Query 000369
Match_columns 1610
No_of_seqs 380 out of 1385
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 18:44:24 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000369.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_145-149//hhsearch_pdb/000369hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2of3_A ZYG-9; multifunctional 1.0 1 1 489.4 28.6 257 1129-1389 2-265 (266)
2 4ffb_C Protein STU2; tubulin f 1.0 1 1 314.3 22.1 240 1-242 1-261 (278)
3 2qk1_A Protein STU2; STU2P, XM 1.0 1 1 307.6 29.1 231 270-502 2-248 (249)
4 1u6g_C TIP120 protein, CAND1; 1.0 1 1 280.0 69.5 989 15-1373 10-1048(1230)
5 1u6g_C TIP120 protein, CAND1; 1.0 1 1 266.8 88.9 939 16-1055 53-1145(1230)
6 2qk2_A LP04448P; mini spindles 1.0 1 1 265.8 24.0 231 271-504 2-235 (242)
7 4fdd_A Transportin-1; heat rep 1.0 1 1 247.5 70.8 581 290-1065 220-848 (852)
8 1b3u_A Protein (protein phosph 1.0 1 1 242.1 42.1 563 288-1039 13-585 (588)
9 2qk1_A Protein STU2; STU2P, XM 1.0 1 1 237.0 23.0 228 840-1070 3-249 (249)
10 4fdd_A Transportin-1; heat rep 1.0 1 1 232.3 63.1 177 294-473 99-284 (852)
No 1
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=489.39 Aligned_cols=257 Identities=28% Similarity=0.568 Sum_probs=247.6
Q ss_pred CCCCCCCCCCHHHHHH----HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 0012467998588864----210334455899246999999998541099998416511998999999999846887467
Q 000369 1129 QALLNVKDSNKEDRER----MVVRRFKFEDPRIEQIQELENDMMKYFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRKD 1204 (1610)
Q Consensus 1129 ~~~~~~~~~~k~~R~~----~~~~k~~~~~~~~e~~e~L~~q~~~~~~~~l~~~lfs~d~~~~~~~i~~L~~~~~~~~~~ 1204 (1610)
+|++++ +++|++|++ +++++|+|++||+|++++|++||.++++++++.+|||+||++|++|+++|++.+++++++
T Consensus 2 ~~~l~~-~~~K~~R~~~e~~~k~~~w~f~~p~~e~v~~L~~~~~~~~~~~~~~~lfs~d~k~~~~ale~L~~~l~~~~~~ 80 (266)
T 2of3_A 2 ELLLSD-NEDKKQRIKEEKQLKLVKWNFQAPTDEHISQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLADTSPRS 80 (266)
T ss_dssp CCSBCC-SSHHHHHHHHHHTTCSCCSCCSSCCHHHHHHHHHHHHTTBCHHHHHHHTCSCHHHHHHHHHHHHHHHHHCHHH
T ss_pred CCCEEC-CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_conf 983116-7517888887513466668889999899999999999845599999862877999999999999883017699
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 99988799979877406776899999996899999998635888778779843679998318983789999999999998
Q 000369 1205 IIEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDEGYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIV 1284 (1610)
Q Consensus 1205 ~~~~lDlilk~~~~r~~dtN~~v~~k~Le~l~~l~~~l~~~~y~l~~~ea~~~lp~li~K~Gd~k~~vr~~v~~il~~~~ 1284 (1610)
+++++|++|+|+++||||+|++|++++||+|..+|.+|.+.+|+|++||+.+|+|+|++|+||+||.||+.++.+++.++
T Consensus 81 ~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea~~~lP~LveKlGd~k~~vR~~~r~il~~l~ 160 (266)
T 2of3_A 81 LLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLS 160 (266)
T ss_dssp HHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999971887999999999999999999864556509899978999999828974889999999999999
Q ss_pred HCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4078212099997000588646599999999999986177764400049---9999530379667899999999999986
Q 000369 1285 NFYSATKTLPYILEGLRSKNNRTRIECVDLVGFLIDHHGAEISGQLKSL---QIVASLTAERDGEIRKAALNTLATGYKI 1361 (1610)
Q Consensus 1285 ~~~~~~kvf~~l~~gl~sKn~r~r~ecl~~l~~li~~~g~~~~~~~k~l---~~ia~~i~drd~~VR~aAl~~l~~~y~~ 1361 (1610)
.+||++++|+|+++|++|||||+|+||+++++++|++||+. +.|++ +.|+++++|+|++||+||+||++++|.+
T Consensus 161 ~v~~~~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~---~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~ 237 (266)
T 2of3_A 161 DVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS---PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKF 237 (266)
T ss_dssp HHHCHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG---GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC---CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87899999999999971698999999999999999862997---200024347999987399878999999999999998
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 0867999850499988987999997555
Q 000369 1362 LGEDIWRYVGKLTDAQKSMLDDRFKWKV 1389 (1610)
Q Consensus 1362 ~G~~v~~~ig~l~~~~~s~l~er~kr~~ 1389 (1610)
+||.||+++|+|++++++||+|||||++
T Consensus 238 ~Gd~v~k~lg~L~~~~~~~l~er~~r~~ 265 (266)
T 2of3_A 238 EGDQMWKAAGRMADKDKSLVEERIKRTG 265 (266)
T ss_dssp HTTHHHHHHCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHCC
T ss_conf 1199999884489999999999986445
No 2
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=314.29 Aligned_cols=240 Identities=24% Similarity=0.357 Sum_probs=201.2
Q ss_pred CCHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC--C---HHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 9737763653129982332057754688999999999840028998--6---2454122125764048869999999999
Q 000369 1 MSEEEKLLKEAKKLPWEDRLLHKNWKVRNEANIDLAALCDSITDPK--D---NRIRELGPLFKKTVADSNAPVQDKALDA 75 (1610)
Q Consensus 1 m~~~~~~~~~~~~lpl~~~l~~k~WK~R~~ayeel~~~~~~~~~~~--~---~~~~~~~~~~~k~v~DsN~~~q~~~lea 75 (1610)
|++|++ .||++|||+|||.||+||.|++||+++.+.|....... + ..|..+.+++++++.|+|+.|+++++++
T Consensus 1 m~~~e~--~d~sklpl~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~ 78 (278)
T 4ffb_C 1 MSGEEE--VDYTTLPLEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVA 78 (278)
T ss_dssp ------------CCCHHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHH
T ss_pred CCCCCH--HHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 997430--225409977752068189999999999999863865555306799999989999998545449999999999
Q ss_pred HHHHHHHHCHHHH------HHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHH
Q ss_conf 9999997042110------0358899999842038-9853699999999999943002-339999999740177121879
Q 000369 76 LIAYLKAADADAG------RYAKEVCDAIAAKCLT-GRPKTVEKAQAVFMLWVELEAV-DVFLDVMEKAIKNKVAKAVVP 147 (1610)
Q Consensus 76 l~~~v~~~~~~~~------~~~~~v~~~lveK~l~-~k~~~k~~a~~~ll~~~e~~~~-~~v~~~l~~~~~~KnpKv~~~ 147 (1610)
+..|+..++...+ .++..+++.|++||++ +|+++++.+.++++.+++...+ +.+++.+..++.|||||++.+
T Consensus 79 l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~~e~l~~~l~~Knpkv~~~ 158 (278)
T 4ffb_C 79 LNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQSVELVIPFFEKKLPKLIAA 158 (278)
T ss_dssp HHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHHHHHHGGGGGCSCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 99999985122101202588899998999999705763899999999999999861769999999999884268778999
Q ss_pred HHHHHHHHHHHHCCCCCCHHH----HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHCHHHHHHHHH
Q ss_conf 999999999972989769266----88732453179997799999999999998619702--237896128199999999
Q 000369 148 AIDVMFQALSEFGAKIIPPKR----ILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDP--VKTILFEKMRDTMKKELE 221 (1610)
Q Consensus 148 ~l~~l~~~l~~fG~~~i~~k~----il~~l~~ll~~~d~~VR~~a~~l~~ely~~~G~~~--~~~~l~~~Lkp~q~kel~ 221 (1610)
|+.||.+++.+||.+.+++++ +++.++++|+|+|++||++|+.+++++|+|+|+.. +...++++|||+|+++|+
T Consensus 159 ~l~~l~~~l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~~~~~~~~~~l~~lkp~~~k~le 238 (278)
T 4ffb_C 159 AANCVYELMAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVTGNNSDLLEEILFKKLKPIQVKDLH 238 (278)
T ss_dssp HHHHHHHHHHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC-----------CTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99999999998498768814479999999999981786999999999999999996843445556666118999999999
Q ss_pred HHHHHCCCCCCCC--CCCHHHHH
Q ss_conf 9997047998886--40035664
Q 000369 222 VELVNVSGTARPT--RKIRAEQD 242 (1610)
Q Consensus 222 ~~f~~~~~~~~p~--r~~rs~~~ 242 (1610)
++|+++.+.++|+ |+.+.++.
T Consensus 239 ~~f~k~~~~~~~~~~~~~~~~~~ 261 (278)
T 4ffb_C 239 KLFAKVGDEPSSSKMLFEWEKRE 261 (278)
T ss_dssp HHHSCCCC-------CCHHHHHH
T ss_pred HHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 99986679999998503665756
No 3
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=307.62 Aligned_cols=231 Identities=24% Similarity=0.436 Sum_probs=219.4
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH-HH-CCCCCC--CCCHHHHHHHHHHHC-CCCCHHHHHH
Q ss_conf 997668894443575851003343106994999999999999-74-489989--999589999998770-6769999999
Q 000369 270 IDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTK-LA-STKRIA--PGDFTEVCRTLKKLI-TDVNIAVAVE 344 (1610)
Q Consensus 270 ~d~~d~~~~vdIl~kl~~~~f~~~l~s~kW~~R~eaL~~L~~-l~-~~~ki~--~~~~~~l~~~L~~~i-~D~N~~v~~~ 344 (1610)
.|+||++|||||++++| ++|++.+.|+||++|++|++.|.. ++ +++++. .++|.+++..|++.+ +|+|..|+..
T Consensus 2 ~~~~d~~~~~~i~~kl~-~~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~ 80 (249)
T 2qk1_A 2 SHMASMLPEETILDKLP-KDFQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVAL 80 (249)
T ss_dssp CCSCCCCCCBCCGGGSC-TTHHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHH
T ss_pred CCHHHHCCHHHHHHHCC-HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 86576167146655177-20787851687999999999999999745986566742399999999998335898999999
Q ss_pred HHHHHHHHHHHHH-HCCH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC-----C-HHHHHHHHHHHHHCCC
Q ss_conf 9999999998720-1000-33665899999981217189999999999999983699-----9-5756999999752189
Q 000369 345 AIQAIGNLARGLR-THFS-GSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCL-----N-LVDVVEDVKTSVKNKV 416 (1610)
Q Consensus 345 A~~~i~~La~~L~-~~f~-~~~~~llp~LL~klkdkk~~V~~aa~~al~ai~~~~~~-----~-l~~il~~i~~~l~~Kn 416 (1610)
|++|++.|+++++ +.|+ +|...++|.++++++|+|+.|++++..|+++++.+ +. + ++.+++.+..+++|||
T Consensus 81 A~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~-~~~~~~~~~l~~ll~~l~~~l~~k~ 159 (249)
T 2qk1_A 81 AAQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKY-YDPLASSGRNEDMLKDILEHMKHKT 159 (249)
T ss_dssp HHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHH-SCTTCTTCTTHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 999999999762654541878999999999987379779999999999999997-3012357769999999999876998
Q ss_pred HHHHHHHHHHHHHHHHHCCH--HHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH
Q ss_conf 48999999999999970793--6987754-43799999760389968999999999999998088257885652029999
Q 000369 417 PLVRSLTLNWVTFCIETSSK--AAVLKVH-KDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRR 493 (1610)
Q Consensus 417 p~vR~~~l~~L~~~l~~~~~--~~l~~~l-~~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~~~~G~~~~~~~l~~Ld~~~~ 493 (1610)
|++|.+++.|+.+++..++. ..+.+++ +.++|.+.++++|++++||++|.++++++++++|++.+.+|++.||+.++
T Consensus 160 ~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~~~~p~l~~Ld~~k~ 239 (249)
T 2qk1_A 160 PQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMNTFVKTLEHLDNLKR 239 (249)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSGGGHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 39999999999999987678506688987999999999986699899999999999999998197878999998708899
Q ss_pred HHHHHHHHC
Q ss_conf 999999823
Q 000369 494 NKLSEMIAG 502 (1610)
Q Consensus 494 kki~e~~~~ 502 (1610)
+||++++++
T Consensus 240 ~ki~~~~~~ 248 (249)
T 2qk1_A 240 KKIEETVKT 248 (249)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
T ss_conf 999998745
No 4
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=1.00 E-value=1 Score=279.95 Aligned_cols=989 Identities=15% Similarity=0.136 Sum_probs=554.0
Q ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 82332057754688999999999840028998624-54122125764048869999999999999999704211003588
Q 000369 15 PWEDRLLHKNWKVRNEANIDLAALCDSITDPKDNR-IRELGPLFKKTVADSNAPVQDKALDALIAYLKAADADAGRYAKE 93 (1610)
Q Consensus 15 pl~~~l~~k~WK~R~~ayeel~~~~~~~~~~~~~~-~~~~~~~~~k~v~DsN~~~q~~~leal~~~v~~~~~~~~~~~~~ 93 (1610)
.+.+++.+.+...|.+|.++|.+.++......++. ...+...+.+++.|.|..++..++.++..+++..+. .+...
T Consensus 10 ~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~---~~~~~ 86 (1230)
T 1u6g_C 10 NLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE---YQVET 86 (1230)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH---HHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH---HHHHH
T ss_conf 999755898785999999999999741665787567999999999986699989999999999999975879---89999
Q ss_pred HHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999842038-985369999999999994300------------2339999999740-177121879999999999972
Q 000369 94 VCDAIAAKCLT-GRPKTVEKAQAVFMLWVELEA------------VDVFLDVMEKAIK-NKVAKAVVPAIDVMFQALSEF 159 (1610)
Q Consensus 94 v~~~lveK~l~-~k~~~k~~a~~~ll~~~e~~~------------~~~v~~~l~~~~~-~KnpKv~~~~l~~l~~~l~~f 159 (1610)
+++.+++- +. ..+.+|..+..++-.+++.-. ...++..|..++. +.++.++.+++.++.+++..+
T Consensus 87 i~~~Ll~~-l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~ 165 (1230)
T 1u6g_C 87 IVDTLCTN-MLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQ 165 (1230)
T ss_dssp HHHHHHHH-TTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999998-66983889999999999999967974444411788999999999998757884679999999999999982
Q ss_pred CCCCCC-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 989769-2668873245317999779999999999999861970223789612819999999999970479988864003
Q 000369 160 GAKIIP-PKRILKMLPELFDHQDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELEVELVNVSGTARPTRKIR 238 (1610)
Q Consensus 160 G~~~i~-~k~il~~l~~ll~~~d~~VR~~a~~l~~ely~~~G~~~~~~~l~~~Lkp~q~kel~~~f~~~~~~~~p~r~~r 238 (1610)
|....+ ...+++.+.+.+.|.+..||..+...+..+....++.. +..+-+..+..|.. .
T Consensus 166 ~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~-----~~~~l~~l~~~L~~---~------------ 225 (1230)
T 1u6g_C 166 GGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIV-----FVDLIEHLLSELSK---N------------ 225 (1230)
T ss_dssp CSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC---------CTTHHHHHHHHHHH---T------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH-----HHHHHHHHHHHHCC---C------------
T ss_conf 767788799999999998759968999999999999998568999-----99999999998616---7------------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHC-CCC
Q ss_conf 5664864110012589999998888899988997668894443575851003343106994999999999999744-899
Q 000369 239 AEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAS-TKR 317 (1610)
Q Consensus 239 s~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~d~~~~vdIl~kl~~~~f~~~l~s~kW~~R~eaL~~L~~l~~-~~k 317 (1610)
.+|..|..+++.+..++. .++
T Consensus 226 ----------------------------------------------------------~~~~~r~~a~~~l~~l~~~~~~ 247 (1230)
T 1u6g_C 226 ----------------------------------------------------------DSMSTTRTYIQCIAAISRQAGH 247 (1230)
T ss_dssp ----------------------------------------------------------CSSCSCTTHHHHHHHHHHHSSG
T ss_pred ----------------------------------------------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_conf ----------------------------------------------------------7556899999999999998689
Q ss_pred CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 89999589999998770676999999999999999987201000336658999999812171899999999999999836
Q 000369 318 IAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAG 397 (1610)
Q Consensus 318 i~~~~~~~l~~~L~~~i~D~N~~v~~~A~~~i~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~al~ai~~~~ 397 (1610)
.......++++.+...+.|.+..|+..++.+++.+++.++..|.+|...++|.++..+........+.-....+.+ ..
T Consensus 248 ~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~~~~~~~~~~l~~li~~ll~~l~~d~~~~~~~d~~~~~~~-~~- 325 (1230)
T 1u6g_C 248 RIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAM-DA- 325 (1230)
T ss_dssp GGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CC-
T ss_conf 8998899999999998668977899999999999999784877776899999999982789988876441101122-33-
Q ss_pred CCCHHHHH--HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99957569--9999975218948999999999999970793698775443799999760389968999999999999998
Q 000369 398 CLNLVDVV--EDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKS 475 (1610)
Q Consensus 398 ~~~l~~il--~~i~~~l~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~~~ 475 (1610)
...-+... ++....-.+..|.+|..++..+..+....+ ..+..++..++|.+...+.|++++||.++..+++.+...
T Consensus 326 ~~~~~~~~~~~~~~~~~~d~~~~vR~~A~~~l~~l~~~~~-~~~~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~ 404 (1230)
T 1u6g_C 326 DGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRH-EMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQ 404 (1230)
T ss_dssp -------------------CTTHHHHHHHHHHHHHHTTCC-TTHHHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 4465301100136664555677999999999999997466-679999999989999871798657999999999999997
Q ss_pred HCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 08825788565202999999999982389999988887534688999998778752010010001257999999888877
Q 000369 476 VGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASK 555 (1610)
Q Consensus 476 ~G~~~~~~~l~~Ld~~~~kki~e~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~ 555 (1610)
.|... ... .+ + . ..+
T Consensus 405 ~~~~~--~~~---------------~~---------~---~--------------------------~~~---------- 419 (1230)
T 1u6g_C 405 TRPVQ--SWL---------------CD---------P---D--------------------------AME---------- 419 (1230)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred HCCCC--CCC---------------CC---------C---C--------------------------CCC----------
T ss_conf 24243--434---------------67---------5---2--------------------------013----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 8999988888899987757767789988898999998899997112938899773048968999999999999985025-
Q 000369 556 KGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQN- 634 (1610)
Q Consensus 556 ~~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~~~L~~~i~~~~~- 634 (1610)
+..-....+...+ +.+-+.+...|.+.+|+.|..++..+..++.....
T Consensus 420 ------------------------------~~~~~~~~~~~~l-~~ll~~l~~~l~~~~~~vr~~~~~~L~~l~~~~~~~ 468 (1230)
T 1u6g_C 420 ------------------------------QGETPLTMLQSQV-PNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGA 468 (1230)
T ss_dssp -------------------------------CCCHHHHHHHHT-THHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTT
T ss_pred ------------------------------CCCCHHHHHHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_conf ------------------------------5645599999874-699999999861377879999999999999976110
Q ss_pred CCHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 6546899999963298877607--99999999999999997299851459998888884210501029999999999963
Q 000369 635 LDQSVEILVRLVCMLPGWSEKN--VQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSEA 712 (1610)
Q Consensus 635 ~~~~~~~lv~~l~~~pg~~DsN--~~V~~~~l~~l~~l~~~~~~~~~~~~~~il~~LieKlgd~K~r~~a~~~L~~l~e~ 712 (1610)
.....+.++..+.. .+.|.+ ..+...++..+..++ +.
T Consensus 469 l~~~l~~ll~~l~~--~L~d~~~~~~v~~~a~~~l~~~~---------------------------------------~~ 507 (1230)
T 1u6g_C 469 LTQHIPVLVPGIIF--SLNDKSSSSNLKIDALSCLYVIL---------------------------------------CN 507 (1230)
T ss_dssp TGGGHHHHHHHHHH--HTTCSSSCHHHHHHHHHHHHHHH---------------------------------------HS
T ss_pred HHHHHHHHHHHHHH--HHCCCCCCCHHHHHHHHHHHHHH---------------------------------------HH
T ss_conf 57779999999999--97487885168999999999999---------------------------------------83
Q ss_pred HCHH-------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC------CCCC--HHHHHHHHHHCCC--CCCCHHH
Q ss_conf 0814-------48999996441088976899999999999998297------9988--4769999875077--8981779
Q 000369 713 VGPG-------FIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGV------SHLK--LKDLIDFCKDTGL--QSSAAAT 775 (1610)
Q Consensus 713 ~~~~-------~v~~~l~~~~~~~KnpKv~~~~l~~L~~~i~~fg~------~~l~--~k~li~~l~~~~l--~~~n~~V 775 (1610)
.+++ .+++.++.. ..+++++++.+++..+..+++.+|. ..+. +..+++.+... + .+.++.|
T Consensus 508 ~~~~~~~~~l~~llp~L~~~-l~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~ll~~ll~~-l~~~d~~~~v 585 (1230)
T 1u6g_C 508 HSPQVFHPHVQALVPPVVAC-VGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKR-LKAADIDQEV 585 (1230)
T ss_dssp SCGGGGHHHHTTTHHHHHHH-HTCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHHHHHHHHHHHH-HSCSSSCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH-HHCCCCCHHH
T ss_conf 89887886799999999999-714246899999999999998716755565323278999999999998-7326998899
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999996629129974310329999999998700899998998765--56766768899999999884542113
Q 000369 776 RNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKT--VRASESTSSVSSGGSDGLPREDISGK 853 (1610)
Q Consensus 776 R~aA~~ll~~Ly~~~G~~l~~~l~~lkp~ll~~L~~ef~k~~~~~~~~p~r~--~r~~~~~~~~~~~~~d~~pr~dIs~~ 853 (1610)
|.+|+.+++.|....|+.+..++..+-|.++..+..+. +|. .+.-..... +....+ -..+...
T Consensus 586 r~~a~~~lg~L~~~~g~~~~~~~~~~l~~L~~~l~~e~-----------~r~~~~~al~~i~~-~~~~~~---~~~~~~~ 650 (1230)
T 1u6g_C 586 KERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEI-----------TRLTTVKALTLIAG-SPLKID---LRPVLGE 650 (1230)
T ss_dssp HHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHTTSSS-----------HHHHHHHHHHHHTT-CSSCCC---CHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH-----------HHHHHHHHHHHHHH-CCCCCC---HHHHHHH
T ss_conf 99999999999998270324438899999998844530-----------59999999999981-856443---6888999
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH---HCCCCCCHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 425798512999926899999999999997021589998236899998---50134117699999999999999809237
Q 000369 854 FTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLR---GRLYDSNKNLVMATLITLGAVASAMGPAV 930 (1610)
Q Consensus 854 l~~~ll~~l~d~~Wk~R~eal~~l~~ll~~a~~~i~~~~~~eL~~~L~---~~L~Dsn~~v~~~al~~i~~la~alg~~~ 930 (1610)
+.+.+...+.+.+|..|..++..+..++......+. ...+...|. ..+.|.+..+...++.++..++...+..+
T Consensus 651 i~~~L~~~l~~~~~~~r~~a~~al~~l~~~~~~~~~---~~~v~~~l~~ll~ll~~~D~~~~~~~~~~L~~l~~~~~~~~ 727 (1230)
T 1u6g_C 651 GVPILASFLRKNQRALKLGTLSALDILIKNYSDSLT---AAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSL 727 (1230)
T ss_dssp HHHHHHHHTTSCCHHHHHHHHHHHHHHHHHCCTTCC---HHHHHHHHTTCGGGSCTTCHHHHHHHHHHHHHHTTSCGGGG
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 999999999867888999999999999960433389---89999999998763575418789999999999988491267
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 87566489999998187808899999999999999659310279999998328679536999999999986269999863
Q 000369 931 EKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHLDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDA 1010 (1610)
Q Consensus 931 ~~~~~~llp~ll~~l~D~k~~Vr~aa~~aL~~~~~~~~l~~~l~~l~~~L~~~~~~~~~R~~~l~~L~~~l~~~~~~~~~ 1010 (1610)
.++...+++.++..+.... ........++...............+
T Consensus 728 ~~~~~~~l~~~~~~l~~~~-----------------------------------~~~~~~~~l~~~~~~l~~~~~~~~~~ 772 (1230)
T 1u6g_C 728 SKISGSILNELIGLVRSPL-----------------------------------LQGGALSAMLDFFQALVVTGTNNLGY 772 (1230)
T ss_dssp GGTTTTTHHHHHHHHTCTT-----------------------------------CCHHHHHHHHHHHHHHHTTCCTTCSH
T ss_pred HHHHHHHHHHHHHHHCCCC-----------------------------------CCHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 7767768999999975862-----------------------------------10578999999999998347887889
Q ss_pred HHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 5438999972178-----99789999999999999970958899874017905799999999631789888899998888
Q 000369 1011 AHLLKPASIAMTD-----KSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPALALILERIKLNGASQVSMGPTSKSSS 1085 (1610)
Q Consensus 1011 ~~~l~~l~~~L~D-----~~~dVR~aA~~~l~~l~~~~g~~~~~~~~~~L~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 1085 (1610)
.+++..+...+.. ....+|..+..+++.+....|.... ..+..+-. ..+
T Consensus 773 ~~ll~~l~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~-~~~~~~~~-----------~~~-------------- 826 (1230)
T 1u6g_C 773 MDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGP-AVVGQFIQ-----------DVK-------------- 826 (1230)
T ss_dssp HHHHHHHSTTTTTC----CCHHHHHHHHHHHHHHHHHSCCCSH-HHHTTTTT-----------TTT--------------
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHH-----------HHC--------------
T ss_conf 9999998500357887320001048999999999984656668-99999999-----------837--------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 88888888887789888866678888888887544310221100012467998588864210334455899246999999
Q 000369 1086 KVPKSASNGVSKHGNRAISSRVIPTKGARPESIMSVQDFAVQSQALLNVKDSNKEDRERMVVRRFKFEDPRIEQIQELEN 1165 (1610)
Q Consensus 1086 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~R~~~~~~k~~~~~~~~e~~e~L~~ 1165 (1610)
. + . . ......-.+..+ ++-.+ ..-|. +.++ +.
T Consensus 827 -----~-----------~-------~----~------~~~~~~~~l~~l---~~~g~----~~~~~---~~~~----l~- 858 (1230)
T 1u6g_C 827 -----N-----------S-------R----S------TDSIRLLALLSL---GEVGH----HIDLS---GQLE----LK- 858 (1230)
T ss_dssp -----T-----------T-------T----C------CHHHHHHHHHHH---HHHHH----HSCCC---SCTH----HH-
T ss_pred -----C-----------C-------C----C------CHHHHHHHHHHH---HHHCC----CCCCC---CCCC----HH-
T ss_conf -----8-----------8-------7----6------679999999999---98615----67876---5641----89-
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99854109999841651199899999999984688746799988799979877406776899999996899999998635
Q 000369 1166 DMMKYFREDLHRRLLSTDFKKQVDGLEMLQKALPSIRKDIIEVLDILLRWFVLQFCKSNTTCLLKVLEFLPELFDTLRDE 1245 (1610)
Q Consensus 1166 q~~~~~~~~l~~~lfs~d~~~~~~~i~~L~~~~~~~~~~~~~~lDlilk~~~~r~~dtN~~v~~k~Le~l~~l~~~l~~~ 1245 (1610)
..+...+.+.+...|..|...|-... ..+++.++.++.-.+.+. +..-...+..|.+++... .
T Consensus 859 -------~~~~~~l~~~~~~Vr~aAa~aLg~l~-------~~~~~~~lp~ll~~l~~~-~~~~~~~l~al~e~i~~~--~ 921 (1230)
T 1u6g_C 859 -------SVILEAFSSPSEEVKSAASYALGSIS-------VGNLPEYLPFVLQEITSQ-PKRQYLLLHSLKEIISSA--S 921 (1230)
T ss_dssp -------HHHHHGGGCSCHHHHHHHHHHHHHHH-------HHTHHHHHHHHHHHHHSC-GGGHHHHHHHHHHHHHSS--C
T ss_pred -------HHHHHHHCCCCHHHHHHHHHHHHHHH-------CCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHCC--C
T ss_conf -------99999847997789999999968775-------269998899999987266-032498899999998238--7
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 88877877984367999831898378999999999999840782120999970005886465999999999999861777
Q 000369 1246 GYSLTESEAAVFLPCLVEKSGHNIEKVREKMRELTKQIVNFYSATKTLPYILEGLRSKNNRTRIECVDLVGFLIDHHGAE 1325 (1610)
Q Consensus 1246 ~y~l~~~ea~~~lp~li~K~Gd~k~~vr~~v~~il~~~~~~~~~~kvf~~l~~gl~sKn~r~r~ecl~~l~~li~~~g~~ 1325 (1610)
...+.. .+..++|.|+..+++.-+.+|..+..++..+..+.+ ..++|.|.+.+++.|+.+|.-|+.-+.+++...|..
T Consensus 922 ~~~~~~-~~~~i~~~L~~~~~~~~~~~r~~~a~~lg~l~~~~~-~~l~p~l~~~l~~~~~~~R~~~~~~l~~~~~~~~~~ 999 (1230)
T 1u6g_C 922 VVGLKP-YVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDP-ETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQP 999 (1230)
T ss_dssp STTTHH-HHHHHHHHHTTCCCCSSTTHHHHHHHHHHHHHHSSG-GGTHHHHTTTSSSSCHHHHHHHHHHTGGGCCSSCCT
T ss_pred HHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHH
T ss_conf 666776-699999999987338304468999988756650676-888899999856997889999999999997068233
Q ss_pred CCCCCCHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
Q ss_conf 64400049-9999530379667899999999999986086799985049
Q 000369 1326 ISGQLKSL-QIVASLTAERDGEIRKAALNTLATGYKILGEDIWRYVGKL 1373 (1610)
Q Consensus 1326 ~~~~~k~l-~~ia~~i~drd~~VR~aAl~~l~~~y~~~G~~v~~~ig~l 1373 (1610)
.-...+.+ +.+-.++.|.|..||.+|+.+|.++-...++.++.+++.+
T Consensus 1000 ~~~~l~~~~~~ll~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~l~~~ 1048 (1230)
T 1u6g_C 1000 IDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTV 1048 (1230)
T ss_dssp HHHHHHHHSTTTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 5898999899999864898587999999999999842857689779889
No 5
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=1.00 E-value=1 Score=266.76 Aligned_cols=939 Identities=14% Similarity=0.130 Sum_probs=466.8
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHH------HHH
Q ss_conf 23320577546889999999998400289986245412212576404886999999999999999970421------100
Q 000369 16 WEDRLLHKNWKVRNEANIDLAALCDSITDPKDNRIRELGPLFKKTVADSNAPVQDKALDALIAYLKAADAD------AGR 89 (1610)
Q Consensus 16 l~~~l~~k~WK~R~~ayeel~~~~~~~~~~~~~~~~~~~~~~~k~v~DsN~~~q~~~leal~~~v~~~~~~------~~~ 89 (1610)
+.+.+.+++|+.|..|...+...+....+ +.+....+.+...+.|.+..++..+..++..+....+.. ...
T Consensus 53 Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~---~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~ 129 (1230)
T 1u6g_C 53 ILKLLEDKNGEVQNLAVKCLGPLVSKVKE---YQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAAN 129 (1230)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHTTSCH---HHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 99986699989999999999999975879---899999999999866983889999999999999967974444411788
Q ss_pred HHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 358899999842038--985369999999999994300------233999999974017712187999999999997298
Q 000369 90 YAKEVCDAIAAKCLT--GRPKTVEKAQAVFMLWVELEA------VDVFLDVMEKAIKNKVAKAVVPAIDVMFQALSEFGA 161 (1610)
Q Consensus 90 ~~~~v~~~lveK~l~--~k~~~k~~a~~~ll~~~e~~~------~~~v~~~l~~~~~~KnpKv~~~~l~~l~~~l~~fG~ 161 (1610)
+..+++|.|++- +. ..+.++..|.+++..+++... .+.+++.+...+.+.++.++..++.++..+....+.
T Consensus 130 ~~~~llp~L~~~-l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~ 208 (1230)
T 1u6g_C 130 VCKKITGRLTSA-IAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGN 208 (1230)
T ss_dssp HHHHHHHHHHHH-HSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC--
T ss_pred HHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
T ss_conf 999999999998-7578846799999999999999827677887999999999987599689999999999999985689
Q ss_pred CCCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHH---------------HHHH
Q ss_conf 976926688732453179-997799999999999998619702237896128199999999---------------9997
Q 000369 162 KIIPPKRILKMLPELFDH-QDQNVRASSKGLTLELCRWIGKDPVKTILFEKMRDTMKKELE---------------VELV 225 (1610)
Q Consensus 162 ~~i~~k~il~~l~~ll~~-~d~~VR~~a~~l~~ely~~~G~~~~~~~l~~~Lkp~q~kel~---------------~~f~ 225 (1610)
.. ...+++.+...+.+ .+..+|..+..+++++++.+|.. +.+++ ..+-|..++.+. ....
T Consensus 209 ~~--~~~~l~~l~~~L~~~~~~~~r~~a~~~l~~l~~~~~~~-~~~~l-~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~ 284 (1230)
T 1u6g_C 209 IV--FVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHR-IGEYL-EKIIPLVVKFCNVDDDELREYCIQAFESFVR 284 (1230)
T ss_dssp ----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGG-GTTSC-TTHHHHHHHHHSSCCTTTHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 99--99999999998616775568999999999999986898-99889-9999999998668977899999999999999
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHCCCCHHHHHH
Q ss_conf 047998886400356648641100125899999988888999889976688-9444357585100334310699499999
Q 000369 226 NVSGTARPTRKIRAEQDKELGQELISEDVGPGPSEESTADVPPEIDEYELV-DPVDILTPLEKSGFWEGVKATKWSERKD 304 (1610)
Q Consensus 226 ~~~~~~~p~r~~rs~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~d~~-~~vdIl~kl~~~~f~~~l~s~kW~~R~e 304 (1610)
..+....| ++..--. ..-.....++... .+......+..+-. ...+. ... .+.|....+..|+.|..
T Consensus 285 ~~~~~~~~--~l~~li~------~ll~~l~~d~~~~-~~~d~~~~~~~~~~~~~~~~-~~~--~~~~~~~~d~~~~vR~~ 352 (1230)
T 1u6g_C 285 RCPKEVYP--HVSTIIN------ICLKYLTYDPNYN-YDDEDEDENAMDADGGDDDD-QGS--DDEYSDDDDMSWKVRRA 352 (1230)
T ss_dssp CTTCCCHH--HHHHHHH------HHTTCCCCC----------------------------------------CTTHHHHH
T ss_pred HCHHHHHH--HHHHHHH------HHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCH-HHC--CCCCCCCCCCCHHHHHH
T ss_conf 78487777--6899999------9999827899888-76441101122334465301-100--13666455567799999
Q ss_pred HHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-------------------CCHHHH
Q ss_conf 9999999744-89989999589999998770676999999999999999987201-------------------000336
Q 000369 305 AVAELTKLAS-TKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRT-------------------HFSGSS 364 (1610)
Q Consensus 305 aL~~L~~l~~-~~ki~~~~~~~l~~~L~~~i~D~N~~v~~~A~~~i~~La~~L~~-------------------~f~~~~ 364 (1610)
|+..+..++. .+......+..++..|...+.|.+..|+..++.++..+...++. .+.++.
T Consensus 353 A~~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 432 (1230)
T 1u6g_C 353 AAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQV 432 (1230)
T ss_dssp HHHHHHHHHTTCCTTHHHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHT
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999974666799999999899998717986579999999999999972424343467520135645599999874
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCCHHH
Q ss_conf 6589999998121718999999999999998369----9957569999997521894--899999999999997079369
Q 000369 365 RFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGC----LNLVDVVEDVKTSVKNKVP--LVRSLTLNWVTFCIETSSKAA 438 (1610)
Q Consensus 365 ~~llp~LL~klkdkk~~V~~aa~~al~ai~~~~~----~~l~~il~~i~~~l~~Knp--~vR~~~l~~L~~~l~~~~~~~ 438 (1610)
..++|.++..+.+....+|.++..++..++.... ..+..+++.+...++++++ .+|.+++.++..++...++..
T Consensus 433 ~~ll~~l~~~l~~~~~~vr~~~~~~L~~l~~~~~~~l~~~l~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~~~~~~ 512 (1230)
T 1u6g_C 433 PNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQV 512 (1230)
T ss_dssp THHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTTTGGGHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCGGG
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_conf 69999999986137787999999999999997611057779999999999974878851689999999999998389887
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC------HHHHHHHHHCCHHHHHHHH-------------HH
Q ss_conf 8775443799999760389968999999999999998088------2578856520299999999-------------99
Q 000369 439 VLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGM------RPLERSIEKLDDVRRNKLS-------------EM 499 (1610)
Q Consensus 439 l~~~l~~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~~~~G~------~~~~~~l~~Ld~~~~kki~-------------e~ 499 (1610)
+.++++.++|.+..++.|.+..||..+..+++.+.+.+|. ..+.+|++.+-+.-...+. .+
T Consensus 513 ~~~~l~~llp~L~~~l~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~d~~~~vr~~a~~~ 592 (1230)
T 1u6g_C 513 FHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISC 592 (1230)
T ss_dssp GHHHHTTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 88679999999999971424689999999999999871675556532327899999999999873269988999999999
Q ss_pred H----HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8----238999998888753468899999877875201001000125799999988887789999888888999877577
Q 000369 500 I----AGSGGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETS 575 (1610)
Q Consensus 500 ~----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~~~~s 575 (1610)
+ ...|..- .+ .- +...+.- .... ..+.. +..... +......+
T Consensus 593 lg~L~~~~g~~~---~~--------------~~--~~~l~~L-~~~l--~~e~~-----------r~~~~~-al~~i~~~ 638 (1230)
T 1u6g_C 593 MGQIICNLGDNL---GS--------------DL--PNTLQIF-LERL--KNEIT-----------RLTTVK-ALTLIAGS 638 (1230)
T ss_dssp HHHHHHHTGGGC---CT--------------HH--HHHHHHH-HHHT--TSSSH-----------HHHHHH-HHHHHTTC
T ss_pred HHHHHHHHCCHH---HH--------------HH--HHHHHHH-HHHH--CCCHH-----------HHHHHH-HHHHHHHC
T ss_conf 999999827032---44--------------38--8999999-9884--45305-----------999999-99999818
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC-CCCCCC
Q ss_conf 6778998889899999889999711293889977304896899999999999998502565468999999632-988776
Q 000369 576 KLTEAPEDVEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCM-LPGWSE 654 (1610)
Q Consensus 576 ~~~~~~~~~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~~~L~~~i~~~~~~~~~~~~lv~~l~~-~pg~~D 654 (1610)
.. +..+ +.... -+-+.+...+.+.+|..|..+++.+...+....... ..+.+..++.. .|.+.|
T Consensus 639 ~~--------~~~~--~~~~~----~i~~~L~~~l~~~~~~~r~~a~~al~~l~~~~~~~~-~~~~v~~~l~~ll~ll~~ 703 (1230)
T 1u6g_C 639 PL--------KIDL--RPVLG----EGVPILASFLRKNQRALKLGTLSALDILIKNYSDSL-TAAMIDAVLDELPPLISE 703 (1230)
T ss_dssp SS--------CCCC--HHHHH----HHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHCCTTC-CHHHHHHHHTTCGGGSCT
T ss_pred CC--------CCCH--HHHHH----HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHCCC
T ss_conf 56--------4436--88899----999999999986788899999999999996043338-989999999998763575
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH----HHCHHHHHHHHHHHHH---
Q ss_conf 079999999999999999729985145999888888421050102999999999996----3081448999996441---
Q 000369 655 KNVQVQQQVIEVINYLAATATKFPKKCVVLCLLGISERVADIKTRAHAMKCLTTFSE----AVGPGFIFERLYKIMK--- 727 (1610)
Q Consensus 655 sN~~V~~~~l~~l~~l~~~~~~~~~~~~~~il~~LieKlgd~K~r~~a~~~L~~l~e----~~~~~~v~~~l~~~~~--- 727 (1610)
.+..+...+++++..++...+.....+...+++.++..+.+...+..+.+.+..+.. ...+...+..++..+.
T Consensus 704 ~D~~~~~~~~~~L~~l~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ll~~l~~~~ 783 (1230)
T 1u6g_C 704 SDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV 783 (1230)
T ss_dssp TCHHHHHHHHHHHHHHTTSCGGGGGGTTTTTHHHHHHHHTCTTCCHHHHHHHHHHHHHHHTTCCTTCSHHHHHHHHSTTT
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
T ss_conf 41878999999999998849126777677689999999758621057899999999999834788788999999985003
Q ss_pred ----------------------------------------CCC----CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf ----------------------------------------088----976899999999999998297998847699998
Q 000369 728 ----------------------------------------DHK----NPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFC 763 (1610)
Q Consensus 728 ----------------------------------------~~K----npKv~~~~l~~L~~~i~~fg~~~l~~k~li~~l 763 (1610)
.-+ +...+.-++..+.++....+... ...+++.+
T Consensus 784 ~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~--~~~l~~~~ 861 (1230)
T 1u6g_C 784 YSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSG--QLELKSVI 861 (1230)
T ss_dssp TTC----CCHHHHHHHHHHHHHHHHHSCCCSHHHHTTTTTTTTTTTCCHHHHHHHHHHHHHHHHHSCCCS--CTHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHH
T ss_conf 5788732000104899999999998465666899999999837887667999999999998615678765--64189999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75077898177999999999999966291299743103299999999987008999989987655676676889999999
Q 000369 764 KDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGSD 843 (1610)
Q Consensus 764 ~~~~l~~~n~~VR~aA~~ll~~Ly~~~G~~l~~~l~~lkp~ll~~L~~ef~k~~~~~~~~p~r~~r~~~~~~~~~~~~~d 843 (1610)
.++ +.+++..||.+|..++|.+... .+ ....|.+++.++.+ .+.++. ....++.- ... .+..+
T Consensus 862 ~~~-l~~~~~~Vr~aAa~aLg~l~~~---~~----~~~lp~ll~~l~~~-~~~~~~----~l~al~e~--i~~--~~~~~ 924 (1230)
T 1u6g_C 862 LEA-FSSPSEEVKSAASYALGSISVG---NL----PEYLPFVLQEITSQ-PKRQYL----LLHSLKEI--ISS--ASVVG 924 (1230)
T ss_dssp HHG-GGCSCHHHHHHHHHHHHHHHHH---TH----HHHHHHHHHHHHSC-GGGHHH----HHHHHHHH--HHS--SCSTT
T ss_pred HHH-HCCCCHHHHHHHHHHHHHHHCC---CH----HHHHHHHHHHHHCC-CHHHHH----HHHHHHHH--HHC--CCHHH
T ss_conf 998-4799778999999996877526---99----98899999987266-032498----89999999--823--87666
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98845421134257985129999268999999999999970215899982368999985013411769999999999999
Q 000369 844 GLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAVA 923 (1610)
Q Consensus 844 ~~pr~dIs~~l~~~ll~~l~d~~Wk~R~eal~~l~~ll~~a~~~i~~~~~~eL~~~L~~~L~Dsn~~v~~~al~~i~~la 923 (1610)
..| ....|.+.|+..+++.+|..|..+.+.++.++... ..++++.|..++.|.+..++..++.++..+.
T Consensus 925 ~~~---~~~~i~~~L~~~~~~~~~~~r~~~a~~lg~l~~~~--------~~~l~p~l~~~l~~~~~~~R~~~~~~l~~~~ 993 (1230)
T 1u6g_C 925 LKP---YVENIWALLLKHCECAEEGTRNVVAECLGKLTLID--------PETLLPRLKGYLISGSSYARSSVVTAVKFTI 993 (1230)
T ss_dssp THH---HHHHHHHHHTTCCCCSSTTHHHHHHHHHHHHHHSS--------GGGTHHHHTTTSSSSCHHHHHHHHHHTGGGC
T ss_pred HHH---HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC--------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 776---69999999998733830446899998875665067--------6888899999856997889999999999997
Q ss_pred HHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHH----CCC-------------
Q ss_conf 980923787566489999998187808899999999999999659--3102799999983----286-------------
Q 000369 924 SAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVH--LDKMVPYVTTALT----DAK------------- 984 (1610)
Q Consensus 924 ~alg~~~~~~~~~llp~ll~~l~D~k~~Vr~aa~~aL~~~~~~~~--l~~~l~~l~~~L~----~~~------------- 984 (1610)
...+..+.+|.+.+++.++..+.|++..||.+|..+++.++.+.+ +...++.+.+.|- -+.
T Consensus 994 ~~~~~~~~~~l~~~~~~ll~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~l~~~lp~l~~~~~~~~~~~~~v~~gp~k~ 1073 (1230)
T 1u6g_C 994 SDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKH 1073 (1230)
T ss_dssp CSSCCTHHHHHHHHSTTTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTTSCCGGGEEEEEETTEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCC
T ss_conf 06823358989998999998648985879999999999998428576897798898999988302687601330589602
Q ss_pred ---CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
Q ss_conf ---79536999999999986269999863543899997217899789999999999999970958899874017
Q 000369 985 ---LGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDI 1055 (1610)
Q Consensus 985 ---~~~~~R~~~l~~L~~~l~~~~~~~~~~~~l~~l~~~L~D~~~dVR~aA~~~l~~l~~~~g~~~~~~~~~~L 1055 (1610)
.+-..|..+...+..++......-+..+++..+..+|.| +.|+|.-+...+..++..-+. .+...+..|
T Consensus 1074 ~vd~~l~~rk~a~~~~~~ll~~~~~~i~~~~~~~~~~~gl~d-~~di~~~~~~~l~~l~~~~~~-~~~~~~~~~ 1145 (1230)
T 1u6g_C 1074 TVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKD-HYDIKMLTFLMLVRLSTLCPS-AVLQRLDRL 1145 (1230)
T ss_dssp EEETHHHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHTTSS-CHHHHHHHHHHHHHHHHSCCH-HHHTTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHCCHH-HHHHHHHHH
T ss_conf 367748999999999999999888747899999999804676-688999999999999840879-899999999
No 6
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=265.81 Aligned_cols=231 Identities=29% Similarity=0.466 Sum_probs=217.1
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCC-CCCHHHHHHHHHH
Q ss_conf 97668894443575851003343106994999999999999744-899899995899999987706-7699999999999
Q 000369 271 DEYELVDPVDILTPLEKSGFWEGVKATKWSERKDAVAELTKLAS-TKRIAPGDFTEVCRTLKKLIT-DVNIAVAVEAIQA 348 (1610)
Q Consensus 271 d~~d~~~~vdIl~kl~~~~f~~~l~s~kW~~R~eaL~~L~~l~~-~~ki~~~~~~~l~~~L~~~i~-D~N~~v~~~A~~~ 348 (1610)
||||+++++||+++++ +.|++.+.+++|++|++|+..|..++. ++++...+|.+++..|.+.+. |.|..|+..|+.+
T Consensus 2 d~~d~~~~~di~~~l~-~~l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~ 80 (242)
T 2qk2_A 2 SHMDLLDPVDILSKMP-KDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVITKDSNVVLVAMAGKC 80 (242)
T ss_dssp HHHHTTSCBCCGGGSC-TTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred CHHHHCCCCCCCCCCC-HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 8777388653200179-899966263878999999999999871288888777999999999984568989999999999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 99999872010003366589999998121718999999999999998369995756999999752189489999999999
Q 000369 349 IGNLARGLRTHFSGSSRFLLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLVDVVEDVKTSVKNKVPLVRSLTLNWVT 428 (1610)
Q Consensus 349 i~~La~~L~~~f~~~~~~llp~LL~klkdkk~~V~~aa~~al~ai~~~~~~~l~~il~~i~~~l~~Knp~vR~~~l~~L~ 428 (1610)
++.|+.++++.|++|+..++|.|+++++|+++.||+++..++.+++.. .++..+++.+..+++++||++|.+++.|+.
T Consensus 81 l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~--~~~~~ll~~l~~~l~~~~~~vr~~~l~~l~ 158 (242)
T 2qk2_A 81 LALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAS--TSLEAQQESIVESLSNKNPSVKSETALFIA 158 (242)
T ss_dssp HHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT--SCHHHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 999999986617989999999999997689889999999999999972--899999999999884898399999999999
Q ss_pred HHHHHCCHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf 999707936-9877544379999976038996899999999999999808825788565202999999999982389
Q 000369 429 FCIETSSKA-AVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSG 504 (1610)
Q Consensus 429 ~~l~~~~~~-~l~~~l~~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~~~~G~~~~~~~l~~Ld~~~~kki~e~~~~~~ 504 (1610)
+++..+++. .+..+++.++|.+.++++|++++||++|.++++.++..+|++.+.++++.|++.++++|++++++..
T Consensus 159 ~~l~~~~~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~~~~~~~l~~L~~~~~~~i~~~~~~a~ 235 (242)
T 2qk2_A 159 RALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDKAVTPLLADVDPLKMAKIKECQEKAE 235 (242)
T ss_dssp HHHTTCCGGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCHHHHGGGGTTSCHHHHHHHHHHHHHCC
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 99987188776689999999999988469985899999999999999849999999998527999999999998888
No 7
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=1.00 E-value=1 Score=247.53 Aligned_cols=581 Identities=14% Similarity=0.163 Sum_probs=381.8
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH--HHHCCHHHHHH
Q ss_conf 3343106994999999999999744-89989999589999998770676999999999999999987--20100033665
Q 000369 290 FWEGVKATKWSERKDAVAELTKLAS-TKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARG--LRTHFSGSSRF 366 (1610)
Q Consensus 290 f~~~l~s~kW~~R~eaL~~L~~l~~-~~ki~~~~~~~l~~~L~~~i~D~N~~v~~~A~~~i~~La~~--L~~~f~~~~~~ 366 (1610)
+...+.+.++..|+.++..|..++. .++........++..+.+.+.|....|+..|+.++..+++. .++.+.+|...
T Consensus 220 l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~ 299 (852)
T 4fdd_A 220 LFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPK 299 (852)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 99871799778999999999999985779899889999999998706996899999999999986036579887888988
Q ss_pred HHHHHHHHH-----------CC-----------CCHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 899999981-----------21-----------7189999999999999983-699957569999997521894899999
Q 000369 367 LLPVLLEKL-----------KE-----------KKPTVAESLTQTLQAMHKA-GCLNLVDVVEDVKTSVKNKVPLVRSLT 423 (1610)
Q Consensus 367 llp~LL~kl-----------kd-----------kk~~V~~aa~~al~ai~~~-~~~~l~~il~~i~~~l~~Knp~vR~~~ 423 (1610)
++|.++..+ .| ..-.+|.++..+++.+... +..-+..+++.+...+++.+|.+|..+
T Consensus 300 l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~~~~~l~~~l~~~l~~~~~~~R~aa 379 (852)
T 4fdd_A 300 LIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESG 379 (852)
T ss_dssp HHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 99999987578676799866984432224564011169999999999998746187899999999998559988999999
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCC
Q ss_conf 99999999707936987754437999997603899689999999999999980882578856520299999999998238
Q 000369 424 LNWVTFCIETSSKAAVLKVHKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGS 503 (1610)
Q Consensus 424 l~~L~~~l~~~~~~~l~~~l~~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~~~~G~~~~~~~l~~Ld~~~~kki~e~~~~~ 503 (1610)
+.+++...+..+. .+..+++.++|.+..++.|.++.||.++..+++.+...++.....++
T Consensus 380 ~~alg~i~~~~~~-~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~------------------- 439 (852)
T 4fdd_A 380 ILVLGAIAEGCMQ-GMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTY------------------- 439 (852)
T ss_dssp HHHHHHTTTTTHH-HHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTT-------------------
T ss_pred HHHHHHHHHCCHH-HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH-------------------
T ss_conf 9999999863568-89987999999999871799889999999999999988611047899-------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999888875346889999987787520100100012579999998888778999988888899987757767789988
Q 000369 504 GGDVATGTSSARVQTSGGSVPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPED 583 (1610)
Q Consensus 504 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~~~~s~~~~~~~~ 583 (1610)
T Consensus 440 -------------------------------------------------------------------------------- 439 (852)
T 4fdd_A 440 -------------------------------------------------------------------------------- 439 (852)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 89899999889999711293889977304896899999999999998502-56546899999963298877607999999
Q 000369 584 VEPSEMSLEEIESRLGSLIPADTVGQLKSAVWKERLEAISSLRQQVEAVQ-NLDQSVEILVRLVCMLPGWSEKNVQVQQQ 662 (1610)
Q Consensus 584 ~~~~~~s~ee~e~~~~~ll~~~l~~~L~s~~Wk~Rl~a~~~L~~~i~~~~-~~~~~~~~lv~~l~~~pg~~DsN~~V~~~ 662 (1610)
.+++ -+.++..|.+.++..|..+...+...++..+ ...+....++..|.. .+++.+......
T Consensus 440 -------~~~l--------l~~L~~~L~d~~~~vr~~a~~aL~~l~~~~~~~l~~~l~~ll~~L~~--~l~~~~~~~~~~ 502 (852)
T 4fdd_A 440 -------LKPL--------MTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVF--AFSKYQHKNLLI 502 (852)
T ss_dssp -------HHHH--------HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHH--HHHHCCHHHHHH
T ss_pred -------HHHH--------HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCHHHHHH
T ss_conf -------9999--------99999998589888999999999999997367667679999999999--998837479999
Q ss_pred HHHHHHHHHHHCCC-C-CHHHHHHHHHHHHHH---HCCC--HHHHHHHHHHHHHHHHHCHHHH--HHHHHHHHHCCCCHH
Q ss_conf 99999999997299-8-514599988888842---1050--1029999999999963081448--999996441088976
Q 000369 663 VIEVINYLAATATK-F-PKKCVVLCLLGISER---VADI--KTRAHAMKCLTTFSEAVGPGFI--FERLYKIMKDHKNPK 733 (1610)
Q Consensus 663 ~l~~l~~l~~~~~~-~-~~~~~~~il~~LieK---lgd~--K~r~~a~~~L~~l~e~~~~~~v--~~~l~~~~~~~KnpK 733 (1610)
.++++..++...+. + ...++..++|.++++ +.|. ..+ .+.+++..++...+..++ ++.+++.
T Consensus 503 ~~~ai~~l~~~~~~~~~~~~~~~~l~p~l~~~~~~l~d~~~~~~-~~~~~l~~i~~~~g~~~~~~~~~i~~~-------- 573 (852)
T 4fdd_A 503 LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLF-PLLECLSSVATALQSGFLPYCEPVYQR-------- 573 (852)
T ss_dssp HHHHHHHHHHHHGGGGCCHHHHHHHHHHHHHHHHHSCTTCTTHH-HHHHHHHHHHHHHGGGGHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_conf 99999999997424313678999988999999873330469999-999999999999748679889999999--------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 899999999999998297998847699998-7507789817799999999999996629129974310329999999998
Q 000369 734 VLSEGILWMVSAVEDFGVSHLKLKDLIDFC-KDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAE 812 (1610)
Q Consensus 734 v~~~~l~~L~~~i~~fg~~~l~~k~li~~l-~~~~l~~~n~~VR~aA~~ll~~Ly~~~G~~l~~~l~~lkp~ll~~L~~e 812 (1610)
++..+...+... ..... ... ++..+..+|..++.+++.+...+|..+..++.+
T Consensus 574 ----~~~~l~~~l~~~---------~~~~~~~~~-~~~~d~~~~~~~l~~l~~l~~~l~~~~~~~~~~------------ 627 (852)
T 4fdd_A 574 ----CVNLVQKTLAQA---------MLNNAQPDQ-YEAPDKDFMIVALDLLSGLAEGLGGNIEQLVAR------------ 627 (852)
T ss_dssp ----HHHHHHHHHHHH---------HHHHHCTTT-SCCCCTHHHHHHHHHHHHHHHHHGGGGHHHHHT------------
T ss_pred ----HHHHHHHHHHHH---------HHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC------------
T ss_conf ----999999999999---------875338866-688761199999999978999874769988367------------
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 70089999899876556766768899999999884542113425798512999926899999999999997021589998
Q 000369 813 YEKNPFEGTVVPKKTVRASESTSSVSSGGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAG 892 (1610)
Q Consensus 813 f~k~~~~~~~~p~r~~r~~~~~~~~~~~~~d~~pr~dIs~~l~~~ll~~l~d~~Wk~R~eal~~l~~ll~~a~~~i~~~~ 892 (1610)
..+.+-++..+.+++..+|..+...+..+.......+.+.
T Consensus 628 ---------------------------------------~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~- 667 (852)
T 4fdd_A 628 ---------------------------------------SNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPC- 667 (852)
T ss_dssp ---------------------------------------CCHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGTGGG-
T ss_pred ---------------------------------------CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf ---------------------------------------7189999998389984499999999999999816888987-
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHCC--
Q ss_conf 23689999850134117699999999999999809237875664899999981878--08899999999999999659--
Q 000369 893 TGELFGGLRGRLYDSNKNLVMATLITLGAVASAMGPAVEKSSKGVLSDILKCLGDN--KKHMRECTLTVLDAWLAAVH-- 968 (1610)
Q Consensus 893 ~~eL~~~L~~~L~Dsn~~v~~~al~~i~~la~alg~~~~~~~~~llp~ll~~l~D~--k~~Vr~aa~~aL~~~~~~~~-- 968 (1610)
+.++++.|...+.+.+..++..|+.+++.++..+|.++.+|+..+++.++..+.+. ...+++.+..++..+...++
T Consensus 668 l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~~~~~p~~~~il~~L~~~l~~~~~~~~~~~~a~~~igrl~~~~~~~ 747 (852)
T 4fdd_A 668 IADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQE 747 (852)
T ss_dssp HHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHGGGGGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHH
T ss_conf 99999999987694206899999999999999711767878999999999985799887207788999999999868897
Q ss_pred ----CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH---HHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----310279999998328679536999999999986269999863543899---9972178997899999999999999
Q 000369 969 ----LDKMVPYVTTALTDAKLGAEGRKDLFDWLSKQLTGLSGFPDAAHLLKP---ASIAMTDKSSDVRKAAEACIVEILR 1041 (1610)
Q Consensus 969 ----l~~~l~~l~~~L~~~~~~~~~R~~~l~~L~~~l~~~~~~~~~~~~l~~---l~~~L~D~~~dVR~aA~~~l~~l~~ 1041 (1610)
+..+++.+...|.... +.+.|..++..+...+...+.. ....+.. .+....+.+++.+..=...+..+-.
T Consensus 748 ~~~~l~~~~~~~~~~l~~~~-d~~e~~~a~~~l~~li~~~p~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 824 (852)
T 4fdd_A 748 VAPMLQQFIRPWCTSLRNIR-DNEEKDSAFRGICTMISVNPSG--VIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKN 824 (852)
T ss_dssp HGGGHHHHHHHHHHHHHTSC-SSHHHHHHHHHHHHHHHHCGGG--TGGGHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHCHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 67558999999999865366-6079999999999999869186--88889999999870689978999999999999987
Q ss_pred HHCHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 709588998740179057999999
Q 000369 1042 AGGQETIEKNLKDIQGPALALILE 1065 (1610)
Q Consensus 1042 ~~g~~~~~~~~~~L~~~~~~~i~~ 1065 (1610)
.+|.+....++..|+|..+..+..
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~ 848 (852)
T 4fdd_A 825 QVGDENWRRFSDQFPLPLKERLAA 848 (852)
T ss_dssp HHHHHHHHHHGGGCCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCHHHHHHHHH
T ss_conf 677201999987299999999998
No 8
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=1.00 E-value=1 Score=242.13 Aligned_cols=563 Identities=17% Similarity=0.170 Sum_probs=374.6
Q ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 003343106994999999999999744899899-9958999999877067699999999999999998720100033665
Q 000369 288 SGFWEGVKATKWSERKDAVAELTKLASTKRIAP-GDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSGSSRF 366 (1610)
Q Consensus 288 ~~f~~~l~s~kW~~R~eaL~~L~~l~~~~ki~~-~~~~~l~~~L~~~i~D~N~~v~~~A~~~i~~La~~L~~~f~~~~~~ 366 (1610)
..+...+.+.+|+.|..|+..+..+... +.+ ....+++..|...+ |.+..|+..++.+++.++..++.. .|...
T Consensus 13 ~~l~~~l~s~~~~~R~~A~~~l~~i~~~--~~~~~~~~~l~~~L~~~~-d~~~~vr~~~~~~L~~~~~~~~~~--~~~~~ 87 (588)
T 1b3u_A 13 AVLIDELRNEDVQLRLNSIKKLSTIALA--LGVERTRSELLPFLTDTI-YDEDEVLLALAEQLGTFTTLVGGP--EYVHC 87 (588)
T ss_dssp HHHHHHTTCSCHHHHHHHHHTHHHHHHH--SCHHHHHHTHHHHHHHTC-CCCHHHHHHHHHHHTTCSGGGTSG--GGGGG
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHCCCCH--HHHHH
T ss_conf 9999985062199999999719999998--697989998998898755-785899999999997787605859--89999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 899999981217189999999999999983699957----5699999975218948999999999999970793698775
Q 000369 367 LLPVLLEKLKEKKPTVAESLTQTLQAMHKAGCLNLV----DVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKV 442 (1610)
Q Consensus 367 llp~LL~klkdkk~~V~~aa~~al~ai~~~~~~~l~----~il~~i~~~l~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~ 442 (1610)
++|.|...+.+....||+++..++..+... .+.. .+++.+....++.++.+|..++..+..+....+.. .
T Consensus 88 ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~--~~~~~~~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~~~~----~ 161 (588)
T 1b3u_A 88 LLPPLESLATVEETVVRDKAVESLRAISHE--HSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSA----V 161 (588)
T ss_dssp GHHHHHHHTTSSCHHHHHHHHHHHHHHHTT--SCHHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHH----H
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHH----H
T ss_conf 899999987476079999999999999997--9999999999999999850777179999999999999856999----9
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44379999976038996899999999999999808825788565202999999999982389999988887534688999
Q 000369 443 HKDYVPICMECLNDGTPEVRDAAFSVLAAIAKSVGMRPLERSIEKLDDVRRNKLSEMIAGSGGDVATGTSSARVQTSGGS 522 (1610)
Q Consensus 443 l~~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~~~~G~~~~~~~l~~Ld~~~~kki~e~~~~~~~~~~~~~p~~~~~~~~~~ 522 (1610)
.+.++|.+..++.|.++.||.+|.++++.+....|.+.. .+.+-+ .+...+.. +.
T Consensus 162 ~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~---~~~l~~----~l~~~~~d---------~~--------- 216 (588)
T 1b3u_A 162 KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNV---KSEIIP----MFSNLASD---------EQ--------- 216 (588)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHH---HHTHHH----HHHHHHTC---------SC---------
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHH---HHHHHH----HHHHHHCC---------CC---------
T ss_conf 999999999984899788999999989999998167767---999999----99988249---------92---------
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 99877875201001000125799999988887789999888888999877577677899888989999988999971129
Q 000369 523 VPSVEASESSFVRKSAASMLSGKRPVSAAPASKKGGPVKPSAKKDGSGKQETSKLTEAPEDVEPSEMSLEEIESRLGSLI 602 (1610)
Q Consensus 523 ~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~~~~~~k~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~ee~e~~~~~ll 602 (1610)
..++..+....+. .. ..++.++.. +.+
T Consensus 217 ---------~~vr~~a~~~l~~--------------------------------l~--------~~~~~~~~~----~~~ 243 (588)
T 1b3u_A 217 ---------DSVRLLAVEACVN--------------------------------IA--------QLLPQEDLE----ALV 243 (588)
T ss_dssp ---------HHHHTTHHHHHHH--------------------------------HH--------HHSCHHHHH----HHT
T ss_pred ---------HHHHHHHHHHHHH--------------------------------HH--------HHCCHHHHH----HHH
T ss_conf ---------8899989999999--------------------------------99--------857988888----789
Q ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 38899773048968999999999999985025654689999996329887760799999999999999997299851459
Q 000369 603 PADTVGQLKSAVWKERLEAISSLRQQVEAVQNLDQSVEILVRLVCMLPGWSEKNVQVQQQVIEVINYLAATATKFPKKCV 682 (1610)
Q Consensus 603 ~~~l~~~L~s~~Wk~Rl~a~~~L~~~i~~~~~~~~~~~~lv~~l~~~pg~~DsN~~V~~~~l~~l~~l~~~~~~~~~~~~ 682 (1610)
.+-+...+.+.+|..|..+.+.+.......+.. ...+.++..+.. .++|.+..|...+...+..++...+.....
T Consensus 244 ~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~~~-~~~~~l~~~l~~--~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~-- 318 (588)
T 1b3u_A 244 MPTLRQAAEDKSWRVRYMVADKFTELQKAVGPE-ITKTDLVPAFQN--LMKDCEAEVRAAASHKVKEFCENLSADCRE-- 318 (588)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCHH-HHHHTHHHHHHH--HHTCSSHHHHHHHHHHHHHHHHTSCTTTHH--
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHCHHHHH--
T ss_conf 999999806997789999999999999981952-105589999999--858995899999998799999972744436--
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 99888888421050102999999999996308144899999644108897689999999999999829799884769999
Q 000369 683 VLCLLGISERVADIKTRAHAMKCLTTFSEAVGPGFIFERLYKIMKDHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDF 762 (1610)
Q Consensus 683 ~~il~~LieKlgd~K~r~~a~~~L~~l~e~~~~~~v~~~l~~~~~~~KnpKv~~~~l~~L~~~i~~fg~~~l~~k~li~~ 762 (1610)
... ...+++.+... .++.+|++|..++.++..+...+|... ....+++.
T Consensus 319 ~~~-----------------------------~~~l~p~l~~~-l~d~~~~vR~~a~~~l~~l~~~~~~~~-~~~~l~p~ 367 (588)
T 1b3u_A 319 NVI-----------------------------MSQILPCIKEL-VSDANQHVKSALASVIMGLSPILGKDN-TIEHLLPL 367 (588)
T ss_dssp HHH-----------------------------HHTHHHHHHHH-HTCSCHHHHHHHHTTGGGGHHHHCHHH-HHHHTHHH
T ss_pred HHH-----------------------------HHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_conf 579-----------------------------99999999998-619988999999999999988862767-88889999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87507789817799999999999996629129974310329999999998700899998998765567667688999999
Q 000369 763 CKDTGLQSSAAATRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYEKNPFEGTVVPKKTVRASESTSSVSSGGS 842 (1610)
Q Consensus 763 l~~~~l~~~n~~VR~aA~~ll~~Ly~~~G~~l~~~l~~lkp~ll~~L~~ef~k~~~~~~~~p~r~~r~~~~~~~~~~~~~ 842 (1610)
+... +.+.++.||.++...++.+...+|... +..
T Consensus 368 l~~~-l~d~~~~Vr~~a~~~l~~l~~~~~~~~--~~~------------------------------------------- 401 (588)
T 1b3u_A 368 FLAQ-LKDECPEVRLNIISNLDCVNEVIGIRQ--LSQ------------------------------------------- 401 (588)
T ss_dssp HHHH-HTCSCHHHHHHHHTTCHHHHHHSCHHH--HHH-------------------------------------------
T ss_pred HHHH-HCCCCHHHHHHHHHHHHHHHHHCCHHH--HHH-------------------------------------------
T ss_conf 9998-379836899999998999997549898--988-------------------------------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99884542113425798512999926899999999999997021589998236899998501341176999999999999
Q 000369 843 DGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNKILEEANKRIQPAGTGELFGGLRGRLYDSNKNLVMATLITLGAV 922 (1610)
Q Consensus 843 d~~pr~dIs~~l~~~ll~~l~d~~Wk~R~eal~~l~~ll~~a~~~i~~~~~~eL~~~L~~~L~Dsn~~v~~~al~~i~~l 922 (1610)
.+.+.+...+.|.+|++|..+++.+..+....+.... ...+++.+...+.|.+..|+..++.+++.+
T Consensus 402 ----------~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~~~~~~~~---~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l 468 (588)
T 1b3u_A 402 ----------SLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFF---DEKLNSLCMAWLVDHVYAIREAATSNLKKL 468 (588)
T ss_dssp ----------HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGC---CHHHHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf ----------8899999983599813999999999999988098989---999999999882598199999999999999
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC----HHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 99809237875664899999981878088999999999999996593----10279999998328679536999999999
Q 000369 923 ASAMGPAVEKSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAVHL----DKMVPYVTTALTDAKLGAEGRKDLFDWLS 998 (1610)
Q Consensus 923 a~alg~~~~~~~~~llp~ll~~l~D~k~~Vr~aa~~aL~~~~~~~~l----~~~l~~l~~~L~~~~~~~~~R~~~l~~L~ 998 (1610)
+..+|+.+ +...++|.+...+.|.+..+|..+..++..+...++. ..++|.+...+.++ ++.+|..++..+.
T Consensus 469 ~~~~~~~~--~~~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~l~d~--~~~Vr~~a~~~l~ 544 (588)
T 1b3u_A 469 VEKFGKEW--AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDP--VANVRFNVAKSLQ 544 (588)
T ss_dssp HHHHCHHH--HHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGCS--CHHHHHHHHHHHH
T ss_pred HHHHCCHH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHH
T ss_conf 99968445--7888999999983189879999999999999976698999999999998667899--8627999999999
Q ss_pred HHHCCCCCCCCHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 986269999863543899-99721789978999999999999
Q 000369 999 KQLTGLSGFPDAAHLLKP-ASIAMTDKSSDVRKAAEACIVEI 1039 (1610)
Q Consensus 999 ~~l~~~~~~~~~~~~l~~-l~~~L~D~~~dVR~aA~~~l~~l 1039 (1610)
......+.. ...+.+.| +...++|.+.+||.+|..++..+
T Consensus 545 ~l~~~~~~~-~~~~~~~p~l~~l~~d~d~~vr~~a~~al~~l 585 (588)
T 1b3u_A 545 KIGPILDNS-TLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585 (588)
T ss_dssp HHGGGSCHH-HHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHCHH-HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 999986536-45999999999874799666999999999976
No 9
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=236.98 Aligned_cols=228 Identities=15% Similarity=0.183 Sum_probs=209.7
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH-HHHHCCCCCC--CCCHHHHHHHHHHCC-CCCCHHHHHHH
Q ss_conf 9999988454211342579851299992689999999999-9997021589--998236899998501-34117699999
Q 000369 840 GGSDGLPREDISGKFTPTLVKSLESPDWKVRLESIEAVNK-ILEEANKRIQ--PAGTGELFGGLRGRL-YDSNKNLVMAT 915 (1610)
Q Consensus 840 ~~~d~~pr~dIs~~l~~~ll~~l~d~~Wk~R~eal~~l~~-ll~~a~~~i~--~~~~~eL~~~L~~~L-~Dsn~~v~~~a 915 (1610)
...|+++++||.++|+++|...+++++|++|++|++.|.. ++++ ++++. ...|++++..|++.+ +|+|..|+..|
T Consensus 3 ~~~d~~~~~~i~~kl~~~f~~~l~s~~w~eRk~al~~L~~~~~~~-~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A 81 (249)
T 2qk1_A 3 HMASMLPEETILDKLPKDFQERITSSKWKDRVEALEEFWDSVLSQ-TKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALA 81 (249)
T ss_dssp CSCCCCCCBCCGGGSCTTHHHHHTCSSHHHHHHHHHHHHHHTGGG-CCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHH
T ss_pred CHHHHCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 657616714665517720787851687999999999999999745-9865667423999999999983358989999999
Q ss_pred HHHHHHHHHHHC-HHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC------C-CHHHHHHHHHHHHCCCCC
Q ss_conf 999999999809-2378-756648999999818780889999999999999965------9-310279999998328679
Q 000369 916 LITLGAVASAMG-PAVE-KSSKGVLSDILKCLGDNKKHMRECTLTVLDAWLAAV------H-LDKMVPYVTTALTDAKLG 986 (1610)
Q Consensus 916 l~~i~~la~alg-~~~~-~~~~~llp~ll~~l~D~k~~Vr~aa~~aL~~~~~~~------~-l~~~l~~l~~~L~~~~~~ 986 (1610)
+++++.|+.+++ +.|. +|...++|.++.+++|+++.|++++..++++++.++ + ++.+++.+...|+++ +
T Consensus 82 ~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k--~ 159 (249)
T 2qk1_A 82 AQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHK--T 159 (249)
T ss_dssp HHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCS--S
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC--C
T ss_conf 99999999762654541878999999999987379779999999999999997301235776999999999987699--8
Q ss_pred HHHHHHHHHHHHHHHCCCCCC-----CCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHH
Q ss_conf 536999999999986269999-----863-54389999721789978999999999999997095889987401790579
Q 000369 987 AEGRKDLFDWLSKQLTGLSGF-----PDA-AHLLKPASIAMTDKSSDVRKAAEACIVEILRAGGQETIEKNLKDIQGPAL 1060 (1610)
Q Consensus 987 ~~~R~~~l~~L~~~l~~~~~~-----~~~-~~~l~~l~~~L~D~~~dVR~aA~~~l~~l~~~~g~~~~~~~~~~L~~~~~ 1060 (1610)
|++|.+++.|+.+++...+.. +.+ ..+++.+..+++|.+++||.+|.++++.++.++|++.+.+++..|++.++
T Consensus 160 ~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~~~~p~l~~Ld~~k~ 239 (249)
T 2qk1_A 160 PQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMNTFVKTLEHLDNLKR 239 (249)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSGGGHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 39999999999999987678506688987999999999986699899999999999999998197878999998708899
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999631
Q 000369 1061 ALILERIKLN 1070 (1610)
Q Consensus 1061 ~~i~~~l~~~ 1070 (1610)
++|.++++++
T Consensus 240 ~ki~~~~~~~ 249 (249)
T 2qk1_A 240 KKIEETVKTL 249 (249)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHCC
T ss_conf 9999987459
No 10
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=1.00 E-value=1 Score=232.25 Aligned_cols=177 Identities=14% Similarity=0.168 Sum_probs=94.0
Q ss_pred HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH-----HHHHHHH
Q ss_conf 10699499999999999974489989999589999998770676999999999999999987201000-----3366589
Q 000369 294 VKATKWSERKDAVAELTKLASTKRIAPGDFTEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFS-----GSSRFLL 368 (1610)
Q Consensus 294 l~s~kW~~R~eaL~~L~~l~~~~ki~~~~~~~l~~~L~~~i~D~N~~v~~~A~~~i~~La~~L~~~f~-----~~~~~ll 368 (1610)
+.+.+...|..+...+..++..- .+....+++..|...+.+.+..++..++.+++.+++..+..+. .+...++
T Consensus 99 l~~~~~~vr~~~a~~i~~ia~~~--~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il 176 (852)
T 4fdd_A 99 IGDSSPLIRATVGILITTIASKG--ELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMI 176 (852)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHT--TTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHH
T ss_conf 74998999999999999999864--8135689999999987099989999999999999998578756343133299999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99999812171899999999999999836----99957569999997521894899999999999997079369877544
Q 000369 369 PVLLEKLKEKKPTVAESLTQTLQAMHKAG----CLNLVDVVEDVKTSVKNKVPLVRSLTLNWVTFCIETSSKAAVLKVHK 444 (1610)
Q Consensus 369 p~LL~klkdkk~~V~~aa~~al~ai~~~~----~~~l~~il~~i~~~l~~Knp~vR~~~l~~L~~~l~~~~~~~l~~~l~ 444 (1610)
|.++..+++....||.++..++..++... ...+..+++.+...+++.++.+|..++..|..++...+ ..+..+++
T Consensus 177 ~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~-~~~~~~l~ 255 (852)
T 4fdd_A 177 PKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRM-DRLLPHMH 255 (852)
T ss_dssp HHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCH-HHHGGGHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCH-HHHHHHHH
T ss_conf 99999856797899999999999998646387998899999999987179977899999999999998577-98998899
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 37999997603899689999999999999
Q 000369 445 DYVPICMECLNDGTPEVRDAAFSVLAAIA 473 (1610)
Q Consensus 445 ~l~~~l~~~l~Ds~~~VR~aA~~~l~~l~ 473 (1610)
.+++.+.+++.|.+++||..|.+.+..+.
T Consensus 256 ~l~~~l~~~~~~~~~~vr~~a~e~l~~l~ 284 (852)
T 4fdd_A 256 NIVEYMLQRTQDQDENVALEACEFWLTLA 284 (852)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999998706996899999999999986
Done!