Query 000366
Match_columns 1612
No_of_seqs 306 out of 1016
Neff 4.6
Searched_HMMs 29240
Date Tue Mar 26 16:41:49 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000366.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_145-149//hhsearch_pdb/000366hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ioq_A Chaperone protein HTPG; 1.0 1 1 174.1 5.6 226 140-392 5-265 (624)
2 3nwc_A SMC protein; structural 1.0 1 1 173.3 12.2 149 1349-1554 32-182 (189)
3 2cg9_A ATP-dependent molecular 1.0 1 1 168.5 17.0 230 140-394 4-310 (677)
4 1y4s_A Chaperone protein HTPG; 1.0 1 1 165.7 9.6 297 140-548 5-337 (559)
5 3l51_B Structural maintenance 1.0 1 1 164.2 10.9 140 1349-1541 15-160 (166)
6 3l51_A Structural maintenance 1.0 1 1 161.6 13.6 149 1344-1539 8-161 (161)
7 2o1u_A Endoplasmin; GRP94, HSP 1.0 1 1 158.7 10.4 230 140-392 23-286 (666)
8 2gqp_A Endoplasmin; GRP94, HSP 1.0 1 1 144.6 7.7 185 140-346 10-217 (236)
9 3nmq_A Heat shock protein HSP 1.0 1 1 144.6 7.8 182 140-347 17-220 (239)
10 1yc1_A HSP 86, heat shock prot 1.0 1 1 143.1 7.6 183 138-346 44-248 (264)
No 1
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=1.00 E-value=1 Score=174.10 Aligned_cols=226 Identities=17% Similarity=0.223 Sum_probs=141.0
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHHCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 2102588977-8850789-89-9899999994110210002-------------89960799999716985999979999
Q 000366 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1612)
Q Consensus 140 n~~dL~Pd~~-lL~~lg~-~Y-sl~sAIAELVDNSIDA~~~-------------Na~A~~I~I~I~~d~~~I~V~DNG~G 203 (1612)
..+.+..++. +|..++. -| +...+|+|||+||+||... ++...+|.|.++-+...|+|.|||+|
T Consensus 5 e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~a~~~~I~I~~d~~~~~I~I~DnGiG 84 (624)
T 2ioq_A 5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVG 84 (624)
T ss_dssp ----------CCHHHHHHHHSSCTTHHHHHHHHHHHHHHHHHHHHHHTSTTTTTTCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 43320413999999998733798579999999979986565677642681003678874799999689748999989989
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECC--CCEEEEEEEEHH
Q ss_conf 99676966430133354200000-011468999998997653346213456403477999995079--814999997326
Q 000366 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKV--SKEVYTLHLEKE 280 (1612)
Q Consensus 204 Ms~eEL~~~~~wGtiG~S~~R~~-~a~~~Ggk~p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~g--s~~v~~l~Ld~e 280 (1612)
|+.+++.. +|++++.|..+.. .+.. +........||+||+|++ ++|+++++++|.||+.+ ....+.|..+.
T Consensus 85 Mt~edl~~--~l~tiA~Sg~~~f~~~l~--~~~~~~~~~iG~fGvGfy-S~f~VadkV~V~Sr~~~~~~~~~~~w~s~g- 158 (624)
T 2ioq_A 85 MTRDEVID--HLGTIAKSGTKSFLESLG--SDQAKDSQLIGQFGVGFY-SAFIVADKVTVRTRAAGEKPENGVFWESAG- 158 (624)
T ss_dssp CCHHHHHH--HHHHHCC-----------------CCTTHHHHHHHHHH-HHHHHEEEEEEEEECTTSCGGGEEEEEECS-
T ss_pred CCHHHHHH--HHHHHCCCCCHHHHHHHC--CCCCCCCCCCCCCCCCHH-HHHHCCCEEEEEECCCCCCCCEEEEEEEEC-
T ss_conf 89999999--987660556177898730--111135444588884379-897057869999778998887259999938-
Q ss_pred HHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC-----CCCCCHHHHHHHHHHHHCCCCCCCCC-CCCCC
Q ss_conf 8762033456401068877998554668999980699995897-----78748478999997240674557755-67886
Q 000366 281 ALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPK-----LKSLDVKPLGCKLKDIYFPYIQCDEI-SSTGK 354 (1612)
Q Consensus 281 ~Le~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL~-----~~~~~i~~Lkr~La~IYhpyL~~d~~-~~~gk 354 (1612)
...|.+. +....++|| +|++.-.. ++.+.+..+.+.++....++|..... ...|+
T Consensus 159 --------~~~~~i~---------~~~~~~~GT--~I~L~Lk~d~~Efl~~~~i~~ivkkys~fi~~PI~~~~~e~~~~~ 219 (624)
T 2ioq_A 159 --------EGEYTVA---------DITKEDRGT--EITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGE 219 (624)
T ss_dssp --------SSCCEEE---------EECCSSSEE--EEEEEECTTCGGGGCHHHHHHHHHHHHTTCSSCEEEEEEEECSSC
T ss_pred --------CCEEEEE---------ECCCCCCCE--EEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf --------9747898---------888889984--999997562321150899999999972357875388502455665
Q ss_pred CCCCEEE-EEC---------CCCCCCCCCCEEEEECCCCCCCCCCEEE
Q ss_conf 4467289-763---------8224101498057721345899983367
Q 000366 355 TTRPIEF-QVN---------GIDLAEVAGGEVAITNMHSCNGPDFILQ 392 (1612)
Q Consensus 355 p~dpiei-~VN---------g~~L~dIe~~E~~~~~~hs~~gp~f~l~ 392 (1612)
. ..+. .+| ..++++.++.+||+...+.|.+|.++++
T Consensus 220 ~--~~~~~~in~~~~lw~~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih 265 (624)
T 2ioq_A 220 T--VISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSH 265 (624)
T ss_dssp E--EEEEEECCCCSCTTTSCTTTCCHHHHHHHHHHHHTCCSCCSCCEE
T ss_pred C--CCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCHHCCEEEEE
T ss_conf 4--332289767811047468623099999998764111105848998
No 2
>3nwc_A SMC protein; structural maintenance of chromosomes (SMC), SMC hinge domai dimerization, DNA binding, cell cycle; 1.70A {Pyrococcus furiosus}
Probab=1.00 E-value=1 Score=173.27 Aligned_cols=149 Identities=19% Similarity=0.250 Sum_probs=124.7
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 88870240021212267448899999833255237998028889999986411885200101355520275447704898
Q 000366 1349 FMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVI 1428 (1612)
Q Consensus 1349 ~~~gV~GvVa~L~~V~d~~ls~aLs~~lg~~~m~~VV~~t~~~ak~le~Yl~~~~i~~~~~~~~~~~s~~~~~~GR~tfL 1428 (1612)
..+||+|.|++|+.|++.+|..|++++||+ .|++||++|.+.|+.+.+|+++.+ .||+|||
T Consensus 32 ~~~gv~G~l~dLi~V~~~kye~Ave~aLG~-~l~~iVVd~~~~A~~~i~~Lk~~~------------------~GRatfl 92 (189)
T 3nwc_A 32 GIGGIYGTLAELIKVKDEAYALAIEVALGN-RADNVVVEDELVAEKAIKYLKEHK------------------LGRLTFL 92 (189)
T ss_dssp CCCSEEEEHHHHCEESCGGGHHHHHHHHGG-GGGCEEESSHHHHHHHHHHHHHTT------------------CCCCCEE
T ss_pred CCCCCEEEHHHHEEECHHHHHHHHHHHHCC-CCCCEEECCHHHHHHHHHHHHHCC------------------CCCEEEE
T ss_conf 789855778893156835689999998360-446078788899999999998648------------------8714999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCH
Q ss_conf 52797888999999992111369999999999898850776321113643321112358871034899760252300118
Q 000366 1429 CLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTR 1508 (1612)
Q Consensus 1429 pLd~Irp~~~~~~~~dpq~~L~l~~p~l~~g~~p~GfigyAvNLI~~d~~~~~~~t~~g~gLRetlf~~lFg~t~Vy~Tr 1508 (1612)
|||.|++. .++. ++|++ |+++|+||+++. .+|.++||++.|++
T Consensus 93 pl~~i~~~------------------~~~~---~~g~~--a~dlv~~d~~~~------------~a~~~llg~tlvv~-- 135 (189)
T 3nwc_A 93 PLNKIKPK------------------HVDS---SVGLP--AVDVIEYDQKIE------------NAVKFALGDTVIVN-- 135 (189)
T ss_dssp ETTTCCCC------------------CCCS---CSSEE--GGGGEECCGGGH------------HHHHHHHTTEEEES--
T ss_pred ECCCCCCC------------------CCCC---CCCCE--EEEEECCCHHHH------------HHHHHHHCCEEEEC--
T ss_conf 89866666------------------6889---99937--765543677788------------99998819989999--
Q ss_pred HHHHHHHHHCCCC-EEEECCCEEECCCEEEECCCC-CCEEECCCCCCC
Q ss_conf 8699997402584-699208802026508714699-830102432245
Q 000366 1509 KDMIEAHTCIRHG-AVSLDGGILKEDGIISLGCGN-PTICFPIVRTRI 1554 (1612)
Q Consensus 1509 ~~m~~A~~~i~~~-~VTLDG~lie~sG~~tgG~~~-~~~~F~~~~~~~ 1554 (1612)
+++.|+...++. +|||||++++++|.|+||+.. ++++|+...+..
T Consensus 136 -dl~~A~~l~~~~r~VTldGd~i~~~G~~tGG~~~~~~~~f~~~~~~~ 182 (189)
T 3nwc_A 136 -SMEEARPHIGKVRMVTIEGELYERSGAITGGHFRARGLAVDTTKLRL 182 (189)
T ss_dssp -CSGGGGGGTTTSEEEETTSCEECTTSCEECSCSSCCCSEECSSCCCC
T ss_pred -CHHHHHHHHCCCEEEECCCCEEECCEEEEECCCCCCCCEECHHHEEE
T ss_conf -99999998679739968981997888998089899875111222031
No 3
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=168.45 Aligned_cols=230 Identities=17% Similarity=0.179 Sum_probs=149.4
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHHCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 2102588977-8850789-89-9899999994110210002-------------89960799999716985999979999
Q 000366 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1612)
Q Consensus 140 n~~dL~Pd~~-lL~~lg~-~Y-sl~sAIAELVDNSIDA~~~-------------Na~A~~I~I~I~~d~~~I~V~DNG~G 203 (1612)
..+.+..++. +|..++. -| +...+|+|||.||+||... .+...+|.|.++-++..|+|.|||+|
T Consensus 4 e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGiG 83 (677)
T 2cg9_A 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIG 83 (677)
T ss_dssp EEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 43433133999999988737798158798885389999998888752691320678772899999389788999978989
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHHHH
Q ss_conf 99676966430133354200000-01146899999899765334621345640347799999507981499999732687
Q 000366 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEAL 282 (1612)
Q Consensus 204 Ms~eEL~~~~~wGtiG~S~~R~~-~a~~~Ggk~p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~gs~~v~~l~Ld~e~L 282 (1612)
|+.+++.+ +||+++.|..+.. .+...+ .....||+||+|++ ++|+++++++|.||+.+.. .+.|..+.
T Consensus 84 Mt~edl~~--~l~tIA~Sgt~~f~~kl~~~----~d~~~IGqFGvGFy-Saf~vadkV~V~Sk~~~~~-~~~W~s~g--- 152 (677)
T 2cg9_A 84 MTKAELIN--NLGTIAKSGTKAFMEALSAG----ADVSMIGQFGVGFY-SLFLVADRVQVISKSNDDE-QYIWESNA--- 152 (677)
T ss_dssp CCHHHHHG--GGSSSSSCTTHHHHSCCCSS----CCCCCCCCTTCTTG-GGGGTEEEEEEEEECTTSC-EEEEEECS---
T ss_pred CCHHHHHH--HHHHHHCCCCHHHHHHHHCC----CCHHHCCCCCCHHH-HHHHCCCEEEEEECCCCCC-EEEEEECC---
T ss_conf 89999999--98767035627788863122----43444178771268-7751576789997269985-69999859---
Q ss_pred HHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECC-----CCCCCCHHHHHHHHHHHHCCCCCCCCCCC------
Q ss_conf 6203345640106887799855466899998069999589-----77874847899999724067455775567------
Q 000366 283 MRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEP-----KLKSLDVKPLGCKLKDIYFPYIQCDEISS------ 351 (1612)
Q Consensus 283 e~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL-----~~~~~~i~~Lkr~La~IYhpyL~~d~~~~------ 351 (1612)
...|.+..... . ...++|| +|++.-. .++.+.+..+.+.++....++|.......
T Consensus 153 ------~~~~ti~~~~~----~--~~~~~GT--~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~ 218 (677)
T 2cg9_A 153 ------GGSFTVTLDEV----N--ERIGRGT--ILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVP 218 (677)
T ss_dssp ------SSEEEEEECCS----S--CCCSSEE--EEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC--
T ss_pred ------CCEEEEEECCC----C--CCCCCCE--EEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf ------96479865677----7--8889970--89999755000236699999999999860898869864031156768
Q ss_pred -C---------------------------C----C--CCC-----CEEE-EEC---------CCCCCCCCCCEEEEECCC
Q ss_conf -8---------------------------8----6--446-----7289-763---------822410149805772134
Q 000366 352 -T---------------------------G----K--TTR-----PIEF-QVN---------GIDLAEVAGGEVAITNMH 382 (1612)
Q Consensus 352 -~---------------------------g----k--p~d-----piei-~VN---------g~~L~dIe~~E~~~~~~h 382 (1612)
. + + +.+ ..+. ++| ..++++.+|.+||+...|
T Consensus 219 ~~e~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~ 298 (677)
T 2cg9_A 219 IPEEEKKDEEKKDEEKKDEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISN 298 (677)
T ss_dssp -------------------------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 63122101122112333222223432344410110124333332343210025687873368231789999999997638
Q ss_pred CCCCCCCEEEEE
Q ss_conf 589998336762
Q 000366 383 SCNGPDFILQLH 394 (1612)
Q Consensus 383 s~~gp~f~l~l~ 394 (1612)
.|++|.++++.+
T Consensus 299 d~~~pl~~~H~~ 310 (677)
T 2cg9_A 299 DWEDPLYVKHFS 310 (677)
T ss_dssp CCSCCSEEEEEE
T ss_pred CCCCCHHEEEEC
T ss_conf 977852157750
No 4
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=1.00 E-value=1 Score=165.72 Aligned_cols=297 Identities=16% Similarity=0.211 Sum_probs=175.5
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHHCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 2102588977-8850789-89-9899999994110210002-------------89960799999716985999979999
Q 000366 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1612)
Q Consensus 140 n~~dL~Pd~~-lL~~lg~-~Y-sl~sAIAELVDNSIDA~~~-------------Na~A~~I~I~I~~d~~~I~V~DNG~G 203 (1612)
..+.+..+++ +|..++. -| +...+|+|||+||+||... ++...+|.|.++-++..|+|.|||+|
T Consensus 5 e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~~~~~I~I~DnGiG 84 (559)
T 1y4s_A 5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVG 84 (559)
T ss_dssp EEEECCTTHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGCSCCCCCEEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 53210303999999998743798489999999879987576777642681112678764799999689858999989988
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCC--CEEEEEEEEHH
Q ss_conf 99676966430133354200000-0114689999989976533462134564034779999950798--14999997326
Q 000366 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVS--KEVYTLHLEKE 280 (1612)
Q Consensus 204 Ms~eEL~~~~~wGtiG~S~~R~~-~a~~~Ggk~p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~gs--~~v~~l~Ld~e 280 (1612)
|+.+++.. +|++++.|..+.. .+.. +........||+||+|++ ++|+++++++|.||+.+. ...+.|..+.
T Consensus 85 Mt~edl~~--~l~tiA~Sg~~~f~e~l~--~~~~~~~~~iG~fGvGfy-S~f~VadkV~V~Sr~~~~~~~~~~~w~s~g- 158 (559)
T 1y4s_A 85 MTRDEVID--HLGTIAKSGTKSFLESLG--SDQAKDSQLIGQFGVGFY-SAFIVADKVTVRTRAAGEKPENGVFWESAG- 158 (559)
T ss_dssp CCHHHHHH--HHSCCSCCCCCCTTCC----------CCCCSSCCCSGG-GHHHHEEEEEEEEECSSSCGGGEEEEEECS-
T ss_pred CCHHHHHH--HHHHHCCCCCHHHHHHHH--CCCCCCCCCCCCCCCCHH-HHHHCCCEEEEEECCCCCCCCEEEEEEEEC-
T ss_conf 89999999--976551556277898741--111135443488876356-564145768999757998887248999937-
Q ss_pred HHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC-----CCCCCHHHHHHHHHHHHCCCCCCCCC-CCCCC
Q ss_conf 8762033456401068877998554668999980699995897-----78748478999997240674557755-67886
Q 000366 281 ALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPK-----LKSLDVKPLGCKLKDIYFPYIQCDEI-SSTGK 354 (1612)
Q Consensus 281 ~Le~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL~-----~~~~~i~~Lkr~La~IYhpyL~~d~~-~~~gk 354 (1612)
...|.+. +....++|| +|++.-.. ++.+.+..+.+.++....++|..... ...|+
T Consensus 159 --------~~~~~i~---------~~~~~~~GT--~I~L~Lk~d~~Efle~~~I~~iv~kys~fi~~PI~~~~~e~~~~~ 219 (559)
T 1y4s_A 159 --------EGEYTVA---------DITKEDRGT--EITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGE 219 (559)
T ss_dssp --------SSEEEEE---------EECCCSCEE--EEEEEECTTCGGGSCHHHHHHHHHHHHTTCSSCEEEEEEECSTTS
T ss_pred --------CCEEEEE---------ECCCCCCCE--EEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf --------9735886---------777789983--999997655542350999999999973457875389611455665
Q ss_pred CCCCEEE-EEC---------CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 4467289-763---------822410149805772134589998336762100012234579998403778999999640
Q 000366 355 TTRPIEF-QVN---------GIDLAEVAGGEVAITNMHSCNGPDFILQLHFSLRQASATTNSPGSVCSFFLLLWLAMAYH 424 (1612)
Q Consensus 355 p~dpiei-~VN---------g~~L~dIe~~E~~~~~~hs~~gp~f~l~l~~~l~~~kr~~r~Pg~~~s~~~~~~~~~~~~ 424 (1612)
. ..+. .+| +.++++.++.+||+...+.|.+|.++++.+
T Consensus 220 ~--~~~~~~in~~~~lw~~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih~~------------------------------ 267 (559)
T 1y4s_A 220 T--VISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNR------------------------------ 267 (559)
T ss_dssp C--EEEEEECCCCCCGGGSCGGGCCHHHHHHHHHHHHTCSSCEEEEEEEC------------------------------
T ss_pred C--CCCEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEC------------------------------
T ss_conf 4--33228975783222258640309999999876413242483899832------------------------------
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 23440366515898887778778755308899998112456754125444331037521225688640134205712555
Q 000366 425 LSSKCRLRIIPFPKNWNLSGSRPSKEANARLKFVYFPVTEEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPD 504 (1612)
Q Consensus 425 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~v~~~~~YfPf~~~kEt~p~~~~~l~~~~~~~~e~~~~~~r~~~r~~GRLip~ 504 (1612)
.+|. -..++ +.|+|-.. |.+ +. .........+|=+||+|-+
T Consensus 268 ---------------------~eg~-~~~~g-ll~~P~~~-----p~~---~~--------~r~~~~~i~lyvn~v~I~d 308 (559)
T 1y4s_A 268 ---------------------VEGK-QEYTS-LLYIPSQA-----PWD---MW--------NRDHKHGLKLYVQRVFIMD 308 (559)
T ss_dssp ---------------------CCSS-SCEEE-EEEEESSC-----CTT---CS--------SSSCCCCEEEEETTEEEEE
T ss_pred ---------------------CCCC-EEEEE-EEECCCCC-----CCH---HH--------HHCCCCCEEEEECCEEEEC
T ss_conf ---------------------5785-69999-99907867-----610---22--------0213687699995879336
Q ss_pred CCCCCCCCCCHHHHCCCHHHHHHHHHCCEEEEEECCC-CCCCCCC
Q ss_conf 4433234641222035013347887501108872699-9898888
Q 000366 505 VHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDA-GFNPTPS 548 (1612)
Q Consensus 505 ~~~~~l~f~~~~~krg~k~~i~~~c~~Rv~g~lf~~~-~F~vt~n 548 (1612)
-. ++.+| +|.+=|+|.++.++ -.+||+.
T Consensus 309 ~~---------------~~llP-~~l~fv~gvVDs~dlplNVSRE 337 (559)
T 1y4s_A 309 DA---------------EQFMP-NYLRFVRGLIDSSDLPLNVSRE 337 (559)
T ss_dssp EE---------------GGGSC-GGGTTCEEEEEESSSCTTCCTT
T ss_pred CH---------------HHHCH-HHHHHEEEEECHHHCCCEECCH
T ss_conf 12---------------30474-7572546740762279721753
No 5
>3l51_B Structural maintenance of chromosomes protein 4; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus} SCOP: d.215.1.0
Probab=1.00 E-value=1 Score=164.23 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=112.5
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 88870240021212267448899999833255237998028889999986411885200101355520275447704898
Q 000366 1349 FMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVI 1428 (1612)
Q Consensus 1349 ~~~gV~GvVa~L~~V~d~~ls~aLs~~lg~~~m~~VV~~t~~~ak~le~Yl~~~~i~~~~~~~~~~~s~~~~~~GR~tfL 1428 (1612)
..+||+|.|++|+.|+ ++|..|+++++| .|++||++|.+.|+.+.+|+++.+ .||+|||
T Consensus 15 ~~~Gv~G~v~dLi~v~-~~y~~Aie~alg--~l~~iVVd~~~~A~~~i~~Lk~~~------------------~GRatfl 73 (166)
T 3l51_B 15 RIPGIYGRLGDLGAID-EKYDIAISSCCH--ALDYIVVDSIDTAQECVNFLKKHN------------------IGIATFI 73 (166)
T ss_dssp SSTTEEEEGGGSCBCC-GGGHHHHHHHCG--GGGSEEESCHHHHHHHHHHHHHTT------------------CCCCCEE
T ss_pred CCCCCEEEHHHHEEEC-HHHHHHHHHHHH--HCCEEEECCHHHHHHHHHHHHHCC------------------CCEEEEE
T ss_conf 9997168877803007-879999999971--284299887999999999998729------------------9707999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC-CCCCCCCCCCCCCCHHHHHHHHHCCCEEECC
Q ss_conf 527978889999999921113699999999998988507763211136-4332111235887103489976025230011
Q 000366 1429 CLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLD-DHHMHIRTSAGNGLRETLLYRLFGKLQVYKT 1507 (1612)
Q Consensus 1429 pLd~Irp~~~~~~~~dpq~~L~l~~p~l~~g~~p~GfigyAvNLI~~d-~~~~~~~t~~g~gLRetlf~~lFg~t~Vy~T 1507 (1612)
|||+|++.... .+.. . .|+...+|+++|+|+ +++. .+|+++||+++|++
T Consensus 74 pL~~i~~~~~~-------------~~~~---~-~~~~~~~a~dlv~~~d~~~~------------~a~~~llg~tlVv~- 123 (166)
T 3l51_B 74 GLDKMTVWAKK-------------MSKI---Q-TPENTPRLFDLVKVKNEEIR------------QAFYFALRDTLVAN- 123 (166)
T ss_dssp EGGGTGGGTTS-------------CCCC---C-CGGGCCBHHHHCBCSCHHHH------------HHHHHHHTTCEEES-
T ss_pred ECCCCCCCCCC-------------CCCC---C-CCCCHHHHHHEEECCCHHHH------------HHHHHHCCCEEEEC-
T ss_conf 88655545566-------------3302---2-66546568520407868899------------99999829989989-
Q ss_pred HHHHHHHHHHC-----CCCEEEECCCEEECCCEEEECCC
Q ss_conf 88699997402-----58469920880202650871469
Q 000366 1508 RKDMIEAHTCI-----RHGAVSLDGGILKEDGIISLGCG 1541 (1612)
Q Consensus 1508 r~~m~~A~~~i-----~~~~VTLDG~lie~sG~~tgG~~ 1541 (1612)
+++.|+... +-.+|||||++++++|.||||+.
T Consensus 124 --dl~~A~~~~~~~~~~~r~VTldGdli~~~G~~tGG~~ 160 (166)
T 3l51_B 124 --NLDQATRVAYQRDRRWRVVTLQGQIIEQSGTMSGGLE 160 (166)
T ss_dssp --SHHHHHHHHBCSSCBCCEEETTSCEECTTCCEEECCG
T ss_pred --CHHHHHHHHHHHCCCCEEEECCCEEEECCEEEECCCC
T ss_conf --9999999888608994899789889958988978885
No 6
>3l51_A Structural maintenance of chromosomes protein 2; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus}
Probab=1.00 E-value=1 Score=161.57 Aligned_cols=149 Identities=21% Similarity=0.227 Sum_probs=115.8
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 99988888702400212122674488999998332552379980288899999864118852001013555202754477
Q 000366 1344 KPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDG 1423 (1612)
Q Consensus 1344 ~~~s~~~~gV~GvVa~L~~V~d~~ls~aLs~~lg~~~m~~VV~~t~~~ak~le~Yl~~~~i~~~~~~~~~~~s~~~~~~G 1423 (1612)
+..+...+||+|.|++|+.|++++|..|++++||+ .|+.||++|.+.|+.+.+|+ ...|
T Consensus 8 ~~~~~~~~gv~G~v~dLi~v~d~~y~~Ave~alG~-~l~~iVVd~~~~A~~~i~~~--------------------~~~G 66 (161)
T 3l51_A 8 PEKNWNRNSVKGLVASLINVKDNSTATALEVVAGE-RLYNVVVDTEVTAKKLLEKG--------------------ELKR 66 (161)
T ss_dssp SSTTCCGGGEEEEGGGSCEESCGGGHHHHHHHHGG-GGGCEEESCHHHHHHHHHHS--------------------CCSS
T ss_pred CCCCCCCCCCEEEHHHHEEECCHHHHHHHHHHHCC-CCCEEEECCHHHHHHHHHHH--------------------HHCC
T ss_conf 99998857547887791251842199999998341-12349989789999999987--------------------5278
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCE
Q ss_conf 04898527978889999999921113699999999998988507763211136433211123588710348997602523
Q 000366 1424 RYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQ 1503 (1612)
Q Consensus 1424 R~tfLpLd~Irp~~~~~~~~dpq~~L~l~~p~l~~g~~p~GfigyAvNLI~~d~~~~~~~t~~g~gLRetlf~~lFg~t~ 1503 (1612)
|+||||||+|++.... .+.+.. +.+...++.+++|+++|+||++++ .+|+++||+++
T Consensus 67 R~tflpL~~i~~~~~~------~~~~~~-----~~~~~~~~~~~~a~dlv~~d~~~~------------~a~~~llg~tl 123 (161)
T 3l51_A 67 RYTIIPLNKISARCIA------PETLRV-----AQNLVGPDNVHVALSLVDYKPELQ------------KGMEFVFGTTF 123 (161)
T ss_dssp CEEEEETTTCCCCCCC------HHHHHH-----HHHHHCTTSEEEGGGGEECCGGGH------------HHHHHHHTTCE
T ss_pred CEEEEECCCCCCCCCC------HHHHHH-----HHHCCCCCCHHHHHHHHCCCHHHH------------HHHHHHCCCEE
T ss_conf 5799987644556768------777755-----440478861567888850788899------------99999839989
Q ss_pred EECCHHHHHHHHHHCC-----CCEEEECCCEEECCCEEEEC
Q ss_conf 0011886999974025-----84699208802026508714
Q 000366 1504 VYKTRKDMIEAHTCIR-----HGAVSLDGGILKEDGIISLG 1539 (1612)
Q Consensus 1504 Vy~Tr~~m~~A~~~i~-----~~~VTLDG~lie~sG~~tgG 1539 (1612)
|++ +++.|+.... -.+|||||++++++|.|+||
T Consensus 124 v~~---dl~~A~~~~~~~~~~~r~VTldGd~i~~~G~~tGG 161 (161)
T 3l51_A 124 VCN---NMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGG 161 (161)
T ss_dssp EES---SHHHHHHHHHCTTTCCCEEETTSCEECCC------
T ss_pred EEC---CHHHHHHHHHHCCCCCEEEECCCEEECCCEEEECC
T ss_conf 999---99999999974599874996998598587887359
No 7
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=1.00 E-value=1 Score=158.70 Aligned_cols=230 Identities=14% Similarity=0.138 Sum_probs=141.1
Q ss_pred CCCCCCCCHHHH-HHCCC-CC-CHHHHHHHHHHCCHHHCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 210258897788-50789-89-9899999994110210002-------------89960799999716985999979999
Q 000366 140 NMWDLTPDTDLL-RELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1612)
Q Consensus 140 n~~dL~Pd~~lL-~~lg~-~Y-sl~sAIAELVDNSIDA~~~-------------Na~A~~I~I~I~~d~~~I~V~DNG~G 203 (1612)
..+.+..++..| ..++. -| +...+|+|||.||+||... ++...+|.|.++-++..|+|.|||+|
T Consensus 23 e~~~Fqaei~~Ll~li~~sLYsn~eifLRELIsNA~DA~dk~r~~~l~~~~~~~~a~~~~I~I~~d~~~~~I~I~DnGiG 102 (666)
T 2o1u_A 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVG 102 (666)
T ss_dssp -----------CCSSSTTTTSSSCTTHHHHHHHHHHHHHHHHHHHTTSCTTSSSSCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred CCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 21425776999999988732698239899987569999998888742680211678763799999389778999988989
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHHH
Q ss_conf 99676966430133354200000-011468999-9989976533462134564034779999950798149999973268
Q 000366 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGGKP-PYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEA 281 (1612)
Q Consensus 204 Ms~eEL~~~~~wGtiG~S~~R~~-~a~~~Ggk~-p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~gs~~v~~l~Ld~e~ 281 (1612)
|+.+++.. +|++++.|..+.. .+...+... ......||+||+|++ |+|+++++++|.||+.++. .+.|..+.
T Consensus 103 Mt~edl~~--~l~tIA~SGtk~f~~kl~~~~~~~~~d~~~IGqFGvGfy-Saf~vAdkV~V~Sr~~~~~-~~~W~s~g-- 176 (666)
T 2o1u_A 103 MTREELVK--NLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFY-SAFLVADKVIVTSKHNNDT-QHIWESDS-- 176 (666)
T ss_dssp CCHHHHHH--HTTC-------------------------------CTTG-GGGGTEEEEEEEEECTTSC-CEEEEESS--
T ss_pred CCHHHHHH--HHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHH-HHHHHCCEEEEEEEECCCC-EEEEEEEC--
T ss_conf 89999999--976552536288899864002355320554267880788-5987558889999618974-69999958--
Q ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECC-----CCCCCCHHHHHHHHHHHHCCCCCCCCCCC-CCCC
Q ss_conf 76203345640106887799855466899998069999589-----77874847899999724067455775567-8864
Q 000366 282 LMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEP-----KLKSLDVKPLGCKLKDIYFPYIQCDEISS-TGKT 355 (1612)
Q Consensus 282 Le~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL-----~~~~~~i~~Lkr~La~IYhpyL~~d~~~~-~gkp 355 (1612)
..+.+....+ . ...++|| +|++.-. ..+.+.+..+.+.++....++|....... .++
T Consensus 177 --------g~~ti~~~~~----~--~~~~~GT--~I~L~Lk~d~~Efle~~~I~~ivkkys~fi~~PI~~~~~~~~~~~- 239 (666)
T 2o1u_A 177 --------NEFSVIADPR----G--NTLGRGT--TITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGG- 239 (666)
T ss_dssp --------SCCEEEECTT----C--CSSSSEE--EEEEEECTTTTTSSSTTHHHHHHHHHSTTCCSCEEEEECC------
T ss_pred --------CEEEEEECCC----C--CCCCCCE--EEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC-
T ss_conf --------8679875566----7--7899973--899997661254431889999999987437986697034444554-
Q ss_pred CCCEEE-EEC---------CCCCCCCCCCEEEEECCCCCCCCCCEEE
Q ss_conf 467289-763---------8224101498057721345899983367
Q 000366 356 TRPIEF-QVN---------GIDLAEVAGGEVAITNMHSCNGPDFILQ 392 (1612)
Q Consensus 356 ~dpiei-~VN---------g~~L~dIe~~E~~~~~~hs~~gp~f~l~ 392 (1612)
....++ .+| ..++++.++.+||+...+.|.+|.++++
T Consensus 240 ~~~~~~~~iN~~~~lw~~~~~~i~~eey~~fy~~~~~d~~~pl~~ih 286 (666)
T 2o1u_A 240 KTVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIH 286 (666)
T ss_dssp --CCEEEECSCCSCTTTSCTTTCCHHHHHHHHHHTTCTTSCCSEEEE
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 23443289866843003586303399999998664112005705897
No 8
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*
Probab=1.00 E-value=1 Score=144.62 Aligned_cols=185 Identities=16% Similarity=0.174 Sum_probs=111.9
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHHCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 2102588977-8850789-89-9899999994110210002-------------89960799999716985999979999
Q 000366 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1612)
Q Consensus 140 n~~dL~Pd~~-lL~~lg~-~Y-sl~sAIAELVDNSIDA~~~-------------Na~A~~I~I~I~~d~~~I~V~DNG~G 203 (1612)
..+.+..+.. ++..+.. .| +...+|+|||+||+||... +....+|.|.++-+...|+|.|||+|
T Consensus 10 ~~~~F~~ei~~L~~ll~~~lys~~~~~lrELI~NA~DA~ak~~~~~~~~~~~~~~~~~~~I~i~~d~~~~~i~I~DnG~G 89 (236)
T 2gqp_A 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVG 89 (236)
T ss_dssp TEECCCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
T ss_conf 13133686999999999861399269999999849875240220024672103678835999999089878999988958
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCC-CCCCCCC-CCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHHH
Q ss_conf 99676966430133354200000-0114689-999989976533462134564034779999950798149999973268
Q 000366 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGG-KPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEA 281 (1612)
Q Consensus 204 Ms~eEL~~~~~wGtiG~S~~R~~-~a~~~Gg-k~p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~gs~~v~~l~Ld~e~ 281 (1612)
|++++|.. +|++++.|..+.. .....+. ..+.....+|+||+|++ |+|+++++++|.||+.+.. .+.|..+.
T Consensus 90 Mt~edl~~--~l~~ia~Sg~~~f~~kl~~~~~~~~~d~~~iG~fGiG~~-S~f~va~~v~V~Sr~~~~~-~~~w~~~g-- 163 (236)
T 2gqp_A 90 MTREELVK--NLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFY-SAFLVADKVIVTSKHNNDT-QHIWESDS-- 163 (236)
T ss_dssp CCHHHHHH--HHHCC---------------------CHHHHHHTTCGGG-GGGGTEEEEEEEEECTTSC-CEEEEESS--
T ss_pred CCHHHHHH--HHHHHCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHH-HHHHCCCEEEEEEECCCCC-EEEEEEEC--
T ss_conf 79999999--976552436376787753013445433223378885251-3853588799998079985-69999809--
Q ss_pred HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC-----CCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 762033456401068877998554668999980699995897-----78748478999997240674557
Q 000366 282 LMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPK-----LKSLDVKPLGCKLKDIYFPYIQC 346 (1612)
Q Consensus 282 Le~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL~-----~~~~~i~~Lkr~La~IYhpyL~~ 346 (1612)
..+.+....+ . ...++|| +|++.... ++.+.+.++.+.++...+++|..
T Consensus 164 --------g~~~i~~~~~----~--~~~~~GT--~I~l~Lk~~~~~~le~~~i~~lv~~~s~~i~~pI~~ 217 (236)
T 2gqp_A 164 --------NEFSVIADPR----G--NTLGRGT--TITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYV 217 (236)
T ss_dssp --------SCEEEEECTT----C--SCSSSEE--EEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEEE
T ss_pred --------CEEEEEECCC----C--CCCCCCE--EEEEEECCCCHHHCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf --------9789986667----7--8899880--999998883044271999999999986108975488
No 9
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=1.00 E-value=1 Score=144.58 Aligned_cols=182 Identities=22% Similarity=0.219 Sum_probs=114.8
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHHCCC-------C------CCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 2102588977-8850789-89-9899999994110210002-------8------9960799999716985999979999
Q 000366 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------N------AKNERRLISVNIAEDKISVFDTGPG 203 (1612)
Q Consensus 140 n~~dL~Pd~~-lL~~lg~-~Y-sl~sAIAELVDNSIDA~~~-------N------a~A~~I~I~I~~d~~~I~V~DNG~G 203 (1612)
..+.+..+.. +|..+.. -| +...+|+|||.||.||..+ + ....+|.|.++.+...|+|.|||+|
T Consensus 17 e~~~Fqae~~~ll~ll~~~lYs~~~ifLRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~~~~~L~I~DnGiG 96 (239)
T 3nmq_A 17 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIG 96 (239)
T ss_dssp EEEECCHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred EEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEECCCCEEEEEECCCC
T ss_conf 14762166999999998864698099999998686879998888750680111689856999998189657999969989
Q ss_pred CCHHHHHHHHHCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHHHH
Q ss_conf 9967696643013335420000-001146899999899765334621345640347799999507981499999732687
Q 000366 204 MDSTDENSIVKWGKMGASLHRA-SKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEAL 282 (1612)
Q Consensus 204 Ms~eEL~~~~~wGtiG~S~~R~-~~a~~~Ggk~p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~gs~~v~~l~Ld~e~L 282 (1612)
|+++++.+ +|++++.|..+. ..+...+ ..+..||+||+|+++ +|+++++++|.||+.+.. .+.|.-+
T Consensus 97 Mt~edL~~--~LgtIA~Sgtk~f~e~~~~~----~d~~~IGqFGvGfyS-af~vadkv~V~Sk~~~~~-~~~W~s~---- 164 (239)
T 3nmq_A 97 MTKADLIN--NLGTIAKSGTKAFMEALQAG----ADISMIGQFGVGFYS-AYLVAEKVVVITKHNDDE-QYAWESS---- 164 (239)
T ss_dssp CCHHHHHT--HHHHHHHHHHHHHHHHHHTT----CCGGGGGGGTCGGGG-GGGTEEEEEEEEECTTSC-CEEEEEC----
T ss_pred CCHHHHHH--HHHHHHCCCCHHHHHHHCCC----CCCCCCCCCCCCCCC-CCCCCCEEEEEEEECCCC-EEEEEEC----
T ss_conf 79999999--99888225324245552036----774434666754020-126588789999407884-2689977----
Q ss_pred HHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC-----CCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 62033456401068877998554668999980699995897-----787484789999972406745577
Q 000366 283 MRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPK-----LKSLDVKPLGCKLKDIYFPYIQCD 347 (1612)
Q Consensus 283 e~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL~-----~~~~~i~~Lkr~La~IYhpyL~~d 347 (1612)
....|.+.... .+ ..++|| +|++.... ++.+.+..|.+.++....++|...
T Consensus 165 -----~~g~fti~~~~-----~~--~~~~GT--~I~L~lk~d~~e~l~~~~i~~lv~kys~fi~~pI~~~ 220 (239)
T 3nmq_A 165 -----AGGSFTVRADH-----GE--PIGRGT--KVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLY 220 (239)
T ss_dssp -----STTEEEEEECC-----SS--CCSSEE--EEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEEEC
T ss_pred -----CCCCEEEEECC-----CC--CCCCCC--EEEEEECCCHHHHCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf -----99767999668-----88--678998--8999988885786387899999999875269863886
No 10
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=1.00 E-value=1 Score=143.07 Aligned_cols=183 Identities=20% Similarity=0.203 Sum_probs=112.2
Q ss_pred CCCCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHHCCC--------C---CCCEEEEEEEEE--CCCEEEEEECC
Q ss_conf 222102588977-8850789-89-9899999994110210002--------8---996079999971--69859999799
Q 000366 138 FENMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT--------N---AKNERRLISVNI--AEDKISVFDTG 201 (1612)
Q Consensus 138 ~~n~~dL~Pd~~-lL~~lg~-~Y-sl~sAIAELVDNSIDA~~~--------N---a~A~~I~I~I~~--d~~~I~V~DNG 201 (1612)
..+.+.+.++.. ++..++. .| ++..+|+|||+||+||... + +....+.|.|.. +...|+|.|||
T Consensus 44 ~~e~~~F~~ei~~Ll~ll~~~lys~~~~~lrELI~NA~DA~ak~r~~~l~~~~~~~~~~~i~I~i~~d~~~~~I~I~DnG 123 (264)
T 1yc1_A 44 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG 123 (264)
T ss_dssp CEEEEECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGGGCCCCCEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEECC
T ss_conf 32468735889999999988602888899999987899886635544225731137897389999987984699999888
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHH
Q ss_conf 9999676966430133354200000-011468999998997653346213456403477999995079814999997326
Q 000366 202 PGMDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKE 280 (1612)
Q Consensus 202 ~GMs~eEL~~~~~wGtiG~S~~R~~-~a~~~Ggk~p~~~~~IGrFGVGlK~ASfsLG~rVtV~TK~~gs~~v~~l~Ld~e 280 (1612)
+||+.++|.. +|++++.|..+.. .....+ .....+|+||+|++ ++|+++++++|.||+.+.. .+.|..+.
T Consensus 124 ~GMs~edL~~--~l~~ia~S~~~~f~~~l~~~----~d~~~iG~fGiGf~-S~f~va~~v~V~Sr~~~~~-~~~w~~~~- 194 (264)
T 1yc1_A 124 IGMTKADLIN--NLGTIAKSGTKAFMEALQAG----ADISMIGQFGVGFY-SAYLVAEKVTVITKHNDDE-QYAWESSA- 194 (264)
T ss_dssp CCCCHHHHHH--HHHSCTTSCHHHHHHHHHTT----CCGGGGGGGTCGGG-GHHHHEEEEEEEEECTTSC-CEEEEECS-
T ss_pred CCCCHHHHHH--HHHHHCCCCCHHHHHHHCCC----CCHHHCCCCCCCCC-CCCCCCCEEEEEEECCCCC-EEEEEECC-
T ss_conf 6879999999--98766123435566663023----45223178777726-2024778789997069985-37999938-
Q ss_pred HHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECC--C---CCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 876203345640106887799855466899998069999589--7---78748478999997240674557
Q 000366 281 ALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEP--K---LKSLDVKPLGCKLKDIYFPYIQC 346 (1612)
Q Consensus 281 ~Le~~s~~~~ewkl~~~ir~ps~eEi~~~~hGTFT~VVI~eL--~---~~~~~i~~Lkr~La~IYhpyL~~ 346 (1612)
...|.+.... .+ ..++|| +|++.-. . ++.+.+..+.+.++....++|..
T Consensus 195 --------~~~~~i~~~~-----~~--~~~~GT--~I~l~Lk~~~~e~~e~~~i~~lv~k~s~fi~~PI~~ 248 (264)
T 1yc1_A 195 --------GGSFTVRTDT-----GE--PMGRGT--KVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITL 248 (264)
T ss_dssp --------TTEEEEEECC-----SS--CCSSEE--EEEEEECGGGGGGGSHHHHHHHHHHHTTTCSSCEEE
T ss_pred --------CCEEEEEECC-----CC--CCCCCE--EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf --------9658873047-----78--799792--999997782234535999999999999648987799
Done!