhhccCCc
Q 000355 102 IMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLI--GVPSFDESSVPGCLRH 176 (1620)
Q Consensus 102 ~~~~y~~-~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~~~~~--~~~~~~Ei~iL~~l~H 176 (1620)
+.++|.. .+.||+|+||+||+|.+. ..++.||+|.+......... ..+..... ....++|+++++.++|
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 79 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDT------LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH 79 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEEC------CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC
Confidence 3567765 577999999999999862 35789999998654322100 00110000 0012489999999999
Q ss_pred ccccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 177 PNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 177 pNIv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
|||+++++++..++..++||||++|+|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~- 156 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG- 156 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC-
Confidence 99999999999999999999999999999997 355689999999999999999999999999999999999999998
Q ss_pred eEEEEeecCCcc
Q 000355 257 SWLYICDKPLVG 268 (1620)
Q Consensus 257 ~~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 157 -~~kl~dfg~~~ 167 (335)
T PTZ00024 157 -ICKIADFGLAR 167 (335)
T ss_pred -CEEECCcccee
Confidence 89999999987
No 222
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.95 E-value=3.7e-28 Score=297.18 Aligned_cols=205 Identities=17% Similarity=0.199 Sum_probs=165.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|++. .+++.+|+|.+.+...........+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHK------SSQKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCEeeE
Confidence 468999999999999999999962 45789999998753332222222232 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+++.+|+||||++ |+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL 183 (370)
T cd05621 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKL 183 (370)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEE
Confidence 999999999999999998 599999973 3578999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccc----cccccccccccccchHHHHhhhhcccCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~----y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
+|||+|+....... .......||+.|||||++.+.. |+.++|+|+.|++. |+++++..+|.+.+
T Consensus 184 ~DFG~a~~~~~~~~----------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~il-yell~G~~Pf~~~~ 251 (370)
T cd05621 184 ADFGTCMKMDETGM----------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-FEMLVGDTPFYADS 251 (370)
T ss_pred EecccceecccCCc----------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHH-HHHHhCCCCCCCCC
Confidence 99999984321110 0012234789999999987643 78899999999877 77776666665543
No 223
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=2.4e-27 Score=274.06 Aligned_cols=149 Identities=17% Similarity=0.135 Sum_probs=127.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK------SDSEHCVIKEIDLTKMPVKEKEASK--------KEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc------CCCceEEEEEeeHhhccchhhHHHH--------HHHHHHHhCCCCChhhhhh
Confidence 5889999999999999999862 3578899999876433333333333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+...+..++|+||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||++++++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d 145 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGD 145 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecc
Confidence 99999999999999985 9999997544456789999999999999999999999999999999999998862 579999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||.+.
T Consensus 146 ~~~~~ 150 (257)
T cd08225 146 FGIAR 150 (257)
T ss_pred cccch
Confidence 99887
No 224
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95 E-value=4.9e-28 Score=295.33 Aligned_cols=214 Identities=15% Similarity=0.170 Sum_probs=167.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++++.||+|+||.||+|.+. .+++.+|+|++.............++ +|+.++..++||||++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK------DTGHIYAMKILRKADMLEKEQVAHIR-------AERDILVEADGAWVVKMF 67 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 47899999999999999999862 45789999999753222222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+.+++.+|+||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||||+.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~ 143 (360)
T cd05627 68 YSFQDKRNLYLIMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLS 143 (360)
T ss_pred EEEEcCCEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999985 9999997 456789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccC----CCCC--------------------CccceecccccCccchhhhccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTI----PTSP--------------------MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~----~~~~--------------------~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
|||+++.......... ...+ ..........||+.|||||++.+..|+.++|+|+.|
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 9999974322110000 0000 000001123579999999999999999999999999
Q ss_pred ccchHHHHhhhhcccCC
Q 000355 319 ELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 319 ~isnfeyL~~ln~~~gR 335 (1620)
++. |+++++..+|.+.
T Consensus 224 vil-yel~tG~~Pf~~~ 239 (360)
T cd05627 224 VIM-YEMLIGYPPFCSE 239 (360)
T ss_pred cee-eecccCCCCCCCC
Confidence 887 6666655555443
No 225
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.95 E-value=7.6e-27 Score=250.78 Aligned_cols=288 Identities=18% Similarity=0.258 Sum_probs=222.5
Q ss_pred EeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEe
Q 000355 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWN 1341 (1620)
Q Consensus 1264 tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD 1341 (1620)
-++||..+++.|.++.+|.+|+||+. |.++.||-..+|+.+.++.||+++|+||...-+...+ +|+|.++++||
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaK----D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAK----DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecC----CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence 36899999999999999999999998 8999999999999999999999999999998777777 67799999999
Q ss_pred CCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC-----C
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-----N 1416 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~-----D 1416 (1620)
+.+|+++.+++... .|..+.|+.+|++++.++. .
T Consensus 81 v~tGk~la~~k~~~-----------------------------------------~Vk~~~F~~~gn~~l~~tD~~mg~~ 119 (327)
T KOG0643|consen 81 VETGKQLATWKTNS-----------------------------------------PVKRVDFSFGGNLILASTDKQMGYT 119 (327)
T ss_pred cCCCcEEEEeecCC-----------------------------------------eeEEEeeccCCcEEEEEehhhcCcc
Confidence 99999998887431 2444555567888877665 3
Q ss_pred CcEEEEECCCC-------ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc-E
Q 000355 1417 GSLRFIDINQG-------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-V 1488 (1620)
Q Consensus 1417 gtVrlwDl~tg-------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~-~ 1488 (1620)
+.|.++|++.. ++...+..+. +.++ ..+|.|-+++|++|..||.|..||.++|+ .
T Consensus 120 ~~v~~fdi~~~~~~~~s~ep~~kI~t~~------skit-----------~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~ 182 (327)
T KOG0643|consen 120 CFVSVFDIRDDSSDIDSEEPYLKIPTPD------SKIT-----------SALWGPLGETIIAGHEDGSISIYDARTGKEL 182 (327)
T ss_pred eEEEEEEccCChhhhcccCceEEecCCc------ccee-----------eeeecccCCEEEEecCCCcEEEEEcccCcee
Confidence 67999999843 3344443222 2233 34456788999999999999999999985 5
Q ss_pred EEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEe
Q 000355 1489 IASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1489 i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwd 1564 (1620)
+..-+-|...|+.+. ++|..++++||.|.+-++||.++- ..+.++.. ..+|+ +++|-...++.|+.-. --|-.
T Consensus 183 v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl--~v~Kty~t-e~PvN~aaisP~~d~VilgGGqeA~dVTT 259 (327)
T KOG0643|consen 183 VDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL--EVLKTYTT-ERPVNTAAISPLLDHVILGGGQEAMDVTT 259 (327)
T ss_pred eechhhhccccccccccCCcceEEecccCccceeeeccce--eeEEEeee-cccccceecccccceEEecCCceeeeeee
Confidence 566678999999999 999999999999999999999986 44445442 45677 4999888888876533 33333
Q ss_pred ccCCCCCCC-cceeeccceeeecCCC--CccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1565 LSKSADEDG-QHRLVPQKLYMVDNGA--KNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1565 l~~~~~~~g-~~~~~~~kl~~~~~g~--~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+. ..| ........++...-|. +|-++|++++|+|+|+..++||+||.|||.
T Consensus 260 T~~---r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 260 TST---RAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ecc---cccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence 321 122 1112223333333222 799999999999999999999999999984
No 226
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.95 E-value=7.6e-30 Score=277.42 Aligned_cols=198 Identities=15% Similarity=0.186 Sum_probs=171.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+-|.++.+||+|+||.||+|.+ .+.|.++|||.+... .+..+.. +||.||+.++.|+||++|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH------~EsG~v~AIK~VPV~----sDLQEII--------KEISIMQQC~S~yVVKYY 94 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIH------RESGHVLAIKKVPVD----TDLQEII--------KEISIMQQCKSKYVVKYY 94 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHH------hccCcEEEEEecCcc----chHHHHH--------HHHHHHHHcCCchhhhhh
Confidence 4588899999999999999886 267999999998663 2333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.|.....+|||||||+ |+..++++. +++.+++.++..+++..++||+|||...-||||||..|||++.+| +.||+
T Consensus 95 GSYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLA 171 (502)
T KOG0574|consen 95 GSYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLA 171 (502)
T ss_pred hhhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhh
Confidence 99999999999999999 899999985 678899999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC-CCCC
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDY 340 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs-~~dl 340 (1620)
|||.|......- +. .....|||+|||||+++...|+...|+|+.| ++.+++..||+ |.|+
T Consensus 172 DFGVAGQLTDTM-----AK------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLG-------ITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 172 DFGVAGQLTDTM-----AK------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLG-------ITAIEMAEGRPPYSDI 232 (502)
T ss_pred hccccchhhhhH-----Hh------hCccccCcccccHHHHHHhccchhhhHhhhc-------chhhhhhcCCCCcccc
Confidence 999998543210 00 1234589999999999999999999999999 77788889988 4554
No 227
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=2.1e-27 Score=279.28 Aligned_cols=141 Identities=15% Similarity=0.165 Sum_probs=116.5
Q ss_pred ceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHH---hhccCCcccccceeeEEE
Q 000355 111 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESS---VPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~---iL~~l~HpNIv~l~~~~~ 187 (1620)
.||+|+||.||++.+. .+++.+|+|.+.+............. +|.. ++...+||||+.+++++.
T Consensus 1 ~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL-------NERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEEC------CCCcEEEEEEEEccccccchHHHHHH-------HHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 4899999999999862 45789999998765433222222111 4443 344457999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
..+..++||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~--~~~l~dfg~ 143 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGL 143 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999995 9999887 355689999999999999999999999999999999999999998 899999999
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 144 ~~ 145 (279)
T cd05633 144 AC 145 (279)
T ss_pred ce
Confidence 86
No 228
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=1.9e-27 Score=288.12 Aligned_cols=150 Identities=23% Similarity=0.291 Sum_probs=125.9
Q ss_pred ccccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccc
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpN 178 (1620)
.+...++|.+.+.||+|+||.||+|.+ ..+++.+|+|++............+. +|+.+++.++|||
T Consensus 10 ~~~~~~~y~~~~~ig~g~~g~v~~~~~------~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~n 75 (342)
T cd07879 10 VWELPERYTSLKQVGSGAYGSVCSAID------KRTGEKVAIKKLSRPFQSEIFAKRAY--------RELTLLKHMQHEN 75 (342)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEe------CCCCcEEEEEEecCccccccchhHHH--------HHHHHHHhcCCCC
Confidence 344567999999999999999999986 24578999999875422222222333 8999999999999
Q ss_pred ccceeeEEEeCC------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 179 VAPVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 179 Iv~l~~~~~~~~------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
|+++++++.... .+++||||+..+|..++. ..+++..++.++.|++.||.|||++||+||||||+|||++
T Consensus 76 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~ 151 (342)
T cd07879 76 VIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN 151 (342)
T ss_pred ccchhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 999999987653 579999999888877653 3578999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCcc
Q 000355 253 DSCWSWLYICDKPLVG 268 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~ 268 (1620)
.++ .+||+|||+++
T Consensus 152 ~~~--~~kL~dfg~~~ 165 (342)
T cd07879 152 EDC--ELKILDFGLAR 165 (342)
T ss_pred CCC--CEEEeeCCCCc
Confidence 998 89999999987
No 229
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=4.3e-26 Score=305.04 Aligned_cols=277 Identities=15% Similarity=0.233 Sum_probs=220.8
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCC-----c----eeEEeecccCcEEEEEEccC-CCEEEEe
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-----S----ILSSIRAHHGALRSVAVGQD-ECTVFTA 1287 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g-----~----~l~tl~gH~~~V~svafspd-g~~LaSg 1287 (1620)
.+.+|.+.|++ |+|+|.+ +||||.|++|+|||... . .+..+. +...|.+++|++. +.+|++|
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~-----latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~ 551 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEF-----FATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASS 551 (793)
T ss_pred cccCCCCcEEEEEECCCCCE-----EEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEE
Confidence 34568999986 9999987 99999999999999742 1 233344 3568999999875 6899999
Q ss_pred ccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEee-CCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCC
Q 000355 1288 GIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1364 (1620)
Q Consensus 1288 s~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~-~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~ 1364 (1620)
+. ||+|++||+.+++.+..+.+|.+.|++++|++ ++..++++ ||+|++||+++++++..+..+.
T Consensus 552 ~~----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~--------- 618 (793)
T PLN00181 552 NF----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA--------- 618 (793)
T ss_pred eC----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC---------
Confidence 96 99999999999999999999999999999997 56666444 9999999999998877665321
Q ss_pred CCCcccccccccccccccCCCCCeEEEeecCCceEEEEEe-cCCCEEEEEECCCcEEEEECCCCc-eeEEeeCCCccccc
Q 000355 1365 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI-ECVERLVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGF 1442 (1620)
Q Consensus 1365 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s-~dg~~lasgs~DgtVrlwDl~tg~-~l~~l~~~~~~v~~ 1442 (1620)
.+.++.++ ++|..+++|+.||+|++||+++++ .+..+.+|
T Consensus 619 --------------------------------~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h------ 660 (793)
T PLN00181 619 --------------------------------NICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGH------ 660 (793)
T ss_pred --------------------------------CeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCC------
Confidence 13455553 468999999999999999998865 45555544
Q ss_pred CCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC------cEEEEEEccCCcEEEEE-eCCCCEEEEEeC
Q 000355 1443 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG------NVIASWRAHDGYVTKLA-APEDHLLVSSSL 1515 (1620)
Q Consensus 1443 ~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg------~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1515 (1620)
...|.+++|. ++.++++|+.|++|++||++++ +++..+.+|...+++++ ++++.+|++|+.
T Consensus 661 ~~~V~~v~f~------------~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~ 728 (793)
T PLN00181 661 SKTVSYVRFV------------DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 728 (793)
T ss_pred CCCEEEEEEe------------CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 4457888873 3468999999999999999853 57888999999999999 899999999999
Q ss_pred CCcEEEEECCCCCCCCCe-----------EeecCCCCEE--EEeecCCEEEEEeCCc-eEEEec
Q 000355 1516 DKTLRIWDLRRNWPSQPT-----------VFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1516 DgtI~IWDl~~~~~~~~~-----------~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl 1565 (1620)
|++|++|+.....+...+ ....|...|. +|++++..|++|+.|| |++|++
T Consensus 729 D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 729 TNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 999999998654211101 1233445576 4899999999999999 999986
No 230
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.95 E-value=5.2e-27 Score=272.59 Aligned_cols=148 Identities=19% Similarity=0.183 Sum_probs=128.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||.|+||.||+|... .++..+|+|++....... ....+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL------PNNEKVAIKRIDLEKCQT-SVDELR--------KEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc------CCCcEEEEEEeccCCcch-HHHHHH--------HHHHHHHhcCCCCEEEEE
Confidence 47999999999999999999851 357889999987644333 333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+.+..++..++|||++++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||++++++ .+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l 143 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKI 143 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEE
Confidence 999999999999999985 9999997432 25689999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 144 ~df~~~~ 150 (267)
T cd06610 144 ADFGVSA 150 (267)
T ss_pred cccchHH
Confidence 9999987
No 231
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95 E-value=2.1e-27 Score=287.84 Aligned_cols=149 Identities=24% Similarity=0.317 Sum_probs=127.9
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
...++|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||+
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv 77 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDT------KTGRKVAIKKLSRPFQSAIHAKRTY--------RELRLLKHMDHENVI 77 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEEC------CCCcEEEEEecccccchhhHHHHHH--------HHHHHHHhccCCCHH
Confidence 34678999999999999999999862 3578899999865322222223333 899999999999999
Q ss_pred ceeeEEEeCCE------EEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 181 PVLGLLKTSGL------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 181 ~l~~~~~~~~~------~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++++...+. +++|+||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~ 154 (343)
T cd07851 78 GLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED 154 (343)
T ss_pred HHHHHhhccccccccccEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 99998876654 99999999989999987 3468999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||++.
T Consensus 155 ~--~~kL~dfg~~~ 166 (343)
T cd07851 155 C--ELKILDFGLAR 166 (343)
T ss_pred C--CEEEccccccc
Confidence 8 89999999987
No 232
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95 E-value=6.2e-27 Score=276.35 Aligned_cols=154 Identities=17% Similarity=0.144 Sum_probs=126.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|..... .....+..||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDI-IKGEAETRVAVKTVNESA-SLRERIEFL--------NEASVMKGFTCHHVVRL 74 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEecc-CCCCcceEEEEEECCCcC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999875221 112346789999986532 222223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
++++...+..|+||||++ |+|.++++... ....+...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~ 154 (288)
T cd05061 75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 154 (288)
T ss_pred EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence 999999999999999998 59999997421 123456778889999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 155 ~~--~~~L~Dfg~~~ 167 (288)
T cd05061 155 DF--TVKIGDFGMTR 167 (288)
T ss_pred CC--cEEECcCCccc
Confidence 88 89999999987
No 233
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=2e-26 Score=275.22 Aligned_cols=351 Identities=15% Similarity=0.196 Sum_probs=258.4
Q ss_pred ceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC
Q 000355 1227 WFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1303 (1620)
Q Consensus 1227 ~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~ 1303 (1620)
.|.+ .++|... ||.|=.||.|++|+.. +...-++.||..+|+++.|...|..|+|||. |+.|.+||+-
T Consensus 67 evt~l~~~~d~l~-----lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGsk----Dt~IIvwDlV 137 (888)
T KOG0306|consen 67 EVTCLRSSDDILL-----LAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSK----DTDIIVWDLV 137 (888)
T ss_pred eEEEeeccCCcce-----EEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCC----CccEEEEEec
Confidence 4554 3445443 8999999999999988 7788899999999999999999999999998 9999999998
Q ss_pred CCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCcccc---------------------
Q 000355 1304 RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH--------------------- 1360 (1620)
Q Consensus 1304 tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~--------------------- 1360 (1620)
...-+..++||.+.|+..-|..+...++|+ |++|++||+.+..|..+.-.|......
T Consensus 138 ~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~ 217 (888)
T KOG0306|consen 138 GEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWE 217 (888)
T ss_pred cceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEE
Confidence 777788999999999999987767777444 999999999987776554332211000
Q ss_pred ---------------------------------ccCCCCCcccccccc--------------------------cccc--
Q 000355 1361 ---------------------------------GGSPSSSISKINTDQ--------------------------VGML-- 1379 (1620)
Q Consensus 1361 ---------------------------------~~s~s~~~~~~~~~~--------------------------~~~~-- 1379 (1620)
...++.......+.. ....
T Consensus 218 L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~ 297 (888)
T KOG0306|consen 218 LAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETE 297 (888)
T ss_pred eecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhcccc
Confidence 000000000000000 0000
Q ss_pred -----------------------------cc--cCC--------------------CCCe---------EEEeecCCceE
Q 000355 1380 -----------------------------NS--NTL--------------------SSGI---------LSTAFDGNLYT 1399 (1620)
Q Consensus 1380 -----------------------------~~--~~~--------------------s~~v---------~sv~f~~~~vt 1399 (1620)
.+ ... +... .....+...|.
T Consensus 298 e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVR 377 (888)
T KOG0306|consen 298 ENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVR 377 (888)
T ss_pred ccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhee
Confidence 00 000 0000 01111223466
Q ss_pred EEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEE
Q 000355 1400 CLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCR 1479 (1620)
Q Consensus 1400 ~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~ 1479 (1620)
.++++.+...+++|+ .+.+++|+..+.++++++... .+.+.+|. |.++++++|..+|.+.
T Consensus 378 sl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~--------y~l~~~Fv-----------pgd~~Iv~G~k~Gel~ 437 (888)
T KOG0306|consen 378 SLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCG--------YILASKFV-----------PGDRYIVLGTKNGELQ 437 (888)
T ss_pred EEEeecCceeeeecC-CCcEEEEEccCcceeEEeccc--------cEEEEEec-----------CCCceEEEeccCCceE
Confidence 677777666666654 478999999999999998742 46677776 4457999999999999
Q ss_pred EEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCC-----CCC------------------------
Q 000355 1480 LFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR-----NWP------------------------ 1529 (1620)
Q Consensus 1480 lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~-----~~~------------------------ 1529 (1620)
+||+.+...+.+.++|++.|++++ +||+..+++||.|++|++||..- +..
T Consensus 438 vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S 517 (888)
T KOG0306|consen 438 VFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS 517 (888)
T ss_pred EEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc
Confidence 999999999999999999999999 99999999999999999998631 100
Q ss_pred -----------------------CCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceeecccee
Q 000355 1530 -----------------------SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLY 1583 (1620)
Q Consensus 1530 -----------------------~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~ 1583 (1620)
+-...+-||.-||.| +|||+++++|||.|+ |++|-++ -|.+.. .+
T Consensus 518 pdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd-----FGDCHK---S~- 588 (888)
T KOG0306|consen 518 PDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD-----FGDCHK---SF- 588 (888)
T ss_pred CCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc-----cchhhh---hh-
Confidence 001244589999997 899999999999999 9999876 344321 11
Q ss_pred eecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1584 MVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1584 ~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+|...|.++.|.|...+|.+||.||.||-||
T Consensus 589 -----fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD 620 (888)
T KOG0306|consen 589 -----FAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD 620 (888)
T ss_pred -----hcccCceeEEEEcccceeEEEecCcceEEeec
Confidence 25889999999999999999999999999997
No 234
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.95 E-value=7.6e-27 Score=275.81 Aligned_cols=147 Identities=20% Similarity=0.254 Sum_probs=124.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ...+. +|+.+++++ +||||++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNK------KDGSLAAVKILDPISDV---DEEIE--------AEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEEC------CCCCEEEEEEecccccH---HHHHH--------HHHHHHHHhcCCCCeEE
Confidence 678999999999999999999862 46789999998653221 12222 789999988 7999999
Q ss_pred eeeEEEeC-----CEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 182 VLGLLKTS-----GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 182 l~~~~~~~-----~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
+++++... +.+++||||+++ +|.++++. .....+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~ 163 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 99998754 368999999985 99998863 23456889999999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcc
Q 000355 254 SCWSWLYICDKPLVG 268 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~ 268 (1620)
++ .+||+|||+++
T Consensus 164 ~~--~~kl~dfg~~~ 176 (291)
T cd06639 164 EG--GVKLVDFGVSA 176 (291)
T ss_pred CC--CEEEeecccch
Confidence 98 89999999987
No 235
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=3e-27 Score=277.83 Aligned_cols=147 Identities=16% Similarity=0.193 Sum_probs=125.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.+.|++.+.||+|+||.||+|.+. .+++.+|+|.+.... ....++. +|+.+++++ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~a~K~~~~~~---~~~~~~~--------~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTE---DEEEEIK--------LEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc------CCCcEEEEEEEecCh---HHHHHHH--------HHHHHHHHhcCCCcEEE
Confidence 468999999999999999999962 456889999986532 2222333 788888888 6999999
Q ss_pred eeeEEEe------CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 182 VLGLLKT------SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 182 l~~~~~~------~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+++++.. .+.+|+||||+++ +|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999853 4589999999985 99999986555668888899999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||+++
T Consensus 158 ~--~~~l~dfg~~~ 169 (282)
T cd06636 158 A--EVKLVDFGVSA 169 (282)
T ss_pred C--CEEEeeCcchh
Confidence 8 89999999987
No 236
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.95 E-value=4.8e-27 Score=276.52 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=124.4
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
..++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ..++. +|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~~i~ 78 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNK------KNGSKAAVKILDPIHDI---DEEIE--------AEYNILKALSDHPNVV 78 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEEC------CCCceeEEEeeccccch---HHHHH--------HHHHHHHHHhcCCCee
Confidence 4679999999999999999999862 35688999987542211 12233 799999999 699999
Q ss_pred ceeeEEE-----eCCEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 181 PVLGLLK-----TSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 181 ~l~~~~~-----~~~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
++++++. .++.+++||||++| +|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 158 (286)
T cd06638 79 KFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC
Confidence 9999884 34579999999985 99988763 2345678899999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCccc
Q 000355 253 DSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~ 269 (1620)
.++ .+||+|||+++.
T Consensus 159 ~~~--~~kl~dfg~~~~ 173 (286)
T cd06638 159 TEG--GVKLVDFGVSAQ 173 (286)
T ss_pred CCC--CEEEccCCceee
Confidence 998 799999999873
No 237
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=4.4e-27 Score=279.05 Aligned_cols=150 Identities=20% Similarity=0.183 Sum_probs=127.8
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .+++.||+|.++...........+. +|+++++.++||||++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~~i~~ 70 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDK------DTGELVALKKVRLDNEKEGFPITAI--------REIKILRQLNHRNIVN 70 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEEC------CCCcEEEEEEEeecccccCchHHHH--------HHHHHHHhCCCCCeee
Confidence 3678999999999999999999962 3578899999875432222222223 8999999999999999
Q ss_pred eeeEEEeCC----------EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 182 VLGLLKTSG----------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 182 l~~~~~~~~----------~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
+++++.+.. .+++||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 149 (302)
T cd07864 71 LKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL 149 (302)
T ss_pred eeheecCcchhhhccccCCcEEEEEcccCccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999987655 8999999999998888874 24468999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCcc
Q 000355 252 TDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~ 268 (1620)
++++ .+||+|||+++
T Consensus 150 ~~~~--~~kl~dfg~~~ 164 (302)
T cd07864 150 NNKG--QIKLADFGLAR 164 (302)
T ss_pred CCCC--cEEeCcccccc
Confidence 9998 89999999987
No 238
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=5.2e-27 Score=274.56 Aligned_cols=146 Identities=16% Similarity=0.211 Sum_probs=127.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK------RTNQVVAIKVIDLEE-AEDEIEDIQ--------QEIQFLSQCRSPYITKYY 65 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC------CCCeEEEEEEeeccc-cchHHHHHH--------HHHHHHHHcCCCCeeeee
Confidence 46889999999999999999862 467899999987542 222233333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..+..+|+|+||+++ +|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+||++++++ .++|+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~ 140 (274)
T cd06609 66 GSFLKGSKLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLA 140 (274)
T ss_pred EEEEECCeEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEc
Confidence 999999999999999985 99999973 2789999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000355 263 DKPLVGF 269 (1620)
Q Consensus 263 DFGla~~ 269 (1620)
|||+++.
T Consensus 141 d~g~~~~ 147 (274)
T cd06609 141 DFGVSGQ 147 (274)
T ss_pred cccccee
Confidence 9999873
No 239
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=1.2e-27 Score=292.93 Aligned_cols=205 Identities=17% Similarity=0.199 Sum_probs=166.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|+|++.+...........+. +|+.+++.++||||+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHK------STRKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEC------CCCcEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhCCCCCCCeE
Confidence 579999999999999999999862 45789999998653222222222222 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+++.+|+||||++ |+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL 183 (371)
T cd05622 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (371)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEE
Confidence 999999999999999998 599999873 3578999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccc----cccccccccccccchHHHHhhhhcccCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~----y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
+|||+++........ ......||+.|||||++.+.. |+.++|+|+.|++. |+++++..+|.+++
T Consensus 184 ~DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~~~ 251 (371)
T cd05622 184 ADFGTCMKMNKEGMV----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYADS 251 (371)
T ss_pred EeCCceeEcCcCCcc----------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHH-HHHHhCCCCCCCCC
Confidence 999999843211100 011234789999999987543 78899999999877 77777776666554
No 240
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=2.5e-26 Score=256.50 Aligned_cols=291 Identities=16% Similarity=0.197 Sum_probs=244.1
Q ss_pred cccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1217 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
+.-.+.||++.|.+ ||.||.+ ||||+.||.++||+.. +.....+-+--+.|.-+.|+|.+.+|+.|+.
T Consensus 98 ~~~eltgHKDSVt~~~Fshdgtl-----LATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~---- 168 (399)
T KOG0296|consen 98 FAGELTGHKDSVTCCSFSHDGTL-----LATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST---- 168 (399)
T ss_pred ceeEecCCCCceEEEEEccCceE-----EEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC----
Confidence 56778999999996 9999998 9999999999999988 6677777677788999999999999999998
Q ss_pred CcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccc
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1371 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~ 1371 (1620)
||.|.+|.+.++...+.+.||..++++=.|.|+|+++ +..||+|++||+++|+++..+.....
T Consensus 169 DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~--------------- 233 (399)
T KOG0296|consen 169 DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEG--------------- 233 (399)
T ss_pred CCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEeccccc---------------
Confidence 9999999999988889999999999999999999998 44599999999999998877763210
Q ss_pred cccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCC--cccccCCccceE
Q 000355 1372 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP--TELGFPSLVSAI 1449 (1620)
Q Consensus 1372 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~--~~v~~~~~V~sv 1449 (1620)
...+|+.++.++..+++|+.++.+.+-...+|+.+....+.. ....+...+.||
T Consensus 234 ------------------------~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esv 289 (399)
T KOG0296|consen 234 ------------------------LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESV 289 (399)
T ss_pred ------------------------CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhh
Confidence 113566666778899999999999999999999887776411 112344556666
Q ss_pred eeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCC
Q 000355 1450 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1450 a~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~ 1529 (1620)
.+.+..+ .=.+.|+|+-||+|.|||..+.++...+. |..+|..+.+-+..+|++++.||+|+.||.|+|
T Consensus 290 e~~~~ss--------~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG-- 358 (399)
T KOG0296|consen 290 ESIPSSS--------KLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLNTDYLLTACANGKVRQWDARTG-- 358 (399)
T ss_pred hhccccc--------ccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcCcchheeeccCceEEeeecccc--
Confidence 6654332 22578999999999999999877766666 899999999444789999999999999999999
Q ss_pred CCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEecc
Q 000355 1530 SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
...+++.||...|.+ ++|++++++|+|.|+ .+||...
T Consensus 359 ~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 359 QLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 778899999999996 889999999999999 8998853
No 241
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.95 E-value=9e-28 Score=276.29 Aligned_cols=280 Identities=15% Similarity=0.211 Sum_probs=226.7
Q ss_pred cccccccCCCceec--cCC-CCCCCCCCeEEEEcCCCCEEEEeCC--CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1217 ATSNLMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1217 ~~~~l~gH~~~V~~--~Sp-dg~~~~~~~lasgS~D~~i~lWd~~--g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
-..++.||+..|.+ |.| .+.+ |++||.|+.|+||++- +.+++++.||..+|.+++|+.+|..++|+|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hL-----lLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s--- 277 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHL-----LLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS--- 277 (503)
T ss_pred heeeccCCccccchhhhccceeeE-----EEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeee---
Confidence 36788999999987 666 5554 9999999999999976 789999999999999999999999999999
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE---EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1368 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l---aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~ 1368 (1620)
||++|++||++||+|+..|. -...+++|.|+|++..+ +..|+.|+.||+++|+.++.+..|-
T Consensus 278 -fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hL------------- 342 (503)
T KOG0282|consen 278 -FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHL------------- 342 (503)
T ss_pred -cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhh-------------
Confidence 69999999999999999886 35678999999998543 3449999999999999888776542
Q ss_pred ccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1369 ~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
+.|. .+.|-++|..+++.+.|+++++|+.+.+-.++...... .....
T Consensus 343 -----------------g~i~----------~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~-----~hsmP- 389 (503)
T KOG0282|consen 343 -----------------GAIL----------DITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPE-----MHTMP- 389 (503)
T ss_pred -----------------hhee----------eeEEccCCceEeeeccCccEEEEEcCCCccchhhcchh-----hccCc-
Confidence 2233 34455579999999999999999998876654332111 01122
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC---cEEEEEEccCCcEE--EEE-eCCCCEEEEEeCCCcEEEE
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG---NVIASWRAHDGYVT--KLA-APEDHLLVSSSLDKTLRIW 1522 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg---~~i~~l~gH~~~V~--sva-spdg~~LaSgS~DgtI~IW 1522 (1620)
+.+..|+++++++=+.|+.|.+|.+... ..-..++||..+=. .|. +|||.+|+||+.||.+.+|
T Consensus 390 ----------~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~w 459 (503)
T KOG0282|consen 390 ----------CLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFW 459 (503)
T ss_pred ----------ceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEe
Confidence 3344588899999999999999987643 23456778865443 444 9999999999999999999
Q ss_pred ECCCCCCCCCeEeecCCCCEEE--EeecC-CEEEEEeCCc-eEEEe
Q 000355 1523 DLRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1523 Dl~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwd 1564 (1620)
|.++. +.+..++.|..++.. |.|.. ..+|||+.|| |++|+
T Consensus 460 dwkt~--kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 460 DWKTT--KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred echhh--hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 99987 667799999888884 77764 5799999999 99996
No 242
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=3.2e-27 Score=285.33 Aligned_cols=148 Identities=24% Similarity=0.390 Sum_probs=126.5
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
+.++|++.+.||+|+||.||+|.+. .++..+|+|++............+. +|+.+++.+ +||||+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDR------RTKEVVALKKIFDAFRNATDAQRTF--------REIMFLQELGDHPNIV 70 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEc------CCCeEEEEEeeccccCcchhhhhhh--------HHHHHHHHhcCCCCcc
Confidence 4678999999999999999999862 3568899999865332222223333 899999999 999999
Q ss_pred ceeeEEEeCC--EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 181 PVLGLLKTSG--LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 181 ~l~~~~~~~~--~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++++++...+ .+|+||||++++|.+++.. ..+.+..++.++.||+.||.|||++||+||||||+|||++.++ .
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~--~ 145 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYMETDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC--R 145 (337)
T ss_pred ceeeeeccCCCceEEEEecccccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 9999986543 7899999999999999873 2678888889999999999999999999999999999999999 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 146 ~kl~d~g~~~ 155 (337)
T cd07852 146 VKLADFGLAR 155 (337)
T ss_pred EEEeeccchh
Confidence 9999999988
No 243
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7e-28 Score=289.96 Aligned_cols=143 Identities=19% Similarity=0.165 Sum_probs=118.5
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
..+.|++...+|.|+|+.|-.|.+ ..+++..++|++.+.....+ +|+.++... +||||+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~------~~t~~~~~vkii~~~~~~~~--------------~e~~~~~~~~~h~niv 379 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCES------SPTDQEPAVKIISKRADDNQ--------------DEIPISLLVRDHPNIV 379 (612)
T ss_pred cchhhccccccCCCCccceeeeec------cccccchhheeccccccccc--------------cccchhhhhcCCCcce
Confidence 467899999999999999998886 24568889999987532222 677655544 799999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe-cCCCceE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSW 258 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl-~~~~~~~ 258 (1620)
++++++.+..+.|+|||.+.| .+.+.+.. ...+. .++..|++||+.|+.|||++|||||||||+|||+ ++.+ +
T Consensus 380 ~~~~v~~~~~~~~~v~e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~ 454 (612)
T KOG0603|consen 380 KSHDVYEDGKEIYLVMELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--H 454 (612)
T ss_pred eecceecCCceeeeeehhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--c
Confidence 999999999999999999996 66666663 23333 7778899999999999999999999999999999 5777 8
Q ss_pred EEEeecCCccc
Q 000355 259 LYICDKPLVGF 269 (1620)
Q Consensus 259 lKL~DFGla~~ 269 (1620)
++|+|||.++.
T Consensus 455 lrltyFG~a~~ 465 (612)
T KOG0603|consen 455 LRLTYFGFWSE 465 (612)
T ss_pred EEEEEechhhh
Confidence 99999999984
No 244
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.95 E-value=4e-27 Score=276.21 Aligned_cols=141 Identities=16% Similarity=0.110 Sum_probs=121.4
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||+||+|.+. .+++.+|+|.+......... ...+. +|+++|+.++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVK------ATGKMYACKKLDKKRLKKRKGEQMAL--------NEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEc------CCCcEEEEEEEehhhhhhhhhhHHHH--------HHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999999862 45789999998764322222 22223 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 191 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~ 143 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAV 143 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchh
Confidence 99999999995 999999754444789999999999999999999999999999999999999998 89999999887
No 245
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=6e-27 Score=270.52 Aligned_cols=145 Identities=18% Similarity=0.221 Sum_probs=127.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|... .++..+++|.+..... ..++. +|+++++.++||||+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~----~~~~~--------~e~~~~~~l~~~~i~~~ 63 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHK------ETGQVVAIKVVPVEED----LQEII--------KEISILKQCDSPYIVKY 63 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEc------CCCcEEEEEEeecHHH----HHHHH--------HHHHHHHhCCCCcEeee
Confidence 357999999999999999999862 2468899999865321 33344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..+..+|+++||+++ +|.+++.. ....+++..++.++.|++.||.|||+++|+||||+|+||+++.++ .+||
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l 140 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKL 140 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEE
Confidence 9999999999999999995 99999874 345679999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 141 ~dfg~~~ 147 (256)
T cd06612 141 ADFGVSG 147 (256)
T ss_pred cccccch
Confidence 9999987
No 246
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.95 E-value=1.1e-26 Score=271.53 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=125.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh----HHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
+|.+.+.||+|+||.||+|.+. .+++.+|+|.++........ .....+.+ .+|+.+++.++||||+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~----~~e~~~l~~l~h~~i~ 71 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV------TTGEMMAVKQVELPATIAGRHDSRQKDMVKAL----RSEIETLKDLDHLNIV 71 (272)
T ss_pred ceeecceecccCceEEEEEeec------CCCceeeeeeeechhhhhcccchHHHHHHHHH----HHHHHHHHhcCCCCcc
Confidence 5888999999999999999851 45789999988642221111 11111111 1899999999999999
Q ss_pred ceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++++...+.+++||||+++ +|.++++. .+.+++..++.++.||+.||.|||++|++||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~ 147 (272)
T cd06629 72 QYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--IC 147 (272)
T ss_pred eEEEEeccCCceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eE
Confidence 999999999999999999985 99999984 36788999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 148 ~l~d~~~~~ 156 (272)
T cd06629 148 KISDFGISK 156 (272)
T ss_pred EEeeccccc
Confidence 999999987
No 247
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95 E-value=4.2e-27 Score=279.29 Aligned_cols=143 Identities=18% Similarity=0.167 Sum_probs=122.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|+....||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREK------HSGRQVAVKMMDLRKQQ--RRELLF--------NEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEc------CCCCEEEEEEEEecccc--hHHHHH--------HHHHHHHhCCCCchhhhhh
Confidence 3445568999999999999862 35788999998653222 222333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--~~kL~d 160 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSD 160 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--cEEEee
Confidence 99999999999999995 8988776 34678999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 161 fg~~~ 165 (297)
T cd06659 161 FGFCA 165 (297)
T ss_pred chhHh
Confidence 99886
No 248
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=3.3e-27 Score=284.25 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=122.4
Q ss_pred eceeee--eeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEE
Q 000355 110 AFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~ 187 (1620)
..||+| +||+||+|++ ..+++.||+|.+..........+.+. +|+.+++.++||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~------~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARH------TPTGTLVTVRITDLENCTEEHLKALQ--------NEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEE------cCCCcEEEEEEeccccCCHHHHHHHH--------HHHHHHHhCCCCCcceEeeeEe
Confidence 467777 9999999986 24689999999876544433333333 8999999999999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++..++||||+.+ +|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|++|||.
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~--~~~~~~~~~ 147 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG--LVSLSGLSH 147 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC--cEEEechHH
Confidence 99999999999995 999999854445689999999999999999999999999999999999999988 899999986
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
+.
T Consensus 148 ~~ 149 (328)
T cd08226 148 LY 149 (328)
T ss_pred Hh
Confidence 54
No 249
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=8e-28 Score=287.91 Aligned_cols=217 Identities=17% Similarity=0.203 Sum_probs=181.0
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
.+....|.+.+.||+|.|++|.+|++. -++..||||.+.+..........+. +|+++|+.|+||||
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~------~t~~~VaiK~idkt~ln~~~~~k~~--------rev~imk~l~HPnI 117 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHI------LTGTEVAIKIIDKTQLNPSKRQKLG--------REVDIMKSLNHPNI 117 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEec------CCCceEEEEEehhcccChHHHHHHH--------HHHHHHHhcCCcce
Confidence 344778999999999999999999973 3578899999988766655544444 99999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
|+++.+.+++..+|+||||+. |++++++. +.+.+.+..++.++.|+++|++|||+++|+|||||.+||||+.+. +
T Consensus 118 vkl~~v~~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m--n 193 (596)
T KOG0586|consen 118 VKLFSVIETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM--N 193 (596)
T ss_pred eeeeeeeeecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc--c
Confidence 999999999999999999998 59999999 567788899999999999999999999999999999999999999 8
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccc-ccccccccccchHHHHhhhhcccCCCC
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~-~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+||+|||++........ . .+.| |++.|.|||++.+..|+. .+|.|+.|.+. |..+.+.=+|.|...
T Consensus 194 ikIaDfgfS~~~~~~~~------l-----qt~c-gsppyAaPEl~~g~~y~gpe~D~Wslgvvl-y~LV~GsLPFDG~~l 260 (596)
T KOG0586|consen 194 IKIADFGFSTFFDYGLM------L-----QTFC-GSPPYAAPELFNGKKYDGPEVDIWSLGVVL-YALVEGSLPFDGQNL 260 (596)
T ss_pred eeeeccccceeeccccc------c-----cccC-CCCCccChHhhcCcccCCcceehhhhhhhh-eeeeecccccCCccc
Confidence 99999999985432110 0 1233 578899999999999965 99999999887 666666666777766
Q ss_pred CCCcCCcccc
Q 000355 338 GDYTFHMVMP 347 (1620)
Q Consensus 338 ~dl~q~pv~p 347 (1620)
..+...-++-
T Consensus 261 k~Lr~rvl~g 270 (596)
T KOG0586|consen 261 KELRPRVLRG 270 (596)
T ss_pred ccccchheee
Confidence 6665544433
No 250
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=3.2e-27 Score=279.63 Aligned_cols=144 Identities=19% Similarity=0.188 Sum_probs=123.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.|.....||+|+||.||++.+. .++..+|||.+.... ......+. +|+.+++.++||||++++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEK------HTGKQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYHHENVVDMY 85 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEEC------CCCCEEEEEEEecch--HHHHHHHH--------HHHHHHHhCCCCcHHHHH
Confidence 45666788999999999998862 357889999986422 22223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+...+..|+||||+++ +|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~ 160 (292)
T cd06658 86 NSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLS 160 (292)
T ss_pred HheecCCeEEEEEeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEc
Confidence 999999999999999985 8888876 34578999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 161 dfg~~~ 166 (292)
T cd06658 161 DFGFCA 166 (292)
T ss_pred cCcchh
Confidence 999987
No 251
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.95 E-value=1.2e-26 Score=276.66 Aligned_cols=149 Identities=18% Similarity=0.158 Sum_probs=129.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|+..+.||+|+||.||+|.+. .+++.||+|.+....... ....++. +|+++++.++||||++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~niv~ 79 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQQLRHPNTIE 79 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc------CCCcEEEEEEEeccccCcHHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 457999999999999999999862 357899999986543322 2223344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++++..++..|+||||++|++.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~--~~kL 156 (307)
T cd06607 80 YKGCYLREHTAWLVMEYCLGSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG--TVKL 156 (307)
T ss_pred EEEEEEeCCeEEEEHHhhCCCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--CEEE
Confidence 99999999999999999999998888642 34689999999999999999999999999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 157 ~dfg~~~ 163 (307)
T cd06607 157 ADFGSAS 163 (307)
T ss_pred eecCcce
Confidence 9999887
No 252
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.95 E-value=1.2e-27 Score=290.39 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=167.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|++. .+++.||+|++............... +|++++..++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK------DTGQVYAMKVLRKSDMIKRNQIAHVR-------AERDILADADSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC------CCCCEEEEEEEEHHHHhhccHHHHHH-------HHHHHHHhcCCCCccchh
Confidence 47999999999999999999972 36789999999764332222222222 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+|+||||++| +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~ 143 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLA 143 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEee
Confidence 999999999999999984 99999984 46789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccC------------------CCCCCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 263 DKPLVGFNSIADWCTI------------------PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~------------------~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
|||+++.......... ..............||+.|+|||++.+..++.++|+|+.|++. |+
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il-~e 222 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL-YE 222 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh-hh
Confidence 9999985432210000 0000000112334578999999999999999999999999876 66
Q ss_pred HHhhhhccc
Q 000355 325 YLLFLNKLA 333 (1620)
Q Consensus 325 yL~~ln~~~ 333 (1620)
++++..+|.
T Consensus 223 ll~g~~Pf~ 231 (350)
T cd05573 223 MLYGFPPFY 231 (350)
T ss_pred hccCCCCCC
Confidence 555444443
No 253
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.95 E-value=4.9e-27 Score=272.13 Aligned_cols=146 Identities=21% Similarity=0.266 Sum_probs=128.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+|++.+.||.|+||.||+|.+. .++..+|+|.+.+..... ...+.+. +|+++++.++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR------DTKKMFAMKYMNKQKCVEKGSVRNVL--------NERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc------cCCcEEEEEEEehhhhcchhHHHHHH--------HHHHHHHhCCCCChHHHH
Confidence 5899999999999999999862 357889999997644333 2333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+.+..++.+++||||+.| +|.+++.. ...+++..+..++.||++||.|||++||+|+||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~ 142 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHIT 142 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEe
Confidence 999999999999999985 99999973 35789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||++.
T Consensus 143 d~~~~~ 148 (258)
T cd05578 143 DFNIAT 148 (258)
T ss_pred eccccc
Confidence 999887
No 254
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=9.8e-27 Score=280.15 Aligned_cols=149 Identities=21% Similarity=0.339 Sum_probs=127.3
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
.+.++|++.+.||+|+||.||+|.+. .++..+|+|++.+..........+. +|+++++.++||||+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv 72 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQ------LTGQNVAIKKIMKPFSTPVLAKRTY--------RELKLLKHLRHENII 72 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEEC------CCCCEEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCee
Confidence 35678999999999999999999862 4678999998865322222223333 899999999999999
Q ss_pred ceeeEEEe-CCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 181 PVLGLLKT-SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 181 ~l~~~~~~-~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++|.. .+..|+||||++++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 73 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--~~ 147 (328)
T cd07856 73 SLSDIFISPLEDIYFVTELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DL 147 (328)
T ss_pred eEeeeEecCCCcEEEEeehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--CE
Confidence 99999876 45899999999989998886 34578888899999999999999999999999999999999988 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||+++
T Consensus 148 ~l~dfg~~~ 156 (328)
T cd07856 148 KICDFGLAR 156 (328)
T ss_pred EeCcccccc
Confidence 999999887
No 255
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95 E-value=9e-27 Score=271.62 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=126.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+++|.+..... ...++. +|+.+++++ +||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK------KTGQLVAIKIMDIIED---EEEEIK--------EEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC------CCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHhcCCCChhe
Confidence 578999999999999999999962 3467899999865422 223333 899999998 6999999
Q ss_pred eeeEEEeCC------EEEEEEeCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec
Q 000355 182 VLGLLKTSG------LITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 252 (1620)
Q Consensus 182 l~~~~~~~~------~~~lV~E~~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 252 (1620)
+++++.... .+++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 58999999995 9999887433 46789999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecCCccc
Q 000355 253 DSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~ 269 (1620)
.++ .+||+|||++..
T Consensus 148 ~~~--~~~l~d~~~~~~ 162 (275)
T cd06608 148 KNA--EVKLVDFGVSAQ 162 (275)
T ss_pred cCC--eEEECCCcccee
Confidence 998 899999999873
No 256
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=9.8e-27 Score=273.50 Aligned_cols=147 Identities=24% Similarity=0.246 Sum_probs=123.5
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC---Ccccccce
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAPV 182 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv~l 182 (1620)
|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.+ +||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL------NTGRFVALKKVRVPLSEEGIPLSTL--------REIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC------CCCCEEEEEEeccccccchhhhhHH--------HHHHHHHHhhccCCCCcceE
Confidence 678899999999999999962 2578899999975433221112222 677766555 69999999
Q ss_pred eeEEEeCCE-----EEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 183 LGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 183 ~~~~~~~~~-----~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
++++...+. ++++|||++++|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-- 144 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-- 144 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--
Confidence 999998876 9999999999999998864445689999999999999999999999999999999999999998
Q ss_pred EEEEeecCCcc
Q 000355 258 WLYICDKPLVG 268 (1620)
Q Consensus 258 ~lKL~DFGla~ 268 (1620)
.+||+|||+++
T Consensus 145 ~~~l~dfg~~~ 155 (287)
T cd07838 145 QVKIADFGLAR 155 (287)
T ss_pred CEEEeccCcce
Confidence 89999999887
No 257
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=6.5e-28 Score=286.66 Aligned_cols=193 Identities=19% Similarity=0.186 Sum_probs=161.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.+++++.||+|-||+||+|+. .....||+|.++...... ..|+ +|+++|++|+|+|||++++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~-------~~~~~vavk~ik~~~m~~---~~f~--------~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKW-------NGSTKVAVKTIKEGSMSP---EAFL--------REAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred HHHHHHHhcCCccceEEEEEE-------cCCCcccceEEeccccCh---hHHH--------HHHHHHHhCcccCeEEEEE
Confidence 466789999999999999985 233478999998764443 3455 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..++.+|||||||+ |+|.++|+...+..+...+...++.||++|++||+++++|||||...|||++++. .+||+|
T Consensus 269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIsD 346 (468)
T KOG0197|consen 269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKISD 346 (468)
T ss_pred EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEcc
Confidence 9999889999999999 8999999975677889999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
|||||......-... .... -...|.|||.+....++.++|+|+.|.+. +|.++.
T Consensus 347 FGLAr~~~d~~Y~~~-~~~k---------fPIkWtAPEa~~~~~FS~kSDVWSFGVlL-~E~fT~ 400 (468)
T KOG0197|consen 347 FGLARLIGDDEYTAS-EGGK---------FPIKWTAPEALNYGKFSSKSDVWSFGVLL-WELFTY 400 (468)
T ss_pred cccccccCCCceeec-CCCC---------CCceecCHHHHhhCCcccccceeehhhhH-HHHhcc
Confidence 999994332211111 1110 23469999999999999999999999765 666655
No 258
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.95 E-value=1.8e-26 Score=267.30 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=126.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++++.||.|+||.||+|.+. .++..+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEKQQLV--------SEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHHhcCCCccceeee
Confidence 5889999999999999999862 4678899999876544444444444 8999999999999999999
Q ss_pred EEEe--CCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCceEecCC
Q 000355 185 LLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLH-----SLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 185 ~~~~--~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH-----~~gIiHRDLKP~NILl~~~ 254 (1620)
++.. ...++++|||+++ +|.+++... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 8864 3578999999985 999999742 2456889999999999999999999 9999999999999999998
Q ss_pred CceEEEEeecCCcc
Q 000355 255 CWSWLYICDKPLVG 268 (1620)
Q Consensus 255 ~~~~lKL~DFGla~ 268 (1620)
+ .+||+|||+++
T Consensus 147 ~--~~kl~d~g~~~ 158 (265)
T cd08217 147 N--NVKLGDFGLAK 158 (265)
T ss_pred C--CEEEecccccc
Confidence 8 89999999987
No 259
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=5.5e-27 Score=272.50 Aligned_cols=147 Identities=19% Similarity=0.242 Sum_probs=128.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|+..+.||+|+||.||+|.+. .+++.+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHR------PTGKIMAVKTIRLEIN-EAIQKQIL--------RELDILHKCNSPYIVGFY 65 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEc------CCCcEEEEEEEecccC-hHHHHHHH--------HHHHHHHHCCCCchhhhh
Confidence 36888899999999999999862 4578899999876432 23333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+.+..++.+++||||++ ++|.+++.... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l 142 (265)
T cd06605 66 GAFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKL 142 (265)
T ss_pred eeeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 59999998432 678899999999999999999999 9999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||.+.
T Consensus 143 ~d~g~~~ 149 (265)
T cd06605 143 CDFGVSG 149 (265)
T ss_pred eecccch
Confidence 9999886
No 260
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.95 E-value=1.9e-26 Score=266.51 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=126.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCC---hhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|+..+.||+|+||+||+|.+. .++..+++|.+...... .+..+.+. +|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL------DDGDFFAVKEVSLADDGQTGQEAVKQLE--------QEIALLSKLQHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEc------CCCcEEEEEEEEEccccccchHHHHHHH--------HHHHHHHhcCCCCchh
Confidence 4778899999999999999862 35788999998654322 12223333 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++...+.+++||||+++ +|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~k 142 (258)
T cd06632 67 YLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142 (258)
T ss_pred eeeeEecCCeEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999985 99999973 45678999999999999999999999999999999999999998 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 143 l~d~~~~~ 150 (258)
T cd06632 143 LADFGMAK 150 (258)
T ss_pred EccCccce
Confidence 99999987
No 261
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=281.96 Aligned_cols=207 Identities=15% Similarity=0.137 Sum_probs=173.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..+.|..-++||+|+||+|+-|+- ..+|+.+|.|++.+.+......+.. +++|..||++++.+.||.
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqv------raTGKMYAcKkL~KKRiKkr~ge~m-------aLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQV------RATGKMYACKKLDKKRIKKRKGETM-------ALNEKQILEKVSSPFIVS 249 (591)
T ss_pred cccceeeeEEEecccccceeEEEE------ecchhhHHHHHHHHHHHHHhhhhHH-------hhHHHHHHHHhccCcEEE
Confidence 345788899999999999999874 2578999999987754433322221 359999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+-..|++++.+++||..|+| ||.-+|....+..+++..+++|+.+|+.||++||+.+||.|||||+|||+|+.| +++
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvR 327 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVR 327 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeE
Confidence 99999999999999999995 999888866667899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
|+|.|||....... + ...-.||..|||||++.+..|+...|+|+.||+. ||++-+..+|..|.
T Consensus 328 ISDLGLAvei~~g~-------~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCll-Yemi~G~sPFr~~K 390 (591)
T KOG0986|consen 328 ISDLGLAVEIPEGK-------P-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLL-YEMIAGHSPFRQRK 390 (591)
T ss_pred eeccceEEecCCCC-------c-----cccccCcccccCHHHHcCCcccCCccHHHHHhHH-HHHHcccCchhhhh
Confidence 99999998543211 1 1222489999999999999999999999999887 77776666665554
No 262
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.95 E-value=1.1e-26 Score=272.41 Aligned_cols=145 Identities=17% Similarity=0.209 Sum_probs=126.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
..|+.++.||.|+||.||+|.+. ..+..+|+|.+.... .......+. +|+++++.++||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDN------RTQQVVAIKIIDLEE-AEDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEc------cCCEEEEEEEEeccc-cHHHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46888899999999999999862 356889999987532 223333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++..++||||++| +|.+++. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~ 143 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEc
Confidence 999999999999999985 9999987 34578899999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 144 dfg~~~ 149 (277)
T cd06640 144 DFGVAG 149 (277)
T ss_pred ccccce
Confidence 999987
No 263
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.95 E-value=1.2e-26 Score=272.48 Aligned_cols=143 Identities=15% Similarity=0.133 Sum_probs=116.8
Q ss_pred ceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 111 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
.||+|+||.||+|.+. .+++.||+|.+.+........ ..+.. ...++++++...||||+++++++...
T Consensus 1 ~ig~g~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~ 69 (278)
T cd05606 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALN-----ERIMLSLVSTGDCPFIVCMSYAFHTP 69 (278)
T ss_pred CcccCCCeEEEEEEEe------cCCCEEEEEEeeccccccchhHHHHHH-----HHHHHHHHHhCCCCcEeeeeeeeecC
Confidence 4899999999999862 457899999987643322111 11221 00234455556899999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+.+++||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++
T Consensus 70 ~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~--~~kl~dfg~~~ 145 (278)
T cd05606 70 DKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLAC 145 (278)
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC--CEEEccCcCcc
Confidence 999999999985 9998887 456789999999999999999999999999999999999999998 89999999987
No 264
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=3.2e-27 Score=284.73 Aligned_cols=202 Identities=15% Similarity=0.108 Sum_probs=161.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++++. .+++.+|+|.+.+...........++ +|+.++..++|+||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK------HTERIYAMKILNKWEMLKRAETACFR-------EERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHhhHHHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 47999999999999999999862 35788999998653222222222222 789999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+|+||||++ |+|.+++... ...+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~ 144 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLA 144 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEE
Confidence 99999999999999998 5999999742 45689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-----cccccccccccccccchHHHHhhhhcc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-----~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
|||+++........ ......||+.|||||++.+ ..++.++|+|+.|++. |+++++..+|
T Consensus 145 DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil-~ell~g~~Pf 208 (331)
T cd05624 145 DFGSCLKMNQDGTV----------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM-YEMLYGETPF 208 (331)
T ss_pred eccceeeccCCCce----------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh-hhhhhCCCCc
Confidence 99999743211100 0111237889999998875 4678899999999876 6666544444
No 265
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.95 E-value=1.4e-26 Score=269.01 Aligned_cols=140 Identities=19% Similarity=0.259 Sum_probs=121.6
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCCE
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 191 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~~ 191 (1620)
||+|+||.||+|++. .+++.+|+|.+.+.........+.+. +|+++++.++||||+++++.+.+++.
T Consensus 1 lg~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK------SKNRTFALKCVKKRHIVETGQQEHIF-------SEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEEehhcchhhhHHHHHH-------HHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 699999999999972 35789999999765433322223232 89999999999999999999999999
Q ss_pred EEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 192 ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 192 ~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+++||||++ ++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+||+|||+++
T Consensus 68 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~--~~~l~df~~~~ 141 (262)
T cd05572 68 IYMLMEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVKLVDFGFAK 141 (262)
T ss_pred cEEEEecCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC--CEEEeeCCccc
Confidence 999999998 499999983 45689999999999999999999999999999999999999998 89999999987
No 266
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=3.6e-26 Score=273.39 Aligned_cols=151 Identities=17% Similarity=0.163 Sum_probs=128.9
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
+..+.|...+.||+|+||.||+|++. .++..+++|.+........ ....+. +|+++++.++||||
T Consensus 18 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i 83 (313)
T cd06633 18 DPEEIFVGLHEIGHGSFGAVYFATNS------HTNEVVAVKKMSYSGKQTNEKWQDII--------KEVKFLQQLKHPNT 83 (313)
T ss_pred CHHHHhhcceeeccCCCeEEEEEEEC------CCCcEEEEEEEeccccCchHHHHHHH--------HHHHHHHhCCCCCC
Confidence 33445778889999999999999862 4578999999875433222 223333 89999999999999
Q ss_pred cceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 180 APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
+++++++.+.+..|+||||+.++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 84 v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--~~ 160 (313)
T cd06633 84 IEYKGCYLKEHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QV 160 (313)
T ss_pred ccEEEEEEeCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--CE
Confidence 999999999999999999999999988874 345688999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcc
Q 000355 260 YICDKPLVG 268 (1620)
Q Consensus 260 KL~DFGla~ 268 (1620)
||+|||++.
T Consensus 161 kL~dfg~~~ 169 (313)
T cd06633 161 KLADFGSAS 169 (313)
T ss_pred EEeecCCCc
Confidence 999999876
No 267
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-28 Score=307.69 Aligned_cols=204 Identities=16% Similarity=0.134 Sum_probs=169.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.|.++++ ..++++||+|++.+..........+.+ .|-.+|..-+.+-|++|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~------k~t~~VYAMK~lnK~eMlKr~~tA~F~-------EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRH------KSTEKVYAMKILNKWEMLKRAETACFR-------EERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEe------eccccchhHHHhhHHHHhhchhHHHHH-------HHhHHHHcCCcHHHHHH
Confidence 46999999999999999999986 256799999999875444343344443 78899999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+..|+++.++|+|||||+| ||..++.. ...+++..+++|+..|+.||.-||+.|+|||||||+|||||..| ++||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikL 216 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKL 216 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEee
Confidence 9999999999999999995 99999983 34799999999999999999999999999999999999999999 9999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc----c-cccccccccccccccchHHHHhhhhcccC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----S-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~----~-~~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
+|||.+-.....+.. .+...+|||-|.+||++. + ..|+..||+|+.|.+. ||+|.+-.+|-.
T Consensus 217 ADFGsClkm~~dG~V----------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~-YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTV----------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFM-YEMLYGETPFYA 283 (1317)
T ss_pred ccchhHHhcCCCCcE----------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHH-HHHHcCCCcchH
Confidence 999988644322111 123445999999999986 2 5689999999999665 777766655544
No 268
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=3.9e-26 Score=263.20 Aligned_cols=148 Identities=23% Similarity=0.223 Sum_probs=129.7
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+++|.+............+. +|+++++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDAL--------NEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc------CCCcEEEEEEeecccCChHHHHHHH--------HHHHHHHhcCCCChhheEE
Confidence 5889999999999999999972 3578899999976544333334444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
.+...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l 144 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKL 144 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEE
Confidence 99999999999999995 9999998532 46789999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 145 ~d~~~~~ 151 (258)
T cd08215 145 GDFGISK 151 (258)
T ss_pred CCcccee
Confidence 9999887
No 269
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.95 E-value=4.6e-26 Score=264.40 Aligned_cols=146 Identities=23% Similarity=0.264 Sum_probs=128.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+|+|.+............+. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL------DTGELMAVKEIRIQDNDPKTIKEIA--------DEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC------CCCcEEEEEEEECcccchHHHHHHH--------HHHHHHHhCCCCChhheee
Confidence 5889999999999999999862 3578899999976544323334444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+.+++|+||+++ +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d 142 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGD 142 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999995 9999998 345578889999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||++.
T Consensus 143 ~g~~~ 147 (264)
T cd06626 143 FGCAV 147 (264)
T ss_pred ccccc
Confidence 99987
No 270
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=1.8e-26 Score=269.59 Aligned_cols=142 Identities=18% Similarity=0.138 Sum_probs=116.4
Q ss_pred CCCeeeeece--eeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccc
Q 000355 103 MTALFPIAFI--GICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 179 (1620)
Q Consensus 103 ~~~y~~~~~L--G~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNI 179 (1620)
.++|++.+.+ |+|+||.||++.+. .++..+|+|.+....... .|+.....+ +||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~---------------~e~~~~~~~~~h~~i 71 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHK------PTQKLFVQKIIKAKNFNA---------------IEPMVHQLMKDNPNF 71 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEc------CCCcEEEEEEEehhhcch---------------hhHHHHHHhhcCCCE
Confidence 4466666665 99999999999862 457889999986532211 122222222 69999
Q ss_pred cceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++++.|..++.+|+||||++ ++|.+++.. ...+++..++.++.||++||.|||++||+||||||+||+++.++. .
T Consensus 72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~ 148 (267)
T PHA03390 72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD-R 148 (267)
T ss_pred EEEEEEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCC-e
Confidence 999999999999999999998 599999983 347899999999999999999999999999999999999988762 6
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
++|+|||+++
T Consensus 149 ~~l~dfg~~~ 158 (267)
T PHA03390 149 IYLCDYGLCK 158 (267)
T ss_pred EEEecCccce
Confidence 9999999887
No 271
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.94 E-value=2.4e-26 Score=269.98 Aligned_cols=146 Identities=25% Similarity=0.294 Sum_probs=126.6
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|+||.||+|.+. .+++.+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK------KTGELVALKKIRMENEKEGFPITAI--------REIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC------CCCeEEEEEEEecccccccchHHHH--------HHHHHHHhccCCCeeeheee
Confidence 678899999999999999862 3578999999986532222222333 89999999999999999999
Q ss_pred EEeC--CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 186 LKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 186 ~~~~--~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+... +..++||||++++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+|||+++++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~--~~~l~d 143 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDHDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLAD 143 (287)
T ss_pred EecCCCCcEEEEeccccccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC--CEEEcc
Confidence 9988 899999999999999998742 35789999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 144 ~g~~~ 148 (287)
T cd07840 144 FGLAR 148 (287)
T ss_pred cccee
Confidence 99987
No 272
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.94 E-value=4.4e-26 Score=265.85 Aligned_cols=141 Identities=23% Similarity=0.291 Sum_probs=119.3
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
...||+|+||.||+|.+ ..++..+|+|.+... .......+. +|+.+++.++||||+++++++..
T Consensus 13 ~~~lg~g~~g~v~~~~~------~~~~~~v~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~ 76 (268)
T cd06624 13 RVVLGKGTYGIVYAARD------LSTQVRIAIKEIPER--DSRYVQPLH--------EEIALHSYLKHRNIVQYLGSDSE 76 (268)
T ss_pred eEEEecCCceEEEEeEe------cCCCcEEEEEEecCC--CHHHHHHHH--------HHHHHHHhcCCCCeeeeeeeecc
Confidence 35899999999999986 145788999988653 222333444 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC-CCceEEEEeec
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDK 264 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~~~~~lKL~DF 264 (1620)
++..++||||+++ +|.+++... ...+ ++..+..++.||+.||.|||++||+||||||+||+++. ++ .+||+||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~--~~~l~df 153 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG--VVKISDF 153 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--eEEEecc
Confidence 9999999999985 999999742 2334 77888899999999999999999999999999999986 45 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|++.
T Consensus 154 g~~~ 157 (268)
T cd06624 154 GTSK 157 (268)
T ss_pred hhhe
Confidence 9987
No 273
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.9e-26 Score=271.56 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=127.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||++.+ ..++..+|+|++.... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~------~~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKH------IPTGTVMAKKVVHIGA-KSSVRKQIL--------RELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEE------cCCCcEEEEEEEEecC-cchHHHHHH--------HHHHHHHHcCCCCcceE
Confidence 35799999999999999999986 2457889999886532 222233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++++...+.+++||||+++ +|.+++. ..+.++...++.++.|++.||.|||+ ++|+||||||+||+++.++ .++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEE
Confidence 9999999999999999995 9998887 34568899999999999999999997 6999999999999999998 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 145 l~d~gl~~ 152 (284)
T cd06620 145 LCDFGVSG 152 (284)
T ss_pred EccCCccc
Confidence 99999876
No 274
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=4.9e-26 Score=268.51 Aligned_cols=148 Identities=19% Similarity=0.248 Sum_probs=125.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|+..+.||.|++|.||+|.+. .+++.+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK------NTGMIFALKTITTDPN-PDLQKQIL--------RELEINKSCKSPYIVKYY 65 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC------CCCeEEEEEEEecCCc-hHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 46899999999999999999972 3578899999875422 22333444 899999999999999999
Q ss_pred eEEEeC--CEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 184 GLLKTS--GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 184 ~~~~~~--~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++|... +.+|+||||+++ +|.+++.. .....+++..+..++.||+.||.|||++|++||||+|+||+++.++ .
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~--~ 143 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG--Q 143 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC--e
Confidence 998654 479999999985 99888753 2345678999999999999999999999999999999999999998 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||++.
T Consensus 144 ~~l~dfg~~~ 153 (287)
T cd06621 144 VKLCDFGVSG 153 (287)
T ss_pred EEEeeccccc
Confidence 9999999986
No 275
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=8.5e-27 Score=273.33 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=125.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.|+..+.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDN------RTKEVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEc------CCCeEEEEEEeccccc-hHHHHHHH--------HHHHHHHcCCCCccHhhh
Confidence 45778899999999999999862 4568899999865322 22223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..++..|+||||+++ +|.+++. ...+++..++.++.||+.||.|||++||+|+||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~ 143 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEc
Confidence 999999999999999995 9998886 34678999999999999999999999999999999999999988 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 144 dfg~~~ 149 (277)
T cd06642 144 DFGVAG 149 (277)
T ss_pred cccccc
Confidence 999987
No 276
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.94 E-value=2.2e-26 Score=266.97 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=117.1
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHh-hccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSV-PGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~i-L~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|.+. .+++.+|+|.+.+...... ...... .|..+ ....+||||+++++++.
T Consensus 2 ~~l~~g~~~~v~~a~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~e~~~~~~~~~~~~i~~~~~~~~ 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKR------STGDYFAIKVLKKSDMIAKNQVTNVK--------AERAIMMIQGESPYVAKLYYSFQ 67 (260)
T ss_pred ccCCcCCCeeEEEEEec------CCCCeEEEEEecchhhhHHHHHHHHH--------HHHHHHhhcCCCCCeeeeeeeEE
Confidence 67999999999999862 3568899999865432221 112222 45444 34558999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++.+|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~ 143 (260)
T cd05611 68 SKDYLYLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLKLTDFGL 143 (260)
T ss_pred cCCeEEEEEeccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEeeccc
Confidence 99999999999985 99999973 45689999999999999999999999999999999999999988 899999998
Q ss_pred cc
Q 000355 267 VG 268 (1620)
Q Consensus 267 a~ 268 (1620)
++
T Consensus 144 ~~ 145 (260)
T cd05611 144 SR 145 (260)
T ss_pred ce
Confidence 87
No 277
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=3.3e-26 Score=268.44 Aligned_cols=145 Identities=18% Similarity=0.199 Sum_probs=125.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+-|+..+.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~------~~~~~~aiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 68 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDN------RTQKVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEEC------CCCcEEEEEEeccccc-hHHHHHHH--------HHHHHHHhcCCCCEeEEE
Confidence 34778899999999999999862 3578999999865322 22223343 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++..++..|+||||+++ +|.+++. ...++...+..++.|++.|+.|||++|++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~--~~~l~ 143 (277)
T cd06641 69 GSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLA 143 (277)
T ss_pred EEEEeCCeEEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC--CEEEe
Confidence 999999999999999995 8998886 34678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcc
Q 000355 263 DKPLVG 268 (1620)
Q Consensus 263 DFGla~ 268 (1620)
|||+++
T Consensus 144 dfg~~~ 149 (277)
T cd06641 144 DFGVAG 149 (277)
T ss_pred ecccce
Confidence 999887
No 278
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.94 E-value=4.7e-27 Score=283.09 Aligned_cols=198 Identities=14% Similarity=0.183 Sum_probs=160.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.++..........+.++ +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~~~~i~~~~ 67 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREK------ATGDIYAMKVMKKSVLLAQETVSFFE-------EERDILSISNSPWIPQLQ 67 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCccee
Confidence 46999999999999999999862 45789999999764332222333333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+.+.+|+||||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~ 144 (330)
T cd05601 68 YAFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLA 144 (330)
T ss_pred eEEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEec
Confidence 99999999999999998 5999999842 35789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc------ccccccccccccccccchHHHHhh
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ------SMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~------~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
|||+++........ ......||+.|+|||++. ...|+.++|+|+.|+|. |+++++
T Consensus 145 Dfg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il-~el~~g 205 (330)
T cd05601 145 DFGSAARLTANKMV----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIA-YEMIYG 205 (330)
T ss_pred cCCCCeECCCCCce----------eeecccCCccccCHHHhccccccccCCCCCcceeeccccee-eeeccC
Confidence 99999853211110 011224788999999986 56678899999999876 444433
No 279
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=1.4e-26 Score=272.88 Aligned_cols=148 Identities=20% Similarity=0.243 Sum_probs=124.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
++|+..+.||+|+||.||++.+. .++..+|+|.+...... .....+. +|+.++.++. ||||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~~~~~~~iv~~ 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK------PSGTIMAVKRIRSTVDE-KEQKRLL--------MDLDVVMRSSDCPYIVKF 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC------CCCCEEEEEEehhccCh-HHHHHHH--------HHHHHHHHhcCCCCEeee
Confidence 46777889999999999999862 45789999998754322 2333344 8999999996 9999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHh---hCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceE
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQ---FSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~---~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
++++..++..+++|||+++++.++.. ......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .
T Consensus 69 ~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~ 146 (288)
T cd06616 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--N 146 (288)
T ss_pred eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--c
Confidence 99999999999999999987666543 2234678999999999999999999998 5999999999999999988 8
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 147 ~kl~dfg~~~ 156 (288)
T cd06616 147 IKLCDFGISG 156 (288)
T ss_pred EEEeecchhH
Confidence 9999999987
No 280
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94 E-value=2.2e-26 Score=269.33 Aligned_cols=148 Identities=23% Similarity=0.225 Sum_probs=128.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|++......... ...+. +|+++++.++ ||||++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~~i~~ 66 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEK------ETNKEYAIKILDKRQLIKEKKVKYVK--------IEKEVLTRLNGHPGIIK 66 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEc------CCCCEEEEEEechHhccchHHHHHHH--------HHHHHHHhcccCCCchh
Confidence 47999999999999999999862 46789999998764332222 22333 8999999998 999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++.+++||||++ ++|.+++.. .+.+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~--~~~ 142 (280)
T cd05581 67 LYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIK 142 (280)
T ss_pred HHHHhcCCceEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEE
Confidence 9999999999999999996 699999983 45789999999999999999999999999999999999999998 899
Q ss_pred EeecCCccc
Q 000355 261 ICDKPLVGF 269 (1620)
Q Consensus 261 L~DFGla~~ 269 (1620)
|+|||++..
T Consensus 143 l~df~~~~~ 151 (280)
T cd05581 143 ITDFGTAKV 151 (280)
T ss_pred ecCCccccc
Confidence 999999984
No 281
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.8e-28 Score=263.92 Aligned_cols=206 Identities=18% Similarity=0.176 Sum_probs=173.7
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 178 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpN 178 (1620)
.-...+|.++++||+|+|++|.+++.. .+.+++|+|++++.-....+..++++ .|..+.... +||.
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~------~t~qiyamkvvkkel~nddedidwvq-------tek~vfe~asn~pf 312 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLK------KTDQIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNNPF 312 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehc------ccceeeehhhHHHHhcCCcccchhHH-------hhHHHHHhccCCCe
Confidence 334679999999999999999998863 35689999999987666655556665 677766555 7999
Q ss_pred ccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 179 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+|-|+.+|+++..+++|.||.+| +|.-.++ +.+.++++++++|..+|+.||.|||++|||.||||.+|+||+..|
T Consensus 313 lvglhscfqtesrlffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg-- 388 (593)
T KOG0695|consen 313 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG-- 388 (593)
T ss_pred EEehhhhhcccceEEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC--
Confidence 99999999999999999999995 8887777 567899999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
++||+|+|+++........+ ++.| |||.|.|||++.+..|+..+|+|..|. ..+++.+||++
T Consensus 389 hikltdygmcke~l~~gd~t----------stfc-gtpnyiapeilrgeeygfsvdwwalgv-------lmfemmagrsp 450 (593)
T KOG0695|consen 389 HIKLTDYGMCKEGLGPGDTT----------STFC-GTPNYIAPEILRGEEYGFSVDWWALGV-------LMFEMMAGRSP 450 (593)
T ss_pred ceeecccchhhcCCCCCccc----------cccc-CCCcccchhhhcccccCceehHHHHHH-------HHHHHHcCCCC
Confidence 99999999999654332211 2334 599999999999999999999999994 45667789987
Q ss_pred CCC
Q 000355 338 GDY 340 (1620)
Q Consensus 338 ~dl 340 (1620)
.|+
T Consensus 451 fdi 453 (593)
T KOG0695|consen 451 FDI 453 (593)
T ss_pred cce
Confidence 664
No 282
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=3.8e-26 Score=267.56 Aligned_cols=144 Identities=16% Similarity=0.278 Sum_probs=124.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC---cccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~---HpNIv~ 181 (1620)
.|+..+.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+++++.++ ||||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV------PTGRVVALKIINLDT-PDDDVSDIQ--------REVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc------CCCcEEEEEEecCCC-CchhHHHHH--------HHHHHHHHhccCCCCCeee
Confidence 4788899999999999999962 457899999986532 222333344 7999988886 999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++..++..++||||++| +|.++++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++ .++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~--~~~ 141 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG--NVK 141 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC--CEE
Confidence 99999999999999999985 99998873 3688999999999999999999999999999999999999988 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||++.
T Consensus 142 l~dfg~~~ 149 (277)
T cd06917 142 LCDFGVAA 149 (277)
T ss_pred EccCCcee
Confidence 99999987
No 283
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.94 E-value=4.1e-27 Score=284.51 Aligned_cols=203 Identities=17% Similarity=0.167 Sum_probs=158.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+... ....++..||+|++.... .......+. +|+.+|+.+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGI-DKKSSCNTVAVKMLKEGA-TASEHKALM--------SELKILIHIGNHLNVVN 75 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEecc-CCcccchhhheecccccc-chHHHHHHH--------HHHHHHHHhccCcceee
Confidence 46899999999999999999985211 112456789999987532 222333444 899999999 8999999
Q ss_pred eeeEEEeCC-EEEEEEeCCC-CCHHHHHhhCC------------------------------------------------
Q 000355 182 VLGLLKTSG-LITSVIPKTP-YTLENILQFSP------------------------------------------------ 211 (1620)
Q Consensus 182 l~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------ 211 (1620)
+++++...+ .+++||||++ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 999887654 6899999999 59999997421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCC
Q 000355 212 ------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 279 (1620)
Q Consensus 212 ------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~ 279 (1620)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~-- 231 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV-- 231 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchh--
Confidence 12467788889999999999999999999999999999999988 89999999998432111000
Q ss_pred CCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 280 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 280 ~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
......+++.|||||++.+..|+.++|+|+.|++. |++++
T Consensus 232 -------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il-~el~~ 271 (338)
T cd05102 232 -------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL-WEIFS 271 (338)
T ss_pred -------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH-HHHHh
Confidence 01123356789999999999999999999999776 55553
No 284
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=3.9e-26 Score=264.77 Aligned_cols=146 Identities=21% Similarity=0.250 Sum_probs=128.6
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.+++|++...... .....+. +|+.++..++||||++++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~vk~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHK------PTGKIYALKKIHVDGDE-EFRKQLL--------RELKTLRSCESPYVVKCY 65 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEc------CCCcEEEEEEeccCcch-HHHHHHH--------HHHHHHHhcCCCCeeeEE
Confidence 36889999999999999999872 35789999998764322 2233444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEE
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++...+.+++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l 141 (264)
T cd06623 66 GAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKI 141 (264)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 599999984 3678999999999999999999999 9999999999999999998 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 142 ~df~~~~ 148 (264)
T cd06623 142 ADFGISK 148 (264)
T ss_pred ccCccce
Confidence 9999887
No 285
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=6.8e-26 Score=282.59 Aligned_cols=255 Identities=20% Similarity=0.371 Sum_probs=220.5
Q ss_pred EEEEcCCCCEEEEeCC-CceeEE-eecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeE
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~-g~~l~t-l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~s 1320 (1620)
+.+++.|.++++||.. +..+.+ +.||.+.|++++|..-+.++++||. |+|+|+||..+|+|..++.||.+.|.+
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~----D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGST----DKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEec----CCcEEeEecCCCcEEEEecCCCceEEE
Confidence 8999999999999987 777777 9999999999999987889999997 999999999999999999999999999
Q ss_pred EEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCce
Q 000355 1321 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1398 (1620)
Q Consensus 1321 V~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1398 (1620)
+... ...+ +|.|.+|++||+.+|+++.++.+|. +. |
T Consensus 297 ~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~------------------------------~~----------V 334 (537)
T KOG0274|consen 297 LTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHT------------------------------GP----------V 334 (537)
T ss_pred EEcc--CceEeeccCCceEEEEeccCcceEEEecccc------------------------------cc----------E
Confidence 9853 3334 5579999999999999999887642 23 4
Q ss_pred EEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcE
Q 000355 1399 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1478 (1620)
Q Consensus 1399 t~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I 1478 (1620)
.|+..+ +..+++|+.|++|++||+.++++++++.+|.. .|.++.+.+. +.+++|+.|++|
T Consensus 335 ~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~------~V~sl~~~~~------------~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 335 NCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTG------RVYSLIVDSE------------NRLLSGSLDTTI 394 (537)
T ss_pred EEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcc------eEEEEEecCc------------ceEEeeeeccce
Confidence 444444 67999999999999999999999999997654 5788765321 589999999999
Q ss_pred EEEECCCC-cEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeec-CCCCEEEEeecCCEEEEEe
Q 000355 1479 RLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG-HTNGISGFSVWGQDVISIS 1556 (1620)
Q Consensus 1479 ~lwD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g-H~~~V~afSpdg~~LaSgs 1556 (1620)
++||++++ +++.++.+|..-|..+. ..++.|+|++.|++|++||..++ .++.++.+ |...|.++......+++++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~-~~~~~Lvs~~aD~~Ik~WD~~~~--~~~~~~~~~~~~~v~~l~~~~~~il~s~ 471 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLL-LRDNFLVSSSADGTIKLWDAEEG--ECLRTLEGRHVGGVSALALGKEEILCSS 471 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccc-cccceeEeccccccEEEeecccC--ceeeeeccCCcccEEEeecCcceEEEEe
Confidence 99999999 99999999999997765 34779999999999999999998 67778888 7788988777777788888
Q ss_pred CCc-eEEEecc
Q 000355 1557 NNK-IGLSSLS 1566 (1620)
Q Consensus 1557 ~D~-I~vwdl~ 1566 (1620)
.|+ +++||+.
T Consensus 472 ~~~~~~l~dl~ 482 (537)
T KOG0274|consen 472 DDGSVKLWDLR 482 (537)
T ss_pred cCCeeEEEecc
Confidence 888 9999987
No 286
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=2.6e-26 Score=274.37 Aligned_cols=144 Identities=19% Similarity=0.205 Sum_probs=119.3
Q ss_pred eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
.+.+.+|.|+++.|+++. .+++.+|+|++............+. +|+++++.++||||+++++++
T Consensus 5 ~i~~~~~~~~~v~~~~~~--------~~~~~~avK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i~~~~~~~ 68 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHK--------PTNTLVAVKKINLDSCSKEDLKLLQ--------QEIITSRQLQHPNILPYVTSF 68 (314)
T ss_pred hhhHhhcCCceEEEEEec--------CCCCEEEEEEEeccccchhHHHHHH--------HHHHHHHhcCCcchhhhhhee
Confidence 344455555555555543 3678999999976533333344444 899999999999999999999
Q ss_pred EeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 187 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 187 ~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
..++..+++|||++ ++|.+++.......+++..++.+++|+++||+|||+++|+||||||+|||++.++ .+||+|||
T Consensus 69 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~--~~kl~d~~ 146 (314)
T cd08216 69 IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG--KVVLSGLR 146 (314)
T ss_pred ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC--ceEEecCc
Confidence 99999999999999 5999999854455688999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
.+.
T Consensus 147 ~~~ 149 (314)
T cd08216 147 YSV 149 (314)
T ss_pred cce
Confidence 887
No 287
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=6.2e-26 Score=267.56 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=123.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|...+.||+|++|.||++.+. .++..+++|.+.... ......+. +|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~--~~~~~~~~--------~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK------STGRQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC------CCCCEEEEEEEeccc--hhHHHHHH--------HHHHHHHHcCCCChheEEE
Confidence 4555679999999999999862 356889999886422 22223333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++...+..++|+||++| +|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~d 158 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG--RVKLSD 158 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC--cEEEcc
Confidence 99999999999999985 99999873 5678999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 159 ~g~~~ 163 (285)
T cd06648 159 FGFCA 163 (285)
T ss_pred cccch
Confidence 99876
No 288
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94 E-value=2.8e-26 Score=271.70 Aligned_cols=145 Identities=15% Similarity=0.134 Sum_probs=125.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~ 81 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV------ATGQEVAIKQMNLQQQ--PKKELII--------NEILVMRENKHPNIVNY 81 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc------CCCCEEEEEEeccccc--hHHHHHH--------HHHHHHhhcCCCCeeeh
Confidence 578999999999999999999852 3567899999864322 2223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..|+|+||+++ +|.+++. ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL 156 (293)
T cd06647 82 LDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 156 (293)
T ss_pred hheeeeCCcEEEEEecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEE
Confidence 9999999999999999985 9999987 33578889999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 157 ~dfg~~~ 163 (293)
T cd06647 157 TDFGFCA 163 (293)
T ss_pred ccCccee
Confidence 9999887
No 289
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=1.7e-26 Score=270.85 Aligned_cols=146 Identities=23% Similarity=0.272 Sum_probs=127.2
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|++|.||+|.+. .+++.+++|.+............+. +|+++|+.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK------LTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcC------CCCcEEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCcchHHHh
Confidence 677889999999999999862 4578899999876433322233343 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 186 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+..++.+++||||++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l~df~ 143 (283)
T cd05118 67 FRHKGDLYLVFEFMDTDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFG 143 (283)
T ss_pred hccCCCEEEEEeccCCCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC--cEEEeeee
Confidence 9999999999999999999998742 35789999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
.+.
T Consensus 144 ~~~ 146 (283)
T cd05118 144 LAR 146 (283)
T ss_pred eeE
Confidence 887
No 290
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.94 E-value=1.4e-26 Score=246.13 Aligned_cols=278 Identities=18% Similarity=0.270 Sum_probs=224.7
Q ss_pred EEeecccCcEEEEEEcc---CCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcE
Q 000355 1263 SSIRAHHGALRSVAVGQ---DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTL 1337 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafsp---dg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV 1337 (1620)
.+..||+.+|-.++||| +|-+|+|++. |+.--+-+-+||.-+.+|.||.++|++.+.+.+..+. ++.|-+.
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~k----d~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadfta 83 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASK----DGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTA 83 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEecc----CCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchh
Confidence 35679999999999984 8899999998 8988888999999999999999999999986665555 4559999
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCC
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1417 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dg 1417 (1620)
++||.-+|..+..|... +.|..++|+.|.+.+++|+.++
T Consensus 84 kvw~a~tgdelhsf~hk-----------------------------------------hivk~~af~~ds~~lltgg~ek 122 (334)
T KOG0278|consen 84 KVWDAVTGDELHSFEHK-----------------------------------------HIVKAVAFSQDSNYLLTGGQEK 122 (334)
T ss_pred hhhhhhhhhhhhhhhhh-----------------------------------------heeeeEEecccchhhhccchHH
Confidence 99999999988777632 2356677777899999999999
Q ss_pred cEEEEECCCCc-eeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccC
Q 000355 1418 SLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1496 (1620)
Q Consensus 1418 tVrlwDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~ 1496 (1620)
-+|++|+...+ +...+.+ |+..|+.+-|+.+. +.|++.+.|++||+||.+||+.++++. ..
T Consensus 123 llrvfdln~p~App~E~~g------htg~Ir~v~wc~eD-----------~~iLSSadd~tVRLWD~rTgt~v~sL~-~~ 184 (334)
T KOG0278|consen 123 LLRVFDLNRPKAPPKEISG------HTGGIRTVLWCHED-----------KCILSSADDKTVRLWDHRTGTEVQSLE-FN 184 (334)
T ss_pred HhhhhhccCCCCCchhhcC------CCCcceeEEEeccC-----------ceEEeeccCCceEEEEeccCcEEEEEe-cC
Confidence 99999997653 3445554 45568888888544 578888999999999999999999998 57
Q ss_pred CcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCC
Q 000355 1497 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADED 1572 (1620)
Q Consensus 1497 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~ 1572 (1620)
.+|+++. +++|++|.+ ...++|+.||..+- ..+..++-. -.|. +++|+...++.|+.|. ++.||+. +
T Consensus 185 s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf--~~lKs~k~P-~nV~SASL~P~k~~fVaGged~~~~kfDy~-----T 255 (334)
T KOG0278|consen 185 SPVTSLEVSQDGRILTI-AYGSSVKFWDAKSF--GLLKSYKMP-CNVESASLHPKKEFFVAGGEDFKVYKFDYN-----T 255 (334)
T ss_pred CCCcceeeccCCCEEEE-ecCceeEEeccccc--cceeeccCc-cccccccccCCCceEEecCcceEEEEEecc-----C
Confidence 8899999 999987655 45778999999886 333333322 2233 4999999999999999 9999986 3
Q ss_pred CcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1573 GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1573 g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
|..... ... +|-++|-++.|+|||...|+||+||+||||.
T Consensus 256 geEi~~------~nk--gh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 256 GEEIGS------YNK--GHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred Cceeee------ccc--CCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 332111 112 5899999999999999999999999999993
No 291
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=8.3e-26 Score=264.83 Aligned_cols=280 Identities=18% Similarity=0.229 Sum_probs=239.5
Q ss_pred EEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEE
Q 000355 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVW 1340 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IW 1340 (1620)
+++..|+..|.+|.|+|....++++- |.|+|.||+.+|...++.+.-..-+|.+..|...-+.+ +|.|..|+|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~L----ynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVf 82 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAAL----YNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVF 82 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEee----ecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEE
Confidence 45566999999999999999999887 58999999999999999999889999999999888877 6669999999
Q ss_pred eCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEE
Q 000355 1341 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1420 (1620)
Q Consensus 1341 D~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVr 1420 (1620)
+..|++.+.+|..|+ +.+.|++++|...+++++|.|-+|+
T Consensus 83 nynt~ekV~~FeAH~----------------------------------------DyIR~iavHPt~P~vLtsSDDm~iK 122 (794)
T KOG0276|consen 83 NYNTGEKVKTFEAHS----------------------------------------DYIRSIAVHPTLPYVLTSSDDMTIK 122 (794)
T ss_pred ecccceeeEEeeccc----------------------------------------cceeeeeecCCCCeEEecCCccEEE
Confidence 999999999998653 3477888888899999999999999
Q ss_pred EEECCCC-ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1421 FIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1421 lwDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
+||-..+ .+.+++.|| ...|.+|+|.|. |.+.+|++|-|++|++|.+.+..+..+++||...|
T Consensus 123 lW~we~~wa~~qtfeGH------~HyVMqv~fnPk----------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGV 186 (794)
T KOG0276|consen 123 LWDWENEWACEQTFEGH------EHYVMQVAFNPK----------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGV 186 (794)
T ss_pred EeeccCceeeeeEEcCc------ceEEEEEEecCC----------CccceeeeeccccEEEEEcCCCCCceeeeccccCc
Confidence 9998764 677888875 456899999863 44899999999999999999999999999999999
Q ss_pred EEEE-eC--CCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCC
Q 000355 1500 TKLA-AP--EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDG 1573 (1620)
Q Consensus 1500 ~sva-sp--dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1573 (1620)
+||. -+ |..+|+||++|.+|+|||.++. .++.++.||+..|++ |.|.-..++|||.|| +++|+...
T Consensus 187 N~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk--~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~T------ 258 (794)
T KOG0276|consen 187 NCVDYYTGGDKPYLISGADDLTIKVWDYQTK--SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKT------ 258 (794)
T ss_pred ceEEeccCCCcceEEecCCCceEEEeecchH--HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcc------
Confidence 9999 33 4459999999999999999998 788899999999994 888899999999999 99999531
Q ss_pred cceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1574 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1574 ~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
- ...+.... ....|++++-.+.++.+++|.++|.|-|
T Consensus 259 -y--~lE~tLn~-----gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 259 -Y--KLEKTLNY-----GLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred -e--ehhhhhhc-----CCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 1 11111111 2346999999999999999999998754
No 292
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94 E-value=7.8e-27 Score=280.09 Aligned_cols=194 Identities=21% Similarity=0.220 Sum_probs=155.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHH-HhhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei-~iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||.||+|++. .+++.+|+|++.+...... ...++. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIM--------AERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH--------HHHHHHHHhCCCCCccceeeEEE
Confidence 47999999999999962 4678999999875432221 222333 455 4678899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+||||+.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~ 142 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhccc
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
++...... .. .....||+.|+|||++.+..|+.++|+|+.|++. |+++.+..+|.
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~ 197 (321)
T cd05603 143 CKEGVEPE-----ET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVL-YEMLYGLPPFY 197 (321)
T ss_pred CccCCCCC-----Cc------cccccCCcccCCHHHhcCCCCCCcCcccccchhh-hhhhcCCCCCC
Confidence 88422111 00 1122368899999999999999999999999877 66665544443
No 293
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94 E-value=8.2e-27 Score=280.43 Aligned_cols=193 Identities=20% Similarity=0.206 Sum_probs=155.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHH-hhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~-iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+|+.+|+|++.+..... .....+. +|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK------LDGKCYAVKVLQKKIVLNRKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHHhCCCCCCccEEEEEe
Confidence 47999999999999862 467899999987542222 2222333 5554 577899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
.++.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~ 142 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGL 142 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcc
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
++....... ......||+.|||||++.+..|+.++|+|+.|++. |+++++..+|
T Consensus 143 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~~G~~pf 196 (325)
T cd05604 143 CKEGIAQSD-----------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVL-YEMLYGLPPF 196 (325)
T ss_pred cccCCCCCC-----------CcccccCChhhCCHHHHcCCCCCCcCcccccccee-hhhhcCCCCC
Confidence 974221110 01123378899999999999999999999999887 6666554444
No 294
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.94 E-value=6.6e-26 Score=271.60 Aligned_cols=149 Identities=16% Similarity=0.170 Sum_probs=128.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|+..+.||+|+||.||++++ ..++..+|+|.+....... +....+. +|+++++.++||||++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~------~~~~~~valK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARD------VRTNEVVAIKKMSYSGKQSNEKWQDII--------KEVKFLQRIKHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEE------cCCCcEEEEEEEecCCCCchHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 44588899999999999999986 2357899999987543322 2223344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++++..++..++||||++|+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 90 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--~~kl 166 (317)
T cd06635 90 YKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 166 (317)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--CEEE
Confidence 9999999999999999999999888864 345688999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 167 ~dfg~~~ 173 (317)
T cd06635 167 ADFGSAS 173 (317)
T ss_pred ecCCCcc
Confidence 9999876
No 295
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.94 E-value=8.1e-27 Score=281.35 Aligned_cols=202 Identities=14% Similarity=0.088 Sum_probs=161.0
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++++. ..++.+|+|.+.+...........++ +|+.++..++|+||++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK------NADKVFAMKILNKWEMLKRAETACFR-------EERDVLVNGDNQWITTLH 67 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHHhhHHHHHH-------HHHHHHhhCCCCCEeeEE
Confidence 47999999999999999999862 35688999998653222222222232 799999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+.+.+|+||||++ |+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~ 144 (332)
T cd05623 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLA 144 (332)
T ss_pred EEEecCCEEEEEEeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 599999974 245689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-----ccccccccccccccccchHHHHhhhhcc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-----~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
|||+++........ ......||+.|||||++. ...|+.++|+|+.|++. |+++++..+|
T Consensus 145 DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil-~ell~g~~Pf 208 (332)
T cd05623 145 DFGSCLKLMEDGTV----------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCM-YEMLYGETPF 208 (332)
T ss_pred ecchheecccCCcc----------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHH-HHHhcCCCCC
Confidence 99999743211100 011234789999999886 34688899999999776 6666544444
No 296
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.6e-26 Score=263.87 Aligned_cols=135 Identities=20% Similarity=0.202 Sum_probs=116.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-----c--
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-----H-- 176 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-----H-- 176 (1620)
.+|.+.++||-|-|++||+|.| ....+.||+|+.+...... + .++.||++|++++ |
T Consensus 78 gRY~v~rKLGWGHFSTVWLawD------tq~~r~VAlKVvKSAqhYt---E--------aAlDEIklL~~v~~~Dp~~~~ 140 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWD------TQNKRYVALKVVKSAQHYT---E--------AALDEIKLLQQVREGDPNDPG 140 (590)
T ss_pred ceEEEEEeccccccceeEEEee------ccCCeEEEEEEEehhhHHH---H--------HHHHHHHHHHHHHhcCCCCCC
Confidence 5899999999999999999998 2456899999986533222 1 2458999999984 3
Q ss_pred -ccccceeeEEEeC----CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceE
Q 000355 177 -PNVAPVLGLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVL 250 (1620)
Q Consensus 177 -pNIv~l~~~~~~~----~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NIL 250 (1620)
..||+|++.|... .+++||+|+++.+|..+|+++..+.++...++.|++|||.||.|||+ .||||-||||+|||
T Consensus 141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL 220 (590)
T KOG1290|consen 141 KKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL 220 (590)
T ss_pred CceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence 3699999999865 39999999999999999999888899999999999999999999998 79999999999999
Q ss_pred ecCCC
Q 000355 251 LTDSC 255 (1620)
Q Consensus 251 l~~~~ 255 (1620)
+..+.
T Consensus 221 l~~~e 225 (590)
T KOG1290|consen 221 LCSTE 225 (590)
T ss_pred eeccc
Confidence 97663
No 297
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94 E-value=3.2e-26 Score=268.87 Aligned_cols=146 Identities=21% Similarity=0.208 Sum_probs=125.6
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccceee
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 184 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l~~ 184 (1620)
|++.+.||+|+||+||+|... .+++.++||.+...... ....... +|+..+++++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~-~~~~~~~--------~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNK------ETGELVAIKKMKKKFYS-WEECMNL--------REVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEEC------CCCcEEEEEEehhhccc-hhHHHHH--------HHHHHHHhccCCCCchhHHH
Confidence 678899999999999999962 34688999998653222 1111222 7999999999 999999999
Q ss_pred EEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 185 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
++..++..++||||++|+|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++ .+||+||
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~--~~~l~d~ 143 (283)
T cd07830 66 VFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE--VVKIADF 143 (283)
T ss_pred HhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--CEEEeec
Confidence 99999999999999988999999854445789999999999999999999999999999999999999988 8999999
Q ss_pred CCcc
Q 000355 265 PLVG 268 (1620)
Q Consensus 265 Gla~ 268 (1620)
|+++
T Consensus 144 ~~~~ 147 (283)
T cd07830 144 GLAR 147 (283)
T ss_pred ccce
Confidence 9887
No 298
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-26 Score=280.05 Aligned_cols=202 Identities=20% Similarity=0.201 Sum_probs=162.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.....||+|+||.||+|.- .++..||||++....... .++|. +|+.+|.+++|||+|+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-------~~~~~vAVK~~~~~~~~~--~~eF~--------~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-------SDGTVVAVKRLSSNSGQG--EREFL--------NEVEILSRLRHPNLVKL 136 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-------CCCCEEEEEEecCCCCcc--hhHHH--------HHHHHHhcCCCcCcccE
Confidence 35888889999999999999884 667999999887643321 44566 99999999999999999
Q ss_pred eeEEEeCC-EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCceEecCCCce
Q 000355 183 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL---GIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 183 ~~~~~~~~-~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---gIiHRDLKP~NILl~~~~~~ 257 (1620)
+|+|.+.+ ..+||+|||+ |+|.+++.......++-.....|+.++++||+|||.. .||||||||+|||+|++.
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-- 214 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-- 214 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence 99999998 5999999999 7999999853322554444456999999999999994 499999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
.+||+|||+|+..... ... . .+...||..|+|||.......+.++|+++.| +..+..++||..
T Consensus 215 ~aKlsDFGLa~~~~~~-~~~----~-----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG-------VvllElitgr~~ 277 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEG-DTS----V-----STTVMGTFGYLAPEYASTGKLTEKSDVYSFG-------VVLLELITGRKA 277 (361)
T ss_pred CEEccCccCcccCCcc-ccc----e-----eeecCCCCccCChhhhccCCcCcccccccch-------HHHHHHHhCCcc
Confidence 8999999999743210 000 0 0000488899999999988999999999999 455666888865
Q ss_pred CCC
Q 000355 338 GDY 340 (1620)
Q Consensus 338 ~dl 340 (1620)
.|.
T Consensus 278 ~d~ 280 (361)
T KOG1187|consen 278 VDQ 280 (361)
T ss_pred cCC
Confidence 443
No 299
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.94 E-value=1e-26 Score=279.72 Aligned_cols=194 Identities=20% Similarity=0.214 Sum_probs=154.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHH-HhhccCCcccccceeeEEE
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 187 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei-~iL~~l~HpNIv~l~~~~~ 187 (1620)
+.||+|+||+||+|++. .+++.+|+|++.+..... ....+.. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHK------AEEKFYAVKVLQKKAILKKKEEKHIM--------SERNVLLKNVKHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHHhhhHHHHHH--------HHHHHHHHhCCCCCCCceeEEEE
Confidence 47999999999999862 457889999987532221 1122233 444 4568899999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
..+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~ 142 (325)
T cd05602 67 TADKLYFVLDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGL 142 (325)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9999997 356688999999999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhccc
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
++....... . .....||+.|||||++.+..|+.++|+|+.|++. |+++++..+|.
T Consensus 143 a~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~~pf~ 197 (325)
T cd05602 143 CKENIEHNG-----T------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL-YEMLYGLPPFY 197 (325)
T ss_pred CcccccCCC-----C------cccccCCccccCHHHHcCCCCCCccccccccHHH-HHHhcCCCCCC
Confidence 984321110 0 1122378899999999999999999999999876 66665544443
No 300
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.2e-28 Score=281.47 Aligned_cols=184 Identities=17% Similarity=0.198 Sum_probs=155.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCC-CCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|.-++.||.|+||.||-|++. .+.++||||++... +.+.+.-.+.+ +|+.+|+.++|||+|.
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~------~n~evVAIKKMsySGKQs~EKWqDIl--------KEVrFL~~l~HPntie 90 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDIL--------KEVRFLRQLRHPNTIE 90 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeecc------CccceeeeeeccccccccHHHHHHHH--------HHHHHHHhccCCCccc
Confidence 346788899999999999999973 45689999999753 23333334444 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+.++|..+...|||||||-|+-.|++.- ..+++-+.++..|..+.+.||.|||+.+.||||||..|||+++.| .|||
T Consensus 91 YkgCyLre~TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKL 167 (948)
T KOG0577|consen 91 YKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKL 167 (948)
T ss_pred ccceeeccchHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeee
Confidence 9999999999999999999977777764 346788999999999999999999999999999999999999999 9999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---cccccccccccccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRG 318 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G 318 (1620)
+|||.|.... ++ .+..|||+|||||++. ...|+.++|+|+.|
T Consensus 168 aDFGSAsi~~-------PA--------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG 212 (948)
T KOG0577|consen 168 ADFGSASIMA-------PA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 212 (948)
T ss_pred ccccchhhcC-------ch--------hcccCCccccchhHheeccccccCCccceeecc
Confidence 9999987432 11 2345899999999875 56799999999999
No 301
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.94 E-value=1.3e-26 Score=279.17 Aligned_cols=191 Identities=19% Similarity=0.186 Sum_probs=154.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|.+++...........+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK------KTERIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEhhHhcchhHHHHHH-------HHHHHHHhcCCCCcCCceeeEEEe
Confidence 46999999999999862 45789999999864333222222222 788888766 79999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||+++ +|..++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~ 143 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCcc
Confidence 9999999999994 9988887 356789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhh
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+........ .....||+.|+|||++.+..|+.++|+|+.|++. |+++++.
T Consensus 144 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il-~el~~g~ 193 (329)
T cd05618 144 KEGLRPGDT-----------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM-FEMMAGR 193 (329)
T ss_pred ccccCCCCc-----------cccccCCccccCHHHHcCCCCCCccceecccHHH-HHHhhCC
Confidence 842211100 1112368899999999999999999999999775 5555433
No 302
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=3.7e-26 Score=267.88 Aligned_cols=146 Identities=23% Similarity=0.283 Sum_probs=126.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|+..+.||+|.||.||+|.+ ..+++.+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~------~~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARD------KKTGEIVALKKIRLDNEEEGIPSTAL--------REISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeee------cCCCcEEEEEEeccccccccccHHHH--------HHHHHHHhcCCCCHHHHHhh
Confidence 66788999999999999986 23578999999976532222223333 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 186 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+...+..++||||++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~--~~~l~d~g 143 (282)
T cd07829 67 IHTERKLYLVFEYCDMDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFG 143 (282)
T ss_pred hhcCCceEEEecCcCcCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC--CEEEecCC
Confidence 9999999999999999999999842 24689999999999999999999999999999999999999988 89999999
Q ss_pred Ccc
Q 000355 266 LVG 268 (1620)
Q Consensus 266 la~ 268 (1620)
+++
T Consensus 144 ~~~ 146 (282)
T cd07829 144 LAR 146 (282)
T ss_pred ccc
Confidence 987
No 303
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.94 E-value=1.1e-25 Score=268.65 Aligned_cols=149 Identities=17% Similarity=0.172 Sum_probs=127.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
...|+..+.||+|+||.||+|++. .++..+|+|.+....... ....++. +|+++++.++||||++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc------CCCcEEEEEEEecccccChHHHHHHH--------HHHHHHHhCCCCCccc
Confidence 446888899999999999999962 357889999986532222 2233344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
+++++...+..++||||+.|+|.+++.. ....+++..+..++.|++.||.|||+++++||||||+|||++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~kl 156 (308)
T cd06634 80 YRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (308)
T ss_pred EEEEEEcCCeeEEEEEccCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--cEEE
Confidence 9999999999999999999999888864 345578999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||++.
T Consensus 157 ~dfg~~~ 163 (308)
T cd06634 157 GDFGSAS 163 (308)
T ss_pred CCcccce
Confidence 9999887
No 304
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.94 E-value=1.5e-25 Score=258.11 Aligned_cols=146 Identities=20% Similarity=0.219 Sum_probs=128.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|++++++++||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK------DTGELMAVKSVELSGDSEEELEALE--------REIRILSSLQHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC------CCCcEEEEEEeeccccchHHHHHHH--------HHHHHHHHcCCCCEeeEEE
Confidence 4788999999999999999862 3678999999876544333334444 8999999999999999999
Q ss_pred EEEeC--CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTS--GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~--~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
.+... +.+++||||++ ++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l 142 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKL 142 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEE
Confidence 99988 89999999997 599999984 33789999999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||.+.
T Consensus 143 ~d~~~~~ 149 (260)
T cd06606 143 ADFGCAK 149 (260)
T ss_pred cccccEE
Confidence 9999987
No 305
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.94 E-value=1.7e-25 Score=257.60 Aligned_cols=146 Identities=21% Similarity=0.288 Sum_probs=128.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|++|.||++.+. ..++.+++|.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL------ETGDFVAIKQISLEKIKEEALKSIM--------QEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc------CCCcEEEEEEecccccCHHHHHHHH--------HHHHHHHhCCCCCccEEEE
Confidence 5889999999999999999862 3568899999977544323333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++.+++..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d 142 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLAD 142 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999985 99999983 46789999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||+++
T Consensus 143 ~~~~~ 147 (254)
T cd06627 143 FGVAT 147 (254)
T ss_pred cccce
Confidence 99987
No 306
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.94 E-value=8.4e-26 Score=267.50 Aligned_cols=143 Identities=19% Similarity=0.177 Sum_probs=122.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.|+....||+|+||.||++... .++..+|+|++.... ......+. +|+.+++.++||||+++++
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~ 84 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVK------SSGKLVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHENVVEMYN 84 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEc------CCCeEEEEEEecccc--hhHHHHHH--------HHHHHHHhcCCcchhheee
Confidence 3444578999999999998862 467899999985432 22233344 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+...+..++||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .++|+|
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--~~~l~d 159 (292)
T cd06657 85 SYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSD 159 (292)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999986 8888775 34578999999999999999999999999999999999999998 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||++.
T Consensus 160 fg~~~ 164 (292)
T cd06657 160 FGFCA 164 (292)
T ss_pred cccce
Confidence 99876
No 307
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94 E-value=1.8e-26 Score=277.83 Aligned_cols=194 Identities=18% Similarity=0.174 Sum_probs=156.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|++. .+++.+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK------KNDQIYAMKVVKKELVHDDEDIDWVQ-------TEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhhcCCCCEeeEEEEEEe
Confidence 47999999999999862 45789999999864333322222222 899998888 69999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
.+.+|+||||++| +|..++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~ 143 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMC 143 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccc
Confidence 9999999999985 9998887 345789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcc
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
+........ .....||+.|+|||++.+..|+.++|+|+.|++. |+++++..+|
T Consensus 144 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil-~ell~g~~pf 196 (327)
T cd05617 144 KEGLGPGDT-----------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLM-FEMMAGRSPF 196 (327)
T ss_pred eeccCCCCc-----------eecccCCcccCCHHHHCCCCCCchheeehhHHHH-HHHHhCCCCC
Confidence 842211100 1122368899999999999999999999999776 6655544443
No 308
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.3e-25 Score=244.55 Aligned_cols=333 Identities=18% Similarity=0.216 Sum_probs=234.5
Q ss_pred EEEEcCCCCEEEEeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEE
Q 000355 1243 LGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1322 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~ 1322 (1620)
|++.=.|+++. ..+++.+.||.+.|+.|+......++.++|. |.+.+||.+++|+|+.+|.||.+.|++|+
T Consensus 127 ivssFk~~t~~-----~~lvre~~GHkDGiW~Vaa~~tqpi~gtASA----DhTA~iWs~Esg~CL~~Y~GH~GSVNsik 197 (481)
T KOG0300|consen 127 IVSSFKDGTVK-----FRLVRELEGHKDGIWHVAADSTQPICGTASA----DHTARIWSLESGACLATYTGHTGSVNSIK 197 (481)
T ss_pred heeeecCCcee-----EeehhhhcccccceeeehhhcCCcceeeccc----ccceeEEeeccccceeeecccccceeeEE
Confidence 44554555543 2467889999999999999888889999998 89999999999999999999999999999
Q ss_pred EeeCCCeE--EEeCCcEEEEeCCCC----ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEee--c
Q 000355 1323 VLSSSGRI--ASCDGTLHVWNSQTG----KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF--D 1394 (1620)
Q Consensus 1323 f~~~~~~l--aS~DgtV~IWD~~tg----~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f--~ 1394 (1620)
|++.+..+ +|+|++.+||...-. +.... ..|+....... +... ............++-.+.-..+ +
T Consensus 198 fh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~-~~hSsEeE~e~--sDe~---~~d~d~~~~sD~~tiRvPl~~ltgH 271 (481)
T KOG0300|consen 198 FHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAP-SDHSSEEEEEH--SDEH---NRDTDSSEKSDGHTIRVPLMRLTGH 271 (481)
T ss_pred eccccceEEEccCCcchHHHHHhhcCcCCCCCCC-CCCCchhhhhc--cccc---ccccccccccCCceeeeeeeeeecc
Confidence 99988877 788999999973211 10000 00000000000 0000 0000000111112222222222 3
Q ss_pred CCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEec
Q 000355 1395 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1474 (1620)
Q Consensus 1395 ~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~ 1474 (1620)
...|.|..|-..|+.+++++.|.+..+||+++|+.++.+.||.....|. +- .|...++++.+.
T Consensus 272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHc------st-----------HptQrLVvTsSr 334 (481)
T KOG0300|consen 272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHC------ST-----------HPTQRLVVTSSR 334 (481)
T ss_pred ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhcccc------cc-----------CCcceEEEEecc
Confidence 3446667777789999999999999999999999999999988765442 22 256689999999
Q ss_pred CCcEEEEECCCC-cEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCE
Q 000355 1475 SGQCRLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQD 1551 (1620)
Q Consensus 1475 Dg~I~lwD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~ 1551 (1620)
|.+.++||++.. ..+..|+||...|+++...-+..++|||.|.+|++||+++.+ ..+.+++. .++++ +++-.+..
T Consensus 335 DtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR-splATIRt-dS~~NRvavs~g~~i 412 (481)
T KOG0300|consen 335 DTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR-SPLATIRT-DSPANRVAVSKGHPI 412 (481)
T ss_pred CceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc-Ccceeeec-CCccceeEeecCCce
Confidence 999999999943 457789999999999996566789999999999999999874 45556653 34455 46666677
Q ss_pred EEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCC--EEEEEeCCCcEEEc
Q 000355 1552 VISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSR--LFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1552 LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~--lLasgs~DG~IrlW 1619 (1620)
++.--+++ |++||+.. +-. .++-... ..+|...|.+++|+-+.. -|.+||.|..+.=|
T Consensus 413 IAiPhDNRqvRlfDlnG------~Rl---aRlPrts-RqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW 473 (481)
T KOG0300|consen 413 IAIPHDNRQVRLFDLNG------NRL---ARLPRTS-RQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGW 473 (481)
T ss_pred EEeccCCceEEEEecCC------Ccc---ccCCccc-ccccceeeeeeeccccCcccccccccccceeeee
Confidence 77778888 99999862 211 1111111 126999999999986543 37789999988777
No 309
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=8.6e-26 Score=261.67 Aligned_cols=139 Identities=19% Similarity=0.235 Sum_probs=120.6
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||.||++++. .+++.+++|.+.......+. ...+. +|+++++.++||||+++++.+..++
T Consensus 1 lg~g~~~~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKK------STGDIYAIKVIKKADMIRKNQVDQVL--------TERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEecchhhhhhhHHHHHH--------HHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999999962 35789999998764332222 22333 8999999999999999999999999
Q ss_pred EEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 191 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 191 ~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
..|+||||+++ +|.+++.. .+.+++..+..++.||+.||.|||++||+||||+|+||+++.++ .+||+|||++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~--~~~l~dfg~~~ 141 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSK 141 (265)
T ss_pred EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC--CEEEEecccch
Confidence 99999999985 99999984 34789999999999999999999999999999999999999999 89999999987
No 310
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=6.3e-26 Score=289.48 Aligned_cols=174 Identities=17% Similarity=0.034 Sum_probs=115.9
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|++.... ...+..||+|++....... ... .| .+....+.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~--~~~~~~vAvK~~~~~~~~e----~~~--------~e--~l~~~~~~~~~~ 193 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQ--SKKEGKYVLKKATEYGAVE----IWM--------NE--RVRRACPNSCAD 193 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCc--cccCcEEEEEEecccchhH----HHH--------HH--HHHhhchhhHHH
Confidence 4679999999999999999999973221 1237899999876422111 111 11 111122233333
Q ss_pred eeeE------EEeCCEEEEEEeCCCC-CHHHHHhhCCC------------------CCCCHHHHHHHHHHHHHHHHHHHh
Q 000355 182 VLGL------LKTSGLITSVIPKTPY-TLENILQFSPN------------------ALKSEWHVRFLMYQLLSAIAYLHS 236 (1620)
Q Consensus 182 l~~~------~~~~~~~~lV~E~~~g-~L~~~l~~~~~------------------~~l~~~~i~~i~~qil~aL~yLH~ 236 (1620)
++.. ...+..+++||||+++ +|.+++..... ....+..++.++.||+.||.|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~ 273 (566)
T PLN03225 194 FVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS 273 (566)
T ss_pred HHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222 2345689999999994 99998873211 011234467899999999999999
Q ss_pred CCceecCCCCCceEecC-CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcc
Q 000355 237 LGIAHRSVCPSNVLLTD-SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 303 (1620)
Q Consensus 237 ~gIiHRDLKP~NILl~~-~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~ 303 (1620)
+||+||||||+|||++. ++ .+||+|||+|+........ ......+|+.|||||.+
T Consensus 274 ~gIiHRDLKP~NILl~~~~~--~~KL~DFGlA~~l~~~~~~----------~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSG--SFKIIDLGAAADLRVGINY----------IPKEFLLDPRYAAPEQY 329 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCC--cEEEEeCCCcccccccccc----------CCcccccCCCccChHHh
Confidence 99999999999999986 45 7999999999843211100 01123367789999864
No 311
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=3.7e-25 Score=275.96 Aligned_cols=273 Identities=22% Similarity=0.348 Sum_probs=225.6
Q ss_pred Eeec-ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEE-EecCCcceeEEEEeeCCCeE--EEeCCcEEE
Q 000355 1264 SIRA-HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG-YYGHEEVVNDICVLSSSGRI--ASCDGTLHV 1339 (1620)
Q Consensus 1264 tl~g-H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~-l~gH~~~V~sV~f~~~~~~l--aS~DgtV~I 1339 (1620)
.+.+ |...|.+..|+ +.++++|+. |++|++||..++..+.+ +.||.+.|.++++...+..+ +|.|.|+++
T Consensus 202 ~~~~~~~~~~~~~q~~--~~~~~~~s~----~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rv 275 (537)
T KOG0274|consen 202 VLLGTDDHVVLCLQLH--DGFFKSGSD----DSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERV 275 (537)
T ss_pred eecccCcchhhhheee--cCeEEecCC----CceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEe
Confidence 3444 56678888888 447888886 89999999999999888 99999999999996645555 666999999
Q ss_pred EeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcE
Q 000355 1340 WNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1419 (1620)
Q Consensus 1340 WD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtV 1419 (1620)
||..+|+|..++.+|... +.++.. .+..+++|+.|.+|
T Consensus 276 Wd~~sg~C~~~l~gh~st------------------------------v~~~~~------------~~~~~~sgs~D~tV 313 (537)
T KOG0274|consen 276 WDCSTGECTHSLQGHTSS------------------------------VRCLTI------------DPFLLVSGSRDNTV 313 (537)
T ss_pred EecCCCcEEEEecCCCce------------------------------EEEEEc------------cCceEeeccCCceE
Confidence 999999999999876422 222222 24578889999999
Q ss_pred EEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1420 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1420 rlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
++||+.++.+++++.+|. ..|+++... +.++++|+.||+|++||+++++++.++.||.+.|
T Consensus 314 kVW~v~n~~~l~l~~~h~------~~V~~v~~~-------------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V 374 (537)
T KOG0274|consen 314 KVWDVTNGACLNLLRGHT------GPVNCVQLD-------------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRV 374 (537)
T ss_pred EEEeccCcceEEEecccc------ccEEEEEec-------------CCEEEEEecCceEEEEEhhhceeeeeecCCcceE
Confidence 999999999999998754 458888763 4689999999999999999999999999999999
Q ss_pred EEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEeecCCEEEEEeCCc-eEEEeccCCCCCCCccee
Q 000355 1500 TKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRL 1577 (1620)
Q Consensus 1500 ~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1577 (1620)
.++. ... ..+++||.|++|++||+++.. +++.++.+|..-|..+..+++.|++++.|+ |++||.. ++....
T Consensus 375 ~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~-~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~-----~~~~~~ 447 (537)
T KOG0274|consen 375 YSLIVDSE-NRLLSGSLDTTIKVWDLRTKR-KCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAE-----EGECLR 447 (537)
T ss_pred EEEEecCc-ceEEeeeeccceEeecCCchh-hhhhhhcCCcccccccccccceeEeccccccEEEeecc-----cCceee
Confidence 9997 433 899999999999999999874 677899999999999999999999999999 9999975 333322
Q ss_pred eccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1578 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1578 ~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
+. .+ +|.+.|+.+++. ...+++++.||.+++||
T Consensus 448 ~~-------~~-~~~~~v~~l~~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 448 TL-------EG-RHVGGVSALALG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred ee-------cc-CCcccEEEeecC--cceEEEEecCCeeEEEe
Confidence 11 11 155678887776 57888999999999996
No 312
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=7.5e-26 Score=262.52 Aligned_cols=147 Identities=20% Similarity=0.191 Sum_probs=118.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecC---CCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIE---GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~---~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+|.+.+.||+|+||.||++.+.. .+..+++|.++. .........++. +|+.+++.++||||++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVLKEIPVGELNPNETVQAN--------QEAQLLSKLDHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEecC------CCCcceEEEeccccccccCcchHHHHH--------HHHHHHHhCCCCcHHH
Confidence 58899999999999999998632 223344444433 222222222233 7999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+++++.+.+..++||||+++ +|.+++.. .....+++..++.++.|++.||.|||++||+||||||+||+++.+ .
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~ 143 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---L 143 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---C
Confidence 99999999999999999995 99988864 234568999999999999999999999999999999999999864 4
Q ss_pred EEEeecCCcc
Q 000355 259 LYICDKPLVG 268 (1620)
Q Consensus 259 lKL~DFGla~ 268 (1620)
+||+|||+++
T Consensus 144 ~~l~d~g~~~ 153 (260)
T cd08222 144 LKIGDFGVSR 153 (260)
T ss_pred EeecccCcee
Confidence 9999999987
No 313
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.94 E-value=3.1e-25 Score=237.94 Aligned_cols=277 Identities=19% Similarity=0.278 Sum_probs=229.4
Q ss_pred EEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEE--EEecCCcceeEEEEeeCCCe-E--EEeCCcE
Q 000355 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGR-I--ASCDGTL 1337 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~--~l~gH~~~V~sV~f~~~~~~-l--aS~DgtV 1337 (1620)
+.+++|...|.+|+|+.+|..+++|+. |+++++|++..++... .++||++.|..++|.|...- + +|+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSF----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeeccc----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 667899999999999999999999996 9999999998775554 35799999999999886543 3 6779999
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCC
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1417 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dg 1417 (1620)
++||.++++++........ -..+.++|+|+++++++.|.
T Consensus 90 r~wd~r~~k~~~~i~~~~e-----------------------------------------ni~i~wsp~g~~~~~~~kdD 128 (313)
T KOG1407|consen 90 RIWDIRSGKCTARIETKGE-----------------------------------------NINITWSPDGEYIAVGNKDD 128 (313)
T ss_pred EEEEeccCcEEEEeeccCc-----------------------------------------ceEEEEcCCCCEEEEecCcc
Confidence 9999999999877753211 13466788999999999999
Q ss_pred cEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCC
Q 000355 1418 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDG 1497 (1620)
Q Consensus 1418 tVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~ 1497 (1620)
.|.+.|.++.+.....+ +.-.++.++|.. +++++......|+|.|....+.+++.++++|..
T Consensus 129 ~it~id~r~~~~~~~~~-------~~~e~ne~~w~~-----------~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s 190 (313)
T KOG1407|consen 129 RITFIDARTYKIVNEEQ-------FKFEVNEISWNN-----------SNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS 190 (313)
T ss_pred cEEEEEecccceeehhc-------ccceeeeeeecC-----------CCCEEEEecCCceEEEEeccccccccccccCCc
Confidence 99999999988776554 333466677652 334666666679999999999999999999998
Q ss_pred cEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCCCCCCC
Q 000355 1498 YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDG 1573 (1620)
Q Consensus 1498 ~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1573 (1620)
...||. +|+|++||+||.|..+.+||+..- .+...+..+.-+|. +||.||++||+||.|. |-+-++. +|
T Consensus 191 nCicI~f~p~GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ve-----tG 263 (313)
T KOG1407|consen 191 NCICIEFDPDGRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVE-----TG 263 (313)
T ss_pred ceEEEEECCCCceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCcceeeccCccceEEeEecc-----cC
Confidence 888999 999999999999999999999876 66778888888998 5999999999999999 8777765 33
Q ss_pred cceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCC---------CcEEEc
Q 000355 1574 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED---------GYLRLC 1619 (1620)
Q Consensus 1574 ~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~D---------G~IrlW 1619 (1620)
. +++.+. +.++...|+|+|...+||-+++| |+||+|
T Consensus 264 d------~~~eI~----~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 264 D------RVWEIP----CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred C------eEEEee----ccCCceeEEecCCCceeeEEecCCCCccccccceeEEe
Confidence 3 555543 77889999999999999988765 567765
No 314
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.94 E-value=1.8e-25 Score=258.02 Aligned_cols=148 Identities=20% Similarity=0.259 Sum_probs=128.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .+++.+|+|.+...........++. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL------SDNQFYALKEVDLGSMSQKEREDAV--------NEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC------CCCCEEEEEEEehhhccHHHHHHHH--------HHHHHHHhCCCCCchhhhh
Confidence 5889999999999999999862 4578899999876443333333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++......++||||+++ +|.+++... ....+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--~~kl 144 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--LVKI 144 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC--cEEE
Confidence 99999999999999985 999998742 235678899999999999999999999999999999999999988 8999
Q ss_pred eecCCcc
Q 000355 262 CDKPLVG 268 (1620)
Q Consensus 262 ~DFGla~ 268 (1620)
+|||+++
T Consensus 145 ~d~g~~~ 151 (256)
T cd08530 145 GDLGISK 151 (256)
T ss_pred eeccchh
Confidence 9999987
No 315
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94 E-value=5e-27 Score=284.02 Aligned_cols=198 Identities=17% Similarity=0.121 Sum_probs=161.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.-|...+.||+|+||.||++++ .++|+.||||.+++.. ......... +|+++|++|+|||||+++
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrn------ketG~~vAvK~~~~~~-~~r~~e~~~--------~EieilkKLnh~NIVk~f 77 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRN------KETGRLVAVKTFNKES-SLRPRERWC--------REIEILKKLNHPNIVKLF 77 (732)
T ss_pred cceeehhhhcCCccceeeeecc------cccccchhHHhhhhhc-ccchHHHHH--------HHHHHHHHcCchhhhhhc
Confidence 3456678999999999999986 2678999999997743 223333344 899999999999999999
Q ss_pred eEEEeCC------EEEEEEeCCC-CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEec--C
Q 000355 184 GLLKTSG------LITSVIPKTP-YTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT--D 253 (1620)
Q Consensus 184 ~~~~~~~------~~~lV~E~~~-g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~--~ 253 (1620)
++-++.. ...+|||||. |||...++... ...+++.++..++..+..||.|||++||+||||||+||++- .
T Consensus 78 ~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 78 DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence 9876544 5789999999 59999998633 35699999999999999999999999999999999999984 4
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-ccccccccccccccccchHHHHhhh
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+|...-||+|||.||...... ...+..||+.|.+||+.. +..|+..+|.|+.|++. |+..++.
T Consensus 158 dgq~IyKLtDfG~Arel~d~s------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl-Y~caTG~ 221 (732)
T KOG4250|consen 158 DGQSIYKLTDFGAARELDDNS------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL-YECATGE 221 (732)
T ss_pred CCceEEeeecccccccCCCCC------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHH-HHHhccC
Confidence 454567999999999543221 245566899999999999 58899999999999776 6555544
No 316
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=276.22 Aligned_cols=214 Identities=15% Similarity=0.068 Sum_probs=171.7
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
++-||.|+.|.||+|+- .++.||||+++.-+. .+|+-|++|+|||||.+.++|..
T Consensus 129 LeWlGSGaQGAVF~Grl--------~netVAVKKV~elkE-----------------TdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--------HNETVAVKKVRELKE-----------------TDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred hhhhccCcccceeeeec--------cCceehhHHHhhhhh-----------------hhHHHHHhccCcceeeEeeeecC
Confidence 67899999999999883 568899999864221 57888999999999999999999
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
...+|||||||. |-|.++|+ .+..++......|..+|+.|+.|||.+.|||||||.-||||+.+. .|||+|||.+
T Consensus 184 sPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d--~VKIsDFGTS 259 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD--VVKISDFGTS 259 (904)
T ss_pred CceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc--eEEeccccch
Confidence 999999999999 79999999 567788888899999999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCCCCCcCCcccc
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMP 347 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~q~pv~p 347 (1620)
+..... .+ .....||..|||||++.+.+.+.++|+|+.|.+. ||+|+.-- +|.|..+..|+=
T Consensus 260 ~e~~~~------ST------kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVL-WEmLT~Ei-----PYkdVdssAIIw 321 (904)
T KOG4721|consen 260 KELSDK------ST------KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVL-WEMLTGEI-----PYKDVDSSAIIW 321 (904)
T ss_pred Hhhhhh------hh------hhhhhhhHhhhCHHHhhcCCcccccceehhHHHH-HHHHhcCC-----CccccchheeEE
Confidence 843211 11 1223469999999999999999999999999776 77776543 356666665442
Q ss_pred eeeccC--CCCCCCCCCCCCCCCc
Q 000355 348 WVIDFS--TKPDENFDSGSRDLSK 369 (1620)
Q Consensus 348 wv~d~~--~~~~~~~~~~~rdlsk 369 (1620)
=|-... ..-+...|..|.-|-|
T Consensus 322 GVGsNsL~LpvPstcP~GfklL~K 345 (904)
T KOG4721|consen 322 GVGSNSLHLPVPSTCPDGFKLLLK 345 (904)
T ss_pred eccCCcccccCcccCchHHHHHHH
Confidence 222221 2224566666665543
No 317
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=1.2e-26 Score=252.77 Aligned_cols=277 Identities=13% Similarity=0.206 Sum_probs=231.6
Q ss_pred ccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEE--------eecccCcEEEEEEccCCCEEEEeccC
Q 000355 1222 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSS--------IRAHHGALRSVAVGQDECTVFTAGIG 1290 (1620)
Q Consensus 1222 ~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~t--------l~gH~~~V~svafspdg~~LaSgs~d 1290 (1620)
.|.+.-+-+ |||||++ ++|||.||-|-+||.. |+..+. +--|.++|.|+.||.|...+|||+.
T Consensus 210 Fg~KSh~EcA~FSPDgqy-----LvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsq- 283 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQY-----LVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQ- 283 (508)
T ss_pred cccccchhheeeCCCCce-----EeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCc-
Confidence 344444544 9999998 9999999999999976 654433 3358899999999999999999998
Q ss_pred CCCCcEEEEEeCCCCeEEEEEe-cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCC
Q 000355 1291 PGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1367 (1620)
Q Consensus 1291 ~~~DgtVrLWdl~tg~~l~~l~-gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~ 1367 (1620)
||.|++|.+.||.|++.|. .|+..|+|+.|+.++..+ +|.|.+|+|--+++|+++..+.+|+.
T Consensus 284 ---DGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS----------- 349 (508)
T KOG0275|consen 284 ---DGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS----------- 349 (508)
T ss_pred ---CCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc-----------
Confidence 9999999999999999987 899999999999999888 56699999999999999999988742
Q ss_pred cccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccc
Q 000355 1368 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1447 (1620)
Q Consensus 1368 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~ 1447 (1620)
.|+...|++||..+++++.||+|++|+..+++|+.+|+.... ...|+
T Consensus 350 -----------------------------yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~----d~~vn 396 (508)
T KOG0275|consen 350 -----------------------------YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGT----DYPVN 396 (508)
T ss_pred -----------------------------cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCC----cccce
Confidence 245566777899999999999999999999999999985443 23466
Q ss_pred eEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc----CCcEEEEEeCCCCEEEEEeCCCcEEEEE
Q 000355 1448 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH----DGYVTKLAAPEDHLLVSSSLDKTLRIWD 1523 (1620)
Q Consensus 1448 sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH----~~~V~svaspdg~~LaSgS~DgtI~IWD 1523 (1620)
+|-..|. ++..++++...++|++-++. |+.++++... .+-|.++-+|.|.++.+.+.|+.++++.
T Consensus 397 sv~~~PK----------npeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~ 465 (508)
T KOG0275|consen 397 SVILLPK----------NPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFS 465 (508)
T ss_pred eEEEcCC----------CCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEE
Confidence 6665442 34688889999999999986 8888888632 2346666699999999999999999999
Q ss_pred CCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1524 LRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1524 l~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
+.+| +.-.++..|...|.. -.|..+.+|+-+.|+ +++|.
T Consensus 466 ~~sG--~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 466 VLSG--KLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eecC--ceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 9998 555688888887774 678899999999999 99995
No 318
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94 E-value=5.6e-26 Score=294.19 Aligned_cols=215 Identities=18% Similarity=0.123 Sum_probs=166.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
+++|++.+.||+|+||.||+|++. .+++.||+|++......... .+++. +|+++++.++||||++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~------~tg~~VAIK~I~~~l~~~e~~~~rfl--------rEi~ILs~L~HPNIVk 66 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDP------VCSRRVALKKIREDLSENPLLKKRFL--------REAKIAADLIHPGIVP 66 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEEC------CCCcEEEEEEECcccccCHHHHHHHH--------HHHHHHHhCCCcCcCe
Confidence 468999999999999999999872 35789999999764333222 23344 8999999999999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
+++++.+++..|+||||++| +|.+++.... ....+...+..++.||+.||+|||++||+||||||+|||+
T Consensus 67 l~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL 146 (932)
T PRK13184 67 VYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146 (932)
T ss_pred EEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE
Confidence 99999999999999999995 9999986311 1234556778899999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCcccCCCCCcc--cCCCC-----CCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 252 TDSCWSWLYICDKPLVGFNSIADWC--TIPTS-----PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~~~~~~~~~--~~~~~-----~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
+.++ .+||+|||+++........ ..... ...........||+.|||||++.+..++.++|+|+.|++. |+
T Consensus 147 d~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVIL-yE 223 (932)
T PRK13184 147 GLFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVIL-YQ 223 (932)
T ss_pred cCCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHH-HH
Confidence 9998 8999999999854211100 00000 0000011223589999999999999999999999999887 77
Q ss_pred HHhhhhcccC
Q 000355 325 YLLFLNKLAG 334 (1620)
Q Consensus 325 yL~~ln~~~g 334 (1620)
++++..+|.+
T Consensus 224 LLTG~~PF~~ 233 (932)
T PRK13184 224 MLTLSFPYRR 233 (932)
T ss_pred HHHCCCCCCC
Confidence 7776655544
No 319
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-27 Score=265.80 Aligned_cols=207 Identities=16% Similarity=0.119 Sum_probs=174.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
..+|..+.+||+|+||+|.+|.++ .+.+.+|||+++++-....+..+.. +.|-++|.... -|.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerk------gtdELyAiKiLkKDViiQdDDvect-------m~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERK------GTDELYAIKILKKDVIIQDDDVECT-------MVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeeccc------CcchhhhhhhhccceeeecCcccce-------ehhhhheecCCCCchHHH
Confidence 458999999999999999998852 3458899999998765544433332 47888888764 589999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
|+.+|++-+.+|+||||+.| +|.-.|+ +-+.+.|..+.+|+.+|+-||-|||++|||.||||.+|||++.+| ++|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--HiK 490 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIK 490 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--ceE
Confidence 99999999999999999995 9988888 578899999999999999999999999999999999999999999 999
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 338 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~ 338 (1620)
|+|||+++.+..... ++ .+.| |||-|+|||++.-++|+..+|+|+.|.+. ||+|.+-.+|.|..-.
T Consensus 491 i~DFGmcKEni~~~~-----TT-----kTFC-GTPdYiAPEIi~YqPYgksvDWWa~GVLL-yEmlaGQpPFdGeDE~ 556 (683)
T KOG0696|consen 491 IADFGMCKENIFDGV-----TT-----KTFC-GTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQPPFDGEDED 556 (683)
T ss_pred eeecccccccccCCc-----ce-----eeec-CCCcccccceEEecccccchhHHHHHHHH-HHHHcCCCCCCCCCHH
Confidence 999999996543221 11 2334 59999999999999999999999999877 8888888777776543
No 320
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.93 E-value=3.1e-27 Score=258.83 Aligned_cols=201 Identities=17% Similarity=0.170 Sum_probs=161.9
Q ss_pred cccccCCCeee-eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-C
Q 000355 98 SCSRIMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-R 175 (1620)
Q Consensus 98 ~~~~~~~~y~~-~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~ 175 (1620)
....+.++|.+ -++||-|-.|+|..|.++ .+++.+|+|++.... + .. ||+++.-.. .
T Consensus 55 k~~~itedY~is~qvLG~GinGkV~~C~~k------~T~ekfALKvL~Ds~---K----AR--------rEVeLHw~~s~ 113 (400)
T KOG0604|consen 55 KEYSITEDYSISWQVLGAGINGKVVQCVHK------RTQEKFALKVLLDSP---K----AR--------REVELHWMASG 113 (400)
T ss_pred hcccchhhheehhhhhccccCCceEEEEec------cchhhhHHHHHhcCH---H----HH--------hHhhhhhhhcC
Confidence 45566788887 589999999999998862 567899999985421 1 11 788775444 6
Q ss_pred cccccceeeEEEeC----CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceE
Q 000355 176 HPNVAPVLGLLKTS----GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250 (1620)
Q Consensus 176 HpNIv~l~~~~~~~----~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 250 (1620)
|||||.++++|++. ..+.+|||+|+| +|+..|.......++|.++..|++||..|+.|||+.+|.||||||||+|
T Consensus 114 h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 114 HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 99999999998753 478999999995 9999999777778999999999999999999999999999999999999
Q ss_pred ecCCCc-eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhh
Q 000355 251 LTDSCW-SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 251 l~~~~~-~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
....+. ..+||+|||+|+.... .+...+.|. ||+|.|||++....|+..+|+|+.|.|. |-+|+++
T Consensus 194 yt~t~~na~lKLtDfGFAK~t~~-----------~~~L~TPc~-TPyYvaPevlg~eKydkscdmwSlgVim-YIlLCGy 260 (400)
T KOG0604|consen 194 YTTTSPNAPLKLTDFGFAKETQE-----------PGDLMTPCF-TPYYVAPEVLGPEKYDKSCDMWSLGVIM-YILLCGY 260 (400)
T ss_pred eecCCCCcceEecccccccccCC-----------CccccCCcc-cccccCHHHhCchhcCCCCCccchhHHH-HHhhcCC
Confidence 976543 4899999999994321 112234454 8999999999999999999999999776 5555555
Q ss_pred hcc
Q 000355 330 NKL 332 (1620)
Q Consensus 330 n~~ 332 (1620)
.+|
T Consensus 261 PPF 263 (400)
T KOG0604|consen 261 PPF 263 (400)
T ss_pred Ccc
Confidence 443
No 321
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-26 Score=273.13 Aligned_cols=198 Identities=16% Similarity=0.086 Sum_probs=164.2
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
...+.+.||+|+||+||+|.. .-.||||+++......+..+.|. +|+.++++-+|.||+-+.|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~w---------hGdVAVK~Lnv~~pt~~qlqaFK--------nEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRW---------HGDVAVKLLNVDDPTPEQLQAFK--------NEVAVLKKTRHENILLFMG 455 (678)
T ss_pred Hhhccceeccccccceeeccc---------ccceEEEEEecCCCCHHHHHHHH--------HHHHHHhhcchhhheeeeh
Confidence 566789999999999999884 24589999999877777666776 9999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
++..+.. .||.-+|+| +|+.+|+- ....|.....+.|++||++|+.|||.++|||||||..||++.+++ .|||+|
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~--kVkIgD 531 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL--KVKIGD 531 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC--cEEEec
Confidence 9998877 999999998 99999984 345678888999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---ccccccccccccccccchHHHHhhhhccc
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLA 333 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G~isnfeyL~~ln~~~ 333 (1620)
|||+.....- ......... -|...|||||+++ ..+|+..+|+++.|.+. ||+++.--+++
T Consensus 532 FGLatvk~~w-~g~~q~~qp--------~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~-YELltg~lPys 594 (678)
T KOG0193|consen 532 FGLATVKTRW-SGEQQLEQP--------HGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW-YELLTGELPYS 594 (678)
T ss_pred ccceeeeeee-ccccccCCC--------ccchhhhcHHHHhhcccCCCCcccchhhhhHHH-HHHHhCcCCcC
Confidence 9999732211 111111111 1456799999886 56789999999999877 88887766655
No 322
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=5.8e-25 Score=252.14 Aligned_cols=145 Identities=19% Similarity=0.267 Sum_probs=127.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|+..+.||+|++|.||++.+. .+++.+++|++..... .....+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESK--EKKEKII--------NEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC------CCCcEEEEEEecccch--hHHHHHH--------HHHHHHHhCCCCCEeEEEE
Confidence 4888999999999999999962 3578899999876432 2233344 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+..++..++++||++ ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d 141 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLID 141 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--eEEEee
Confidence 9999999999999999 5999999742 25789999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000355 264 KPLVG 268 (1620)
Q Consensus 264 FGla~ 268 (1620)
||.+.
T Consensus 142 ~~~~~ 146 (253)
T cd05122 142 FGLSA 146 (253)
T ss_pred ccccc
Confidence 99887
No 323
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.93 E-value=6.3e-26 Score=269.90 Aligned_cols=204 Identities=16% Similarity=0.135 Sum_probs=159.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccc----------cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 172 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~ 172 (1620)
.++|++.++||+|+||.||+|.+.... .....+..||+|.+.... ......++. +|+++|.
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~ 74 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFL--------KEVKILS 74 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHH--------HHHHHHh
Confidence 458999999999999999999853211 011245689999987632 233334455 8999999
Q ss_pred cCCcccccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHH
Q 000355 173 CLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSP-----------------NALKSEWHVRFLMYQLLSAIAYL 234 (1620)
Q Consensus 173 ~l~HpNIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~-----------------~~~l~~~~i~~i~~qil~aL~yL 234 (1620)
+++||||+++++++.+.+..++||||++ ++|.+++.... ...++...+..++.||+.||.||
T Consensus 75 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 75 RLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred hcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 59999986421 12356677889999999999999
Q ss_pred HhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccc
Q 000355 235 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 314 (1620)
Q Consensus 235 H~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~ 314 (1620)
|++||+||||||+|||++.++ .+||+|||+++........ .......++..|||||++.+..++.++|+
T Consensus 155 H~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 155 SSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDYY---------RIQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred HHCCccccCcchhheEEcCCc--cEEECCCccceecccCcee---------EecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 999999999999999999998 8999999999843211100 01122335678999999988899999999
Q ss_pred ccccccchHHHHh
Q 000355 315 WWRGELSNFEYLL 327 (1620)
Q Consensus 315 W~~G~isnfeyL~ 327 (1620)
|+.|++. |++++
T Consensus 224 ~slG~~l-~el~~ 235 (304)
T cd05096 224 WAFGVTL-WEILM 235 (304)
T ss_pred HHHHHHH-HHHHH
Confidence 9999776 55543
No 324
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.93 E-value=4.2e-26 Score=274.88 Aligned_cols=189 Identities=18% Similarity=0.188 Sum_probs=149.5
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh-hhHHHHHHhcCCCcHhHHHhhccC---CcccccceeeEEE
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL---RHPNVAPVLGLLK 187 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~~~~~~~~~Ei~iL~~l---~HpNIv~l~~~~~ 187 (1620)
||+|+||+||+|++. .+++.||+|++.+..... ....... +|..++..+ +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKK------DTRRIYAMKVLSKKEIVAKKEVAHTI--------GERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEEeHHHHhhhhHHHHHH--------HHHHHHHHhccCCCCcCcceEEEEe
Confidence 799999999999862 457899999986532221 1112222 677777665 6999999999999
Q ss_pred eCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 188 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 188 ~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
+.+.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~ 142 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGL 142 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCc
Confidence 99999999999984 9999987 456789999999999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhccccc-ccccccccccccccchHHHHhhhh
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLN 330 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~-~y~~~~d~W~~G~isnfeyL~~ln 330 (1620)
++........ .....||+.|||||++.+. .|+.++|+|+.|++. |+++++..
T Consensus 143 a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil-~elltG~~ 195 (330)
T cd05586 143 SKANLTDNKT-----------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV-FEMCCGWS 195 (330)
T ss_pred CcCCCCCCCC-----------ccCccCCccccCHHHHcCCCCCCCccceeccccEE-EEeccCCC
Confidence 9843211100 1122378899999988654 589999999999876 55554433
No 325
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.93 E-value=9.8e-25 Score=244.65 Aligned_cols=277 Identities=19% Similarity=0.272 Sum_probs=217.4
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCe---E--EEeCCcEEEEe
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR---I--ASCDGTLHVWN 1341 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~---l--aS~DgtV~IWD 1341 (1620)
-|.+.|.+|... ++.++||+ |||++|+||.. |++..++.||+++|.+++|...+.. + ||.|.++++|.
T Consensus 103 ~hdDWVSsv~~~--~~~Iltgs----YDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~ 175 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGS----YDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWK 175 (423)
T ss_pred cchhhhhhhccc--CceEEEee----cCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEE
Confidence 399999999988 77999998 69999999984 8999999999999999998655443 4 56699999999
Q ss_pred CCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEE
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRF 1421 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrl 1421 (1620)
.+.++..-.... ...+|... |.++...++|..+++|+.|.+|++
T Consensus 176 ~~~~~~~~~~~~--------------------------~~~GHk~~----------V~sVsv~~sgtr~~SgS~D~~lki 219 (423)
T KOG0313|consen 176 WNVGENKVKALK--------------------------VCRGHKRS----------VDSVSVDSSGTRFCSGSWDTMLKI 219 (423)
T ss_pred ecCchhhhhHHh--------------------------Hhcccccc----------eeEEEecCCCCeEEeecccceeee
Confidence 887764321110 00022233 556666678999999999999999
Q ss_pred EECCCC-------------------------ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCC
Q 000355 1422 IDINQG-------------------------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG 1476 (1620)
Q Consensus 1422 wDl~tg-------------------------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg 1476 (1620)
|+..+. .++-++. +|...|.+|-|+. ...+.+++.|.
T Consensus 220 Ws~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~------GHt~~Vs~V~w~d------------~~v~yS~SwDH 281 (423)
T KOG0313|consen 220 WSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE------GHTEPVSSVVWSD------------ATVIYSVSWDH 281 (423)
T ss_pred cccCCCccccccccchhhhhhhhhhhcccccCceEEec------ccccceeeEEEcC------------CCceEeecccc
Confidence 993221 1122223 4666788888853 35799999999
Q ss_pred cEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCC-CeEeecCCCCEEE--EeecC-CE
Q 000355 1477 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ-PTVFKGHTNGISG--FSVWG-QD 1551 (1620)
Q Consensus 1477 ~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~-~~~l~gH~~~V~a--fSpdg-~~ 1551 (1620)
+|+.||+.+|..+.++.+ ....+++. ++..++|++||.|..|++||.+++.... ..++.||.+.|.+ ++|.. ..
T Consensus 282 TIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~ 360 (423)
T KOG0313|consen 282 TIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQ 360 (423)
T ss_pred eEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceE
Confidence 999999999999988884 57899999 9999999999999999999999975433 3589999999996 78865 56
Q ss_pred EEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1552 VISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1552 LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
|+|||.|+ +++||+...+ ..++... +|..-|.++.|+ .+..+++||.|++|+|+
T Consensus 361 ~~S~S~D~t~klWDvRS~k----------~plydI~---~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~ 415 (423)
T KOG0313|consen 361 LVSGSYDNTVKLWDVRSTK----------APLYDIA---GHNDKVLSVDWN-EGGLIVSGGADNKLRIF 415 (423)
T ss_pred EEEEecCCeEEEEEeccCC----------Ccceeec---cCCceEEEEecc-CCceEEeccCcceEEEe
Confidence 89999999 9999986321 1344443 588899999997 67799999999999986
No 326
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=1.5e-25 Score=279.64 Aligned_cols=190 Identities=20% Similarity=0.110 Sum_probs=158.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
...|.+.+.||+|+||.||+|.+. ..++.||||..... ... +|+++|++|+|||||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~------~~~~~vavK~~~~~--------~~~--------~E~~iL~~L~HpnIv~l 225 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHP------DYPQRVVVKAGWYA--------SSV--------HEARLLRRLSHPAVLAL 225 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEEC------CCCCEEEEeccccc--------CHH--------HHHHHHHHCCCCCCCcE
Confidence 457999999999999999999972 34688999964321 122 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++..++|||++.++|.+++.. ....++...++.|+.||+.||.|||++||+||||||+||||+.++ .+||+
T Consensus 226 ~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL~ 302 (461)
T PHA03211 226 LDVRVVGGLTCLVLPKYRSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICLG 302 (461)
T ss_pred EEEEEECCEEEEEEEccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEEc
Confidence 999999999999999999999999874 234689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||+++........ .......||+.|||||++.+..|+.++|+|+.|++. ||+++
T Consensus 303 DFGla~~~~~~~~~---------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL-~El~~ 357 (461)
T PHA03211 303 DFGAACFARGSWST---------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI-FEAAV 357 (461)
T ss_pred ccCCceeccccccc---------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHH-HHHHH
Confidence 99999853221100 001123478999999999999999999999999886 66554
No 327
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93 E-value=5.2e-25 Score=261.05 Aligned_cols=148 Identities=20% Similarity=0.235 Sum_probs=124.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+. .+++.+|||.+...... ....+++ +|+.++.++ .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK------KTGHVMAVKQMRRTGNK-EENKRIL--------MDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC------CCCeEEEEEEEeccCCh-HHHHHHH--------HHHHHHHhccCCCchHh
Confidence 578999999999999999999962 34788999999764322 2223333 677766666 4999999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++.+...+|+||||++++|.+++... ...+++..+..++.||++||.|||+ +||+||||||+||+++.++ .+|
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~--~~k 155 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG--NVK 155 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC--CEE
Confidence 99999999999999999998888887742 3478899999999999999999997 6999999999999999988 899
Q ss_pred EeecCCcc
Q 000355 261 ICDKPLVG 268 (1620)
Q Consensus 261 L~DFGla~ 268 (1620)
|+|||+++
T Consensus 156 L~dfg~~~ 163 (296)
T cd06618 156 LCDFGISG 163 (296)
T ss_pred ECccccch
Confidence 99999987
No 328
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.93 E-value=5.2e-26 Score=278.75 Aligned_cols=202 Identities=19% Similarity=0.145 Sum_probs=159.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|++... +...++..||+|.+..... ......+. +|+++++.+ +|||||+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~-~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~il~~l~~h~nIv~ 106 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGL-GKEDNVLRVAVKMLKASAH-TDEREALM--------SELKILSHLGQHKNIVN 106 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecC-CcccccceeEEEeccCCCC-HHHHHHHH--------HHHHHHHhhccCCceee
Confidence 45899999999999999999986322 2234567899999976432 22223334 899999999 8999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 211 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------- 211 (1620)
+++++...+.+++|||||+ |+|.++++...
T Consensus 107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 9999999999999999999 59999986321
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCC
Q 000355 212 -------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 272 (1620)
Q Consensus 212 -------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~ 272 (1620)
...++...++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~ 264 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMN 264 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccC
Confidence 12467788899999999999999999999999999999999988 899999999984321
Q ss_pred CCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 273 ADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
.... .....+.++..|||||++.+..|+.+.|+|+.|++. |+++
T Consensus 265 ~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil-~ell 308 (374)
T cd05106 265 DSNY---------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL-WEIF 308 (374)
T ss_pred Ccce---------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHH-HHHH
Confidence 1100 011223356679999999999999999999999765 5544
No 329
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.5e-28 Score=258.72 Aligned_cols=191 Identities=21% Similarity=0.294 Sum_probs=157.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+.+..+.||-|+||+||-++| -++|+.||+|++..-...-...+. .++|+++|..++|.||+.+
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTD------PRdgrrvalkK~pnvfq~L~s~kr--------vFre~kmLcfFkHdNVLSa 117 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTD------PRSGKRVALKKMPNVFQNLASCKR--------VFREIKMLSSFRHDNVLSL 117 (449)
T ss_pred cccCCCCCcccccceeEEEeccC------CCCccchhHhhcchHHHHHHHHHH--------HHHHHHHHHhhccccHHHH
Confidence 44667789999999999999887 257899999998643222222222 3499999999999999999
Q ss_pred eeEEEeCC-----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 183 LGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 183 ~~~~~~~~-----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+++.+... .+|.|.|.|..||..+|- ....++..+++-+++||++||+|||+.||+||||||.|+|++++.
T Consensus 118 LDILQPph~dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC-- 193 (449)
T KOG0664|consen 118 LDILQPANPSFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-- 193 (449)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc--
Confidence 99987654 689999999999999998 456789999999999999999999999999999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccc
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 321 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~is 321 (1620)
.+||||||+||........ .++.-.-|-+|+|||++.+ ..|+.++|+|+.|||.
T Consensus 194 vLKICDFGLARvee~d~~~----------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF 248 (449)
T KOG0664|consen 194 ILKICDFGLARTWDQRDRL----------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF 248 (449)
T ss_pred eEEecccccccccchhhhh----------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence 9999999999954322111 1233345789999998774 5699999999999995
No 330
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=6e-25 Score=265.28 Aligned_cols=278 Identities=17% Similarity=0.279 Sum_probs=231.5
Q ss_pred EeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEe
Q 000355 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWN 1341 (1620)
Q Consensus 1264 tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD 1341 (1620)
.++..+..|..++|+|.--+++++-- .|+|++||..-+.++..|.+|.++|..|+|+|....++|+ |-+|++|+
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslH----sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWn 79 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLH----SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWN 79 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeec----CceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEe
Confidence 45566788999999999999999875 7999999999999999999999999999999999998766 88999999
Q ss_pred CCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEE
Q 000355 1342 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRF 1421 (1620)
Q Consensus 1342 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrl 1421 (1620)
.++.+|+.++.+|- ..|..+.|+ +.-..|+++|.|.|||+
T Consensus 80 Yk~rrclftL~GHl------------------------------DYVRt~~FH----------heyPWIlSASDDQTIrI 119 (1202)
T KOG0292|consen 80 YKTRRCLFTLLGHL------------------------------DYVRTVFFH----------HEYPWILSASDDQTIRI 119 (1202)
T ss_pred cccceehhhhcccc------------------------------ceeEEeecc----------CCCceEEEccCCCeEEE
Confidence 99999998888763 234444554 45679999999999999
Q ss_pred EECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCC--------C-------
Q 000355 1422 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--------G------- 1486 (1620)
Q Consensus 1422 wDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~t--------g------- 1486 (1620)
|+..+++++..+.||. ..|.|..|.|.. ..++++|-|.+||+||+.. |
T Consensus 120 WNwqsr~~iavltGHn------HYVMcAqFhptE-----------DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~ 182 (1202)
T KOG0292|consen 120 WNWQSRKCIAVLTGHN------HYVMCAQFHPTE-----------DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMR 182 (1202)
T ss_pred EeccCCceEEEEecCc------eEEEeeccCCcc-----------ceEEEecccceEEEEeecchhccCCCCCCchhhhh
Confidence 9999999999999764 458888887544 5899999999999999852 1
Q ss_pred ------------c--EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecC
Q 000355 1487 ------------N--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG 1549 (1620)
Q Consensus 1487 ------------~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg 1549 (1620)
. .-..+.||+..|+-++ +|.-.+++||++|..|++|.....+-=.+-+.+||.+.|++ |+|..
T Consensus 183 ~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q 262 (1202)
T KOG0292|consen 183 GQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQ 262 (1202)
T ss_pred ccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCcc
Confidence 1 1234679999999999 99889999999999999999876543345588999999997 89999
Q ss_pred CEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcE
Q 000355 1550 QDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYL 1616 (1620)
Q Consensus 1550 ~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~I 1616 (1620)
.+++|.|.|+ |+|||+.+.. +. ..++ +..+.-+.++-+|...+||+|-+.|.+
T Consensus 263 ~lIlSnsEDksirVwDm~kRt---~v------~tfr-----rendRFW~laahP~lNLfAAgHDsGm~ 316 (1202)
T KOG0292|consen 263 DLILSNSEDKSIRVWDMTKRT---SV------QTFR-----RENDRFWILAAHPELNLFAAGHDSGMI 316 (1202)
T ss_pred ceeEecCCCccEEEEeccccc---ce------eeee-----ccCCeEEEEEecCCcceeeeecCCceE
Confidence 9999999999 9999997321 11 2221 234568999999999999999888765
No 331
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=8.8e-25 Score=238.14 Aligned_cols=283 Identities=16% Similarity=0.292 Sum_probs=229.2
Q ss_pred ccccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1218 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
...+.||.|.||.++.+... .+++|+|.|.+.+||.++ |.|+.++.||.++|++++|++.+.++++||. |++
T Consensus 141 vre~~GHkDGiW~Vaa~~tq---pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG----D~t 213 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQ---PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASG----DET 213 (481)
T ss_pred hhhhcccccceeeehhhcCC---cceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccC----Ccc
Confidence 45688999999987766543 469999999999999999 9999999999999999999999999999998 899
Q ss_pred EEEEeC------CC------------------------------C----eEEEEEecCCcceeEEEEeeCCCeE--EEeC
Q 000355 1297 VQKWEL------TR------------------------------I----NCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1334 (1620)
Q Consensus 1297 VrLWdl------~t------------------------------g----~~l~~l~gH~~~V~sV~f~~~~~~l--aS~D 1334 (1620)
..||.. .. | .++..++||.+.|.++.|...++.+ +|+|
T Consensus 214 aHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD 293 (481)
T KOG0300|consen 214 AHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWD 293 (481)
T ss_pred hHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecc
Confidence 999972 11 0 2466789999999999999888877 7889
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
.|..+||+++|+.+..+.+|.... +-+..+|..+++++++
T Consensus 294 RTAnlwDVEtge~v~~LtGHd~EL----------------------------------------tHcstHptQrLVvTsS 333 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNILTGHDSEL----------------------------------------THCSTHPTQRLVVTSS 333 (481)
T ss_pred ccceeeeeccCceeccccCcchhc----------------------------------------cccccCCcceEEEEec
Confidence 999999999999999999886442 2233445678899999
Q ss_pred CCCcEEEEECCCC-ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC-cEEEEE
Q 000355 1415 GNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASW 1492 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg-~~i~~l 1492 (1620)
.|.+.|+||.+.. ..+..|.||. ..|+++.|.. +..+++|++|.+|++||+++- .++.++
T Consensus 334 rDtTFRLWDFReaI~sV~VFQGHt------dtVTS~vF~~------------dd~vVSgSDDrTvKvWdLrNMRsplATI 395 (481)
T KOG0300|consen 334 RDTTFRLWDFREAIQSVAVFQGHT------DTVTSVVFNT------------DDRVVSGSDDRTVKVWDLRNMRSPLATI 395 (481)
T ss_pred cCceeEeccchhhcceeeeecccc------cceeEEEEec------------CCceeecCCCceEEEeeeccccCcceee
Confidence 9999999999843 3456677654 4578888753 246999999999999999974 578888
Q ss_pred EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCC--CeEeecCCCCEEE--Eeec--CCEEEEEeCCc-eEEEe
Q 000355 1493 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ--PTVFKGHTNGISG--FSVW--GQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1493 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~--~~~l~gH~~~V~a--fSpd--g~~LaSgs~D~-I~vwd 1564 (1620)
+ -+.+++.++ +..+..++.--.+..|++||+...+... ...-.||...|.| |.-+ -.-|++++.|+ +.=|+
T Consensus 396 R-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 396 R-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred e-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence 7 578899999 7667788888888899999997653221 2255789999986 4433 24578889998 98898
Q ss_pred cc
Q 000355 1565 LS 1566 (1620)
Q Consensus 1565 l~ 1566 (1620)
+.
T Consensus 475 in 476 (481)
T KOG0300|consen 475 IN 476 (481)
T ss_pred ec
Confidence 75
No 332
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.93 E-value=7e-25 Score=252.32 Aligned_cols=139 Identities=24% Similarity=0.300 Sum_probs=121.0
Q ss_pred eeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 112 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 112 LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
||+|+||.||++.+. .+++.+|+|.+........ ....+. +|+++++.++||||+++++.+..++
T Consensus 1 lg~G~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~~ 66 (250)
T cd05123 1 LGKGSFGKVLLVRKK------DTGKLYAMKVLKKKKIIKRKEVEHTL--------TERNILSRINHPFIVKLHYAFQTEE 66 (250)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEeehhhhcchHHHHHHH--------HHHHHHHHcCCCcHHHHHHHeecCC
Confidence 699999999999862 3578999999877544332 222333 8999999999999999999999999
Q ss_pred EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 191 LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 191 ~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
..++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++.
T Consensus 67 ~~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~ 141 (250)
T cd05123 67 KLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIKLTDFGLAK 141 (250)
T ss_pred eeEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC--cEEEeecCcce
Confidence 9999999996 699999983 44689999999999999999999999999999999999999998 89999999987
No 333
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.93 E-value=2.6e-25 Score=254.93 Aligned_cols=129 Identities=16% Similarity=0.027 Sum_probs=110.7
Q ss_pred eeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCCEEEE
Q 000355 115 CSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITS 194 (1620)
Q Consensus 115 G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~~~~l 194 (1620)
|.||.||+|++. .+++.+|+|.+...... . +|...+....||||+++++++...+..++
T Consensus 4 g~~~~v~~~~~~------~~~~~~~~K~i~~~~~~-------~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDT------RTQQTFILKGLRKSSEY-------S--------RERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEc------cCCcEEEEEeecchhhh-------h--------hHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 889999999972 46788999998763211 1 44444555679999999999999999999
Q ss_pred EEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 195 VIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 195 V~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
||||++| +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|++|||.+.
T Consensus 63 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~ 133 (237)
T cd05576 63 VLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG--HIQLTYFSRWS 133 (237)
T ss_pred EEecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEecccchh
Confidence 9999995 99999873 44589999999999999999999999999999999999999998 89999999876
No 334
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.93 E-value=1.1e-25 Score=276.08 Aligned_cols=203 Identities=17% Similarity=0.124 Sum_probs=159.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|+.... ....++..||||+++.... ......+. +|+++|..+ +||||++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGL-FKSDAAMTVAVKMLKPSAH-LTEREALM--------SELKVLSYLGNHINIVN 103 (375)
T ss_pred hHHeehhheecCCccceEEEEEEecc-ccCccceeEEEEeccCCcC-cHHHHHHH--------HHHHHHHHhcCCcceee
Confidence 34799999999999999999974211 1124567899999875432 22223344 899999999 8999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 211 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------- 211 (1620)
+++++...+..++|||||+ |+|.++++...
T Consensus 104 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 104 LLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred eeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 9999999999999999999 59999986421
Q ss_pred ------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 212 ------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 212 ------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a 261 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLA 261 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccc
Confidence 12467778889999999999999999999999999999999888 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+......... ......++..|||||++.+..++.++|+|+.|++. |+++.
T Consensus 262 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l-~ellt 311 (375)
T cd05104 262 RDIRNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL-WEIFS 311 (375)
T ss_pred eeccCccccc---------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHH-HHHHh
Confidence 8543211110 01122345679999999999999999999999776 55554
No 335
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.1e-24 Score=271.40 Aligned_cols=189 Identities=17% Similarity=0.063 Sum_probs=129.9
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccc----------cccccccEEEEEEecCCCCChhhHHHHHHh------cCCCcH
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRL------IGVPSF 165 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~------~~~~~~ 165 (1620)
..++|++.++||+|+||+||+|...-.. .....++.||||++..... ....++++. .....+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 4679999999999999999999741110 0123467899999865322 112222210 111234
Q ss_pred hHHHhhccCCccc-----ccceeeEEEe--------CCEEEEEEeCCC-CCHHHHHhhCCC-------------------
Q 000355 166 DESSVPGCLRHPN-----VAPVLGLLKT--------SGLITSVIPKTP-YTLENILQFSPN------------------- 212 (1620)
Q Consensus 166 ~Ei~iL~~l~HpN-----Iv~l~~~~~~--------~~~~~lV~E~~~-g~L~~~l~~~~~------------------- 212 (1620)
.|+.++.+++|.+ +++++++|.. .+..+|||||++ ++|.++++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 6777888787654 4677777653 356899999999 499998863211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceec
Q 000355 213 ---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 289 (1620)
Q Consensus 213 ---~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~ 289 (1620)
..++...++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....... ... .
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~----~~~------~ 368 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGIN----FNP------L 368 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCc----cCc------c
Confidence 1234556788999999999999999999999999999999998 899999999974321100 000 0
Q ss_pred ccccCccchhhhccc
Q 000355 290 GCSSQGLYADLKLSQ 304 (1620)
Q Consensus 290 ~~~gt~~Y~APEv~~ 304 (1620)
...+|+.|+|||++.
T Consensus 369 ~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 369 YGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCCcceeChhhhc
Confidence 111367899998764
No 336
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=4.8e-26 Score=267.19 Aligned_cols=196 Identities=15% Similarity=0.199 Sum_probs=161.9
Q ss_pred ccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC---cc
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HP 177 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~---Hp 177 (1620)
....+|..++.+|+|+||.|++|.++ ++..+|+||.|.+.+.-..--.+-. .+| +.--||+||..|+ |+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K------~n~~eVViK~I~KeRIL~DtWvrDr-kLG-tVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHK------ENNYEVVIKMIFKERILVDTWVRDR-KLG-TVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccccceeeeeccccccceEEEeeec------ccceEEEeeehhhhhhhhhhhhccc-ccC-ccchhHHHHHHhhhcCcc
Confidence 34568999999999999999999973 3468899999988655432211111 112 2237999999997 99
Q ss_pred cccceeeEEEeCCEEEEEEeCCC-C-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTP-Y-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~lV~E~~~-g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
||++++++|++++++||+||--. | ||+++|.+ +..++|.+++.|++|++.|+++||+.||||||||-||+.++.+|
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999999999999999876 6 99999994 56789999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccc-ccccccccccccc
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRGELS 321 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y-~~~~d~W~~G~is 321 (1620)
-+||+|||.|...+.. + .....||..|.|||++.+..| +..-|+|..|.+.
T Consensus 708 --~~klidfgsaa~~ksg--------p-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgill 759 (772)
T KOG1152|consen 708 --FVKLIDFGSAAYTKSG--------P-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL 759 (772)
T ss_pred --eEEEeeccchhhhcCC--------C-----cceeeeeccccchhhhCCCccCCCcchhhhhhhee
Confidence 7999999999853311 1 122458999999999999998 4588999999765
No 337
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93 E-value=2.2e-25 Score=260.04 Aligned_cols=197 Identities=16% Similarity=0.186 Sum_probs=158.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|+.+... ..+..+|+|.++... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~---~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 71 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPS---KRELPVAIHTLRAGC-SDKQRRGFL--------AEALTLGQFDHSNIVRL 71 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCC---CceeeEEEEecCCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 347999999999999999999863322 356889999987642 222333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++..++||||+++ +|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|+
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~--~~~l 148 (266)
T cd05064 72 EGVITRGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL--VCKI 148 (266)
T ss_pred EEEEecCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC--cEEE
Confidence 9999999999999999995 999998742 45688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
+|||.+......... . .....++..|+|||++.+..++.++|+|+.|++. |++
T Consensus 149 ~dfg~~~~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el 201 (266)
T cd05064 149 SGFRRLQEDKSEAIY----T------TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM-WEV 201 (266)
T ss_pred CCCcccccccccchh----c------ccCCCCceeecCHHHHhhCCccchhHHHHHHHHH-HHH
Confidence 999987742211000 0 0011245679999999999999999999999775 443
No 338
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.93 E-value=4.1e-25 Score=234.95 Aligned_cols=277 Identities=15% Similarity=0.177 Sum_probs=228.2
Q ss_pred ccccccCCCceec--c---CCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCC
Q 000355 1218 TSNLMKCEPWFWF--P---TPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1291 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~---Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~ 1291 (1620)
..+..||+-.|-. | .|+|.+ |++++.|+.--+-+-+ |.-+.++.||.++|++.....|...-||++.
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~f-----lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa-- 79 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYF-----LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA-- 79 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceE-----EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc--
Confidence 4567789888864 4 466665 9999999988777766 7899999999999999999999999999998
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCce-EEEEeccCCccccccCCCCCc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSI 1368 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~-i~~l~~~~~~~~~~~s~s~~~ 1368 (1620)
|=+.+|||.-||..+.+|. |..-|.+|+|+.+..++ ++.++.+||+|++..+. ...+
T Consensus 80 --dftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~----------------- 139 (334)
T KOG0278|consen 80 --DFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI----------------- 139 (334)
T ss_pred --cchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh-----------------
Confidence 8999999999999999987 99999999999998888 55599999999875432 1122
Q ss_pred ccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1369 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1369 ~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
.+++++|..+-|.. ..+.+++++.|++||+||.++|..++++. +...|++
T Consensus 140 -------------~ghtg~Ir~v~wc~----------eD~~iLSSadd~tVRLWD~rTgt~v~sL~-------~~s~VtS 189 (334)
T KOG0278|consen 140 -------------SGHTGGIRTVLWCH----------EDKCILSSADDKTVRLWDHRTGTEVQSLE-------FNSPVTS 189 (334)
T ss_pred -------------cCCCCcceeEEEec----------cCceEEeeccCCceEEEEeccCcEEEEEe-------cCCCCcc
Confidence 23455666665543 36788888999999999999999999887 3445777
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCC
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1527 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~ 1527 (1620)
+-.+ ++|.+ ++-...+.|.+||..+..+++..+ -...|.+.. +|+...+++|+.|..++.||..++
T Consensus 190 lEvs-----------~dG~i-lTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tg 256 (334)
T KOG0278|consen 190 LEVS-----------QDGRI-LTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTG 256 (334)
T ss_pred eeec-----------cCCCE-EEEecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCC
Confidence 7664 34444 455566789999999999988877 356677777 899999999999999999999998
Q ss_pred CCCCCeEe-ecCCCCEEE--EeecCCEEEEEeCCc-eEEEecc
Q 000355 1528 WPSQPTVF-KGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1528 ~~~~~~~l-~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
..+..+ +||.++|.| |+|||...++||.|| |++|.+.
T Consensus 257 --eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 257 --EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred --ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 445554 999999997 999999999999999 9999975
No 339
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=1.9e-25 Score=283.47 Aligned_cols=199 Identities=15% Similarity=0.095 Sum_probs=150.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEE--------------ecCC-CCChhhHHHHHHhcCCCcHhH
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNL--------------LIEG-KASGQESKNFLRLIGVPSFDE 167 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~--------------i~~~-~~~~~~~~~~~~~~~~~~~~E 167 (1620)
.++|++++.||+|+||+||+|..... .+...++|. +.+. +........+. +|
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--------~E 213 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRAS-----TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLE--------NE 213 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEecc-----chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHH--------HH
Confidence 56899999999999999999875321 111122221 1110 01111112222 89
Q ss_pred HHhhccCCcccccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000355 168 SSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 244 (1620)
Q Consensus 168 i~iL~~l~HpNIv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 244 (1620)
+.+|+.++|||||++++++...+..|+|||++.++|.+++.... ......+.++.|+.||+.||.|||++||+||||
T Consensus 214 i~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDL 293 (501)
T PHA03210 214 ILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDI 293 (501)
T ss_pred HHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 99999999999999999999999999999999999998876321 223456778899999999999999999999999
Q ss_pred CCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 245 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 245 KP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
||+|||++.++ .+||+|||+++........ ......||..|+|||++.+..|+.++|+|+.|++. |+
T Consensus 294 KP~NILl~~~~--~vkL~DFGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil-~e 360 (501)
T PHA03210 294 KLENIFLNCDG--KIVLGDFGTAMPFEKEREA----------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL-LD 360 (501)
T ss_pred CHHHEEECCCC--CEEEEeCCCceecCccccc----------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH-HH
Confidence 99999999999 8999999999854221100 01123478999999999999999999999999876 55
Q ss_pred HHh
Q 000355 325 YLL 327 (1620)
Q Consensus 325 yL~ 327 (1620)
++.
T Consensus 361 ll~ 363 (501)
T PHA03210 361 MLS 363 (501)
T ss_pred HHH
Confidence 553
No 340
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=2.7e-25 Score=247.40 Aligned_cols=279 Identities=21% Similarity=0.315 Sum_probs=222.4
Q ss_pred eeEEeecccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLH 1338 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~ 1338 (1620)
.+..|.||.+.|.|++=+|.. ..+||||. ||.|+|||+.+.+|..+++.|.+.|..|++.. +..+ ++.|++|+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~----DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSC----DGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVK 132 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhcccc----CceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecCCccee
Confidence 466789999999999999987 88999996 99999999999999999999999999999865 4444 66799999
Q ss_pred EEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCc
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dgt 1418 (1620)
.|.+.- ..+.++.+.+ . +..+..+.-++.++||+. .
T Consensus 133 ~wk~~~-~p~~tilg~s-------------------------------~----------~~gIdh~~~~~~FaTcGe--~ 168 (433)
T KOG0268|consen 133 QWKIDG-PPLHTILGKS-------------------------------V----------YLGIDHHRKNSVFATCGE--Q 168 (433)
T ss_pred eeeccC-Ccceeeeccc-------------------------------c----------ccccccccccccccccCc--e
Confidence 999763 4555554321 0 122223333567787765 4
Q ss_pred EEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCc
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1498 (1620)
Q Consensus 1419 VrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~ 1498 (1620)
|.+||.....++..+.-.. ..+.++.|++... ..|++|.+|+.|.+||+|+++++..+. -...
T Consensus 169 i~IWD~~R~~Pv~smswG~------Dti~svkfNpvET----------sILas~~sDrsIvLyD~R~~~Pl~KVi-~~mR 231 (433)
T KOG0268|consen 169 IDIWDEQRDNPVSSMSWGA------DSISSVKFNPVET----------SILASCASDRSIVLYDLRQASPLKKVI-LTMR 231 (433)
T ss_pred eeecccccCCccceeecCC------CceeEEecCCCcc----------hheeeeccCCceEEEecccCCccceee-eecc
Confidence 8999998888887776432 3477888876544 588999999999999999999887765 3345
Q ss_pred EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCc
Q 000355 1499 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQ 1574 (1620)
Q Consensus 1499 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~ 1574 (1620)
-+.|+ .|++-.+++|++|..++.+|++.-. ..+....+|.+.|.+ |||.|+.++|||.|+ |++|....+-+
T Consensus 232 TN~IswnPeafnF~~a~ED~nlY~~DmR~l~-~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S---- 306 (433)
T KOG0268|consen 232 TNTICWNPEAFNFVAANEDHNLYTYDMRNLS-RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS---- 306 (433)
T ss_pred ccceecCccccceeeccccccceehhhhhhc-ccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc----
Confidence 56788 8888899999999999999999863 667788999999995 999999999999999 99999863211
Q ss_pred ceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1575 HRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1575 ~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
..++-. +....|.+|.|+.|.+++++||+||.||+|
T Consensus 307 -----RdiYht----kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlW 342 (433)
T KOG0268|consen 307 -----RDIYHT----KRMQHVFCVKYSMDSKYIISGSDDGNVRLW 342 (433)
T ss_pred -----hhhhhH----hhhheeeEEEEeccccEEEecCCCcceeee
Confidence 122211 244679999999999999999999999999
No 341
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.93 E-value=2.5e-25 Score=257.37 Aligned_cols=194 Identities=22% Similarity=0.284 Sum_probs=161.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++++.||+|+||.||++.+. .+++.+|+|.+.............. +|+.+++.++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK------KNGQKVAVKIIDKSEIEEEEREENI--------REIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET------TTTEEEEEEEEESTTHHHHHHHHHH--------HHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC------CCCeEEEEEEeccccccccccchhh--------hhhhcccccccccccccccc
Confidence 889999999999999999972 4567899999987544333322333 79999999999999999999
Q ss_pred EEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+...+.+++||||+++ +|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .++|+||
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Df 142 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDF 142 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSG
T ss_pred cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc--ccccccc
Confidence 9999999999999997 9999998 456789999999999999999999999999999999999999988 8999999
Q ss_pred CCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-ccccccccccccccccchHHHHhhh
Q 000355 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 265 Gla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
|.+...... ........++..|+|||++. +..++.++|+|+.|.+. |++++..
T Consensus 143 g~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il-~~l~~~~ 196 (260)
T PF00069_consen 143 GSSVKLSEN-----------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIIL-YELLTGK 196 (260)
T ss_dssp TTTEESTST-----------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHH-HHHHHSS
T ss_pred ccccccccc-----------cccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 999742100 00122334688999999998 88899999999999775 5555533
No 342
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.92 E-value=1.9e-25 Score=243.66 Aligned_cols=276 Identities=18% Similarity=0.274 Sum_probs=224.7
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEE--------ecCCcceeEEEEeeCCCeEEEe--CCc
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY--------YGHEEVVNDICVLSSSGRIASC--DGT 1336 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l--------~gH~~~V~sV~f~~~~~~laS~--Dgt 1336 (1620)
|..+.+.|..|||||++|+|||. ||.|.+||..+|+..+.+ --|.++|.|++|+.+...+||+ ||.
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSv----DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGk 286 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSV----DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGK 286 (508)
T ss_pred ccccchhheeeCCCCceEeeccc----cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCc
Confidence 55667899999999999999998 999999999999765443 3488999999999999998655 999
Q ss_pred EEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECC
Q 000355 1337 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1416 (1620)
Q Consensus 1337 V~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~D 1416 (1620)
|++|.+.+|+|++.|... |+ ..|+|+.|+.|+..+++++.|
T Consensus 287 IKvWri~tG~ClRrFdrA-----------------------------Ht----------kGvt~l~FSrD~SqiLS~sfD 327 (508)
T KOG0275|consen 287 IKVWRIETGQCLRRFDRA-----------------------------HT----------KGVTCLSFSRDNSQILSASFD 327 (508)
T ss_pred EEEEEEecchHHHHhhhh-----------------------------hc----------cCeeEEEEccCcchhhccccc
Confidence 999999999999988631 11 237788888899999999999
Q ss_pred CcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE--c
Q 000355 1417 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--A 1494 (1620)
Q Consensus 1417 gtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~--g 1494 (1620)
.++|+--+.+|++++.++||. +.|+.+.|. ++|..++++++||+|++|+..+++++.+++ +
T Consensus 328 ~tvRiHGlKSGK~LKEfrGHs------Syvn~a~ft-----------~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 328 QTVRIHGLKSGKCLKEFRGHS------SYVNEATFT-----------DDGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred ceEEEeccccchhHHHhcCcc------ccccceEEc-----------CCCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 999999999999999999765 456666664 677899999999999999999999999998 4
Q ss_pred cCCcEEEEE-eC-CCCEEEEEeCCCcEEEEECCCCCCCCCeEeec----CCCCEEE-EeecCCEEEEEeCCc-eEEEecc
Q 000355 1495 HDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG----HTNGISG-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1495 H~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g----H~~~V~a-fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.+.+|++|. .| +...++.|...++|.|-++.. +.+.++.. -.+-|.| +||.|.++...+.|+ ++.|.+.
T Consensus 391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG---QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~ 467 (508)
T KOG0275|consen 391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG---QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVL 467 (508)
T ss_pred CcccceeEEEcCCCCceEEEEcCCCeEEEEeccc---eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEee
Confidence 567899998 44 456889999999999998864 22333322 1223554 999999999999999 8999875
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.|... .... -|...|-.++-+|...++|+=++||.+++|
T Consensus 468 -----sG~LE----~tl~-----VhEkdvIGl~HHPHqNllAsYsEDgllKLW 506 (508)
T KOG0275|consen 468 -----SGKLE----RTLP-----VHEKDVIGLTHHPHQNLLASYSEDGLLKLW 506 (508)
T ss_pred -----cCcee----eeee-----cccccccccccCcccchhhhhcccchhhhc
Confidence 22221 1111 266678899999999999999999999999
No 343
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-23 Score=226.20 Aligned_cols=286 Identities=16% Similarity=0.156 Sum_probs=221.0
Q ss_pred ccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeC-CCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1220 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKI-KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1220 ~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~-~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
-+.||+-.+.. +..+|.+ |.|++.|.+..+|-. +|+.+.++.||+++|+|++.+.+.+.++|||. |.+
T Consensus 5 ~l~GHERplTqiKyN~eGDL-----lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSA----D~t 75 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDL-----LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSA----DQT 75 (327)
T ss_pred ccccCccccceEEecCCCcE-----EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccc----cce
Confidence 35577777765 7777776 999999999999986 59999999999999999999999999999998 999
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeC------CcEEEEeCCCCceEEEEeccCCccccccCCCCCcc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCD------GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~D------gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
++|||+++|+++.+++ -..+|..+.|+.++.++ ++.| +.|.++|++....-. ..
T Consensus 76 ~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~--~s---------------- 136 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDI--DS---------------- 136 (327)
T ss_pred eEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhh--cc----------------
Confidence 9999999999999998 67899999999998887 5544 568888887432100 00
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE-eeCCCcccccCCccce
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~-l~~~~~~v~~~~~V~s 1448 (1620)
..++..+-...+.++.+.|.|-++.|++|..||.|..||+++|+.+.. -+. |...|+.
T Consensus 137 ---------------~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind 195 (327)
T KOG0643|consen 137 ---------------EEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKIND 195 (327)
T ss_pred ---------------cCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhh------hcccccc
Confidence 011111111223356666777899999999999999999999865432 232 4556888
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCc--EEEEECC
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKT--LRIWDLR 1525 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~Dgt--I~IWDl~ 1525 (1620)
++++ ++..++++||.|.+.++||.++.++++++. -..+|++.+ +|....++.|+...- |.-=+.+
T Consensus 196 ~q~s-----------~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r 263 (327)
T KOG0643|consen 196 LQFS-----------RDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTR 263 (327)
T ss_pred cccc-----------CCcceEEecccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeeccc
Confidence 8876 566899999999999999999999999998 578999999 887666665553322 2222222
Q ss_pred CCCC----------CCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1526 RNWP----------SQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1526 ~~~~----------~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.++. ..+..++||=++|+ +|+|+|+..+||+.|| |++.-++
T Consensus 264 ~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 264 AGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred ccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 2321 34457789999999 4999999999999999 9988765
No 344
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.6e-24 Score=265.56 Aligned_cols=241 Identities=15% Similarity=0.258 Sum_probs=196.6
Q ss_pred cCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCC-----------------------------------------
Q 000355 1223 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA----------------------------------------- 1259 (1620)
Q Consensus 1223 gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g----------------------------------------- 1259 (1620)
.|.+.||+ ||+||+| |||||.|+.|+||.+..
T Consensus 265 ah~gaIw~mKFS~DGKy-----LAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKY-----LASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCCCce-----eeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 79999998 9999998 99999999999998533
Q ss_pred --------------------ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCccee
Q 000355 1260 --------------------SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1319 (1620)
Q Consensus 1260 --------------------~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~ 1319 (1620)
+.+..++||.+.|..+.||.++ +|+|+|+ |+|||||++...+|+++|. |.+.|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSM----DKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSM----DKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccc----cccEEeecCCCcceeeEEe-cCCeeE
Confidence 0134677999999999999876 8999998 9999999999999999998 999999
Q ss_pred EEEEeeC-CCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCC
Q 000355 1320 DICVLSS-SGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1396 (1620)
Q Consensus 1320 sV~f~~~-~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~ 1396 (1620)
||+|+|- ++++.|+ ||.||||++...+.+.-.+. ..
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-----------------------------------------~~ 452 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-----------------------------------------RD 452 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeEeehhh-----------------------------------------hh
Confidence 9999995 4556554 99999999987665433221 13
Q ss_pred ceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCc---ccccCCccceEeeeCCCccccCcccCCCCEEEEEe
Q 000355 1397 LYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT---ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1473 (1620)
Q Consensus 1397 ~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~---~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs 1473 (1620)
.||++++.|||+..+.|+.+|.+++|+....+....+..+.. ...+. .|+.+.|.+... .-|++.+
T Consensus 453 lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~----------~~vLVTS 521 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDP----------DEVLVTS 521 (712)
T ss_pred hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCC----------CeEEEec
Confidence 478889999999999999999999999987776655432211 11233 799999876443 4688889
Q ss_pred cCCcEEEEECCCCcEEEEEEccCCcEEEEE---eCCCCEEEEEeCCCcEEEEECCC
Q 000355 1474 SSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRR 1526 (1620)
Q Consensus 1474 ~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~ 1526 (1620)
.|..|||||.++.+++..++|+...-..+. +.||+++++||+|..|++|+...
T Consensus 522 nDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 522 NDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 999999999999999999998755433333 67999999999999999999844
No 345
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.92 E-value=4.2e-25 Score=272.29 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=158.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
.++|++++.||+|+||.||+|++... +....+..||||++.... .......++ +|+++|+.+. ||||++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~-~~~~~~~~vavK~l~~~~-~~~~~~~~~--------~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGL-SRSQPVMKVAVKMLKPTA-RSSEKQALM--------SELKIMTHLGPHLNIVN 105 (400)
T ss_pred ccceehhheecCCCCceEEEEEEccc-CCCCCceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhcCCCCCeee
Confidence 45899999999999999999986221 122345679999996532 222233444 8999999996 999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 211 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------- 211 (1620)
+++++...+.+|||||||+ |+|.+++....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 9999999999999999999 59999886421
Q ss_pred ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 212 ---------------------------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 212 ---------------------------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
...+++..+..++.||+.||.|||+++|+||||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp 265 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA 265 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 12367778889999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++.......... .....++..|||||++.+..++.++|+|+.|++. |+++
T Consensus 266 ~Nill~~~~--~~kL~DfGla~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil-~ell 333 (400)
T cd05105 266 RNVLLAQGK--IVKICDFGLARDIMHDSNYVS---------KGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL-WEIF 333 (400)
T ss_pred HhEEEeCCC--EEEEEeCCcceeccccccccc---------cCCcCCCcceEChhhhcCCCCCchhhHHHHHHHH-HHHH
Confidence 999999988 899999999984322111000 1111245679999999999999999999999776 5554
No 346
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=280.82 Aligned_cols=209 Identities=13% Similarity=0.094 Sum_probs=160.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~l 182 (1620)
-++++.+.|.+|+|+.||+|++. ..+..+|+|++... ...+.+... +||++|+.|+ |+|||.+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~------~~~~~~AlKrm~~~--de~~L~~v~--------~EI~~MK~L~gh~nIV~y 100 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDV------KGGKKYALKRMYVN--DEEALNAVK--------REIDIMKLLSGHKNIVSY 100 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEec------CCCceeeeeeeecC--CHHHHHHHH--------HHHHHHHHhcCCCceeeE
Confidence 37888999999999999999972 23388999998763 333333333 9999999997 9999999
Q ss_pred eeE-EEeC------CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCceEec
Q 000355 183 LGL-LKTS------GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~-~~~~------~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~ 252 (1620)
+|. .... -.++|.||||. |.|-+++.......|+|.++..|++|+++|+.+||... |||||||-|||||+
T Consensus 101 idss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls 180 (738)
T KOG1989|consen 101 IDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS 180 (738)
T ss_pred eccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc
Confidence 993 2211 26889999999 59999998655566999999999999999999999987 99999999999999
Q ss_pred CCCceEEEEeecCCcccCCCCCcccCCCCCCcc--ceecccccCccchhhhcc---cccccccccccccccccchHHHHh
Q 000355 253 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG--CCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~--~~~~~~~gt~~Y~APEv~---~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
.++ +.||||||.|.......+. ..+.. ...-...+|+.|+|||++ .+.+.+++.|+|..|||. |-.+-
T Consensus 181 ~~g--~~KLCDFGSatt~~~~~~~----~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL-YkLCy 253 (738)
T KOG1989|consen 181 ADG--NYKLCDFGSATTKILSPTS----AQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL-YKLCY 253 (738)
T ss_pred CCC--CEEeCcccccccccCCCcc----HHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH-HHHHH
Confidence 999 8999999999843222110 00000 001112368999999965 588999999999999997 44444
Q ss_pred hhhcccCC
Q 000355 328 FLNKLAGR 335 (1620)
Q Consensus 328 ~ln~~~gR 335 (1620)
+-.+|.+-
T Consensus 254 ~t~PFe~s 261 (738)
T KOG1989|consen 254 FTTPFEES 261 (738)
T ss_pred hCCCcCcC
Confidence 44455443
No 347
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.92 E-value=1.2e-24 Score=251.81 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=160.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||++.+. .++..+|+|.++.... ......+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV------NSDQKYAMKEIRLPKS-SSAVEDSR--------KEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc------CCCceEEEEEEEcCcc-hHHHHHHH--------HHHHHHHhCCCCCcceEEE
Confidence 5889999999999999999862 3578899999865432 22233333 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
.+.+++.+|+||||++ ++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++.++ .++|+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~--~~~l~d 143 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG--KVKLGD 143 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC--cEEEcc
Confidence 9999999999999998 4999998754556689999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
||+++....... ......+++.|+|||++.+..++.++|+|+.|.+. |+++..
T Consensus 144 fg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~-~~l~~g 196 (255)
T cd08219 144 FGSARLLTSPGA-----------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL-YELCTL 196 (255)
T ss_pred cCcceeeccccc-----------ccccccCCccccCHHHHccCCcCchhhhhhhchhh-eehhhc
Confidence 999874321110 11123467889999999999999999999999765 444433
No 348
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=3.2e-24 Score=262.94 Aligned_cols=241 Identities=23% Similarity=0.405 Sum_probs=192.8
Q ss_pred eeEEee-cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC--------------------------------C--
Q 000355 1261 ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR--------------------------------I-- 1305 (1620)
Q Consensus 1261 ~l~tl~-gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t--------------------------------g-- 1305 (1620)
..+.+. +|.++|+++.||+||++|||||. |+.||||.+.. .
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 345566 89999999999999999999998 99999998643 0
Q ss_pred --------------------------eEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCceEEEEeccCCcc
Q 000355 1306 --------------------------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDS 1358 (1620)
Q Consensus 1306 --------------------------~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~i~~l~~~~~~~ 1358 (1620)
+++..|.||.+.|.+|.|+.++-.| +|-|+|||+|++...+|+++|..
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~H----- 408 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSH----- 408 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEec-----
Confidence 2355678999999999997766666 66699999999999999999873
Q ss_pred ccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEec-CCCEEEEEECCCcEEEEECCCCceeEEeeCCC
Q 000355 1359 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVVGIGNGSLRFIDINQGQKLHLWRGEP 1437 (1620)
Q Consensus 1359 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~-dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~ 1437 (1620)
++.|||++|+| |.+++++|+-||.||||++...+.+.-..
T Consensus 409 ------------------------------------ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D--- 449 (712)
T KOG0283|consen 409 ------------------------------------NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND--- 449 (712)
T ss_pred ------------------------------------CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh---
Confidence 23466666666 78899999999999999998766554333
Q ss_pred cccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc--c------CCcEEEEE-eCC-C
Q 000355 1438 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA--H------DGYVTKLA-APE-D 1507 (1620)
Q Consensus 1438 ~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g--H------~~~V~sva-spd-g 1507 (1620)
....|+++||. |+|+..+.|+-+|.+++|+++..+....+.- | ...|+.+. .|. .
T Consensus 450 ----l~~lITAvcy~-----------PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~ 514 (712)
T KOG0283|consen 450 ----LRDLITAVCYS-----------PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP 514 (712)
T ss_pred ----hhhhheeEEec-----------cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC
Confidence 23569999986 7789999999999999999998887766531 1 12799988 432 3
Q ss_pred CEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC---CEEE-EeecCCEEEEEeCCc-eEEEecc
Q 000355 1508 HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISG-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1508 ~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~a-fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
..++..|.|..|+|+|.++. ..+..++|+.. .+.+ |+.||++|++|++|. |++|++.
T Consensus 515 ~~vLVTSnDSrIRI~d~~~~--~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 515 DEVLVTSNDSRIRIYDGRDK--DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred CeEEEecCCCceEEEeccch--hhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence 35666778999999999876 45567777654 3554 999999999999999 9999973
No 349
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.1e-25 Score=268.30 Aligned_cols=216 Identities=16% Similarity=0.095 Sum_probs=166.4
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCC-CChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGK-ASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+-.+.++||+|+||+||+|+-....+ .....||||..+... .......+++ +|.++|+.++|||||++|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~--~~~~~VAvK~~k~~~~~~~~~~~e~m--------~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNG--FKVVPVAVKTTKGSSELTKEQIKEFM--------KEARVMRQLNHPNVVRFY 227 (474)
T ss_pred CccccceeecccccEEEEEEEEecCC--ceeeeeEEEeecccccccHHHHHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 44556999999999999999643221 011228999987632 4455566666 999999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
|+...+..++||||+|.| +|.++|+..++ .++..+...++.+.+.||+|||++++|||||-..|+|++.++ .+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~--~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG--VVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC--eEEeC
Confidence 999999999999999995 99999995433 588999999999999999999999999999999999999998 78999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh-hhhcccCCCCCCCc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL-FLNKLAGRRWGDYT 341 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~-~ln~~~gRs~~dl~ 341 (1620)
|||+++......... ..|.-...|+|||.+....|+.++|+|+.|.+. ||... .- .+|....
T Consensus 305 DFGLs~~~~~~~~~~-----------~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~-~Eif~~g~-----~Py~g~~ 367 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMKK-----------FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL-WEIFENGA-----EPYPGMK 367 (474)
T ss_pred ccccccCCcceeecc-----------ccccCcceecChhhhccCccccccchhheeeeE-EeeeccCC-----CCCCCCC
Confidence 999998543111111 112234569999999999999999999999665 33222 11 1344445
Q ss_pred CCcccceee
Q 000355 342 FHMVMPWVI 350 (1620)
Q Consensus 342 q~pv~pwv~ 350 (1620)
.+-+-.||.
T Consensus 368 ~~~v~~kI~ 376 (474)
T KOG0194|consen 368 NYEVKAKIV 376 (474)
T ss_pred HHHHHHHHH
Confidence 555666664
No 350
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.92 E-value=5e-25 Score=249.16 Aligned_cols=284 Identities=22% Similarity=0.226 Sum_probs=225.1
Q ss_pred ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe--EEEEEecCCcceeEEEEeeCCCeE--EEeCC
Q 000355 1260 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1335 (1620)
Q Consensus 1260 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~--~l~~l~gH~~~V~sV~f~~~~~~l--aS~Dg 1335 (1620)
.....+..|.+.|..+.|-++...|++||. |..|++|++..++ .+.++.|-.+.|+++.|.+++..+ +|.|+
T Consensus 166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~----Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~ 241 (459)
T KOG0288|consen 166 RALFVLDAHEGEVHDVEFLRNSDTLATGGS----DRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDK 241 (459)
T ss_pred hhhhhhhccccccceeEEccCcchhhhcch----hhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCC
Confidence 355678889999999999999889999997 9999999987666 677888999999999999998887 45599
Q ss_pred cEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEEC
Q 000355 1336 TLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1415 (1620)
Q Consensus 1336 tV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~ 1415 (1620)
++++|++...+...++.+|. +. |+++.+......+++|+.
T Consensus 242 ~~r~Wnvd~~r~~~TLsGHt------------------------------dk----------Vt~ak~~~~~~~vVsgs~ 281 (459)
T KOG0288|consen 242 NLRLWNVDSLRLRHTLSGHT------------------------------DK----------VTAAKFKLSHSRVVSGSA 281 (459)
T ss_pred ceeeeeccchhhhhhhcccc------------------------------cc----------eeeehhhccccceeeccc
Confidence 99999999999988888763 23 344444444555999999
Q ss_pred CCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc
Q 000355 1416 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1495 (1620)
Q Consensus 1416 DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH 1495 (1620)
|.+|++||+..+.|.+++-. .+.++.|+.. +..+++|..|++||+||.+++.+......+
T Consensus 282 DRtiK~WDl~k~~C~kt~l~-------~S~cnDI~~~-------------~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g 341 (459)
T KOG0288|consen 282 DRTIKLWDLQKAYCSKTVLP-------GSQCNDIVCS-------------ISDVISGHFDKKVRFWDIRSADKTRSVPLG 341 (459)
T ss_pred cchhhhhhhhhhheeccccc-------cccccceEec-------------ceeeeecccccceEEEeccCCceeeEeecC
Confidence 99999999999888876542 2335555542 247899999999999999999999999876
Q ss_pred CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeec----CCCCEEEEeecCCEEEEEeCCc-eEEEeccCCC
Q 000355 1496 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG----HTNGISGFSVWGQDVISISNNK-IGLSSLSKSA 1569 (1620)
Q Consensus 1496 ~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g----H~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~ 1569 (1620)
. .|+++. +.+|..+.|++.|.++.+.|+++......+.-.| |.-.-..|||++.++++||.|| |+||++.
T Consensus 342 g-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~--- 417 (459)
T KOG0288|consen 342 G-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVF--- 417 (459)
T ss_pred c-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEcc---
Confidence 5 999999 9999999999999999999999864333222222 2211114999999999999999 9999986
Q ss_pred CCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1570 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1570 ~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.|.. .+..+ +.+....|++++|+|-|..|++++.++.+.+|-
T Consensus 418 --tgKl----E~~l~---~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 418 --TGKL----EKVLS---LSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred --CceE----EEEec---cCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 2222 11111 111223799999999999999999999999993
No 351
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.92 E-value=6.2e-25 Score=265.52 Aligned_cols=202 Identities=17% Similarity=0.164 Sum_probs=158.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+.. .+...+++.||+|++.... .......+. +|+.+++++ +||||++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~-~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFG-IEKSASCRTVAVKMLKEGA-TASEYKALM--------TELKILIHIGHHLNVVN 75 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccc-cccccccceeeeeeccCCC-CHHHHHHHH--------HHHHHHHhhccCcchhh
Confidence 3589999999999999999987522 2223467899999986532 222333344 899999999 8999999
Q ss_pred eeeEEEeC-CEEEEEEeCCCC-CHHHHHhhCCC-----------------------------------------------
Q 000355 182 VLGLLKTS-GLITSVIPKTPY-TLENILQFSPN----------------------------------------------- 212 (1620)
Q Consensus 182 l~~~~~~~-~~~~lV~E~~~g-~L~~~l~~~~~----------------------------------------------- 212 (1620)
+++++... ..++++|||+++ +|.+++.....
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 99988654 578999999995 99999863211
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCC
Q 000355 213 ------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPT 280 (1620)
Q Consensus 213 ------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~ 280 (1620)
..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~--- 230 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV--- 230 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchh---
Confidence 2568888999999999999999999999999999999999988 89999999998542211100
Q ss_pred CCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 281 SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 281 ~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
......++..|||||++.+..|+.+.|+|+.|++. |+++
T Consensus 231 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l-~el~ 269 (337)
T cd05054 231 ------RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL-WEIF 269 (337)
T ss_pred ------hccCCCCCccccCcHHhcCCCCCccccHHHHHHHH-HHHH
Confidence 01123456789999999999999999999999776 5554
No 352
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=3.3e-24 Score=253.41 Aligned_cols=324 Identities=19% Similarity=0.226 Sum_probs=235.7
Q ss_pred EEEEcCCCCEEEEeCC---Cc----eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC--eEEEEEec
Q 000355 1243 LGRVGGLKDESPWKIK---AS----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NCVSGYYG 1313 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~---g~----~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg--~~l~~l~g 1313 (1620)
|.|||.||.|++|++. +. ...+++.|.+.|+.++...+++.|+|||. |-||++|+...+ -|+.++..
T Consensus 40 LfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss----DtTVK~W~~~~~~~~c~stir~ 115 (735)
T KOG0308|consen 40 LFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS----DTTVKVWNAHKDNTFCMSTIRT 115 (735)
T ss_pred EEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC----CceEEEeecccCcchhHhhhhc
Confidence 9999999999999976 22 58889999999999999999999999998 899999999877 68899999
Q ss_pred CCcceeEEEE-eeCCCeEEEe--CCcEEEEeCCCCc--eEEEEeccCCccccccCCCCCcccccccccccccccCCCCCe
Q 000355 1314 HEEVVNDICV-LSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1388 (1620)
Q Consensus 1314 H~~~V~sV~f-~~~~~~laS~--DgtV~IWD~~tg~--~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1388 (1620)
|++.|.|+++ .++...+||+ |+.|.+||+++|. .+..+..-... ..++ +...+|
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~----sl~s-----------------G~k~si 174 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVN----SLGS-----------------GPKDSI 174 (735)
T ss_pred ccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccc----cCCC-----------------CCccce
Confidence 9999999998 5566666777 9999999999883 34333321100 0000 223344
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCE
Q 000355 1389 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1468 (1620)
Q Consensus 1389 ~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~ 1468 (1620)
.+.+ -++.|..+++|+..+.+++||.++++.+..++||... |+++-.. .+|..
T Consensus 175 YSLA----------~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdN------Vr~ll~~-----------dDGt~ 227 (735)
T KOG0308|consen 175 YSLA----------MNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDN------VRVLLVN-----------DDGTR 227 (735)
T ss_pred eeee----------cCCcceEEEecCcccceEEeccccccceeeeeccccc------eEEEEEc-----------CCCCe
Confidence 4444 4456889999999999999999999999999977654 7777654 67789
Q ss_pred EEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--E
Q 000355 1469 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--F 1545 (1620)
Q Consensus 1469 LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--f 1545 (1620)
+++|++||+|++||+....++.++..|+..|+++. +|+-..+.+|+.||.|..=|+++.. +. ..+--...+|.. .
T Consensus 228 ~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~-~~-tlick~daPv~~l~~ 305 (735)
T KOG0308|consen 228 LLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA-KS-TLICKEDAPVLKLHL 305 (735)
T ss_pred EeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCch-hh-eEeecCCCchhhhhh
Confidence 99999999999999999999999999999999999 8888999999999999999999852 11 111112233432 2
Q ss_pred eecCCEEEEEeCCc-eEEEeccCCCC--CCCcceeecc----ceeee----cCCCCccccEEEEEEecCCCEEEEEeCCC
Q 000355 1546 SVWGQDVISISNNK-IGLSSLSKSAD--EDGQHRLVPQ----KLYMV----DNGAKNLSVLSSISILPFSRLFLVGTEDG 1614 (1620)
Q Consensus 1546 Spdg~~LaSgs~D~-I~vwdl~~~~~--~~g~~~~~~~----kl~~~----~~g~~h~~~V~svafsPdg~lLasgs~DG 1614 (1620)
+-+.+-+=+++.|. |.-|....... ..|......+ ..... ..-....-.|...+.+.|.|.++|=...|
T Consensus 306 ~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~g 385 (735)
T KOG0308|consen 306 HEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKG 385 (735)
T ss_pred ccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCC
Confidence 21222223455566 88887653211 0111000000 00000 00000112466677788999999999999
Q ss_pred cEEEcC
Q 000355 1615 YLRLCC 1620 (1620)
Q Consensus 1615 ~IrlWd 1620 (1620)
.+.+||
T Consensus 386 nv~lwD 391 (735)
T KOG0308|consen 386 NVALWD 391 (735)
T ss_pred CEEEEE
Confidence 999997
No 353
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.92 E-value=7.1e-25 Score=257.65 Aligned_cols=203 Identities=15% Similarity=0.116 Sum_probs=161.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|...... .......+|+|.+.... .......+. +|+.++..++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~~~v~~K~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~i~~~ 73 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPN-ERLSATSVAIKTLKENA-EPKVQQEFR--------QEAELMSDLQHPNIVCL 73 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCC-CCcceeeEEEEecccCC-CHHHHHHHH--------HHHHHHHhcCCcccceE
Confidence 457999999999999999999863221 12345789999987532 222233344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPN--------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++...+..+++|||++ ++|.+++..... ..+++..+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05048 74 LGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR 153 (283)
T ss_pred EEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence 999999999999999998 599999974211 45788889999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||++.++ .+||+|||+++......... ......+++.|||||.+.+..++.++|+|+.|++. |+++.
T Consensus 154 Nil~~~~~--~~~L~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il-~el~~ 221 (283)
T cd05048 154 NCLVGEGL--TVKISDFGLSRDIYSADYYR---------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL-WEIFS 221 (283)
T ss_pred eEEEcCCC--cEEECCCcceeecccccccc---------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHH-HHHHc
Confidence 99999998 89999999998432111000 01122356789999999888999999999999876 66654
No 354
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.92 E-value=1.3e-24 Score=255.72 Aligned_cols=202 Identities=16% Similarity=0.193 Sum_probs=159.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|...... ...+..+|+|.+... ........+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~--~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~niv~~ 72 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPG--MDHAQLVAIKTLKDI-NNPQQWGEFQ--------QEASLMAELHHPNIVCL 72 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCC--CCCcceEEEEeccCC-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 467899999999999999999853221 245788999998753 2223333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP---------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
++++...+..|+||||++ ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 152 (283)
T cd05090 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAA 152 (283)
T ss_pred EEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcccc
Confidence 999999999999999998 59999985321 12467888899999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++......... ......++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 153 ~nili~~~~--~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~ 220 (283)
T cd05090 153 RNILIGEQL--HVKISDLGLSREIYSADYYR---------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL-WEIF 220 (283)
T ss_pred ceEEEcCCC--cEEeccccccccccCCccee---------cccCCCccceecChHHhccCCCCchhhhHHHHHHH-HHHH
Confidence 999999988 89999999998542211100 01112245679999999888899999999999776 5555
Q ss_pred h
Q 000355 327 L 327 (1620)
Q Consensus 327 ~ 327 (1620)
.
T Consensus 221 ~ 221 (283)
T cd05090 221 S 221 (283)
T ss_pred c
Confidence 3
No 355
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.92 E-value=3.7e-25 Score=251.23 Aligned_cols=201 Identities=17% Similarity=0.190 Sum_probs=166.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCc--cc--
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PN-- 178 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~H--pN-- 178 (1620)
..+|++++.+|+|+||.|-+|.+.. .+..||||+++.-.. .++ .++-|+++|+++.+ |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~------~~~~vAlKIik~V~k----Yre-------Aa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRE------TKEHVALKIIKNVDK----YRE-------AALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecC------CCceehHHHHHHHHH----Hhh-------HHHHHHHHHHHHHhcCCCCc
Confidence 5699999999999999999999733 378999999865221 111 12379999999943 43
Q ss_pred --ccceeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC-
Q 000355 179 --VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC- 255 (1620)
Q Consensus 179 --Iv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~- 255 (1620)
+|++.++|...++.+||+|.++-+++++++.+....++..+++.+++||+.+++|||+.+++|-||||||||+.+..
T Consensus 151 ~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 88999999999999999999988999999977778899999999999999999999999999999999999985321
Q ss_pred -----------------ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccccccccccccccc
Q 000355 256 -----------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 318 (1620)
Q Consensus 256 -----------------~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G 318 (1620)
...+||+|||.|+...... ...++|..|+|||++.+.+|+..||+|+.|
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------------STIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccCc--------------ceeeeccccCCchheeccCcCCccCceeee
Confidence 1268999999998543221 123478899999999999999999999999
Q ss_pred ccchHHHHhhhhcccCC
Q 000355 319 ELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 319 ~isnfeyL~~ln~~~gR 335 (1620)
||. +||.++.-.|.+-
T Consensus 297 CIL-~ElytG~~LFqtH 312 (415)
T KOG0671|consen 297 CIL-VELYTGETLFQTH 312 (415)
T ss_pred eEE-EEeeccceecccC
Confidence 998 7777776666543
No 356
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-25 Score=240.75 Aligned_cols=209 Identities=16% Similarity=0.144 Sum_probs=162.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.+.+.||+|+|+.||+++. ..++..+|+|++.-.. .++.+..+ +|++..++++||||+++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~------~s~~~~YAlKkI~c~~--~~~~e~~~--------rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKG------LSTGHLYALKKILCHS--QEDIEEAL--------REIDNHRKFNSPNVLRL 83 (302)
T ss_pred CceEEEeeeecCCCceeeeeecc------cCcccchhhheeeccc--hHHHHHHH--------HHHHHHHhhCCcchHHH
Confidence 45899999999999999999884 4678899999986532 33444444 99999999999999999
Q ss_pred eeEEEeC-----CEEEEEEeCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCceEec
Q 000355 183 LGLLKTS-----GLITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 252 (1620)
Q Consensus 183 ~~~~~~~-----~~~~lV~E~~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~ 252 (1620)
+++...+ ...||+++|.. |+|.+.|... ++..++|.++..|+.+|++||++||+.. ++||||||.|||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls 163 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS 163 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec
Confidence 9876543 35999999987 8999999853 3446899999999999999999999998 99999999999999
Q ss_pred CCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---ccccccccccccccccchHHHHhhh
Q 000355 253 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 253 ~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+++ .++|.|||.+......-.....+..-..+....| |..|+|||++. +...++++|+|+.||.. |.++-+.
T Consensus 164 ~~~--~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~C--t~pyRAPELf~vk~~~ti~ertDIWSLGCtL-Ya~mf~~ 238 (302)
T KOG2345|consen 164 DSG--LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERC--TIPYRAPELFNVKSHCTITERTDIWSLGCTL-YAMMFGE 238 (302)
T ss_pred CCC--ceEEEeccCccccceEeechHHHHHHHHHHHHhC--CCcccCchheecccCcccccccchhhhhHHH-HHHHHcC
Confidence 988 8999999999854332221111111112333333 46799999887 44567899999999876 5555444
Q ss_pred hcc
Q 000355 330 NKL 332 (1620)
Q Consensus 330 n~~ 332 (1620)
++|
T Consensus 239 sPf 241 (302)
T KOG2345|consen 239 SPF 241 (302)
T ss_pred Ccc
Confidence 443
No 357
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.92 E-value=1.4e-24 Score=260.04 Aligned_cols=200 Identities=19% Similarity=0.159 Sum_probs=155.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+.... ......||+|.++.. .......++. +|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~niv~~ 74 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEG--EKVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPHVCRL 74 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCC--CccceeEEEEecccc-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 457999999999999999999852211 112345899998653 2223334444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++... ..++|+||++ |+|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~--~~kl 150 (316)
T cd05108 75 LGICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ--HVKI 150 (316)
T ss_pred EEEEcCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC--cEEE
Confidence 9998765 5778999998 5999999842 34578888899999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++.......... .....++..|||||++.+..++.++|+|+.|.+. |+.++
T Consensus 151 ~DfG~a~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l-~el~t 206 (316)
T cd05108 151 TDFGLAKLLGADEKEYH---------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV-WELMT 206 (316)
T ss_pred ccccccccccCCCccee---------ccCCccceeecChHHhccCCCCchhhhHHHHHHH-HHHHc
Confidence 99999985432111100 0111235679999999999999999999999765 55443
No 358
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.92 E-value=1.5e-24 Score=251.21 Aligned_cols=191 Identities=16% Similarity=0.197 Sum_probs=155.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||++.. .++..+|+|.+...... ..++. +|+.+|+.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW-------RAQIKVAIKAINEGAMS---EEDFI--------EEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe-------ccCceEEEEecccCCcc---HHHHH--------HHHHHHHHCCCCCceeEE
Confidence 5688999999999999999875 33467999988654322 23344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+.+++||||++ |+|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG--VVKVS 142 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC--eEEEC
Confidence 99999999999999998 5999998742 34578889999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++........ ......++..|+|||++.+..++.++|.|+.|.+. |+.+
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l-~el~ 195 (256)
T cd05114 143 DFGMTRYVLDDEYT----------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM-WEVF 195 (256)
T ss_pred CCCCccccCCCcee----------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHH-HHHH
Confidence 99999843211100 01112245679999999988999999999999765 4443
No 359
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.92 E-value=1.2e-24 Score=252.59 Aligned_cols=194 Identities=15% Similarity=0.147 Sum_probs=158.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+++++||+|+||.||+|.. .++..+|+|.+..... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-------NNSTKVAVKTLKPGTM---SVQAFL--------EEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-------cCCceEEEEEccCCch---hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999985 3456799999865322 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..++||||++ ++|.+++.......++...+..++.|++.||.|||+++++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l 144 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKI 144 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC--cEEE
Confidence 999999999999999998 5999999865556688889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++........ ......++..|+|||.+.+..++.++|+|+.|++. |++++
T Consensus 145 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~t 199 (261)
T cd05072 145 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-YEIVT 199 (261)
T ss_pred CCCccceecCCCcee----------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHH-HHHHc
Confidence 999999853221100 00112245679999999888899999999999776 55443
No 360
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.92 E-value=1.9e-24 Score=253.53 Aligned_cols=203 Identities=15% Similarity=0.089 Sum_probs=158.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.-.. ....+..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVV-KDEPETRVAIKTVNEAA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCC-CCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 467999999999999999998863211 12346789999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
++++...+..++||||++ ++|.+++.... ...++...+..++.|++.||.|||++|++||||||+|||+++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 75 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 999999999999999999 59999997422 123466778889999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
++ .+||+|||+++.......... .....+++.|||||++.+..++..+|+|+.|++. |++++
T Consensus 155 ~~--~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~ 216 (277)
T cd05062 155 DF--TVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL-WEIAT 216 (277)
T ss_pred CC--CEEECCCCCccccCCcceeec---------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH-HHHHc
Confidence 98 899999999984322111000 0011246779999999988999999999999776 55554
No 361
>PTZ00420 coronin; Provisional
Probab=99.91 E-value=6.1e-23 Score=256.88 Aligned_cols=246 Identities=11% Similarity=0.064 Sum_probs=183.9
Q ss_pred EEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccC-CCEEEEeccCCCCCcEEEEEeCCCCe--------EEEEEecC
Q 000355 1245 RVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN--------CVSGYYGH 1314 (1620)
Q Consensus 1245 sgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspd-g~~LaSgs~d~~~DgtVrLWdl~tg~--------~l~~l~gH 1314 (1620)
.||.++.+++|+.. ...+..+.||.+.|.+++|+|+ +.+|+|||. |++|+|||+.++. ++..+.+|
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~----DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE----DLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC----CCeEEEEECCCCCccccccccceEEeecC
Confidence 46678899999976 5678899999999999999997 789999997 9999999997642 45578899
Q ss_pred CcceeEEEEeeCCCeE-E--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEE
Q 000355 1315 EEVVNDICVLSSSGRI-A--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1391 (1620)
Q Consensus 1315 ~~~V~sV~f~~~~~~l-a--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv 1391 (1620)
...|.+|+|+|++..+ + +.|++|+|||+++++.+..+..+
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~------------------------------------- 167 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP------------------------------------- 167 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC-------------------------------------
Confidence 9999999999988764 3 44999999999998866554311
Q ss_pred eecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEE
Q 000355 1392 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAA 1471 (1620)
Q Consensus 1392 ~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~Las 1471 (1620)
..+.+++|+++|..+++++.|++|++||+++++.+.++.+|.+. +.+.++. .+++++++++|++
T Consensus 168 ----~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~------~~s~~v~------~~~fs~d~~~IlT 231 (568)
T PTZ00420 168 ----KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGG------KNTKNIW------IDGLGGDDNYILS 231 (568)
T ss_pred ----CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCC------ceeEEEE------eeeEcCCCCEEEE
Confidence 12667778888999999999999999999999999999877653 2222211 1223356678888
Q ss_pred EecCC----cEEEEECCC-CcEEEEEEc--cCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEE
Q 000355 1472 GLSSG----QCRLFDVRS-GNVIASWRA--HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS 1543 (1620)
Q Consensus 1472 Gs~Dg----~I~lwD~~t-g~~i~~l~g--H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~ 1543 (1620)
++.|+ .|+|||+++ ++++..+.. +.+.+.... .++|.++++|+.|++|++|++..+....+..+. +..++.
T Consensus 232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~ 310 (568)
T PTZ00420 232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFR 310 (568)
T ss_pred EEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCcc
Confidence 77664 799999995 566666542 334444444 566889999999999999999876322222222 334444
Q ss_pred --EEeec
Q 000355 1544 --GFSVW 1548 (1620)
Q Consensus 1544 --afSpd 1548 (1620)
+|.|+
T Consensus 311 g~~f~Pk 317 (568)
T PTZ00420 311 SFGFLPK 317 (568)
T ss_pred ceEEccc
Confidence 46654
No 362
>PHA02988 hypothetical protein; Provisional
Probab=99.91 E-value=1.2e-24 Score=256.56 Aligned_cols=190 Identities=9% Similarity=-0.028 Sum_probs=155.0
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhH-HHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
..||+|++|.||+|.. +|+.||||.+.......... +.+. +|+.+|++++||||+++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~nIv~~~g~~~~ 89 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--------NNKEVIIRTFKKFHKGHKVLIDITE--------NEIKNLRRIDSNNILKIYGFIID 89 (283)
T ss_pred eEEeeCCceEEEEEEE--------CCEEEEEEeccccccccHHHHHHHH--------HHHHHHHhcCCCCEEEEeeeEEe
Confidence 5799999999999984 57899999997654333222 2333 89999999999999999999977
Q ss_pred ----CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEEEe
Q 000355 189 ----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 189 ----~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
...+++||||++| +|.+++. ....++......++.|++.||.|||+ .+++||||||+|||++.++ .+||+
T Consensus 90 ~~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~--~~kl~ 165 (283)
T PHA02988 90 IVDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY--KLKII 165 (283)
T ss_pred cccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC--cEEEc
Confidence 3478999999995 9999998 34567888889999999999999998 5999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc--cccccccccccccccchHHHHhhhhcccC
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~--~~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
|||+++...... ....++..|+|||++.+ ..|+.++|+|+.|++. |+++++..+|.+
T Consensus 166 dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil-~el~~g~~Pf~~ 224 (283)
T PHA02988 166 CHGLEKILSSPP--------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL-WEIFTGKIPFEN 224 (283)
T ss_pred ccchHhhhcccc--------------ccccCcccccCHHHhhhccccccchhhhhHHHHHH-HHHHHCCCCCCC
Confidence 999998432110 01236788999999976 6899999999999776 777766555544
No 363
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.91 E-value=2.5e-24 Score=251.09 Aligned_cols=199 Identities=15% Similarity=0.117 Sum_probs=156.5
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|+||.||+|..... ...+..+|+|+++...........+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 69 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQD---DGSQLKVAVKTMKLDIHTYSEIEEFL--------SEAACMKDFDHPNVMKLIGV 69 (273)
T ss_pred CccccccCcCCCceEEEEEEecC---CCCcceEEEEEeccCcCCHHHHHHHH--------HHHHHHHhCCCCCeeeEEee
Confidence 56789999999999999986221 12457899999876544444444555 89999999999999999998
Q ss_pred EEeCCE------EEEEEeCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 186 LKTSGL------ITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 186 ~~~~~~------~~lV~E~~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+...+. .++||||++ |+|..++... ....+++..+..++.|++.||.|||+++|+||||||+||+++++
T Consensus 70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED 149 (273)
T ss_pred eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence 866553 799999999 5999888542 22467899999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+ .+||+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|++. |++++
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il-~el~~ 210 (273)
T cd05035 150 M--TVCVADFGLSKKIYSGDYYRQ---------GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM-WEIAT 210 (273)
T ss_pred C--eEEECCccceeeccccccccc---------cccccCCccccCHhhcccCCCCcccchHHHHHHH-HHHHh
Confidence 8 899999999985432111000 0011135679999999988999999999999876 66554
No 364
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.91 E-value=8.8e-24 Score=230.42 Aligned_cols=287 Identities=17% Similarity=0.221 Sum_probs=221.3
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC------------C------eEEEEEecCCcceeEEEE
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR------------I------NCVSGYYGHEEVVNDICV 1323 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t------------g------~~l~~l~gH~~~V~sV~f 1323 (1620)
...+..|.+++++.+|++||.++||||. |..|+|.|++. | -.++++..|.+.|+++.|
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsa----D~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~F 180 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSA----DASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDF 180 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCC----cceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceee
Confidence 3457789999999999999999999998 89999999861 1 257888999999999999
Q ss_pred eeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEE
Q 000355 1324 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1401 (1620)
Q Consensus 1324 ~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1401 (1620)
+|....|+|+ |++|+++|...-...+.++.- . +...|.++
T Consensus 181 HPre~ILiS~srD~tvKlFDfsK~saKrA~K~~----------------------------q----------d~~~vrsi 222 (430)
T KOG0640|consen 181 HPRETILISGSRDNTVKLFDFSKTSAKRAFKVF----------------------------Q----------DTEPVRSI 222 (430)
T ss_pred cchhheEEeccCCCeEEEEecccHHHHHHHHHh----------------------------h----------ccceeeeE
Confidence 9999988554 999999998643322222110 0 11235666
Q ss_pred EEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEE
Q 000355 1402 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1481 (1620)
Q Consensus 1402 ~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lw 1481 (1620)
.++|.|.++++|..-.++|+||+.|.++.-.-.. .-.|...|++|.++ +.|++.++|+.||.|++|
T Consensus 223 SfHPsGefllvgTdHp~~rlYdv~T~QcfvsanP---d~qht~ai~~V~Ys-----------~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 223 SFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANP---DDQHTGAITQVRYS-----------STGSLYVTASKDGAIKLW 288 (430)
T ss_pred eecCCCceEEEecCCCceeEEeccceeEeeecCc---ccccccceeEEEec-----------CCccEEEEeccCCcEEee
Confidence 6777899999999999999999999887644321 12477778888876 566799999999999999
Q ss_pred ECCCCcEEEEEE-ccCCc-EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecC--CCCEE----E-EeecCCE
Q 000355 1482 DVRSGNVIASWR-AHDGY-VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH--TNGIS----G-FSVWGQD 1551 (1620)
Q Consensus 1482 D~~tg~~i~~l~-gH~~~-V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH--~~~V~----a-fSpdg~~ 1551 (1620)
|--+++++.++. +|.+. |.+.. ..||++++|.+.|.++++|.+.++ +.+.+..|- ++.+. + |+....+
T Consensus 289 DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~--R~l~~YtGAg~tgrq~~rtqAvFNhtEdy 366 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG--RMLKEYTGAGTTGRQKHRTQAVFNHTEDY 366 (430)
T ss_pred ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC--ceEEEEecCCcccchhhhhhhhhcCccce
Confidence 999999999986 77665 55544 889999999999999999999999 445555443 33222 2 7777777
Q ss_pred EEEEeCCc--eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1552 VISISNNK--IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1552 LaSgs~D~--I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
++.-.... +.-||.... .- ..++. -+|.+.++.+.-+|.+..|.+||+|-.+|+|
T Consensus 367 Vl~pDEas~slcsWdaRta-----dr----~~l~s----lgHn~a~R~i~HSP~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 367 VLFPDEASNSLCSWDARTA-----DR----VALLS----LGHNGAVRWIVHSPVEPAFMTCSDDFRARFW 423 (430)
T ss_pred EEccccccCceeeccccch-----hh----hhhcc----cCCCCCceEEEeCCCCCceeeecccceeeee
Confidence 77765433 888996521 11 11222 2699999999999999999999999999999
No 365
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.91 E-value=1.9e-24 Score=253.54 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=160.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.+.+.||+|+||.||+|.+... ....++..+|+|.++... ..+....+. +|+++|+.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 73 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHL-EPENDKELVAVKTLKETA-SNDARKDFE--------REAELLTNFQHENIVKF 73 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccc-cCcCCcceEEEEeecccC-CHHHHHHHH--------HHHHHHHhcCCCCchhe
Confidence 45788999999999999999986221 112456889999986532 222334444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
++++......++||||+++ +|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 74 YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred eeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9999999999999999984 9999997421 23477888999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|++.++ .+||+|||+++......... ......+++.|+|||++.+..++.++|+|+.|.+. |+++.
T Consensus 154 li~~~~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~e~~~ 219 (280)
T cd05049 154 LVGYDL--VVKIGDFGMSRDVYTTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL-WEIFT 219 (280)
T ss_pred EEcCCC--eEEECCcccceecccCccee---------cCCCCcccceecChhhhccCCcchhhhHHHHHHHH-HHHHh
Confidence 999998 89999999997432111100 01112246789999999999999999999999776 55554
No 366
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=3.5e-25 Score=279.72 Aligned_cols=208 Identities=19% Similarity=0.197 Sum_probs=158.3
Q ss_pred cccCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccc
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNI 179 (1620)
.+-..+|+.++.||+|+||.|||++++ -+|+.||||+|.... ......+.+ +|+.+|.+|+||||
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNK------lDGr~YAIKKIpl~~-s~~~~skI~--------rEVk~LArLnHpNV 539 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNK------LDGREYAIKKIPLKA-SDKLYSKIL--------REVKLLARLNHPNV 539 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeec------ccchhhhhhhccCch-HHHHHHHHH--------HHHHHHhhcCCcce
Confidence 345678999999999999999999974 378999999998753 333334444 89999999999999
Q ss_pred cceeeEEEe-------------------------------------------------------C---------------
Q 000355 180 APVLGLLKT-------------------------------------------------------S--------------- 189 (1620)
Q Consensus 180 v~l~~~~~~-------------------------------------------------------~--------------- 189 (1620)
|++|..+.. .
T Consensus 540 VRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e 619 (1351)
T KOG1035|consen 540 VRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEE 619 (1351)
T ss_pred eeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcc
Confidence 998764310 0
Q ss_pred -------------------------------------------------CEEEEEEeCCCC-CHHHHHhhCCCCCC-CHH
Q 000355 190 -------------------------------------------------GLITSVIPKTPY-TLENILQFSPNALK-SEW 218 (1620)
Q Consensus 190 -------------------------------------------------~~~~lV~E~~~g-~L~~~l~~~~~~~l-~~~ 218 (1620)
..+||-||||+- .|.+++++ +... ...
T Consensus 620 ~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d 697 (1351)
T KOG1035|consen 620 NDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRD 697 (1351)
T ss_pred cccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhH
Confidence 136889999996 66666663 2332 466
Q ss_pred HHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCC---CCCc-----ccCCCCCCccceecc
Q 000355 219 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNS---IADW-----CTIPTSPMIGCCIEG 290 (1620)
Q Consensus 219 ~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~---~~~~-----~~~~~~~~~~~~~~~ 290 (1620)
.++.+++||+.||.|+|++|||||||||.||++++++ .|||+|||+|.... .... ......... ...++
T Consensus 698 ~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~-~~~Ts 774 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSND-GDLTS 774 (1351)
T ss_pred HHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCC-ccccc
Confidence 7788999999999999999999999999999999998 89999999999622 1100 000011111 12456
Q ss_pred cccCccchhhhcccccc---cccccccccccccchHHHHhh
Q 000355 291 CSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 291 ~~gt~~Y~APEv~~~~~---y~~~~d~W~~G~isnfeyL~~ 328 (1620)
-.||..|+|||++.+.. |+.++|+++.|.|. ||++.-
T Consensus 775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVl-FEM~yP 814 (1351)
T KOG1035|consen 775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVL-FEMLYP 814 (1351)
T ss_pred ccceeeeecHHHhcccccccccchhhhHHHHHHH-HHHhcc
Confidence 67899999999998665 99999999999887 887743
No 367
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.91 E-value=3e-24 Score=253.49 Aligned_cols=202 Identities=15% Similarity=0.129 Sum_probs=160.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|.+.+.||+|+||.||++.+... ....++..+|+|.+... .......+. +|+.++++++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~-~~~~~~~~~~ik~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNL-CPEQDKILVAVKTLKDA--SDNARKDFH--------REAELLTNLQHEHIVKF 72 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccC-CCCCcceEEEEEecCCc--CHHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35789999999999999999975221 11235677999998653 223333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP-----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 250 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 250 (1620)
++++...+.+++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nil 152 (288)
T cd05093 73 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL 152 (288)
T ss_pred EEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 999999999999999998 59999997421 134889999999999999999999999999999999999
Q ss_pred ecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 251 LTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 251 l~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
++.++ .+||+|||+++........ .....+.++..|+|||++.+..++.++|+|+.|++. |++++
T Consensus 153 i~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il-~~l~t 217 (288)
T cd05093 153 VGENL--LVKIGDFGMSRDVYSTDYY---------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL-WEIFT 217 (288)
T ss_pred EccCC--cEEeccCCccccccCCcee---------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH-HHHHh
Confidence 99998 8999999999843211100 011223356789999999998999999999999776 55544
No 368
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.91 E-value=3e-24 Score=249.73 Aligned_cols=195 Identities=17% Similarity=0.178 Sum_probs=159.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+. ..+..+|+|.+.... ....++. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~~K~~~~~~---~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQL 67 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEe------cCCceEEEEEecCCc---hHHHHHH--------HHHHHHHhCCCCChhhe
Confidence 346889999999999999999862 356889999986432 2233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++.+++||||++ ++|.+++.......+++..++.++.|++.||.|||++||+||||||+|||+++++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl 145 (263)
T cd05052 68 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 145 (263)
T ss_pred EEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--cEEe
Confidence 999999999999999998 5999999755555688889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......+..|+|||.+.+..++..+|+|+.|++. |+.++
T Consensus 146 ~df~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~t 200 (263)
T cd05052 146 ADFGLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL-WEIAT 200 (263)
T ss_pred CCCccccccccceeec----------cCCCCCccccCCHHHhccCCCCchhHHHHHHHHH-HHHHc
Confidence 9999998543211000 0011234579999999999999999999999776 55443
No 369
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.91 E-value=2.4e-24 Score=262.19 Aligned_cols=194 Identities=19% Similarity=0.212 Sum_probs=158.6
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDT------VTGQNVAIKKLSRPFQNVTHAKRAY--------RELVLMKLVNHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEEC------CCCCEEEEEecCccccChhHHHHHH--------HHHHHHHhcCCCCCcc
Confidence 4678999999999999999999872 4578999999865333333333343 8999999999999999
Q ss_pred eeeEEEeC------CEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 182 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 182 l~~~~~~~------~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
++++|... ...|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 99998654 35799999999999998873 278999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
.+||+|||+++...... . .....+++.|+|||++.+..++.++|+|+.|++. |+++++
T Consensus 156 --~~kL~Dfg~~~~~~~~~----~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~~l~~g 213 (353)
T cd07850 156 --TLKILDFGLARTAGTSF----M--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM-GEMIRG 213 (353)
T ss_pred --CEEEccCccceeCCCCC----C--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHH-HHHHHC
Confidence 89999999998432110 0 1112367889999999999999999999999775 444443
No 370
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.91 E-value=3.5e-24 Score=249.86 Aligned_cols=195 Identities=16% Similarity=0.206 Sum_probs=156.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||+|.+.... ..+..+|+|.++... .......+. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 71 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPG---KREIPVAIKTLKAGY-TEKQRRDFL--------SEASIMGQFDHPNIIHLE 71 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCC---CCceEEEEEECCCCC-CHHHHHHHH--------HHHHHHHhCCCCCcceEE
Confidence 57899999999999999999863221 245689999986532 222233444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++.+++.+++||||+++ +|.+++... ...++...+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--~~~l~ 148 (267)
T cd05066 72 GVVTKSKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--VCKVS 148 (267)
T ss_pred EEEecCCccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--eEEeC
Confidence 999999999999999985 999999743 35678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||+++.......... .. ..-.++..|+|||.+.+..++.++|.|+.|++.
T Consensus 149 dfg~~~~~~~~~~~~~--~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 199 (267)
T cd05066 149 DFGLSRVLEDDPEAAY--TT------RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 199 (267)
T ss_pred CCCcccccccccceee--ec------CCCccceeecCHhHhccCccCchhhhHHHHHHH
Confidence 9999985432111000 00 001124579999999988999999999999775
No 371
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.91 E-value=3e-24 Score=254.00 Aligned_cols=204 Identities=18% Similarity=0.196 Sum_probs=161.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccccc----------ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG----------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 172 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~----------~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~ 172 (1620)
..+|++++.||+|+||.||+|.+....+ ....+..+|+|.+..... ......+. +|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~--------~e~~~l~ 74 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFL--------KEVKILS 74 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHH--------HHHHHHH
Confidence 4689999999999999999998643221 112456799999876422 23333444 8999999
Q ss_pred cCCcccccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 000355 173 CLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 242 (1620)
Q Consensus 173 ~l~HpNIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHR 242 (1620)
.++||||+++++++..++..++||||++ ++|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 75 RLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred hcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999998 49999997432 1257899999999999999999999999999
Q ss_pred CCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccch
Q 000355 243 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 322 (1620)
Q Consensus 243 DLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isn 322 (1620)
||||+||+++.++ .+||+|||+++.......... .....+++.|||||.+.+..++.++|+|+.|++.
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l- 222 (296)
T cd05051 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYRV---------QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL- 222 (296)
T ss_pred ccchhceeecCCC--ceEEccccceeecccCcceee---------cCcCCCCceecCHHHhhcCCCCccchhhhhHHHH-
Confidence 9999999999998 899999999984322111100 1122356789999999888899999999999765
Q ss_pred HHHHh
Q 000355 323 FEYLL 327 (1620)
Q Consensus 323 feyL~ 327 (1620)
|+.++
T Consensus 223 ~el~~ 227 (296)
T cd05051 223 WEILT 227 (296)
T ss_pred HHHHh
Confidence 55443
No 372
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.91 E-value=3.6e-24 Score=254.85 Aligned_cols=203 Identities=18% Similarity=0.147 Sum_probs=161.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||++.+.. ......+..+|+|.++.... ......+. +|+++++++ +||||++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~iv~ 103 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYG-LSKSDAVMKVAVKMLKPTAH-SSEREALM--------SELKIMSHLGNHENIVN 103 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEec-CCCCCceeEEEEEecCccCC-hHHHHHHH--------HHHHHHHhccCCCCcce
Confidence 4589999999999999999998521 11124567899999875422 22233344 899999999 7999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++++...+.+++||||++ |+|.++++......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 104 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~ 181 (302)
T cd05055 104 LLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK--IVK 181 (302)
T ss_pred EEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC--eEE
Confidence 9999999999999999998 5999999854444589999999999999999999999999999999999999888 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|+|||+++........ .......++..|+|||.+.+..++.++|+|+.|++. |+.++
T Consensus 182 l~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil-~el~t 238 (302)
T cd05055 182 ICDFGLARDIMNDSNY---------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL-WEIFS 238 (302)
T ss_pred ECCCcccccccCCCce---------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH-HHHHh
Confidence 9999999843221110 011123356789999999988999999999999776 55554
No 373
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.91 E-value=5.2e-24 Score=251.73 Aligned_cols=202 Identities=17% Similarity=0.198 Sum_probs=159.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||++...... .......+|+|.+.... ..+...++. +|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLD-NPNETSTVAVKMLKDDA-TEKDLSDLV--------SEMEMMKMIGKHKNIIN 80 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCC-CCCCceeEEEEEccCCC-CHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 357999999999999999999863221 12345789999987542 223333444 899999999 7999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
+++++..++.+++||||++ |+|.+++... ....+++..+..++.||+.||.|||++||+||||||
T Consensus 81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp 160 (293)
T cd05053 81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAA 160 (293)
T ss_pred EEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccce
Confidence 9999999999999999998 5999999631 235678889999999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++............ .-.++..|+|||++.+..++.++|+|+.|+|. |+.+
T Consensus 161 ~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 228 (293)
T cd05053 161 RNVLVTEDH--VMKIADFGLARDIHHIDYYRKTT---------NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL-WEIF 228 (293)
T ss_pred eeEEEcCCC--eEEeCccccccccccccceeccC---------CCCCCccccCHHHhccCCcCcccceeehhhHH-HHHh
Confidence 999999998 89999999998543211100000 01134579999999988999999999999876 5444
No 374
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.91 E-value=2.1e-24 Score=244.08 Aligned_cols=271 Identities=17% Similarity=0.231 Sum_probs=216.6
Q ss_pred ccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc---eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1222 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1222 ~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~g~---~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
.-|.+.|.. |-++... |+||+.|..|++|+..+. .+.+|.|-.++|++++|.+++++++++|. |+.
T Consensus 172 d~h~gev~~v~~l~~sdt-----latgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~----d~~ 242 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDT-----LATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASN----DKN 242 (459)
T ss_pred hccccccceeEEccCcch-----hhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecC----CCc
Confidence 346666654 5444333 999999999999998843 68899999999999999999999999996 999
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1374 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~ 1374 (1620)
+++|++...+...++.||++.|+++.|.-....+ +|.|.+||+||+..+.|.++.-..+.
T Consensus 243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~------------------ 304 (459)
T KOG0288|consen 243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQ------------------ 304 (459)
T ss_pred eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccccccc------------------
Confidence 9999999999999999999999999997766656 56699999999999888766542211
Q ss_pred ccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCC
Q 000355 1375 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1454 (1620)
Q Consensus 1375 ~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1454 (1620)
+.++. . .+..+++|..|++||+||.+++.++.....+. .|+++..+
T Consensus 305 -------------cnDI~----------~--~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-------~vtSl~ls-- 350 (459)
T KOG0288|consen 305 -------------CNDIV----------C--SISDVISGHFDKKVRFWDIRSADKTRSVPLGG-------RVTSLDLS-- 350 (459)
T ss_pred -------------ccceE----------e--cceeeeecccccceEEEeccCCceeeEeecCc-------ceeeEeec--
Confidence 11111 1 14478899999999999999999988776532 47777764
Q ss_pred CccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEcc----CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC
Q 000355 1455 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH----DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1455 ~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH----~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~ 1529 (1620)
++|.-|.+++.|.++.+.|+++.+...++.+- ....+.+. +|++.|+++||.||.|+||++.+++
T Consensus 351 ---------~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK- 420 (459)
T KOG0288|consen 351 ---------MDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK- 420 (459)
T ss_pred ---------cCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce-
Confidence 56678888899999999999999888887622 12256666 9999999999999999999999984
Q ss_pred CCCeEeecCCC--CEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1530 SQPTVFKGHTN--GISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1530 ~~~~~l~gH~~--~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
....+...+. .|++ |+|.|..|++++.++ +.+|.
T Consensus 421 -lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 421 -LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred -EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 4444544433 4775 888899999999999 99984
No 375
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.91 E-value=4.6e-24 Score=252.05 Aligned_cols=195 Identities=22% Similarity=0.259 Sum_probs=155.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+++++.++|+||+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~ni~~~ 68 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR------INGQLVALKVISMKTEE-GVPFTAI--------REASLLKGLKHANIVLL 68 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc------CCCcEEEEEEecccCcC-CCcHHHH--------HHHHHHHhcCCCCEeEE
Confidence 468999999999999999999862 35688999998654221 1112233 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 183 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
++++..++..|+||||++++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~ 145 (291)
T cd07870 69 HDIIHTKETLTFVFEYMHTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecccCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEe
Confidence 9999999999999999999988887642 34578888999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccchHHHHh
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||+++........ .....+++.|+|||++.+ ..++..+|+|+.|.+. |++++
T Consensus 146 Dfg~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l-~~l~~ 199 (291)
T cd07870 146 DFGLARAKSIPSQT-----------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF-IEMLQ 199 (291)
T ss_pred ccccccccCCCCCC-----------CCCccccccccCCceeecCCCCCcHHHHHHHHHHH-HHHHh
Confidence 99999843211100 011125778999998865 4578899999999665 44443
No 376
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.91 E-value=3.6e-24 Score=248.67 Aligned_cols=194 Identities=19% Similarity=0.149 Sum_probs=158.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.++..... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-------~~~~~v~iK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLW-------NNTTPVAVKTLKPGTMD---PKDFL--------AEAQIMKKLRHPKLIQL 66 (261)
T ss_pred hhheeeEEEecccCCccEEEEEe-------cCCeEEEEEeeCCCccc---HHHHH--------HHHHHHHHCCCCCccce
Confidence 35799999999999999999885 33567999998754322 23444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+++||||++ ++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l 144 (261)
T cd05068 67 YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN--ICKV 144 (261)
T ss_pred eEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC--CEEE
Confidence 999999999999999996 6999999854445688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++........ .. .....+..|+|||.+.+..++..+|+|+.|.+. |+.++
T Consensus 145 ~dfg~~~~~~~~~~~-----~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~t 199 (261)
T cd05068 145 ADFGLARVIKEDIYE-----AR-----EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILL-TEIVT 199 (261)
T ss_pred CCcceEEEccCCccc-----cc-----CCCcCceeccCccccccCCCCchhhHHHHHHHH-HHHHh
Confidence 999999854311100 00 011123569999999988999999999999776 44443
No 377
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91 E-value=1.6e-24 Score=254.91 Aligned_cols=203 Identities=15% Similarity=0.157 Sum_probs=158.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+... .....+..+|+|.+.... .......+. +|+.++..++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~ 73 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGT-APGEQTQAVAIKTLKDKA-EGPLREEFK--------HEAMMRSRLQHPNIVCL 73 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecC-CCCCceeEEEEEEccCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 34688899999999999999986321 112456889999987532 222222333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++.+.+..++++||++ ++|.+++... ....++...+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~ 153 (283)
T cd05091 74 LGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATR 153 (283)
T ss_pred EEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 999999999999999998 4999998521 1234778888999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||+++++ .+||+|||+++......... ......+++.|+|||.+.+..++..+|+|+.|++. |++++
T Consensus 154 Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l-~el~~ 221 (283)
T cd05091 154 NVLVFDKL--NVKISDLGLFREVYAADYYK---------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL-WEVFS 221 (283)
T ss_pred heEecCCC--ceEecccccccccccchhee---------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHH-HHHHc
Confidence 99999988 89999999998543211110 01112246789999999888899999999999776 55553
No 378
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=4.3e-26 Score=263.62 Aligned_cols=203 Identities=19% Similarity=0.243 Sum_probs=173.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+++++..||-|+||.|-+++.+- ....+|+|.+++.........+.+ +.|-+||..++.|.||+|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~------~~~~fAlKilkK~hIVdtkQqeHv-------~sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNS------QKATFALKILKKKHIVDTKQQEHV-------FSERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecc------cchHHHHHHHhHhhccchhHHHHH-------HhHHHHHHhcCchHHHHH
Confidence 4578889999999999999987421 123589999988777666555555 389999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
|-.|.++.++|++||-|- |+|..+++ ..+.+.+..+++|+..++.|++|||++|||.|||||+|+|++.+| .+||
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KL 561 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKL 561 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEE
Confidence 999999999999999876 59999998 678899999999999999999999999999999999999999999 7999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
.|||+|+......++ -++| |||.|.|||++.+...+.++|.|+.|.+. ||.|++-.+|+|-
T Consensus 562 VDFGFAKki~~g~KT-----------wTFc-GTpEYVAPEIILnKGHD~avDyWaLGIli-~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRKT-----------WTFC-GTPEYVAPEIILNKGHDRAVDYWALGILI-YELLTGSPPFSGV 622 (732)
T ss_pred eehhhHHHhccCCce-----------eeec-CCcccccchhhhccCcchhhHHHHHHHHH-HHHHcCCCCCCCC
Confidence 999999964322211 1334 59999999999999999999999999554 8888888777764
No 379
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.91 E-value=3.7e-24 Score=248.18 Aligned_cols=192 Identities=17% Similarity=0.165 Sum_probs=151.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
++||+|+||.||+|... ...++..+|+|+++..........++. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~-~ 67 (257)
T cd05116 1 GELGSGNFGTVKKGMYK----MKKSEKTVAVKILKNDNNDPALKDELL--------REANVMQQLDNPYIVRMIGICE-A 67 (257)
T ss_pred CcCCCcCCcceEEeEEe----cCCCceEEEEEEccCCCCcHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEc-C
Confidence 36999999999998742 124578899999875433333334444 8999999999999999999875 4
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||++ ++|.+++. ....+++..+..++.|++.||.|||++||+||||||.|||++.++ .+||+|||+++
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~ 143 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--YAKISDFGLSK 143 (257)
T ss_pred CCcEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC--eEEECCCcccc
Confidence 56799999999 58999997 345688999999999999999999999999999999999999988 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
........... .....++..|+|||.+....++...|+|+.|++. |++++
T Consensus 144 ~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~t 193 (257)
T cd05116 144 ALGADENYYKA--------KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM-WEAFS 193 (257)
T ss_pred ccCCCCCeeee--------cCCCCCCccccCHhHhccCCcCchhHHHHHHHHH-HHHHh
Confidence 53221110000 0111235689999999888899999999999776 66554
No 380
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91 E-value=2.7e-24 Score=255.91 Aligned_cols=203 Identities=16% Similarity=0.167 Sum_probs=158.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccc-ccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.++|++.+.||+|+||.||+|+.... .....++..+|+|.+... ........+. +|+.+++.+ +||||+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~i~ 84 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLV--------SEMEMMKMIGKHKNII 84 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHH--------HHHHHHHhhccCCCch
Confidence 56899999999999999999974221 111234678999998653 2223333444 899999999 899999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 245 (1620)
++++++.....+|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997421 2346777888999999999999999999999999
Q ss_pred CCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 246 P~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
|+|||++.++ .+||+|||+++.......... ...-.++..|+|||++.+..|+.++|+|+.|.+. |++
T Consensus 165 p~Nili~~~~--~~kl~D~g~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el 232 (304)
T cd05101 165 ARNVLVTENN--VMKIADFGLARDVNNIDYYKK---------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM-WEI 232 (304)
T ss_pred cceEEEcCCC--cEEECCCccceeccccccccc---------ccCCCCCceeeCchhhccCCCCchhhHHHHHHHH-HHH
Confidence 9999999988 899999999985432111000 0011135679999999988999999999999765 444
Q ss_pred H
Q 000355 326 L 326 (1620)
Q Consensus 326 L 326 (1620)
+
T Consensus 233 ~ 233 (304)
T cd05101 233 F 233 (304)
T ss_pred H
Confidence 3
No 381
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.91 E-value=5.3e-24 Score=250.52 Aligned_cols=199 Identities=17% Similarity=0.142 Sum_probs=155.2
Q ss_pred CCe-eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y-~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++| ++++.||+|+||+||++.... ....++..+|+|.+.... .......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDP--ANDGTGEMVAVKTLKREC-GQQNTSGWK--------KEINILKTLYHENIVKY 71 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEcc--ccCCCCceEEEEEecccc-ChHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 455 889999999999999876422 123567889999987542 222233444 89999999999999999
Q ss_pred eeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++... ..+++||||+++ +|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~ 146 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LV 146 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC--cE
Confidence 9988754 468999999995 99999873 3589999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+|||+++........... .....++..|+|||.+.+..++.++|+|+.|.+. |+.++
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l-~el~t 205 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRV--------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTL-YELLT 205 (283)
T ss_pred EEeecccccccCCcchhhcc--------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHH-HHHHh
Confidence 99999999854321110000 0112245679999999888899999999999665 44443
No 382
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.91 E-value=5.6e-24 Score=247.68 Aligned_cols=196 Identities=15% Similarity=0.116 Sum_probs=155.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh---hhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG---QESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~---~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
.+|++.+.||+|+||.||++.+. .++..||+|.+....... .....+. +|+.+++.++||||+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~ 67 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA------DTGRELAVKQVQFDPESPETSKEVNALE--------CEIQLLKNLLHERIV 67 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc------CCCcEEEEEEeecCcCCcccHHHHHHHH--------HHHHHHHhcCCCCee
Confidence 57899999999999999999862 457899999886432221 1122233 899999999999999
Q ss_pred ceeeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 181 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 181 ~l~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
++++++.+. ..+++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~-- 143 (265)
T cd06652 68 QYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG-- 143 (265)
T ss_pred eEEeEeccCCCceEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--
Confidence 999998764 478899999985 99999873 35578889999999999999999999999999999999999998
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
.+||+|||+++.......... . .....++..|+|||++.+..++.++|+|+.|++. |+.+
T Consensus 144 ~~~l~Dfg~~~~~~~~~~~~~-~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~el~ 203 (265)
T cd06652 144 NVKLGDFGASKRLQTICLSGT-G-------MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV-VEML 203 (265)
T ss_pred CEEECcCcccccccccccccc-c-------cccCCCCccccChhhhcCCCCCcchhHHHHHHHH-HHHh
Confidence 899999999985322110000 0 1112367889999999888899999999999765 4444
No 383
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.91 E-value=6.2e-24 Score=247.45 Aligned_cols=195 Identities=15% Similarity=0.163 Sum_probs=157.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|+.... ..+...+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLP---GKKEIDVAIKTLKAGS-SDKQRLDFL--------TEASIMGQFDHPNIIRL 70 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccC---CCCcceEEEEEcCCCC-ChHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35789999999999999999986332 1345689999986532 223334454 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+..++||||+++ +|.+++... .+.++...+..++.|++.||.|||+++|+||||||+|||+++++ .+||
T Consensus 71 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~--~~~l 147 (266)
T cd05033 71 EGVVTKSRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (266)
T ss_pred eEEEecCCceEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--CEEE
Confidence 9999999999999999985 999999743 34688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
+|||+++......... . .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 ~dfg~~~~~~~~~~~~---~------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l 198 (266)
T cd05033 148 SDFGLSRRLEDSEATY---T------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM 198 (266)
T ss_pred Cccchhhcccccccce---e------ccCCCCCccccChhhhccCCCccccchHHHHHHH
Confidence 9999999543111100 0 0011235679999999988999999999999775
No 384
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.91 E-value=5e-24 Score=248.09 Aligned_cols=195 Identities=19% Similarity=0.179 Sum_probs=158.2
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|++. .+++.+|||.+........ ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL------LDRKPVALKKVQIFEMMDAKARQDCV--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe------CCCCEEEEEEeeccccCCHHHHHHHH--------HHHHHHHhCCCcceeee
Confidence 57999999999999999999862 3578999998865332222 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++...+..++||||+++ +|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~--~~ 145 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999888642 234578999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|+|||+++........ .....+++.|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 146 ~l~d~g~~~~~~~~~~~-----------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l-~el~ 200 (267)
T cd08228 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMA 200 (267)
T ss_pred EECccccceeccchhHH-----------HhcCCCCccccChhhhccCCCCchhhHHHHHHHH-HHHh
Confidence 99999998853211100 0112367789999999888899999999999665 4444
No 385
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.91 E-value=3.9e-24 Score=259.22 Aligned_cols=202 Identities=17% Similarity=0.154 Sum_probs=156.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+.- .....+++.||||.++.... ......+. +|+.+|..+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-HSEHRALM--------SELKILIHIGHHLNVVN 75 (343)
T ss_pred hhHhcccccccCCccceEEEEeecc-CCccccceeEEEEEeccCCC-hHHHHHHH--------HHHHHHHhccCCccHhh
Confidence 4589999999999999999998521 12235678999999975432 22233344 899999999 6899999
Q ss_pred eeeEEEeC-CEEEEEEeCCC-CCHHHHHhhCC------------------------------------------------
Q 000355 182 VLGLLKTS-GLITSVIPKTP-YTLENILQFSP------------------------------------------------ 211 (1620)
Q Consensus 182 l~~~~~~~-~~~~lV~E~~~-g~L~~~l~~~~------------------------------------------------ 211 (1620)
+++++... ..+++||||++ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 99988654 46899999999 59999986421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcccCCCCC
Q 000355 212 -----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 274 (1620)
Q Consensus 212 -----------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~ 274 (1620)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCc
Confidence 12356677788999999999999999999999999999999988 89999999998532111
Q ss_pred cccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 275 WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
... ......++..|+|||++.+..++.++|+|+.|.+. |+++
T Consensus 234 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~ 275 (343)
T cd05103 234 DYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL-WEIF 275 (343)
T ss_pred chh---------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHH-HHHH
Confidence 100 01123356679999999988999999999999775 4444
No 386
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.91 E-value=3.4e-24 Score=248.25 Aligned_cols=191 Identities=19% Similarity=0.228 Sum_probs=154.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||++.+ ..+..+|+|.+...... ..++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~-------~~~~~~~iK~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKW-------RGKIDVAIKMIREGAMS---EDDFI--------EEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEe-------cCCccEEEEEeccCCCC---HHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 4688899999999999999985 23467899998653322 22344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+..|+||||++| +|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN--VVKVS 142 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC--cEEEC
Confidence 999999999999999985 999999743 34678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+. |+.+
T Consensus 143 dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il-~~l~ 195 (256)
T cd05059 143 DFGLARYVLDDQYTS----------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLM-WEVF 195 (256)
T ss_pred Ccccceecccccccc----------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHH-HHHh
Confidence 999998532111000 0011134469999999999999999999999765 4443
No 387
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.91 E-value=4e-24 Score=249.46 Aligned_cols=193 Identities=20% Similarity=0.121 Sum_probs=147.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||+||+|.... ......+|+|.+... ........++ +|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~G~fg~v~~~~~~~----~~~~~~~~~k~~~~~-~~~~~~~~~~--------~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHR----GMSKARVVVKELRAS-ATPDEQLLFL--------QEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred CcCCccCCceEEEEEEec----CCCCeEEEEeecCcc-CChHHHHHHH--------HHHHHHHhCCCCCcceEEEEECCC
Confidence 469999999999987411 134567899987643 2233334444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 190 GLITSVIPKTP-YTLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~---~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
+.+|+||||++ |+|.+++..... ...++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~dfg 145 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL--SVKIGDYG 145 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC--cEEEeccc
Confidence 99999999998 599999975322 2345677888999999999999999999999999999999998 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhccc-------ccccccccccccccccchHHHHh
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-------SMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-------~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+++.......... .....++..|+|||++. ...++.++|+|+.|++. |+++.
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~~ 204 (269)
T cd05042 146 LALEQYPEDYYIT---------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM-WELFT 204 (269)
T ss_pred cccccccchheec---------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHH-HHHHh
Confidence 9874221110000 01122456799999864 34567899999999776 55443
No 388
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.91 E-value=4.4e-24 Score=248.46 Aligned_cols=193 Identities=16% Similarity=0.135 Sum_probs=155.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.++||+|+||.||+|.+ .+...+|+|.+...... ..++. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-------~~~~~valK~~~~~~~~---~~~~~--------~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEe-------cCCceEEEEecccCccC---HHHHH--------HHHHHHHhCCCCCcceE
Confidence 45799999999999999999986 23346999998753332 22344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||+++|+||||||+||+++.++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~--~~~L 143 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 143 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC--cEEe
Confidence 99875 4568999999994 999999854445678889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... .....++..|+|||+..+..++..+|+|+.|++. |+.++
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l-~ellt 198 (262)
T cd05071 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELTT 198 (262)
T ss_pred ccCCceeecccccccc----------ccCCcccceecCHhHhccCCCCchhhHHHHHHHH-HHHHc
Confidence 9999997432111000 1122356679999999888999999999999776 44443
No 389
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91 E-value=5.8e-24 Score=253.51 Aligned_cols=204 Identities=16% Similarity=0.146 Sum_probs=158.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccc-cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.++|.+.+.||+|+||.||+|.+.... ....++..+|+|.+.... ......++. +|+++++.+ +||||+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 87 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHH--------HHHHHHHHhcCCCCEe
Confidence 368999999999999999999852211 111345689999987642 223333444 899999999 799999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 245 (1620)
++++++...+..|+||||++ |+|.+++.... ...++...+..++.|++.||+|||++||+|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 99999999999999999998 59999997532 1347788899999999999999999999999999
Q ss_pred CCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 246 P~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
|+|||++.++ .+||+|||+++......... .. ....++..|||||++.+..++.++|+|+.|++. |++
T Consensus 168 p~Nill~~~~--~~kL~dfg~a~~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l-~el 235 (307)
T cd05098 168 ARNVLVTEDN--VMKIADFGLARDIHHIDYYK---KT------TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL-WEI 235 (307)
T ss_pred HHheEEcCCC--cEEECCCcccccccccchhh---cc------ccCCCccceeChHHhccCCCCcHHHHHHHHHHH-HHH
Confidence 9999999998 89999999998432111000 00 001134579999999988899999999999776 554
Q ss_pred Hh
Q 000355 326 LL 327 (1620)
Q Consensus 326 L~ 327 (1620)
++
T Consensus 236 ~~ 237 (307)
T cd05098 236 FT 237 (307)
T ss_pred Hc
Confidence 43
No 390
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.91 E-value=8.4e-24 Score=250.03 Aligned_cols=202 Identities=14% Similarity=0.109 Sum_probs=159.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|.+.+.||+|+||.||+|.+... ....++..+++|.+.... ....+.+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNL-SPTKDKMLVAVKALKDPT--LAARKDFQ--------REAELLTNLQHEHIVKF 72 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeecc-CCCCcceeeEEEecCCcc--HHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 34689999999999999999985221 112456778999986422 22223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++...+..++||||++ ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 152 (291)
T cd05094 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 152 (291)
T ss_pred EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence 999999999999999998 59999997421 234788899999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|||++.++ .+||+|||+++......... ....+.++..|+|||.+.+..++.++|+|+.|++. |++++
T Consensus 153 Nil~~~~~--~~~l~dfg~a~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~t 220 (291)
T cd05094 153 NCLVGANL--LVKIGDFGMSRDVYSTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL-WEIFT 220 (291)
T ss_pred eEEEccCC--cEEECCCCcccccCCCceee---------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHH-HHHHh
Confidence 99999998 89999999998432211100 01223356789999999999999999999999766 55444
No 391
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.91 E-value=5.1e-24 Score=247.06 Aligned_cols=192 Identities=17% Similarity=0.178 Sum_probs=155.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.. ..+..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMKLSHEKLVQL 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEe-------cCCCcEEEEEcCCCccc---HHHHH--------HHHHHHhcCCCCCeeeE
Confidence 35799999999999999999875 23456999998754322 23344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+++||||+. ++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 141 (256)
T cd05113 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG--CVKV 141 (256)
T ss_pred EEEEccCCCcEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--CEEE
Confidence 999999999999999998 5999999743 33688999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 142 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l-~~l~ 195 (256)
T cd05113 142 SDFGLSRYVLDDEYTS----------SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM-WEVY 195 (256)
T ss_pred CCCccceecCCCceee----------cCCCccChhhCCHHHHhcCcccchhHHHHHHHHH-HHHh
Confidence 9999988532211000 0112245679999999888899999999999765 4443
No 392
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.91 E-value=4.7e-24 Score=247.62 Aligned_cols=193 Identities=17% Similarity=0.151 Sum_probs=156.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.+....... ..+. +|+.++++++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~~k~~~~~~~~~---~~~~--------~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTW-------NGNTKVAVKTLKPGTMSP---ESFL--------EEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEe-------cCCceeEEEEecCCCCCH---HHHH--------HHHHHHHhcCCCceEEE
Confidence 46899999999999999999985 345679999987644332 2344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~--~~~l 143 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL--VCKI 143 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc--eEEe
Confidence 99875 4568999999985 999999854455688999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ...+.++..|+|||++.+..++.++|.|+.|.+. |+++.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~l~~ 198 (260)
T cd05070 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELVT 198 (260)
T ss_pred CCceeeeeccCccccc----------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHH-HHHHh
Confidence 9999998432111000 0112234569999999888899999999999776 55554
No 393
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.91 E-value=7e-24 Score=248.25 Aligned_cols=202 Identities=16% Similarity=0.110 Sum_probs=158.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.... ....+..+|+|.+.... .......+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVV-KGEPETRVAIKTVNENA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccC-CCCcceeEEEEecCCcc-CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 468999999999999999999863211 12346789999986542 222333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
++++......++||||++ ++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 999999999999999998 59999997421 223577788899999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
++ .+||+|||+++......... .. ....++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 155 ~~--~~kl~dfg~~~~~~~~~~~~-~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 215 (277)
T cd05032 155 DL--TVKIGDFGMTRDIYETDYYR-KG--------GKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL-WEMA 215 (277)
T ss_pred CC--CEEECCcccchhhccCcccc-cC--------CCCCccccccCHHHHhcCCCCcccchHHHHHHH-HHhh
Confidence 99 89999999998432211100 00 111246679999999888899999999999776 5544
No 394
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.91 E-value=5.9e-24 Score=245.46 Aligned_cols=190 Identities=16% Similarity=0.121 Sum_probs=151.3
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|++. .+++.+|+|.+... ........+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR------ADNTPVAVKSCRET-LPPDLKAKFL--------QEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEe------cCCceEEEEecCcc-CCHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEcCC
Confidence 47999999999999862 45788999987643 2222333444 899999999999999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+.+++||||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~ 142 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN--VLKISDFGMSR 142 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC--cEEECccccCc
Confidence 999999999985 99999973 234578999999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
......... .. ..-..+..|+|||.+.+..++.++|+|+.|+|. |+.++
T Consensus 143 ~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~e~~~ 191 (252)
T cd05084 143 EEEDGVYAS---TG------GMKQIPVKWTAPEALNYGRYSSESDVWSFGILL-WEAFS 191 (252)
T ss_pred ccccccccc---cC------CCCCCceeecCchhhcCCCCChHHHHHHHHHHH-HHHHh
Confidence 432110000 00 000123469999999988899999999999876 55443
No 395
>PTZ00421 coronin; Provisional
Probab=99.91 E-value=4.9e-22 Score=248.00 Aligned_cols=226 Identities=19% Similarity=0.225 Sum_probs=172.6
Q ss_pred EEEEcCCCCEEEEeCCCc-ee-------------EEeecccCcEEEEEEcc-CCCEEEEeccCCCCCcEEEEEeCCCC--
Q 000355 1243 LGRVGGLKDESPWKIKAS-IL-------------SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRI-- 1305 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~g~-~l-------------~tl~gH~~~V~svafsp-dg~~LaSgs~d~~~DgtVrLWdl~tg-- 1305 (1620)
+++++.+..+..|+..|. .+ ..+.||.+.|++++|+| ++++|+|||. |++|++||+.++
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~----DgtIkIWdi~~~~~ 110 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE----DGTIMGWGIPEEGL 110 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----CCEEEEEecCCCcc
Confidence 677777777777876532 11 24789999999999999 8899999997 999999999765
Q ss_pred -----eEEEEEecCCcceeEEEEeeCC-CeEE--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccc
Q 000355 1306 -----NCVSGYYGHEEVVNDICVLSSS-GRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1377 (1620)
Q Consensus 1306 -----~~l~~l~gH~~~V~sV~f~~~~-~~la--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~ 1377 (1620)
+++..+.+|...|.+|+|+|++ ..++ +.|++|+|||+.+++.+..+..|.
T Consensus 111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~---------------------- 168 (493)
T PTZ00421 111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHS---------------------- 168 (493)
T ss_pred ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCC----------------------
Confidence 3577899999999999999976 4564 459999999999998877776442
Q ss_pred cccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCcc
Q 000355 1378 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1378 ~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1457 (1620)
..+.+++|+++|..+++|+.|++|++||+++++.+..+.+|... .+..+.|.
T Consensus 169 ------------------~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~-----~~~~~~w~----- 220 (493)
T PTZ00421 169 ------------------DQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA-----KSQRCLWA----- 220 (493)
T ss_pred ------------------CceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC-----cceEEEEc-----
Confidence 23677778888999999999999999999999999888876542 12233343
Q ss_pred ccCcccCCCCEEEE-E---ecCCcEEEEECCCCc-EEEEEEccC-CcEEEEE-eCCCCEEEEEe-CCCcEEEEECCCCC
Q 000355 1458 QAGGAVASPSWIAA-G---LSSGQCRLFDVRSGN-VIASWRAHD-GYVTKLA-APEDHLLVSSS-LDKTLRIWDLRRNW 1528 (1620)
Q Consensus 1458 ~~~g~~p~g~~Las-G---s~Dg~I~lwD~~tg~-~i~~l~gH~-~~V~sva-spdg~~LaSgS-~DgtI~IWDl~~~~ 1528 (1620)
+++..+++ | +.|+.|++||+++.. ++.....+. ..+.... ++++++|++|+ .|++|++||+.++.
T Consensus 221 ------~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 221 ------KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred ------CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 33345554 4 347999999999764 444444333 3344444 78999988887 59999999999873
No 396
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.91 E-value=3.2e-24 Score=248.88 Aligned_cols=193 Identities=13% Similarity=0.121 Sum_probs=159.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|.+ ..+..+|+|.+..... ....++. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~-------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLW-------KNRVRVAIKILKSDDL--LKQQDFQ--------KEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEe-------cCCCcEEEEeccccch--hhHHHHH--------HHHHHHhcCCCcchhhe
Confidence 45799999999999999999986 3368899999865322 1223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+..++||||+++ +|.+++.......++...++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~--~~kl 145 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL--VCKV 145 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc--eEEE
Confidence 9999999999999999985 999999865556789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++......... .....++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 146 ~d~g~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l-~~l~ 198 (261)
T cd05148 146 ADFGLARLIKEDVYL-----------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL-YEMF 198 (261)
T ss_pred ccccchhhcCCcccc-----------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHH-HHHH
Confidence 999999853211100 1122246679999999888999999999999765 4444
No 397
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.91 E-value=6.7e-24 Score=252.61 Aligned_cols=197 Identities=17% Similarity=0.163 Sum_probs=154.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++|++.+.||+|+||.||+|.+... .....+|+|.+... ........+. +|++++.++ +||||++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~----~~~~~~~ik~~~~~-~~~~~~~~~~--------~Ei~~l~~l~~h~~iv~ 72 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIIN 72 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccC----CceeeEEEEEeccc-CCHHHHHHHH--------HHHHHHHHhcCCCCcce
Confidence 46899999999999999999986221 11234677776542 2222333444 899999999 8999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
+++++..++.+|+||||++ ++|.++++... ...+++..++.++.||+.||+|||++||+||||||
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp 152 (303)
T cd05088 73 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 152 (303)
T ss_pred EEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 9999999999999999998 59999997422 23578889999999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++...... .. .....+..|+|||++.+..++.+.|+|+.|++. |+.+
T Consensus 153 ~Nili~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~ell 217 (303)
T cd05088 153 RNILVGENY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIV 217 (303)
T ss_pred heEEecCCC--cEEeCccccCcccchhh------hc------ccCCCcccccCHHHHhccCCcccccchhhhhHH-HHHH
Confidence 999999998 89999999987321100 00 011134569999999888899999999999876 6655
Q ss_pred h
Q 000355 327 L 327 (1620)
Q Consensus 327 ~ 327 (1620)
+
T Consensus 218 t 218 (303)
T cd05088 218 S 218 (303)
T ss_pred h
Confidence 4
No 398
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.91 E-value=6e-24 Score=261.92 Aligned_cols=203 Identities=17% Similarity=0.144 Sum_probs=157.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCC-cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~-HpNIv~ 181 (1620)
.++|.+.+.||+|+||.||+|++.-. .....+..||+|+++.... ......+. +|+++|..+. |||||+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGL-SHSQSTMKVAVKMLKSTAR-SSEKQALM--------SELKIMSHLGPHLNIVN 105 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCC-CCCCCceEEEEEecCCCCC-hhHHHHHH--------HHHHHHHhcCCCCCeEE
Confidence 45788999999999999999986321 1123467899999976422 22223344 8999999997 999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC------------------------------------------------
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPN------------------------------------------------ 212 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~------------------------------------------------ 212 (1620)
+++++...+.+++||||++ |+|.++++....
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 9999999999999999999 599999974321
Q ss_pred ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000355 213 ------------------------------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 244 (1620)
Q Consensus 213 ------------------------------------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 244 (1620)
..++...+..|+.||+.||.|||+++|+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 23566778889999999999999999999999
Q ss_pred CCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHH
Q 000355 245 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 324 (1620)
Q Consensus 245 KP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfe 324 (1620)
||+|||++.++ .+||+|||+++.......... .....++..|||||.+.+..++.++|+|+.|.+. ||
T Consensus 266 kp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil-~e 333 (401)
T cd05107 266 AARNVLICEGK--LVKICDFGLARDIMRDSNYIS---------KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILL-WE 333 (401)
T ss_pred CcceEEEeCCC--EEEEEecCcceeccccccccc---------CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHH-HH
Confidence 99999999988 899999999984321111000 0111246789999999988899999999999765 55
Q ss_pred HHh
Q 000355 325 YLL 327 (1620)
Q Consensus 325 yL~ 327 (1620)
+++
T Consensus 334 ~l~ 336 (401)
T cd05107 334 IFT 336 (401)
T ss_pred HHH
Confidence 553
No 399
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.91 E-value=1.1e-23 Score=244.09 Aligned_cols=195 Identities=17% Similarity=0.183 Sum_probs=159.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+. .++..+++|.+...... ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDI------ATGELVAIKVIKLEPGD--DFEIIQ--------QEISMLKECRHPNIVAY 65 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEec------CCCCEEEEEEEEcCchh--hHHHHH--------HHHHHHHhCCCCChhce
Confidence 468999999999999999999862 34678999998754222 223333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++...+.+|++|||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l 142 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKL 142 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEE
Confidence 9999999999999999995 99998874 235789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccc---ccccccccccccccchHHHHhh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~---~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
+|||++........ ......++..|+|||++.+. .++.++|.|+.|++. |+++++
T Consensus 143 ~d~g~~~~~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l-~~~~tg 200 (262)
T cd06613 143 ADFGVSAQLTATIA-----------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA-IELAEL 200 (262)
T ss_pred Cccccchhhhhhhh-----------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH-HHHHhC
Confidence 99999874321110 01122367789999998877 889999999999776 555543
No 400
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.91 E-value=6.8e-24 Score=247.69 Aligned_cols=197 Identities=16% Similarity=0.145 Sum_probs=151.7
Q ss_pred eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
.+.+.||+|+||.||+|.+... .....+|+|.++...........+. +|+++++.++||||+++++++
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~ 69 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQD----DSILKVAVKTMKIAICTRSEMEDFL--------SEAVCMKEFDHPNVMRLIGVC 69 (272)
T ss_pred ccccccCcccCceEEEeEEccC----CCeeeEEEEecccCcCCHHHHHHHH--------HHHHHHHhCCCCCcceEEEEE
Confidence 4678999999999999986221 1224689999876544444444555 899999999999999999987
Q ss_pred EeC------CEEEEEEeCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC
Q 000355 187 KTS------GLITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 255 (1620)
Q Consensus 187 ~~~------~~~~lV~E~~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~ 255 (1620)
... ...++||||++ |+|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 70 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 149 (272)
T cd05075 70 LQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM 149 (272)
T ss_pred ccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC
Confidence 432 25789999998 5999888532 223478899999999999999999999999999999999999988
Q ss_pred ceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 256 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 256 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
.+||+|||+++........ .. .....+++.|+|||...+..++.++|+|+.|++. |++++
T Consensus 150 --~~kl~Dfg~~~~~~~~~~~------~~---~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il-~el~~ 209 (272)
T cd05075 150 --NVCVADFGLSKKIYNGDYY------RQ---GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTM-WEIAT 209 (272)
T ss_pred --CEEECCCCcccccCcccce------ec---CCcccCCcccCCHHHccCCCcChHHHHHHHHHHH-HHHHc
Confidence 8999999999854221100 00 0111245679999999999999999999999776 54443
No 401
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.91 E-value=7.6e-24 Score=245.69 Aligned_cols=194 Identities=17% Similarity=0.140 Sum_probs=158.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~-------~~~~~~~vK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTW-------NGTTKVAVKTLKPGTMS---PEAFL--------QEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEE-------cCCceEEEEEecCCccC---HHHHH--------HHHHHHhhCCCCCEeee
Confidence 56899999999999999999885 34577999998764332 23344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++......++||||+++ +|.+++.......++...++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~--~~~l 144 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL--VCKI 144 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC--CEEE
Confidence 9999998999999999985 999999854445789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......+..|+|||.+.+..++.++|+|+.|.+. |+.+.
T Consensus 145 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il-~~l~t 199 (261)
T cd05034 145 ADFGLARLIEDDEYTA----------REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL-TEIVT 199 (261)
T ss_pred Cccccceeccchhhhh----------hhccCCCccccCHHHhccCCcCchhHHHHHHHHH-HHHHh
Confidence 9999998542110000 0011134579999999988899999999999775 55443
No 402
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1e-24 Score=247.64 Aligned_cols=214 Identities=16% Similarity=0.201 Sum_probs=166.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHH-HHHHhcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESK-NFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~-~~~~~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
.++|-++..||+|+|++||+|-+ +...+.||+|+-..++.-..+.+ ++. ..++||..|.+.|+||-||+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFD------l~EqRYvAvKIHqlNK~WrdEKKeNYh----KHAcREyrIHKeLDHpRIVK 531 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFD------LTEQRYVAVKIHQLNKNWRDEKKENYH----KHACREYRIHKELDHPRIVK 531 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcc------cchhheeeEeeehhccchhhHhhhhHH----HHHHHHHhhhhccCcceeee
Confidence 35899999999999999999886 35678899998766655443333 233 24679999999999999999
Q ss_pred eeeEEEeC-CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCCCCceEecCC-Cc
Q 000355 182 VLGLLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--LGIAHRSVCPSNVLLTDS-CW 256 (1620)
Q Consensus 182 l~~~~~~~-~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~--~gIiHRDLKP~NILl~~~-~~ 256 (1620)
+|++|.-+ +.+|-|+|||+| ||.-+++ ..+.+++.+++.|+-||+.||.||.+ -.|||-||||.|||+... .+
T Consensus 532 lYDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 532 LYDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred eeeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 99999754 579999999998 8888888 57789999999999999999999998 469999999999998543 23
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc----ccccccccccccccccchHHHHhhhhcc
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~----~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
+.+||+|||+++.+.+.......+..- .....||-+|.+||.+. ....+.++|+|+.|.|. |.+|-+..+|
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGmeL----TSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF-yQClYGrKPF 684 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGMEL----TSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF-YQCLYGRKPF 684 (775)
T ss_pred ceeEeeecchhhhccCCccCcccceee----ecccCceeeecCcceeecCCCCCccccceeeEeeehhh-hhhhccCCCC
Confidence 589999999999766544322211111 12234899999999654 23467799999999887 6666555554
Q ss_pred c
Q 000355 333 A 333 (1620)
Q Consensus 333 ~ 333 (1620)
+
T Consensus 685 G 685 (775)
T KOG1151|consen 685 G 685 (775)
T ss_pred C
Confidence 3
No 403
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=7.7e-23 Score=224.94 Aligned_cols=240 Identities=16% Similarity=0.220 Sum_probs=201.0
Q ss_pred cccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCC--EEEEeccCCCCCc
Q 000355 1219 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKG 1295 (1620)
Q Consensus 1219 ~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~--~LaSgs~d~~~Dg 1295 (1620)
-.+..|.+.+.++..+|.| +||||.|.+|+|||+. ...+..+-.|.+.|+++.|.++-. .|+||+. ||
T Consensus 37 F~~~aH~~sitavAVs~~~-----~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG 107 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVSGPY-----VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DG 107 (362)
T ss_pred ccccccccceeEEEeccee-----EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CC
Confidence 3466799999998888998 9999999999999998 667888889999999999999875 8999998 89
Q ss_pred EEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccc
Q 000355 1296 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1373 (1620)
Q Consensus 1296 tVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1373 (1620)
.|.+|++...+++.++++|.+.|+.|+.+|.+... +++|+.++.||+-+|+.-..+.-.
T Consensus 108 ~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~------------------- 168 (362)
T KOG0294|consen 108 HIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK------------------- 168 (362)
T ss_pred cEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC-------------------
Confidence 99999999999999999999999999999998876 667999999999998864444321
Q ss_pred cccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeC
Q 000355 1374 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1453 (1620)
Q Consensus 1374 ~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~ 1453 (1620)
+.-+.+.|+|.|.+++.++.++ |-+|.+.+......+. .+..+.|+.|
T Consensus 169 ----------------------~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~-------~~~r~l~~~~-- 216 (362)
T KOG0294|consen 169 ----------------------NKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIE-------NPKRILCATF-- 216 (362)
T ss_pred ----------------------CcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhh-------ccccceeeee--
Confidence 0123466777899999888754 8899888766554433 2223444443
Q ss_pred CCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE---eCCCCEEEEEeCCCcEEEEECCCCC
Q 000355 1454 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRRNW 1528 (1620)
Q Consensus 1454 ~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~~~ 1528 (1620)
-++..+++|.+|+.|++||..++.+...+.+|...|-++. .|++.+|+|+|.||.|++||++...
T Consensus 217 ----------l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 217 ----------LDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred ----------cCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence 3557899999999999999999999999999999999998 6778899999999999999998763
No 404
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.90 E-value=1.4e-23 Score=244.93 Aligned_cols=202 Identities=15% Similarity=0.215 Sum_probs=158.8
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|...... ..+..||+|.+... .......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~---~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 70 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPG---KREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNIIHL 70 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCC---CCceeEEEEEcCCC-CCHHHHHHHH--------HHHHHHHhCCCcCcceE
Confidence 346899999999999999999863321 23457999998653 2333344555 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..++..++||||+++ +|.+++.. ..+.++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--~~kl 147 (269)
T cd05065 71 EGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (269)
T ss_pred EEEECCCCceEEEEecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--cEEE
Confidence 9999999999999999985 99999874 345678999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++........ ... .....+..+..|+|||.+.+..++.++|+|+.|++. |+++
T Consensus 148 ~dfg~~~~~~~~~~~-----~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l-~e~l 205 (269)
T cd05065 148 SDFGLSRFLEDDTSD-----PTY-TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM-WEVM 205 (269)
T ss_pred CCCccccccccCccc-----ccc-ccccCCCcceeecCHhHhccCcccchhhhhhhHHHH-HHHh
Confidence 999998743221110 000 000111123569999999999999999999999776 5544
No 405
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.90 E-value=1.1e-23 Score=248.09 Aligned_cols=199 Identities=16% Similarity=0.091 Sum_probs=157.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
-|++++.||+|+||.||+|+.... ...++..+|+|.++... .......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 73 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPE--GDNTGEQVAVKSLKPES-GGNHIADLK--------KEIEILRNLYHENIVKYKG 73 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccC--CCCccceEEEEEcCccc-cHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 478899999999999999975321 12467899999986532 222233344 8999999999999999999
Q ss_pred EEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 185 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 185 ~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++... ...++||||++| +|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~--~~~l 150 (284)
T cd05079 74 ICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKI 150 (284)
T ss_pred EEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC--CEEE
Confidence 98875 578999999985 999999742 33578889999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++......... .......++..|+|||++.+..++.++|+|+.|.+. |+.+
T Consensus 151 ~dfg~~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~ell 206 (284)
T cd05079 151 GDFGLTKAIETDKEYY--------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL-YELL 206 (284)
T ss_pred CCCccccccccCccce--------eecCCCCCCccccCHHHhccCCCCccccchhhhhhh-hhhh
Confidence 9999998543211100 011223467789999999888899999999999776 5444
No 406
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.90 E-value=9.4e-24 Score=245.07 Aligned_cols=193 Identities=15% Similarity=0.152 Sum_probs=157.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+++++||+|+||.||+|.. .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSLKQGSMS---PEAFL--------AEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-------CCCceEEEEEecCCCCc---HHHHH--------HHHHHHHhcCCcCeeeE
Confidence 46899999999999999999985 45678999998764432 23444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+. ++|.+++.......++...+..++.|++.||+|||++||+||||||+||+++.++ .++|
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL--CCKI 143 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC--CEEE
Confidence 99874 567899999998 5999999865556788999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++........ ......++..|+|||++....++..+|+|+.|.+. |+.++
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l-~el~~ 198 (260)
T cd05067 144 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL-TEIVT 198 (260)
T ss_pred ccCcceeecCCCCcc----------cccCCcccccccCHHHhccCCcCcccchHHHHHHH-HHHHh
Confidence 999999743211100 01122245679999999988899999999999665 44443
No 407
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.90 E-value=1.2e-23 Score=247.50 Aligned_cols=201 Identities=16% Similarity=0.139 Sum_probs=156.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++++.||+|+||.||+|...-. ...++..||+|.+... .......+. +|+++++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~~v~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 70 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPL--QDNTGEVVAVKKLQHS--TAEHLRDFE--------REIEILKSLQHDNIVKY 70 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCC--cCCCCcEEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCCeeEE
Confidence 34789999999999999999874211 1246789999998653 222333444 89999999999999999
Q ss_pred eeEEEeC--CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTS--GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~--~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++... ..+++||||++ ++|.+++... ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~--~~ 147 (284)
T cd05081 71 KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RV 147 (284)
T ss_pred EEEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC--eE
Confidence 9987543 47899999998 5999999742 34578899999999999999999999999999999999999998 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+|||+++........... .....++..|+|||++.+..++.++|+|+.|.+. |+++.
T Consensus 148 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~~ 206 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYKV--------REPGESPIFWYAPESLTESKFSVASDVWSFGVVL-YELFT 206 (284)
T ss_pred EECCCcccccccCCCcceee--------cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH-HHHhh
Confidence 99999999854321110000 0011134469999999988999999999999765 55443
No 408
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.90 E-value=1.2e-23 Score=249.48 Aligned_cols=195 Identities=18% Similarity=0.165 Sum_probs=152.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|..... .....+++|.++.. ........+. +|++++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~----~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKD----GLKMNAAIKMLKEF-ASENDHRDFA--------GELEVLCKLGHHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCC----CCcceeEEEEcccc-CCHHHHHHHH--------HHHHHHHhhcCCCchhhe
Confidence 5789999999999999999986221 11234788887642 2222333444 899999999 79999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 247 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 247 (1620)
++++...+.+|+||||++ ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~ 148 (297)
T cd05089 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR 148 (297)
T ss_pred EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence 999999999999999998 59999997421 134788899999999999999999999999999999
Q ss_pred ceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 248 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 248 NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||++.++ .+||+|||+++....... . .....+..|+|||++.+..++.++|+|+.|++. |+++
T Consensus 149 Nill~~~~--~~kl~dfg~~~~~~~~~~------~------~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il-~el~ 212 (297)
T cd05089 149 NVLVGENL--ASKIADFGLSRGEEVYVK------K------TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL-WEIV 212 (297)
T ss_pred eEEECCCC--eEEECCcCCCccccceec------c------CCCCcCccccCchhhccCCCCchhhHHHHHHHH-HHHH
Confidence 99999988 899999999873211100 0 001123469999999988999999999999776 5544
No 409
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.4e-21 Score=216.65 Aligned_cols=275 Identities=13% Similarity=0.127 Sum_probs=217.3
Q ss_pred CCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEe
Q 000355 1225 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWE 1301 (1620)
Q Consensus 1225 ~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWd 1301 (1620)
.+.|.+ |+.+|.. +++++.|.+++|||.. |..++++..+...|..++|......++.+|. ..|.+||.-+
T Consensus 14 ~~~i~sl~fs~~G~~-----litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLs 86 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLL-----LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLS 86 (311)
T ss_pred CCceeEEEecCCCCE-----EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEE
Confidence 345665 8888886 9999999999999987 9999999999999999999888777777775 4689999999
Q ss_pred CCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccc
Q 000355 1302 LTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1379 (1620)
Q Consensus 1302 l~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~ 1379 (1620)
+.+.++++.|.||.+.|++++.+|-+..+ +|.|++|++||+++.+|...+.....
T Consensus 87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~----------------------- 143 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR----------------------- 143 (311)
T ss_pred eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC-----------------------
Confidence 99999999999999999999999988777 56699999999998888766643211
Q ss_pred cccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCC--ceeEEeeCCCcccccCCccceEeeeCCCcc
Q 000355 1380 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKM 1457 (1620)
Q Consensus 1380 ~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1457 (1620)
.+.++.|.|-.+|+|...+.|++||+|.- .+..++.-... -....+.+.|+
T Consensus 144 -------------------pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~---~~~ew~~l~FS----- 196 (311)
T KOG1446|consen 144 -------------------PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDN---DEAEWTDLEFS----- 196 (311)
T ss_pred -------------------cceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCC---CccceeeeEEc-----
Confidence 23455667999999998889999999873 34444432211 12334556654
Q ss_pred ccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcE----EEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCe
Q 000355 1458 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV----TKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1533 (1620)
Q Consensus 1458 ~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V----~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1533 (1620)
++|++++.+...+.+++.|.-+|..+.++.++...- .+.-.||++++++|+.||+|.+|+++++ .++.
T Consensus 197 ------~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg--~~v~ 268 (311)
T KOG1446|consen 197 ------PDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG--KKVA 268 (311)
T ss_pred ------CCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC--cEee
Confidence 778899999999999999999999999998775432 3333899999999999999999999998 6677
Q ss_pred Eeec-CCCCEEE--EeecCCEEEEEeCCceEEEec
Q 000355 1534 VFKG-HTNGISG--FSVWGQDVISISNNKIGLSSL 1565 (1620)
Q Consensus 1534 ~l~g-H~~~V~a--fSpdg~~LaSgs~D~I~vwdl 1565 (1620)
.+++ +..++.+ |+|.--+++|++.. +.+|-.
T Consensus 269 ~~~~~~~~~~~~~~fnP~~~mf~sa~s~-l~fw~p 302 (311)
T KOG1446|consen 269 VLRGPNGGPVSCVRFNPRYAMFVSASSN-LVFWLP 302 (311)
T ss_pred EecCCCCCCccccccCCceeeeeecCce-EEEEec
Confidence 8888 6778877 66655555554422 666753
No 410
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.90 E-value=1.1e-23 Score=247.65 Aligned_cols=200 Identities=15% Similarity=0.123 Sum_probs=153.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|...... ......+++|.+... .......++. .|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~--~~~~~~~~~k~~~~~-~~~~~~~~~~--------~~~~~l~~l~h~~iv~~ 74 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEG--DSIKIPVAIKTIQDR-SGRQTFQEIT--------DHMLAMGSLDHAYIVRL 74 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCC--CceeeEEEEeecccc-cchHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 458899999999999999999862211 011235788887532 2222223333 78889999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. ....++++||++ |+|.+++.. ....+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||
T Consensus 75 ~~~~~-~~~~~~i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~--~~kl 150 (279)
T cd05111 75 LGICP-GASLQLVTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS--IVQI 150 (279)
T ss_pred EEEEC-CCccEEEEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEE
Confidence 99875 456788999998 699999974 245688999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......++..|+|||.+.+..|+.+.|+|+.|.+. |+.+.
T Consensus 151 ~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il-~el~t 206 (279)
T cd05111 151 ADFGVADLLYPDDKKY---------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV-WEMMS 206 (279)
T ss_pred cCCccceeccCCCccc---------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH-HHHHc
Confidence 9999998432111100 01123356789999999988999999999999776 55543
No 411
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=1.1e-23 Score=252.17 Aligned_cols=204 Identities=16% Similarity=0.174 Sum_probs=158.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccccc-ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG-CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
.++|++.+.||+|+||.||+|++..... .......+|+|.+.... ......++. +|+++++.+ +||||+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv 81 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLI--------SEMELMKLIGKHKNII 81 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhccCCCCee
Confidence 4689999999999999999998522111 11345679999987532 233333444 899999999 699999
Q ss_pred ceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000355 181 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 245 (1620)
Q Consensus 181 ~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 245 (1620)
++++++...+.+|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 82 NLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997422 2347888889999999999999999999999999
Q ss_pred CCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHH
Q 000355 246 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 246 P~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfey 325 (1620)
|+|||++.++ .+||+|||+++......... .. ....++..|||||++.+..++.++|+|+.|.+. |++
T Consensus 162 p~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l-~el 229 (314)
T cd05099 162 ARNVLVTEDN--VMKIADFGLARGVHDIDYYK---KT------SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILM-WEI 229 (314)
T ss_pred ceeEEEcCCC--cEEEcccccccccccccccc---cc------ccCCCCccccCHHHHccCCcCccchhhHHHHHH-HHH
Confidence 9999999998 89999999998442111000 00 001134579999999988999999999999776 555
Q ss_pred Hh
Q 000355 326 LL 327 (1620)
Q Consensus 326 L~ 327 (1620)
+.
T Consensus 230 ~~ 231 (314)
T cd05099 230 FT 231 (314)
T ss_pred Hh
Confidence 53
No 412
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.90 E-value=1.1e-23 Score=247.33 Aligned_cols=200 Identities=19% Similarity=0.183 Sum_probs=154.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++..... .....||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~--~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGE--NVKIPVAIKVLRENT-SPKANKEIL--------DEAYVMAGVGSPYVCRL 74 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCC--ccceEEEEEEecCCC-CHHHHHHHH--------HHHHHHHhcCCCCCceE
Confidence 4689999999999999999998522110 112358999986532 222233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.. ...+++|||++ |+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~-~~~~l~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~--~~kL 150 (279)
T cd05109 75 LGICLT-STVQLVTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN--HVKI 150 (279)
T ss_pred EEEEcC-CCcEEEEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--cEEE
Confidence 999875 45789999998 599999974 245689999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++.......... .....++..|||||...+..++.++|+|+.|++. |+.++
T Consensus 151 ~dfG~~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~el~t 206 (279)
T cd05109 151 TDFGLARLLDIDETEYH---------ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTV-WELMT 206 (279)
T ss_pred CCCCceeecccccceee---------cCCCccchhhCCHHHhccCCCCchhHHHHHHHHH-HHHHc
Confidence 99999985432111000 0111235679999999988999999999999765 55443
No 413
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.90 E-value=1.1e-23 Score=249.62 Aligned_cols=203 Identities=18% Similarity=0.160 Sum_probs=157.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccc----------cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhcc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC 173 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~ 173 (1620)
++|++.+.||+|+||.||++.+.-.. ....+...+|+|.+.... ......++. +|+++|+.
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~--------~E~~~l~~ 75 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFL--------KEIKIMSR 75 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHh
Confidence 57999999999999999998642110 111245679999987532 222334444 89999999
Q ss_pred CCcccccceeeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000355 174 LRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPN---------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 243 (1620)
Q Consensus 174 l~HpNIv~l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 243 (1620)
++||||+++++++...+..++||||++ ++|.+++..... ..++...+..++.||+.||+|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 999999999999999999999999998 599999874221 2366778999999999999999999999999
Q ss_pred CCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchH
Q 000355 244 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNF 323 (1620)
Q Consensus 244 LKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnf 323 (1620)
|||+|||++.++ .+||+|||+++........ . ......++..|+|||...+..++.++|+|+.|++. |
T Consensus 156 lkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~------~---~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l-~ 223 (296)
T cd05095 156 LATRNCLVGKNY--TIKIADFGMSRNLYSGDYY------R---IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL-W 223 (296)
T ss_pred CChheEEEcCCC--CEEeccCcccccccCCcce------e---ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH-H
Confidence 999999999988 8999999999843211100 0 01112235679999988888899999999999776 6
Q ss_pred HHHh
Q 000355 324 EYLL 327 (1620)
Q Consensus 324 eyL~ 327 (1620)
++++
T Consensus 224 el~~ 227 (296)
T cd05095 224 EILT 227 (296)
T ss_pred HHHH
Confidence 6554
No 414
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.90 E-value=7.5e-25 Score=262.60 Aligned_cols=190 Identities=14% Similarity=0.152 Sum_probs=155.4
Q ss_pred eeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 109 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 109 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
...||+|+|-+||+|-| ..+|..||.-.++..+... .....+. .|+++|+.|+|||||++|+++
T Consensus 45 ~evLGrGafKtVYka~D------e~~giEVAWnqvk~~d~~q~~~~leR~~--------~Ev~lLKsL~H~NIirfy~SW 110 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFD------EEEGIEVAWNQVKIRDVTQSPEELERLY--------SEVHLLKSLKHPNIIRFYDSW 110 (632)
T ss_pred hhhcccccceeeeeccc------cccchhhHHHHHhHHHhhcChHHHHHHH--------HHHHHHccCCCCceeeeeehe
Confidence 57999999999999997 2567778765554332222 2223444 899999999999999999999
Q ss_pred EeCCE--EEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCceEecCCCceEEEE
Q 000355 187 KTSGL--ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 187 ~~~~~--~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
.+..+ +.+|+|.+. |+|..+++ +.+..+...++.|++||++||.|||++ .|||||||.+||+|+.+. +.|||
T Consensus 111 ~d~~n~~in~iTEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~-G~VKI 187 (632)
T KOG0584|consen 111 VDTDNKTINFITELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL-GEVKI 187 (632)
T ss_pred ecCCCceeeeeeecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc-Cceee
Confidence 87764 889999998 79999999 466778889999999999999999996 699999999999999875 49999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
+|.|||+.... .+...|.|||.|||||+.. ..|+..+|+++.| ++.|++..+.-
T Consensus 188 GDLGLAtl~r~-------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFG-------MCmLEMvT~eY 241 (632)
T KOG0584|consen 188 GDLGLATLLRK-------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFG-------MCMLEMVTSEY 241 (632)
T ss_pred cchhHHHHhhc-------------cccceeccCccccChHHHh-hhcchhhhhhhhh-------HHHHHHHhccC
Confidence 99999984321 1223477999999999998 7899999999999 66667766643
No 415
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.90 E-value=1.7e-23 Score=243.33 Aligned_cols=196 Identities=20% Similarity=0.188 Sum_probs=160.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhh-HHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .+++.+|+|.++........ ...+. +|+++++.++|+||+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL------LDGRVVALKKVQIFEMMDAKARQDCL--------KEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc------CCCCEEEEEEeecccccchhhHHHHH--------HHHHHHHhCCCCCeeee
Confidence 57999999999999999999862 36788999998753333322 33344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++..++..++||||+++ +|.+++... ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~--~~ 145 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC--cE
Confidence 9999999999999999995 999998642 235578999999999999999999999999999999999999998 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+|||+++....... .. ..-.+++.|+|||.+.+..++.++|+|+.|.+. |+.+.
T Consensus 146 ~l~d~~~~~~~~~~~~---~~--------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~~l~~ 201 (267)
T cd08224 146 KLGDLGLGRFFSSKTT---AA--------HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAA 201 (267)
T ss_pred EEeccceeeeccCCCc---cc--------ceecCCccccCHHHhccCCCCchhcHHHHHHHH-HHHHH
Confidence 9999999874321100 00 111257789999999998999999999999776 55544
No 416
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.90 E-value=8.2e-24 Score=246.32 Aligned_cols=201 Identities=19% Similarity=0.162 Sum_probs=161.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh-hHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
++|++.+.||+|+||.||+|.+. .++..+|||.+........ ...++. +|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL------LDGVPVALKKVQIFDLMDAKARADCI--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec------CCCceEEEEeeeehhhhhHHHHHHHH--------HHHHHHHHccCCchhhh
Confidence 57889999999999999999862 4578899998865333222 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 259 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~l 259 (1620)
++++..++..++||||+++ +|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999988732 235678999999999999999999999999999999999999988 89
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcc
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 332 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 332 (1620)
||+|||+++........ .....++..|+|||.+.+..++.++|+|+.|.+. |+++....++
T Consensus 146 ~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il-~~l~~g~~p~ 206 (267)
T cd08229 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL-YEMAALQSPF 206 (267)
T ss_pred EECcchhhhccccCCcc-----------cccccCCcCccCHHHhcCCCccchhhHHHHHHHH-HHHHhCCCCc
Confidence 99999998743211100 0111267789999999988899999999999776 5555544433
No 417
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.90 E-value=1.2e-23 Score=248.59 Aligned_cols=201 Identities=17% Similarity=0.183 Sum_probs=156.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+|++.+.||+|+||.||+|.+....+ ......+|+|.+.... ......++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKG-RAGYTTVAVKMLKENA-SSSELRDLL--------SEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCC-CCcceeEEEEecCCCC-CHHHHHHHH--------HHHHHHhhCCCCCEeeEEE
Confidence 47889999999999999998632211 2334678898886532 223333444 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 241 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 241 (1620)
.+..++..++||||++ ++|.+++.... ...++...+..++.|++.||.|||++||+|
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 9999999999999999 59999986421 134678888999999999999999999999
Q ss_pred cCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 242 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 242 RDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||||+|||+++++ .+||+|||+++.......... .....++..|+|||.+.+..++..+|+|+.|.+.
T Consensus 151 ~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 219 (290)
T cd05045 151 RDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVK---------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 219 (290)
T ss_pred hhhhhheEEEcCCC--cEEeccccccccccCccchhc---------ccCCCCCccccCHHHHccCCcchHhHHHHHHHHH
Confidence 99999999999988 899999999984322111000 0112245679999999888899999999999765
Q ss_pred hHHHHh
Q 000355 322 NFEYLL 327 (1620)
Q Consensus 322 nfeyL~ 327 (1620)
|++++
T Consensus 220 -~el~t 224 (290)
T cd05045 220 -WEIVT 224 (290)
T ss_pred -HHHHh
Confidence 55443
No 418
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.90 E-value=1.4e-23 Score=243.71 Aligned_cols=190 Identities=15% Similarity=0.156 Sum_probs=148.1
Q ss_pred ceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeCC
Q 000355 111 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 190 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~~ 190 (1620)
.||+|+||.||+|.... ...+..+|+|.+.... .......+. +|+.+++.++||||+++++++. .+
T Consensus 2 ~ig~G~~g~v~~~~~~~----~~~~~~vavk~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~ii~~~~~~~-~~ 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM----RKKQIDVAIKVLKNEN-EKSVRDEMM--------REAEIMHQLDNPYIVRMIGVCE-AE 67 (257)
T ss_pred ccCCCCcccEEEEEEec----CCCceeEEEEEccccc-ChHHHHHHH--------HHHHHHHhcCCCCeEEEEEEEc-CC
Confidence 48999999999987522 1345679999986542 222233344 8999999999999999999886 45
Q ss_pred EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCccc
Q 000355 191 LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 269 (1620)
Q Consensus 191 ~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~~ 269 (1620)
..++||||++ ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~ 144 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH--YAKISDFGLSKA 144 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC--cEEeccCCcccc
Confidence 7899999998 499999873 345689999999999999999999999999999999999999988 899999999984
Q ss_pred CCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 270 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
........ .. .....++..|+|||.+....++.++|+|+.|++. |+++
T Consensus 145 ~~~~~~~~---~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~ 192 (257)
T cd05115 145 LGADDSYY---KA-----RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITM-WEAF 192 (257)
T ss_pred ccCCccce---ec-----cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHH-HHHh
Confidence 32111100 00 0111135679999999888899999999999776 4444
No 419
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=2.3e-24 Score=267.62 Aligned_cols=196 Identities=16% Similarity=0.161 Sum_probs=159.0
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
+-+..+.||+|+||+||+|+- .......+...||||.++.. ...+...+|. ||+++|..|+|||||+|+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~-~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~--------REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEA-YGLLPGQDEQLVAVKALKDK-AENQARQDFR--------REAELLAELQHPNIVRLLG 556 (774)
T ss_pred heeehhhhcCchhhhhhhhhc-cCCCCCccceehhHhhhccc-ccHHHHHHHH--------HHHHHHHhccCCCeEEEEE
Confidence 566789999999999999884 21111245688999999764 4444566777 9999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
++..++.+|+|+|||. |||.++|+... ...++..+...|+.||+.|+.||-++.+|||||-..|+||
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV 636 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence 9999999999999999 79999998521 1237888999999999999999999999999999999999
Q ss_pred cCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 252 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 252 ~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
.++. .|||+|||++|..-..+-........ =...||+||-+....|+..+|+|+.|.+.
T Consensus 637 ge~l--~VKIsDfGLsRdiYssDYYk~~~~t~---------lPIRWMppEsIly~kFTteSDVWs~GVvL 695 (774)
T KOG1026|consen 637 GENL--VVKISDFGLSRDIYSSDYYKVRGNTL---------LPIRWMPPESILYGKFTTESDVWSFGVVL 695 (774)
T ss_pred ccce--EEEecccccchhhhhhhhhcccCCce---------eeeecCCHHHhhcCcccchhhhhhhhhhh
Confidence 9999 99999999999432221111111111 13459999999999999999999999764
No 420
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.90 E-value=1.8e-23 Score=243.34 Aligned_cols=197 Identities=15% Similarity=0.116 Sum_probs=156.5
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCC---hhhHHHHHHhcCCCcHhHHHhhccCCccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv 180 (1620)
.+|++.+.||+|+||.||+|.+. .++..+|+|.+...... .+....+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA------DTGRELAVKQVPFDPDSQETSKEVNALE--------CEIQLLKNLRHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc------CCCCEEEEEEEecCcccchhhHHHHHHH--------HHHHHHHHcCCCCcc
Confidence 47899999999999999999862 45789999987543211 12223333 899999999999999
Q ss_pred ceeeEEEeC--CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 181 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 181 ~l~~~~~~~--~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
++++++.+. ..+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-- 143 (264)
T cd06653 68 QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-- 143 (264)
T ss_pred eEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 999998764 468999999985 9999987 345578999999999999999999999999999999999999988
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
.+||+|||+++.......... ......++..|+|||++.+..++.++|+|+.|++. |+.++
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~ 204 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSGT--------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV-VEMLT 204 (264)
T ss_pred CEEECccccccccccccccCc--------cccccCCcccccCHhhhcCCCCCccccHHHHHHHH-HHHHh
Confidence 899999999985432110000 01112367889999999988899999999999766 44443
No 421
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.90 E-value=1.2e-23 Score=247.08 Aligned_cols=200 Identities=18% Similarity=0.181 Sum_probs=157.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||+|....... .....+|+|.+..... ......+. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~--~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGE--KVKIPVAIKVLREETS-PKANKEIL--------DEAYVMASVDHPHVVRL 74 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCC--CcceEEEEEeccCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 4689999999999999999998633211 1234689998866432 22333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.. ...++||||++ |+|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~--~~kL 150 (279)
T cd05057 75 LGICLS-SQVQLITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ--HVKI 150 (279)
T ss_pred EEEEec-CceEEEEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC--eEEE
Confidence 999987 78999999998 599999974 244589999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... ......++..|+|||.+....++.++|.|+.|.+. |+.++
T Consensus 151 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~el~~ 206 (279)
T cd05057 151 TDFGLAKLLDVDEKEY---------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV-WELMT 206 (279)
T ss_pred CCCcccccccCcccce---------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH-HHHhc
Confidence 9999998543211110 01112235679999999888999999999999774 55443
No 422
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.90 E-value=1.5e-23 Score=246.70 Aligned_cols=196 Identities=22% Similarity=0.261 Sum_probs=157.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|++.+.||+|+||.||+|.+. .+++.||+|.++...........+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~ 66 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNK------ATGEIVAIKKFKESEDDEDVKKTAL--------REVKVLRQLRHENIVNLK 66 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeC------CCCcEEEEehhhhhcccccchhHHH--------HHHHHHHhcCCCCeeehh
Confidence 37999999999999999999862 3578999999876433322223333 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 184 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+++..++..++||||+++++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d 143 (288)
T cd07833 67 EAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCD 143 (288)
T ss_pred heEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEe
Confidence 99999999999999999865555443 345589999999999999999999999999999999999999988 899999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccc-ccccccccccccccchHHHHh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~-~y~~~~d~W~~G~isnfeyL~ 327 (1620)
||+++........ ......++..|+|||++.+. .++.++|+|+.|.+. |+++.
T Consensus 144 ~g~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l-~~l~~ 197 (288)
T cd07833 144 FGFARALRARPAS----------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM-AELLD 197 (288)
T ss_pred eecccccCCCccc----------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH-HHHHh
Confidence 9999854322110 01123367889999998887 889999999999654 44443
No 423
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=7.1e-23 Score=219.13 Aligned_cols=256 Identities=22% Similarity=0.272 Sum_probs=201.6
Q ss_pred CCCEEEEeCC-CceeEEee--cccCcEEEEEEccCC-CEEEEeccCCCCCcEEEEEeCC-CCeEEEEEecCCcceeEEEE
Q 000355 1249 LKDESPWKIK-ASILSSIR--AHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICV 1323 (1620)
Q Consensus 1249 D~~i~lWd~~-g~~l~tl~--gH~~~V~svafspdg-~~LaSgs~d~~~DgtVrLWdl~-tg~~l~~l~gH~~~V~sV~f 1323 (1620)
.|++.|-++. +.-++.+. .-.+.+..|+|+++. ..+++|+. ||+++|||+. ...++..++.|...|.+|.|
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~G----DGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdw 112 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASG----DGSLRLFDLTMPSKPIHKFKEHKREVYSVDW 112 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEec----CceEEEeccCCCCcchhHHHhhhhheEEecc
Confidence 3667777775 33333332 357889999999974 56777776 8999999964 34688999999999999999
Q ss_pred eeCCCeE---EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEE
Q 000355 1324 LSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1400 (1620)
Q Consensus 1324 ~~~~~~l---aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~ 1400 (1620)
++-.++. .|.|+|||+||...++.++++.+| ...|....|+|.
T Consensus 113 n~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh------------------------------~~~Iy~a~~sp~---- 158 (311)
T KOG0277|consen 113 NTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGH------------------------------NSCIYQAAFSPH---- 158 (311)
T ss_pred ccccceeEEeeccCCceEeecCCCCcceEeecCC------------------------------ccEEEEEecCCC----
Confidence 8866654 566999999999999999998865 345777888876
Q ss_pred EEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEE
Q 000355 1401 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRL 1480 (1620)
Q Consensus 1401 v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~l 1480 (1620)
.++.++++|.|+++++||++.......+..|. ..+.|+.|+.. +.+.++||+.|+.||.
T Consensus 159 -----~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~------~Eil~cdw~ky----------~~~vl~Tg~vd~~vr~ 217 (311)
T KOG0277|consen 159 -----IPNLFASASGDGTLRLWDVRSPGKFMSIEAHN------SEILCCDWSKY----------NHNVLATGGVDNLVRG 217 (311)
T ss_pred -----CCCeEEEccCCceEEEEEecCCCceeEEEecc------ceeEeeccccc----------CCcEEEecCCCceEEE
Confidence 58899999999999999998754444466544 34666666643 3479999999999999
Q ss_pred EECCCC-cEEEEEEccCCcEEEEE-eCCC-CEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--Eee-cCCEEEE
Q 000355 1481 FDVRSG-NVIASWRAHDGYVTKLA-APED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSV-WGQDVIS 1554 (1620)
Q Consensus 1481 wD~~tg-~~i~~l~gH~~~V~sva-spdg-~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSp-dg~~LaS 1554 (1620)
||+|.- .++..+.+|.-.|+.|+ +|.. .+|+|+|.|=+++|||...+. ..+.+..-|+.-|.. ||+ ++.++|+
T Consensus 218 wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d-s~~e~~~~HtEFv~g~Dws~~~~~~vAs 296 (311)
T KOG0277|consen 218 WDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD-SAIETVDHHTEFVCGLDWSLFDPGQVAS 296 (311)
T ss_pred EehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccch-hhhhhhhccceEEeccccccccCceeee
Confidence 999974 57888999999999999 7764 589999999999999998653 344566778877774 555 4788999
Q ss_pred EeCCc-eEEEe
Q 000355 1555 ISNNK-IGLSS 1564 (1620)
Q Consensus 1555 gs~D~-I~vwd 1564 (1620)
++.|. +.||+
T Consensus 297 ~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 297 TGWDELLYVWN 307 (311)
T ss_pred cccccceeeec
Confidence 99999 99998
No 424
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.90 E-value=1.6e-23 Score=244.18 Aligned_cols=199 Identities=15% Similarity=0.172 Sum_probs=157.3
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
++|+..+.||+|+||.||+|.+.... .....+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~---~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPG---RKEVAVAIKTLKPGY-TEKQRQDFL--------SEASIMGQFSHHNIIRLE 72 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCC---CCceEEEEEeccccC-CHHHHHHHH--------HHHHHHhcCCCCCeeEEE
Confidence 47888999999999999999863211 234589999986542 222333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++...+..++||||+++ +|.+++.. ..+.+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~--~~kl~ 149 (268)
T cd05063 73 GVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL--ECKVS 149 (268)
T ss_pred EEEccCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--cEEEC
Confidence 999999999999999995 99999874 345688999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++.......... .......+..|+|||++.+..++.+.|+|+.|++. |+.+
T Consensus 150 dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il-~ell 204 (268)
T cd05063 150 DFGLSRVLEDDPEGTY--------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM-WEVM 204 (268)
T ss_pred CCccceecccccccce--------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHH-HHHH
Confidence 9999985432111100 00111124569999999888899999999999775 4444
No 425
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.90 E-value=1.2e-23 Score=247.21 Aligned_cols=196 Identities=17% Similarity=0.178 Sum_probs=157.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
...+.++||+|.||+|.+|.- +.+..||||.++.. .......+|. +||++|.+|+|||||+|++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-------eg~lkVAVK~Lr~~-a~~~~r~~F~--------kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-------EGPLKVAVKILRPD-ATKNARNDFL--------KEIKILSRLKHPNIVELLG 602 (807)
T ss_pred heehhhhhcCcccceeEEEEe-------cCceEEEEeecCcc-cchhHHHHHH--------HHHHHHhccCCCCeeEEEe
Confidence 567889999999999999984 44689999999874 3444556676 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+|..++.+++|+|||+ |||.+++..+............|+.||+.||+||.+.++|||||.+.|+|++.++ ++||+|
T Consensus 603 VC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--~iKiad 680 (807)
T KOG1094|consen 603 VCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--TIKIAD 680 (807)
T ss_pred eeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc--cEEecC
Confidence 9999999999999999 7999999865333333444455999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
||++|..-.......++ ...-...|||||-+...+++.++|.|..|.- -||.++.
T Consensus 681 fgmsR~lysg~yy~vqg---------r~vlpiRwmawEsillgkFttaSDvWafgvT-lwE~~~~ 735 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQG---------RAVLPIRWMAWESILLGKFTTASDVWAFGVT-LWEVFML 735 (807)
T ss_pred cccccccccCCceeeec---------ceeeeeeehhHHHHHhccccchhhhhhhHHH-HHHHHHH
Confidence 99999432211111111 1112346999998888899999999999943 3665543
No 426
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=9.9e-23 Score=218.03 Aligned_cols=279 Identities=18% Similarity=0.199 Sum_probs=210.3
Q ss_pred EEEEEccCC-CEEEEeccC---CCCCcEEEEEeCCCCeEEEEEe--cCCcceeEEEEeeCCCeE---EEeCCcEEEEeCC
Q 000355 1273 RSVAVGQDE-CTVFTAGIG---PGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQ 1343 (1620)
Q Consensus 1273 ~svafspdg-~~LaSgs~d---~~~DgtVrLWdl~tg~~l~~l~--gH~~~V~sV~f~~~~~~l---aS~DgtV~IWD~~ 1343 (1620)
.++.|||-- .+||.+... =.-.|++.|-++..++-+..+. .-.+.+.+|+|+++...+ +++||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 577888842 233333210 0014899999987555444433 256889999998875543 6779999999954
Q ss_pred CC-ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEE
Q 000355 1344 TG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1422 (1620)
Q Consensus 1344 tg-~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlw 1422 (1620)
.. .++..+++ |...|.++.++.. .+..++++|.|++||+|
T Consensus 92 ~~s~Pi~~~kE------------------------------H~~EV~Svdwn~~---------~r~~~ltsSWD~TiKLW 132 (311)
T KOG0277|consen 92 MPSKPIHKFKE------------------------------HKREVYSVDWNTV---------RRRIFLTSSWDGTIKLW 132 (311)
T ss_pred CCCcchhHHHh------------------------------hhhheEEeccccc---------cceeEEeeccCCceEee
Confidence 22 23444443 4556777777664 46788899999999999
Q ss_pred ECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEE
Q 000355 1423 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1423 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sv 1502 (1620)
|...++.+.++++|.. .|...+|++. .++.++++|.||++++||++.......+..|...+.++
T Consensus 133 ~~~r~~Sv~Tf~gh~~------~Iy~a~~sp~----------~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~c 196 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGHNS------CIYQAAFSPH----------IPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCC 196 (311)
T ss_pred cCCCCcceEeecCCcc------EEEEEecCCC----------CCCeEEEccCCceEEEEEecCCCceeEEEeccceeEee
Confidence 9999999999997654 4777888763 34899999999999999999644444489999999999
Q ss_pred E--eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecC-CEEEEEeCCc-eEEEeccCCCCCCCcce
Q 000355 1503 A--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSSLSKSADEDGQHR 1576 (1620)
Q Consensus 1503 a--spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1576 (1620)
. ..+..+|+||+.|+.|++||+++-+ .++.++.||.-.|.. |||.. ..|+|+|.|- +++||.++. ++..
T Consensus 197 dw~ky~~~vl~Tg~vd~~vr~wDir~~r-~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~---ds~~- 271 (311)
T KOG0277|consen 197 DWSKYNHNVLATGGVDNLVRGWDIRNLR-TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ---DSAI- 271 (311)
T ss_pred cccccCCcEEEecCCCceEEEEehhhcc-ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc---hhhh-
Confidence 8 4567799999999999999999865 678899999999995 88874 6789999999 999998632 1111
Q ss_pred eeccceeeecCCCCccccEEEEEEecC-CCEEEEEeCCCcEEEcC
Q 000355 1577 LVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1577 ~~~~kl~~~~~g~~h~~~V~svafsPd-g~lLasgs~DG~IrlWd 1620 (1620)
..+ ..|..-|..+.|++. ...+|++|+|+.+.||+
T Consensus 272 ----e~~-----~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 272 ----ETV-----DHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred ----hhh-----hccceEEeccccccccCceeeecccccceeeec
Confidence 111 137778999999985 46899999999999996
No 427
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=1.7e-23 Score=257.61 Aligned_cols=198 Identities=15% Similarity=0.174 Sum_probs=163.7
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Cccccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 180 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv 180 (1620)
..+.|++.+.||.|.||.||++++ ..+++..|+|++.......++.+ .|.+||+.+ .|||++
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~------~~~~~~aa~kI~~~~~d~deEiE-----------~eynil~~~~~hpnv~ 79 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRH------VKTGQLAAIKIMDPTEDEEEEIE-----------LEYNMLKKYSHHPNVA 79 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEee------eecCceeeeEeecCCccccHHHH-----------HHHHHHHhccCCCCcc
Confidence 367899999999999999999986 24678889999876544332221 688888877 589999
Q ss_pred ceeeEEEe-----CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 181 PVLGLLKT-----SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 181 ~l~~~~~~-----~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
.+|++|.. ++.+|||||||. |+.-|+++...+..+.|..+.+|++.++.||.+||.+.+||||||-.|||++.+
T Consensus 80 ~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e 159 (953)
T KOG0587|consen 80 TFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN 159 (953)
T ss_pred eEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc
Confidence 99999974 358999999999 599999997777889999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-----cccccccccccccccchHHHHhhh
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFL 329 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-----~~y~~~~d~W~~G~isnfeyL~~l 329 (1620)
+ .|||+|||++....... .....|.|||+|||||++.. ..|+..+|.|+.| ++.+
T Consensus 160 ~--~VKLvDFGvSaQldsT~-----------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG-------ITaI 219 (953)
T KOG0587|consen 160 A--EVKLVDFGVSAQLDSTV-----------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG-------ITAI 219 (953)
T ss_pred C--cEEEeeeeeeeeeeccc-----------ccccCcCCCcccccceeeecccCCCCCcccccchhhcc-------ceee
Confidence 9 89999999998543211 12345779999999998863 4578899999999 5556
Q ss_pred hcccCCC
Q 000355 330 NKLAGRR 336 (1620)
Q Consensus 330 n~~~gRs 336 (1620)
.+-.|..
T Consensus 220 EladG~P 226 (953)
T KOG0587|consen 220 EMAEGAP 226 (953)
T ss_pred hhcCCCC
Confidence 6666665
No 428
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.90 E-value=2.4e-23 Score=231.92 Aligned_cols=282 Identities=18% Similarity=0.222 Sum_probs=218.3
Q ss_pred ccccccCCCceeccCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcE
Q 000355 1218 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1296 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1296 (1620)
.-.+.||.+.|+++..+-.. ...++|||.||.|++||+. ..+..+++.|.+.|+.+++.. ..++|+|. |++
T Consensus 59 v~~L~gHrdGV~~lakhp~~--ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgd----DKt 130 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNK--LSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGD----DKT 130 (433)
T ss_pred hhhccccccccchhhcCcch--hhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecC----Ccc
Confidence 45678999999986433221 1228999999999999999 678999999999999999998 56888887 899
Q ss_pred EEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccc
Q 000355 1297 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1376 (1620)
Q Consensus 1297 VrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1376 (1620)
|+.|.+.- ..+.++-| ...+..|.-+..+..+++|...|.|||..-..+++.+.-
T Consensus 131 vK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smsw----------------------- 185 (433)
T KOG0268|consen 131 VKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSW----------------------- 185 (433)
T ss_pred eeeeeccC-Ccceeeec-cccccccccccccccccccCceeeecccccCCccceeec-----------------------
Confidence 99999764 46666653 456777776566667799999999999887666665542
Q ss_pred ccccccCCCCCeEEEeecCCceEEEEEecCC-CEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCC
Q 000355 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1455 (1620)
Q Consensus 1377 ~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~ 1455 (1620)
.-+.+.++.++|.. ..|++|+.|++|.+||++++.+++.... ...-+.|||+| .
T Consensus 186 -----------------G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-------~mRTN~IswnP-e 240 (433)
T KOG0268|consen 186 -----------------GADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-------TMRTNTICWNP-E 240 (433)
T ss_pred -----------------CCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-------eccccceecCc-c
Confidence 12224445555544 4566777999999999999998876542 22346788775 3
Q ss_pred ccccCcccCCCCEEEEEecCCcEEEEECCCC-cEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCe
Q 000355 1456 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1533 (1620)
Q Consensus 1456 ~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg-~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1533 (1620)
+-.+++|+.|..++.||+|.. .++...++|.+.|.+|. +|.|+-++|||.|++|+|+.++.+....++
T Consensus 241 ----------afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiY 310 (433)
T KOG0268|consen 241 ----------AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY 310 (433)
T ss_pred ----------ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhh
Confidence 346899999999999999975 57888899999999999 999999999999999999999887544433
Q ss_pred EeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1534 VFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1534 ~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
.-+ .-..|.| ||.|.++++|||+|+ |++|...++
T Consensus 311 htk-RMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 311 HTK-RMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred hHh-hhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 111 1224555 999999999999999 999996543
No 429
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.90 E-value=1.7e-23 Score=244.30 Aligned_cols=192 Identities=18% Similarity=0.110 Sum_probs=146.8
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|... ....+..+|+|.++.... ......+. +|+.+++.++||||+++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~----~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~ 67 (269)
T cd05087 1 KEIGNGWFGKVILGEVN----SGYTPAQVVVKELRVSAS-VQEQMKFL--------EEAQPYRSLQHSNLLQCLGQCTEV 67 (269)
T ss_pred CcccccCCceEEEEEEc----CCCCceEEEEEecCCCCC-hHHHHHHH--------HHHHHHHhCCCCCEeeEEEEEcCC
Confidence 46999999999999852 123457799998865432 22233444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 190 GLITSVIPKTP-YTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
..+++||||++ |+|.+++.... ....+...++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~--~~kL~dfg 145 (269)
T cd05087 68 TPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL--TVKIGDYG 145 (269)
T ss_pred CCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEECCcc
Confidence 99999999999 59999997422 22456667788999999999999999999999999999999988 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhccccc-------ccccccccccccccchHHHH
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-------DWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~-------~y~~~~d~W~~G~isnfeyL 326 (1620)
+++........ .. .....++..|+|||++.+. .++.++|+|+.|.+. |+.+
T Consensus 146 ~~~~~~~~~~~---~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~ 203 (269)
T cd05087 146 LSHNKYKEDYY---VT------PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI-WELF 203 (269)
T ss_pred ccccccCccee---ec------CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHH-HHHH
Confidence 99742211100 00 0112246779999988643 357899999999765 4444
No 430
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.90 E-value=2e-23 Score=242.48 Aligned_cols=193 Identities=15% Similarity=0.127 Sum_probs=155.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++.+ ..+..+|+|.+..... ....+. +|+++++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~-------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSM---SVEAFL--------AEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEe-------cCCccEEEEecCCChh---HHHHHH--------HHHHHHHhcCCCCcceE
Confidence 57899999999999999999975 3445699998865321 223344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.. ...++||||++ ++|.+++.......++...+..++.||+.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKI 143 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEE
Confidence 999887 77899999998 5999999854455678888899999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... .....++..|+|||++....++..+|.|+.|++. |+.++
T Consensus 144 ~d~~~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l-~~l~t 198 (260)
T cd05073 144 ADFGLARVIEDNEYTA----------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL-MEIVT 198 (260)
T ss_pred CCCcceeeccCCCccc----------ccCCcccccccCHhHhccCCcCccccchHHHHHH-HHHHh
Confidence 9999997432111000 0011234569999999988899999999999776 55443
No 431
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.90 E-value=2.8e-24 Score=224.81 Aligned_cols=197 Identities=19% Similarity=0.264 Sum_probs=156.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc-cCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG-CLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~-~l~HpNIv~ 181 (1620)
.++...+..||+|+||.|-+-++ ...|.+.|+|.+... ...+..++.+ +|+.+.. ....|.+|.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh------~~sg~imAvKri~~t-vn~q~q~r~L--------~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRH------IQSGTIMAVKRIRAT-VNSQEQKRLL--------MDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhhcCCccchhhheee------ccCCeEEEEeeehhh-cChHHHHHHH--------HhhhhhccCCCCCeEEE
Confidence 34667788999999999988775 367899999999764 3445555555 7888754 447899999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~ 258 (1620)
+|+.+.....++|.||.|..+|..+.+. ..++..+|.-+-.|+..++.||.|||+ ..|||||+||+||||+.+| +
T Consensus 110 FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--q 187 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--Q 187 (282)
T ss_pred eehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--c
Confidence 9999999999999999999888776653 467788999999999999999999999 4899999999999999999 9
Q ss_pred EEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc----ccccccccccccccccchHHHHhhhhcccC
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 334 (1620)
Q Consensus 259 lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~----~~~y~~~~d~W~~G~isnfeyL~~ln~~~g 334 (1620)
+||||||.+......-.. + ..++|. .|||||.+. +..|+-++|+|+.| ++.+++..+
T Consensus 188 VKiCDFGIsG~L~dSiAk-----t----~daGCk---pYmaPEri~~e~n~~gY~vksDvWSLG-------ItmiElA~l 248 (282)
T KOG0984|consen 188 VKICDFGISGYLVDSIAK-----T----MDAGCK---PYMAPERINPELNQKGYSVKSDVWSLG-------ITMIEMAIL 248 (282)
T ss_pred EEEcccccceeehhhhHH-----H----HhcCCC---ccCChhhcCcccCcccceeehhhhhhh-------hhhhhhhhc
Confidence 999999999854322111 1 012333 599999765 45899999999999 445555555
Q ss_pred C
Q 000355 335 R 335 (1620)
Q Consensus 335 R 335 (1620)
|
T Consensus 249 r 249 (282)
T KOG0984|consen 249 R 249 (282)
T ss_pred c
Confidence 4
No 432
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.90 E-value=1.3e-23 Score=246.41 Aligned_cols=204 Identities=15% Similarity=0.062 Sum_probs=157.4
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.... ....+..+|+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRD-GDAVELQVAVKTLPESC-SEQDESDFL--------MEALIMSKFNHQNIVRL 74 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCC-CCCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 357999999999999999999863211 11256789999886532 222233455 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPN-----ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
++++.+.+..++||||++ ++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+|||++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 75 IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC
Confidence 999999999999999998 599999974321 25788899999999999999999999999999999999986542
Q ss_pred -eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 257 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 257 -~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
..+||+|||+++.......... . ..-..+..|||||++.+..++.++|+|+.|++. |+++
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~-~--------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il-~el~ 215 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYRK-G--------GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL-WEIF 215 (277)
T ss_pred CcceEeccCccccccCCccceec-C--------CCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH-HHHH
Confidence 2689999999985421110000 0 000124569999999988999999999999876 5555
No 433
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.2e-22 Score=235.05 Aligned_cols=272 Identities=17% Similarity=0.244 Sum_probs=216.1
Q ss_pred ccCcEEEEEEccCC--CEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCC
Q 000355 1268 HHGALRSVAVGQDE--CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ 1343 (1620)
Q Consensus 1268 H~~~V~svafspdg--~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~ 1343 (1620)
-.++|.+++|+|.. ...+|+| ..|.|++..+....+++....+.|.+++|..||..++.+ .|.|+|+|.+
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k 98 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK 98 (487)
T ss_pred ccCcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc
Confidence 45789999999954 3455555 689999999888888888889999999999999998666 5899999977
Q ss_pred CCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEE
Q 000355 1344 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFID 1423 (1620)
Q Consensus 1344 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwD 1423 (1620)
+...++.+..| +.++..+.|++. ++..+++|++|+.+++||
T Consensus 99 ~r~iLR~~~ah------------------------------~apv~~~~f~~~---------d~t~l~s~sDd~v~k~~d 139 (487)
T KOG0310|consen 99 SRVILRQLYAH------------------------------QAPVHVTKFSPQ---------DNTMLVSGSDDKVVKYWD 139 (487)
T ss_pred cHHHHHHHhhc------------------------------cCceeEEEeccc---------CCeEEEecCCCceEEEEE
Confidence 64445555443 445566666654 567788999999999999
Q ss_pred CCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC-cEEEEEEccCCcEEEE
Q 000355 1424 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKL 1502 (1620)
Q Consensus 1424 l~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg-~~i~~l~gH~~~V~sv 1502 (1620)
+.++.....+.+| .+.|+|.++++. ++..++||+.||.|++||+|+. ..+..+. |..+|-+|
T Consensus 140 ~s~a~v~~~l~~h------tDYVR~g~~~~~----------~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~v 202 (487)
T KOG0310|consen 140 LSTAYVQAELSGH------TDYVRCGDISPA----------NDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESV 202 (487)
T ss_pred cCCcEEEEEecCC------cceeEeeccccC----------CCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeE
Confidence 9998865566654 556899988753 3468999999999999999987 6677776 99999999
Q ss_pred E-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCCcceee
Q 000355 1503 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLV 1578 (1620)
Q Consensus 1503 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~ 1578 (1620)
. -|.|..++|++ .+.|++||+-+|. +.+..+..|...|+| +..++..|+|||-|+ |++||+.. .
T Consensus 203 l~lpsgs~iasAg-Gn~vkVWDl~~G~-qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~-------~--- 270 (487)
T KOG0310|consen 203 LALPSGSLIASAG-GNSVKVWDLTTGG-QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN-------Y--- 270 (487)
T ss_pred EEcCCCCEEEEcC-CCeEEEEEecCCc-eehhhhhcccceEEEEEeecCCceEeecccccceEEEEccc-------e---
Confidence 9 88999999998 5589999999773 444555669999997 777889999999999 99999641 1
Q ss_pred ccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEE
Q 000355 1579 PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1618 (1620)
Q Consensus 1579 ~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~Irl 1618 (1620)
....+-+..++|.+++.+|+++.++.|..||.+-+
T Consensus 271 -----Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 271 -----KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred -----EEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 11111246788999999999999999999998754
No 434
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.90 E-value=2e-23 Score=245.33 Aligned_cols=200 Identities=16% Similarity=0.117 Sum_probs=157.4
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|+..++||+|+||.||++..... ....++..+|+|.+... .......+. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 73 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNL-LPEQDKMLVAVKALKEA--SESARQDFQ--------REAELLTVLQHQHIVRFY 73 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecC-CCCCCceEEEEEecCcC--CHHHHHHHH--------HHHHHHhcCCCCCCceEE
Confidence 4678899999999999999874221 11245678999987653 233333444 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCce
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSPN-------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 249 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 249 (1620)
+++...+..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~ni 153 (280)
T cd05092 74 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNC 153 (280)
T ss_pred EEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhE
Confidence 99999999999999998 599999974321 3478888999999999999999999999999999999
Q ss_pred EecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 250 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 250 Ll~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|+++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|+|. |+.+
T Consensus 154 l~~~~~--~~kL~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 218 (280)
T cd05092 154 LVGQGL--VVKIGDFGMSRDIYSTDYYR---------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL-WEIF 218 (280)
T ss_pred EEcCCC--CEEECCCCceeEcCCCceee---------cCCCccccccccCHHHhccCCcCchhhHHHHHHHH-HHHH
Confidence 999988 89999999997432111000 01112245679999999999999999999999775 4444
No 435
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.90 E-value=1.8e-22 Score=229.33 Aligned_cols=265 Identities=20% Similarity=0.246 Sum_probs=227.2
Q ss_pred eEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeE
Q 000355 1242 FLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1320 (1620)
Q Consensus 1242 ~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~s 1320 (1620)
++.||+.|+++.++|.. ...+.+++||+..|+++.|+++...++++|. |..|+||.+....+......|.++|+.
T Consensus 233 ~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa----d~~i~vws~~~~s~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA----DEIIRVWSVPLSSEPTSSRPHEEPVTG 308 (506)
T ss_pred cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC----cceEEeeccccccCcccccccccccee
Confidence 38999999999999988 7789999999999999999999999999998 899999999988888888899999999
Q ss_pred EEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCce
Q 000355 1321 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1398 (1620)
Q Consensus 1321 V~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1398 (1620)
+..+|.|.++ +|.||+..+.|.++|.++....... +.-.+
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~--------------------------------------s~v~~ 350 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET--------------------------------------SDVEY 350 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc--------------------------------------cccee
Confidence 9999999999 6669999999999999876554321 01137
Q ss_pred EEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcE
Q 000355 1399 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1478 (1620)
Q Consensus 1399 t~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I 1478 (1620)
++.+++|||..+.+|+.||.|++||+.++..+..|.+|.+ .|.+|+|+ -+|-|+|++++|+.|
T Consensus 351 ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~------~vk~i~Fs-----------ENGY~Lat~add~~V 413 (506)
T KOG0289|consen 351 TSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTG------PVKAISFS-----------ENGYWLATAADDGSV 413 (506)
T ss_pred EEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCC------ceeEEEec-----------cCceEEEEEecCCeE
Confidence 8888999999999999999999999999998888887654 58999986 456799999999999
Q ss_pred EEEECCCCcEEEEEEcc-CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEE
Q 000355 1479 RLFDVRSGNVIASWRAH-DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVIS 1554 (1620)
Q Consensus 1479 ~lwD~~tg~~i~~l~gH-~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaS 1554 (1620)
++||+|..+...++.-. ...|.++. .+.|.+|+.++.|=+|++++-.+....++..+..|.+..++ |.-..+++++
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s 493 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLAS 493 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEee
Confidence 99999988877777633 24689999 88899999999888888888666555777788888866664 8888899999
Q ss_pred EeCCc-eEEEec
Q 000355 1555 ISNNK-IGLSSL 1565 (1620)
Q Consensus 1555 gs~D~-I~vwdl 1565 (1620)
+|.|. .+++.+
T Consensus 494 ~smd~~l~~~a~ 505 (506)
T KOG0289|consen 494 TSMDAILRLYAL 505 (506)
T ss_pred ccchhheEEeec
Confidence 99999 777653
No 436
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.90 E-value=2.2e-23 Score=242.05 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=154.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.+...... ...+. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~lK~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTW-------NGTTKVAIKTLKPGTMM---PEAFL--------QEAQIMKKLRHDKLVPL 66 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEE-------cCCceEEEEEcccCCcc---HHHHH--------HHHHHHHhCCCCCeeeE
Confidence 36799999999999999999985 23346899988654322 22334 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+|||+++++ .+||
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~--~~~l 143 (260)
T cd05069 67 YAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL--VCKI 143 (260)
T ss_pred EEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--eEEE
Confidence 99875 4568999999985 999999854445578889999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... .....++..|+|||...+..++..+|+|+.|.+. |++++
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l-~el~t 198 (260)
T cd05069 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL-TELVT 198 (260)
T ss_pred CCCccceEccCCcccc----------cCCCccchhhCCHHHhccCCcChHHHHHHHHHHH-HHHHh
Confidence 9999998532111000 0112245679999999888899999999999776 55544
No 437
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.90 E-value=2.8e-23 Score=246.18 Aligned_cols=214 Identities=12% Similarity=0.015 Sum_probs=150.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHH-hcCCCcHhHHHhhccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLR-LIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~-~~~~~~~~Ei~iL~~l~HpNIv~ 181 (1620)
..+|++.+.||+|+||.||+|.+... ...+..+|+|................+ ......+.+...+..+.|+||++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~---~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASD---HCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCC---cccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 35899999999999999999986221 112456677764432221111100100 00001124555667789999999
Q ss_pred eeeEEEeCC----EEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 182 VLGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 182 l~~~~~~~~----~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+++++.... ..+++||++..++.+++.. ....++..++.++.|++.||.|||+++|+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~-- 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN-- 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--
Confidence 999876554 4578899988888888763 33457888899999999999999999999999999999999888
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ 328 (1620)
.+||+|||+|+............. .......||+.|+|||+..+..|+.++|+|+.|++. |+++.+
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~----~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l-~el~~g 229 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSK----EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM-LKWAGI 229 (294)
T ss_pred cEEEEEcCCceeeccCCccccccc----ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH-HHHHhC
Confidence 899999999985432111100000 011223489999999999999999999999999765 555443
No 438
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.90 E-value=1.3e-23 Score=243.23 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=153.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
..+|++.+.||+|+||.||++.. .+..+|+|.+.... ..+.+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~~k~~~~~~----~~~~~~--------~e~~~l~~l~~~~i~~~ 64 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 64 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--------cCCcEEEEEeCCCc----hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 45899999999999999999874 36778999986432 122344 89999999999999999
Q ss_pred eeEEE-eCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 183 LGLLK-TSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 183 ~~~~~-~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
++++. .++..++||||++ ++|.++++......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~k 142 (256)
T cd05082 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAK 142 (256)
T ss_pred EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC--cEE
Confidence 99764 4567999999998 4999999854445578889999999999999999999999999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|+|||+++...... ....++..|+|||++.+..++.++|+|+.|++. |+++
T Consensus 143 l~dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~-~~l~ 193 (256)
T cd05082 143 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIY 193 (256)
T ss_pred ecCCccceeccccC--------------CCCccceeecCHHHHccCCCCchhhhHHHHHHH-HHHH
Confidence 99999988432110 011134579999999998999999999999776 4444
No 439
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.90 E-value=1.6e-23 Score=248.06 Aligned_cols=203 Identities=16% Similarity=0.164 Sum_probs=156.5
Q ss_pred CCCeeeeeceeeeeeEEEEEEEeccccc--------ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSG--------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL 174 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~--------~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l 174 (1620)
..+|++.+.||+|+||.||+|++..... .......||+|.+... ........+. +|+++++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~--------~ei~~l~~l 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFL--------KEIKIMSRL 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHH--------HHHHHHHhC
Confidence 3589999999999999999988532100 0112346899998753 2223333444 899999999
Q ss_pred CcccccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000355 175 RHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 243 (1620)
Q Consensus 175 ~HpNIv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 243 (1620)
+||||+++++++...+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||++|++|||
T Consensus 75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999999999999999999999999995 9999986321 11357778889999999999999999999999
Q ss_pred CCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchH
Q 000355 244 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNF 323 (1620)
Q Consensus 244 LKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnf 323 (1620)
|||+|||++.++ .+||+|||+++........ .......++..|+|||++.+..++.++|+|+.|.+. |
T Consensus 155 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l-~ 222 (295)
T cd05097 155 LATRNCLVGNHY--TIKIADFGMSRNLYSGDYY---------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL-W 222 (295)
T ss_pred cChhhEEEcCCC--cEEecccccccccccCcce---------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHH-H
Confidence 999999999988 8999999999843211100 001122346789999999888899999999999776 4
Q ss_pred HHH
Q 000355 324 EYL 326 (1620)
Q Consensus 324 eyL 326 (1620)
+++
T Consensus 223 el~ 225 (295)
T cd05097 223 EMF 225 (295)
T ss_pred HHH
Confidence 444
No 440
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.90 E-value=1.2e-22 Score=242.16 Aligned_cols=272 Identities=18% Similarity=0.282 Sum_probs=215.6
Q ss_pred ccccccCCCceec-cCCCCCCCCCCeEEEEcCCCCEEEEeCCCc---eeEEeecccCcEEE-EEEcc-CCCEEEEeccCC
Q 000355 1218 TSNLMKCEPWFWF-PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRS-VAVGQ-DECTVFTAGIGP 1291 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~-~Spdg~~~~~~~lasgS~D~~i~lWd~~g~---~l~tl~gH~~~V~s-vafsp-dg~~LaSgs~d~ 1291 (1620)
...+.||..-|.+ ..-++.+ ++++|.|+++++|+-.++ ....+.+|.+-|.+ +++-+ ++-.+++|+.
T Consensus 7 s~~l~gH~~DVr~v~~~~~~~-----i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~-- 79 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTDGVC-----IISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGM-- 79 (745)
T ss_pred EEEeccCccchheeEecCCeE-----EeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecc--
Confidence 3457788877765 2233344 999999999999998744 33568899999888 88876 3446999997
Q ss_pred CCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccc
Q 000355 1292 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1370 (1620)
Q Consensus 1292 ~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1370 (1620)
|.+|.+|......++.+++||+..|.+++...++..+ +|+|.|+++|-. |++...+.+|
T Consensus 80 --D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH---------------- 139 (745)
T KOG0301|consen 80 --DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGH---------------- 139 (745)
T ss_pred --cceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCc----------------
Confidence 9999999999999999999999999999977777755 788999999974 5665555554
Q ss_pred ccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEe
Q 000355 1371 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1450 (1620)
Q Consensus 1371 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva 1450 (1620)
+..|+++.+-+. + .++|||.|++||+|.- ++++++|.+|.. .|+.++
T Consensus 140 --------------~asVWAv~~l~e----------~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD------~VRgL~ 186 (745)
T KOG0301|consen 140 --------------TASVWAVASLPE----------N-TYVTGSADKTIKLWKG--GTLLKTFSGHTD------CVRGLA 186 (745)
T ss_pred --------------chheeeeeecCC----------C-cEEeccCcceeeeccC--Cchhhhhccchh------heeeeE
Confidence 445666655542 3 8999999999999985 788899997654 488888
Q ss_pred eeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC
Q 000355 1451 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1529 (1620)
Q Consensus 1451 ~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~ 1529 (1620)
+-+ +..+++++.||.|++||+ +|+++..+.||.+-|.+++ ..++..++|+++|++++||+..
T Consensus 187 vl~------------~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~---- 249 (745)
T KOG0301|consen 187 VLD------------DSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD---- 249 (745)
T ss_pred Eec------------CCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC----
Confidence 743 246899999999999999 7999999999999999999 8888999999999999999876
Q ss_pred CCCeEeecCCCCEEEE-eecCCEEEEEeCCc-eEEEecc
Q 000355 1530 SQPTVFKGHTNGISGF-SVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1530 ~~~~~l~gH~~~V~af-Spdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
.+...+.-.+..|++. ...+..+++|+.|| |+||..+
T Consensus 250 e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 250 ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 3334554445567752 23355677777788 9999976
No 441
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.90 E-value=2.5e-23 Score=240.87 Aligned_cols=193 Identities=17% Similarity=0.133 Sum_probs=153.7
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|.+... ......+|+|.+...... ...+.+. +|+.+++.++||||+++++++..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~---~~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTS---GGKVIPVAVKCLKSDKLS-DIMDDFL--------KEAAIMHSLDHENLIRLYGVVLT- 67 (257)
T ss_pred CcCCccCcccEEeeeEecC---CCCceEEEEeecCCcccH-HHHHHHH--------HHHHHHhhcCCCCccceeEEEcC-
Confidence 4689999999999986321 123457999999775433 3334444 89999999999999999999988
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
...++||||++ ++|.+.+.......+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--~~kl~dfg~~~ 145 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLMR 145 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--EEEeccccccc
Confidence 89999999998 5999999853335678899999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
........... .....++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 146 ~~~~~~~~~~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l-~el~ 194 (257)
T cd05040 146 ALPQNEDHYVM--------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTL-WEMF 194 (257)
T ss_pred cccccccceec--------ccCCCCCceecCHHHhcccCcCchhhhHHHHHHH-HHHH
Confidence 54321111000 0112356779999999999999999999999776 4444
No 442
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.90 E-value=1.5e-23 Score=242.62 Aligned_cols=188 Identities=19% Similarity=0.168 Sum_probs=157.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.. .++.+|+|.+..... ..+++. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDST---AAQAFL--------AEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--------cCcEEEEEEeccchh---HHHHHH--------HHHHHHHhcCCcceeee
Confidence 45789999999999999999984 368899999975422 233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+.+..++||||++ ++|.++++......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~--~~~l 143 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKV 143 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC--CEEE
Confidence 999999999999999999 5999999854444789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||.++....... ....+..|+|||.+....++.++|+|+.|.+. |+.+
T Consensus 144 ~d~g~~~~~~~~~~--------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il-~~l~ 193 (256)
T cd05039 144 SDFGLAKEASQGQD--------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILL-WEIY 193 (256)
T ss_pred cccccccccccccc--------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHH-HHHH
Confidence 99999985421100 01134569999999888899999999999775 4443
No 443
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=2.5e-21 Score=214.59 Aligned_cols=277 Identities=17% Similarity=0.187 Sum_probs=223.0
Q ss_pred EEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEe--CCcEE
Q 000355 1263 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASC--DGTLH 1338 (1620)
Q Consensus 1263 ~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~--DgtV~ 1338 (1620)
+.++.-.+.|+++.|+++|..+++++. |.+++|+|..+|++++++..++-.|..++|......+ +|. |.+||
T Consensus 8 k~f~~~~~~i~sl~fs~~G~~litss~----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 8 KVFRETNGKINSLDFSDDGLLLITSSE----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred cccccCCCceeEEEecCCCCEEEEecC----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence 445556778999999999999999987 8899999999999999999888999999998777766 444 99999
Q ss_pred EEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCc
Q 000355 1339 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1418 (1620)
Q Consensus 1339 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~Dgt 1418 (1620)
.-++.+.+.++.|.+|.. .|+.+..+|-++.+++++.|++
T Consensus 84 yLsl~dNkylRYF~GH~~----------------------------------------~V~sL~~sP~~d~FlS~S~D~t 123 (311)
T KOG1446|consen 84 YLSLHDNKYLRYFPGHKK----------------------------------------RVNSLSVSPKDDTFLSSSLDKT 123 (311)
T ss_pred EEEeecCceEEEcCCCCc----------------------------------------eEEEEEecCCCCeEEecccCCe
Confidence 999999999999998742 3667777778899999999999
Q ss_pred EEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC--cEEEEEE---
Q 000355 1419 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG--NVIASWR--- 1493 (1620)
Q Consensus 1419 VrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg--~~i~~l~--- 1493 (1620)
||+||++..++...+..... ..++| .|+|-++|+|...+.|++||+|+- .+..++.
T Consensus 124 vrLWDlR~~~cqg~l~~~~~--------pi~Af-----------Dp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~ 184 (311)
T KOG1446|consen 124 VRLWDLRVKKCQGLLNLSGR--------PIAAF-----------DPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITD 184 (311)
T ss_pred EEeeEecCCCCceEEecCCC--------cceeE-----------CCCCcEEEEecCCCeEEEEEecccCCCCceeEccCC
Confidence 99999998887765553222 22344 377789999998889999999964 3555554
Q ss_pred ccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCE----E-EEeecCCEEEEEeCCc-eEEEecc
Q 000355 1494 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI----S-GFSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1494 gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V----~-afSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
+-....+.+. +|||++++-+...+.+++.|.-+| ....++.++...- . +|+||++++++|++|| |.+|+++
T Consensus 185 ~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G--~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 185 NDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG--TVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred CCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC--cEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 3356788899 999999999999999999999998 4566777776543 3 4999999999999999 9999985
Q ss_pred CCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1567 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1567 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
+|....+. +| .+.++++++.|+|.-.++|+++ ..+-+|
T Consensus 263 -----tg~~v~~~-------~~-~~~~~~~~~~fnP~~~mf~sa~--s~l~fw 300 (311)
T KOG1446|consen 263 -----TGKKVAVL-------RG-PNGGPVSCVRFNPRYAMFVSAS--SNLVFW 300 (311)
T ss_pred -----CCcEeeEe-------cC-CCCCCccccccCCceeeeeecC--ceEEEE
Confidence 34332211 12 2567899999999999998774 556666
No 444
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.90 E-value=3.7e-23 Score=238.31 Aligned_cols=187 Identities=17% Similarity=0.162 Sum_probs=149.4
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|.. .++..+|+|.+.... .......+. +|+++++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~-------~~~~~~a~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-------KDKTPVAVKTCKEDL-PQELKIKFL--------SEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEe-------cCCcEEEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCCcCeEEEEEecC
Confidence 4699999999999874 456789999986532 222222344 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||++ ++|.+++... ...+.+..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~d~g~~~ 141 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (250)
T ss_pred CccEEEEECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC--eEEECCCccce
Confidence 99999999998 5999988742 34578889999999999999999999999999999999999998 89999999997
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
....... ... ....++..|+|||++.+..++.++|+|+.|.+. |+.+
T Consensus 142 ~~~~~~~----~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll-~~~~ 188 (250)
T cd05085 142 QEDDGIY----SSS------GLKQIPIKWTAPEALNYGRYSSESDVWSYGILL-WETF 188 (250)
T ss_pred ecccccc----ccC------CCCCCcccccCHHHhccCCCCchhHHHHHHHHH-HHHh
Confidence 4321100 000 111235579999999988899999999999765 4433
No 445
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.90 E-value=3.3e-23 Score=240.95 Aligned_cols=198 Identities=22% Similarity=0.203 Sum_probs=155.9
Q ss_pred eeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEE
Q 000355 107 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 186 (1620)
Q Consensus 107 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~ 186 (1620)
++.+.||.|+||.||+|.... .....+..|+||.++.. ...+...++. +|++++++++||||+++++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPS-SSEEEEEEFL--------NEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTT-SSHHHHHHHH--------HHHHHHHTHSBTTBE-EEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccc-cccccceeee--------ecccccccccccccccccccc
Confidence 467899999999999999742 12356788999999552 3334455666 899999999999999999999
Q ss_pred EeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecC
Q 000355 187 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 265 (1620)
Q Consensus 187 ~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFG 265 (1620)
...+.+++||||++ |+|.+++.......++......++.||+.||.|||+++|+||||+|+|||++.++ .+||+|||
T Consensus 71 ~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~--~~Kl~~f~ 148 (259)
T PF07714_consen 71 IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG--QVKLSDFG 148 (259)
T ss_dssp ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT--EEEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 98888999999998 5999999965456789999999999999999999999999999999999999999 89999999
Q ss_pred CcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 266 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 266 la~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+++........ ...........|+|||.+....++.++|+|+.|.+. ||.++
T Consensus 149 ~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l-~ei~~ 200 (259)
T PF07714_consen 149 LSRPISEKSKY---------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLL-YEILT 200 (259)
T ss_dssp TGEETTTSSSE---------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHH-HHHHT
T ss_pred ccccccccccc---------cccccccccccccccccccccccccccccccccccc-ccccc
Confidence 99854211111 111222355679999999998999999999999554 44443
No 446
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.90 E-value=3.3e-24 Score=248.69 Aligned_cols=205 Identities=17% Similarity=0.183 Sum_probs=172.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCc------c
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH------P 177 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~H------p 177 (1620)
.+|.+....|+|-|+.|..|.+. ..|..||||+|..+.... +.- ++|++||++|+. -
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~------~r~~~vAiKIIRnNE~M~---KtG--------l~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQ------ARGQEVAIKIIRNNEVMH---KTG--------LKELEILKKLNDADPEDKF 494 (752)
T ss_pred ceeEEEeccccceeeeeeecccc------CCCCeeEEEEeecchHHh---hhh--------hHHHHHHHHhhccCchhhh
Confidence 38999999999999999999873 346799999998754332 222 389999999953 4
Q ss_pred cccceeeEEEeCCEEEEEEeCCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc
Q 000355 178 NVAPVLGLLKTSGLITSVIPKTPYTLENILQF-SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 256 (1620)
Q Consensus 178 NIv~l~~~~~~~~~~~lV~E~~~g~L~~~l~~-~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~ 256 (1620)
++++|+-.|...+++|||+|-+.-+|.++++. ..+..+....++.|++|+..||..|-..||+|.||||+|||+++...
T Consensus 495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 89999999999999999999999999999984 44556888999999999999999999999999999999999998874
Q ss_pred eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCC
Q 000355 257 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 336 (1620)
Q Consensus 257 ~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs 336 (1620)
.+||||||.|..... +..+| +--+.+|+|||++.+.+|+...|.|+.||-. ||..++--+|.|++
T Consensus 575 -iLKLCDfGSA~~~~e-----neitP--------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctL-YElYtGkIlFpG~T 639 (752)
T KOG0670|consen 575 -ILKLCDFGSASFASE-----NEITP--------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTL-YELYTGKILFPGRT 639 (752)
T ss_pred -eeeeccCcccccccc-----ccccH--------HHHHHhccCcceeecCcccCCccceeeceee-EEeeccceecCCCC
Confidence 899999999985432 12222 2245689999999999999999999999877 88888888999998
Q ss_pred CCCC
Q 000355 337 WGDY 340 (1620)
Q Consensus 337 ~~dl 340 (1620)
.|++
T Consensus 640 NN~M 643 (752)
T KOG0670|consen 640 NNQM 643 (752)
T ss_pred cHHH
Confidence 7654
No 447
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.90 E-value=2.3e-22 Score=239.78 Aligned_cols=271 Identities=21% Similarity=0.337 Sum_probs=215.9
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE--EEEecCCcceeE-EEEee-CCCeE--EEeC
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV--SGYYGHEEVVND-ICVLS-SSGRI--ASCD 1334 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l--~~l~gH~~~V~s-V~f~~-~~~~l--aS~D 1334 (1620)
.-+.+.||...|+.|++.++. .+++||. ||++++|+-..++.+ ..+.+|.+.|.. +++.+ +..++ ++.|
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sR----d~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV-CIISGSR----DGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred eEEEeccCccchheeEecCCe-EEeecCC----CCceeeeeccCcccccceecccCcceeeccceeccccCcceEeeccc
Confidence 457899999999999988665 7889997 899999998766554 357789998887 99875 33334 5669
Q ss_pred CcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1335 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1335 gtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
++|.+|...+..+..++.+|... |+|++...++. +++||
T Consensus 81 ~~i~v~~~~~~~P~~~LkgH~sn----------------------------------------VC~ls~~~~~~-~iSgS 119 (745)
T KOG0301|consen 81 TTIIVFKLSQAEPLYTLKGHKSN----------------------------------------VCSLSIGEDGT-LISGS 119 (745)
T ss_pred ceEEEEecCCCCchhhhhccccc----------------------------------------eeeeecCCcCc-eEecc
Confidence 99999999999999999887532 66666666666 99999
Q ss_pred CCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEc
Q 000355 1415 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1494 (1620)
Q Consensus 1415 ~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~g 1494 (1620)
.|.|+++|-. +++...+.+| ...|.++++-+ .+ .++|||.|.+|++|.- ++.++++.|
T Consensus 120 WD~TakvW~~--~~l~~~l~gH------~asVWAv~~l~-----------e~-~~vTgsaDKtIklWk~--~~~l~tf~g 177 (745)
T KOG0301|consen 120 WDSTAKVWRI--GELVYSLQGH------TASVWAVASLP-----------EN-TYVTGSADKTIKLWKG--GTLLKTFSG 177 (745)
T ss_pred cccceEEecc--hhhhcccCCc------chheeeeeecC-----------CC-cEEeccCcceeeeccC--Cchhhhhcc
Confidence 9999999975 5666667765 44577877643 33 7899999999999986 789999999
Q ss_pred cCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEEEe--ecCCEEEEEeCCc-eEEEeccCCCCC
Q 000355 1495 HDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFS--VWGQDVISISNNK-IGLSSLSKSADE 1571 (1620)
Q Consensus 1495 H~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afS--pdg~~LaSgs~D~-I~vwdl~~~~~~ 1571 (1620)
|.+.|+.++--++..++|||.||.|+.|++ ++ ..+.++.||++-|.+++ .+++.++|++.|+ +++|+..
T Consensus 178 HtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~----- 249 (745)
T KOG0301|consen 178 HTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DG--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD----- 249 (745)
T ss_pred chhheeeeEEecCCCeEeecCCceEEEEec-cC--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-----
Confidence 999999999434556899999999999999 45 66789999999999855 6788999999999 9999953
Q ss_pred CCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1572 DGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1572 ~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+ .+.+. . ....|+++++.++|.++ +|+.||.||||
T Consensus 250 --e~---~q~I~-l-----PttsiWsa~~L~NgDIv-vg~SDG~VrVf 285 (745)
T KOG0301|consen 250 --EC---VQVIT-L-----PTTSIWSAKVLLNGDIV-VGGSDGRVRVF 285 (745)
T ss_pred --ce---EEEEe-c-----CccceEEEEEeeCCCEE-EeccCceEEEE
Confidence 11 11111 0 22369999999999865 67779999998
No 448
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=4e-23 Score=249.40 Aligned_cols=203 Identities=17% Similarity=0.156 Sum_probs=156.8
Q ss_pred CCeeeeeceeeeeeEEEEEEEeccccc-ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSG-CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.+|++.+.||+|+||.||+|++....+ .......+|+|.+... .......++. +|+++++++ +||||++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLV--------SEMEMMKMIGKHKNIIN 82 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 479999999999999999998522111 1123457899988643 2233334444 899999999 7999999
Q ss_pred eeeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 246 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 246 (1620)
+++++..++.+++||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 9999999999999999998 59999997421 22466777888999999999999999999999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||++.++ .+||+|||+++......... . ...-.++..|||||++.+..++.++|+|+.|++. |+++
T Consensus 163 ~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~ 230 (334)
T cd05100 163 RNVLVTEDN--VMKIADFGLARDVHNIDYYK---K------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL-WEIF 230 (334)
T ss_pred ceEEEcCCC--cEEECCcccceecccccccc---c------ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH-HHHH
Confidence 999999998 89999999998532211000 0 0011134579999999999999999999999776 5554
Q ss_pred h
Q 000355 327 L 327 (1620)
Q Consensus 327 ~ 327 (1620)
.
T Consensus 231 ~ 231 (334)
T cd05100 231 T 231 (334)
T ss_pred h
Confidence 3
No 449
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.90 E-value=6.1e-22 Score=248.16 Aligned_cols=283 Identities=15% Similarity=0.148 Sum_probs=224.1
Q ss_pred ccCCC-ceec--cCCCCCCCCCCeEEEEc--CCCCEEEEeCC-------------CceeEEeecccCcEEEEEEccCCCE
Q 000355 1222 MKCEP-WFWF--PTPAASWDGPDFLGRVG--GLKDESPWKIK-------------ASILSSIRAHHGALRSVAVGQDECT 1283 (1620)
Q Consensus 1222 ~gH~~-~V~~--~Spdg~~~~~~~lasgS--~D~~i~lWd~~-------------g~~l~tl~gH~~~V~svafspdg~~ 1283 (1620)
.+|.+ .|.+ .+|||.. +|||| .|+.+++|+.+ .+.+.+...|.+.|+||.|++||++
T Consensus 9 v~H~~~~IfSIdv~pdg~~-----~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~ 83 (942)
T KOG0973|consen 9 VNHNEKSIFSIDVHPDGVK-----FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSY 83 (942)
T ss_pred cccCCeeEEEEEecCCcee-----EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCe
Confidence 34544 3443 8899987 99999 99999999965 1245677789999999999999999
Q ss_pred EEEeccCCCCCcEEEEEeCCC------------------CeEEEEEecCCcceeEEEEeeCCCeEEEe--CCcEEEEeCC
Q 000355 1284 VFTAGIGPGFKGTVQKWELTR------------------INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ 1343 (1620)
Q Consensus 1284 LaSgs~d~~~DgtVrLWdl~t------------------g~~l~~l~gH~~~V~sV~f~~~~~~laS~--DgtV~IWD~~ 1343 (1620)
||+||. |+.|.||.... .++...+.||...|.+|+|+|++.+++|+ |++|.|||..
T Consensus 84 lAsGSD----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~ 159 (942)
T KOG0973|consen 84 LASGSD----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK 159 (942)
T ss_pred EeeccC----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc
Confidence 999997 89999998762 14788899999999999999999999776 9999999999
Q ss_pred CCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEE
Q 000355 1344 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFID 1423 (1620)
Q Consensus 1344 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwD 1423 (1620)
+.+++.++.+|.. . |-.+.|.|-|+++++-+.|++|++|+
T Consensus 160 tF~~~~vl~~H~s------------------------------~----------VKGvs~DP~Gky~ASqsdDrtikvwr 199 (942)
T KOG0973|consen 160 TFELLKVLRGHQS------------------------------L----------VKGVSWDPIGKYFASQSDDRTLKVWR 199 (942)
T ss_pred cceeeeeeecccc------------------------------c----------ccceEECCccCeeeeecCCceEEEEE
Confidence 9999999987642 2 33444555699999999999999999
Q ss_pred CCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEec----CCcEEEEECCCCcEEEEEEccCCcE
Q 000355 1424 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS----SGQCRLFDVRSGNVIASWRAHDGYV 1499 (1620)
Q Consensus 1424 l~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~----Dg~I~lwD~~tg~~i~~l~gH~~~V 1499 (1620)
+.+..+.+.+.++-....-. .-|.-.+|+|||.+|+++.. -.++.|.+-.+-+.-..+-||..++
T Consensus 200 t~dw~i~k~It~pf~~~~~~-----------T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~ 268 (942)
T KOG0973|consen 200 TSDWGIEKSITKPFEESPLT-----------TFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPV 268 (942)
T ss_pred cccceeeEeeccchhhCCCc-----------ceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCce
Confidence 88877777776554322222 22344567799999998753 3468899988888889999999999
Q ss_pred EEEE-eC------CC-------C----EEEEEeCCCcEEEEECCCCCCCCCeEe-ecCCCCEE--EEeecCCEEEEEeCC
Q 000355 1500 TKLA-AP------ED-------H----LLVSSSLDKTLRIWDLRRNWPSQPTVF-KGHTNGIS--GFSVWGQDVISISNN 1558 (1620)
Q Consensus 1500 ~sva-sp------dg-------~----~LaSgS~DgtI~IWDl~~~~~~~~~~l-~gH~~~V~--afSpdg~~LaSgs~D 1558 (1620)
.++. .| .. . .+|+||.|++|.||..... +++... .-...+|. +|+|||-.|..+|.|
T Consensus 269 evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~--RPl~vi~~lf~~SI~DmsWspdG~~LfacS~D 346 (942)
T KOG0973|consen 269 EVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP--RPLFVIHNLFNKSIVDMSWSPDGFSLFACSLD 346 (942)
T ss_pred EEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC--CchhhhhhhhcCceeeeeEcCCCCeEEEEecC
Confidence 9998 54 11 1 6789999999999998665 333322 22334566 599999999999999
Q ss_pred c-eEEEecc
Q 000355 1559 K-IGLSSLS 1566 (1620)
Q Consensus 1559 ~-I~vwdl~ 1566 (1620)
| |.+..++
T Consensus 347 GtV~~i~Fe 355 (942)
T KOG0973|consen 347 GTVALIHFE 355 (942)
T ss_pred CeEEEEEcc
Confidence 9 9999986
No 450
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.89 E-value=8.8e-24 Score=255.78 Aligned_cols=229 Identities=14% Similarity=0.178 Sum_probs=189.1
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceee
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 184 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~ 184 (1620)
.-++.++||.|.||+|++|+-+... +....||||.++.+ ...+...+|+ .|..||.+++||||++|.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pg---kre~~VAIKTLK~G-ytekqrrdFL--------~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPG---KREITVAIKTLKAG-YTEKQRRDFL--------SEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred heEEEEEEecccccceecccccCCC---CcceeEEEeeeccC-ccHHHHhhhh--------hhhhhcccCCCCcEEEEEE
Confidence 4567899999999999999864432 45688999999875 4455566777 8999999999999999999
Q ss_pred EEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEee
Q 000355 185 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 263 (1620)
Q Consensus 185 ~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~D 263 (1620)
+......+.||.|||+ |+|..+|+.+ .+.++.-+..-+++.|+.|++||-+.|+|||||...|||++.+. .+|++|
T Consensus 698 VVTks~PvMIiTEyMENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL--vCKVsD 774 (996)
T KOG0196|consen 698 VVTKSKPVMIITEYMENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL--VCKVSD 774 (996)
T ss_pred EEecCceeEEEhhhhhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce--EEEecc
Confidence 9999999999999999 7999999964 46688888888999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccCCCCCCccceeccccc--CccchhhhcccccccccccccccccccchHHHHhhhhcccCCCCCCCc
Q 000355 264 KPLVGFNSIADWCTIPTSPMIGCCIEGCSS--QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYT 341 (1620)
Q Consensus 264 FGla~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~~dl~ 341 (1620)
||++|...+.... .... -|| ...|.|||.+.-..++.++|.|+.|.+. + ..-.|.-|+|.|++
T Consensus 775 FGLSRvledd~~~---~ytt-------~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVm-W----EVmSyGERPYWdmS 839 (996)
T KOG0196|consen 775 FGLSRVLEDDPEA---AYTT-------LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM-W----EVMSYGERPYWDMS 839 (996)
T ss_pred ccceeecccCCCc---cccc-------cCCccceeecChhHhhhcccCchhhccccceEE-E----EecccCCCcccccc
Confidence 9999965433211 1111 112 2459999999999999999999999653 2 23457789999999
Q ss_pred CCcccceee-ccCCCCCCCCCCC
Q 000355 342 FHMVMPWVI-DFSTKPDENFDSG 363 (1620)
Q Consensus 342 q~pv~pwv~-d~~~~~~~~~~~~ 363 (1620)
..-|+.-|- +|-.+++-+.|..
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~a 862 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAA 862 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHH
Confidence 999999998 7877777777654
No 451
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.89 E-value=4.6e-23 Score=238.20 Aligned_cols=194 Identities=20% Similarity=0.160 Sum_probs=156.1
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|.+.... ..+..+|+|.+....... ....+. +|+++++.++|+||+++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~---~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD---GKTTEVAVKTLKEDASEE-ERKDFL--------KEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEecCC---CCCceEEeEeeccccchh-HHHHHH--------HHHHHHhhcCCCChheeeeeecCC
Confidence 47999999999999973211 337889999987643322 233444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 190 GLITSVIPKTP-YTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
..+++||||++ ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~--~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC--cEEE
Confidence 99999999996 69999998431 36789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||.++......... ......++..|+|||.+....++.++|+|+.|.+. |+++.
T Consensus 147 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~~l~~ 202 (262)
T cd00192 147 SDFGLSRDVYDDDYYR---------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL-WEIFT 202 (262)
T ss_pred cccccccccccccccc---------cccCCCcCccccCHHHhccCCcchhhccHHHHHHH-HHHHh
Confidence 9999998543221100 01122357789999999888999999999999776 55543
No 452
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.89 E-value=3.6e-23 Score=242.17 Aligned_cols=197 Identities=16% Similarity=0.107 Sum_probs=156.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++++.||+|+||.||+|+..... ...+.+.+++|.+..... ......+. +|++++++++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~ 73 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIE-EEGGETLVLVKALQKTKD-ENLQSEFR--------RELDMFRKLSHKNVVRL 73 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCC-cCCCcceEEEEccCCccc-hHHHHHHH--------HHHHHHHhcCCcceeee
Confidence 367999999999999999999963322 123457899998865321 11233444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPN-------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++...+..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 74 LGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred EEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC
Confidence 999999899999999999 599999985331 158899999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
+ .+||+|||+++........ . .....++..|+|||.+.+..++...|+|+.|.+.
T Consensus 154 ~--~~~l~~~~~~~~~~~~~~~-----~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 154 R--EVKVSLLSLSKDVYNSEYY-----K-----LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred C--cEEEcccccccccCccccc-----c-----cCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 8 8999999998743211000 0 0111245679999998888889999999999765
No 453
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.89 E-value=5.4e-22 Score=225.58 Aligned_cols=278 Identities=15% Similarity=0.238 Sum_probs=217.2
Q ss_pred CcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCce
Q 000355 1270 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL 1347 (1620)
Q Consensus 1270 ~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~ 1347 (1620)
..+.++...+....++|||. |+++.++|..+++.+.+|+||...|+++.|+++...+ +|.|..|+||......+
T Consensus 220 pgi~ald~~~s~~~ilTGG~----d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~ 295 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGE----DKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE 295 (506)
T ss_pred CCeeEEeecCCCCcceecCC----CCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC
Confidence 45677777777778999998 8999999999999999999999999999999988777 67799999999876554
Q ss_pred EEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCC
Q 000355 1348 LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1427 (1620)
Q Consensus 1348 i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg 1427 (1620)
......| ...|+.+..+|.|+++++++.||+.-+.|+++|
T Consensus 296 ~~~~~~h----------------------------------------~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g 335 (506)
T KOG0289|consen 296 PTSSRPH----------------------------------------EEPVTGLSLHPTGEYLLSASNDGTWAFSDISSG 335 (506)
T ss_pred ccccccc----------------------------------------cccceeeeeccCCcEEEEecCCceEEEEEccCC
Confidence 3333322 223667777788999999999999999999999
Q ss_pred ceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCC
Q 000355 1428 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APE 1506 (1620)
Q Consensus 1428 ~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spd 1506 (1620)
..+.........+ .+++.+|+ |||.++++|..||.|++||+.++..+..|.+|.++|.+|+ +.|
T Consensus 336 ~~lt~vs~~~s~v----~~ts~~fH-----------pDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsEN 400 (506)
T KOG0289|consen 336 SQLTVVSDETSDV----EYTSAAFH-----------PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSEN 400 (506)
T ss_pred cEEEEEeeccccc----eeEEeeEc-----------CCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccC
Confidence 9887665432222 25556654 7778999999999999999999999999999999999999 999
Q ss_pred CCEEEEEeCCCcEEEEECCCCCCCCCeEeecCC-CCEE--EEeecCCEEEEEeCCceEEEeccCCCCCCCcceeecccee
Q 000355 1507 DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHT-NGIS--GFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLY 1583 (1620)
Q Consensus 1507 g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~-~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~~~~g~~~~~~~kl~ 1583 (1620)
|-+||++++|+.|++||+|..+ ...++.-.. .+|. +|...|++|+.++.| |+||-..+... ..+++.
T Consensus 401 GY~Lat~add~~V~lwDLRKl~--n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~-l~Vy~~~k~~k-------~W~~~~ 470 (506)
T KOG0289|consen 401 GYWLATAADDGSVKLWDLRKLK--NFKTIQLDEKKEVNSLSFDQSGTYLGIAGSD-LQVYICKKKTK-------SWTEIK 470 (506)
T ss_pred ceEEEEEecCCeEEEEEehhhc--ccceeeccccccceeEEEcCCCCeEEeecce-eEEEEEecccc-------cceeee
Confidence 9999999999999999999873 333333222 2455 477789999999555 44444331111 111111
Q ss_pred eecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1584 MVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1584 ~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
. -..|.+..+.+.|.-+.+++++||.|..++++
T Consensus 471 ~---~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 471 E---LADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred h---hhhcccccceeeecccceEEeeccchhheEEe
Confidence 1 12466788999999999999999999999886
No 454
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.89 E-value=4.5e-23 Score=240.83 Aligned_cols=192 Identities=15% Similarity=0.094 Sum_probs=145.5
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||++.... ......+++|.+.... .......+. +|+.+++.++||||+++++.+...
T Consensus 1 ~~lg~G~~g~v~~~~~~~----~~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~~~~~~~~ 67 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYT----DTGVARVVVKELKANA-SSKEQNEFL--------QQGDPYRILQHPNILQCLGQCVEA 67 (268)
T ss_pred CcCCCCcCceEEEEEEEc----CCCcceEEEEEecCCC-ChHHHHHHH--------HHHHHHhccCCcchhheEEEecCC
Confidence 369999999999987411 1234567778776532 223334455 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCC
Q 000355 190 GLITSVIPKTP-YTLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 266 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGl 266 (1620)
...|+||||++ |+|.+++.... ....++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~--~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL--TVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc--cEEeccccc
Confidence 99999999999 59999997432 23456667788999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccCCCCCCccceecccccCccchhhhcccc-------cccccccccccccccchHHHH
Q 000355 267 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 267 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-------~~y~~~~d~W~~G~isnfeyL 326 (1620)
++.......... .....++..|+|||++.. ..++.++|+|+.|.+. |+++
T Consensus 146 ~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l-~el~ 202 (268)
T cd05086 146 GPSRYKEDYIET---------EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL-WELF 202 (268)
T ss_pred ccccCcchhhhc---------ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHH-HHHH
Confidence 873221110000 011225678999998753 3457789999999775 5554
No 455
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.89 E-value=2.9e-23 Score=241.71 Aligned_cols=190 Identities=16% Similarity=0.162 Sum_probs=145.8
Q ss_pred eceeeeeeEEEEEEEecccc------cccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 110 AFIGICSYSIFEELASNFLS------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~------~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.||+|+||.||+|+..... ........+++|.+.... ......+. +|+.+++.++||||++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFF--------ETASMMRQVSHKHIVLLY 70 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46999999999999842211 011234568888875432 12222333 789999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-----e
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----S 257 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-----~ 257 (1620)
+++..+...++||||+++ +|..++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++. .
T Consensus 71 ~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 71 GVCVRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEEecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 999999999999999995 78777763 3456899999999999999999999999999999999999986651 1
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc-ccccccccccccccccchHHHH
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~-~~~y~~~~d~W~~G~isnfeyL 326 (1620)
.+|++|||++..... ...+.++..|||||.+. +..++.++|+|+.|++. |+++
T Consensus 150 ~~~l~d~g~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~el~ 203 (262)
T cd05077 150 FIKLSDPGIPITVLS---------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTL-WEIC 203 (262)
T ss_pred eeEeCCCCCCccccC---------------cccccccccccChhhhcCCCCCCchhHHHHHHHHH-HHHH
Confidence 389999999874321 11234677899999876 56789999999999765 4443
No 456
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.89 E-value=4e-23 Score=243.67 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=158.1
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+... ....++..+|+|.+... .......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~aiK~~~~~-~~~~~~~~~~--------~ei~~l~~l~h~~iv~~ 73 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGL-LPYEPFTMVAVKMLKEE-ASADMQADFQ--------REAALMAEFDHPNIVKL 73 (288)
T ss_pred hHhceecccccccccccEEEEEEccc-CCCCcceeEEEEecCCC-cCHHHHHHHH--------HHHHHHHhcCCCchheE
Confidence 45799999999999999999986321 01235678999998753 2223334444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 241 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 241 (1620)
++++..++..++||||++ |+|.+++.... ...+++..+..++.||+.||.|||++|++|
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 74 LGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 999999999999999999 59999997321 124677888999999999999999999999
Q ss_pred cCCCCCceEecCCCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 242 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 242 RDLKP~NILl~~~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|||||+|||++.++ .+||+|||+++......... .......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 154 ~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 222 (288)
T cd05050 154 RDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 222 (288)
T ss_pred ccccHhheEecCCC--ceEECccccceecccCcccc---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHH
Confidence 99999999999998 89999999987432111000 00111234569999999888999999999999876
Q ss_pred hHHHH
Q 000355 322 NFEYL 326 (1620)
Q Consensus 322 nfeyL 326 (1620)
|+++
T Consensus 223 -~el~ 226 (288)
T cd05050 223 -WEIF 226 (288)
T ss_pred -HHHH
Confidence 5544
No 457
>PTZ00420 coronin; Provisional
Probab=99.89 E-value=3.7e-21 Score=241.00 Aligned_cols=246 Identities=16% Similarity=0.171 Sum_probs=177.3
Q ss_pred CcEEEEEeCCCCeEEEEEecCCcceeEEEEeeC-CCeEEE--eCCcEEEEeCCCCce-EEEEeccCCccccccCCCCCcc
Q 000355 1294 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSS-SGRIAS--CDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSIS 1369 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~-~~~laS--~DgtV~IWD~~tg~~-i~~l~~~~~~~~~~~s~s~~~~ 1369 (1620)
++.|++|+..+...+..+.+|.+.|.+++|+|+ +..++| .||+|+|||+.++.. ...+..
T Consensus 53 ~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~---------------- 116 (568)
T PTZ00420 53 IGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKD---------------- 116 (568)
T ss_pred eeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccccc----------------
Confidence 899999999888889999999999999999997 566644 499999999986532 111100
Q ss_pred cccccccccccccCCCCCeEEEeecCCceEEEEEecCCCE-EEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccce
Q 000355 1370 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1448 (1620)
Q Consensus 1370 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~-lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~s 1448 (1620)
.+..+.-+...|++++|+|++.. +++|+.|++|++||+++++.+..+.. ...|.+
T Consensus 117 -----------------p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------~~~V~S 172 (568)
T PTZ00420 117 -----------------PQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------PKKLSS 172 (568)
T ss_pred -----------------ceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------CCcEEE
Confidence 00011112233666777777765 56899999999999999987766642 234788
Q ss_pred EeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE------eCCCCEEEEEeCCC----c
Q 000355 1449 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA------APEDHLLVSSSLDK----T 1518 (1620)
Q Consensus 1449 va~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva------spdg~~LaSgS~Dg----t 1518 (1620)
++|+ ++|.+|++++.|+.|++||+++++.+.++.+|.+.+.+.. ++++.+++|++.|+ +
T Consensus 173 lsws-----------pdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~ 241 (568)
T PTZ00420 173 LKWN-----------IKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMRE 241 (568)
T ss_pred EEEC-----------CCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccE
Confidence 8875 6778999999999999999999999999999998754433 37888999988775 7
Q ss_pred EEEEECCCCCCCCCeE--eecCCCCEE-EE-eecCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccc
Q 000355 1519 LRIWDLRRNWPSQPTV--FKGHTNGIS-GF-SVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLS 1593 (1620)
Q Consensus 1519 I~IWDl~~~~~~~~~~--l~gH~~~V~-af-Spdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~ 1593 (1620)
|+|||+++.. ..+.. +..+.+.+. .+ .++|.++++|+.|+ |++|++.. +.. ..+ ... .+..
T Consensus 242 VkLWDlr~~~-~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~-----~~~----~~l---~~~-~s~~ 307 (568)
T PTZ00420 242 MKLWDLKNTT-SALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSL-----GSI----RKV---NEY-KSCS 307 (568)
T ss_pred EEEEECCCCC-CceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccC-----CcE----Eee---ccc-ccCC
Confidence 9999999632 33333 334444443 23 34588999999999 99999862 211 111 111 3556
Q ss_pred cEEEEEEecCC
Q 000355 1594 VLSSISILPFS 1604 (1620)
Q Consensus 1594 ~V~svafsPdg 1604 (1620)
++.+++|.|..
T Consensus 308 p~~g~~f~Pkr 318 (568)
T PTZ00420 308 PFRSFGFLPKQ 318 (568)
T ss_pred CccceEEcccc
Confidence 78889999864
No 458
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.89 E-value=5.5e-23 Score=237.76 Aligned_cols=191 Identities=18% Similarity=0.209 Sum_probs=154.9
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||++.+ ..+..+|+|.+....... .++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~-------~~~~~~~~k~~~~~~~~~---~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYW-------LEKRKVAIKTIREGAMSE---EDFI--------EEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEE-------eCCCeEEEEECCCCCCCH---HHHH--------HHHHHHHhCCCCCeeeEE
Confidence 4789999999999999999985 235679999987543322 2344 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEe
Q 000355 184 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 262 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~ 262 (1620)
+++......++||||+++ +|.+++.. ....+++..++.++.|++.||.|||+++++||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~--~~~l~ 142 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVS 142 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC--eEEEC
Confidence 999999999999999985 99999874 234578889999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 263 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 263 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|||+++....... .. .....++..|+|||.+.+..++.++|+|+.|.+. |+++
T Consensus 143 d~g~~~~~~~~~~-----~~-----~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l-~el~ 195 (256)
T cd05112 143 DFGMTRFVLDDQY-----TS-----STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLM-WEVF 195 (256)
T ss_pred CCcceeecccCcc-----cc-----cCCCccchhhcCHhHhccCCcChHHHHHHHHHHH-HHHH
Confidence 9999884321100 00 0111235679999999988899999999999765 4443
No 459
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.89 E-value=5.3e-23 Score=238.33 Aligned_cols=191 Identities=19% Similarity=0.156 Sum_probs=149.7
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
++||+|+||.||+|...... ..+..+|+|.+...... ....++. +|+++++.++||||+++++++. .
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~---~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~-~ 67 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKS---GKEVEVAVKTLKQEHIA-AGKKEFL--------REASVMAQLDHPCIVRLIGVCK-G 67 (257)
T ss_pred CccCccCceeEEEeEeeccC---CCcceEEEEecccccch-HHHHHHH--------HHHHHHHhcCCCCeeeEEEEEc-C
Confidence 47999999999999852211 23478999998765433 2333444 8999999999999999999876 4
Q ss_pred CEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~--~~kl~df~~~~ 143 (257)
T cd05060 68 EPLMLVMELAPLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH--QAKISDFGMSR 143 (257)
T ss_pred CceEEEEEeCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--cEEeccccccc
Confidence 56899999998 599999983 44688999999999999999999999999999999999999999 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
......... . ......++..|+|||.+.+..++.++|+|+.|.+. |+.+
T Consensus 144 ~~~~~~~~~--~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~~~~ 192 (257)
T cd05060 144 ALGAGSDYY--R------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTL-WEAF 192 (257)
T ss_pred eeecCCccc--c------cccCccccccccCHHHhcCCCCCccchHHHHHHHH-HHHH
Confidence 543211100 0 00111134579999999988999999999999665 4444
No 460
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.3e-23 Score=267.61 Aligned_cols=218 Identities=18% Similarity=0.173 Sum_probs=170.1
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
+.-++.+.||+|+||+||.|.-.-..+... -..||||.+++. ...+...+|+ +|..+|++++|||||+++
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~-~~~~~~~~Fl--------~Ea~~m~~f~HpNiv~li 761 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRL-SSEQEVSDFL--------KEALLMSKFDHPNIVSLI 761 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEecccc-CCHHHHHHHH--------HHHHHHhcCCCcceeeEE
Confidence 356788999999999999998532222111 456899999774 3455666777 899999999999999999
Q ss_pred eEEEeCCEEEEEEeCCC-CCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCce
Q 000355 184 GLLKTSGLITSVIPKTP-YTLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 184 ~~~~~~~~~~lV~E~~~-g~L~~~l~~~~-----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~ 257 (1620)
|++.+....+|++|||. |||..+|+..+ ...++..+...++.||++|+.||+++++|||||...|+||+...
T Consensus 762 Gv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r-- 839 (1025)
T KOG1095|consen 762 GVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR-- 839 (1025)
T ss_pred EeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC--
Confidence 99999999999999999 59999999641 45678999999999999999999999999999999999999998
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
.+||+|||+||..-...........+ =..-|||||.+....++.++|+|+.|.+. ||.+. ++.-+|
T Consensus 840 ~VKIaDFGlArDiy~~~yyr~~~~a~---------lPvkWm~PEsl~d~iFtskSDvWsFGVll-WEifs----lG~~PY 905 (1025)
T KOG1095|consen 840 VVKIADFGLARDIYDKDYYRKHGEAM---------LPVKWMPPESLKDGIFTSKSDVWSFGVLL-WEIFS----LGATPY 905 (1025)
T ss_pred cEEEcccchhHhhhhchheeccCccc---------cceecCCHHHHhhcccccccchhhhHHHH-HHHHh----CCCCCC
Confidence 99999999999432211110000000 12459999999999999999999999765 55543 344456
Q ss_pred CCCcCCcccc
Q 000355 338 GDYTFHMVMP 347 (1620)
Q Consensus 338 ~dl~q~pv~p 347 (1620)
.+.++.-|+-
T Consensus 906 ~~~~n~~v~~ 915 (1025)
T KOG1095|consen 906 PSRSNFEVLL 915 (1025)
T ss_pred CCcchHHHHH
Confidence 6666655555
No 461
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.89 E-value=2.9e-23 Score=243.39 Aligned_cols=188 Identities=15% Similarity=0.109 Sum_probs=144.4
Q ss_pred ceeeeeeEEEEEEEeccccc------------------ccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc
Q 000355 111 FIGICSYSIFEELASNFLSG------------------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 172 (1620)
Q Consensus 111 ~LG~G~fG~Vy~a~~~~~~~------------------~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~ 172 (1620)
.||+|+||.||+|......+ .......||+|.+.... ......+. +|+.+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~~~ 71 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFF--------ETASLMS 71 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHH--------HHHHHHh
Confidence 69999999999987432110 11223568899886432 22223344 7899999
Q ss_pred cCCcccccceeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEe
Q 000355 173 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 251 (1620)
Q Consensus 173 ~l~HpNIv~l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 251 (1620)
.++||||+++++++..++..++||||+++ +|..++.. ..+.+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 72 ~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 72 QVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred cCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 99999999999999999999999999995 88888863 34567888899999999999999999999999999999999
Q ss_pred cCCCc-----eEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccchHHH
Q 000355 252 TDSCW-----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEY 325 (1620)
Q Consensus 252 ~~~~~-----~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~isnfey 325 (1620)
+..+. ..+|++|||+++..... . ...++..|+|||.+.+ ..++..+|+|+.|.+. |+.
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~--------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l-~el 214 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR-------E--------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTL-LEI 214 (274)
T ss_pred eccCcccCccceeeecCCccccccccc-------c--------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHH-HHH
Confidence 86531 24899999998732111 0 1125667999998765 5689999999999765 443
No 462
>PTZ00421 coronin; Provisional
Probab=99.89 E-value=3e-21 Score=241.02 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=176.2
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE-------------EEEecCCcceeEEEEee-CCCeEE--
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV-------------SGYYGHEEVVNDICVLS-SSGRIA-- 1331 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l-------------~~l~gH~~~V~sV~f~~-~~~~la-- 1331 (1620)
|-..|+....++|+..+++++. +..+..|+...+..+ ..+.||++.|++++|+| ++..++
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~----~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSg 94 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACND----RFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTA 94 (493)
T ss_pred ceeccccccccCCCCCcEeECC----ceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEE
Confidence 4456777778888777788775 677778886554332 14679999999999999 666774
Q ss_pred EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC-CEE
Q 000355 1332 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERL 1410 (1620)
Q Consensus 1332 S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg-~~l 1410 (1620)
|.|++|++||+.++....... ........|... |.+++|+|++ +.+
T Consensus 95 S~DgtIkIWdi~~~~~~~~~~-----------------------~~l~~L~gH~~~----------V~~l~f~P~~~~iL 141 (493)
T PTZ00421 95 SEDGTIMGWGIPEEGLTQNIS-----------------------DPIVHLQGHTKK----------VGIVSFHPSAMNVL 141 (493)
T ss_pred eCCCEEEEEecCCCccccccC-----------------------cceEEecCCCCc----------EEEEEeCcCCCCEE
Confidence 449999999997653211000 000011123333 4555566654 689
Q ss_pred EEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEE
Q 000355 1411 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1490 (1620)
Q Consensus 1411 asgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~ 1490 (1620)
++|+.|++|++||+++++.+..+.+|. ..|.+++|+ ++|++|++|+.||+|++||+++++.+.
T Consensus 142 aSgs~DgtVrIWDl~tg~~~~~l~~h~------~~V~sla~s-----------pdG~lLatgs~Dg~IrIwD~rsg~~v~ 204 (493)
T PTZ00421 142 ASAGADMVVNVWDVERGKAVEVIKCHS------DQITSLEWN-----------LDGSLLCTTSKDKKLNIIDPRDGTIVS 204 (493)
T ss_pred EEEeCCCEEEEEECCCCeEEEEEcCCC------CceEEEEEE-----------CCCCEEEEecCCCEEEEEECCCCcEEE
Confidence 999999999999999999888887654 458888886 567899999999999999999999999
Q ss_pred EEEccCCcEE-EEE-eCCCCEEEEEe----CCCcEEEEECCCCCCCCCeEeecCCC-CEE--EEeecCCEEEEEe-CCc-
Q 000355 1491 SWRAHDGYVT-KLA-APEDHLLVSSS----LDKTLRIWDLRRNWPSQPTVFKGHTN-GIS--GFSVWGQDVISIS-NNK- 1559 (1620)
Q Consensus 1491 ~l~gH~~~V~-sva-spdg~~LaSgS----~DgtI~IWDl~~~~~~~~~~l~gH~~-~V~--afSpdg~~LaSgs-~D~- 1559 (1620)
.+.+|.+.+. .+. .+++..+++++ .|++|++||+++.. ........+.. .+. .|+++++.|++|+ .|+
T Consensus 205 tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~ 283 (493)
T PTZ00421 205 SVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-SPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGN 283 (493)
T ss_pred EEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-CceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCe
Confidence 9999987543 334 66767776654 47999999998753 23333333333 333 4889999999887 488
Q ss_pred eEEEecc
Q 000355 1560 IGLSSLS 1566 (1620)
Q Consensus 1560 I~vwdl~ 1566 (1620)
|++||+.
T Consensus 284 Iriwdl~ 290 (493)
T PTZ00421 284 IRCFELM 290 (493)
T ss_pred EEEEEee
Confidence 9999986
No 463
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.89 E-value=6.1e-24 Score=230.15 Aligned_cols=211 Identities=16% Similarity=0.163 Sum_probs=161.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.++.+.+..||.|+.|.|++++. ..+|.+.|||.+.+.. ..++.++.+ ..+.++.+. ..|+||+
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~------rs~~~iiAVK~M~rt~-Nkee~kRIL--------mDldvv~~s~dcpyIV~ 155 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRF------RSTGHIIAVKQMRRTG-NKEENKRIL--------MDLDVVLKSHDCPYIVQ 155 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEE------cccceEEEEEeecccC-CHHHHHHHH--------HhhhHHhhccCCCeeee
Confidence 34667788999999999999986 2568999999998753 334444444 677766554 4799999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
.+|+|.++..+++.||.|...++.+++.. .+.++|..+-.+..-+++||.||.+ +||||||+||+|||+|+.| ++|
T Consensus 156 c~GyFi~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G--niK 232 (391)
T KOG0983|consen 156 CFGYFITNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--NIK 232 (391)
T ss_pred eeeEEeeCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC--CEE
Confidence 99999999999999999987777777753 4568999999999999999999987 6999999999999999999 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc---ccccccccccccccccchHHHHhhhhcccCCCC
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 337 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~---~~~y~~~~d~W~~G~isnfeyL~~ln~~~gRs~ 337 (1620)
+||||++....... +..+ .. |-+.|||||.+. ...|+-..|+|+.| ++..+...|+..
T Consensus 233 lCDFGIsGrlvdSk-----Ahtr----sA---GC~~YMaPERidp~~~~kYDiRaDVWSlG-------ITlveLaTg~yP 293 (391)
T KOG0983|consen 233 LCDFGISGRLVDSK-----AHTR----SA---GCAAYMAPERIDPPDKPKYDIRADVWSLG-------ITLVELATGQYP 293 (391)
T ss_pred eecccccceeeccc-----cccc----cc---CCccccCccccCCCCCCccchhhhhhhhc-------cchhhhhcccCC
Confidence 99999998654321 1111 22 345799999875 45789999999999 445555556543
Q ss_pred CCC--cCCcccceee
Q 000355 338 GDY--TFHMVMPWVI 350 (1620)
Q Consensus 338 ~dl--~q~pv~pwv~ 350 (1620)
... +.+-++--|+
T Consensus 294 y~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVL 308 (391)
T ss_pred CCCCCccHHHHHHHH
Confidence 333 3334444444
No 464
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=6e-21 Score=200.03 Aligned_cols=276 Identities=19% Similarity=0.257 Sum_probs=217.5
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCC-------C------c---eeEEeecccCcEEEEEEccCCCEEEEeccCCCC
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIK-------A------S---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1293 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~-------g------~---~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~ 1293 (1620)
+|.|.|.+ .|.||..++.|+.... + . ..+.-+.|.++|.|++|||+|+++++||.
T Consensus 39 ~fhp~g~l-----yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn---- 109 (350)
T KOG0641|consen 39 AFHPAGGL-----YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN---- 109 (350)
T ss_pred EecCCCce-----EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC----
Confidence 48999987 8999999999876521 1 0 12344679999999999999999999998
Q ss_pred CcEEEEEeCCCCeEE-----EEEecCCcceeEEEEeeC---CC-eEEEe---CCcEEEEeCCCCceEEEEeccCCccccc
Q 000355 1294 KGTVQKWELTRINCV-----SGYYGHEEVVNDICVLSS---SG-RIASC---DGTLHVWNSQTGKLLSVFAEQSMDSLHG 1361 (1620)
Q Consensus 1294 DgtVrLWdl~tg~~l-----~~l~gH~~~V~sV~f~~~---~~-~laS~---DgtV~IWD~~tg~~i~~l~~~~~~~~~~ 1361 (1620)
|++|++--.....|. ..|.-|.+.|..++|..+ ++ .++|. |..|.+-|..+|+..+.+.+|.
T Consensus 110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sght------ 183 (350)
T KOG0641|consen 110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHT------ 183 (350)
T ss_pred CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCc------
Confidence 899999766544432 346779999999999653 33 34554 8889999999999888777653
Q ss_pred cCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccc
Q 000355 1362 GSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1441 (1620)
Q Consensus 1362 ~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~ 1441 (1620)
+.|.++ ++-+|-.+++|+.|.+||+||++-..++.++...-...+
T Consensus 184 ------------------------ghilal-----------yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 184 ------------------------GHILAL-----------YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG 228 (350)
T ss_pred ------------------------ccEEEE-----------EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC
Confidence 223332 222466899999999999999999999988764322212
Q ss_pred -cCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcE
Q 000355 1442 -FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTL 1519 (1620)
Q Consensus 1442 -~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI 1519 (1620)
-++.|.+||.. |.|.++++|..|..+.+||+|.|..++.+..|+..|++|. +|...+|++||.|..|
T Consensus 229 lessavaav~vd-----------psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~i 297 (350)
T KOG0641|consen 229 LESSAVAAVAVD-----------PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKI 297 (350)
T ss_pred cccceeEEEEEC-----------CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceE
Confidence 34568888875 6778999999999999999999999999999999999999 9999999999999999
Q ss_pred EEEECCCCCC--CCCeEeecCCCCEE-E-EeecCCEEEEEeCCc-eEEEecc
Q 000355 1520 RIWDLRRNWP--SQPTVFKGHTNGIS-G-FSVWGQDVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1520 ~IWDl~~~~~--~~~~~l~gH~~~V~-a-fSpdg~~LaSgs~D~-I~vwdl~ 1566 (1620)
++-|++.... ..+.....|.+.+. + |.|..--+++.|.|+ +.+|.+.
T Consensus 298 kltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 298 KLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 9999986422 23345567887665 4 889888899999999 9999863
No 465
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.89 E-value=4.7e-23 Score=238.31 Aligned_cols=186 Identities=18% Similarity=0.208 Sum_probs=152.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||++. ..++.+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--------~~~~~~~iK~~~~~~----~~~~~~--------~e~~~l~~~~~~~i~~~ 64 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--------YTGQKVAVKNIKCDV----TAQAFL--------EETAVMTKLHHKNLVRL 64 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--------cCCCceEEEeecCcc----hHHHHH--------HHHHHHHhCCCCCcCeE
Confidence 4679999999999999999876 356789999986421 122333 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++..+ ..++||||++ ++|.+++.......+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||
T Consensus 65 ~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~--~~kl 141 (254)
T cd05083 65 LGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKV 141 (254)
T ss_pred EEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--cEEE
Confidence 9998754 5799999998 4999999865455678999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+|||+++...... . ....+..|+|||.+.+..++...|+|+.|++. |+++
T Consensus 142 ~Dfg~~~~~~~~~-------~-------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l-~el~ 191 (254)
T cd05083 142 SDFGLARVGSMGV-------D-------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLL-WEVF 191 (254)
T ss_pred CCCccceeccccC-------C-------CCCCCceecCHHHhccCCcCchhhHHHHHHHH-HHHH
Confidence 9999998432110 0 01124569999999888999999999999776 5544
No 466
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.89 E-value=1.7e-22 Score=220.37 Aligned_cols=285 Identities=12% Similarity=0.149 Sum_probs=216.8
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-------------C------ceeEEeecccCcEEEEE
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-------------A------SILSSIRAHHGALRSVA 1276 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-------------g------~~l~tl~gH~~~V~sva 1276 (1620)
...+..|+..+-+ ||+||.+ +||||.|-+|+|.|++ | .++++|-.|.+.|+++.
T Consensus 105 t~ylt~HK~~cR~aafs~DG~l-----vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSL-----VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLD 179 (430)
T ss_pred eEEEeecccceeeeeeCCCCcE-----EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccccee
Confidence 4455668887764 9999997 9999999999999965 1 26789999999999999
Q ss_pred EccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEe--cCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEe
Q 000355 1277 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFA 1352 (1620)
Q Consensus 1277 fspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~--gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~ 1352 (1620)
|+|.+++|+||+. |++|+++|.......+.++ .-...|.++.|+|.|.++ ++.--++++||++|-+|...-.
T Consensus 180 FHPre~ILiS~sr----D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan 255 (430)
T KOG0640|consen 180 FHPRETILISGSR----DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN 255 (430)
T ss_pred ecchhheEEeccC----CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC
Confidence 9999999999998 9999999987654333222 245789999999999998 3446799999999988754332
Q ss_pred ccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEE
Q 000355 1353 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL 1432 (1620)
Q Consensus 1353 ~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~ 1432 (1620)
.. ..|++ .++++.+++.|+..++|+.||.|++||--+++|+.+
T Consensus 256 Pd---------------------------~qht~----------ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t 298 (430)
T KOG0640|consen 256 PD---------------------------DQHTG----------AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRT 298 (430)
T ss_pred cc---------------------------ccccc----------ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHH
Confidence 11 01222 267777888899999999999999999999999998
Q ss_pred eeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccC--Cc----EEEEEeCC
Q 000355 1433 WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD--GY----VTKLAAPE 1506 (1620)
Q Consensus 1433 l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~--~~----V~svaspd 1506 (1620)
+....+. +.|.+..|. .+|++|.+.+.|..+++|.+.||.++....|-. +. -.++-...
T Consensus 299 ~~~AH~g----sevcSa~Ft-----------kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNht 363 (430)
T KOG0640|consen 299 IGNAHGG----SEVCSAVFT-----------KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHT 363 (430)
T ss_pred HHhhcCC----ceeeeEEEc-----------cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCc
Confidence 8643331 234444443 567899999999999999999999999887542 11 11222223
Q ss_pred CCEEEEEe-CCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEe
Q 000355 1507 DHLLVSSS-LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1564 (1620)
Q Consensus 1507 g~~LaSgS-~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1564 (1620)
..+++.-. ..+.+..||.++..... ..--||++.|.. -||.+.-+++||+|. +++|-
T Consensus 364 EdyVl~pDEas~slcsWdaRtadr~~-l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 364 EDYVLFPDEASNSLCSWDARTADRVA-LLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred cceEEccccccCceeeccccchhhhh-hcccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 44554433 35679999999974222 234589999986 688999999999999 99996
No 467
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.89 E-value=6.9e-23 Score=241.94 Aligned_cols=197 Identities=15% Similarity=0.119 Sum_probs=155.5
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChh--hHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
.|++.+.||+|+||.||+|++... ..+|..+|+|.+........ ....+. +|+++++.+ +||||++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~---~~~g~~~aiK~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~i~~ 69 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSG---HDSGKLYAMKVLKKATIVQKAKTTEHTR--------TERQVLEHIRQSPFLVT 69 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccC---CCCCceEEEEEeehhhhhhcchHHHHHH--------HHHHHHHhcccCCChhc
Confidence 488899999999999999986321 24688999999875322111 112222 899999999 5899999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.|..+..+|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||++|++||||||+|||++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~k 145 (290)
T cd05613 70 LHYAFQTDTKLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVV 145 (290)
T ss_pred eeeEeecCCeEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999995 99999973 45688999999999999999999999999999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc--cccccccccccccccchHHHHh
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~--~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|+|||+++........ . .....++..|+|||.+.+ ..++..+|+|+.|.+. |+.++
T Consensus 146 l~dfg~~~~~~~~~~~---~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l-~~ll~ 203 (290)
T cd05613 146 LTDFGLSKEFHEDEVE---R-------AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLM-YELLT 203 (290)
T ss_pred EeeCccceeccccccc---c-------cccccCCcccCChhhccCCCCCCCccccHHHHHHHH-HHHhc
Confidence 9999999853211100 0 112236788999998864 3577899999999775 44443
No 468
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.89 E-value=6.7e-23 Score=239.47 Aligned_cols=198 Identities=17% Similarity=0.174 Sum_probs=153.4
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
|++.+.||+|+||.||+|..... ..+++.+|||.+...........++. +|+++++.++||||++++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~~ 69 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSE---DGSFQKVAVKMLKADIFSSSDIEEFL--------REAACMKEFDHPNVIKLIGV 69 (273)
T ss_pred CcchhcccCCCCCCEEeeEeecc---CCCceEEEEEEeccccCChHHHHHHH--------HHHHHHhcCCCCCcceEEEE
Confidence 56788999999999999986322 24578999999976544444445555 89999999999999999998
Q ss_pred EEeCC------EEEEEEeCCC-CCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 186 LKTSG------LITSVIPKTP-YTLENILQFSP----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 186 ~~~~~------~~~lV~E~~~-g~L~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
+...+ ..++++||+. |+|.+++.... ...++...++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~ 149 (273)
T cd05074 70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN 149 (273)
T ss_pred EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence 86542 3478899998 59988875321 2247888899999999999999999999999999999999998
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+ .+||+|||+++......... .. ....+++.|++||.+.+..++..+|+|+.|++. |+.+
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~-~~--------~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il-~el~ 209 (273)
T cd05074 150 M--TVCVADFGLSKKIYSGDYYR-QG--------CASKLPVKWLALESLADNVYTTHSDVWAFGVTM-WEIM 209 (273)
T ss_pred C--CEEECcccccccccCCccee-cC--------CCccCchhhcCHhHHhcCccchhhhhHHHHHHH-HHHh
Confidence 8 89999999998432111000 00 011234679999999998999999999999776 4444
No 469
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.89 E-value=7.9e-23 Score=236.05 Aligned_cols=197 Identities=21% Similarity=0.188 Sum_probs=156.9
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
+++.+.||+|+||.||+|.+....+ ..+..+|+|.+..... ......+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 69 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG--EKEVEVAVKTLKEDAD-EQQIEEFL--------REARIMRKLDHPNIVKLLGV 69 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC--CCCceEEEEEccCCCC-hHHHHHHH--------HHHHHHHhcCCCchheEEEE
Confidence 3567899999999999999733211 2358899999965422 22333444 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+.+.+..+++|||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 70 ~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--~~~l~df 147 (258)
T smart00219 70 CTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--VVKISDF 147 (258)
T ss_pred EcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC--eEEEccc
Confidence 9999999999999985 999999853333389999999999999999999999999999999999999999 8999999
Q ss_pred CCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 265 Gla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
|+++......... .. .-.++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 148 g~~~~~~~~~~~~--~~--------~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~-~~l~ 198 (258)
T smart00219 148 GLSRDLYDDDYYK--KK--------GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL-WEIF 198 (258)
T ss_pred CCceecccccccc--cc--------cCCCcccccChHHhccCCCCcchhHHHHHHHH-HHHH
Confidence 9998543221110 00 01146789999999888899999999999776 4443
No 470
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.89 E-value=8.6e-23 Score=235.44 Aligned_cols=189 Identities=16% Similarity=0.133 Sum_probs=151.5
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
++||+|+||.||+|.+ .+++.+|+|.+...... .....+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~-------~~~~~v~~K~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVL-------KGNTEVAVKTCRSTLPP-DLKRKFL--------QEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEE-------eCCCcEEEEeccccCCH-HHHHHHH--------HHHHHHHhCCCCCeEEEEEEEecC
Confidence 4799999999999986 23788999998764322 2333444 899999999999999999999999
Q ss_pred CEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCcc
Q 000355 190 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 268 (1620)
Q Consensus 190 ~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla~ 268 (1620)
+..++||||+++ +|.+++... ...++...+..++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~--~~~l~d~g~~~ 141 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC--cEEEeeccccc
Confidence 999999999985 999999742 34578888999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 269 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
........ ... ..-..+..|+|||.+.+..++..+|+|+.|.+. |++++
T Consensus 142 ~~~~~~~~---~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~-~~l~t 190 (251)
T cd05041 142 EEEGGIYT---VSD------GLKQIPIKWTAPEALNYGRYTSESDVWSYGILL-WETFS 190 (251)
T ss_pred cccCCcce---ecc------ccCcceeccCChHhhccCCCCcchhHHHHHHHH-HHHHh
Confidence 43211000 000 001124569999999888999999999999776 55554
No 471
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.89 E-value=7.6e-23 Score=240.09 Aligned_cols=196 Identities=17% Similarity=0.129 Sum_probs=155.7
Q ss_pred CCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCccccccee
Q 000355 104 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 183 (1620)
Q Consensus 104 ~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~ 183 (1620)
.+|++.+.||+|+||.||+|+..... ...+..+|+|.+...... .....+. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~--~~~~~~~avK~~~~~~~~-~~~~~~~--------~ei~~l~~l~~~~i~~~~ 72 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLG--DNTGEQVAVKSLNHSGEE-QHRSDFE--------REIEILRTLDHENIVKYK 72 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCC--CCCceEEEEEEeccccch-HHHHHHH--------HHHHHHHhCCCCChheEE
Confidence 46888899999999999999853221 245789999999764332 2333444 899999999999999999
Q ss_pred eEEEe--CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 184 GLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 184 ~~~~~--~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.. ....++||||+++ +|.+++... ...++...+..++.|++.||+|||++||+||||||+|||++.++ .+|
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~ 149 (284)
T cd05038 73 GVCEKPGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LVK 149 (284)
T ss_pred eeeecCCCCceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEE
Confidence 99887 5589999999984 999999743 33588899999999999999999999999999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccc
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 321 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~is 321 (1620)
|+|||+++............ ....++..|+|||.+.+..++..+|+|+.|++.
T Consensus 150 l~dfg~~~~~~~~~~~~~~~--------~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l 202 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYYVK--------EPGESPIFWYAPECLRTSKFSSASDVWSFGVTL 202 (284)
T ss_pred EcccccccccccCCcceecc--------CCCCCcccccCcHHHccCCCCcccchHHHhhhh
Confidence 99999998543111110000 011234569999999888999999999999665
No 472
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.89 E-value=9.2e-23 Score=236.76 Aligned_cols=194 Identities=19% Similarity=0.195 Sum_probs=148.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEE-e
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK-T 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~-~ 188 (1620)
+.||+|+||.||+|.+... ......+|+|.+.... .......+. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~g~~g~v~~~~~~~~---~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDS---DGQKIHCAVKSLNRIT-DLEEVEQFL--------KEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEecC---CCceEEEEEEecCccC-CHHHHHHHH--------HHHHHHccCCCCCcceEEEEeecC
Confidence 4689999999999985221 1345789999985422 222333444 8999999999999999999775 4
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeecCCc
Q 000355 189 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 267 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DFGla 267 (1620)
++..++||||+. ++|.+++... ....+...+..++.||+.||.|||+++|+||||||+|||++.++ .+||+|||++
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~--~~kl~dfg~~ 145 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF--TVKVADFGLA 145 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEECCcccc
Confidence 556899999998 5999999742 34457778888999999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 268 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+............ .....++..|+|||.+.+..++.++|+|+.|++. |+.+
T Consensus 146 ~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l-~el~ 196 (262)
T cd05058 146 RDIYDKEYYSVHN-------HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL-WELM 196 (262)
T ss_pred ccccCCcceeecc-------cccCcCCccccChhHhccCccchHHHHHHHHHHH-HHHH
Confidence 8432211000000 1122356679999999888999999999999765 4443
No 473
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.89 E-value=6.2e-23 Score=239.85 Aligned_cols=189 Identities=18% Similarity=0.186 Sum_probs=147.2
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccC-CcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|.+... .....+|+|.++.. ........+. +|+++++++ +||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~----~~~~~~~~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~~~~~~ 67 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIINLLGACEH 67 (270)
T ss_pred CcCCCCCCceEEEEEEcCC----CCeeEEEEEEcccc-CCHHHHHHHH--------HHHHHHHhhccCCCeeeEEEEEec
Confidence 3699999999999986211 11235688887642 2222233344 899999999 79999999999999
Q ss_pred CCEEEEEEeCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecC
Q 000355 189 SGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 253 (1620)
Q Consensus 189 ~~~~~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 253 (1620)
.+.+|+||||++ |+|.+++.... ...++...++.++.|++.||+|||++||+||||||+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~ 147 (270)
T cd05047 68 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 147 (270)
T ss_pred CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC
Confidence 999999999998 59999997422 124788899999999999999999999999999999999999
Q ss_pred CCceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 254 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 254 ~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
++ .+||+|||+++...... .. .....+..|+|||++....++.++|+|+.|.+. |+++
T Consensus 148 ~~--~~kl~dfgl~~~~~~~~------~~------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il-~el~ 205 (270)
T cd05047 148 NY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL-WEIV 205 (270)
T ss_pred CC--eEEECCCCCccccchhh------hc------cCCCCccccCChHHHccCCCCchhhHHHHHHHH-HHHH
Confidence 98 89999999986321100 00 011134569999999988999999999999776 5554
No 474
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.89 E-value=1e-22 Score=237.76 Aligned_cols=198 Identities=17% Similarity=0.184 Sum_probs=154.6
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|.+.+.||+|+||.||+|.+.-.. .....+|+|...... .....+.+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~---~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 72 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPE---NEKIAVAVKTCKNCT-SPSVREKFL--------QEAYIMRQFDHPHIVKL 72 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCC---CCCcceEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCchhce
Confidence 356889999999999999999852211 234568999886532 223333444 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++.+ +..++||||++ ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||
T Consensus 73 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l 148 (270)
T cd05056 73 IGVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD--CVKL 148 (270)
T ss_pred eEEEcC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC--CeEE
Confidence 999875 45789999998 5999999742 33578999999999999999999999999999999999999988 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++......... . ..-.++..|+|||.+....++..+|+|+.|.+. |+.++
T Consensus 149 ~d~g~~~~~~~~~~~~--~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il-~el~~ 203 (270)
T cd05056 149 GDFGLSRYLEDESYYK--A--------SKGKLPIKWMAPESINFRRFTSASDVWMFGVCM-WEILM 203 (270)
T ss_pred ccCceeeeccccccee--c--------CCCCccccccChhhhccCCCCchhhhHHHHHHH-HHHHH
Confidence 9999998543221000 0 011134579999999888899999999999776 55553
No 475
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.89 E-value=2.6e-23 Score=241.29 Aligned_cols=191 Identities=16% Similarity=0.131 Sum_probs=146.9
Q ss_pred eceeeeeeEEEEEEEecccccc-cccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEe
Q 000355 110 AFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 188 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~ 188 (1620)
+.||+|+||.||+|.+...... ......+|+|.+... .......+. +|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~~~h~~iv~~~~~~~~ 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFF--------EAASMMSQLSHKHLVLNYGVCVC 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHH--------HHHHHHHhCCCCChhheeeEEEe
Confidence 4699999999999986332110 123456888887542 122223344 89999999999999999999999
Q ss_pred CCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc------eEEEE
Q 000355 189 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW------SWLYI 261 (1620)
Q Consensus 189 ~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~------~~lKL 261 (1620)
++..++||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. ..+|+
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999984 999999742 345788888999999999999999999999999999999987762 13799
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccc-cccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~-~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||++...... ....++..|+|||++.+ ..++..+|+|+.|.+. |+++.
T Consensus 150 ~d~g~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l-~~l~~ 200 (258)
T cd05078 150 SDPGISITVLPK---------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTL-WEIFS 200 (258)
T ss_pred cccccccccCCc---------------hhccccCCccCchhccCCCCCCchhhHHHHHHHH-HHHHc
Confidence 999998732210 11225678999998876 4578899999999776 55543
No 476
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=9e-23 Score=241.40 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=194.5
Q ss_pred ccCcEE---EEEEc-cCCCEEEEeccCCCCCcEEEEEeCCCC------eEEEEEecCCcceeEEEEeeCCCeE--EEeCC
Q 000355 1268 HHGALR---SVAVG-QDECTVFTAGIGPGFKGTVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1335 (1620)
Q Consensus 1268 H~~~V~---svafs-pdg~~LaSgs~d~~~DgtVrLWdl~tg------~~l~~l~gH~~~V~sV~f~~~~~~l--aS~Dg 1335 (1620)
|...|. ++..+ |++++|+|||. ||.|++|+.... .++..++.|.+.|+++....++..+ +|.|-
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGR----Dg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt 95 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGR----DGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT 95 (735)
T ss_pred ccccccchhhccccCCCCceEEecCC----CceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc
Confidence 444555 44444 45678999998 999999997532 2578889999999999988888666 66699
Q ss_pred cEEEEeCCCC--ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEE-ecCCCEEEE
Q 000355 1336 TLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH-IECVERLVV 1412 (1620)
Q Consensus 1336 tV~IWD~~tg--~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~-s~dg~~las 1412 (1620)
||++|+...+ -|+.++..| .++|.|+++ .++...+|+
T Consensus 96 TVK~W~~~~~~~~c~stir~H----------------------------------------~DYVkcla~~ak~~~lvaS 135 (735)
T KOG0308|consen 96 TVKVWNAHKDNTFCMSTIRTH----------------------------------------KDYVKCLAYIAKNNELVAS 135 (735)
T ss_pred eEEEeecccCcchhHhhhhcc----------------------------------------cchheeeeecccCceeEEe
Confidence 9999998766 344444433 245778887 677889999
Q ss_pred EECCCcEEEEECCCC--ceeEEeeCCC---cccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCc
Q 000355 1413 GIGNGSLRFIDINQG--QKLHLWRGEP---TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN 1487 (1620)
Q Consensus 1413 gs~DgtVrlwDl~tg--~~l~~l~~~~---~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~ 1487 (1620)
|+-|+.|.+||+.+| +.+.++.... ...++...|.+++.. +.|..|++|+..+.+++||.++++
T Consensus 136 gGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N-----------~t~t~ivsGgtek~lr~wDprt~~ 204 (735)
T KOG0308|consen 136 GGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN-----------QTGTIIVSGGTEKDLRLWDPRTCK 204 (735)
T ss_pred cCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC-----------CcceEEEecCcccceEEecccccc
Confidence 999999999999988 4444443211 111344556666653 556799999999999999999999
Q ss_pred EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEE
Q 000355 1488 VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLS 1563 (1620)
Q Consensus 1488 ~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vw 1563 (1620)
.+..++||..-|..+. ++||+.++|+|.||+|++||+... +++.++..|.++|.+ .+++=+.+.+|+.|+ |..-
T Consensus 205 kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ--rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~T 282 (735)
T KOG0308|consen 205 KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ--RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRT 282 (735)
T ss_pred ceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc--ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEec
Confidence 9999999999999999 999999999999999999999877 788899999999997 566678899999999 9999
Q ss_pred eccC
Q 000355 1564 SLSK 1567 (1620)
Q Consensus 1564 dl~~ 1567 (1620)
|+..
T Consensus 283 dl~n 286 (735)
T KOG0308|consen 283 DLRN 286 (735)
T ss_pred ccCC
Confidence 9873
No 477
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.89 E-value=1e-22 Score=239.01 Aligned_cols=201 Identities=16% Similarity=0.119 Sum_probs=157.0
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|++.+.||+|+||.||+|.+.... ...+..|++|.+... ........+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~--~~~~~~v~~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 73 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEK--PGKEEEVFVKTVKDH-ASEIQVTLLL--------QESCLLYGLSHQNILPI 73 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCC--CCceeEEEEEEccCC-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 468999999999999999999963211 123678999998643 2223333344 89999999999999999
Q ss_pred eeEEEe-CCEEEEEEeCCC-CCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCC
Q 000355 183 LGLLKT-SGLITSVIPKTP-YTLENILQFSPN------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 183 ~~~~~~-~~~~~lV~E~~~-g~L~~~l~~~~~------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 254 (1620)
++++.. +...++++||++ ++|.+++..... ..+++..+..++.|++.||.|||+++|+||||||+|||++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 74 LHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC
Confidence 998766 467899999998 599999875322 458899999999999999999999999999999999999998
Q ss_pred CceEEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHH
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 255 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL 326 (1620)
+ .+||+|||+++.......... .....++..|+|||++.+..++.++|+|+.|++. |+.+
T Consensus 154 ~--~~kl~d~g~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l-~el~ 213 (280)
T cd05043 154 L--QVKITDNALSRDLFPMDYHCL---------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLL-WELM 213 (280)
T ss_pred C--cEEECCCCCcccccCCceEEe---------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH-HHHh
Confidence 8 899999999984322111000 0112245679999999988999999999999765 4444
No 478
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.89 E-value=7.8e-22 Score=227.70 Aligned_cols=307 Identities=17% Similarity=0.223 Sum_probs=212.4
Q ss_pred EeCCCceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe----EEEEE-ecCCcceeEEEEeeCCCe
Q 000355 1255 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN----CVSGY-YGHEEVVNDICVLSSSGR 1329 (1620)
Q Consensus 1255 Wd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~----~l~~l-~gH~~~V~sV~f~~~~~~ 1329 (1620)
..+.+..-..+++|+..|.++++.|.|..++|||- |.+|+.||..... ..+.+ ..-...|+++.|++.+..
T Consensus 153 ~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~----Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~ 228 (641)
T KOG0772|consen 153 KLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSL----DYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQ 228 (641)
T ss_pred hcCCccceEeccCCceEEEEeeecCCCceeeeccc----cceEEEEecccccccchhhhccCcccccccceeeecCCCCe
Confidence 34456677789999999999999999999999996 9999999986432 11222 234568999999999888
Q ss_pred E--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC
Q 000355 1330 I--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV 1407 (1620)
Q Consensus 1330 l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg 1407 (1620)
+ +|+....+|+|- .|..+..+...... -..+.+-.+|...+.+.+|+|. +.
T Consensus 229 iLvvsg~aqakl~DR-dG~~~~e~~KGDQY-----------------I~Dm~nTKGHia~lt~g~whP~---------~k 281 (641)
T KOG0772|consen 229 ILVVSGSAQAKLLDR-DGFEIVEFSKGDQY-----------------IRDMYNTKGHIAELTCGCWHPD---------NK 281 (641)
T ss_pred EEEEecCcceeEEcc-CCceeeeeeccchh-----------------hhhhhccCCceeeeeccccccC---------cc
Confidence 7 788899999994 46554444321100 0122333345555555555543 35
Q ss_pred CEEEEEECCCcEEEEECCCCc-eeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCC
Q 000355 1408 ERLVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG 1486 (1620)
Q Consensus 1408 ~~lasgs~DgtVrlwDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg 1486 (1620)
..+++++.||++|+||+...+ .+..++..... +-...+++++ |+++|++||+|+.||.|.+||.++.
T Consensus 282 ~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~-g~Rv~~tsC~-----------~nrdg~~iAagc~DGSIQ~W~~~~~ 349 (641)
T KOG0772|consen 282 EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG-GKRVPVTSCA-----------WNRDGKLIAAGCLDGSIQIWDKGSR 349 (641)
T ss_pred cceEEecCCCcEEEEecCCchhheeEEeeccCC-CcccCceeee-----------cCCCcchhhhcccCCceeeeecCCc
Confidence 678999999999999997654 23334322211 1122244444 4478899999999999999998654
Q ss_pred c--E-EEEEEccCC--cEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC----CEEEEeecCCEEEEEe
Q 000355 1487 N--V-IASWRAHDG--YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN----GISGFSVWGQDVISIS 1556 (1620)
Q Consensus 1487 ~--~-i~~l~gH~~--~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~----~V~afSpdg~~LaSgs 1556 (1620)
. + ...-++|.. .|+||. ++||++|+|=|.|+++++||+++.+ +++.+..|-.. .=.||||+.+++++|+
T Consensus 350 ~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k-kpL~~~tgL~t~~~~tdc~FSPd~kli~TGt 428 (641)
T KOG0772|consen 350 TVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK-KPLNVRTGLPTPFPGTDCCFSPDDKLILTGT 428 (641)
T ss_pred ccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc-cchhhhcCCCccCCCCccccCCCceEEEecc
Confidence 3 2 233358877 899999 9999999999999999999999864 44554444322 1226999999999995
Q ss_pred C------Cc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1557 N------NK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1557 ~------D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
. -+ +.+||-. ....++.+.- ....|..+.|+|--..+.+|+.||+++|+
T Consensus 429 S~~~~~~~g~L~f~d~~-----------t~d~v~ki~i---~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 429 SAPNGMTAGTLFFFDRM-----------TLDTVYKIDI---STASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred cccCCCCCceEEEEecc-----------ceeeEEEecC---CCceEEEEeecchhhheeeecCCCceEEE
Confidence 2 23 7777743 1112222211 23458889999998888889999999985
No 479
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.89 E-value=8.4e-23 Score=243.13 Aligned_cols=200 Identities=17% Similarity=0.165 Sum_probs=153.7
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++|+..+.||+|+||.||+|.+..... .....+|+|.+..... .....++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~--~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~~~~l~h~niv~~ 74 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGE--TVKIPVAIKILNETTG-PKANVEFM--------DEALIMASMDHPHLVRL 74 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCC--cceeeEEEEeccccCC-HHHHHHHH--------HHHHHHHhCCCCCcccE
Confidence 4578899999999999999998632111 1124678998865322 22222344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++++... ..++++||++ |+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~-~~~~v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~--~~kL 150 (303)
T cd05110 75 LGVCLSP-TIQLVTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKI 150 (303)
T ss_pred EEEEcCC-CceeeehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC--ceEE
Confidence 9998754 4678999999 699999874 234578889999999999999999999999999999999999888 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+. |+++.
T Consensus 151 ~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l-~el~t 206 (303)
T cd05110 151 TDFGLARLLEGDEKEYN---------ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI-WELMT 206 (303)
T ss_pred ccccccccccCcccccc---------cCCCccccccCCHHHhccCCCChHHHHHHHHHHH-HHHHh
Confidence 99999985432111000 0112245679999999989999999999999665 55443
No 480
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.89 E-value=1.4e-21 Score=232.95 Aligned_cols=333 Identities=16% Similarity=0.188 Sum_probs=230.9
Q ss_pred ccccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC--C--------------------ceeE----------
Q 000355 1218 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--A--------------------SILS---------- 1263 (1620)
Q Consensus 1218 ~~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~--g--------------------~~l~---------- 1263 (1620)
...+.||+|||.+ |+.-+. +..++||+|.|..||||.+. + ..+.
T Consensus 184 v~el~GH~DWIrsl~f~~~~~--~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 184 VAELEGHTDWIRSLAFARLGG--DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred EEEeeccchhhhhhhhhccCC--CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 4568899999987 443332 24569999999999999965 3 1121
Q ss_pred EeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC--e-----EEEEEecCCcceeEEEEeeCCCeE-EEe-C
Q 000355 1264 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--N-----CVSGYYGHEEVVNDICVLSSSGRI-ASC-D 1334 (1620)
Q Consensus 1264 tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg--~-----~l~~l~gH~~~V~sV~f~~~~~~l-aS~-D 1334 (1620)
.+.||.+.|.++.|+|.+..|+|+|+ |+++.+|...+. - ++....|..+.-.++-|++++..+ +.+ -
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASa----DksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~ 337 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASA----DKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRT 337 (764)
T ss_pred hhcCcccceEEEEEccchhhheeccc----CcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEeccc
Confidence 23399999999999999999999998 999999987543 2 233344556678899999999877 433 8
Q ss_pred CcEEEEeCCCC-ceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEE
Q 000355 1335 GTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1335 gtV~IWD~~tg-~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasg 1413 (1620)
|..++|..... ...... ...+|.+.| +.++|.|.|++++++
T Consensus 338 Gg~hlWkt~d~~~w~~~~----------------------------~iSGH~~~V----------~dv~W~psGeflLsv 379 (764)
T KOG1063|consen 338 GGFHLWKTKDKTFWTQEP----------------------------VISGHVDGV----------KDVDWDPSGEFLLSV 379 (764)
T ss_pred CcEEEEeccCccceeecc----------------------------ccccccccc----------eeeeecCCCCEEEEe
Confidence 99999983321 111110 011233444 455555669999999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECC---------
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR--------- 1484 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~--------- 1484 (1620)
+.|.|-|++-.- |+... |..-..+.-|.--.+|++|.++ ...+++|.+..-+|+|+..
T Consensus 380 s~DQTTRlFa~w-g~q~~-wHEiaRPQiHGyDl~c~~~vn~-----------~~~FVSgAdEKVlRvF~aPk~fv~~l~~ 446 (764)
T KOG1063|consen 380 SLDQTTRLFARW-GRQQE-WHEIARPQIHGYDLTCLSFVNE-----------DLQFVSGADEKVLRVFEAPKSFVKSLMA 446 (764)
T ss_pred ccccceeeeccc-ccccc-eeeecccccccccceeeehccC-----------CceeeecccceeeeeecCcHHHHHHHHH
Confidence 999999998654 22111 2111111123444566665432 1234455555555555431
Q ss_pred ----------------------------------CCc---------------------------------EEEEEEccCC
Q 000355 1485 ----------------------------------SGN---------------------------------VIASWRAHDG 1497 (1620)
Q Consensus 1485 ----------------------------------tg~---------------------------------~i~~l~gH~~ 1497 (1620)
+|. .+.++-||..
T Consensus 447 i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGy 526 (764)
T KOG1063|consen 447 ICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGY 526 (764)
T ss_pred HhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCce
Confidence 111 1233458999
Q ss_pred cEEEEE-eCCCCEEEEEeCCC-----cEEEEECCCCCCCCCeEeecCCCCEE--EEeecCCEEEEEeCCc-eEEEeccCC
Q 000355 1498 YVTKLA-APEDHLLVSSSLDK-----TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKS 1568 (1620)
Q Consensus 1498 ~V~sva-spdg~~LaSgS~Dg-----tI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~ 1568 (1620)
.|.+++ +|+|+++||++... .|++|+..+- .+...+.+|+-.|+ .|||||++|+++|.|+ +.+|.....
T Consensus 527 Ev~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~ 604 (764)
T KOG1063|consen 527 EVYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQED 604 (764)
T ss_pred eEEEEEecCCCCEEeehhhhCCccceEEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecc
Confidence 999999 99999999998654 4899999886 55668999999999 5999999999999999 999997521
Q ss_pred CCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1569 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1569 ~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.....+ .+....|...|++++|+||++.|||+|.|.+|++|
T Consensus 605 --~~~e~~--------fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW 645 (764)
T KOG1063|consen 605 --IKDEFR--------FACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVW 645 (764)
T ss_pred --cchhhh--------hccccccceEEEEcccCcccceeEEecCCceEEEE
Confidence 111111 11123699999999999999999999999999999
No 481
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=2e-21 Score=212.85 Aligned_cols=266 Identities=15% Similarity=0.239 Sum_probs=199.3
Q ss_pred cccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC-CeEE-EEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeC
Q 000355 1267 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-INCV-SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1342 (1620)
Q Consensus 1267 gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t-g~~l-~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~ 1342 (1620)
...+.|.+++|||....++++|. ||++||+|++.. |..+ +....|.++|.+++|+.+|..+ +++|+.+++||+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~S---WD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGS---WDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred CcccchheeEeccccCceEEecc---cCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 45788999999997666776664 899999999976 3333 3345699999999999999888 677999999999
Q ss_pred CCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCC--CEEEEEECCCcEE
Q 000355 1343 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV--ERLVVGIGNGSLR 1420 (1620)
Q Consensus 1343 ~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg--~~lasgs~DgtVr 1420 (1620)
.+|+..+ +..| .++|..+.| -+.. ..|++||.|++||
T Consensus 102 ~S~Q~~~-v~~H------------------------------d~pvkt~~w----------v~~~~~~cl~TGSWDKTlK 140 (347)
T KOG0647|consen 102 ASGQVSQ-VAAH------------------------------DAPVKTCHW----------VPGMNYQCLVTGSWDKTLK 140 (347)
T ss_pred cCCCeee-eeec------------------------------ccceeEEEE----------ecCCCcceeEeccccccee
Confidence 9996543 3222 333444443 3333 4899999999999
Q ss_pred EEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEE-EEEE-ccCCc
Q 000355 1421 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI-ASWR-AHDGY 1498 (1620)
Q Consensus 1421 lwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i-~~l~-gH~~~ 1498 (1620)
+||.|...++.++.- +..+.+...- ..+++++..+..|.+|+++.+... +..+ .-.-.
T Consensus 141 fWD~R~~~pv~t~~L-------PeRvYa~Dv~-------------~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q 200 (347)
T KOG0647|consen 141 FWDTRSSNPVATLQL-------PERVYAADVL-------------YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQ 200 (347)
T ss_pred ecccCCCCeeeeeec-------cceeeehhcc-------------CceeEEEecCCcEEEEEcCCCcchhhhhcCcccce
Confidence 999999988887763 4445544321 147888999999999999866422 1111 12345
Q ss_pred EEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCC-----C-EE-----EEeecCCEEEEEeCCc-eEEEec
Q 000355 1499 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN-----G-IS-----GFSVWGQDVISISNNK-IGLSSL 1565 (1620)
Q Consensus 1499 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~-----~-V~-----afSpdg~~LaSgs~D~-I~vwdl 1565 (1620)
++||+ ..|....+-||-+|.+.|..+..+.++.-++++.|+. . |. +|.|.-..|+|++.|| ..+||-
T Consensus 201 ~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDk 280 (347)
T KOG0647|consen 201 TRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDK 280 (347)
T ss_pred eeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecc
Confidence 88999 8888778999999999999998875566789999974 2 43 4999999999999999 999995
Q ss_pred cCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEE
Q 000355 1566 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG 1610 (1620)
Q Consensus 1566 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasg 1610 (1620)
.. .+++... ..|..+|++++|+.+|.+||-+
T Consensus 281 da-----------r~kLk~s---~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 281 DA-----------RTKLKTS---ETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred hh-----------hhhhhcc---CcCCCccceeEecCCCCEEEEE
Confidence 41 1233322 2478899999999999999865
No 482
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.88 E-value=1.5e-22 Score=234.32 Aligned_cols=188 Identities=16% Similarity=0.121 Sum_probs=145.0
Q ss_pred eceeeeeeEEEEEEEecccccc----cccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 110 AFIGICSYSIFEELASNFLSGC----LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~----~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
+.||+|+||.||+|.+...... ......+++|.+...... ...+. +|+.+++.++||||++++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~~~ 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFF--------ETASLMSQLSHKHLVKLYGV 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHH--------HHHHHHHcCCCcchhheeeE
Confidence 4799999999999997332100 111245777876543211 33444 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCc-----eEE
Q 000355 186 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----SWL 259 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~-----~~l 259 (1620)
+.. +..++||||++ |+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++. ..+
T Consensus 70 ~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 70 CVR-DENIMVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred Eec-CCcEEEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeE
Confidence 988 77899999999 5999999843 226788899999999999999999999999999999999987652 269
Q ss_pred EEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccccc--ccccccccccccccchHHHH
Q 000355 260 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 260 KL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~--~y~~~~d~W~~G~isnfeyL 326 (1620)
||+|||+++..... ....++..|+|||++.+. .++.++|+|+.|.+. |+.+
T Consensus 148 kl~Dfg~a~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~-~~l~ 200 (259)
T cd05037 148 KLSDPGIPITVLSR---------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTL-LEIC 200 (259)
T ss_pred EeCCCCcccccccc---------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHH-HHHH
Confidence 99999999853210 011245679999998876 789999999999765 4443
No 483
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.88 E-value=1.9e-20 Score=227.15 Aligned_cols=349 Identities=19% Similarity=0.210 Sum_probs=248.6
Q ss_pred eec-cCCCCCCCCCCeEEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCC
Q 000355 1228 FWF-PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1305 (1620)
Q Consensus 1228 V~~-~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg 1305 (1620)
|.+ ++|..+. .-++.|+.+|.+.+|+++ ++.+.+++++...|+++.=+|-=..+|.|.. ||+|.+++++.+
T Consensus 162 Ital~HP~TYL---NKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~----~G~ViifNlK~d 234 (910)
T KOG1539|consen 162 ITALLHPSTYL---NKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLE----NGTVIIFNLKFD 234 (910)
T ss_pred eeeEecchhhe---eeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEecc----CceEEEEEcccC
Confidence 665 7788776 228899999999999999 8999999999999999999999889999998 899999999999
Q ss_pred eEEEEEecCCcceeEEEEeeCCCeE-EEe--CCcEEEEeCCCCceEEEEe-ccCCc-cccccCCCCCccccc--cccccc
Q 000355 1306 NCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFA-EQSMD-SLHGGSPSSSISKIN--TDQVGM 1378 (1620)
Q Consensus 1306 ~~l~~l~gH~~~V~sV~f~~~~~~l-aS~--DgtV~IWD~~tg~~i~~l~-~~~~~-~~~~~s~s~~~~~~~--~~~~~~ 1378 (1620)
+.+.+|+.-.+.|++++|..||.-+ +++ .|.+.+||++..+.+.... .|... .....-+..++.... +....+
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~ 314 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV 314 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence 9999999435999999999888876 555 6899999999887776654 23111 001001111111100 001111
Q ss_pred c-------------cccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCC-------c----------
Q 000355 1379 L-------------NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-------Q---------- 1428 (1620)
Q Consensus 1379 ~-------------~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg-------~---------- 1428 (1620)
+ ...+|+.+-.++.|.+ .+|..+.+++.|++.+.+++... +
T Consensus 315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~---------~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~ 385 (910)
T KOG1539|consen 315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYG---------SQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKV 385 (910)
T ss_pred EEeeCCCCcchheeeccCCCCCchheeeec---------cCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccc
Confidence 1 1123444443444432 35667777777777777665321 1
Q ss_pred ------------------------------------------------e-eEEeeCCCcccccCCccceEeeeCCCcccc
Q 000355 1429 ------------------------------------------------K-LHLWRGEPTELGFPSLVSAICACGSEKMQA 1459 (1620)
Q Consensus 1429 ------------------------------------------------~-l~~l~~~~~~v~~~~~V~sva~~~~~~~~~ 1459 (1620)
. -+.+....- -.....+++||
T Consensus 386 ~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~-~~~~~~~~av~--------- 455 (910)
T KOG1539|consen 386 NVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRF-KKDDINATAVC--------- 455 (910)
T ss_pred cccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccc-cccCcceEEEE---------
Confidence 0 000000000 00011233333
Q ss_pred CcccCCCCEEEEEecCCcEEEEECCCCcEEEEE---EccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCC------
Q 000355 1460 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW---RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP------ 1529 (1620)
Q Consensus 1460 ~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l---~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~------ 1529 (1620)
.++.|++.+.|++.|+|-+|++.+|-...++ ..|+++|+.++ ..-++.++|++.||.++.||..+...
T Consensus 456 --vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l 533 (910)
T KOG1539|consen 456 --VSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRL 533 (910)
T ss_pred --EeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeecc
Confidence 3467899999999999999999999988888 58999999999 66678999999999999999876421
Q ss_pred ---------------------------------CCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccCCCCCCC
Q 000355 1530 ---------------------------------SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDG 1573 (1620)
Q Consensus 1530 ---------------------------------~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1573 (1620)
+.+..+.||++.|++ |||||++|++++.|+ |++||+.. +
T Consensus 534 ~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt-----~ 608 (910)
T KOG1539|consen 534 GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT-----G 608 (910)
T ss_pred CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC-----c
Confidence 122456789999994 999999999999999 99999862 2
Q ss_pred cceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCC-CcEEEc
Q 000355 1574 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED-GYLRLC 1619 (1620)
Q Consensus 1574 ~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~D-G~IrlW 1619 (1620)
.. +-. -.-..+..+++|+|+|.+|||...| .-|.+|
T Consensus 609 ~l------ID~----~~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 609 TL------IDG----LLVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred ce------eee----EecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 21 100 1245678999999999999999988 668888
No 484
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.88 E-value=4e-21 Score=210.51 Aligned_cols=262 Identities=16% Similarity=0.243 Sum_probs=199.6
Q ss_pred Ccee--ccCCCCCCCCCCeEEEEcCCCCEEEEeCCC--c-eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEE
Q 000355 1226 PWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIKA--S-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1300 (1620)
Q Consensus 1226 ~~V~--~~Spdg~~~~~~~lasgS~D~~i~lWd~~g--~-~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLW 1300 (1620)
|.|. +|||... .+++.||.|++||+|++.. . .-+....|.++|.+++|+.||..+++|+. |+.+++|
T Consensus 28 DsIS~l~FSP~~~----~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~~k~w 99 (347)
T KOG0647|consen 28 DSISALAFSPQAD----NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQAKLW 99 (347)
T ss_pred cchheeEeccccC----ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeecc----CCceEEE
Confidence 4444 4888222 3488999999999999872 3 22455679999999999999999999998 9999999
Q ss_pred eCCCCeEEEEEecCCcceeEEEEeeCCC--eE--EEeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccccccc
Q 000355 1301 ELTRINCVSGYYGHEEVVNDICVLSSSG--RI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1376 (1620)
Q Consensus 1301 dl~tg~~l~~l~gH~~~V~sV~f~~~~~--~l--aS~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1376 (1620)
|+.+++ +..+..|.++|.++.|.+... .| +|+|+|||.||++....+.++.-+.
T Consensus 100 DL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe--------------------- 157 (347)
T KOG0647|consen 100 DLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE--------------------- 157 (347)
T ss_pred EccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc---------------------
Confidence 999995 456778999999999988766 44 7779999999999888887776432
Q ss_pred ccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCc
Q 000355 1377 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1456 (1620)
Q Consensus 1377 ~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~ 1456 (1620)
.+.+... -...++++..+..|.+|+++.+... ++.+.... .-.++||+...
T Consensus 158 ----------RvYa~Dv------------~~pm~vVata~r~i~vynL~n~~te--~k~~~SpL--k~Q~R~va~f~--- 208 (347)
T KOG0647|consen 158 ----------RVYAADV------------LYPMAVVATAERHIAVYNLENPPTE--FKRIESPL--KWQTRCVACFQ--- 208 (347)
T ss_pred ----------eeeehhc------------cCceeEEEecCCcEEEEEcCCCcch--hhhhcCcc--cceeeEEEEEe---
Confidence 1111111 1347888999999999999876432 22222322 23378888753
Q ss_pred cccCcccCCCCEEEEEecCCcEEEEECCCC--cEEEEEEccCC---------cEEEEE-eCCCCEEEEEeCCCcEEEEEC
Q 000355 1457 MQAGGAVASPSWIAAGLSSGQCRLFDVRSG--NVIASWRAHDG---------YVTKLA-APEDHLLVSSSLDKTLRIWDL 1524 (1620)
Q Consensus 1457 ~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg--~~i~~l~gH~~---------~V~sva-spdg~~LaSgS~DgtI~IWDl 1524 (1620)
+....|.|+-.|.+.+..+..+ +.--+++.|.. .|++|+ +|.-..|+|++.||++..||-
T Consensus 209 --------d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDk 280 (347)
T KOG0647|consen 209 --------DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDK 280 (347)
T ss_pred --------cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecc
Confidence 3345699999999999998877 44456677763 467777 888889999999999999998
Q ss_pred CCCCCCCCeEeecCCCCEEE--EeecCCEEEEEe
Q 000355 1525 RRNWPSQPTVFKGHTNGISG--FSVWGQDVISIS 1556 (1620)
Q Consensus 1525 ~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs 1556 (1620)
... ..+.+...|..+|+| |+.+|.++|-+.
T Consensus 281 dar--~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 281 DAR--TKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred hhh--hhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 765 566777889999985 999999887663
No 485
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=2.6e-21 Score=233.08 Aligned_cols=258 Identities=16% Similarity=0.190 Sum_probs=212.8
Q ss_pred EEEEcCCCCEEEEeCC-CceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEec-CCcceeE
Q 000355 1243 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG-HEEVVND 1320 (1620)
Q Consensus 1243 lasgS~D~~i~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~g-H~~~V~s 1320 (1620)
+|.|. ...+.+|+.. +....-..-+.+.|++|.|+++|++|+.|.. +|+|.|||..+.+.+..+.+ |...|-+
T Consensus 191 laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~----~g~v~iwD~~~~k~~~~~~~~h~~rvg~ 265 (484)
T KOG0305|consen 191 LAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTS----DGTVQIWDVKEQKKTRTLRGSHASRVGS 265 (484)
T ss_pred EEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeec----CCeEEEEehhhccccccccCCcCceeEE
Confidence 55554 3569999988 5544444445899999999999999999998 89999999999999999998 9999999
Q ss_pred EEEeeCCCeE--EEeCCcEEEEeCCCCceEEE-EeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCc
Q 000355 1321 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSV-FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1397 (1620)
Q Consensus 1321 V~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~-l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1397 (1620)
++|. +..+ ++.|+.|.++|++..+.... +.+|. ..
T Consensus 266 laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~----------------------------------------qe 303 (484)
T KOG0305|consen 266 LAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHR----------------------------------------QE 303 (484)
T ss_pred Eecc--CceEEEecCCCcEEEEEEecchhhhhhhhccc----------------------------------------ce
Confidence 9997 3333 66799999999998765433 33332 23
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEe--cC
Q 000355 1398 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL--SS 1475 (1620)
Q Consensus 1398 vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs--~D 1475 (1620)
|+.+.|++|+.++|+|+.|+.+.|||....+++..+..| ...|.+++|||.. ...||+|+ .|
T Consensus 304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H------~aAVKA~awcP~q----------~~lLAsGGGs~D 367 (484)
T KOG0305|consen 304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEH------TAAVKALAWCPWQ----------SGLLATGGGSAD 367 (484)
T ss_pred eeeeEECCCCCeeccCCCccceEeccCCCccccEEEecc------ceeeeEeeeCCCc----------cCceEEcCCCcc
Confidence 777888889999999999999999999888888888765 4459999999744 47899865 69
Q ss_pred CcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEE--EeCCCcEEEEECCCCCCCCCeEeecCCCCEE--EEeecCC
Q 000355 1476 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVS--SSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQ 1550 (1620)
Q Consensus 1476 g~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaS--gS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~ 1550 (1620)
++|++||+.+|+.+..+. -...|.+|. ++..+-|++ |-.++.|.||+..+. +.+..+.||+..|. ++||||.
T Consensus 368 ~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~--~~~~~l~gH~~RVl~la~SPdg~ 444 (484)
T KOG0305|consen 368 RCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSM--KLVAELLGHTSRVLYLALSPDGE 444 (484)
T ss_pred cEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEecccc--ceeeeecCCcceeEEEEECCCCC
Confidence 999999999999998876 356788888 777765554 345778999999886 67789999999998 5999999
Q ss_pred EEEEEeCCc-eEEEecc
Q 000355 1551 DVISISNNK-IGLSSLS 1566 (1620)
Q Consensus 1551 ~LaSgs~D~-I~vwdl~ 1566 (1620)
.+++|+.|. +++|++-
T Consensus 445 ~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLF 461 (484)
T ss_pred EEEEecccCcEEecccc
Confidence 999999998 9999986
No 486
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=1.4e-21 Score=226.12 Aligned_cols=259 Identities=18% Similarity=0.228 Sum_probs=202.1
Q ss_pred ccCCCCCCCCCCeEEEEcCCCCEEEEeCCC-ceeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE
Q 000355 1230 FPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1308 (1620)
Q Consensus 1230 ~~Spdg~~~~~~~lasgS~D~~i~lWd~~g-~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l 1308 (1620)
+|||...+ ++.+|+| -.+.||+..+ ...+++.-....|.++.|-.||+++|+|.. .|.|+|+|..+...+
T Consensus 33 ~fsp~~P~---d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~----sG~V~vfD~k~r~iL 103 (487)
T KOG0310|consen 33 CFSPKHPY---DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE----SGHVKVFDMKSRVIL 103 (487)
T ss_pred ecCCCCCC---ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC----cCcEEEeccccHHHH
Confidence 38887765 4344554 5688998773 455666677889999999999999999987 799999998776677
Q ss_pred EEEecCCcceeEEEEeeCCCeE-E--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCC
Q 000355 1309 SGYYGHEEVVNDICVLSSSGRI-A--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1385 (1620)
Q Consensus 1309 ~~l~gH~~~V~sV~f~~~~~~l-a--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s 1385 (1620)
+.+.+|+.+|+.+.|+|.+..+ + |.|+.+++||+.++.....+.+|.
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ht------------------------------ 153 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHT------------------------------ 153 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCc------------------------------
Confidence 8899999999999999988876 4 448999999999888644555442
Q ss_pred CCeEEEeecCCceEEEEEecC-CCEEEEEECCCcEEEEECCCC-ceeEEeeCCCcccccCCccceEeeeCCCccccCccc
Q 000355 1386 SGILSTAFDGNLYTCLHHIEC-VERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1463 (1620)
Q Consensus 1386 ~~v~sv~f~~~~vt~v~~s~d-g~~lasgs~DgtVrlwDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~ 1463 (1620)
. .|.|.+++|. +..+++||.||+||+||+++. ..+.++. |...|..|++-
T Consensus 154 D----------YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-------hg~pVe~vl~l----------- 205 (487)
T KOG0310|consen 154 D----------YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-------HGCPVESVLAL----------- 205 (487)
T ss_pred c----------eeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-------CCCceeeEEEc-----------
Confidence 2 3455555554 457889999999999999986 5555554 45558888875
Q ss_pred CCCCEEEEEecCCcEEEEECCCCc-EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCC
Q 000355 1464 ASPSWIAAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1541 (1620)
Q Consensus 1464 p~g~~LasGs~Dg~I~lwD~~tg~-~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1541 (1620)
|+|..||+++. ..|++||+.+|. .+..+..|...|+|+. ..+++.|+|||.|+.|++||+.+- +.++.++ ..++
T Consensus 206 psgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~--Kvv~s~~-~~~p 281 (487)
T KOG0310|consen 206 PSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY--KVVHSWK-YPGP 281 (487)
T ss_pred CCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce--EEEEeee-cccc
Confidence 55568888775 489999999665 4555556999999999 778999999999999999997664 3334433 4567
Q ss_pred EE--EEeecCCEEEEEeCCc
Q 000355 1542 IS--GFSVWGQDVISISNNK 1559 (1620)
Q Consensus 1542 V~--afSpdg~~LaSgs~D~ 1559 (1620)
|. +++|+++.++.|..||
T Consensus 282 vLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 282 VLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred eeeEEecCCCceEEEecccc
Confidence 77 4999999999999999
No 487
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.88 E-value=3e-21 Score=221.80 Aligned_cols=280 Identities=18% Similarity=0.267 Sum_probs=211.7
Q ss_pred cccccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-Ccee----E-------------Ee-ecccCcEEEEEE
Q 000355 1219 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASIL----S-------------SI-RAHHGALRSVAV 1277 (1620)
Q Consensus 1219 ~~l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l----~-------------tl-~gH~~~V~svaf 1277 (1620)
.....|.-.|.+ ++||+.+ ..++|.|++|.=|++. |... . .- ++|...|.+++.
T Consensus 136 ~~~~~H~~s~~~vals~d~~~-----~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKR-----VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred eeeccccCcceEEEeeccccc-----eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 344556666664 8999987 9999999999999976 3311 1 11 389999999999
Q ss_pred ccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE--EEeCCcEEEEeCCCCceEEEEeccC
Q 000355 1278 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQS 1355 (1620)
Q Consensus 1278 spdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l--aS~DgtV~IWD~~tg~~i~~l~~~~ 1355 (1620)
|+||++||+|+. |..|.||+..|.+.++.++||.+.|.+++|-.....+ +|.|++|++|++..-..+.++-+|.
T Consensus 211 S~Dgkylatgg~----d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHq 286 (479)
T KOG0299|consen 211 SSDGKYLATGGR----DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQ 286 (479)
T ss_pred cCCCcEEEecCC----CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCc
Confidence 999999999997 8999999999999999999999999999997665555 6669999999998766666665542
Q ss_pred CccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeC
Q 000355 1356 MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1435 (1620)
Q Consensus 1356 ~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~ 1435 (1620)
+.|.++... .-++.+-+|+.|+++++|++.. +....+.+
T Consensus 287 ------------------------------d~v~~IdaL----------~reR~vtVGgrDrT~rlwKi~e-esqlifrg 325 (479)
T KOG0299|consen 287 ------------------------------DGVLGIDAL----------SRERCVTVGGRDRTVRLWKIPE-ESQLIFRG 325 (479)
T ss_pred ------------------------------cceeeechh----------cccceEEeccccceeEEEeccc-cceeeeeC
Confidence 223333222 2255666777999999999943 33344565
Q ss_pred CCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE-cc-----------CCcEEEEE
Q 000355 1436 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AH-----------DGYVTKLA 1503 (1620)
Q Consensus 1436 ~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~-gH-----------~~~V~sva 1503 (1620)
+ ...+.|+||. +...+++|++||.|.+|++.+.+++.+.+ +| ..+|++|+
T Consensus 326 ~------~~sidcv~~I------------n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla 387 (479)
T KOG0299|consen 326 G------EGSIDCVAFI------------NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLA 387 (479)
T ss_pred C------CCCeeeEEEe------------cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeE
Confidence 4 3458889985 33579999999999999999988887764 33 12899999
Q ss_pred -eCCCCEEEEEeCCCcEEEEECCCCC--CCCCeEeecCCCCEE--EEeecCCEEEEE-eCCc-eEEEeccC
Q 000355 1504 -APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKGHTNGIS--GFSVWGQDVISI-SNNK-IGLSSLSK 1567 (1620)
Q Consensus 1504 -spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~gH~~~V~--afSpdg~~LaSg-s~D~-I~vwdl~~ 1567 (1620)
.|...+++|||.+|.|++|-+..+. ...+..+. -.+-|+ +|+.+|+.+++| +... +.-|-...
T Consensus 388 ~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k 457 (479)
T KOG0299|consen 388 VIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLK 457 (479)
T ss_pred ecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEecccccccceeeEee
Confidence 8999999999999999999999872 22233333 344566 489999987777 4444 77777653
No 488
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.88 E-value=1.9e-22 Score=235.14 Aligned_cols=199 Identities=18% Similarity=0.173 Sum_probs=152.1
Q ss_pred eceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeEEEeC
Q 000355 110 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 189 (1620)
Q Consensus 110 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~~~~~ 189 (1620)
+.||+|+||.||+|+..........++.+|+|.+.... .......+. +|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 71 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFL--------KEAHLMSNFNHPNIVKLLGVCLLN 71 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHH--------HHHHHHHhcCCCCeeeEeeeecCC
Confidence 46999999999999863322112345789999886532 222333444 899999999999999999999999
Q ss_pred CEEEEEEeCCC-CCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCC---ceEEE
Q 000355 190 GLITSVIPKTP-YTLENILQFS-----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC---WSWLY 260 (1620)
Q Consensus 190 ~~~~lV~E~~~-g~L~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~---~~~lK 260 (1620)
+..++||||++ ++|.+++... ....++...+..++.||+.||.|||+++++||||||+|||++.++ ...+|
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceE
Confidence 99999999998 5999999742 223477888999999999999999999999999999999998754 12699
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
|+|||+++........... ....++..|+|||.+.+..++.+.|+|+.|.+. |++++
T Consensus 152 l~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-~ellt 208 (269)
T cd05044 152 IGDFGLARDIYKSDYYRKE---------GEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLM-WEILT 208 (269)
T ss_pred ECCcccccccccccccccC---------cccCCCccccCHHHHccCCcccchhHHHHHHHH-HHHHH
Confidence 9999999843221110000 011235679999999998999999999999776 66553
No 489
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.88 E-value=3.6e-22 Score=235.60 Aligned_cols=196 Identities=17% Similarity=0.140 Sum_probs=154.6
Q ss_pred CeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCCh--hhHHHHHHhcCCCcHhHHHhhccC-Ccccccc
Q 000355 105 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 181 (1620)
Q Consensus 105 ~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~~~~~~~~~~Ei~iL~~l-~HpNIv~ 181 (1620)
+|++.+.||+|+||.||++++.. ...++..+|||.++...... .....+. +|++++..+ +||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~---~~~~~~~~avk~~~~~~~~~~~~~~~~~~--------~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVG---GHDAGKLYAMKVLKKATIVQKAKTAEHTR--------TERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEec---cccCCcEEEEEEEehHHHHhhhhHHHHHH--------HHHHHHHhccCCcchhh
Confidence 48889999999999999988532 22467889999987532211 1112233 899999999 5999999
Q ss_pred eeeEEEeCCEEEEEEeCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEE
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lK 260 (1620)
+++.+..+..+++||||+++ +|.+.+. ....+++..++.++.|+++||.|||++|++||||||+||+++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~--~~~ 145 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVV 145 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999985 9999987 345688999999999999999999999999999999999999998 899
Q ss_pred EeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccc--cccccccccccccchHHHH
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYL 326 (1620)
Q Consensus 261 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~--y~~~~d~W~~G~isnfeyL 326 (1620)
|+|||+++........ ......++..|+|||.+.+.. .+..+|+|+.|.+. |+++
T Consensus 146 l~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il-~el~ 202 (288)
T cd05583 146 LTDFGLSKEFLAEEEE----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT-FELL 202 (288)
T ss_pred EEECcccccccccccc----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH-HHHH
Confidence 9999998853221100 011122577899999887654 77899999999765 4444
No 490
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=9.4e-21 Score=237.59 Aligned_cols=296 Identities=15% Similarity=0.118 Sum_probs=217.2
Q ss_pred ccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCC------------CeEEEEEecCCcceeEEEEeeCCCeEEEe--
Q 000355 1268 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR------------INCVSGYYGHEEVVNDICVLSSSGRIASC-- 1333 (1620)
Q Consensus 1268 H~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~t------------g~~l~~l~gH~~~V~sV~f~~~~~~laS~-- 1333 (1620)
++..|.+|+.+|||..++|||. +.|+.+++|+... .+.+.+...|.+.|+||.|+++|.++||+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq--~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQ--VLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred CCeeEEEEEecCCceeEecCCc--cccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 3557999999999999999994 3599999998642 23456778899999999999999999655
Q ss_pred CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEE
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1334 DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasg 1413 (1620)
|+.|.||+-... .....-+ +..+. ..+ ..-..+....-+...|..++|+|++.+++++
T Consensus 90 D~~v~iW~~~~~-~~~~~fg---------s~g~~------~~v------E~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~ 147 (942)
T KOG0973|consen 90 DRLVMIWERAEI-GSGTVFG---------STGGA------KNV------ESWKVVSILRGHDSDVLDVNWSPDDSLLVSV 147 (942)
T ss_pred cceEEEeeeccc-CCccccc---------ccccc------ccc------ceeeEEEEEecCCCccceeccCCCccEEEEe
Confidence 999999997641 1000000 00000 000 0000111222244456777777889999999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEE
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1493 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~ 1493 (1620)
+.|++|.+||.++.+.+..+++|.+ .|..+.|. |-|+++|+=++|++|++|++.+....+.+.
T Consensus 148 s~DnsViiwn~~tF~~~~vl~~H~s------~VKGvs~D-----------P~Gky~ASqsdDrtikvwrt~dw~i~k~It 210 (942)
T KOG0973|consen 148 SLDNSVIIWNAKTFELLKVLRGHQS------LVKGVSWD-----------PIGKYFASQSDDRTLKVWRTSDWGIEKSIT 210 (942)
T ss_pred cccceEEEEccccceeeeeeecccc------cccceEEC-----------CccCeeeeecCCceEEEEEcccceeeEeec
Confidence 9999999999999999999997654 47777775 677899999999999999988776777665
Q ss_pred ccC------CcEEEEE-eCCCCEEEEEe----CCCcEEEEECCCCCCCCCeEeecCCCCEEE--Eeec-----CC-----
Q 000355 1494 AHD------GYVTKLA-APEDHLLVSSS----LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW-----GQ----- 1550 (1620)
Q Consensus 1494 gH~------~~V~sva-spdg~~LaSgS----~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd-----g~----- 1550 (1620)
.+- ..++.+. +|||++|+|.- .-.++.|.+-.+. +.-..+-||..+|.+ |+|. .+
T Consensus 211 ~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tW--k~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~ 288 (942)
T KOG0973|consen 211 KPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTW--KVDKDLVGHSAPVEVVRFNPKLFERNNKNGTST 288 (942)
T ss_pred cchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCc--eeeeeeecCCCceEEEEeChHHhccccccCCcc
Confidence 442 3567777 99999999864 3456888877554 555689999999885 6662 11
Q ss_pred -------EEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1551 -------DVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1551 -------~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+|+||.|+ |.||.... ..+.++...+ ....|.+++|+|||..|.+||.||+|.++
T Consensus 289 ~~~~~y~i~AvgSqDrSlSVW~T~~-----~RPl~vi~~l--------f~~SI~DmsWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 289 QPNCYYCIAAVGSQDRSLSVWNTAL-----PRPLFVIHNL--------FNKSIVDMSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred CCCcceEEEEEecCCccEEEEecCC-----CCchhhhhhh--------hcCceeeeeEcCCCCeEEEEecCCeEEEE
Confidence 678899999 99999641 1222333333 34579999999999999999999999875
No 491
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.87 E-value=9.7e-24 Score=228.15 Aligned_cols=197 Identities=19% Similarity=0.241 Sum_probs=152.9
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhh-ccCCcccccc
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVP-GCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL-~~l~HpNIv~ 181 (1620)
.++.+-+..||.|+||+|+|-.+ .+.|+..|||+|+.... ..+.++++ .|.+.. +.-+.||||+
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~h------k~sg~~mAVKrIr~~n~-~keq~rll--------~e~d~~mks~~cp~IVk 127 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLH------KPSGKLMAVKRIRSNNI-EKEQKRLL--------MEHDTVMKSSNCPNIVK 127 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhc------CccCcEEEEEEeeeccc-hHHHHHHH--------HHHHHHHhhcCCcHHHH
Confidence 34566688999999999999775 26789999999987544 34445555 677754 4446899999
Q ss_pred eeeEEEeCCEEEEEEeCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCceEecCCCce
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 182 l~~~~~~~~~~~lV~E~~~g~L~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~~~~ 257 (1620)
+||....++..||.||+|+-+|..+.++ -++..++|.-+-.|..-++.||.||-. ..|||||+||+|||++..|
T Consensus 128 fyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-- 205 (361)
T KOG1006|consen 128 FYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-- 205 (361)
T ss_pred HhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--
Confidence 9999999999999999999776655542 355678898888899999999999987 6899999999999999999
Q ss_pred EEEEeecCCcccCCCCCcccCCCCCCccceecccccCccchhhhccc--ccccccccccccccccchHHHHhhhhcccCC
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 335 (1620)
Q Consensus 258 ~lKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~~gR 335 (1620)
.+||||||++......-. .+. ..+|. .|||||.+. ...|+-.+|.|+.| ++..+...|+
T Consensus 206 ~vKLCDFGIcGqLv~SiA----kT~-----daGCr---pYmAPERi~p~~~gyDiRSDvWSLG-------ITL~EvAtG~ 266 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDSIA----KTV-----DAGCR---PYMAPERIDPSDKGYDIRSDVWSLG-------ITLYEVATGN 266 (361)
T ss_pred CEeeecccchHhHHHHHH----hhh-----ccCCc---cccChhccCCccCCcchhhhhhhhc-------ceEeeeecCC
Confidence 899999999985432211 111 22333 699999775 44599999999999 4455555554
No 492
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=1.1e-20 Score=217.18 Aligned_cols=278 Identities=20% Similarity=0.272 Sum_probs=211.4
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEE----EE-------------E-ecCCcceeEEEE
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV----SG-------------Y-YGHEEVVNDICV 1323 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l----~~-------------l-~gH~~~V~sV~f 1323 (1620)
...+..|.-+|.+|++++|++++++++. |++|.-|++.+|+.. .. - ++|.+.|.+++.
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask----~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASK----DGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCC----CcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 4567789999999999999999999998 899999999887632 00 1 379999999999
Q ss_pred eeCCCeEEEe--CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEE
Q 000355 1324 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1401 (1620)
Q Consensus 1324 ~~~~~~laS~--DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1401 (1620)
++++.+++++ |..|.|||..+.+.++++.+|. +.|.+++|.
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr------------------------------~~V~~L~fr------- 253 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHR------------------------------GAVSSLAFR------- 253 (479)
T ss_pred cCCCcEEEecCCCceEEEecCcccchhhcccccc------------------------------cceeeeeee-------
Confidence 9999999766 9999999999999988887653 334444443
Q ss_pred EEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEE
Q 000355 1402 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1481 (1620)
Q Consensus 1402 ~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lw 1481 (1620)
.....+++++.|.+|++|++.....+.++-+|... |.+|... .-...+-+|+.|+++++|
T Consensus 254 ---~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~------v~~IdaL-----------~reR~vtVGgrDrT~rlw 313 (479)
T KOG0299|consen 254 ---KGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG------VLGIDAL-----------SRERCVTVGGRDRTVRLW 313 (479)
T ss_pred ---cCccceeeeecCCceEEEehhHhHHHHHHhCCccc------eeeechh-----------cccceEEeccccceeEEE
Confidence 34678999999999999999988888888776553 4444432 123466677799999999
Q ss_pred ECCCCcEEEEEEccCCcEEEEEeCCCCEEEEEeCCCcEEEEECCCCCCCCCeEee-cC-----------CCCEEE--Eee
Q 000355 1482 DVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK-GH-----------TNGISG--FSV 1547 (1620)
Q Consensus 1482 D~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~-gH-----------~~~V~a--fSp 1547 (1620)
++. -+..-.+.+|.+.+-|++.-|...++|||.||.|.+|++.+.+ ++++.+ .| ..+|++ ..|
T Consensus 314 Ki~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKk--plf~~~~AHgv~~~~~~~~~~~Witsla~i~ 390 (479)
T KOG0299|consen 314 KIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKK--PLFTSRLAHGVIPELDPVNGNFWITSLAVIP 390 (479)
T ss_pred ecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccC--ceeEeeccccccCCccccccccceeeeEecc
Confidence 994 3444567889999999996677789999999999999998863 333322 12 226664 778
Q ss_pred cCCEEEEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEE-eCCC
Q 000355 1548 WGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG-TEDG 1614 (1620)
Q Consensus 1548 dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasg-s~DG 1614 (1620)
...+++|||.+| |++|.++. |.- ...-+++. ...+.|++++|+++|+.+++| |-..
T Consensus 391 ~sdL~asGS~~G~vrLW~i~~-----g~r--~i~~l~~l----s~~GfVNsl~f~~sgk~ivagiGkEh 448 (479)
T KOG0299|consen 391 GSDLLASGSWSGCVRLWKIED-----GLR--AINLLYSL----SLVGFVNSLAFSNSGKRIVAGIGKEH 448 (479)
T ss_pred cCceEEecCCCCceEEEEecC-----Ccc--ccceeeec----ccccEEEEEEEccCCCEEEEeccccc
Confidence 899999999999 99999872 211 11222222 245679999999999965554 4443
No 493
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-22 Score=241.35 Aligned_cols=201 Identities=17% Similarity=0.172 Sum_probs=164.3
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.++.++.+.||+|+||+|++|...... .+...||||.++.+.... ...+|+ +|+.+|.+|+|||+|+|
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~ps---gk~V~VAVKclr~d~l~~-~mddfl--------rEas~M~~L~H~hliRL 176 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPS---GKHVNVAVKCLRDDSLNA-IMDDFL--------REASHMLKLQHPHLIRL 176 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCC---CcEEeEEEEeccCCccch-hHHHHH--------HHHHHHHhccCcceeEE
Confidence 456777899999999999998864322 356789999998865543 556777 99999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
||+..+ ..+.||||+++ |+|.+.|+......|.......|+.||+.||.||.++++|||||-..|||+.... .+||
T Consensus 177 yGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--tVKI 253 (1039)
T KOG0199|consen 177 YGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--TVKI 253 (1039)
T ss_pred eeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc--eeee
Confidence 999987 67899999999 7999999976677788888888999999999999999999999999999999877 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+||||.|..............+. -...|.|||.+....++.++|.|..|. +.||++.
T Consensus 254 ~DFGLmRaLg~ned~Yvm~p~rk--------vPfAWCaPEsLrh~kFShaSDvWmyGV-TiWEMFt 310 (1039)
T KOG0199|consen 254 CDFGLMRALGENEDMYVMAPQRK--------VPFAWCAPESLRHRKFSHASDVWMYGV-TIWEMFT 310 (1039)
T ss_pred ecccceeccCCCCcceEecCCCc--------CcccccCHhHhccccccccchhhhhhh-hHHhhhc
Confidence 99999997655443332221111 233599999999999999999999993 2244443
No 494
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.87 E-value=3.4e-22 Score=235.75 Aligned_cols=207 Identities=15% Similarity=0.192 Sum_probs=160.8
Q ss_pred eeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccceeeE
Q 000355 106 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 185 (1620)
Q Consensus 106 y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l~~~ 185 (1620)
.++.+.||+|.||.||+|...-.. ....-.||||.-+.+-. ....+.|+ .|..+|+.++|||||+|+|+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~--kge~iaVAvKtCK~d~t-~d~tekfl--------qEa~iMrnfdHphIikLIGv 459 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPE--KGERIAVAVKTCKTDCT-PDDTEKFL--------QEASIMRNFDHPHIIKLIGV 459 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccc--cCcceeeeeehhccCCC-hhhHHHHH--------HHHHHHHhCCCcchhheeee
Confidence 345689999999999999853221 12334689998876533 34466777 89999999999999999999
Q ss_pred EEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEEeec
Q 000355 186 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 264 (1620)
Q Consensus 186 ~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL~DF 264 (1620)
+.. ...|||||.++ |.|..+++. +...++......|++||+.||.|||+++.|||||-..|||+.+.. -+||+||
T Consensus 460 ~~e-~P~WivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--CVKLaDF 535 (974)
T KOG4257|consen 460 CVE-QPMWIVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--CVKLADF 535 (974)
T ss_pred eec-cceeEEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--eeeeccc
Confidence 875 46899999999 899999985 345678888888999999999999999999999999999999988 6999999
Q ss_pred CCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHhh-hhcccCCCCC
Q 000355 265 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLF-LNKLAGRRWG 338 (1620)
Q Consensus 265 Gla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~~-ln~~~gRs~~ 338 (1620)
|++|......-.... ... -..-|||||-+.-..++.++|+|..|.-. ||.|+. ..+|.|-..+
T Consensus 536 GLSR~~ed~~yYkaS-~~k---------LPIKWmaPESINfRrFTtASDVWMFgVCm-WEIl~lGvkPfqgvkNs 599 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKAS-RGK---------LPIKWMAPESINFRRFTTASDVWMFGVCM-WEILSLGVKPFQGVKNS 599 (974)
T ss_pred chhhhccccchhhcc-ccc---------cceeecCccccchhcccchhhHHHHHHHH-HHHHHhcCCcccccccc
Confidence 999976543221110 111 13459999999999999999999999433 666654 3445544433
No 495
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.1e-19 Score=190.75 Aligned_cols=294 Identities=18% Similarity=0.187 Sum_probs=222.2
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCC------CC--------eE-EEEEecCCcceeEEEEee
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT------RI--------NC-VSGYYGHEEVVNDICVLS 1325 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~------tg--------~~-l~~l~gH~~~V~sV~f~~ 1325 (1620)
++.+|+ -+.+|++|+|+|.|.+.+.||. .++.||.... .+ .. -+.-+-|.+.|.|++|+|
T Consensus 25 ~i~~l~-dsqairav~fhp~g~lyavgsn----skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 25 AINILE-DSQAIRAVAFHPAGGLYAVGSN----SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred EEEEec-chhheeeEEecCCCceEEeccC----CceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 455554 5678999999999999999997 7899987532 11 01 122356899999999999
Q ss_pred CCCeEE--EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEE
Q 000355 1326 SSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH 1403 (1620)
Q Consensus 1326 ~~~~la--S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~ 1403 (1620)
.|..++ |.|++|++--.+...+. ..+|. +..+.|.+.|..++|-...
T Consensus 100 ~geliatgsndk~ik~l~fn~dt~~--~~g~d-----------------------le~nmhdgtirdl~fld~~------ 148 (350)
T KOG0641|consen 100 CGELIATGSNDKTIKVLPFNADTCN--ATGHD-----------------------LEFNMHDGTIRDLAFLDDP------ 148 (350)
T ss_pred ccCeEEecCCCceEEEEeccccccc--ccCcc-----------------------eeeeecCCceeeeEEecCC------
Confidence 999994 55999999876544331 12221 2344566777777774321
Q ss_pred ecCCCEEEEE-ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEE
Q 000355 1404 IECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1482 (1620)
Q Consensus 1404 s~dg~~lasg-s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD 1482 (1620)
...|..++++ ..|..|.+-|..+|+..+.+.+|.+- |.++- +++|-.+++|+.|.+|++||
T Consensus 149 ~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtgh------ilaly------------swn~~m~~sgsqdktirfwd 210 (350)
T KOG0641|consen 149 ESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGH------ILALY------------SWNGAMFASGSQDKTIRFWD 210 (350)
T ss_pred CcCceEEEecCCCcceEEEeecCCCCcceeecCCccc------EEEEE------------EecCcEEEccCCCceEEEEe
Confidence 1124556654 45888999999999999999987653 33332 25667999999999999999
Q ss_pred CCCCcEEEEEE--cc-----CCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEE
Q 000355 1483 VRSGNVIASWR--AH-----DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDV 1552 (1620)
Q Consensus 1483 ~~tg~~i~~l~--gH-----~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~L 1552 (1620)
+|-..++.++. -| +..|.+|+ .|.|++|+||-.|.+..+||++.+ ..+..+..|+..|.| |||...++
T Consensus 211 lrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~yl 288 (350)
T KOG0641|consen 211 LRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAHYL 288 (350)
T ss_pred eeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCceEE
Confidence 99998888874 23 25688999 999999999999999999999998 667789999999997 99999999
Q ss_pred EEEeCCc-eEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1553 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1553 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
.+||.|. |++-|+.. +...+. ... ..+ .|...+-.+.|+|+.--|++.|.|.++.+|.
T Consensus 289 lt~syd~~ikltdlqg--dla~el----~~~---vv~-ehkdk~i~~rwh~~d~sfisssadkt~tlwa 347 (350)
T KOG0641|consen 289 LTCSYDMKIKLTDLQG--DLAHEL----PIM---VVA-EHKDKAIQCRWHPQDFSFISSSADKTATLWA 347 (350)
T ss_pred EEecccceEEEeeccc--chhhcC----ceE---EEE-eccCceEEEEecCccceeeeccCcceEEEec
Confidence 9999998 99999873 222221 111 111 3777888999999999999999999999994
No 496
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.87 E-value=1.2e-21 Score=230.89 Aligned_cols=193 Identities=13% Similarity=0.147 Sum_probs=159.2
Q ss_pred CCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhccCCcccccce
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~l~HpNIv~l 182 (1620)
.+.|+..+.||+|+||.||++.+. .++..+++|.+..... ....+. +|+++++.++|+||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR------ATGKEVAIKKMRLRKQ---NKELII--------NEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc------cCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHCCCCCeeEE
Confidence 567889999999999999999862 2568899999875432 233344 89999999999999999
Q ss_pred eeEEEeCCEEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCceEecCCCceEEEE
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~~~~~lKL 261 (1620)
++.+...+..|+|+||++ ++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++ .+||
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~--~~~l 157 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG--SVKL 157 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC--CEEE
Confidence 999999999999999999 59999998432 3789999999999999999999999999999999999999998 8999
Q ss_pred eecCCcccCCCCCcccCCCCCCccceecccccCccchhhhcccccccccccccccccccchHHHHh
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 327 (1620)
Q Consensus 262 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~~~d~W~~G~isnfeyL~ 327 (1620)
+|||++......... .....++..|+|||++.+..++.++|.|+.|.+. |+++.
T Consensus 158 ~d~~~~~~~~~~~~~-----------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil-~~l~~ 211 (286)
T cd06614 158 ADFGFAAQLTKEKSK-----------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMC-IEMAE 211 (286)
T ss_pred Cccchhhhhccchhh-----------hccccCCcccCCHhHhcCCCCCCccccHHHHHHH-HHHHh
Confidence 999998743211100 0112256789999999988899999999999776 55443
No 497
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.1e-20 Score=205.16 Aligned_cols=293 Identities=15% Similarity=0.199 Sum_probs=198.3
Q ss_pred eEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCe-----EEEEEecCCcceeEEEEeeCCCeE-EEe--
Q 000355 1262 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN-----CVSGYYGHEEVVNDICVLSSSGRI-ASC-- 1333 (1620)
Q Consensus 1262 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~-----~l~~l~gH~~~V~sV~f~~~~~~l-aS~-- 1333 (1620)
+.+|+||.+.|++++|+.||++|+|++. |++||||++.+-+ |++.-- --+--+.|.|.|+..-+ +++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~----Dr~Ir~w~~~DF~~~eHr~~R~nv-e~dhpT~V~FapDc~s~vv~~~~ 153 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISG----DRSIRLWDVRDFENKEHRCIRQNV-EYDHPTRVVFAPDCKSVVVSVKR 153 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeC----CceEEEEecchhhhhhhhHhhccc-cCCCceEEEECCCcceEEEEEcc
Confidence 4689999999999999999999999998 9999999997632 222110 11245778898887765 555
Q ss_pred CCcEEEEeCCCCceEEEEeccCCccccccCCCCCcccccccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEE
Q 000355 1334 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1413 (1620)
Q Consensus 1334 DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasg 1413 (1620)
..++++|.+...+- ..+..+. .+ .. .. --...|.-. +..+.+...+.+|+++
T Consensus 154 g~~l~vyk~~K~~d-G~~~~~~-------v~------~D--~~--~f~~kh~v~----------~i~iGiA~~~k~imsa 205 (420)
T KOG2096|consen 154 GNKLCVYKLVKKTD-GSGSHHF-------VH------ID--NL--EFERKHQVD----------IINIGIAGNAKYIMSA 205 (420)
T ss_pred CCEEEEEEeeeccc-CCCCccc-------cc------cc--cc--ccchhcccc----------eEEEeecCCceEEEEe
Confidence 56777776532111 0000000 00 00 00 000011112 2234444568899999
Q ss_pred ECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECC---CCc---
Q 000355 1414 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR---SGN--- 1487 (1620)
Q Consensus 1414 s~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~---tg~--- 1487 (1620)
+.|.+|-+||++ |+.+..+...... -. -...+|+|.++|+++-.-.|++|.+- .|+
T Consensus 206 s~dt~i~lw~lk-Gq~L~~idtnq~~------n~-----------~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqe 267 (420)
T KOG2096|consen 206 SLDTKICLWDLK-GQLLQSIDTNQSS------NY-----------DAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQE 267 (420)
T ss_pred cCCCcEEEEecC-Cceeeeecccccc------cc-----------ceeeCCCCcEEEEecCCCCceEEEEEeccCcchhh
Confidence 999999999998 8888777643221 01 12234888999999999999999874 332
Q ss_pred --EEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCC--CCCCeEeec--------CCCCEE-EEeecCCEEE
Q 000355 1488 --VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKG--------HTNGIS-GFSVWGQDVI 1553 (1620)
Q Consensus 1488 --~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~g--------H~~~V~-afSpdg~~La 1553 (1620)
.+..++||...|...+ +++...++|.|.||+++|||+.-.. .+-.++++. -..++. +++|.|+.||
T Consensus 268 v~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA 347 (420)
T KOG2096|consen 268 VKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLA 347 (420)
T ss_pred hhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEE
Confidence 4566889999999999 9999999999999999999975311 111222221 123444 6999999999
Q ss_pred EEeCCceEEEeccCCCCCCCcceeeccceeeecCCCCccccEEEEEEecCCCEEEEEeCCCcEEEc
Q 000355 1554 SISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1619 (1620)
Q Consensus 1554 Sgs~D~I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~V~svafsPdg~lLasgs~DG~IrlW 1619 (1620)
.+....+.++..+ +|.......+ -|...|++++|+|+|++++|+| |..++++
T Consensus 348 ~s~gs~l~~~~se-----~g~~~~~~e~--------~h~~~Is~is~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 348 VSFGSDLKVFASE-----DGKDYPELED--------IHSTTISSISYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred eecCCceEEEEcc-----cCccchhHHH--------hhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence 9887779999865 3332111122 3788999999999999999998 6666663
No 498
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.86 E-value=2e-20 Score=201.31 Aligned_cols=268 Identities=14% Similarity=0.099 Sum_probs=212.9
Q ss_pred cccCCCceec--cCCCCCCCCCCeEEEEcCCCCEEEEeCC-Ccee--EEeecccCcEEEEEEccCC-CEEEEeccCCCCC
Q 000355 1221 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASIL--SSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFK 1294 (1620)
Q Consensus 1221 l~gH~~~V~~--~Spdg~~~~~~~lasgS~D~~i~lWd~~-g~~l--~tl~gH~~~V~svafspdg-~~LaSgs~d~~~D 1294 (1620)
+.+|...|.+ +..+|.. +++||.|+++++|+++ +..+ -..+||++.|-.++|+|.. ..+++++. |
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~-----lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~----d 86 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTK-----LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASG----D 86 (313)
T ss_pred hhhhhhcceEEEEcccCce-----eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecC----C
Confidence 3455555554 6677776 9999999999999998 3332 3467999999999998864 68888887 8
Q ss_pred cEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCeE-E-EeCCcEEEEeCCCCceEEEEeccCCccccccCCCCCccccc
Q 000355 1295 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-A-SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1372 (1620)
Q Consensus 1295 gtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~l-a-S~DgtV~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~ 1372 (1620)
++|++||..+++|......-.+.++ +.|+|+|+++ + ..|..|.+.|.++-+.....+...
T Consensus 87 k~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~----------------- 148 (313)
T KOG1407|consen 87 KTIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKF----------------- 148 (313)
T ss_pred ceEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccc-----------------
Confidence 9999999999999998876556655 6788999998 3 349999999999877665444211
Q ss_pred ccccccccccCCCCCeEEEeecCCceEEEEEecCCCEEEEEECCCcEEEEECCCCceeEEeeCCCcccccCCccceEeee
Q 000355 1373 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1452 (1620)
Q Consensus 1373 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs~DgtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1452 (1620)
.+..+.++.+++.++..++.|+|.+.....-+++.+++.|.. ...||.|
T Consensus 149 ------------------------e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s------nCicI~f- 197 (313)
T KOG1407|consen 149 ------------------------EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS------NCICIEF- 197 (313)
T ss_pred ------------------------eeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCc------ceEEEEE-
Confidence 123344555688888888889999999888888888886542 2344444
Q ss_pred CCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEEEEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCC
Q 000355 1453 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ 1531 (1620)
Q Consensus 1453 ~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~ 1531 (1620)
+|+|+++|+|+.|..+.+||+...-+++.+..++-+|+.+. +.||++|||||+|..|-|=++.+| ..
T Consensus 198 ----------~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetG--d~ 265 (313)
T KOG1407|consen 198 ----------DPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETG--DR 265 (313)
T ss_pred ----------CCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccC--Ce
Confidence 37789999999999999999999889999999999999999 999999999999999999999998 55
Q ss_pred CeEeecCCCCEE--EEeecCCEEEEEeCCc
Q 000355 1532 PTVFKGHTNGIS--GFSVWGQDVISISNNK 1559 (1620)
Q Consensus 1532 ~~~l~gH~~~V~--afSpdg~~LaSgs~D~ 1559 (1620)
+..+. +.++.. +|+|...+||-+++|+
T Consensus 266 ~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 266 VWEIP-CEGPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred EEEee-ccCCceeEEecCCCceeeEEecCC
Confidence 55554 334443 6999999999988765
No 499
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=6.1e-22 Score=228.28 Aligned_cols=211 Identities=16% Similarity=0.103 Sum_probs=156.0
Q ss_pred cCCCeeeeeceeeeeeEEEEEEEecccccccccccEEEEEEecCCCCChhhHHHHHHhcCCCcHhHHHhhc--cCCcccc
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG--CLRHPNV 179 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~--~l~HpNI 179 (1620)
+..+.++.+.||+|.||+||+|. +.|+.||||++... +...+. ||.+|.+ .|+|+||
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~--------wrGe~VAVKiF~sr-----dE~SWf--------rEtEIYqTvmLRHENI 267 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGR--------WRGEDVAVKIFSSR-----DERSWF--------RETEIYQTVMLRHENI 267 (513)
T ss_pred hhheeEEEEEecCccccceeecc--------ccCCceEEEEeccc-----chhhhh--------hHHHHHHHHHhccchh
Confidence 44578899999999999999988 57899999998542 222333 6666665 4599999
Q ss_pred cceeeEEEeCC----EEEEEEeCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCceecCCCC
Q 000355 180 APVLGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCP 246 (1620)
Q Consensus 180 v~l~~~~~~~~----~~~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~--------~gIiHRDLKP 246 (1620)
+.+++.-..++ .+|||.+|.+ |+|+|+|. ...++......++.-+++||+|||. -.|.|||||.
T Consensus 268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hhhhhccccCCCceEEEEEeeecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 99999876554 8999999999 89999998 3578889999999999999999997 3599999999
Q ss_pred CceEecCCCceEEEEeecCCcccCCCC-CcccCCCCCCccceecccccCccchhhhccccccccc------ccccccccc
Q 000355 247 SNVLLTDSCWSWLYICDKPLVGFNSIA-DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS------QFNRWWRGE 319 (1620)
Q Consensus 247 ~NILl~~~~~~~lKL~DFGla~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~Y~APEv~~~~~y~~------~~d~W~~G~ 319 (1620)
.|||+..++ .+-|+|+|||-.-... ........++. ||..|||||++.+.--.. .+|+|+.|-
T Consensus 345 KNILVKkn~--~C~IADLGLAv~h~~~t~~idi~~N~rV--------GTKRYMAPEvLdetin~~~Fesyk~ADIYafgL 414 (513)
T KOG2052|consen 345 KNILVKKNG--TCCIADLGLAVRHDSDTDTIDIPPNPRV--------GTKRYMAPEVLDETINMKHFESYKRADIYAFGL 414 (513)
T ss_pred ccEEEccCC--cEEEeeceeeEEecccCCcccCCCCCcc--------ceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence 999999999 8999999999743222 22333344443 799999999987543333 456666663
Q ss_pred cchHHHHhhhhcccCCCCCCCcCCcccceee
Q 000355 320 LSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 350 (1620)
Q Consensus 320 isnfeyL~~ln~~~gRs~~dl~q~pv~pwv~ 350 (1620)
+. +|..---+. .| ..+-.|-|.++||=
T Consensus 415 Vl-WEiarRc~~-gg--i~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 415 VL-WEIARRCES-GG--IVEEYQLPYYDVVP 441 (513)
T ss_pred HH-HHHHHHhhc-CC--EehhhcCCcccCCC
Confidence 32 332221111 22 34445666666665
No 500
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.86 E-value=1.8e-20 Score=219.77 Aligned_cols=325 Identities=16% Similarity=0.175 Sum_probs=235.4
Q ss_pred eeEEeecccCcEEEEEEccCCCEEEEeccCCCCCcEEEEEeCCCCeEEEEEecCCcceeEEEEeeCCCe--E-EEeCCcE
Q 000355 1261 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR--I-ASCDGTL 1337 (1620)
Q Consensus 1261 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrLWdl~tg~~l~~l~gH~~~V~sV~f~~~~~~--l-aS~DgtV 1337 (1620)
+-..++||++.|+|+...|.|.+|+|||. ||+||||.+.||.|++++. ..+.|.||+|+|.+.. | ++.++.+
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsd----DGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~ 466 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSD----DGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECV 466 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCC----CCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCce
Confidence 55678999999999999999999999998 9999999999999999887 5679999999987664 3 4556668
Q ss_pred EEEeCCCCceEEEEeccCCccccccCCCCCccccccccccccccc---CCCCCeEEEeecCCceEEEEEecCCCEEEEEE
Q 000355 1338 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN---TLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1414 (1620)
Q Consensus 1338 ~IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~---~~s~~v~sv~f~~~~vt~v~~s~dg~~lasgs 1414 (1620)
.|-+..-|..+..-... . .....+.. ........++... ....+|+.+--+++.+..+.|+..|.++++..
T Consensus 467 ~ivnp~~G~~~e~~~t~--e-ll~~~~~~---~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~ 540 (733)
T KOG0650|consen 467 LIVNPIFGDRLEVGPTK--E-LLASAPNE---SEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVM 540 (733)
T ss_pred EEeCccccchhhhcchh--h-hhhcCCCc---cCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEec
Confidence 88887666332211100 0 00000000 0000111122222 23444666666777899999999999999877
Q ss_pred CC---CcEEEEECCCCceeEEeeCCCcccccCCccceEeeeCCCccccCcccCCCCEEEEEecCCcEEEEECCCCcEEEE
Q 000355 1415 GN---GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1491 (1620)
Q Consensus 1415 ~D---gtVrlwDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~~~~g~~p~g~~LasGs~Dg~I~lwD~~tg~~i~~ 1491 (1620)
.+ ..|.|.++...+...-|+.. ...|.++.|.|... ++++++. ..|++||+..+..+..
T Consensus 541 ~~~~~~~VliHQLSK~~sQ~PF~ks------kG~vq~v~FHPs~p-----------~lfVaTq-~~vRiYdL~kqelvKk 602 (733)
T KOG0650|consen 541 PDSGNKSVLIHQLSKRKSQSPFRKS------KGLVQRVKFHPSKP-----------YLFVATQ-RSVRIYDLSKQELVKK 602 (733)
T ss_pred cCCCcceEEEEecccccccCchhhc------CCceeEEEecCCCc-----------eEEEEec-cceEEEehhHHHHHHH
Confidence 64 46788888766544334321 33478888876553 5555553 5899999998888888
Q ss_pred EEccCCcEEEEE-eCCCCEEEEEeCCCcEEEEECCCCCCCCCeEeecCCCCEEE--EeecCCEEEEEeCCc-eEEEeccC
Q 000355 1492 WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSK 1567 (1620)
Q Consensus 1492 l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~ 1567 (1620)
+.....+|.+++ +|+|..|+.||.|+.+..+|+.-+. +...+++-|...|.+ |++.-.+++||++|+ +.|+--..
T Consensus 603 L~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlss-kPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~V 681 (733)
T KOG0650|consen 603 LLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSS-KPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMV 681 (733)
T ss_pred HhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCc-chhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeee
Confidence 877778999999 9999999999999999999997653 556688999999985 777778899999999 87776443
Q ss_pred CCCCCCcceeeccceeeecCCCCccc----cEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000355 1568 SADEDGQHRLVPQKLYMVDNGAKNLS----VLSSISILPFSRLFLVGTEDGYLRLCC 1620 (1620)
Q Consensus 1568 ~~~~~g~~~~~~~kl~~~~~g~~h~~----~V~svafsPdg~lLasgs~DG~IrlWd 1620 (1620)
-.+.-.++.+++.+... +|.. .|.++.|+|...+|.++|.||+||+|+
T Consensus 682 Y~Dl~qnpliVPlK~L~-----gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlfT 733 (733)
T KOG0650|consen 682 YNDLLQNPLIVPLKRLR-----GHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLFT 733 (733)
T ss_pred ehhhhcCCceEeeeecc-----CceeecccceEeecccCCCceEEecCCCceEEeeC
Confidence 33444444455554432 3444 499999999999999999999999996
Done!