Query 000355
Match_columns 1620
No_of_seqs 1126 out of 7920
Neff 7.4
Searched_HMMs 29240
Date Wed Mar 27 00:00:23 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/000355.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_4-8//hhsearch_pdb/000355hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t77_A Lipopolysaccharide-resp 1.0 1 1 584.2 8.4 236 309-544 134-414 (414)
2 4b9d_A Serine/threonine-protei 1.0 1 1 401.8 22.3 179 99-304 19-198 (350)
3 4b99_A Mitogen-activated prote 1.0 1 1 398.2 25.4 202 101-328 51-259 (398)
4 4fie_A Serine/threonine-protei 1.0 1 1 394.6 26.1 170 103-304 150-320 (423)
5 4fih_A Serine/threonine-protei 1.0 1 1 393.5 24.5 170 103-304 73-243 (346)
6 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 392.9 21.0 175 103-304 31-207 (311)
7 3ubd_A Ribosomal protein S6 ki 1.0 1 1 384.0 18.4 176 103-304 23-199 (304)
8 3hyh_A Carbon catabolite-derep 1.0 1 1 382.5 21.1 172 103-304 12-184 (275)
9 3v5w_A G-protein coupled recep 1.0 1 1 382.3 20.8 178 100-304 185-363 (689)
10 4g3f_A NF-kappa-beta-inducing 1.0 1 1 380.9 22.9 173 102-304 56-229 (336)
No 1
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=1.00 E-value=1 Score=584.22 Aligned_cols=236 Identities=34% Similarity=0.576 Sum_probs=211.4
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-CCCCCC-CCCCCCCCCCCCCCHHHHHCCCC-CCCCCC
Q ss_conf 322234323433537888630014599989886773235263-068898-99899978789932776501543-211114
Q 000355 309 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKSKWRLAKGDE-QLDFTY 385 (1620)
Q Consensus 309 ~~~~d~W~~g~i~nf~yL~~ln~~~grs~~dl~~~pv~pwv~-d~~~~~-~~~~~~~~rdl~k~~~~~~~~~~-~~~~~~ 385 (1620)
...+++|+.|+||||+|||.||.+||||++|++||||||||+ ||+++. |+++|+.||||+||||++++++. +++.+|
T Consensus 134 ~~~t~~W~~g~iSNFeYLm~LN~~aGRs~nDl~qYPVFPWVl~dy~s~~ldl~~~~~~RDLskpigaln~~r~~~~~~ry 213 (414)
T 1t77_A 134 SNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERY 213 (414)
T ss_dssp CSHHHHHHTTSSCHHHHHHHHHHHHTCCSSCGGGCCCBCCCBCCCSSSSCCTTCGGGBCCTTSCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH
T ss_conf 06778875387548999999998738876654558623605436766444667864404588753332987999999999
Q ss_pred CC----CCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCC-C-CCCCCCCHHHHHHC------CCCCCCCCCCCCCC
Q ss_conf 67----8989766856556430000122348647999975124-6-89994106887312------98873355765688
Q 000355 386 SS----SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV-Y-EPNEYPSTMQRLYQ------WTPDECIPEFYCDP 453 (1620)
Q Consensus 386 ~~----~~~p~~~~~~~~~~~~v~~y~~r~~p~~~l~~~~~~~-~-~~~~~~~~~~~~~~------~~~~eliPef~~~p 453 (1620)
+. ...|+||+++|+++++|++||+|++|||++++.+|++ | .|++.+.++.+.|+ .++||||||||++|
T Consensus 214 ~~~~~~~~~~f~ygshyS~~~~V~~yL~R~ePft~~~~~lq~g~fD~~dR~F~Si~~~w~~~~~~~~d~kElIPEFf~~P 293 (414)
T 1t77_A 214 ESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLP 293 (414)
T ss_dssp HHCCCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHHHCTTCCCCBCGGGGTCG
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCH
T ss_conf 75013689976558877788999998705785789999874697678761155699999987346898454492320583
Q ss_pred CCCCCCC----------CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 4443399----------999971049999997899999998525568874488840000234878344671399998899
Q 000355 454 QIFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSS 523 (1620)
Q Consensus 454 ~~~~~~~----------~~~~dv~lP~Wa~~~~~fi~~~r~aLEs~~Vs~~l~~WIDlifG~k~~g~~a~~~~nv~~~~~ 523 (1620)
|||+|.+ ..|+||+|||||+||++||++||+||||+|||+|||+||||||||||+|++|++|+|||||++
T Consensus 294 e~l~N~n~~~lG~~~~g~~v~DV~LP~Wa~sp~~FI~~~R~aLES~~VS~~Lh~WIDLiFGykq~G~~Av~a~Nvf~~lt 373 (414)
T 1t77_A 294 EMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLT 373 (414)
T ss_dssp GGGSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGG
T ss_pred HHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCE
T ss_conf 76435567765646689877753679998998999999999971828664143443554074568988995579612200
Q ss_pred CCCC------------------CCCCC--CCCCCCCCCCCC
Q ss_conf 9987------------------54677--564467888899
Q 000355 524 EPTK------------------PKSVG--RLQLFTQPHPVR 544 (1620)
Q Consensus 524 ~~~~------------------~~~~g--~~qlf~~pHp~r 544 (1620)
|+.. ..++| |.|||++|||+|
T Consensus 374 Y~~~vd~~~i~d~~~~~a~~~~i~~fGQ~P~QLF~~pHP~R 414 (414)
T 1t77_A 374 YEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 414 (414)
T ss_dssp STTSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 06743423369878999999999976998346516899899
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=401.80 Aligned_cols=179 Identities=17% Similarity=0.150 Sum_probs=152.4
Q ss_pred CCCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
Q ss_conf 23337772364015654007999999436666446630899998127877706679898840899175888502488655
Q 000355 99 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 178 (1620)
Q Consensus 99 ~~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN 178 (1620)
....+++|++++.||+|+||+||+|++. .+++.||||++............+. +|+.+|+.|+|||
T Consensus 19 ~f~sme~Y~~~~~lG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~il~~l~Hpn 84 (350)
T 4b9d_A 19 YFQSMEKYVRLQKIGEGSFGKAILVKST------EDGRQYVIKEINISRMSSKEREESR--------REVAVLANMKHPN 84 (350)
T ss_dssp BCSCCCCEEEEEEC------CEEEEEET------TTCCEEEEEEEECTTSCHHHHHHHH--------HHHHHHHHCCCTT
T ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCC
T ss_conf 7785125588479702779399999988------9998999999865878979999999--------9999998779989
Q ss_pred CCCEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCE
Q ss_conf 1350069996997999972799-898989862999999999999999999999999993991304779995375579933
Q 000355 179 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 257 (1620)
Q Consensus 179 Iv~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~ 257 (1620)
||+++++|++++.+|||||||+ |+|.++|...+...+++..++.|+.||+.||.|||+++|+||||||+|||++.++
T Consensus 85 IV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-- 162 (350)
T 4b9d_A 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-- 162 (350)
T ss_dssp BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC--
T ss_pred CCCEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCC--
T ss_conf 891999999899999999488998399999973899997899999999999999999989915135978997987899--
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 79995047865578777555888888551123666675420000002
Q 000355 258 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 258 ~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
.+||+|||+|+....... ....+.||+.|||||++.
T Consensus 163 ~vKl~DFGla~~~~~~~~-----------~~~~~~GT~~YmAPE~l~ 198 (350)
T 4b9d_A 163 TVQLGDFGIARVLNSTVE-----------LARACIGTPYYLSPEICE 198 (350)
T ss_dssp CEEECSTTEESCCCHHHH-----------HHHHHHSCCTTCCHHHHT
T ss_pred CEEECCCCCCEEECCCCC-----------CCCCCCCCCCCCCHHHHC
T ss_conf 989764652144068854-----------101457883603999987
No 3
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=398.19 Aligned_cols=202 Identities=20% Similarity=0.262 Sum_probs=161.1
Q ss_pred CCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33777236401565400799999943666644663089999812787770667989884089917588850248865513
Q 000355 101 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 180 (1620)
Q Consensus 101 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv 180 (1620)
.+.++|++++.||+|+||+||+|++. .+|+.||||++..........+.++ +|+.+|+.++|||||
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~------~t~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv 116 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRR------LTGQQVAIKKIPNAFDVVTNAKRTL--------RELKILKHFKHDNII 116 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEETTTTSSHHHHHHHH--------HHHHHHHHCCCTTBC
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCCCHHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 77897489889842608499999998------9998999999874003468899999--------999999866799954
Q ss_pred CEEEEEEEC------CEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 500699969------97999972799898989862999999999999999999999999993991304779995375579
Q 000355 181 PVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 254 (1620)
Q Consensus 181 ~l~~~~~~~------~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~ 254 (1620)
++++++... +.+|||||||+|+|.+++. ..+.+++..++.|++||+.||.|||++||+||||||+|||++.+
T Consensus 117 ~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~ 194 (398)
T 4b99_A 117 AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 194 (398)
T ss_dssp CEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred EEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 1765552035546688799998379998899998--65999999999999999999999998867678737133542788
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCC-CCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9337999504786557877755588888855112366667542000000255-5532223432343353788863
Q 000355 255 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLF 328 (1620)
Q Consensus 255 ~~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~~d~W~~g~i~nf~yL~~ 328 (1620)
+ .+||+|||+|+......... ........||+.|||||++.+. .|+..+|+|+.|+|. |+.+++
T Consensus 195 ~--~~Ki~DFGla~~~~~~~~~~-------~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il-~ell~G 259 (398)
T 4b99_A 195 C--ELKIGDFGMARGLCTSPAEH-------QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIF-GEMLAR 259 (398)
T ss_dssp C--CEEECCCTTCBCC--------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHH-HHHHHT
T ss_pred C--CEEEEECCEEEECCCCCCCC-------CCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHH-HHHHHC
T ss_conf 8--77872214342134675456-------66656625586764878762788899722211168999-999978
No 4
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=394.57 Aligned_cols=170 Identities=16% Similarity=0.110 Sum_probs=143.4
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.+.|+++++||+|+||+||+|++. .+|+.||||++...+... ...+. +|+.+|+.++|||||++
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~------~tg~~vAiK~i~~~~~~~--~~~~~--------~Ei~il~~l~HpnIV~l 213 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVR------SSGKLVAVKKMDLRKQQR--RELLF--------NEVVIMRDYQHENVVEM 213 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEESTTCSS--GGGHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEECCCCCCEEEEEEEC------CCCCEEEEEEEECCCHHH--HHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 684386169624818489999999------999899999986255468--99999--------99999985799898716
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
+++|.+.+.+|||||||+| +|.++++. +.+++..++.|++||+.||.|||+++||||||||+|||++.+| .+||
T Consensus 214 ~~~~~~~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g--~vKl 288 (423)
T 4fie_A 214 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKL 288 (423)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 8999989999999969899828988761---6989999999999999999999988904465787778985899--9898
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 5047865578777555888888551123666675420000002
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
+|||+|+....... ......||+.|||||++.
T Consensus 289 ~DFGla~~~~~~~~-----------~~~~~~GTp~YmAPEvl~ 320 (423)
T 4fie_A 289 SDFGFCAQVSKEVP-----------RRKSLVGTPYWMAPELIS 320 (423)
T ss_dssp CCCTTCEECCSSCC-----------CBCCCEECTTTCCHHHHT
T ss_pred ECCCCCEECCCCCC-----------CCCCCCCCCCCCCHHHHC
T ss_conf 03726547778876-----------434666474727999977
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=393.50 Aligned_cols=170 Identities=16% Similarity=0.110 Sum_probs=143.1
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
...|+.+++||+|+||+||+|++. .+|+.||||++...+... ...+. +|+.+|+.++|||||++
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~------~tg~~vAiK~i~~~~~~~--~~~~~--------~Ei~il~~l~HpnIV~l 136 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVR------SSGKLVAVKKMDLRKQQR--RELLF--------NEVVIMRDYQHENVVEM 136 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEGGGCSS--GGGGH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEECCCHHH--HHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 575387079602728299999998------999899999985276568--99999--------99999986799899919
Q ss_pred EEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 0699969979999727998-989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
+++|.+++.+|||||||+| +|.+++.. +.+++..++.|++||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 137 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl 211 (346)
T 4fih_A 137 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKL 211 (346)
T ss_dssp EEEEEETTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 9999989999999969899808999871---8989999999999999999999988835562788997887999--8899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 5047865578777555888888551123666675420000002
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
+|||+|+....... ......||+.|||||++.
T Consensus 212 ~DFGla~~~~~~~~-----------~~~~~~GTp~YmAPEvl~ 243 (346)
T 4fih_A 212 SDFGFCAQVSKEVP-----------RRKSLVGTPYWMAPELIS 243 (346)
T ss_dssp CCCTTCEECCSSSC-----------CBCCCCSCGGGCCHHHHT
T ss_pred ECCCCCEECCCCCC-----------CCCCCCCCCCCCCHHHHC
T ss_conf 02757536678877-----------534656275827999977
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=392.88 Aligned_cols=175 Identities=18% Similarity=0.144 Sum_probs=146.2
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 77723640156540079999994366664466308999981278777066-79898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
.++|++++.||+|+||+||+|++. .+++.||+|.+.+....... ...+. +|+.+|+.++|||||+
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~------~~~~~~AiK~i~k~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~ 96 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLAREL------ATSREYAIKILEKRHIIKENKVPYVT--------RERDVMSRLDHPFFVK 96 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHTTCCCTTBCC
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH--------HHHHHHHHCCCCCCCE
T ss_conf 523689889831648499999999------99989999998888877978999999--------9999998679989891
Q ss_pred EEEEEEECCEEEEEEECCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 00699969979999727998-98989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~g-sL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
++++|++++.+|+|||||+| +|.++++ ..+.+++..++.|+.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 97 l~~~~~~~~~~yivmEy~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g--~vK 172 (311)
T 4aw0_A 97 LYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQ 172 (311)
T ss_dssp EEEEEECSSEEEEEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEE
T ss_conf 9999973898999996489989999998--749999999999999999999999988782687878996985898--889
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 95047865578777555888888551123666675420000002
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
|+|||+|+......... ......||+.|||||++.
T Consensus 173 l~DFGla~~~~~~~~~~---------~~~~~~GTp~YmAPEvl~ 207 (311)
T 4aw0_A 173 ITDFGTAKVLSPESKQA---------RANSFVGTAQYVSPELLT 207 (311)
T ss_dssp ECCCTTCEECCTTTTCC---------CBCCCCSCGGGCCHHHHH
T ss_pred EEECCCCEECCCCCCCC---------CCCCCCCCCCCCCHHHHC
T ss_conf 98768750257787765---------436755680307998976
No 7
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=384.02 Aligned_cols=176 Identities=17% Similarity=0.129 Sum_probs=146.3
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 77723640156540079999994366664466308999981278777066798988408991758885024886551350
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 182 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~l 182 (1620)
.++|++++.||+|+||+||+|++... ..+++.||+|.+.+..........+. +|+.+|+.++|||||++
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~---~~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~l 91 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISG---SDARQLYAMKVLKKATLKVRDRVRTK--------MERDILVEVNHPFIVKL 91 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSS---TTTTCEEEEEEEESEEEEEEECC--------------CCCCCCCCTTEECE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCC---CCCCEEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCEE
T ss_conf 55658988972188839999998558---87897999999815776847899999--------99999987799799909
Q ss_pred EEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 069996997999972799-8989898629999999999999999999999999939913047799953755799337999
Q 000355 183 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 183 ~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
+++|++++.+|+|||||+ |+|.+++. +.+.+++..++.|+.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 92 ~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl 167 (304)
T 3ubd_A 92 HYAFQTEGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKL 167 (304)
T ss_dssp EEEEEETTEEEEEECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 999998999999997579988899997--559999999999999999999999977995888878995786899--8876
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 5047865578777555888888551123666675420000002
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
+|||+|+........ .....||+.|||||++.
T Consensus 168 ~DFGla~~~~~~~~~-----------~~~~~GT~~YmAPE~~~ 199 (304)
T 3ubd_A 168 TDFGLSKESIDHEKK-----------AYSFCGTVEYMAPEVVN 199 (304)
T ss_dssp ESSEEEEC-----CC-----------CCSCCCCGGGCCHHHHH
T ss_pred CCCCCCEECCCCCCC-----------CCCCCCCCCCCCHHHHC
T ss_conf 236634332688763-----------04544181507999965
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=382.50 Aligned_cols=172 Identities=20% Similarity=0.228 Sum_probs=146.3
Q ss_pred CCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHH-HHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 777236401565400799999943666644663089999812787770667-9898840899175888502488655135
Q 000355 103 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 103 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
.++|++++.||+|+||+||+|++. .+++.||+|.+.+........ ..+. +|+.+|+.++|||||+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv~ 77 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHT------TTGQKVALKIINKKVLAKSDMQGRIE--------REISYLRLLRHPHIIK 77 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECT------TTCCEEEEEEEECC------CHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred EECEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH--------HHHHHHHHCCCCCCCE
T ss_conf 338689999821768199999999------99989999998378867878999999--------9999998779989992
Q ss_pred EEEEEEECCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 00699969979999727998989898629999999999999999999999999939913047799953755799337999
Q 000355 182 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 261 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iKI 261 (1620)
++++|++++.+|+||||++|+|.+++. ..+.+++..++.+++|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 78 ~~~~~~~~~~~~ivmEy~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~--~vkl 153 (275)
T 3hyh_A 78 LYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL--NVKI 153 (275)
T ss_dssp EEEEEECSSEEEEEEECCCEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC--CEEE
T ss_pred EEEEEEECCEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 999999899899999278997899998--749999999999999999999999988930666875876887999--8999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 5047865578777555888888551123666675420000002
Q 000355 262 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 262 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
+|||+|+....... .....||+.|||||++.
T Consensus 154 ~DFGla~~~~~~~~------------~~~~~GT~~Y~APE~~~ 184 (275)
T 3hyh_A 154 ADFGLSNIMTDGNF------------LKTSCGSPNYAAPEVIS 184 (275)
T ss_dssp CCSSCC---------------------------CTTSCHHHHS
T ss_pred EECCCCEECCCCCC------------CCCEEECCCCCCHHHHC
T ss_conf 45477726678874------------67702893527745506
No 9
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=382.26 Aligned_cols=178 Identities=14% Similarity=0.078 Sum_probs=144.6
Q ss_pred CCCCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCC
Q ss_conf 33377723640156540079999994366664466308999981278777066798988408991758885024886551
Q 000355 100 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 179 (1620)
Q Consensus 100 ~~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI 179 (1620)
...+++|++++.||+|+||+||+|++. .+|..||+|++.+............... .+++.+++.++||||
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~------~tg~~~AiK~i~K~~i~~~~~~~~~~~E----~~~l~ll~~~~HP~I 254 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE----RIMLSLVSTGDCPFI 254 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHHHH----HHHHHHHSSSCCTTB
T ss_pred CCCHHHEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHHHHH----HHHHHHHHHCCCCCE
T ss_conf 995689288889831648399999999------9998999999757882525568999999----999999964899987
Q ss_pred CCEEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 350069996997999972799-8989898629999999999999999999999999939913047799953755799337
Q 000355 180 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 258 (1620)
Q Consensus 180 v~l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~ 258 (1620)
|+++++|++.+.+|+|||||+ |+|.++|. ..+.+++..+++|+.||+.||.|||++|||||||||+|||++.+| +
T Consensus 255 V~l~~~f~~~~~lylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G--~ 330 (689)
T 3v5w_A 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--H 330 (689)
T ss_dssp CCEEEEEECSSEEEEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS--C
T ss_pred EEEEEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCC--C
T ss_conf 179999998998899994689982999998--669999999999999999999999978854168866875980899--8
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 9995047865578777555888888551123666675420000002
Q 000355 259 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 259 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
+||+|||+|+...... .....||+.|||||++.
T Consensus 331 vKL~DFGlA~~~~~~~-------------~~t~~GTp~YmAPEvl~ 363 (689)
T 3v5w_A 331 VRISDLGLACDFSKKK-------------PHASVGTHGYMAPEVLQ 363 (689)
T ss_dssp EEECCCTTCEECSSCC-------------CCSCCSCGGGCCHHHHS
T ss_pred EEECCCCEEEECCCCC-------------CCCCCCCCCCCCHHHHH
T ss_conf 8964565566637898-------------77765786731889984
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=380.89 Aligned_cols=173 Identities=13% Similarity=0.101 Sum_probs=142.3
Q ss_pred CCCCEEEEECEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37772364015654007999999436666446630899998127877706679898840899175888502488655135
Q 000355 102 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 181 (1620)
Q Consensus 102 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIv~ 181 (1620)
..+.|++.++||+|+||+||+|++. .+|+.||||+++..... .+|+.+|+.++|||||+
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~------~~g~~vAiK~i~~~~~~---------------~~E~~il~~l~HpnIV~ 114 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDK------QTGFQCAVKKVRLEVFR---------------VEELVACAGLSSPRIVP 114 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEETTTCC---------------THHHHTTTTCCCTTBCC
T ss_pred CHHHEEECCEECCCCCEEEEEEEEC------CCCCEEEEEEECHHHHH---------------HHHHHHHHHCCCCCCCC
T ss_conf 5335176868513878099999988------99989999997888869---------------99999998579989993
Q ss_pred EEEEEEECCEEEEEEECCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 0069996997999972799-898989862999999999999999999999999993991304779995375579933799
Q 000355 182 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 260 (1620)
Q Consensus 182 l~~~~~~~~~~~LV~E~~~-gsL~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKp~NILi~~~~~~~iK 260 (1620)
++++|.+++.+|||||||+ |+|.++++ ..+.+++..++.|+.|++.||.|||+++|+||||||+|||++.++. ++|
T Consensus 115 l~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~-~vK 191 (336)
T 4g3f_A 115 LYGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS-RAA 191 (336)
T ss_dssp EEEEEEETTEEEEEECCCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC-CEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCC-EEE
T ss_conf 9999998999999996659986999998--7699999999999999999999999889042616778879958999-799
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCC
Q ss_conf 95047865578777555888888551123666675420000002
Q 000355 261 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 304 (1620)
Q Consensus 261 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 304 (1620)
|+|||+|+............ ......||+.|||||++.
T Consensus 192 l~DFGla~~~~~~~~~~~~~------~~~~~~GT~~YmAPE~~~ 229 (336)
T 4g3f_A 192 LCDFGHALCLQPDGLGKSLL------TGDYIPGTETHMAPEVVM 229 (336)
T ss_dssp ECCCTTCEEC------------------CCCCCCGGGCCHHHHT
T ss_pred EEECCCCEECCCCCCCCCEE------CCCCCCCCCCCCCHHHHC
T ss_conf 96278776856787654022------178545580200899988
Done!