BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000377
(1605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust.
Identities = 340/773 (43%), Positives = 494/773 (63%), Gaps = 48/773 (6%)
Query: 849 SAKTKSVIELKKLQLLGLQRRLRNDFLN--DFFKPITTDMDRLKSYKKHRHGRRIKQLEK 906
+ K +++ELKKL+L+ Q LR+ ++ + I ++R+ + + + E
Sbjct: 192 TIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVERMSCRRPKLVPQATRLTEV 251
Query: 907 FEQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVKEFHKRKERIH 966
E++ + +R++R++++Q ++ + AH ++ K + R + N+ V +H E+
Sbjct: 252 LERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEE 311
Query: 967 REKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKLGS--KLQEAKS 1024
+ + +R ++++ LK ND E YL+++ AK R+ LL++T+ YL L + K+Q+++
Sbjct: 312 QRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAVKVQQSQF 371
Query: 1025 MASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYLESNEKYYLMAHSIKESVSEQPT 1084
S ++ +MD + P E++ + D YY +AH+I+E V+EQP+
Sbjct: 372 GESAYDEDMDR--------RMNP--EDDRKID-----------YYNVAHNIREVVTEQPS 410
Query: 1085 CLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFL 1144
L GGKL+EYQ+ GL+W++SLYNN LNGILADEMGLGKT+Q I+LI +L+E K GPFL
Sbjct: 411 ILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFL 470
Query: 1145 VVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNK 1204
V+VP S L W E WAP I KIVY GPP+ R+ L + + H F VLLTTYEY++
Sbjct: 471 VIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQ-VRHSNFQVLLTTYEYIIK- 528
Query: 1205 HDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSS-HRLLLTGTPLQNNLEELWAL 1263
DRP LS+I+W Y+IIDEGHR+KN KL L Y SS +RL+LTGTPLQNNL ELWAL
Sbjct: 529 -DRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWAL 587
Query: 1264 LNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRL 1323
LNF+LP IFNS + F +WFN PF + G D+ L+EEE+LL+I RLH+VLRPF+LRRL
Sbjct: 588 LNFVLPRIFNSIKSFDEWFNTPFANTG--GQDKMELTEEESLLVIRRLHKVLRPFLLRRL 645
Query: 1324 KHKVENELPEKIERLVRCEASAYQKLL--------MKRVEENLGSIGNSKGRSVHNSVME 1375
K VE ELP+K+E+++RC+ S Q+ L M VE+ G + + + N+VM+
Sbjct: 646 KKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVED--AKRGKTGIKGLQNTVMQ 703
Query: 1376 LRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFST 1434
L+ ICNHP++ + +D P + + R+ GK E+LDR+LPKL + HR+L F
Sbjct: 704 LKKICNHPFVFEDVERSID---PTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQ 760
Query: 1435 MTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVN 1494
MT+++++MEDYL ++Q+RYLRLDG T DR L+ FN + +FLLS RAGG+G+N
Sbjct: 761 MTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLN 820
Query: 1495 LQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGV 1554
LQ ADTVIIFD+DWNP DLQAQ RAHRIGQ ++V + R T ++VEE + A A++KL +
Sbjct: 821 LQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDI 880
Query: 1555 ANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPV---LDDDALNDLLAR 1604
+ I AG FDN ++ E+R +L SLL EE LDDD LN++LAR
Sbjct: 881 DGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDDDELNEILAR 933
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 603 bits (1556), Expect = e-171, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 475/777 (61%), Gaps = 56/777 (7%)
Query: 851 KTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMDRLKSYKKHRHGRRIKQ------- 903
K+KS+IEL+ L+LL QR LR + + D L + R +K+
Sbjct: 641 KSKSMIELRCLRLLEKQRSLR-----ETINSVIPHSDSLAAGNLRLMFRNVKRQTMQEAN 695
Query: 904 -LEKFEQKMKEERQKRIRERQKEFFSEIEAHKE----RLDEVFKIKRERWRGVNKYVKEF 958
+ +K K E R +E+ I H++ ++D+ K K +R + + F
Sbjct: 696 LVLALAEKQKTEHAMRQKEKLLTHLRSIMLHRKSIVTKVDKQNKAKTQRCKDI----INF 751
Query: 959 HKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKL--G 1016
H E+ +++I+R R+++ L+ +D YL+++ AK R+ LLK+T++YL+ L
Sbjct: 752 HAHLEKEEKKRIERSARQRLQALRADDEAAYLQLLDKAKDTRITHLLKQTDQYLENLTRA 811
Query: 1017 SKLQEAKSMASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYLESNEKYYLMAHSIK 1076
++Q++ + + + + + E + ED+ N Y+ +AH I
Sbjct: 812 VRIQQSNIHSGNTSGKGSNSAEL------EAPISEEDK----------NLDYFKVAHRIH 855
Query: 1077 ESVSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMET 1136
E V EQP GG L++YQ+ GL W++SLYNN LNGILADEMGLGKT+Q IA I YL+E
Sbjct: 856 EEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEK 914
Query: 1137 KNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLT 1196
KN +GPFL++VP S L W E WAP + KI Y GPP+ R+ L + +I FNVLLT
Sbjct: 915 KNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTL-QSQIRSSNFNVLLT 973
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLLTGTPLQN 1255
T+EY++ DRP LS+I+W ++IIDEGHRIKN KL + L +Y S +RL+LTGTPLQN
Sbjct: 974 TFEYIIK--DRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQN 1031
Query: 1256 NLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVL 1315
NL ELWALLNF+LP IFNS + F +WFN PF + G D+ L+EEE LLII RLH+VL
Sbjct: 1032 NLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQ--DKIGLNEEEALLIIKRLHKVL 1089
Query: 1316 RPFVLRRLKHKVENELPEKIERLVRCEASAYQ-KLLMKRVEENLGSIGNSKGRS----VH 1370
RPF+ RRLK VE ELP+K+E++++C S Q KL + + + + KG++ +
Sbjct: 1090 RPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKGLQ 1149
Query: 1371 NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVL 1430
N+VM+L+ ICNHP++ + +D L + R GK E+LDR+LPKL T H+ L
Sbjct: 1150 NTVMQLKKICNHPFIFEDVERAIDPSGTNVDL--LWRAAGKFELLDRILPKLFLTGHKTL 1207
Query: 1431 FFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGG 1490
F MT+++ +MEDYL K ++YLRLDG T DR +L+ +FN S +IF+LS RAGG
Sbjct: 1208 MFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGG 1267
Query: 1491 VGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEH 1550
+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQ ++V +LR T +++EE + + A++
Sbjct: 1268 LGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILSRAQY 1327
Query: 1551 KLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAAPV---LDDDALNDLLAR 1604
KL + + I AG FDN ++ E+R +L SLL ++ L DD LN+L++R
Sbjct: 1328 KLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQDDELNELISR 1384
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 344/850 (40%), Positives = 499/850 (58%), Gaps = 117/850 (13%)
Query: 842 VSSSEDISAKTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKK-HRHG- 898
+ SED+ + ++ IEL+ L++L QR+LR +F+ + T + +K YK+ R G
Sbjct: 431 ATMSEDL--RLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGL 488
Query: 899 RRIKQLEKFEQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVKEF 958
R + EK E++ K E +++ R++ EF + + H + L E + + + +NK V
Sbjct: 489 REARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAVMNH 548
Query: 959 H--------KRKERIHREKIDRIQ-------REKIN---------LLKIND--VEGYLRM 992
H K +ERI +E++ R+ R+ I+ LL D + +M
Sbjct: 549 HANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQM 608
Query: 993 VQDAKSDRVNKLLKETEKYLQ------------------------------KLGSKLQ-E 1021
V+ K D++ K +E ++ +Q G KL +
Sbjct: 609 VKQHKDDQMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGD 668
Query: 1022 AKSMASHFENEM----------DETQTVSVVEKYEPAVE-----NEDESDQAK------- 1059
M H + DE + + ++P VE ED +D+A+
Sbjct: 669 DAPMLKHLHRWLNMHPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKAQATGNDED 728
Query: 1060 -------------HYLESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLVSLY 1106
Y + YY +AH+I E V EQ + + G L+EYQ+ GL WLVSLY
Sbjct: 729 AKDLITKAKVEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLY 788
Query: 1107 NNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPRI 1166
NN LNGILADEMGLGKT+Q I+L+ YLM+ K GP+L++VP S LP W E WAP +
Sbjct: 789 NNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAV 848
Query: 1167 HKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRI 1226
+ Y G P+ RR L + ++ KFNVLLTTYEY++ D+ L+KIQW Y+IIDEGHR+
Sbjct: 849 GVVSYKGSPQGRR-LLQNQMRATKFNVLLTTYEYVIK--DKAVLAKIQWKYMIIDEGHRM 905
Query: 1227 KNASCKLNADLK-HYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKP 1285
KN CKL L HY + +RLLLTGTPLQN L ELWALLNFLLP+IF S F QWFN P
Sbjct: 906 KNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAP 965
Query: 1286 FESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA 1345
F + G+ + L+EEE +LII RLH+VLRPF+LRRLK +VE++LP+K+E +++C+ SA
Sbjct: 966 FATTGE----KVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSA 1021
Query: 1346 YQKLLMKRVEEN--LGSIGNSKGRS-------VHNSVMELRNICNHPYLSQLHAEEVDTL 1396
Q++L K ++ L + G+ KG+ + N++++LR +CNHP++ Q E+
Sbjct: 1022 LQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDH 1081
Query: 1397 IPKHYL---PPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRY 1453
H + P + R+ GK E+LDR+LPKLKAT+HRVL F MT+ + ++EDYL ++Q+ Y
Sbjct: 1082 TGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGY 1141
Query: 1454 LRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVD 1513
LRLDG T DRG L+ KFN + S F+FLLS RAGG+G+NLQ ADTV+IFD+DWNP D
Sbjct: 1142 LRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQD 1201
Query: 1514 LQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1573
LQAQ RAHRIGQ+ +V VLR TV +VEE++ A+A +KL + + I AG FD ++ +R
Sbjct: 1202 LQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1261
Query: 1574 REYLESLLRE 1583
+++L+++L +
Sbjct: 1262 QQFLQTILHQ 1271
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 588 bits (1517), Expect = e-167, Method: Compositional matrix adjust.
Identities = 343/816 (42%), Positives = 490/816 (60%), Gaps = 77/816 (9%)
Query: 831 MSTCFNKLKESVSSSEDISAKTKSVIELKKLQLLGLQRRLRNDFLN-------------- 876
++ C +KL + S + ++ + LQLL LQ+ +R L
Sbjct: 509 VNDCLDKLLNDECTE---STRENALYDYYALQLLPLQKAVRGHVLQFEWHQNSLLTNTHP 565
Query: 877 DFFKPI--TTDMDRLKS---YKKHRHGRRIKQLEKFEQKMKEERQKRIRERQKEFFSEIE 931
+F I D L + YK H +L K E+K K E R++ K S I
Sbjct: 566 NFLSKIRNINVQDALLTNQLYKNH-------ELLKLERK-KTEAVARLKSMNK---SAIN 614
Query: 932 AHKERLDEVFKIKRERWRGVNKYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLR 991
+ R D+ K +R + ++ + H ER +++ ++ +E++ LK ND E Y++
Sbjct: 615 QYNRRQDK----KNKRLKFGHRLIAT-HTNLERDEQKRAEKKAKERLQALKANDEEAYIK 669
Query: 992 MVQDAKSDRVNKLLKETEKYLQKLGSKLQEAKS-----MASHFENEMDETQTVSVVEKYE 1046
++ K R+ LL++T +L L +++ + + SH + +E +S+V K +
Sbjct: 670 LLDQTKDTRITHLLRQTNAFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSMVPKMK 729
Query: 1047 PAVENEDESDQAKHYLESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLVSLY 1106
+ + SN YY +AH IKE + +QP+ L GG L++YQ+ GL+W+VSL+
Sbjct: 730 -------DEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLF 782
Query: 1107 NNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPRI 1166
NN LNGILADEMGLGKT+Q I+L+ YL E KN RGP+LV+VP S L W SE WAP +
Sbjct: 783 NNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTL 842
Query: 1167 HKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRI 1226
I + G P ER+ + KI +F+V+LTT+EY++ +R LSK++W ++IIDEGHR+
Sbjct: 843 RTISFKGSPNERKAK-QAKIRAGEFDVVLTTFEYII--KERALLSKVKWVHMIIDEGHRM 899
Query: 1227 KNASCKLNADLK-HYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKP 1285
KNA KL+ L HY + +RL+LTGTPLQNNL ELWALLNF+LP IFNS + F +WFN P
Sbjct: 900 KNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTP 959
Query: 1286 FESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA 1345
F + G D+ LSEEE LL+I RLH+VLRPF+LRRLK VE ELP+K+E++V+C+ SA
Sbjct: 960 FANTG--GQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSA 1017
Query: 1346 YQKLLMKRVEEN----LGSIGNSKG---RSVHNSVMELRNICNHPYLSQLHAEEVDTLI- 1397
Q+++ +++ + +G N K R +N +M+L+ ICNHP++ EEV+ I
Sbjct: 1018 LQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFV----FEEVEDQIN 1073
Query: 1398 -PKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRL 1456
+ I R+ GK E+LDR+LPKLKAT HRVL F MT+++D+MED+L + +YLRL
Sbjct: 1074 PTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRL 1133
Query: 1457 DGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQA 1516
DGHT +R L+ FN DS + F+LS RAGG+G+NLQ ADTVIIFDTDWNP DLQA
Sbjct: 1134 DGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQA 1193
Query: 1517 QARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREY 1576
Q RAHRIGQK +V +LR T +VEE + A KL + + I AG FDN +++E++
Sbjct: 1194 QDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEAL 1253
Query: 1577 LESLL-----RECKKEEAA---PVLDDDALNDLLAR 1604
L SLL R K+E L D +N++LAR
Sbjct: 1254 LRSLLDAEEERRKKRESGVEEEEELKDSEINEILAR 1289
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 573 bits (1478), Expect = e-162, Method: Compositional matrix adjust.
Identities = 335/795 (42%), Positives = 492/795 (61%), Gaps = 63/795 (7%)
Query: 839 KESVSSSEDISAKTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMDRLKSYKKHRHG 898
K+ +SS D + K K+++ELK L+LL Q+ +R +N+ ++ L+
Sbjct: 227 KDDLSSRMD-TFKIKALVELKSLKLLTKQKSIRQKLINNVASQAHHNIPYLRDSPFTAAA 285
Query: 899 RR---------IKQLEKFEQKMKEERQKRIRERQKE-------FFSEIEAHKERLDEVFK 942
+R + Q + +++ ERQ+ + +R+KE S I+ KER E +
Sbjct: 286 QRSVQIRSKVIVPQTVRLAEEL--ERQQLLEKRKKERNLHLQKINSIIDFIKERQSEQWS 343
Query: 943 IKRERWRGVNKYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVN 1002
++ER + H + E+ +++I+R ++++ LK ND E YL+++ K R+
Sbjct: 344 -RQERCFQFGRLGASLHNQMEKDEQKRIERTAKQRLAALKSNDEEAYLKLLDQTKDTRIT 402
Query: 1003 KLLKETEKYLQKLGSKLQEAKSMASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYL 1062
+LL++T +L L ++ ++ A E + +P + E E
Sbjct: 403 QLLRQTNSFLDSLSEAVRAQQNEAKILHGE-----------EVQPITDEEREKTD----- 446
Query: 1063 ESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGK 1122
YY +AH IKE + +QP+ L GG L+EYQ+ GL W+VSLYNN LNGILADEMGLGK
Sbjct: 447 -----YYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGK 501
Query: 1123 TVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLF 1182
T+Q I+LI YL E K D GPFLV+VP S + W E WAP ++ I+Y G P +R L
Sbjct: 502 TIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSL- 560
Query: 1183 KEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHY-Q 1241
+ +I F+VLLTTYEY++ D+ LSK W ++IIDEGHR+KNA KL+ + HY +
Sbjct: 561 QHQIRVGNFDVLLTTYEYIIK--DKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYR 618
Query: 1242 SSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSE 1301
+ +RL+LTGTPLQNNL ELWALLNF+LP IFNS++ F WFN PF + G + ++ L+E
Sbjct: 619 TRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTG--TQEKLELTE 676
Query: 1302 EENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN---- 1357
EE LLII RLH+VLRPF+LRRLK +VE +LP+K+E++++C+ S Q+ L +++ ++
Sbjct: 677 EETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALF 736
Query: 1358 --LGSIGNSKG--RSVHNSVMELRNICNHPYLSQLHAEEVDTLI--PKHYLPPIVRLCGK 1411
G+ G +KG + ++N +M+LR ICNHP++ +EV+ ++ + + R+ GK
Sbjct: 737 VGAGTEGATKGGIKGLNNKIMQLRKICNHPFV----FDEVEGVVNPSRGNSDLLFRVAGK 792
Query: 1412 LEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDK 1471
E+LDR+LPK KA+ HRVL F MT+++D+MED+L K +Y+RLDG T +R +++
Sbjct: 793 FELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNA 852
Query: 1472 FNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLV 1531
FN DS +F FLLS RAGG+G+NLQ ADTVIIFDTDWNP DLQAQ RAHRIGQK +V +
Sbjct: 853 FNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 912
Query: 1532 LRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRE--CKKEEA 1589
LR T +VEE + A KL + + I AG FDN ++AE++ +L L+ + ++
Sbjct: 913 LRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDD 972
Query: 1590 APVLDDDALNDLLAR 1604
LDDD LND LAR
Sbjct: 973 KAELDDDELNDTLAR 987
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust.
Identities = 298/579 (51%), Positives = 393/579 (67%), Gaps = 30/579 (5%)
Query: 1046 EPAVENEDESDQAKHYLESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLVSL 1105
E A ++ D+ ++ ++ YY +AH+I E V +Q L G L+ YQ+ GL W+VSL
Sbjct: 684 ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL 743
Query: 1106 YNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPR 1165
YNN LNGILADEMGLGKT+Q IALI YLME K GP+L++VP S L W E + WAP
Sbjct: 744 YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS 803
Query: 1166 IHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHR 1225
+ KI Y G P RR L + + KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR
Sbjct: 804 VVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHR 860
Query: 1226 IKNASCKLNADLK-HYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNK 1284
+KN CKL L HY + R+LLTGTPLQN L ELWALLNFLLP IF S F QWFN
Sbjct: 861 MKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA 920
Query: 1285 PFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS 1344
PF G+ L+EEE +LII RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ S
Sbjct: 921 PFAMTGER----VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMS 976
Query: 1345 AYQKLLMKRVEEN--LGSIGN-------SKGRSVHNSVMELRNICNHPYLSQLHAEEVDT 1395
A QK+L + ++ L + G+ +++ N++M+LR ICNHPY+ Q H EE
Sbjct: 977 ALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEES-- 1033
Query: 1396 LIPKH--YLPPIV------RLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLT 1447
+H Y ++ R GK E+LDR+LPKL+AT+HRVL F MT L+ +MEDY
Sbjct: 1034 -FAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFA 1092
Query: 1448 FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTD 1507
F+ + YLRLDG T DR AL+ KFN+ S +FIFLLS RAGG+G+NLQAADTV+IFD+D
Sbjct: 1093 FRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSD 1152
Query: 1508 WNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNN 1567
WNP DLQAQ RAHRIGQ+ +V VLR TV +VEE++ A+A++KL V + I AG FD
Sbjct: 1153 WNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1212
Query: 1568 TSAEDRREYLESLL-RECKKEEAAPVLDDDALNDLLARR 1605
+S+ +RR +L+++L E + EE V DD+ LN ++ARR
Sbjct: 1213 SSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARR 1251
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 840 ESVSSSEDISAKTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKKHRHG 898
ES+ S +TK+ +ELK L+LL QR+LR + + + T + K+YK+ +
Sbjct: 367 ESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ 426
Query: 899 --RRIKQLEKFEQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVK 956
R + EK E++ K E++++ R++ +E+ + I H + E + + + ++K V
Sbjct: 427 TLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA 486
Query: 957 EFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKLG 1016
+H ER +++ +RI++E++ L D EGY +++ K R+ LL++T++Y+ L
Sbjct: 487 TWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT 546
Query: 1017 SKLQEAK 1023
+ + E K
Sbjct: 547 NLVWEHK 553
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 570 bits (1468), Expect = e-161, Method: Compositional matrix adjust.
Identities = 298/579 (51%), Positives = 393/579 (67%), Gaps = 30/579 (5%)
Query: 1046 EPAVENEDESDQAKHYLESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLVSL 1105
E A ++ D+ ++ ++ YY +AH+I E V +Q L G L+ YQ+ GL W+VSL
Sbjct: 679 ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL 738
Query: 1106 YNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPR 1165
YNN LNGILADEMGLGKT+Q IALI YLME K GP+L++VP S L W E + WAP
Sbjct: 739 YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS 798
Query: 1166 IHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHR 1225
+ KI Y G P RR L + + KFNVLLTTYEY++ D+ L+KI+W Y+I+DEGHR
Sbjct: 799 VVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIK--DKHILAKIRWKYMIVDEGHR 855
Query: 1226 IKNASCKLNADLK-HYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNK 1284
+KN CKL L HY + R+LLTGTPLQN L ELWALLNFLLP IF S F QWFN
Sbjct: 856 MKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA 915
Query: 1285 PFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS 1344
PF G+ L+EEE +LII RLH+VLRPF+LRRLK +VE++LPEK+E +++C+ S
Sbjct: 916 PFAMTGER----VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMS 971
Query: 1345 AYQKLLMKRVEEN--LGSIGN-------SKGRSVHNSVMELRNICNHPYLSQLHAEEVDT 1395
A QK+L + ++ L + G+ +++ N++M+LR ICNHPY+ Q H EE
Sbjct: 972 ALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQ-HIEES-- 1028
Query: 1396 LIPKH--YLPPIV------RLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLT 1447
+H Y ++ R GK E+LDR+LPKL+AT+HRVL F MT L+ +MEDY
Sbjct: 1029 -FAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFA 1087
Query: 1448 FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTD 1507
F+ + YLRLDG T DR AL+ KFN+ S +FIFLLS RAGG+G+NLQAADTV+IFD+D
Sbjct: 1088 FRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSD 1147
Query: 1508 WNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNN 1567
WNP DLQAQ RAHRIGQ+ +V VLR TV +VEE++ A+A++KL V + I AG FD
Sbjct: 1148 WNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1207
Query: 1568 TSAEDRREYLESLL-RECKKEEAAPVLDDDALNDLLARR 1605
+S+ +RR +L+++L E + EE V DD+ LN ++ARR
Sbjct: 1208 SSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARR 1246
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 840 ESVSSSEDISAKTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKKHRHG 898
E++ S +TK+ +ELK L+LL QR+LR + + + T + K+YK+ +
Sbjct: 362 ENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ 421
Query: 899 --RRIKQLEKFEQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVK 956
R + EK E++ K E++++ R++ +E+ + I H + E + + + ++K V
Sbjct: 422 TLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA 481
Query: 957 EFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKLG 1016
+H ER +++ +RI++E++ L D EGY +++ K R+ LL++T++Y+ L
Sbjct: 482 TWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT 541
Query: 1017 SKLQEAK 1023
+ + E K
Sbjct: 542 NLVWEHK 548
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/589 (49%), Positives = 394/589 (66%), Gaps = 31/589 (5%)
Query: 1019 LQEAKSMASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYLESNEKYYLMAHSIKES 1078
++E K + +++ E ++E + V++E QA + YY +AH++ E
Sbjct: 684 VEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA--LARGLQSYYAVAHAVTER 741
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
V +Q + G L++YQ+ GL WLVSLYNN LNGILADEMGLGKT+Q IALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTY 1198
GPFL++VP S L W E + WAP + K+ Y G P RR F ++ KFNVLLTTY
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR-AFVPQLRSGKFNVLLTTY 860
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLLTGTPLQNNL 1257
EY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLLTGTPLQN L
Sbjct: 861 EYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
Query: 1258 EELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRP 1317
ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII RLH+VLRP
Sbjct: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILIIRRLHKVLRP 974
Query: 1318 FVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN-------SKGRS 1368
F+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+ ++
Sbjct: 975 FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT 1034
Query: 1369 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLP 1420
+ N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 1421 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 1480
KL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 1481 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 1540
IFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +V
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Query: 1541 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEA 1589
EE++ A+A++KL V + I AG FD +S+ +RR +L+++L +++E+
Sbjct: 1211 EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDES 1259
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 851 KTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKKHRHG--RRIKQLEKF 907
+TK+ IELK L+LL QR+LR + + + + K+YK+ + R + EK
Sbjct: 397 RTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKL 456
Query: 908 EQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVKEFHKRKERIHR 967
E++ K E++++ R++ +E+ + I H + E + + + + K V +H ER +
Sbjct: 457 EKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQK 516
Query: 968 EKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKL 1015
++ +RI++E++ L D EGY +++ K R+ LL++T++Y+ L
Sbjct: 517 KENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANL 564
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/581 (49%), Positives = 389/581 (66%), Gaps = 31/581 (5%)
Query: 1019 LQEAKSMASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYLESNEKYYLMAHSIKES 1078
++E K + +++ E ++E + V++E QA + YY +AH++ E
Sbjct: 676 VEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA--LARGLQSYYAVAHAVTER 733
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
V +Q + G L++YQ+ GL WLVSLYNN LNGILADEMGLGKT+Q IALI YLME K
Sbjct: 734 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 793
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTY 1198
GPFL++VP S L W E + WAP + K+ Y G P RR F ++ KFNVLLTTY
Sbjct: 794 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR-AFVPQLRSGKFNVLLTTY 852
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLLTGTPLQNNL 1257
EY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLLTGTPLQN L
Sbjct: 853 EYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 910
Query: 1258 EELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRP 1317
ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII RLH+VLRP
Sbjct: 911 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILIIRRLHKVLRP 966
Query: 1318 FVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN-------SKGRS 1368
F+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+ ++
Sbjct: 967 FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT 1026
Query: 1369 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLP 1420
+ N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LP
Sbjct: 1027 LMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1082
Query: 1421 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 1480
KL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +F
Sbjct: 1083 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1142
Query: 1481 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 1540
IFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +V
Sbjct: 1143 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1202
Query: 1541 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL 1581
EE++ A+A++KL V + I AG FD +S+ +RR +L+++L
Sbjct: 1203 EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1243
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 851 KTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKKHRHG--RRIKQLEKF 907
+TK+ IELK L+LL QR+LR + + + + K+YK+ + R + EK
Sbjct: 389 RTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKL 448
Query: 908 EQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVKEFHKRKERIHR 967
E++ K E++++ R++ +E+ + I H + E + + + + K V +H ER +
Sbjct: 449 EKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQK 508
Query: 968 EKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKL 1015
++ +RI++E++ L D EGY +++ K R+ LL++T++Y+ L
Sbjct: 509 KENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANL 556
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/581 (49%), Positives = 389/581 (66%), Gaps = 31/581 (5%)
Query: 1019 LQEAKSMASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYLESNEKYYLMAHSIKES 1078
++E K + +++ E ++E + V++E QA + YY +AH++ E
Sbjct: 684 VEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA--LARGLQSYYAVAHAVTER 741
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
V +Q + G L++YQ+ GL WLVSLYNN LNGILADEMGLGKT+Q IALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTY 1198
GPFL++VP S L W E + WAP + K+ Y G P RR F ++ KFNVLLTTY
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR-AFVPQLRSGKFNVLLTTY 860
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLLTGTPLQNNL 1257
EY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLLTGTPLQN L
Sbjct: 861 EYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
Query: 1258 EELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRP 1317
ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII RLH+VLRP
Sbjct: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILIIRRLHKVLRP 974
Query: 1318 FVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN-------SKGRS 1368
F+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+ ++
Sbjct: 975 FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT 1034
Query: 1369 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLP 1420
+ N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 1421 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 1480
KL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 1481 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 1540
IFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +V
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Query: 1541 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL 1581
EE++ A+A++KL V + I AG FD +S+ +RR +L+++L
Sbjct: 1211 EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1251
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 851 KTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKKHRHG--RRIKQLEKF 907
+TK+ IELK L+LL QR+LR + + + + K+YK+ + R + EK
Sbjct: 397 RTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKL 456
Query: 908 EQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVKEFHKRKERIHR 967
E++ K E++++ R++ +E+ + I H + E + + + + K V +H ER +
Sbjct: 457 EKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQK 516
Query: 968 EKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKL 1015
++ +RI++E++ L D EGY +++ K R+ LL++T++Y+ L
Sbjct: 517 KENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANL 564
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/581 (49%), Positives = 389/581 (66%), Gaps = 31/581 (5%)
Query: 1019 LQEAKSMASHFENEMDETQTVSVVEKYEPAVENEDESDQAKHYLESNEKYYLMAHSIKES 1078
++E K + +++ E ++E + V++E QA + YY +AH++ E
Sbjct: 684 VEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA--LARGLQSYYAVAHAVTER 741
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
V +Q + G L++YQ+ GL WLVSLYNN LNGILADEMGLGKT+Q IALI YLME K
Sbjct: 742 VDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR 801
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTY 1198
GPFL++VP S L W E + WAP + K+ Y G P RR F ++ KFNVLLTTY
Sbjct: 802 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR-AFVPQLRSGKFNVLLTTY 860
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYQSSHRLLLTGTPLQNNL 1257
EY++ D+ L+KI+W Y+I+DEGHR+KN CKL L HY + RLLLTGTPLQN L
Sbjct: 861 EYIIK--DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKL 918
Query: 1258 EELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRP 1317
ELWALLNFLLP IF S F QWFN PF G+ + L+EEE +LII RLH+VLRP
Sbjct: 919 PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE----KVDLNEEETILIIRRLHKVLRP 974
Query: 1318 FVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEEN--LGSIGN-------SKGRS 1368
F+LRRLK +VE +LPEK+E +++C+ SA Q++L + ++ L + G+ ++
Sbjct: 975 FLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKT 1034
Query: 1369 VHNSVMELRNICNHPYLSQLHAEEVDTLIPKH--YLPPIV------RLCGKLEMLDRLLP 1420
+ N++M+LR ICNHPY+ Q H EE +H + IV R GK E+LDR+LP
Sbjct: 1035 LMNTIMQLRKICNHPYMFQ-HIEES---FSEHLGFTGGIVQGLDLYRASGKFELLDRILP 1090
Query: 1421 KLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFF 1480
KL+AT+H+VL F MT L+ +MEDY ++ ++YLRLDG T DRG L+ FN+ S +F
Sbjct: 1091 KLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYF 1150
Query: 1481 IFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTV 1540
IFLLS RAGG+G+NLQ+ADTVIIFD+DWNP DLQAQ RAHRIGQ+ +V VLR TV +V
Sbjct: 1151 IFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV 1210
Query: 1541 EEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLL 1581
EE++ A+A++KL V + I AG FD +S+ +RR +L+++L
Sbjct: 1211 EEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1251
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 851 KTKSVIELKKLQLLGLQRRLRNDFLNDFFKPITTDMD-RLKSYKKHRHG--RRIKQLEKF 907
+TK+ IELK L+LL QR+LR + + + + K+YK+ + R + EK
Sbjct: 397 RTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKL 456
Query: 908 EQKMKEERQKRIRERQKEFFSEIEAHKERLDEVFKIKRERWRGVNKYVKEFHKRKERIHR 967
E++ K E++++ R++ +E+ + I H + E + + + + K V +H ER +
Sbjct: 457 EKQQKIEQERKRRQKHQEYLNSILQHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQK 516
Query: 968 EKIDRIQREKINLLKINDVEGYLRMVQDAKSDRVNKLLKETEKYLQKL 1015
++ +RI++E++ L D EGY +++ K R+ LL++T++Y+ L
Sbjct: 517 KENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANL 564
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 322/809 (39%), Positives = 464/809 (57%), Gaps = 106/809 (13%)
Query: 856 IELKKLQLLGLQRRLRNDFLNDFFKPITTDMDRLKSYKKHRHGRRIKQLEKFEQKMKEER 915
IE KKL+L LQ R+R + ++ + I + DR Y+K ++LE Q +
Sbjct: 731 IEEKKLRLSDLQSRVREE-VDRQQQEIMSMPDR--PYRKFVRLCERQRLEMNRQVLAN-- 785
Query: 916 QKRIRERQ-KEFFSEIEAHKERLDEVFKIKRERW---RGVNKY----VKEFHKRKERIHR 967
QK +RE+Q K F + K+ L+ + I+ R RGV KY ++EF KRK
Sbjct: 786 QKAVREKQLKTIF---QWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRK----- 837
Query: 968 EKIDRIQREKINLLKINDVEGYLRMVQDAKSDR----------VNKLLKETEKYLQKLGS 1017
D + +++ LK NDVE Y M+ + +++ ++ L +TE YL KLG
Sbjct: 838 ---DDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTEDYLHKLGG 894
Query: 1018 KLQEAKSMASHFENEM-------------DETQTVSVVEKYEPAVENEDESDQAKHYLES 1064
K+ K+ E +E + + + E + N A S
Sbjct: 895 KITATKNQQEVEEAANAAAVAARLQGLSEEEVRAAATCAREEVVIRNRFTEMNAPKENSS 954
Query: 1065 NEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTV 1124
KYY +AH++ E V QP+ LQ G LR+YQ+ GL+W++SLYNN+LNGILADEMGLGKTV
Sbjct: 955 VNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTV 1014
Query: 1125 QVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKE 1184
QV+ALI YLME K + GP L++VP++VL W+SE++ W P + I Y G ++R +LF +
Sbjct: 1015 QVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQ 1074
Query: 1185 KIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 1244
++ KFNVL+TTYE++M +DR KLSK+ W YIIIDE R+K+ L DL Y+
Sbjct: 1075 EVCAMKFNVLVTTYEFIM--YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQR 1132
Query: 1245 RLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGD-NSPDEALLSEEE 1303
RLLLTGTPLQN+L+ELW+LLN LLP++F++ + F WF +PF+ G ++ ++ L E+
Sbjct: 1133 RLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEK 1192
Query: 1304 NLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMK--------RVE 1355
+++I+RLHQ+L PF+LRR VE LP K+ ++RC SA Q + RV+
Sbjct: 1193 KVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVD 1252
Query: 1356 ENLGSIGNSKG--------RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVR 1407
+ + K R+++N MELR CNHP L+ + + K +L VR
Sbjct: 1253 PDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFS----KDFL---VR 1305
Query: 1408 LCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGA 1467
CGKL +LDR+L KL+ T HRVL FSTMT+LLD++E+YL +++ Y R+DG TS DR +
Sbjct: 1306 SCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRES 1365
Query: 1468 LIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKR 1527
I FN D+ FIFLLSIRA G G+NLQ ADTV+I+D D NP+ + QA ARAHRIGQ R
Sbjct: 1366 AIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTR 1425
Query: 1528 DVLVLRFETV------QTVEEQVRASA---------------------------EHKLGV 1554
+V V+ E V E+++R+ ++K+ +
Sbjct: 1426 EVKVIYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDM 1485
Query: 1555 ANQSITAGFFDNNTSAEDRREYLESLLRE 1583
A++ I AG FD T+ E+RR LE+LL +
Sbjct: 1486 ADEVINAGRFDQRTTHEERRMTLETLLHD 1514
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1 SV=1
Length = 1120
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/536 (43%), Positives = 331/536 (61%), Gaps = 29/536 (5%)
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
VSE P+ ++ GKLR+YQ+ GL WL+SL+ N+L+GILADEMGLGKT+Q I+ + YL K
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTY 1198
GPFL++VP S L W E W P ++ +V G + R + + I+ +F+VL+T+Y
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSY 291
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLE 1258
E ++ ++ L ++ W YI+IDE HRIKN L+ ++ + S +RLL+TGTPLQNNL
Sbjct: 292 EMVI--REKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLH 349
Query: 1259 ELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPF 1318
ELWALLNFLLP+IF SE F +WF E N SE++ ++I +LH VL PF
Sbjct: 350 ELWALLNFLLPDIFGDSELFDEWF----EQNN---------SEQDQEIVIQQLHSVLNPF 396
Query: 1319 VLRRLKHKVENELPEKIER-----LVRCEASAYQKLLMKRVEENLGSIGNSKGRS-VHNS 1372
+LRR+K VE L KIE + + Y+ LL K ++ G++G +G++ + N
Sbjct: 397 LLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNI 456
Query: 1373 VMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFF 1432
VM+LR CNHPYL E + P ++ GK+ +LD+LL +LK RVL F
Sbjct: 457 VMQLRKCCNHPYL----FEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIF 512
Query: 1433 STMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVG 1492
S M+RLLD++EDY F+ + Y R+DG TS +R ID++N+ +S F+FLL+ RAGG+G
Sbjct: 513 SQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLG 572
Query: 1493 VNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKL 1552
+NL ADTVI+FD+DWNPQ DLQA RAHRIGQK+ V V RF T +EE+V A KL
Sbjct: 573 INLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKL 632
Query: 1553 GVANQSITAGFFDNNTSAEDRREYLESLLRECKK----EEAAPVLDDDALNDLLAR 1604
+ I G S + ++ L +++ K ++A+ V D ++D+L +
Sbjct: 633 RLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMFEKKASKVTVDADIDDILKK 688
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/485 (47%), Positives = 317/485 (65%), Gaps = 27/485 (5%)
Query: 1082 QPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRG 1141
QP+C+QG K+R+YQ++GL WL+ LY N +NGILADEMGLGKT+Q I+L+ YL E + G
Sbjct: 181 QPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING 239
Query: 1142 PFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYL 1201
P +VV P S L W +EI + P + + + G PEERR + ++ +V KF++ +T++E
Sbjct: 240 PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFE-- 297
Query: 1202 MNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELW 1261
M ++ L + W YIIIDE HRIKN + L+ ++ + +++RLL+TGTPLQNNL ELW
Sbjct: 298 MAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELW 357
Query: 1262 ALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLR 1321
ALLNFLLP IF+S+E F +WF + +G+N E ++ +LH+VLRPF+LR
Sbjct: 358 ALLNFLLPEIFSSAETFDEWF----QISGENDQQE----------VVQQLHKVLRPFLLR 403
Query: 1322 RLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNSKGRSVHNSVMELR 1377
RLK VE LP K E +++ S Y K L+++ E + + G K + N M+LR
Sbjct: 404 RLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERK--RLLNIAMQLR 461
Query: 1378 NICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTR 1437
CNHPYL Q AE +L + GK+ +LD+LLPKLK D RVL FS MTR
Sbjct: 462 KCCNHPYLFQ-GAEPGPPYTTGDHL---ITNAGKMVLLDKLLPKLKERDSRVLIFSQMTR 517
Query: 1438 LLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQA 1497
LLD++EDYL ++ Y Y R+DG+T G +R A I+ +N+ S F+FLLS RAGG+G+NL
Sbjct: 518 LLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLAT 577
Query: 1498 ADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQ 1557
AD VI++D+DWNPQVDLQAQ RAHRIGQK++V V RF T +EE+V A KL +
Sbjct: 578 ADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDAL 637
Query: 1558 SITAG 1562
I G
Sbjct: 638 VIQQG 642
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/511 (43%), Positives = 314/511 (61%), Gaps = 38/511 (7%)
Query: 1083 PTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGP 1142
P ++ G++R+YQ+ GL W++SLY N +NGILADEMGLGKT+Q I+L+ YL KN GP
Sbjct: 120 PAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGP 179
Query: 1143 FLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLM 1202
+V+VP S L W +E W P + + G + R ++ ++ +++V +T+YE M
Sbjct: 180 HIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYE--M 237
Query: 1203 NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWA 1262
++ K W Y++IDE HRIKN KL+ L+ +++++RLL+TGTPLQNNL ELWA
Sbjct: 238 CIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWA 297
Query: 1263 LLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRR 1322
LLNFLLP++FNSSEDF +WFN GD++ +I RLH VL+PF+LRR
Sbjct: 298 LLNFLLPDVFNSSEDFDEWFNTN-TCLGDDA-------------LITRLHAVLKPFLLRR 343
Query: 1323 LKHKVENELPEKIER-----LVRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVMELR 1377
LK +VE L K E L + + Y K+L+K ++ G+ G + + N +M+LR
Sbjct: 344 LKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGA-GKVEKMRLQNILMQLR 402
Query: 1378 NICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEMLDRLLPKLKATDHRVLF 1431
NHPYL D P PP +V GK+ +LD+LLPKL+ RVL
Sbjct: 403 KCTNHPYL-------FDGAEPG---PPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLI 452
Query: 1432 FSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGV 1491
FS MTR+LD++EDY ++ Y Y RLDG T DR I +FN +S F+F+LS RAGG+
Sbjct: 453 FSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGL 512
Query: 1492 GVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHK 1551
G+NL AD VII+D+DWNPQ+DLQA RAHRIGQK+ V V R T TVEE++ AE K
Sbjct: 513 GINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVK 572
Query: 1552 LGVANQSITAGFFDNNTSAEDRREYLESLLR 1582
L + I G +N S + ++ + +++R
Sbjct: 573 LRLDKMVIQGGRLVDNRSNQLNKDEMLNIIR 603
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5
PE=1 SV=1
Length = 1052
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/609 (40%), Positives = 349/609 (57%), Gaps = 51/609 (8%)
Query: 989 YLRMVQDAKSDRVNKLLKETEKYLQKLGSKLQEA-----KSMASHFENEMDETQTVSVVE 1043
Y +Q +++R LLK+TE + + Q+ K + DE Q + V
Sbjct: 80 YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVG 139
Query: 1044 KYEPAVENEDESDQAKHYLESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLV 1103
Y E ++ + L + K A ++ + P+ ++ GKLR+YQ+ GL WL+
Sbjct: 140 DYR---HRRTEQEEDEELLTESSK----ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLI 192
Query: 1104 SLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWA 1163
SLY N +NGILADEMGLGKT+Q I+L+ Y+ +N GP +V+VP S L W SE W
Sbjct: 193 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWV 252
Query: 1164 PRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEG 1223
P + + G E+R ++ ++ +++V +T+YE L+ ++ K W Y++IDE
Sbjct: 253 PTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEA 310
Query: 1224 HRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFN 1283
HRIKN KL+ ++ +++++RLLLTGTPLQNNL ELW+LLNFLLP++FNS++DF WF+
Sbjct: 311 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 370
Query: 1284 KPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----L 1338
GD ++ RLH VLRPF+LRR+K VE LP K E L
Sbjct: 371 TN-NCLGDQK-------------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGL 416
Query: 1339 VRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIP 1398
+ + Y ++LMK ++ L S G + N +M+LR CNHPYL D P
Sbjct: 417 SKMQREWYTRILMKDID-ILNSAGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEP 468
Query: 1399 KHYLPP------IVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYR 1452
PP +V GK+ +LD+LLPKLK RVL FS MTR+LD++EDY ++ Y
Sbjct: 469 G---PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYE 525
Query: 1453 YLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV 1512
Y RLDG T +R I+ +N+ +S F+F+LS RAGG+G+NL AD VI++D+DWNPQV
Sbjct: 526 YCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQV 585
Query: 1513 DLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAE 1571
DLQA RAHRIGQ + V V RF T TVEE++ AE KL + + I G D N +
Sbjct: 586 DLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKI 645
Query: 1572 DRREYLESL 1580
+ E L+ +
Sbjct: 646 GKDEMLQMI 654
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5
PE=1 SV=1
Length = 1051
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/609 (40%), Positives = 349/609 (57%), Gaps = 51/609 (8%)
Query: 989 YLRMVQDAKSDRVNKLLKETEKYLQKLGSKLQEA-----KSMASHFENEMDETQTVSVVE 1043
Y +Q +++R LLK+TE + + Q+ K + DE Q + V
Sbjct: 79 YEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVG 138
Query: 1044 KYEPAVENEDESDQAKHYLESNEKYYLMAHSIKESVSEQPTCLQGGKLREYQMSGLRWLV 1103
Y E ++ + L + K A ++ + P+ ++ GKLR+YQ+ GL WL+
Sbjct: 139 DYR---HRRTEQEEDEELLTESSK----ATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLI 191
Query: 1104 SLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWA 1163
SLY N +NGILADEMGLGKT+Q I+L+ Y+ +N GP +V+VP S L W SE W
Sbjct: 192 SLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWV 251
Query: 1164 PRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEG 1223
P + + G E+R ++ ++ +++V +T+YE L+ ++ K W Y++IDE
Sbjct: 252 PTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIK--EKSVFKKFNWRYLVIDEA 309
Query: 1224 HRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFN 1283
HRIKN KL+ ++ +++++RLLLTGTPLQNNL ELW+LLNFLLP++FNS++DF WF+
Sbjct: 310 HRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD 369
Query: 1284 KPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER-----L 1338
GD ++ RLH VLRPF+LRR+K VE LP K E L
Sbjct: 370 TN-NCLGDQK-------------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGL 415
Query: 1339 VRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIP 1398
+ + Y ++LMK ++ L S G + N +M+LR CNHPYL D P
Sbjct: 416 SKMQREWYTRILMKDID-ILNSAGKMDKMRLLNILMQLRKCCNHPYL-------FDGAEP 467
Query: 1399 KHYLPP------IVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYR 1452
PP +V GK+ +LD+LLPKLK RVL FS MTR+LD++EDY ++ Y
Sbjct: 468 G---PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYE 524
Query: 1453 YLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQV 1512
Y RLDG T +R I+ +N+ +S F+F+LS RAGG+G+NL AD VI++D+DWNPQV
Sbjct: 525 YCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQV 584
Query: 1513 DLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG-FFDNNTSAE 1571
DLQA RAHRIGQ + V V RF T TVEE++ AE KL + + I G D N +
Sbjct: 585 DLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKI 644
Query: 1572 DRREYLESL 1580
+ E L+ +
Sbjct: 645 GKDEMLQMI 653
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/540 (43%), Positives = 324/540 (60%), Gaps = 49/540 (9%)
Query: 1083 PTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGP 1142
P+ ++GG LR+YQ+ GL WL+SLY N +NGILADEMGLGKT+Q IAL+ YL +N GP
Sbjct: 179 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 238
Query: 1143 FLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLM 1202
+V+VP S L W +E W P + I + G + R +++++ +++V +T+YE ++
Sbjct: 239 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVI 298
Query: 1203 NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWA 1262
++ K W Y++IDE HRIKN KL+ ++ ++S++RLLLTGTPLQNNL ELWA
Sbjct: 299 K--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 356
Query: 1263 LLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRR 1322
LLNFLLP++FNS++DF WF+ GD ++ RLH VL+PF+LRR
Sbjct: 357 LLNFLLPDVFNSADDFDSWFDTK-NCLGDQK-------------LVERLHAVLKPFLLRR 402
Query: 1323 LKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVMELR 1377
+K VE LP K E L + + Y K+LMK ++ L S G + N +M+LR
Sbjct: 403 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-VLNSSGKMDKMRLLNILMQLR 461
Query: 1378 NICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEMLDRLLPKLKATDHRVLF 1431
CNHPYL D P PP IV GK+ LD+LL ++K RVL
Sbjct: 462 KCCNHPYL-------FDGAEPG---PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLI 511
Query: 1432 FSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGV 1491
FS MTRLLD++EDY ++ Y Y RLDG T +R ID FN +S FIF+LS RAGG+
Sbjct: 512 FSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGL 571
Query: 1492 GVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHK 1551
G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R T TVEE++ AE K
Sbjct: 572 GINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK 631
Query: 1552 LGVANQSITAGFFDNNTSAEDRREYLESLLRE-------CKKEEAAPVLDDDALNDLLAR 1604
L + + I G + S + +E + ++R CK+ E L D+ + +L R
Sbjct: 632 LRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFACKESE----LTDEDIVTILER 687
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/483 (46%), Positives = 312/483 (64%), Gaps = 23/483 (4%)
Query: 1082 QPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRG 1141
QP+C++G K+R+YQ++GL WL+ LY N +NGILADEMGLGKT+Q I+L+ YL E + G
Sbjct: 223 QPSCIKG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITG 281
Query: 1142 PFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYL 1201
P +VV P S L W EI + P + + + G PEER + + + KF+V +T++E
Sbjct: 282 PHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFE-- 339
Query: 1202 MNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELW 1261
M ++ L + W YIIIDE HRIKN + L+ ++ Y +++RLL+TGTPLQNNL ELW
Sbjct: 340 MAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELW 399
Query: 1262 ALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLR 1321
+LLNFLLP IF+S+E F +WF + +G+N E ++ +LH+VLRPF+LR
Sbjct: 400 SLLNFLLPEIFSSAETFDEWF----QISGENDQQE----------VVQQLHKVLRPFLLR 445
Query: 1322 RLKHKVENELPEKIERLVRCEASAYQKLLMKRVEENLGSIGNSKG--RSVHNSVMELRNI 1379
RLK VE LP K E +++ S QK + + + + N+ G + + N M+LR
Sbjct: 446 RLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKC 505
Query: 1380 CNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLL 1439
CNHPYL Q +H +V GK+ +LD+LLPKLK D RVL FS MTRLL
Sbjct: 506 CNHPYLFQGAEPGPPYTTGEH----LVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLL 561
Query: 1440 DVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAAD 1499
D++EDYL ++ Y+Y R+DG+T G DR A I+ FN+ S F+FLLS RAGG+G+NL AD
Sbjct: 562 DILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATAD 621
Query: 1500 TVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSI 1559
V+++D+DWNPQ DLQAQ RAHRIGQK++V V RF T T+EE+V A KL + I
Sbjct: 622 VVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI 681
Query: 1560 TAG 1562
G
Sbjct: 682 QQG 684
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/526 (43%), Positives = 311/526 (59%), Gaps = 32/526 (6%)
Query: 1047 PAVENEDESDQAKHYLESNEKYYLMAHSIKES----VSEQPTCLQGGKLREYQMSGLRWL 1102
P+ +N + D E E ++A +IK + P ++ G++R+YQ+ GL WL
Sbjct: 84 PSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIFDKSPFYIENGEMRDYQVRGLNWL 143
Query: 1103 VSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFW 1162
SL +N++NGILADEMGLGKT+Q I++I Y+ KN P LV+VP S L W +E W
Sbjct: 144 ASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKW 203
Query: 1163 APRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDE 1222
P I+ +V G R ++ ++ I+ QKF+V TTYE ++ + +L K+ W YIIIDE
Sbjct: 204 CPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKV--KTQLKKLNWRYIIIDE 261
Query: 1223 GHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 1282
HRIKN KL+ ++ S +RLL+TGTPLQNNL ELWALLNFLLP+IF SS+DF WF
Sbjct: 262 AHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWF 321
Query: 1283 -NKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIER---- 1337
N N D ++ RLH+VL+PF+LRR+K VE L K E
Sbjct: 322 SNDAMSGNTD---------------LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYV 366
Query: 1338 -LVRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTL 1396
L + + Y K+LMK ++ G+ K R + N +M LR NHPYL AE
Sbjct: 367 GLSKMQREWYTKVLMKDIDIINGAGKVEKAR-LMNILMHLRKCVNHPYLFD-GAEPGPPF 424
Query: 1397 IPKHYLPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRL 1456
+L V GK+ +LD+LL K K RVL FS +R+LD++ED+ ++ Y Y RL
Sbjct: 425 TTDQHL---VDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRL 481
Query: 1457 DGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQA 1516
DG T DR I+ +N DS FIF+L+ RAGG+G+NL AD VII+D+DWNPQ DLQA
Sbjct: 482 DGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQA 541
Query: 1517 QARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAG 1562
RAHRIGQK+ V V R T TV+E++ AE KL + N I G
Sbjct: 542 MDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQG 587
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/524 (44%), Positives = 315/524 (60%), Gaps = 52/524 (9%)
Query: 1083 PTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGP 1142
P+ ++GG LR+YQ+ GL WL+SLY N +NGILADEMGLGKT+Q IAL+ YL +N GP
Sbjct: 175 PSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP 234
Query: 1143 FLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLM 1202
+V+VP S L W +E W P + I + G + R +++++ +++V +T+YE ++
Sbjct: 235 HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVI 294
Query: 1203 NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWA 1262
++ K W Y++IDE HRIKN KL+ ++ ++S++RLLLTGTPLQNNL ELWA
Sbjct: 295 K--EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA 352
Query: 1263 LLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRR 1322
LLNFLLP++FNS++DF WF+ GD ++ RLH VL+PF+LRR
Sbjct: 353 LLNFLLPDVFNSADDFDSWFDTK-NCLGDQK-------------LVERLHAVLKPFLLRR 398
Query: 1323 LKHKVENELPEKIE-----RLVRCEASAYQKLLMKRVEENLGSIGNSKGRSVHNSVMELR 1377
+K VE LP K E L + + Y K+LMK + + L S G + N +M+LR
Sbjct: 399 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDI-DVLNSSGKMDKMRLLNILMQLR 457
Query: 1378 NICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEMLDRLLPKLKATDHRVLF 1431
CNHPYL D P PP IV GK+ +LD+LL KLK RVL
Sbjct: 458 KCCNHPYL-------FDGAEPG---PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLI 507
Query: 1432 FSTMTRLLDVMEDYLTFKQYRYLRLDGHTSG-------------GDRGALIDKFNQQDSP 1478
FS MTRLLD++EDY ++ Y Y RLDG T G R A I+ FN +S
Sbjct: 508 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREA-IEAFNAPNSS 566
Query: 1479 FFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQ 1538
FIF+LS RAGG+G+NL +AD VI++D+DWNPQVDLQA RAHRIGQK+ V V R T
Sbjct: 567 KFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDN 626
Query: 1539 TVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR 1582
TVEE++ AE KL + + I G + S + +E + ++R
Sbjct: 627 TVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIR 670
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/498 (42%), Positives = 307/498 (61%), Gaps = 33/498 (6%)
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
+ +QP+ ++GG++R++Q++G+ W+ L++ NGILADEMGLGKTVQ + + YL+ +
Sbjct: 378 LEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLK 437
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIV------HQKFN 1192
GPFL+VVP S +P W+ + W P ++ I Y G E R + + + KFN
Sbjct: 438 QHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFN 497
Query: 1193 VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTP 1252
+LLTTYEY++ D+ +L+ I+W Y+ IDE HR+KN+ L L +++++RLL+TGTP
Sbjct: 498 ILLTTYEYILK--DKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTP 555
Query: 1253 LQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLH 1312
LQNNL+EL +L+NFL+P F ++ + F++P N + D I L
Sbjct: 556 LQNNLKELASLVNFLMPGKFYIRDELN--FDQP---NAEQERD------------IRDLQ 598
Query: 1313 QVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSKGR--- 1367
+ L+PF+LRRLK VE LP K ER++R E S Q K + +N ++ G++ GR
Sbjct: 599 ERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQL 658
Query: 1368 SVHNSVMELRNICNHPYLSQLHAEEV---DTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 1424
S+ N V+EL+ + NHPYL AE+ + + L I+ GK+ +LD+LL +LK
Sbjct: 659 SLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKH 718
Query: 1425 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 1484
HRVL FS M R+L+++ +Y++ + Y Y RLDG R ID FN DSP F+FLL
Sbjct: 719 DGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLL 778
Query: 1485 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 1544
S RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V V RF + TVEE +
Sbjct: 779 STRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDI 838
Query: 1545 RASAEHKLGVANQSITAG 1562
A K+ + I+ G
Sbjct: 839 LERARRKMILEYAIISLG 856
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1 SV=2
Length = 1129
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/491 (45%), Positives = 304/491 (61%), Gaps = 38/491 (7%)
Query: 1074 SIKESVSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYL 1133
SI+ E P + G+LR YQ+ G+ WLVSL+ N++ GILADEMGLGKT+Q I+ + YL
Sbjct: 180 SIEFQFRESPAYV-NGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL 238
Query: 1134 METKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNV 1193
+ GPFLV+ P S L W EIN W P ++ + G EER L ++K++ F+V
Sbjct: 239 RYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDV 298
Query: 1194 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPL 1253
++ +YE ++ ++ L KI W YIIIDE HRIKN L+ L+ + S +RLL+TGTPL
Sbjct: 299 VIASYEIII--REKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPL 356
Query: 1254 QNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQ 1313
QNNL ELWALLNFLLP+IF+ ++DF WF+ ES +EE+ I+ +LH
Sbjct: 357 QNNLHELWALLNFLLPDIFSDAQDFDDWFSS--ES-----------TEEDQDKIVKQLHT 403
Query: 1314 VLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS---- 1368
VL+PF+LRR+K VE L K E + S+ QK K++ E++L ++ S G
Sbjct: 404 VLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKT 463
Query: 1369 -VHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPP------IVRLCGKLEMLDRLLPK 1421
+ N +M+LR CNHPYL D P PP +V KL++LD+LL K
Sbjct: 464 RLLNIMMQLRKCCNHPYL-------FDGAEPG---PPYTTDEHLVYNAAKLQVLDKLLKK 513
Query: 1422 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 1481
LK RVL FS M+RLLD++EDY F+ Y Y R+DG T+ DR ID +N DS F+
Sbjct: 514 LKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFV 573
Query: 1482 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 1541
FLL+ RAGG+G+NL +AD V+++D+DWNPQ DLQA RAHRIGQK+ V V R T +VE
Sbjct: 574 FLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVE 633
Query: 1542 EQVRASAEHKL 1552
E++ A KL
Sbjct: 634 EKILERATQKL 644
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/510 (41%), Positives = 301/510 (59%), Gaps = 38/510 (7%)
Query: 1077 ESVSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMET 1136
E +S QP ++GG+LR++Q++G+ W+ L++ NGILADEMGLGKTVQ +A I +L+
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 1137 KNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ------- 1189
+ GP ++VVP S +P W WAP ++ I Y G + R + + +
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 1190 --KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLL 1247
KFNVLLTTYEY++ DR +L I+W ++ +DE HR+KNA L L ++ ++R+L
Sbjct: 482 TMKFNVLLTTYEYILK--DRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRML 539
Query: 1248 LTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLI 1307
+TGTPLQNN++EL AL+NFL+P F ++ FE+ +EE
Sbjct: 540 ITGTPLQNNIKELAALVNFLMPGRFTIDQEID------FEN-----------QDEEQEEY 582
Query: 1308 INRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-GNSK 1365
I+ LH+ ++PF+LRRLK VE LP K ER++R E S Q K + +N ++ +K
Sbjct: 583 IHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAK 642
Query: 1366 GR--SVHNSVMELRNICNHPYLSQLHAEEV------DTLIPKHYLPPIVRLCGKLEMLDR 1417
G S+ N + EL+ NHPYL E V + ++ L ++ GK+ +LD+
Sbjct: 643 GGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQ 702
Query: 1418 LLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDS 1477
LL +LK HRVL FS M R+LD++ DYL+ K + RLDG R ID FN DS
Sbjct: 703 LLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS 762
Query: 1478 PFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETV 1537
F+FLLS RAGG+G+NL ADTV+IFD+DWNPQ DLQA ARAHRIGQK V+V R +
Sbjct: 763 NDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSK 822
Query: 1538 QTVEEQVRASAEHKLGVANQSITAGFFDNN 1567
TVEE+V A K+ + I+ G D N
Sbjct: 823 DTVEEEVLERARKKMILEYAIISLGVTDGN 852
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/555 (40%), Positives = 318/555 (57%), Gaps = 58/555 (10%)
Query: 1079 VSEQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
+ +QP+ + GG+LR++Q++G+ W+ L++ NGILADEMGLGKTVQ +A + YL +
Sbjct: 363 LEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLR 422
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERR-----RLFKEKIVHQKFNV 1193
GPFLVVVP S +P W+ + WA ++ I Y G R+ + + KFN+
Sbjct: 423 QHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNL 482
Query: 1194 LLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPL 1253
LLTTYEY++ DR LS I+W Y+ IDE HR+KN+ L L +++S+RLL+TGTPL
Sbjct: 483 LLTTYEYVLK--DRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPL 540
Query: 1254 QNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQ 1313
QNN+ EL AL++FL+P F E+ + +PDE E I L +
Sbjct: 541 QNNIRELAALVDFLMPGKFEIREEINL-----------EAPDE------EQEAYIRSLQE 583
Query: 1314 VLRPFVLRRLKHKVENELPEKIERLVRCEAS-----AYQKLLMKRVEENLGSIGNSKGRS 1368
L+P++LRRLK VE LP K ER++R E S Y+ +L + SI + S
Sbjct: 584 HLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQIS 643
Query: 1369 VHNSVMELRNICNHPYL-------------SQLHAEEVDTLIPKHYLPPIVRLCGKLEML 1415
+ N V+EL+ NHPYL SQ +EV L ++ GK+ +L
Sbjct: 644 LLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEV--------LKGLIMNSGKMVLL 695
Query: 1416 DRLLPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQ 1475
D+LL +L+ HRVL FS M R+LD++ DYL+ + Y + RLDG R ID FN
Sbjct: 696 DKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAP 755
Query: 1476 DSPFFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFE 1535
+SP F+FLLS RAGG+G+NL ADTVIIFD+DWNPQ DLQA ARAHRIGQK V+V R
Sbjct: 756 NSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLL 815
Query: 1536 TVQTVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRR---EYLESLLR-----ECKKE 1587
+ T+EE V A K+ + I+ G D ++++ + E L ++L+ K E
Sbjct: 816 SKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAE 875
Query: 1588 EAAPVLDDDALNDLL 1602
L+D L+++L
Sbjct: 876 NNQKKLEDMNLDEIL 890
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/488 (44%), Positives = 295/488 (60%), Gaps = 36/488 (7%)
Query: 1078 SVSEQPTCLQGG--KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLME 1135
++ +QP L G +LR+YQ+ GL WL + + ILADEMGLGKT+Q I+ + YL
Sbjct: 469 ALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFH 528
Query: 1136 TKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----K 1190
GPFL+VVP S L W+ E WAP I+ +VY G R + + + +H K
Sbjct: 529 QHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLK 588
Query: 1191 FNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTG 1250
FN L+TTYE L+ D+ L I W ++ +DE HR+KN L L ++S+HRLL+TG
Sbjct: 589 FNALITTYEILLK--DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG 646
Query: 1251 TPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINR 1310
TPLQN+L+ELW+LL+F++P F EDF + K E NG S
Sbjct: 647 TPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRE-NGYQS----------------- 688
Query: 1311 LHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGNS 1364
LH+VL PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L G+ G++
Sbjct: 689 LHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGST 748
Query: 1365 KGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKA 1424
G N VMEL+ CNH YL + EE + + L ++R GKL +LD+LL +L+
Sbjct: 749 SG--FLNIVMELKKCCNHCYLIKP-PEENERENGQEILLSLIRSSGKLILLDKLLTRLRE 805
Query: 1425 TDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLL 1484
+RVL FS M R+LD++ +YLT K Y + RLDG G R +D FN S F FLL
Sbjct: 806 RGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLL 865
Query: 1485 SIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV 1544
S RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T TVEE++
Sbjct: 866 STRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEI 925
Query: 1545 RASAEHKL 1552
A+ K+
Sbjct: 926 IERAKKKM 933
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/484 (43%), Positives = 290/484 (59%), Gaps = 30/484 (6%)
Query: 1079 VSEQPTCLQGG-KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETK 1137
+ QP L G LR+YQM GL WL+ + + + ILADEMGLGKT+Q I + L +
Sbjct: 515 IKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIH 574
Query: 1138 NDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFK-----EKIVHQKFN 1192
+ GPFL VVP S + W+ E + WAP ++ + Y G + R + + E KFN
Sbjct: 575 HLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFN 634
Query: 1193 VLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTP 1252
+LTTYE ++ D+ L +QW +++DE HR+KN L LK + ++HRLL+TGTP
Sbjct: 635 CILTTYEIVLK--DKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTP 692
Query: 1253 LQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLH 1312
LQN+L+ELWALL+F++P+ F++ W N FE N+ D+ RLH
Sbjct: 693 LQNSLKELWALLHFIMPDKFDT------WEN--FEVQHGNAEDKGY----------TRLH 734
Query: 1313 QVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRSVH- 1370
Q L P++LRR+K VE LP K+E+++R E ++ QK K + +N ++ K S
Sbjct: 735 QQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTST 794
Query: 1371 --NSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLKATDHR 1428
N V+EL+ CNH L + E+ L L +++ GKL +LD+LL +LK T HR
Sbjct: 795 FLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHR 854
Query: 1429 VLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRA 1488
VL FS M R+LDV+ DYL + + + RLDG G R +D FN + S F FLLS RA
Sbjct: 855 VLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRA 914
Query: 1489 GGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASA 1548
GG+G+NL ADTVIIFD+DWNPQ DLQAQARAHRIGQK V + R T ++VEEQ+ A
Sbjct: 915 GGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERA 974
Query: 1549 EHKL 1552
+ K+
Sbjct: 975 KQKM 978
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1 PE=1
SV=1
Length = 764
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/522 (43%), Positives = 309/522 (59%), Gaps = 31/522 (5%)
Query: 1086 LQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLV 1145
L GG+L+ YQ+ G++WL+SL+ N LNGILAD+MGLGKT+Q I + +L D GP+LV
Sbjct: 197 LTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLD-GPYLV 255
Query: 1146 VVPSSVLPGWESEINFWAPRIHKIVYCGPPEER---RRLFKEKIVHQKFNVLLTTYEYLM 1202
+ P S L W +EI + P I+ I+Y G +R RR K V KF +++T+YE M
Sbjct: 256 IAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAM 315
Query: 1203 NKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWA 1262
N R L W Y++IDEGHR+KN CKL +LKH + ++LLLTGTPLQNNL ELW+
Sbjct: 316 NDAKRI-LRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWS 374
Query: 1263 LLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEEN--LLIINRLHQVLRPFVL 1320
LLNF+LP+IF S ++F WF+ F N EA EEE ++++LH +LRPF+L
Sbjct: 375 LLNFILPDIFTSHDEFESWFD--FSEKNKN---EATKEEEEKRRAQVVSKLHGILRPFIL 429
Query: 1321 RRLKHKVENELPEKIERLVRCEASAYQK-----LLMKRVEENLGS---IGNSKGRSVHNS 1372
RR+K VE LP K E ++ + +QK L+ +E +LG G ++N
Sbjct: 430 RRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNL 489
Query: 1373 VMELRNICNHPYLSQLHAEEVDTLIPKHYLPP----IVRLCGKLEMLDRLLPKLKATDHR 1428
V++LR CNHP L Q I YL P IV CGK +L+RLL +L A +H+
Sbjct: 490 VIQLRKNCNHPDLLQGQ-------IDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHK 542
Query: 1429 VLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRA 1488
VL FS T+LLD+M+ Y + K + R+DG +R I F+ + S IFLLS RA
Sbjct: 543 VLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRA 602
Query: 1489 GGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASA 1548
GG+G+NL AADT I++D+DWNPQ+DLQA R HRIGQ + V V R T Q++E +V A
Sbjct: 603 GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRA 662
Query: 1549 EHKLGVANQSITAGFFDNNTSAEDRREYLESLLRECKKEEAA 1590
KL + + I G F + E +L K++E A
Sbjct: 663 YSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETA 704
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/536 (40%), Positives = 320/536 (59%), Gaps = 52/536 (9%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
G +LREYQ+ G+ WL+ + N+ N ILADEMGLGKT+Q IAL+ + + + PF+++
Sbjct: 844 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMF-SAGVQSPFMIIA 902
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----------KFNVLLT 1196
P S + WE E + W ++ IVY G R+ + + ++ + KF+ L+T
Sbjct: 903 PLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALIT 961
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNN 1256
T+E +++ D P+L +I W ++IDE HR+KN +CKL LK + H++LLTGTPLQN
Sbjct: 962 TFEMILS--DCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNT 1019
Query: 1257 LEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLR 1316
+EEL++LL+FL P F S +F + F GD L +EE+ + +L +L+
Sbjct: 1020 VEELFSLLHFLEPAQFPSEIEFLREF-------GD------LKTEEQ----VQKLQSILK 1062
Query: 1317 PFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRVEE------NLGSIGNSKGRSVH 1370
P +LRRLK VE L K E ++ E + QK + + E ++G+ NS ++
Sbjct: 1063 PMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQNSNVPNLL 1122
Query: 1371 NSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLDRLLPKL 1422
N++MELR CNHPYL E++ D L P +L +VR GKL +LD+LLP+L
Sbjct: 1123 NTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRL 1182
Query: 1423 KATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIF 1482
KA H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ DS F+F
Sbjct: 1183 KAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1242
Query: 1483 LLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEE 1542
LL RAGG+G+NL AADT +IFD+DWNPQ DLQAQAR HRIGQ + V V R T + E
Sbjct: 1243 LLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYER 1302
Query: 1543 QVRASAEHKLGVANQSITAGFFDNNTSA--EDRREYLESLLRECKKEEAAPVLDDD 1596
++ A KLG+ ++++ N S+ + ++ +E LLR K A ++D++
Sbjct: 1303 EMLDKASLKLGL-DRAVLQSMSGNKESSIQQFSKKEIEDLLR---KGAYAAIMDEN 1354
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/536 (42%), Positives = 318/536 (59%), Gaps = 54/536 (10%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN--DRGPFLVVV 1147
+LREYQ+ G+ WL+ + N+ N ILADEMGLGKT+Q IA +L E N GPFLV+
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIA---FLQEVYNVGIHGPFLVIA 866
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----------KFNVLLT 1196
P S + WE E N W ++ IVY G R+ + + ++ + KF+ L+T
Sbjct: 867 PLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALIT 925
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNN 1256
T+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLTGTPLQN
Sbjct: 926 TFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT 983
Query: 1257 LEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLR 1316
+EEL++LL+FL P+ F S +F + F GD L +EE+ + +L +L+
Sbjct: 984 VEELFSLLHFLEPSQFPSESEFLKDF-------GD------LKTEEQ----VQKLQAILK 1026
Query: 1317 PFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHN 1371
P +LRRLK VE L K E ++ E + QK + + E+N + G + + N
Sbjct: 1027 PMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLN 1086
Query: 1372 SVMELRNICNHPYLSQLHAEEVDT-------LIPKHY-LPPIVRLCGKLEMLDRLLPKLK 1423
++MELR CNHPYL E++ T +IP + L +VR GKL ++D+LLPKLK
Sbjct: 1087 TMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLK 1146
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+FL
Sbjct: 1147 AGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1206
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
L RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T + E +
Sbjct: 1207 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 1266
Query: 1544 VRASAEHKLGVANQSI--TAGFFDNNTSAED-RREYLESLLRECKKEEAAPVLDDD 1596
+ A KLG+ + +G N T + ++ +E LLR K AA + +DD
Sbjct: 1267 MFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLR--KGAYAAIMEEDD 1320
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 297/491 (60%), Gaps = 49/491 (9%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN--DRGPFLVVV 1147
+LREYQ+ G+ WL+ + N+ N ILADEMGLGKT+Q IA +L E N GPFLV+
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIA---FLQEVYNVGIHGPFLVIA 868
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----------KFNVLLT 1196
P S + WE E N W ++ IVY G R+ + + ++ + KF+ L+T
Sbjct: 869 PLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALIT 927
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNN 1256
T+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLTGTPLQN
Sbjct: 928 TFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT 985
Query: 1257 LEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLR 1316
+EEL++LL+FL P+ F S +F + F GD L +EE+ + +L +L+
Sbjct: 986 VEELFSLLHFLEPSQFPSESEFLKDF-------GD------LKTEEQ----VQKLQAILK 1028
Query: 1317 PFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHN 1371
P +LRRLK VE L K E ++ E + QK + + E+N + G + + N
Sbjct: 1029 PMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLN 1088
Query: 1372 SVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLK 1423
++MELR CNHPYL + E +IP+ + L +VR GKL ++D+LLPKLK
Sbjct: 1089 TMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLK 1148
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+FL
Sbjct: 1149 AGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1208
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
L RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T + E +
Sbjct: 1209 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 1268
Query: 1544 VRASAEHKLGV 1554
+ A KLG+
Sbjct: 1269 MFDKASLKLGL 1279
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/491 (43%), Positives = 297/491 (60%), Gaps = 49/491 (9%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN--DRGPFLVVV 1147
+LREYQ+ G+ WL+ + N+ N ILADEMGLGKT+Q IA +L E N GPFLV+
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIA---FLQEVYNVGIHGPFLVIA 866
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----------KFNVLLT 1196
P S + WE E N W ++ IVY G R+ + + ++ + KF+ L+T
Sbjct: 867 PLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALIT 925
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNN 1256
T+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLTGTPLQN
Sbjct: 926 TFEMILS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT 983
Query: 1257 LEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLR 1316
+EEL++LL+FL P+ F S +F + F GD L +EE+ + +L +L+
Sbjct: 984 VEELFSLLHFLEPSQFPSESEFLKDF-------GD------LKTEEQ----VQKLQAILK 1026
Query: 1317 PFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHN 1371
P +LRRLK VE L K E ++ E + QK + + E+N + G + + N
Sbjct: 1027 PMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLN 1086
Query: 1372 SVMELRNICNHPYLSQ-------LHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLK 1423
++MELR CNHPYL + E +IP+ + L +VR GKL ++D+LLPKLK
Sbjct: 1087 TMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLK 1146
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+FL
Sbjct: 1147 AGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1206
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
L RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T + E +
Sbjct: 1207 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 1266
Query: 1544 VRASAEHKLGV 1554
+ A KLG+
Sbjct: 1267 MFDKASLKLGL 1277
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/550 (40%), Positives = 319/550 (58%), Gaps = 56/550 (10%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPS 1149
KLREYQ+ G+ WL+ + N N ILADEMGLGKT+Q I + Y + K GPFLV+ P
Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1015
Query: 1150 SVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKE---KIVH--QKFNVLLTTY 1198
S +P WE E W ++ +VY G RR + FK+ +++ KF+ ++TT+
Sbjct: 1016 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1074
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLE 1258
E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLTGTPLQN +E
Sbjct: 1075 EMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1132
Query: 1259 ELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPF 1318
EL++LL+FL P+ F S F Q F GD L +EE+ + +L +L+P
Sbjct: 1133 ELFSLLHFLEPSRFPSETTFMQEF-------GD------LKTEEQ----VQKLQAILKPM 1175
Query: 1319 VLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHNSV 1373
+LRRLK VE L K E ++ E + QK + + E+N + G++ + N++
Sbjct: 1176 MLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTM 1235
Query: 1374 MELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 1425
MELR CNHPYL E++ + P L +++ GKL ++D+LLPKLKA
Sbjct: 1236 MELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1295
Query: 1426 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 1485
HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+FLL
Sbjct: 1296 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1355
Query: 1486 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 1545
RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T + E ++
Sbjct: 1356 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1415
Query: 1546 ASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLREC-------KKEEAAPVLDD 1595
A KLG+ QS++ N + ++ +E LLR+ +++E + ++
Sbjct: 1416 DKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEE 1475
Query: 1596 DALNDLLARR 1605
D ++ +L RR
Sbjct: 1476 D-IDQILLRR 1484
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/550 (40%), Positives = 318/550 (57%), Gaps = 56/550 (10%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPS 1149
KLREYQ+ G+ WL+ + N N ILADEMGLGKT+Q I + Y + K GPFLV+ P
Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1026
Query: 1150 SVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKE---KIVH--QKFNVLLTTY 1198
S +P WE E W ++ +VY G RR + FK+ +++ KF+ ++TT+
Sbjct: 1027 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1085
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLE 1258
E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLTGTPLQN +E
Sbjct: 1086 EMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1143
Query: 1259 ELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPF 1318
EL++LL+FL P F S F Q F GD L +EE+ + +L +L+P
Sbjct: 1144 ELFSLLHFLEPGRFPSETTFMQEF-------GD------LKTEEQ----VQKLQAILKPM 1186
Query: 1319 VLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHNSV 1373
+LRRLK VE L K E ++ E + QK + + E+N + G++ + N++
Sbjct: 1187 MLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTM 1246
Query: 1374 MELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 1425
MELR CNHPYL E++ + P L +++ GKL ++D+LLPKLKA
Sbjct: 1247 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1306
Query: 1426 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 1485
HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+FLL
Sbjct: 1307 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLC 1366
Query: 1486 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 1545
RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T + E ++
Sbjct: 1367 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1426
Query: 1546 ASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLREC-------KKEEAAPVLDD 1595
A KLG+ QS++ N + ++ +E LLR+ +++E + ++
Sbjct: 1427 DKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEE 1486
Query: 1596 DALNDLLARR 1605
D ++ +L RR
Sbjct: 1487 D-IDQILLRR 1495
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/550 (40%), Positives = 319/550 (58%), Gaps = 56/550 (10%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPS 1149
KLREYQ+ G+ WL+ + N N ILADEMGLGKT+Q I + Y + K GPFLV+ P
Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPL 1025
Query: 1150 SVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKE---KIVH--QKFNVLLTTY 1198
S +P WE E W ++ +VY G RR + FK+ +++ KF+ ++TT+
Sbjct: 1026 STIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF 1084
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLE 1258
E ++ D P+L I W ++IDE HR+KN +CKL LK H++LLTGTPLQN +E
Sbjct: 1085 EMILT--DCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1142
Query: 1259 ELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPF 1318
EL++LL+FL P+ F S F Q F GD L +EE+ + +L +L+P
Sbjct: 1143 ELFSLLHFLEPSRFPSETTFMQEF-------GD------LKTEEQ----VQKLQAILKPM 1185
Query: 1319 VLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHNSV 1373
+LRRLK VE L K E ++ E + QK + + E+N + G++ + N++
Sbjct: 1186 MLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTM 1245
Query: 1374 MELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLDRLLPKLKAT 1425
MELR CNHPYL E++ + P L +++ GKL ++D+LLPKLKA
Sbjct: 1246 MELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1305
Query: 1426 DHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLS 1485
HRVL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+FLL
Sbjct: 1306 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1365
Query: 1486 IRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVR 1545
RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T + E ++
Sbjct: 1366 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1425
Query: 1546 ASAEHKLGVAN---QSITAGFFDNNTSAEDRREYLESLLREC-------KKEEAAPVLDD 1595
A KLG+ QS++ N + ++ +E LLR+ +++E + ++
Sbjct: 1426 DKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEE 1485
Query: 1596 DALNDLLARR 1605
D ++ +L RR
Sbjct: 1486 D-IDQILLRR 1494
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/583 (39%), Positives = 321/583 (55%), Gaps = 53/583 (9%)
Query: 1052 EDESDQAKHYLESNEKYYLMAHSIKESVSEQPTCLQGG--KLREYQMSGLRWLVSLYNNQ 1109
+DE KHY EK +K+ +QP L+G +L YQ+ G+ WL +
Sbjct: 692 DDEDRPVKHYTPPPEK---PTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQG 748
Query: 1110 LNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKI 1169
++ ILADEMGLGKT+Q + + L + + RGPFLV VP S L WE E WAP + I
Sbjct: 749 IDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCI 808
Query: 1170 VYCGPPEERRRL------FKE-----------KIVHQKFNVLLTTYEYLMNKHDRPKLSK 1212
Y G + R + F+E + KFNVLLT+YE + D L
Sbjct: 809 TYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELI--SMDAACLGS 866
Query: 1213 IQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLNFLLPNIF 1272
I W +++DE HR+K+ K L Y +++LLLTGTPLQNNLEEL+ LLNFL + F
Sbjct: 867 IDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKF 926
Query: 1273 NSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELP 1332
N + F F A +S+EE + RLH++L P +LRRLK V +P
Sbjct: 927 NDLQAFQGEF--------------ADVSKEEQ---VKRLHEMLGPHMLRRLKTDVLKNMP 969
Query: 1333 EKIERLVRCEASAYQK----LLMKRVEENLGSIGNSKGRSVHNSVMELRNICNHPYLSQL 1388
K E +VR E SA QK ++ + E L S S+ N +M+L+ CNHPYL
Sbjct: 970 SKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPS 1029
Query: 1389 HAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEDYLT 1447
AEE T Y + + + GKL +L ++L +LKA +HRVL FS MT++LD++ED+L
Sbjct: 1030 AAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLE 1089
Query: 1448 FKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAADTVIIFDTD 1507
+QY+Y R+DG +G R ID+FN + F+FLLS RAGG+G+NL ADTVII+D+D
Sbjct: 1090 GEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSD 1149
Query: 1508 WNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGF---- 1563
WNP D+QA +RAHRIGQ V++ RF T +VEE+V A+ K+ + + + G
Sbjct: 1150 WNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKG 1209
Query: 1564 --FDNNTSAEDRREYLESLLRECKKEEAAPVLDDDALNDLLAR 1604
F + R E L +E KEEA DD A+ +LL R
Sbjct: 1210 ANFTKQELDDILRFGTEDLFKEDDKEEAIH-YDDKAVAELLDR 1251
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/541 (41%), Positives = 320/541 (59%), Gaps = 60/541 (11%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN--DRGPFLV 1145
G +LREYQ+ G+ WL+ + N+ N ILADEMGLGKT+Q I +L E N RGPFLV
Sbjct: 752 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIT---FLQEVYNVGIRGPFLV 808
Query: 1146 VVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----------KFNVL 1194
+ P S + WE E W +++ IVY G R+ + + ++ + KF+ L
Sbjct: 809 IAPLSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDAL 867
Query: 1195 LTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQ 1254
+TT+E +++ D P+L +I+W +IIDE HR+KN +CKL LKH H++LLTGTPLQ
Sbjct: 868 ITTFEMVLS--DCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQ 925
Query: 1255 NNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQV 1314
N +EEL++LL+FL P F+S +F + F GD L +EE+ + +L +
Sbjct: 926 NTVEELFSLLHFLEPTQFSSEAEFLKDF-------GD------LKTEEQ----VQKLQAI 968
Query: 1315 LRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----V 1369
L+P +LRRLK VE L K E ++ E + QK + + E+N + +S +
Sbjct: 969 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQSNTPNL 1028
Query: 1370 HNSVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLDRLLPK 1421
N++MELR CNHPYL E++ + P ++ +VR GKL ++D+LLPK
Sbjct: 1029 LNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPK 1088
Query: 1422 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 1481
L+A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F++ DS F+
Sbjct: 1089 LRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFV 1148
Query: 1482 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 1541
FLL RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V + R T + E
Sbjct: 1149 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYE 1208
Query: 1542 EQVRASAEHKLGVAN---QSITAGFFDNNTSA---EDRREYLESLLRECKKEEAAPVLDD 1595
++ A KLG+ QS++ DN+ S + ++ +E LLR K A ++D+
Sbjct: 1209 REMFDKASLKLGLDKAVLQSMSGR--DNHLSGPIQQFTKKEIEDLLR---KGAYAAIMDE 1263
Query: 1596 D 1596
D
Sbjct: 1264 D 1264
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/552 (39%), Positives = 315/552 (57%), Gaps = 50/552 (9%)
Query: 1081 EQPTCLQ--GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKN 1138
+QP L+ G KL +Q+ G+ WL + + ILADEMGLGKT+Q + + L + +
Sbjct: 255 DQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGH 314
Query: 1139 DRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKI------------ 1186
RGPFL+ VP S L WE E+ WAP ++ + Y G R + K +I
Sbjct: 315 CRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRE 374
Query: 1187 --VHQKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSH 1244
KFNV+LT+YE++ D L I W +++DE HR+++ K L Y+ +
Sbjct: 375 NQTQYKFNVMLTSYEFI--SVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGY 432
Query: 1245 RLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEEN 1304
+LLLTGTPLQNNLEEL+ LLNFL FN + F F +S+EE
Sbjct: 433 KLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTD--------------VSKEEQ 478
Query: 1305 LLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSI-- 1361
+ RLH++L P +LRRLK V +P K E +VR E S+ QK K + +N ++
Sbjct: 479 ---VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQ 535
Query: 1362 -GNSKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPK--HYLPPIVRLCGKLEMLDRL 1418
G + S+ N +M+LR CNHPYL AEE T+ P + + + + GKL++L ++
Sbjct: 536 KGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEA-TISPSGLYEMSSLTKASGKLDLLSKM 594
Query: 1419 LPKLKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSP 1478
L +LKA +HRVL FS MT++L+V+E +L + Y+Y R+DG G R ID+FN S
Sbjct: 595 LKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSE 654
Query: 1479 FFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQ 1538
F+FLLS RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHR+GQK+ V++ RF T
Sbjct: 655 HFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHN 714
Query: 1539 TVEEQVRASAEHKLGVANQSITAGF--FDNNTSAEDRREYL----ESLLRECKKEEAAPV 1592
+VEE++ A+HK+ + + + G N S ++ + L E L ++ K E A
Sbjct: 715 SVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSE--AIH 772
Query: 1593 LDDDALNDLLAR 1604
DD A+ DLL R
Sbjct: 773 YDDKAVADLLDR 784
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/500 (41%), Positives = 286/500 (57%), Gaps = 43/500 (8%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
GG L YQ+ GL WL + + ILADEMGLGKT+Q I + L + + +GPFLV
Sbjct: 733 GGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSA 792
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEER------------------RRLFKEKIVHQ 1189
P S + WE E WAP+ + + Y G + R ++ FK K Q
Sbjct: 793 PLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQ 852
Query: 1190 -KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLL 1248
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ H+LLL
Sbjct: 853 VKFHVLLTSYELITI--DQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLL 910
Query: 1249 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 1308
TGTPLQNNLEEL+ LLNFL P FN+ E F + F A +S+E+ I
Sbjct: 911 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF--------------ADISKEDQ---I 953
Query: 1309 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENLGSIGNS 1364
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 954 KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGG 1013
Query: 1365 KGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLP-PIVRLCGKLEMLDRLLPKLK 1423
S+ N +M+L+ CNHPYL + A E L Y +++ GKL +L ++L KLK
Sbjct: 1014 NQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLK 1073
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +G R ID+FN + F FL
Sbjct: 1074 EQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFL 1133
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
LS RAGG+G+NL ADTVIIFD+DWNP D+QA +RAHRIGQ V++ RF T +VEE+
Sbjct: 1134 LSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEER 1193
Query: 1544 VRASAEHKLGVANQSITAGF 1563
+ A+ K+ + + + G
Sbjct: 1194 ITQVAKRKMMLTHLVVRPGL 1213
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/500 (41%), Positives = 289/500 (57%), Gaps = 43/500 (8%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
GG L YQ+ GL WL + + ILADEMGLGKTVQ I + L + + +GP+LV
Sbjct: 697 GGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSA 756
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEER------------------RRLFK-EKIVH 1188
P S + WE E WAP + + Y G E R +++F+ +K V
Sbjct: 757 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 816
Query: 1189 QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLL 1248
KF+VLLT+YE + D+ L I+W +++DE HR+KN K L Y+ ++LLL
Sbjct: 817 IKFHVLLTSYELITI--DQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 874
Query: 1249 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 1308
TGTPLQNNLEEL+ LLNFL P FN+ E F + F A +S+E+ I
Sbjct: 875 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF--------------ADISKEDQ---I 917
Query: 1309 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEAS----AYQKLLMKRVEENLGSIGNS 1364
+LH +L P +LRRLK V +P K E +VR E S Y K ++ R E L S G
Sbjct: 918 KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG 977
Query: 1365 KGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHY-LPPIVRLCGKLEMLDRLLPKLK 1423
S+ N +M+L+ CNHPYL + A E L Y +V+ GKL +L ++L KL+
Sbjct: 978 NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLR 1037
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
HRVL FS MT++LD++ED+L ++ Y+Y R+DG +GG R ID+FN + F FL
Sbjct: 1038 DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL 1097
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
LS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHRIGQ + V++ RF T +VEE+
Sbjct: 1098 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER 1157
Query: 1544 VRASAEHKLGVANQSITAGF 1563
+ A+ K+ + + + G
Sbjct: 1158 ITQVAKRKMMLTHLVVRPGL 1177
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/491 (42%), Positives = 295/491 (60%), Gaps = 45/491 (9%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
G +LREYQ+ GL WL+ + N+ N ILADEMGLGKT+Q I + ++ T RGPFL++
Sbjct: 857 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIA 915
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKE---KIVH--QKFNVLLT 1196
P S + WE E W I+ +VY G R+ + F++ +I+ +F ++T
Sbjct: 916 PLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIIT 974
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNN 1256
T+E ++ +L+ I+W +IIDE HR+KN +CKL LK H++LLTGTPLQN
Sbjct: 975 TFEMILGGCG--ELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNT 1032
Query: 1257 LEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLR 1316
+EEL++LL+FL P F S F Q F GD L +EE+ + +L +L+
Sbjct: 1033 VEELFSLLHFLEPLRFPSESTFMQEF-------GD------LKTEEQ----VQKLQAILK 1075
Query: 1317 PFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHN 1371
P +LRRLK VE +L K E ++ E + QK + + E+N + G++ + N
Sbjct: 1076 PMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVN 1135
Query: 1372 SVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLDRLLPKLK 1423
++MELR CNHPYL + E++ DT P +L +++ GKL ++D+LLPK+K
Sbjct: 1136 TMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMK 1195
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
A H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ DS F+FL
Sbjct: 1196 AGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1255
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
L RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T + E +
Sbjct: 1256 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYERE 1315
Query: 1544 VRASAEHKLGV 1554
+ A KLG+
Sbjct: 1316 MFDRASLKLGL 1326
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/491 (42%), Positives = 291/491 (59%), Gaps = 49/491 (9%)
Query: 1090 KLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVVPS 1149
+LREYQ+ G+ WL+ + N+ N ILADEMGLGKT+Q I + + + GPFL++ P
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIAPL 518
Query: 1150 SVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ-----------KFNVLLTTY 1198
S + WE E W ++ IVY G R+ + + ++V++ KF+V++TT+
Sbjct: 519 STITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTF 577
Query: 1199 EYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLE 1258
E ++ D P+L KI W +IIDE HR+KN +CKL LK H++LLTGTPLQN++E
Sbjct: 578 EMILA--DCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVE 635
Query: 1259 ELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPF 1318
EL++LLNFL P+ F S F + F GD L +EE+ + +L +L+P
Sbjct: 636 ELFSLLNFLEPSQFPSETAFLEEF-------GD------LKTEEQ----VKKLQSILKPM 678
Query: 1319 VLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRSVHN------ 1371
+LRRLK VE L K E ++ E + QK + + E+N + +KG + HN
Sbjct: 679 MLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL--TKGANQHNMPNLIN 736
Query: 1372 SVMELRNICNHPYLSQLHAEEV--------DTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 1423
++MELR CNHPYL E++ P L +++ GKL ++D+LLPKL
Sbjct: 737 TMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLI 796
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
A H+VL FS M R LD++EDYL ++Y Y R+DG G R A ID+F + DS F+FL
Sbjct: 797 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 856
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
L RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T + E +
Sbjct: 857 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 916
Query: 1544 VRASAEHKLGV 1554
+ A KLG+
Sbjct: 917 MFDKASLKLGL 927
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 301/533 (56%), Gaps = 48/533 (9%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
GG L YQ+ G+ WL ++N + ILADEMGLGKTVQ + + LM+ + +GPFL+
Sbjct: 613 GGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAA 672
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKEKIV-------------H 1188
P S + WE E W P + + Y G E R + F + V +
Sbjct: 673 PLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLEN 732
Query: 1189 QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLL 1248
KF+VLLT+YE + D+ LS I W +++DE HR+KN +L+ Y +R+LL
Sbjct: 733 LKFHVLLTSYECI--NMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLL 790
Query: 1249 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 1308
TGTPLQNNLEEL+ LLNFL P+ FN E F+ F++ +S+E+ I
Sbjct: 791 TGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE--------------ISKEDQ---I 833
Query: 1309 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG- 1366
+LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 834 EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGG 893
Query: 1367 --RSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLK 1423
S+ N +MEL+ CNHPYL E L Y +++ GK +L ++L KLK
Sbjct: 894 TQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLK 953
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
HRVL FS MT +LD++ED+ + Y+Y R+DG +G R ID++N + F+FL
Sbjct: 954 DGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFL 1013
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
LS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T +VEE+
Sbjct: 1014 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEER 1073
Query: 1544 VRASAEHKLGVANQSITAGFFDNNTSAEDRREYLESLLR----ECKKEEAAPV 1592
+ + A+ K+ + + + AG + + + E L+ +LR E KEE APV
Sbjct: 1074 ITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTE-LDDVLRWGTEELFKEEEAPV 1125
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 322/553 (58%), Gaps = 58/553 (10%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
G +LREYQ+ GL WL+ + N+ N ILADEMGLGKT+Q I + ++ T RGPFL++
Sbjct: 856 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLT-GIRGPFLIIA 914
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKE---KIVH--QKFNVLLT 1196
P S + WE E W I+ +VY G R+ + F++ +I+ +F ++T
Sbjct: 915 PLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIIT 973
Query: 1197 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNN 1256
T+E ++ +L+ I W +IIDE HR+KN +CKL LK H++LLTGTPLQN
Sbjct: 974 TFEMILGGCG--ELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNT 1031
Query: 1257 LEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLR 1316
+EEL++LL+FL P F S F Q F GD L +EE+ + +L +L+
Sbjct: 1032 VEELFSLLHFLEPLRFPSESTFMQEF-------GD------LKTEEQ----VQKLQAILK 1074
Query: 1317 PFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRS----VHN 1371
P +LRRLK VE +L K E ++ E + QK + + E+N + G++ + N
Sbjct: 1075 PMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVN 1134
Query: 1372 SVMELRNICNHPYLSQLHAEEV-----DTLIPK---HYLPPIVRLCGKLEMLDRLLPKLK 1423
++MELR CNHPYL + E++ DT P +L +++ GKL ++D+LLPK+K
Sbjct: 1135 TMMELRKCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMK 1194
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
A H+VL FS M R LD++EDYL K+Y Y R+DG G R A ID+F++ DS F+FL
Sbjct: 1195 AGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1254
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
L RAGG+G+NL AADT IIFD+DWNPQ DLQAQAR HRIGQ + V V R T + E +
Sbjct: 1255 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYERE 1314
Query: 1544 VRASAEHKLGVAN---QSITAGFFDNNTSAEDR--REYLESLLRE------CKKEEAAPV 1592
+ A KLG+ QS++ D+N S + ++ +E LLR ++E+
Sbjct: 1315 MFDRASLKLGLDKAVLQSMSGR--DSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSK 1372
Query: 1593 LDDDALNDLLARR 1605
++ ++ +L RR
Sbjct: 1373 FCEEDIDQILLRR 1385
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus GN=CHD1
PE=1 SV=1
Length = 1719
Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 209/489 (42%), Positives = 298/489 (60%), Gaps = 37/489 (7%)
Query: 1078 SVSEQPTCLQGGK---LREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLM 1134
++ +QP+ + G + LR+YQ++GL WL + + ILADEMGLGKT+Q I+ + YL
Sbjct: 461 ALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLF 520
Query: 1135 ETKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ----- 1189
GPFL+VVP S L W+ EI WAP+++ +VY G R + + +H
Sbjct: 521 HEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRL 580
Query: 1190 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 1249
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 581 KFNILLTTYEILLK--DKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 638
Query: 1250 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 1309
GTPLQN+L+ELW+LL+F++P F+S EDF + K E
Sbjct: 639 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------------------YA 680
Query: 1310 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGN 1363
LH+ L PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L GS G+
Sbjct: 681 SLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGS 740
Query: 1364 SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 1423
+ G N +MEL+ CNH YL + ++ + + L ++R GKL +LD+LL +L+
Sbjct: 741 TSG--FLNIMMELKKCCNHCYLIKP-PDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLR 797
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FL
Sbjct: 798 ERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFL 857
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
LS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE
Sbjct: 858 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 917
Query: 1544 VRASAEHKL 1552
+ A+ K+
Sbjct: 918 ILERAKKKM 926
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 362 bits (929), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/502 (41%), Positives = 289/502 (57%), Gaps = 47/502 (9%)
Query: 1088 GGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLVVV 1147
GGKL YQ+ GL WL ++N + ILADEMGLGKTVQ + + LM+ + +GPFL+
Sbjct: 599 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 658
Query: 1148 PSSVLPGWESEINFWAPRIHKIVYCGPPEERRRL------FKEKIV-------------H 1188
P S + WE E W P + + Y G + R L F E V +
Sbjct: 659 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTEN 718
Query: 1189 QKFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLL 1248
KF+VLLT+YE + D+ LS I+W +++DE HR+KN +L Y +R+LL
Sbjct: 719 MKFHVLLTSYETI--NMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLL 776
Query: 1249 TGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLII 1308
TGTPLQNNLEEL+ LLNFL FN E F+ FN+ +S+E+ I
Sbjct: 777 TGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE--------------ISKEDQ---I 819
Query: 1309 NRLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKG- 1366
+LH +L P +LRRLK V +P K E +VR E SA QK K + N ++ G
Sbjct: 820 EKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGG 879
Query: 1367 --RSVHNSVMELRNICNHPYL---SQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPK 1421
S+ N +MEL+ CNHPYL ++L A + + + +++ GK +L ++L K
Sbjct: 880 TQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGM--YEGTALIKNSGKFVLLQKMLRK 937
Query: 1422 LKATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFI 1481
LK HRVL FS MTR+LD+MED ++ YRY R+DG G R ID++N + FI
Sbjct: 938 LKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFI 997
Query: 1482 FLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVE 1541
FLLS RAGG+G+NL ADTVII+D+DWNP D+QA +RAHR+GQK V++ RF T ++VE
Sbjct: 998 FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVE 1057
Query: 1542 EQVRASAEHKLGVANQSITAGF 1563
E++ + A+ K+ + + + AG
Sbjct: 1058 EKITSVAKKKMLLNHLVVRAGL 1079
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 360 bits (924), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 296/489 (60%), Gaps = 37/489 (7%)
Query: 1078 SVSEQPTCL---QGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLM 1134
++ +QP+ + +G +LR+YQ++GL WL + + ILADEMGLGKT+Q I+ + YL
Sbjct: 465 ALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLF 524
Query: 1135 ETKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ----- 1189
GPFL+VVP S L W+ EI WA +++ +VY G R + + H
Sbjct: 525 HEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRL 584
Query: 1190 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 1249
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 585 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 642
Query: 1250 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 1309
GTPLQN+L+ELW+LL+F++P F+S EDF + K E
Sbjct: 643 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------------------YA 684
Query: 1310 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGN 1363
LH+ L PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L GS G+
Sbjct: 685 SLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGS 744
Query: 1364 SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 1423
+ G N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+
Sbjct: 745 TSG--FLNIMMELKKCCNHCYLIKP-PDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLR 801
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FL
Sbjct: 802 ERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFL 861
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
LS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE
Sbjct: 862 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 921
Query: 1544 VRASAEHKL 1552
+ A+ K+
Sbjct: 922 ILERAKKKM 930
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 360 bits (924), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 297/489 (60%), Gaps = 37/489 (7%)
Query: 1078 SVSEQPTCL---QGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLM 1134
++ +QP+ + +G +LR+YQ++GL WL + + ILADEMGLGKT+Q I+ + YL
Sbjct: 463 ALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLF 522
Query: 1135 ETKNDRGPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQ----- 1189
GPFL+VVP S L W+ EI WA +++ +VY G R + + +H
Sbjct: 523 HEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRL 582
Query: 1190 KFNVLLTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLT 1249
KFN+LLTTYE L+ D+ L + W +I +DE HR+KN L L ++S+HRLL+T
Sbjct: 583 KFNILLTTYEILLK--DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 640
Query: 1250 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIIN 1309
GTPLQN+L+ELW+LL+F++P F+S EDF + K E
Sbjct: 641 GTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG------------------YA 682
Query: 1310 RLHQVLRPFVLRRLKHKVENELPEKIERLVRCEASA----YQKLLMKRVEENL--GSIGN 1363
LH+ L PF+LRR+K VE LP K+E+++R E SA Y K ++ R + L GS G+
Sbjct: 683 SLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGS 742
Query: 1364 SKGRSVHNSVMELRNICNHPYLSQLHAEEVDTLIPKHYLPPIVRLCGKLEMLDRLLPKLK 1423
+ G N +MEL+ CNH YL + + + + L ++R GKL +LD+LL +L+
Sbjct: 743 TSG--FLNIMMELKKCCNHCYLIKP-PDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLR 799
Query: 1424 ATDHRVLFFSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFL 1483
+RVL FS M R+LD++ +YL ++Q+ + RLDG G R +D FN + S F FL
Sbjct: 800 ERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFL 859
Query: 1484 LSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQ 1543
LS RAGG+G+NL +ADTV+IFD+DWNPQ DLQAQARAHRIGQK+ V + R T +VEE
Sbjct: 860 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEED 919
Query: 1544 VRASAEHKL 1552
+ A+ K+
Sbjct: 920 ILERAKKKM 928
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 360 bits (923), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 217/543 (39%), Positives = 303/543 (55%), Gaps = 84/543 (15%)
Query: 1081 EQPTCLQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDR 1140
+QP GG +R YQ+ G+ WL L+ N +NGILADEMGLGKTVQ IA I LM +
Sbjct: 196 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 254
Query: 1141 GPFLVVVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQK------FNVL 1194
GPFLV P S LP W +E + P I ++Y G E+RR+L K +H++ V+
Sbjct: 255 GPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKN--IHKRQGTLQIHPVV 312
Query: 1195 LTTYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQ 1254
+T++E M D+ L W Y+I+DEGHRIKN C+L +LK + + ++LLLTGTPLQ
Sbjct: 313 VTSFEIAM--RDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQ 370
Query: 1255 NNLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQV 1314
NNL ELW+LLNFLLP++F+ + F WF+ S + + D E+N+L + LHQ+
Sbjct: 371 NNLSELWSLLNFLLPDVFDDLKSFESWFD--ITSLSETAEDIIAKEREQNVL--HMLHQI 426
Query: 1315 LRPFVLRRLKHKVENELPEKIERLVR---C--EASAYQKLLMKRVEENLGSI-------- 1361
L PF+LRRLK V E+P K E +V C + Y ++ + + GS
Sbjct: 427 LTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELS 486
Query: 1362 --GNSKGRS---------------------------------VHNSV-------MELRNI 1379
G K RS V ++ ++LRNI
Sbjct: 487 PTGRPKRRSRKSINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNI 546
Query: 1380 -------CNHPYLSQLHAEEVDTLIPKHYL-PPIVRLCGKLEMLDRLLPKLKATDHRVLF 1431
CNHPY+ + +D + + + +V GK +LDR+LP+LK H+VL
Sbjct: 547 MMLLRKCCNHPYMIEY---PIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLV 603
Query: 1432 FSTMTRLLDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGV 1491
FS MT +LD++ DY + + + RLDG S +R I FN D F+FL+S RAGG+
Sbjct: 604 FSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFN-TDPDVFLFLVSTRAGGL 662
Query: 1492 GVNLQAADTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQV--RASAE 1549
G+NL AADTVII+D+DWNPQ DLQAQ R HRIGQ + V+V R T T+++++ RA+A+
Sbjct: 663 GINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAK 722
Query: 1550 HKL 1552
KL
Sbjct: 723 RKL 725
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 357 bits (915), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 209/486 (43%), Positives = 280/486 (57%), Gaps = 34/486 (6%)
Query: 1086 LQGGKLREYQMSGLRWLVSLYNNQLNGILADEMGLGKTVQVIALICYLMETKNDRGPFLV 1145
L G +LR YQ+ G+ WLV ++ Q IL DEMGLGKT Q IAL+ YL+ ND GPFLV
Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLV 94
Query: 1146 VVPSSVLPGWESEINFWAPRIHKIVYCGPPEERRRLFKEKIVHQKFNVLLTTYEYLMNKH 1205
+ P SVL W+ E+ +AP + + Y G EER RL ++ F+VLLTTYE +
Sbjct: 95 LCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLK-- 152
Query: 1206 DRPKLSKIQWHYIIIDEGHRIKNASCKLNADLKHYQSSHRLLLTGTPLQNNLEELWALLN 1265
D L W + +DE HR+KN S L+ L + + RLLLTGTP+QN+L EL++LL
Sbjct: 153 DASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLC 212
Query: 1266 FLLPNIF--NSSEDFSQWFNKPFESNGDNSPDEALLSEEENLLIINRLHQVLRPFVLRRL 1323
+ P++F EDF Q + D + SE LH++L+PF+LRR+
Sbjct: 213 VVEPDLFCREQVEDFVQRYQ-------DIEKESKSASE---------LHRLLQPFLLRRV 256
Query: 1324 KHKVENELPEKIERLVRCEASAYQKLLMKRV-EENLGSIGNSKGRSV--HNSVMELRNIC 1380
K +V ELP+K E +V SA QK K + ++L + N + V N + +LR
Sbjct: 257 KAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILTQLRKCV 316
Query: 1381 NHPYLSQLHAEEVDTLIPKHYL--PPIVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRL 1438
+HPYL D + P+ + ++ GKL +LDRLL L + HRVL FS MT +
Sbjct: 317 DHPYL-------FDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHM 369
Query: 1439 LDVMEDYLTFKQYRYLRLDGHTSGGDRGALIDKFNQQDSPFFIFLLSIRAGGVGVNLQAA 1498
LD+++DY+ ++ Y Y R+DG G +R I F Q P F+FLLS RAGGVG+NL AA
Sbjct: 370 LDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQ--PIFVFLLSTRAGGVGMNLTAA 427
Query: 1499 DTVIIFDTDWNPQVDLQAQARAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQS 1558
DTVI D+D+NPQ DLQA ARAHRIGQ + V V+R TVEE V A KL + N
Sbjct: 428 DTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMV 487
Query: 1559 ITAGFF 1564
I G F
Sbjct: 488 IEGGHF 493
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 587,431,358
Number of Sequences: 539616
Number of extensions: 25505132
Number of successful extensions: 81059
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 1428
Number of HSP's that attempted gapping in prelim test: 72329
Number of HSP's gapped (non-prelim): 6427
length of query: 1605
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1474
effective length of database: 120,879,763
effective search space: 178176770662
effective search space used: 178176770662
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)