BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000380
(1601 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 2100 bits (5441), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1086/1644 (66%), Positives = 1283/1644 (78%), Gaps = 81/1644 (4%)
Query: 9 EGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKT----DKDPKQIARKYQL 64
+G P GG I A A+ G A+ G+ KDP+ IAR YQL
Sbjct: 3 KGQAPGGGDPGITVA----------ALPITGLAADEGEGSSSGASSSKKDPRTIARGYQL 52
Query: 65 ELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKV 124
ELCKKA+EENIIVY+GTGCGKTHIAVLLI+ L HLIRKPQK+IC+FLAPTVALVQQQA+V
Sbjct: 53 ELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICVFLAPTVALVQQQARV 112
Query: 125 IEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLI 184
IEESI FKV T+CG S+RL++H DWEKE +QYEV VM PQILL LYH FI+MELIALLI
Sbjct: 113 IEESIDFKVGTYCGNSRRLRTHHDWEKEFEQYEVFVMTPQILLRGLYHCFIRMELIALLI 172
Query: 185 FDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLE 244
FDECHHAQV+SNHPYA+IMK FYK ++PRIFGMTASPVVGKGAS QANLPK INSLE
Sbjct: 173 FDECHHAQVQSNHPYAEIMKVFYKTSSTRLPRIFGMTASPVVGKGASDQANLPKCINSLE 232
Query: 245 NLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISAL 304
NLL AKVYSVE+ ++LE FV+SP + VY Y P IN TSS TC ++L EIK Q + +L
Sbjct: 233 NLLHAKVYSVENQQELERFVASPKINVYCYHPDINMTSS---TC-KKLEEIK-SQCVLSL 287
Query: 305 SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGN 364
R + DH+SLR+T K L R+HD++ F +ENLG+ GAL AS ILLSGD RNEL+EAEG+
Sbjct: 288 RRNVEDHKSLRSTKKLLQRMHDNLIFSMENLGLWGALQASRILLSGDHAERNELMEAEGS 347
Query: 365 TIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ 423
DD LC ++ Q++ V A+ C +DGI SD+S ++VLKEPFFS+KLLRLIGILSTFR Q
Sbjct: 348 ASDDRLCDKYLDQSANVLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGILSTFRRQP 407
Query: 424 HMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSG 483
+MKCI+FVNRIVTAR+L+YILQNLKFL+ W+C FLVGV++GLKSMSR M IL+KFRS
Sbjct: 408 NMKCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNIILDKFRSN 467
Query: 484 ELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE 543
ELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG Q+E
Sbjct: 468 ELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGKQKE 527
Query: 544 LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL 603
+DLI++F K+EDRMN EI RTSS+AFT EERIYKVDSSGA IS+ Y +SLLH+YCSKL
Sbjct: 528 IDLIEHFKKDEDRMNMEISVRTSSEAFTDLEERIYKVDSSGASISSVYSISLLHQYCSKL 587
Query: 604 PHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
HDE+FNPKP+FYYFDD GGT+C I LP++APIHQIV TPQSSMEAAKKDACLKAI+DLH
Sbjct: 588 LHDEYFNPKPEFYYFDDSGGTVCQINLPSSAPIHQIVSTPQSSMEAAKKDACLKAIQDLH 647
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPV 723
LGALNDYLLP + NA E E ML SSDSDS E E SR ELHEMLVPA L+ SW+ ++ +
Sbjct: 648 VLGALNDYLLPDQGNAHE-ELMLVSSDSDSCEDEDSREELHEMLVPAALKDSWSNLEH-I 705
Query: 724 RLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG---- 779
LN Y+++F P P DRIYR+FGLFVK+ LP EAE + +DLHL+ GRSVMT+LVPSG
Sbjct: 706 CLNSYYIKFTPIPEDRIYRKFGLFVKAPLPAEAERMVLDLHLSHGRSVMTELVPSGVTEF 765
Query: 780 ----IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN---- 831
I+QA FQEM+L+VIL+RS F +E V LGK D+C+SSSSTFYLLLPVI ++
Sbjct: 766 DENEILQAHNFQEMYLQVILNRSIFETEIVHLGKSDFCKSSSSTFYLLLPVILNECENMI 825
Query: 832 SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFY 891
+VDW+IIRRCLSSP+F P VD K P + L+L +G ESDV NSLVYA +KK F+
Sbjct: 826 TVDWQIIRRCLSSPIFRNPADRVD-KLPPLNDHLRLADGVYRESDVINSLVYAPYKKAFF 884
Query: 892 LVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL 951
V+ I +NGYSPYKD SSH+++ ++GIHL+ PKQPLL AK LF LRNLLHNRK
Sbjct: 885 FVSRISAGRNGYSPYKD---SSHLEYTWKTFGIHLEFPKQPLLSAKRLFSLRNLLHNRKH 941
Query: 952 EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA 1011
SESHELEE+F D+PPELC LKIIGFSKDIGSS+SLLPSIMHRLENLLVAIELK++LSA
Sbjct: 942 GSSESHELEEHFMDIPPELCHLKIIGFSKDIGSSVSLLPSIMHRLENLLVAIELKNMLSA 1001
Query: 1012 SFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
SFPEGAE++A +L+ALTTEKC ERFSLERLE+LGDAFLK+AVGR LFLL+D +DEGELT
Sbjct: 1002 SFPEGAEITAHRVLEALTTEKCLERFSLERLEVLGDAFLKFAVGRRLFLLYDALDEGELT 1061
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDG 1131
RRRSN VNNSNL KLA R NLQVYIRDQ FDP QFFALG RCPRIC KETE IHS+ G
Sbjct: 1062 RRRSNVVNNSNLFKLAVRRNLQVYIRDQSFDPGQFFALGHRCPRICEKETEMAIHSRC-G 1120
Query: 1132 RAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEAS 1191
+ P EVRCSK HHWLHKKTIADVVEALVGAFI DSGFKAAT FLKWIGIQV+FEA
Sbjct: 1121 KTP---TTEVRCSKCHHWLHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGIQVDFEAF 1177
Query: 1192 QVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEF 1250
QV N CISS S++ L++S D+ LE LLGH+FLH+GLLLQA VHPS+N+ GGCYQRLEF
Sbjct: 1178 QVINACISSTSYMQLASSTDVPALEKLLGHEFLHKGLLLQAIVHPSYNKHGGGCYQRLEF 1237
Query: 1251 LGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLS 1310
LGDAVLDYLITSYLYSVYPKLKPGQ+TDLRS+ VNN++FANVAV +S ++FLI D++ LS
Sbjct: 1238 LGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDASSLS 1297
Query: 1311 ETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD 1370
E I YVD++ TP+ +++ EGP+CPK LGDLVES +GAILLD GF+LN W IMLS LD
Sbjct: 1298 EAIKKYVDFIRTPTLDKDLHEGPKCPKALGDLVESCMGAILLDKGFDLNHAWNIMLSILD 1357
Query: 1371 PILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNL 1430
I+ FS+LQLNPIREL ELC ++ DLQFP+ K+GG FL EAKV+G D+ +A ATN
Sbjct: 1358 RIMSFSDLQLNPIRELQELCQHHNWDLQFPTSKQGGTFLVEAKVSG--DDICTTASATNA 1415
Query: 1431 SRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNV 1490
+RK+A RIAS QLF KLK GY+ ++SLE +LKSS K EA+LIGYDE PI+ VA D
Sbjct: 1416 NRKDARRIASNQLFKKLKDQGYMLHSESLEEVLKSSSKMEAKLIGYDEKPID-VAFDSFE 1474
Query: 1491 FEKLKISEPQGGSSC------------DIGSP---------------------SLTTGGL 1517
FEKLK+ E S C ++ SP + GG+
Sbjct: 1475 FEKLKMQE-HSNSDCNRKIQPMKMKPKNVCSPCIKPVSDLPQFQIKASEQQPHEIVQGGV 1533
Query: 1518 QNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQ 1576
Q S ++R+YE+CAAN WKPP+F+CCKEEG SHLKLFT ++ ++IE ++EC G P+
Sbjct: 1534 QKVSTKARMYEICAANYWKPPSFECCKEEGPSHLKLFTVKLTMKIEDGSGLLLECYGYPK 1593
Query: 1577 AKKKGAAEHAAEGMLWCLEREGYL 1600
+ KK AA+ AAEG + L++EGY
Sbjct: 1594 STKKAAADSAAEGAIAYLKQEGYF 1617
>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 2096 bits (5430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1086/1645 (66%), Positives = 1283/1645 (77%), Gaps = 82/1645 (4%)
Query: 9 EGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKT----DKDPKQIARKYQL 64
+G P GG I A A+ G A+ G+ KDP+ IAR YQL
Sbjct: 3 KGQAPGGGDPGITVA----------ALPITGLAADEGEGSSSGASSSKKDPRTIARGYQL 52
Query: 65 ELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKV 124
ELCKKA+EENIIVY+GTGCGKTHIAVLLI+ L HLIRKPQK+IC+FLAPTVALVQQQA+V
Sbjct: 53 ELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICVFLAPTVALVQQQARV 112
Query: 125 IEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLI 184
IEESI FKV T+CG S+RL++H DWEKE +QYEV VM PQILL LYH FI+MELIALLI
Sbjct: 113 IEESIDFKVGTYCGNSRRLRTHHDWEKEFEQYEVFVMTPQILLRGLYHCFIRMELIALLI 172
Query: 185 FDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLE 244
FDECHHAQV+SNHPYA+IMK FYK ++PRIFGMTASPVVGKGAS QANLPK INSLE
Sbjct: 173 FDECHHAQVQSNHPYAEIMKVFYKTSSTRLPRIFGMTASPVVGKGASDQANLPKCINSLE 232
Query: 245 NLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISAL 304
NLL AKVYSVE+ ++LE FV+SP + VY Y P IN TSS TC ++L EIK Q + +L
Sbjct: 233 NLLHAKVYSVENQQELERFVASPKINVYCYHPDINMTSS---TC-KKLEEIK-SQCVLSL 287
Query: 305 SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGN 364
R + DH+SLR+T K L R+HD++ F +ENLG+ GAL AS ILLSGD RNEL+EAEG+
Sbjct: 288 RRNVEDHKSLRSTKKLLQRMHDNLIFSMENLGLWGALQASRILLSGDHAERNELMEAEGS 347
Query: 365 TIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ 423
DD LC ++ Q++ V A+ C +DGI SD+S ++VLKEPFFS+KLLRLIGILSTFR Q
Sbjct: 348 ASDDRLCDKYLDQSANVLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGILSTFRRQP 407
Query: 424 HMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSG 483
+MKCI+FVNRIVTAR+L+YILQNLKFL+ W+C FLVGV++GLKSMSR M IL+KFRS
Sbjct: 408 NMKCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNIILDKFRSN 467
Query: 484 ELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE 543
ELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG Q+E
Sbjct: 468 ELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGKQKE 527
Query: 544 LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL 603
+DLI++F K+EDRMN EI RTSS+AFT EERIYKVDSSGA IS+ Y +SLLH+YCSKL
Sbjct: 528 IDLIEHFKKDEDRMNMEISVRTSSEAFTDLEERIYKVDSSGASISSVYSISLLHQYCSKL 587
Query: 604 PHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
HDE+FNPKP+FYYFDD GGT+C I LP++APIHQIV TPQSSMEAAKKDACLKAI+DLH
Sbjct: 588 LHDEYFNPKPEFYYFDDSGGTVCQINLPSSAPIHQIVSTPQSSMEAAKKDACLKAIQDLH 647
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEG-EGSRGELHEMLVPAVLRQSWTKSQYP 722
LGALNDYLLP + NA E E ML SSDSDS E E SR ELHEMLVPA L+ SW+ ++
Sbjct: 648 VLGALNDYLLPDQGNAHE-ELMLVSSDSDSCEADEDSREELHEMLVPAALKDSWSNLEH- 705
Query: 723 VRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG--- 779
+ LN Y+++F P P DRIYR+FGLFVK+ LP EAE + +DLHL+ GRSVMT+LVPSG
Sbjct: 706 ICLNSYYIKFTPIPEDRIYRKFGLFVKAPLPAEAERMVLDLHLSHGRSVMTELVPSGVTE 765
Query: 780 -----IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN--- 831
I+QA FQEM+L+VIL+RS F +E V LGK D+C+SSSSTFYLLLPVI ++
Sbjct: 766 FDENEILQAHNFQEMYLQVILNRSIFETEIVHLGKSDFCKSSSSTFYLLLPVILNECENM 825
Query: 832 -SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWF 890
+VDW+IIRRCLSSP+F P VD K P + L+L +G ESDV NSLVYA +KK F
Sbjct: 826 ITVDWQIIRRCLSSPIFRNPADRVD-KLPPLNDHLRLADGVYRESDVINSLVYAPYKKAF 884
Query: 891 YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRK 950
+ V+ I +NGYSPYKD SSH+++ ++GIHL+ PKQPLL AK LF LRNLLHNRK
Sbjct: 885 FFVSRISAGRNGYSPYKD---SSHLEYTWKTFGIHLEFPKQPLLSAKRLFSLRNLLHNRK 941
Query: 951 LEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
SESHELEE+F D+PPELC LKIIGFSKDIGSS+SLLPSIMHRLENLLVAIELK++LS
Sbjct: 942 HGSSESHELEEHFMDIPPELCHLKIIGFSKDIGSSVSLLPSIMHRLENLLVAIELKNMLS 1001
Query: 1011 ASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
ASFPEGAE++A +L+ALTTEKC ERFSLERLE+LGDAFLK+AVGR LFLL+D +DEGEL
Sbjct: 1002 ASFPEGAEITAHRVLEALTTEKCLERFSLERLEVLGDAFLKFAVGRRLFLLYDALDEGEL 1061
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD 1130
TRRRSN VNNSNL KLA R NLQVYIRDQ FDP QFFALG RCPRIC KETE IHS+
Sbjct: 1062 TRRRSNVVNNSNLFKLAVRRNLQVYIRDQSFDPGQFFALGHRCPRICEKETEMAIHSRC- 1120
Query: 1131 GRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA 1190
G+ P EVRCSK HHWLHKKTIADVVEALVGAFI DSGFKAAT FLKWIGIQV+FEA
Sbjct: 1121 GKTP---TTEVRCSKCHHWLHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGIQVDFEA 1177
Query: 1191 SQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLE 1249
QV N CISS S++ L++S D+ LE LLGH+FLH+GLLLQA VHPS+N+ GGCYQRLE
Sbjct: 1178 FQVINACISSTSYMQLASSTDVPALEKLLGHEFLHKGLLLQAIVHPSYNKHGGGCYQRLE 1237
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDAVLDYLITSYLYSVYPKLKPGQ+TDLRS+ VNN++FANVAV +S ++FLI D++ L
Sbjct: 1238 FLGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDASSL 1297
Query: 1310 SETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
SE I YVD++ TP+ +++ EGP+CPK LGDLVES +GAILLD GF+LN W IMLS L
Sbjct: 1298 SEAIKKYVDFIRTPTLDKDLHEGPKCPKALGDLVESCMGAILLDKGFDLNHAWNIMLSIL 1357
Query: 1370 DPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATN 1429
D I+ FS+LQLNPIREL ELC ++ DLQFP+ K+GG FL EAKV+G D+ +A ATN
Sbjct: 1358 DRIMSFSDLQLNPIRELQELCQHHNWDLQFPTSKQGGTFLVEAKVSG--DDICTTASATN 1415
Query: 1430 LSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDN 1489
+RK+A RIAS QLF KLK GY+ ++SLE +LKSS K EA+LIGYDE PI+ VA D
Sbjct: 1416 ANRKDARRIASNQLFKKLKDQGYMLHSESLEEVLKSSSKMEAKLIGYDEKPID-VAFDSF 1474
Query: 1490 VFEKLKISEPQGGSSC------------DIGSP---------------------SLTTGG 1516
FEKLK+ E S C ++ SP + GG
Sbjct: 1475 EFEKLKMQE-HSNSDCNRKIQPMKMKPKNVCSPCIKPVSDLPQFQIKASEQQPHEIVQGG 1533
Query: 1517 LQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEP 1575
+Q S ++R+YE+CAAN WKPP+F+CCKEEG SHLKLFT ++ ++IE ++EC G P
Sbjct: 1534 VQKVSTKARMYEICAANYWKPPSFECCKEEGPSHLKLFTVKLTMKIEDGSGLLLECYGYP 1593
Query: 1576 QAKKKGAAEHAAEGMLWCLEREGYL 1600
++ KK AA+ AAEG + L++EGY
Sbjct: 1594 KSTKKAAADSAAEGAIAYLKQEGYF 1618
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 2071 bits (5367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1079/1654 (65%), Positives = 1285/1654 (77%), Gaps = 78/1654 (4%)
Query: 1 MPDGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIAR 60
MPDGE+ + S IC ++G G E + Q+ +KDP++IAR
Sbjct: 1 MPDGEADISPDDSSS----ICTVNR---------IAGDDDGDECNSMPQQPEKDPRKIAR 47
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
KYQLELCKKA+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP K++C+FLAPTVALVQQ
Sbjct: 48 KYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPLKNVCVFLAPTVALVQQ 107
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
+VIE+SI FKV +CG S LKSH DWEKEI+Q EVLVM PQILL+ L H FIKMELI
Sbjct: 108 -VRVIEQSIDFKVGVYCGNSNHLKSHRDWEKEIEQNEVLVMTPQILLHTLGHSFIKMELI 166
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
+LLIFDECHHAQV+S+HPYA+IMK FYK K PRIFGMTASPVVGKGAS QANLPKSI
Sbjct: 167 SLLIFDECHHAQVQSSHPYAEIMKVFYKTGDGKFPRIFGMTASPVVGKGASNQANLPKSI 226
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQY 300
NSLENLLDAKVYSVED E+LE FV+SPVVR+Y Y PV N+ SSSY+T +L EIKR+
Sbjct: 227 NSLENLLDAKVYSVEDNEELELFVASPVVRIYLYAPVANEKSSSYMTYFSKLEEIKRKCL 286
Query: 301 ISALSRKLHDHQSL---RNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNE 357
+ L +K QSL +N K R+HD++ FCLENLG GAL A ILLS D N
Sbjct: 287 LE-LHKKADSCQSLHGLQNAKKVFIRMHDNVVFCLENLGFWGALQACKILLSDDHFEWNA 345
Query: 358 LIEAEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL 416
LIEAEGN ID S+C ++ +QA+ +FA++C +D IA DLS +EVL EPFFS+KLLRLIGIL
Sbjct: 346 LIEAEGN-IDASVCDKYLAQAANMFASVCTKDCIAFDLSSVEVLTEPFFSRKLLRLIGIL 404
Query: 417 STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSI 476
STFRLQ +MK IVFVNRIVTAR+LSY+LQNLKFL SW+C FLVGV++GLKSMSR M SI
Sbjct: 405 STFRLQPNMKGIVFVNRIVTARSLSYVLQNLKFLISWKCDFLVGVHSGLKSMSRKTMNSI 464
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
LEKF++G+LNLL+ATKVGEEGLDIQTCCLV+RFDLPETVASFIQSRGRARMPQSEYAFLV
Sbjct: 465 LEKFKTGKLNLLIATKVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEYAFLV 524
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLL 596
DSGNQ+ELDLI+ F ++EDRMN EI RTS++ F EE++YKVD SGACIS+ Y +SLL
Sbjct: 525 DSGNQKELDLIERFRRDEDRMNMEISSRTSNETFVSIEEKVYKVDESGACISSAYSISLL 584
Query: 597 HRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACL 656
H YCSKLPHDE+F+PKP+F++FDDLGGTICHIILPANAP+HQIVGTPQSS EAAKKDACL
Sbjct: 585 HHYCSKLPHDEYFDPKPQFFFFDDLGGTICHIILPANAPVHQIVGTPQSSREAAKKDACL 644
Query: 657 KAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW 716
KAIE LHKLG+L+++LLP E + E E ML SS+ ++ EGEG RGELHEMLVPAV ++S
Sbjct: 645 KAIEQLHKLGSLSNFLLPHEKDVNE-ESMLASSEPENNEGEGVRGELHEMLVPAVFKESL 703
Query: 717 TKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLV 776
T S+ + L+ YF++F P P DRIY++FGLF+++ LP EAE ++++LHLA GR V TKLV
Sbjct: 704 TSSENWINLHSYFIKFCPVPEDRIYKKFGLFIRAPLPLEAEQMELNLHLACGRYVATKLV 763
Query: 777 PSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIF 828
P G I QA FQEMFLKVILDRS+F EFV LGK+ + ESS S FYLLLPV+
Sbjct: 764 PLGCLAFHRDEITQAIYFQEMFLKVILDRSDFVPEFVTLGKNSFFESSPS-FYLLLPVLL 822
Query: 829 --HKN--SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYA 884
H N +VDW+ + RCLSSPVF V+++ LPS LQL NG S D+ENSLVY
Sbjct: 823 CDHGNRVTVDWETVGRCLSSPVFRC----VEKECLPSDDCLQLANGCRSIRDIENSLVYI 878
Query: 885 THKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRN 944
HKK FY +TNI KN SP+K S +SS+++ LI +GI LK+P+QPLL+AKPLF L N
Sbjct: 879 PHKKHFYFITNIDRGKNARSPHKCSSTSSYMEFLIQRFGIQLKYPEQPLLQAKPLFSLHN 938
Query: 945 LLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
LLHNR+ EDS + EL+EY D PPELC+LKIIGFSKDIGSS+SLLPSIMHRLENLLVAIE
Sbjct: 939 LLHNRRKEDSVTQELDEYLIDFPPELCELKIIGFSKDIGSSISLLPSIMHRLENLLVAIE 998
Query: 1005 LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDT 1064
LK LLSASF EGAEV+A +L+ALTTE+CQER SLERLEILGDAFLK+AVGRHLFLLHDT
Sbjct: 999 LKSLLSASFSEGAEVTAYRILEALTTERCQERLSLERLEILGDAFLKFAVGRHLFLLHDT 1058
Query: 1065 VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERT 1124
+DEGELTR+RSNAVNNSNLLKLA+R NLQVYIRDQPFDP QFFALG CP IC+KE+E +
Sbjct: 1059 LDEGELTRKRSNAVNNSNLLKLASRRNLQVYIRDQPFDPRQFFALGHPCPVICTKESEGS 1118
Query: 1125 IHSQYDGRAPDDLNA-EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIG 1183
IHS A N EVRCS+GHHWL+KKTIADVVEALVGAFI DSGF+AATAFLKW+G
Sbjct: 1119 IHSSNRSNAKGQENTIEVRCSRGHHWLYKKTIADVVEALVGAFIVDSGFRAATAFLKWLG 1178
Query: 1184 IQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-G 1242
I+V EAS VT +C++S++F+PL+ S+D+++LE L HQF++RGL+LQAFVHPS+N+ G
Sbjct: 1179 IRVNIEASDVTKVCLASRTFMPLAPSIDVSSLEDSLDHQFVNRGLVLQAFVHPSYNKHGG 1238
Query: 1243 GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
GCYQRLEFLGDAVLDYLITSYL+SVYPKLKPG LTDLRS LVNN+AFA VAVD+SF +FL
Sbjct: 1239 GCYQRLEFLGDAVLDYLITSYLFSVYPKLKPGLLTDLRSALVNNRAFAIVAVDRSFNEFL 1298
Query: 1303 IFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
I DS LSE I YV+++ P+ ++ EGP+CPKVLGDLVES +GAI LD+GF+LN +W
Sbjct: 1299 ICDSGNLSEAIETYVNFVKRPAVEKDSLEGPKCPKVLGDLVESCIGAIFLDTGFDLNCIW 1358
Query: 1363 KIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVF 1422
K+MLSFLDPIL SN+ LNP REL E C S+ LQFP+LK+ FL EAKVTG KD+
Sbjct: 1359 KLMLSFLDPILNSSNVLLNPFRELHEFCESHKWKLQFPTLKRDMNFLVEAKVTG--KDIC 1416
Query: 1423 ISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPIN 1482
+ A A N ++KEAIRIAS+Q+ KLK GY+ K+ LE +L+S K++A+LIGYDETPI+
Sbjct: 1417 LDASANNSNKKEAIRIASEQIIVKLKDQGYIRKSNYLEEVLRSGQKTDAKLIGYDETPID 1476
Query: 1483 VVAADDNVFEKLKISEPQGG----------------SSCDIG------SPSLTTGGL--- 1517
+ A D + LKI +P S C I SPS+ GG
Sbjct: 1477 ITAHDPIGLQNLKIQDPSCSDFNPKIRSMSKLTNTCSPCFIAANIQPPSPSVMVGGQPSA 1536
Query: 1518 ----------QNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APE 1566
+ SA+SRL+++CAANCWKPP F+CC EEG SHLK F+++VIVEIE AP+
Sbjct: 1537 TVAYPTSDMDKPTSAKSRLHDICAANCWKPPLFECCYEEGPSHLKSFSYKVIVEIEAAPD 1596
Query: 1567 KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
I+EC G P+ KKK AAEHAAEG LW L+ GYL
Sbjct: 1597 MILECFGAPREKKKAAAEHAAEGALWYLQHVGYL 1630
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 2024 bits (5244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1035/1649 (62%), Positives = 1251/1649 (75%), Gaps = 67/1649 (4%)
Query: 1 MPDGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIAR 60
MPDGES+V +GG + + S + S+++S + KDP++IAR
Sbjct: 1 MPDGESSV---VVAGGQASMEPSLSVSNQLQSLSLS------QDKNHDDSVKKDPRKIAR 51
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
KYQLELCKKAMEENIIVYLGTGCGKTHIAVLL+Y + HLIRKPQK+IC+FLAPTVALV Q
Sbjct: 52 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMYGMGHLIRKPQKNICVFLAPTVALVHQ 111
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QAKVI +S FKV T+CG SKRLK H DWE+EI QYEVLVM PQILL+ L H FI ME+I
Sbjct: 112 QAKVIADSTNFKVGTYCGSSKRLKRHQDWEQEIGQYEVLVMTPQILLHNLSHCFITMEMI 171
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
ALLIFDECHHAQVKSNH YA IMK FYK + KVPRIFGMTASPVVGKGAS++ANL KSI
Sbjct: 172 ALLIFDECHHAQVKSNHAYAVIMKVFYKSNSSKVPRIFGMTASPVVGKGASSEANLAKSI 231
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQY 300
NSLE++LDAKVYSVED E L+SFV++PV+ +Y Y + +S Y+ ++ EIKR Q
Sbjct: 232 NSLEHILDAKVYSVEDKE-LQSFVTTPVINIYHYVSTASGETSLYL----KIEEIKR-QC 285
Query: 301 ISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIE 360
I+ L R + DHQ N K LNR+HD++ F L+NLG+ GAL AS+ILLSGD + R+EL+E
Sbjct: 286 IANLGRSIEDHQKRMNAKKLLNRMHDNVIFGLQNLGIWGALQASHILLSGDRSERHELVE 345
Query: 361 AEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTF 419
AEGN+ DDSLC ++ +QA+E+F + C +DLS +E+LKEPFFS KLLRLIGILS F
Sbjct: 346 AEGNSSDDSLCDKYLAQAAELFTSQCMIGDRVTDLSSVEILKEPFFSAKLLRLIGILSNF 405
Query: 420 RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEK 479
RLQ++MKCI+FVNRIVTAR+LSYILQ LK L WR FLVGV+AGLKSMSR M I++K
Sbjct: 406 RLQKNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVHAGLKSMSRKTMNIIVDK 465
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG
Sbjct: 466 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 525
Query: 540 NQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRY 599
N++ELD+I F K+E RMN EI RTS + + EERI++VDSSGA +S+GY +SLLH+Y
Sbjct: 526 NKKELDIIDGFEKDEYRMNMEITFRTSKETYIIPEERIFRVDSSGASVSSGYSISLLHQY 585
Query: 600 CSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAI 659
CSKLPHDE+F+PKP FYY DD GG CHI LP+NAPI+QI+GTPQ SMEA+K+DACLKAI
Sbjct: 586 CSKLPHDEYFDPKPCFYYLDDSGGISCHITLPSNAPINQILGTPQLSMEASKRDACLKAI 645
Query: 660 EDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS 719
E+L+ LG L+D LLP++D+A + + SSD D E SRGELHEMLVP+ QSW
Sbjct: 646 EELYNLGTLSDCLLPKQDDAEPEAQVSGSSDEDECEDAISRGELHEMLVPSAFGQSWINE 705
Query: 720 QYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG 779
VRLN Y+++F P P DR+Y+EFGLF+ LP EAE L++DLHLA GRSVMTK VP G
Sbjct: 706 DNIVRLNSYYIKFCPYPEDRVYKEFGLFIMVRLPMEAEKLELDLHLAHGRSVMTKFVPFG 765
Query: 780 IMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN 831
+++ A+ FQEMFLK+ILDR EF SEFV LG + +STFYLLLPV+ +
Sbjct: 766 VVEFDKDEIKMAENFQEMFLKIILDRLEFVSEFVDLGMGAESHTGTSTFYLLLPVVLQEY 825
Query: 832 S----VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHK 887
VDWK ++RCL SP+F P ++D+K P LQL NG+ S DVENSLVYA HK
Sbjct: 826 GNAMKVDWKTVKRCLCSPIFRHPADTMDKKVFPLDIHLQLANGYRSVRDVENSLVYAPHK 885
Query: 888 KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH 947
K FY VTN+ ++KNGYSP+ DS +SS+VD+ I + IHLK P+QPLL KP+ L NLLH
Sbjct: 886 KNFYFVTNVNYQKNGYSPHNDSGTSSYVDYFIEKFSIHLKCPEQPLLHVKPVSNLHNLLH 945
Query: 948 NRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH 1007
NRK ED+E EL+EY LPPELC+LKIIGFSKDIGSS+SLLPSIMHRL NLLVAIELKH
Sbjct: 946 NRKHEDAEPQELDEYLIYLPPELCELKIIGFSKDIGSSISLLPSIMHRLGNLLVAIELKH 1005
Query: 1008 LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDE 1067
LS+SFPE AE+SA +L+ALTTEKCQERFSLERLE+LGDAFLK+AV RH FL+HD++ E
Sbjct: 1006 RLSSSFPEAAEISALRVLEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHE 1065
Query: 1068 GELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHS 1127
G+LT+RRSNAVNNSNL KLA + NLQVYI DQ FDP QF+ALGR CPR+CS ET+ +IH
Sbjct: 1066 GDLTKRRSNAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPCPRLCSNETKESIHF 1125
Query: 1128 QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE 1187
+ E +C+K HHWLH+KTIADVVEALVGAF+ DSGFKAA AFL WIGIQV+
Sbjct: 1126 CLNSVKEQGKVTETQCNKNHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVD 1185
Query: 1188 FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQ 1246
FEASQV +ICI+S S+LPLS+ +D+ +LE LGH F H+GLLLQAFVHPS+N+L GGCYQ
Sbjct: 1186 FEASQVVDICIASASYLPLSSEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLGGGCYQ 1245
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGDAVLDYLITSY++S YPKLKPGQLTDLRS+ VNN+AFA +AVD+SF KFL+ DS
Sbjct: 1246 RLEFLGDAVLDYLITSYVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKFLLCDS 1305
Query: 1307 NVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
+ LSE I YVDY+ P S +KEGP+CPK LGDLVES +GAILLDSGFNLN VWKIM
Sbjct: 1306 SGLSEAIKKYVDYIRRPVSDNSIKEGPKCPKALGDLVESCVGAILLDSGFNLNKVWKIMT 1365
Query: 1367 SFLDPILKF-SNLQLNPIRELLELCNSYDLDLQF---PSLKKGGKFLAEAKVTGKDKDVF 1422
SFLD I+KF S+LQL+P+R+L ELC S++++L+F PS K +F EAKV+G V
Sbjct: 1366 SFLDSIMKFSSSLQLSPVRDLRELCQSHNMELEFLPVPS-KLTKRFSVEAKVSG--NGVC 1422
Query: 1423 ISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPIN 1482
+A AT ++KEA RIAS LFSK KA G+ K+K+LE +L+S+ K E +LIGYDETPI+
Sbjct: 1423 ETASATGQNKKEACRIASLLLFSKFKAQGWKAKSKTLEEVLESTSKMEPKLIGYDETPID 1482
Query: 1483 VVAADDNVF---EKLKISEPQ---GGSSCDIGSPSLTTGG--------------LQNR-- 1520
V + ++ + S P+ + +I SP + G +NR
Sbjct: 1483 VTDTNKHIVVNADPYNKSNPEIRPMQETDEICSPCVKPFGQRLQSSAKGKLSQIFENRDC 1542
Query: 1521 --------SARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEK-IIEC 1571
+ARSRLYELCA+ CWKPP+F+CCK EG HLK FT +V +EIE + I+E
Sbjct: 1543 SSDLSGTGTARSRLYELCASYCWKPPSFECCKAEGPDHLKQFTCKVTLEIEEAQNLILEF 1602
Query: 1572 IGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+GEP +KKK AAE AAEG W L+ EGYL
Sbjct: 1603 VGEPLSKKKDAAESAAEGAFWYLQHEGYL 1631
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 2018 bits (5227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1036/1653 (62%), Positives = 1258/1653 (76%), Gaps = 75/1653 (4%)
Query: 1 MPDGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIAR 60
MPDGES S +GG + + S + S+++S V +S KDP++IAR
Sbjct: 1 MPDGES----SAVAGGQVSMEPSLSLSDQLQSLSLSQVKNHDDS------VKKDPRKIAR 50
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
+YQLELCKKAMEENIIVYLGTGCGKTHIAVLL++E+ LIRKPQK+IC+FLAPTVALV Q
Sbjct: 51 RYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMHEMGDLIRKPQKNICVFLAPTVALVHQ 110
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QAKVI +S FKV T+CG SKRLK H DWE+E+ QYEVLVM PQIL + L H FI ME+I
Sbjct: 111 QAKVIADSTDFKVGTYCGSSKRLKHHQDWEQEMGQYEVLVMTPQILHHNLSHCFITMEMI 170
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
ALLIFDECHHAQVKSNH YA IMK FYK + KVPRIFGMTASPVVGKGAS++ANL KSI
Sbjct: 171 ALLIFDECHHAQVKSNHAYAVIMKVFYKSNSTKVPRIFGMTASPVVGKGASSEANLAKSI 230
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQY 300
NSLE++LDAKVYSVED E L+SFV++PV+ +Y Y T+S + ++ EIKR Q
Sbjct: 231 NSLEHILDAKVYSVEDKE-LQSFVTTPVINIYHYV----STASGETSLHLKIEEIKR-QC 284
Query: 301 ISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIE 360
I+ L R + DHQ NT K LNR+HD++ F L+NLG+ GAL AS+ILLSGD + R+EL+E
Sbjct: 285 IATLGRSIEDHQKRMNTKKLLNRMHDNVIFGLQNLGIWGALQASHILLSGDHSERHELVE 344
Query: 361 AEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTF 419
A+GN+ DDSLC ++ +QA+E+F + C + DLS +E+LKEPFFS KLLRLIGILS F
Sbjct: 345 ADGNSSDDSLCDKYLAQAAELFTSQCMIGILTFDLSSVEILKEPFFSAKLLRLIGILSNF 404
Query: 420 RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEK 479
RLQ++MKCI+FVNRIVTAR+LSYILQ LK L WR FLVGV+AGLKSMSR M I++K
Sbjct: 405 RLQKNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVHAGLKSMSRKTMNIIVDK 464
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG
Sbjct: 465 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 524
Query: 540 NQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRY 599
N++E+D+I F ++E RMN E+ RTS + + EERI+++DSSGA +S+GY +SLLH+Y
Sbjct: 525 NKKEIDVIDGFKEDEYRMNMEVTFRTSKETYIIPEERIFRIDSSGASVSSGYSISLLHQY 584
Query: 600 CSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAI 659
CSKLPHDE+F+PKP F+Y DD GG CHI LP+NAPI+QI+GTPQ SMEA+K++ACLKAI
Sbjct: 585 CSKLPHDEYFDPKPSFHYLDDSGGISCHITLPSNAPINQILGTPQLSMEASKREACLKAI 644
Query: 660 EDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS 719
E+L+ LGAL+D LLP++D+A + + SSD D + SRG+LHEMLVP+ QSW
Sbjct: 645 EELYNLGALSDCLLPKQDDAEPEVQVSGSSDEDESDA-ISRGKLHEMLVPSAFGQSWINE 703
Query: 720 QYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG 779
VRLN Y+++F P P DR+Y+EFGLF+ + LP EAE L++DLHLA GRSVMT VP G
Sbjct: 704 DNIVRLNSYYIKFCPYPEDRVYKEFGLFMMTCLPMEAEKLELDLHLAHGRSVMTMFVPFG 763
Query: 780 IMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN 831
+++ A+ FQEMFLK+ILDR EF SEFV LG S +STFYLLLPV+ +
Sbjct: 764 VVEFNKDEIKMAENFQEMFLKIILDRLEFISEFVDLGMSAESHSGTSTFYLLLPVVLQEY 823
Query: 832 S----VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHK 887
VDWKI++RCL SP+F P ++D+K P LQL NG+ S +VENSLVYA HK
Sbjct: 824 GNAMEVDWKIVKRCLCSPIFRHPADTMDKKVFPLDIHLQLANGYRSVRNVENSLVYAPHK 883
Query: 888 KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH 947
K FY VTN+ +EKNGYSP+ DS +SS+VD+ I + IHLK PKQPLL KP+ L NLLH
Sbjct: 884 KNFYFVTNVNYEKNGYSPHNDSGTSSYVDYFIEKFSIHLKCPKQPLLHVKPVSNLHNLLH 943
Query: 948 NRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH 1007
NRK ED+E EL+EY LPPELC+LK+IGFSKDIGSS+SLLPSIMHRL NLLVAIELKH
Sbjct: 944 NRKREDAEPQELDEYLIYLPPELCELKVIGFSKDIGSSISLLPSIMHRLGNLLVAIELKH 1003
Query: 1008 LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDE 1067
+LS+SFPE AE+SA +L+ALTTEKCQERFSLERLE+LGDAFLK+AV RH FL+HD++ E
Sbjct: 1004 MLSSSFPEAAEISAIRVLEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHE 1063
Query: 1068 GELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHS 1127
G+LT+RRSNAVNNSNL KLA + NLQVYI DQ FDP QF+ALGR CPR+CS ETE +IH
Sbjct: 1064 GDLTKRRSNAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPCPRVCSNETEESIHF 1123
Query: 1128 QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE 1187
+ E RCSK HHWLH+KTIADVVEALVGAF+ DSGFKAA AFL WIGIQV+
Sbjct: 1124 CLNSVMQQGKATETRCSKNHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVD 1183
Query: 1188 FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQ 1246
FEASQV +ICI+S S+ PLS+ +D+ +LE LGH F H+GLLLQAFVHPS+N+L GGCYQ
Sbjct: 1184 FEASQVVDICIASASYSPLSSEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLGGGCYQ 1243
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGDAVLDYLITSYL+S YPKLKPGQLTDLRS+ VNN+AFA +AVD+SF FL+ DS
Sbjct: 1244 RLEFLGDAVLDYLITSYLFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDNFLLCDS 1303
Query: 1307 NVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
+ LSE I YVDY+ P S +KEGP+CPK LGDLVES +GAILLDSGFNLN VWKIM
Sbjct: 1304 SGLSEAIKKYVDYVRRPVSDNGIKEGPKCPKALGDLVESCVGAILLDSGFNLNKVWKIMT 1363
Query: 1367 SFLDPILKF-SNLQLNPIRELLELCNSYDLDLQF---PSLKKGGKFLAEAKVTGKDKDVF 1422
SFLDPI+KF S+LQL+P+R+L ELC S++L+L+F PS K +F EAKV+G V
Sbjct: 1364 SFLDPIMKFSSSLQLSPVRDLRELCQSHNLELEFLPVPS-KLTKRFSVEAKVSG--NGVC 1420
Query: 1423 ISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPIN 1482
+A AT ++KEA RIASQ LF K KA G+ K+K+LE +L+S+ K E +LIGYDETPI+
Sbjct: 1421 ETASATGQNKKEACRIASQLLFLKFKAQGWKAKSKTLEEVLESTSKMEPKLIGYDETPID 1480
Query: 1483 VVAADDNVFEKLKI-SEPQGGSS---C------DIGSPSLTTGG--------------LQ 1518
V D N + + + ++P S+ C +I SP + G +
Sbjct: 1481 VT--DTNTAKHIVVNADPYNNSNPEICPMQLTDEICSPCVKPFGQRLQSSAKGKLSQIFE 1538
Query: 1519 NR----------SARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEI-EAPEK 1567
NR +ARSRLYELCAA CWKPP+F+CCK+EG HLK FT +V +EI EA
Sbjct: 1539 NRDCGSDSSGTGTARSRLYELCAAYCWKPPSFECCKKEGPDHLKQFTCKVTLEIEEAQNL 1598
Query: 1568 IIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
I+E +GEP +KKK AAE AAEG LW L+ EG+L
Sbjct: 1599 ILEFVGEPLSKKKDAAESAAEGALWYLQHEGFL 1631
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 1943 bits (5034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1025/1654 (61%), Positives = 1236/1654 (74%), Gaps = 121/1654 (7%)
Query: 1 MPDGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIAR 60
M G T E S S GGT +S++V G G ES G QKT+KDP+++AR
Sbjct: 1 MSGGHVTGEHSSLSVGGTNARVVSSSIV----------GDGEESGSGLQKTEKDPRKMAR 50
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
KYQLELCKKA+EENIIVYLGTGCGKTHIAVLLIYE+ HLIR+PQKS C+FLAPTVALV Q
Sbjct: 51 KYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYEMGHLIRQPQKSACVFLAPTVALVHQ 110
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QAKVIE+S FKV +CG S RLK+H WEKEI+Q EVLVM PQILLY L H FIKM+LI
Sbjct: 111 QAKVIEDSTDFKVGIYCGKSNRLKTHSSWEKEIEQNEVLVMTPQILLYNLSHSFIKMDLI 170
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ------- 233
ALLIFDECHHAQVKS HPYA+IMK FYK + K+PRIFGMTASPVVGK +
Sbjct: 171 ALLIFDECHHAQVKSGHPYAQIMKVFYKNNDGKLPRIFGMTASPVVGKEKYRERVTSLEI 230
Query: 234 -------ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
NLP+SINSLENLLDAKVYSVED E+LE FV+SPV+RVY YGPV N TSSSY
Sbjct: 231 LLHHLIRENLPRSINSLENLLDAKVYSVEDKEELECFVASPVIRVYLYGPVANGTSSSYE 290
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSL---RNTTKQLNRLHDSMKFCLENLGVCGALHA 343
L +KR Q I + +K +QSL R+T + L R+H+++ FCLENLG+ GAL A
Sbjct: 291 AYYNILEGVKR-QCIVEIGKKTDGNQSLESLRSTKRMLIRMHENIIFCLENLGLWGALQA 349
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKE 402
ILLSGD + N LIEAEGNT D S+C R+ +QA+ VFAA C RDG+ S++S +EVLKE
Sbjct: 350 CRILLSGDHSEWNALIEAEGNTSDVSMCDRYLNQATNVFAADCTRDGVTSNVSQVEVLKE 409
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
PFFS+KLLRLI ILS FRLQ MKCIVFVNRIVTAR+LS+ILQNLKFL SW+C FLVGV+
Sbjct: 410 PFFSRKLLRLIEILSNFRLQPDMKCIVFVNRIVTARSLSHILQNLKFLTSWKCDFLVGVH 469
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
+GLKSMSR M ILE+FR+G+LNLL+ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR
Sbjct: 470 SGLKSMSRKTMNVILERFRTGKLNLLLATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 529
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDS 582
GRARMPQSEY FLVDSGNQ+E DLI+ F +E RMN EI DRTS + F EE+IYKV +
Sbjct: 530 GRARMPQSEYVFLVDSGNQKERDLIEKFKIDEARMNIEICDRTSRETFDSIEEKIYKVHA 589
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGT 642
+GA I++G +SLL +YCSKLPHDE+F+PKPKF+YFDD GT+CHIILP+NAP H+IVGT
Sbjct: 590 TGASITSGLSISLLQQYCSKLPHDEYFDPKPKFFYFDDSEGTVCHIILPSNAPTHKIVGT 649
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGE 702
PQSS+E AKKDACLKAIE LHKLGAL+++LLPQ+++ E E L SSDSD+ E + SRGE
Sbjct: 650 PQSSIEVAKKDACLKAIEQLHKLGALSEFLLPQQEDTNELE--LVSSDSDNCEDKDSRGE 707
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
L EMLVPAVL++SWT+ + P+ LN Y+++F P P DRIY++FGLF+K+ LP EA+ + ++
Sbjct: 708 LREMLVPAVLKESWTELEKPIHLNSYYIEFCPVPEDRIYKQFGLFLKAPLPLEADKMSLE 767
Query: 763 LHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCE 814
LHLARGRSVMTKLVPSG I A FQE+FLK ILDRSEF E+VPLGKD +
Sbjct: 768 LHLARGRSVMTKLVPSGLSKFSTDEITHATNFQELFLKAILDRSEFVHEYVPLGKDALSK 827
Query: 815 SSSSTFYLLLPVIFH----KNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNG 870
S TFYLLLPVIFH + +VDW+IIRRCLSSPVF P +VD+ LPS+ LQL NG
Sbjct: 828 -SCPTFYLLLPVIFHVSERRVTVDWEIIRRCLSSPVFKNPANAVDKGILPSNDCLQLANG 886
Query: 871 WSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPK 930
SS DVENSLVY H+K FY +TNIV EKNG SP K S++ SH DHL +
Sbjct: 887 CSSIRDVENSLVYTPHQKKFYFITNIVPEKNGDSPCKGSNTRSHKDHLTT---------- 936
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
+E EL+E+F DL PELC+LKIIGFSKDIGSS+SLLP
Sbjct: 937 -----------------------TELQELDEHFVDLAPELCELKIIGFSKDIGSSISLLP 973
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFL 1050
S+MHRLENLLVAIELK +LSASF EG +V+A +L+ALTTEKCQER SLERLE LGDAFL
Sbjct: 974 SVMHRLENLLVAIELKCILSASFSEGDKVTAHRVLEALTTEKCQERLSLERLETLGDAFL 1033
Query: 1051 KYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG 1110
K+AVGRH FLLHDT+DEGELTR+RSNA V+IRDQPFDP QFFALG
Sbjct: 1034 KFAVGRHFFLLHDTLDEGELTRKRSNA----------------VFIRDQPFDPYQFFALG 1077
Query: 1111 RRCPRICSKETERTIHSQYDGRAPDDL-NAEVRCSKGHHWLHKKTIADVVEALVGAFIDD 1169
CPRIC+KE+E TIHSQ +EVRCSKGHHWLH KT++DVVEAL+GAF+ D
Sbjct: 1078 HPCPRICTKESEGTIHSQCGSHVTGQAKGSEVRCSKGHHWLHNKTVSDVVEALIGAFLVD 1137
Query: 1170 SGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLL 1229
SGFKAA AFL+WIGI+V+F+ SQV NIC +S+++ L+ S+D+ATLE LLGHQFL++GLL
Sbjct: 1138 SGFKAAIAFLRWIGIKVDFDDSQVINICQASRTYAMLNPSMDLATLENLLGHQFLYKGLL 1197
Query: 1230 LQAFVHPSFNRLGGCY--QRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
LQAFVHPS ++ GG + L+F + I YPK+KPG LTDLRS+LVNN+
Sbjct: 1198 LQAFVHPS-HKNGGEFGVMILQFAMTLMFPPEIGVPWRCFYPKMKPGHLTDLRSVLVNNR 1256
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSL 1347
AFA+VAVD+SF+++LI DS+ LS +VD++ TP S R + EGP+CPKVLGDLVESS+
Sbjct: 1257 AFASVAVDRSFHEYLICDSDALSAATKKFVDFVRTPKSERRLLEGPKCPKVLGDLVESSV 1316
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK 1407
GAILLD+GF+LN +WKIMLSFLDPI FSNLQ+NP+REL ELC S++ D + P+ KKG
Sbjct: 1317 GAILLDTGFDLNHIWKIMLSFLDPISSFSNLQINPVRELKELCQSHNWDFEVPASKKGRT 1376
Query: 1408 FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSP 1467
F + ++GKD + ISA A+N ++KEAIR+AS++++++LK G +P T SLE +L++S
Sbjct: 1377 FSVDVTLSGKDMN--ISASASNSNKKEAIRMASEKIYARLKDQGLIPMTNSLEEVLRNSQ 1434
Query: 1468 KSEARLIGYDETPINVVAADDNVFEKLKISEPQG-------GSSCD-----IGSPSLT-- 1513
K EA+LIGYDETPI+ VA D + FE KI EP G SC + + SL+
Sbjct: 1435 KMEAKLIGYDETPID-VALDAHGFENSKIQEPFGINCSYEVRDSCPPRFEAVDAWSLSPL 1493
Query: 1514 --TGGLQNR----SARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEI-EAPE 1566
TGG ++ +ARSRL E+CAAN WKPP+F+CC EEG SHLK FT++V+VEI EAPE
Sbjct: 1494 DFTGGQPSKVDLGTARSRLREICAANSWKPPSFECCTEEGPSHLKSFTYKVVVEIEEAPE 1553
Query: 1567 KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
EC+G PQ KKK AAE AAEG LW L+ + +L
Sbjct: 1554 MSFECVGSPQMKKKAAAEDAAEGALWYLKHQRHL 1587
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 1898 bits (4916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 987/1644 (60%), Positives = 1214/1644 (73%), Gaps = 85/1644 (5%)
Query: 14 SGGGTKICAATSAVVEEC----SVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKK 69
SGGG + A +S E ++V + SSV +K DP++IARKYQ++LCKK
Sbjct: 2 SGGGYENGATSSPSAEPSLITNQLSVLSINDDEHSSVSVEK---DPRKIARKYQMDLCKK 58
Query: 70 AMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI 129
A+EEN++VYLGTG GKTHIAVLLIYE+ HLI+KPQKSIC+FLAPTVALVQQQAKVIEESI
Sbjct: 59 ALEENVVVYLGTGSGKTHIAVLLIYEMGHLIKKPQKSICVFLAPTVALVQQQAKVIEESI 118
Query: 130 GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECH 189
FKV T+CG SK LKSH DWEKE++QYEVLVM PQILL+ L H +I++E IALLIFDECH
Sbjct: 119 DFKVGTYCGKSKHLKSHQDWEKEMEQYEVLVMTPQILLHNLSHCYIRIEFIALLIFDECH 178
Query: 190 HAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
+AQV+S+HPYA+IMK FYKPD++K PRIFGMTASP+ GKGA+ + LE LL +
Sbjct: 179 YAQVESDHPYAEIMKIFYKPDVVKQPRIFGMTASPISGKGAT--------VEGLETLLRS 230
Query: 250 KVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLH 309
KVYSVED ++LE FV+SP V VYQYGP + + +Y S++L EIK Q + L +K
Sbjct: 231 KVYSVEDKDELEQFVASPKVNVYQYGPGSSCHTKAY---SQKLEEIKH-QCVKELHKKAV 286
Query: 310 DHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDS 369
D +LRNT K L RLH + F LENLGV GAL AS ILL GD R++++EAE N DDS
Sbjct: 287 D-STLRNTKKMLKRLHGHLIFSLENLGVLGALQASCILLKGDHHERHQMVEAEVNASDDS 345
Query: 370 LC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCI 428
LC R+ SQ VF + C +DG+ DL+ +EVLKEP+FSKKLLRLIGILS F +Q MKCI
Sbjct: 346 LCDRYLSQVDTVFTSGCAKDGMNPDLALMEVLKEPYFSKKLLRLIGILSNFGVQPDMKCI 405
Query: 429 VFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLL 488
VFVNRIVTAR+LSYILQ+LK L+SW+C FLVGV++GLKSMSR IL+KFRSGELNLL
Sbjct: 406 VFVNRIVTARSLSYILQHLKILSSWKCGFLVGVHSGLKSMSRKNTNIILDKFRSGELNLL 465
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
+ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP+SEYAFLVD GNQRELDLI+
Sbjct: 466 IATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPKSEYAFLVDRGNQRELDLIE 525
Query: 549 NFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF 608
+F++ E +M+ EI R S +E IYKVD +GA +S+ +SLLH YCSKLPHDE+
Sbjct: 526 HFTRSEAQMDDEISSRKSRTMVADFQENIYKVDMTGATVSSALSISLLHHYCSKLPHDEY 585
Query: 609 FNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGAL 668
F PKP+FYYFDD+ GTIC +ILP+NA +H I PQSS+EAAKKDACL+A + LH+LGAL
Sbjct: 586 FCPKPQFYYFDDVDGTICKLILPSNAAMHSIESAPQSSIEAAKKDACLRACKSLHELGAL 645
Query: 669 NDYLLPQEDNATEDEPMLFS-SDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
DYLLP D A ED+ ++ SDS+ EGE +R ELHEM+VPA L++ WT++ PV LN
Sbjct: 646 TDYLLP--DQADEDKDLVPDCSDSECCEGEDAREELHEMIVPASLKEPWTETDNPVCLNS 703
Query: 728 YFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG-------- 779
Y++ F P P DR+Y++FGLF+K+ LP EAE +K+DL+LARGRSV T+L+PSG
Sbjct: 704 YYISFFPFPNDRVYKKFGLFLKAPLPQEAERMKLDLNLARGRSVKTELIPSGTTSFENNE 763
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIF---HKNSVDWK 836
I A++FQ MF K+ILDRSEF SEFV L K D+ +S S FYLLLPV K SVDW+
Sbjct: 764 IQLAEKFQRMFFKIILDRSEFISEFVSLEKKDFVDSGSK-FYLLLPVNLFGHDKISVDWE 822
Query: 837 IIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
++RRCLSSPVFGT + + S LQL NG S DV NSLVY K F+ ++++
Sbjct: 823 LVRRCLSSPVFGTSVCTSNNMS-KFEEQLQLANGSKSVHDVVNSLVYVPCKDAFFFISDV 881
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES 956
V +KN YS YK DS +HV+H ++ +HL +P QPL++AK LF L NLL RK SE
Sbjct: 882 VKDKNAYSMYK--DSKNHVEHYYDTFSVHLLYPDQPLIKAKQLFCLENLL--RKKGYSEL 937
Query: 957 HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
+ EE+F +LPPE+CQLKIIGFSKDIGSSLSLLPSIMHRLE+LLVAIELK LSASFPEG
Sbjct: 938 RDKEEHFVELPPEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEG 997
Query: 1017 AEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
E++ + +L+ALTTE C E FSLERLE+LGDAFLK+AVGRHLFLLHD DEG+LTR+RSN
Sbjct: 998 RELAIDHVLEALTTENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSN 1057
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDD 1136
AVNNSNL +A + NLQ YIRDQ F+P F+ +GR CP C+K+TE+ IH G D
Sbjct: 1058 AVNNSNLYMVAIKKNLQAYIRDQSFEPDHFYVVGRPCPVTCNKQTEKNIHG-LCGSGTDG 1116
Query: 1137 LNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNI 1196
+ EVRCSK HHWL KKTIAD+VEALVGAF+ DSGFKAA AFLKWIGI +F+ Q+ +I
Sbjct: 1117 IKTEVRCSKYHHWLRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIHTDFKEPQLKSI 1176
Query: 1197 CISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAV 1255
C +SK F+PL+ +D+ +E LLG+ F+H+GLL+QAF+HPS+NR GGCYQRLEFLGDAV
Sbjct: 1177 CSASKVFMPLADEIDVLGIERLLGYSFIHKGLLIQAFIHPSYNRHGGGCYQRLEFLGDAV 1236
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
LDYLITSYLYSVYPKLKPGQLTDLRS+ VNN FA VAV QSF+ ++ DS+ L E+I
Sbjct: 1237 LDYLITSYLYSVYPKLKPGQLTDLRSISVNNNTFAVVAVRQSFHSHILCDSSDLRESITR 1296
Query: 1316 YVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF 1375
YV+++ P STR + PK LGDLVES +GAILLD+GF+LN W+I+LSFL P++ F
Sbjct: 1297 YVNFIGRPDSTRGWVKSHLVPKALGDLVESCMGAILLDTGFDLNRAWQIILSFLKPVMSF 1356
Query: 1376 SNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEA 1435
+ LQLNP REL ELC S+ +L+F KK G FL EA+V G ++V +A A N+++K A
Sbjct: 1357 TRLQLNPTRELYELCQSFGWNLKFLPSKKDGNFLVEARVNG--ENVSAAASALNINKKSA 1414
Query: 1436 IRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLK 1495
R+A+Q + S LKA GY PK+KSLE +LK++ K EA+LIGYDETP + D++ +K +
Sbjct: 1415 QRMAAQIVCSSLKAQGYRPKSKSLEQVLKAAIKMEAKLIGYDETPCVLTTICDDL-DKHE 1473
Query: 1496 ISEP-----------QGGSSCDIGSPSL----------------------------TTGG 1516
SE + SC+ S S TGG
Sbjct: 1474 TSESDCHLKVFPVNEELARSCNFKSKSTRKLLSTEASVQCNSDQTIMSNGSKEDAKATGG 1533
Query: 1517 LQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQ 1576
+ SA+SRL+E+CAANCWKPP F+CCKE G SHLK FTFRV+VEIE ++IE GE Q
Sbjct: 1534 SKTESAKSRLHEICAANCWKPPLFECCKETGPSHLKEFTFRVLVEIEETSRVIESYGEAQ 1593
Query: 1577 AKKKGAAEHAAEGMLWCLEREGYL 1600
AKKK AAEHAAEG LW L++EGYL
Sbjct: 1594 AKKKDAAEHAAEGALWFLKQEGYL 1617
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 1890 bits (4896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1002/1659 (60%), Positives = 1227/1659 (73%), Gaps = 73/1659 (4%)
Query: 1 MPDGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIAR 60
MPDGE+ P+ + TS V E + S + ++ + ++KDP++IAR
Sbjct: 1 MPDGETN-----PTTEVSDNFRPTSFVPVERLMGPSLMN-DQDAGSSTRTSEKDPRRIAR 54
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
KYQLELCKKA+EENIIVYLGTGCGKTHIA+LLIYEL+HLIR Q IC+FLAPTVALVQQ
Sbjct: 55 KYQLELCKKALEENIIVYLGTGCGKTHIAILLIYELSHLIRSSQNGICVFLAPTVALVQQ 114
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QAKVIE+S+ FKVR +CGGSK L SH DWE+E+++YEV VM P+I L LYH +IKM+ +
Sbjct: 115 QAKVIEDSLDFKVRVYCGGSKILNSHYDWEREMEEYEVFVMTPEIFLRNLYHCYIKMDCV 174
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
LLIFDECHHAQVKS+H YA+IM+ FYK + K PRIFGMTASPVVGKGA Q NL +SI
Sbjct: 175 ELLIFDECHHAQVKSDHSYAEIMRVFYKANDPKRPRIFGMTASPVVGKGACHQQNLSRSI 234
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQY 300
NSLE LLDAKVYSVE+ E+L +FVSSP+V +Y YGPV N +SSS+++ S +L ++KR +
Sbjct: 235 NSLEKLLDAKVYSVENREELHAFVSSPLVNIYYYGPVANGSSSSFMSYSSRLEDVKR-KC 293
Query: 301 ISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIE 360
I AL + +H+ L T K L R+H+++ FCLE+LGV GAL A ILLSGD + R+ELIE
Sbjct: 294 IVALGQVKSEHEVLLATKKLLFRMHENILFCLESLGVWGALQACKILLSGDNSERSELIE 353
Query: 361 A-EGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILST 418
A E N +DSL R+ +QA+E+FA+ C++DG SD+ +++L++PFFSKKLLRLIGILS+
Sbjct: 354 AAERNPKNDSLSDRYLNQAAEIFASGCKKDGGISDMLNVDILEDPFFSKKLLRLIGILSS 413
Query: 419 FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILE 478
FR Q +MKCI+FVNRIV AR+LSYILQNL FLA W+C FLVGV++ L+SMSR M IL
Sbjct: 414 FRQQLNMKCIIFVNRIVIARSLSYILQNLNFLAYWKCDFLVGVHSKLRSMSRKTMNHILT 473
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KFRSGELNLL+ATKVGEEGLDIQTCCLVIRFDLPETV+SFIQSRGRARMPQSEYAFLVDS
Sbjct: 474 KFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDS 533
Query: 539 GNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHR 598
GN++EL LI F K+E+RMNREI R+S++ F EE IY+V S+GA I++G +SLLH
Sbjct: 534 GNEKELGLINEFRKDENRMNREIYSRSSNETFDSHEESIYRVASTGASITSGRSISLLHE 593
Query: 599 YCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
YCSKLPHD++F+PKP+F Y+DDLGGT+CH+ LP+NAPI QIV QSS +AAKKDACLKA
Sbjct: 594 YCSKLPHDDYFDPKPQFSYYDDLGGTVCHVNLPSNAPIPQIVSRSQSSKDAAKKDACLKA 653
Query: 659 IEDLHKLGALNDYLLPQED--NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW 716
+E+LHKLGAL+DYLLP +A E E L SSDSDS E E SR ELHEM+ PA L++SW
Sbjct: 654 VEELHKLGALSDYLLPMRGRGSANEQESGLNSSDSDSSEDETSRRELHEMIFPAALKESW 713
Query: 717 TKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLV 776
T S Y V L Y ++ PDP DR Y+EFGLFVK+ LP EAE + ++LHLARGRSVM L+
Sbjct: 714 TGSGYLV-LYCYHIKCTPDPRDRNYKEFGLFVKAPLPQEAERMGLELHLARGRSVMVNLI 772
Query: 777 PSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIF 828
PSG I QA+ FQEMFLKVILDR EF E++PL + S S+ YLLLP+IF
Sbjct: 773 PSGVVELLEEEITQAESFQEMFLKVILDRLEFVQEYIPLRNN--ASRSVSSSYLLLPMIF 830
Query: 829 HKNS----VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYA 884
H N +DW +IRRCLSS +F + + + S L L++G SD+ENSLVY
Sbjct: 831 HDNEGSLFIDWNVIRRCLSSKIFQNDACLIVKGTASSDTHLMLYDGHRRSSDIENSLVYV 890
Query: 885 THKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRN 944
+K F+ VTNI KNG+S YK+S SSH +HL + +GIHL +P+QPLLRAKPLF L N
Sbjct: 891 PYKGEFFFVTNIERGKNGHSQYKNSGFSSHFEHLKTKFGIHLNYPEQPLLRAKPLFLLHN 950
Query: 945 LLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
LHNRK EDSE+ LEEYF +LPPE+CQLKIIGFSKDIGSS+SLLPSIMHRLENLLVAIE
Sbjct: 951 WLHNRKREDSEARHLEEYFIELPPEVCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIE 1010
Query: 1005 LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDT 1064
LK L+A+FP GAEV+A +L+ALTTEKCQER SLERLEILGD+FLK+AV R+LFL HD
Sbjct: 1011 LKCRLAAAFPAGAEVTANRILEALTTEKCQERISLERLEILGDSFLKFAVARYLFLTHDK 1070
Query: 1065 VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERT 1124
DEGELTRRRS V N NLLKLA R NLQVYIRDQPF+P QF+ LGR CPRIC++ET +
Sbjct: 1071 FDEGELTRRRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETSKD 1130
Query: 1125 IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
IHS D N E +CSKGHHWL KKTI+DVVEALVGAF+ DSGFKAA AFLKWIGI
Sbjct: 1131 IHSHDDATNNAKAN-ETKCSKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGI 1189
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG- 1243
QVEFEAS VT+ ++S +++ L+ S+D++ L+ LGH+FLH+GLLLQA VHPS+++ GG
Sbjct: 1190 QVEFEASLVTDALMASNAYVLLADSIDISALQNSLGHRFLHKGLLLQALVHPSYHKHGGG 1249
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
CYQRLEFLGDAVLDYLITSYLYS YPKLKPGQLTDLRS+ V N+AFANVAVD+ FYKFL+
Sbjct: 1250 CYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKFLL 1309
Query: 1304 FDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWK 1363
DS L I +YV ++ P R+ E PRCPK LGDLVESS+GA+L+D+GF++N VWK
Sbjct: 1310 CDSTSLLSDIKSYVHFIKAPPFERDSLEQPRCPKALGDLVESSVGAVLVDTGFDMNCVWK 1369
Query: 1364 IMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFI 1423
IMLSF+DPI+ FS QL+PIR++ E C + L+F S K G + +A+V G +
Sbjct: 1370 IMLSFIDPIMSFSGFQLSPIRDITEFCQNCGWKLKFNSSKMEGYYSVKAEVKGGN--FHA 1427
Query: 1424 SACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV 1483
+A A N +K+A +IA+ + +KLKA G++P+ SLE ILKSS K E +LIGYDETP
Sbjct: 1428 TASAANRRKKDAAKIAANLILTKLKAKGFIPEVNSLEEILKSSKKMEPKLIGYDETPSIT 1487
Query: 1484 VAADDNVFEKLKI-------SEPQGGSSCDIGSP------------SLTTGGLQ------ 1518
+ DN L + S+P+ D P S T G Q
Sbjct: 1488 IDQVDNGHRTLNVLEFSSEHSDPRMHCVVDNSEPVRITRISKMLVSSSRTAGEQLKPAFE 1547
Query: 1519 -----------------NRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVE 1561
+ARSRLYE+CAAN W P+FDC EEG SHLK+FT++V++E
Sbjct: 1548 GHDSPTDLQVISVGRSGKTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKVVLE 1607
Query: 1562 I-EAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGY 1599
I EAP+ I E G P KKK AAEHAAE LW LE+ GY
Sbjct: 1608 IEEAPDTIFEFFGAPHLKKKAAAEHAAEAALWYLEKGGY 1646
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 1887 bits (4887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 990/1644 (60%), Positives = 1222/1644 (74%), Gaps = 79/1644 (4%)
Query: 10 GSQPSGGGTKICAATSAVVEECS-VAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCK 68
G +G + AATS + E+ S +++SG +S V QK +KDP++IARKYQ++LCK
Sbjct: 4 GDFENGTESPPSAATSPITEQLSALSLSG---DIDSPVSVQKPEKDPRKIARKYQMDLCK 60
Query: 69 KAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEES 128
KA+EEN++VYLGTGCGKTHIAVLLIYE+ LIRKPQKSIC+FLAPTVALVQQQAKVIE+S
Sbjct: 61 KALEENVVVYLGTGCGKTHIAVLLIYEMGQLIRKPQKSICVFLAPTVALVQQQAKVIEDS 120
Query: 129 IGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDEC 188
I FKV T+CG SK LKSH DWEKE++QYEVLVM PQILL+ L H +I++E IALLIFDEC
Sbjct: 121 IDFKVGTYCGKSKHLKSHEDWEKEMEQYEVLVMTPQILLHNLSHCYIRIEFIALLIFDEC 180
Query: 189 HHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLD 248
H+AQV+S+HPYA+IMK FYKPD++K+PRIFGMTASP+ GKGA+ + LE LL
Sbjct: 181 HYAQVESDHPYAEIMKIFYKPDVVKLPRIFGMTASPISGKGAT--------VEGLETLLR 232
Query: 249 AKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKL 308
+KVYSVED ++LE FV+SP V VY YGP + +Y S++L EIK Q + L +K
Sbjct: 233 SKVYSVEDKDELEQFVASPKVNVYYYGPGTACLTKAY---SQKLEEIKH-QCVMVLHKKA 288
Query: 309 HDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDD 368
DH +LRNT K L RLH + F LENLGV GAL AS ILL GD R++++EA+ N DD
Sbjct: 289 VDHSTLRNTKKMLKRLHGHLIFSLENLGVFGALQASCILLKGDHYERHQMVEADVNASDD 348
Query: 369 SLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKC 427
SLC R+ SQ + VF + C +DG+ DL+ +EVLKEP+FSKKLLRLIGILS F +Q MKC
Sbjct: 349 SLCDRYLSQVATVFTSGCAKDGMNPDLTRVEVLKEPYFSKKLLRLIGILSNFGVQPDMKC 408
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNL 487
I+FVNRIVTAR+LSY+LQ+LK L+SW+C FLVGV++GLKSMSR IL KFRSGELNL
Sbjct: 409 IIFVNRIVTARSLSYMLQHLKVLSSWKCGFLVGVHSGLKSMSRKNTNIILNKFRSGELNL 468
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLI 547
LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP+SEYAFLVDS NQREL+LI
Sbjct: 469 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPKSEYAFLVDSDNQRELNLI 528
Query: 548 KNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDE 607
++FS+ E RMN EI R S A +E IYKVD +GA IS+ +SLLH YCSKLP DE
Sbjct: 529 EHFSRNEARMNDEISSRKSCTAVIDFQENIYKVDMTGATISSASSISLLHHYCSKLPRDE 588
Query: 608 FFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
FF PKP+F+YFDD+ GTIC ++LP+NAP+HQIV PQSS+EAAKKDACL+A + LH+LGA
Sbjct: 589 FFCPKPQFFYFDDIDGTICKLVLPSNAPMHQIVSAPQSSIEAAKKDACLRACKSLHELGA 648
Query: 668 LNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
L DYLLP D A ED +F + + E +R ELHEM+VPA ++SWT+++ PV LN
Sbjct: 649 LTDYLLP--DQADEDLIHVFLTQKAQMD-EDAREELHEMIVPAAFKESWTETESPVCLNS 705
Query: 728 YFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG-------- 779
Y++ F P P DR+Y++FGLF+K+ LP EAE +K+DL+LARGRSV T+L+PSG
Sbjct: 706 YYINFSPCPIDRVYKKFGLFLKAPLPQEAERMKLDLNLARGRSVETELIPSGATNFENNE 765
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIF---HKNSVDWK 836
+ A++FQ MFLK+ILDRSE SEFV L K+DY +S+S + YLLLPV +K SVDW+
Sbjct: 766 VQLAEKFQRMFLKIILDRSEXISEFVSLEKEDYVDSASKS-YLLLPVNLCGHNKISVDWE 824
Query: 837 IIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
++RRCLSSP+FGT + + + LQL NG S DV NSLVY K+ F+ ++++
Sbjct: 825 LVRRCLSSPIFGTKVYAGNSEISKFDEQLQLANGSKSVHDVANSLVYVPCKETFFFISDV 884
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES 956
V E N YS YK DS +HV+H ++GI L +P+QPL++AK LF L NLL RK SE
Sbjct: 885 VKESNAYSIYK--DSKNHVEHYYDTFGIRLSYPEQPLIKAKQLFCLDNLL--RKKGYSEL 940
Query: 957 HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
+ EE+F +LP E+CQLKIIGFSKDIGSSLSLLPSIMHRLE+LLVAIELK LSASFPEG
Sbjct: 941 RDKEEHFVELPAEICQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEG 1000
Query: 1017 AEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
EV+ + +L+ALTTEKC E FSLERLE+LGDAFLK+AVGRH+FL ++ DEG+LTRRRSN
Sbjct: 1001 REVTIDHVLEALTTEKCNEPFSLERLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTRRRSN 1060
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDD 1136
VNNS L +A RNNLQ +IRDQ FDP F+A+GR CP IC+K+TE++IH Q G D
Sbjct: 1061 IVNNSYLYTIAVRNNLQAFIRDQSFDPYHFYAVGRPCPVICNKQTEKSIHGQC-GSVTDG 1119
Query: 1137 LNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNI 1196
EVRCSK H WL KKTIAD+VEALVGAF+ DSGFKAA AFLKWIGI +FE SQV +I
Sbjct: 1120 AKTEVRCSKCHQWLRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIYTDFEESQVKSI 1179
Query: 1197 CISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAV 1255
C +SK F+PL+ +D+ +E LLG+ F+H+GLL+QAF+HPS+N GGCYQRLEFLGDAV
Sbjct: 1180 CAASKVFMPLADEIDIQAIENLLGYTFVHKGLLIQAFIHPSYNNHGGGCYQRLEFLGDAV 1239
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
LDYLITSYLYSVYPKLKPGQLTDLRS+ VNN FA VAV QSF+ ++ DS+ L E+I
Sbjct: 1240 LDYLITSYLYSVYPKLKPGQLTDLRSVSVNNTTFAVVAVHQSFHSHILCDSSGLRESITR 1299
Query: 1316 YVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF 1375
YV+++ P S + + E P CPK LGDLVES +GAILLD+GF+LN W+IMLSFL P++ F
Sbjct: 1300 YVNFIGRPDSMKRLSEEPSCPKALGDLVESCMGAILLDTGFDLNXAWRIMLSFLKPVMSF 1359
Query: 1376 SNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEA 1435
+ LQLNP REL ELC SY L+F + KK K+L EAKV G ++V +A A N+++K A
Sbjct: 1360 TRLQLNPKRELHELCQSYGWHLKFLASKKDSKYLVEAKVNG--ENVSEAASALNINKKAA 1417
Query: 1436 IRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLK 1495
R+A+QQ+ S LKA GY K+KSLE ++K++ K EA+LIGYDE P V+ A N EK +
Sbjct: 1418 ARMAAQQVHSSLKAQGYRRKSKSLEQVVKTAKKMEAKLIGYDEIPC-VLTAKCNDVEKNE 1476
Query: 1496 ISE-----------------------------PQGGSSCD---------IGSPSLTTGGL 1517
SE P+ C+ S S TGG
Sbjct: 1477 ASESDRDLKVFPISEELARNCNFKLKACEKVGPKAAVQCNSEQTIMPNGSNSDSKATGGA 1536
Query: 1518 QNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQA 1577
N SA+S L+E+CAANCWKPP F+CCKE G SHLK FTFRV+VEIE ++IE G P+A
Sbjct: 1537 INGSAKSILHEVCAANCWKPPRFECCKETGPSHLKEFTFRVVVEIEETSRVIESCGAPRA 1596
Query: 1578 KKKGAAEHAAEGMLWCLEREGYLY 1601
KKK AAE AAEG LW L+ EGY++
Sbjct: 1597 KKKDAAEDAAEGALWFLKHEGYMF 1620
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 1758 bits (4553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 906/1595 (56%), Positives = 1137/1595 (71%), Gaps = 51/1595 (3%)
Query: 48 AQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI 107
+ K +KDP++IAR+YQ+ELCKKAMEENIIVYLGTGCGKTHIAV++IYEL HL+ P+KS+
Sbjct: 108 SSKMEKDPRKIARRYQVELCKKAMEENIIVYLGTGCGKTHIAVMVIYELGHLVLSPKKSV 167
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILL 167
CIFLAPTVALV+QQAKVI +S+ FKV CGG + +KSH +WE+EI + EVLVM PQILL
Sbjct: 168 CIFLAPTVALVEQQAKVIADSVNFKVAVHCGGKRIVKSHSEWEREISENEVLVMTPQILL 227
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
+ L H FI+ME I+LLIFDECHHAQ +SNHPYA+IMK FYK + ++ PRIFGMTASPVVG
Sbjct: 228 HNLQHCFIRMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPRIFGMTASPVVG 287
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
KG+ NL KSINSLENLLDAKVYSVE L+ FVSSP+V+VY Y I+D S S +
Sbjct: 288 KGSFQSENLSKSINSLENLLDAKVYSVESNVQLDGFVSSPIVKVYYYQSAISDASQSTIR 347
Query: 288 CSEQLAEIKREQYIS-ALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
L +IK+ S L H Q+L N + L + HD++ + L NLG+ GA+ A+ I
Sbjct: 348 YENMLEDIKQRCLTSIKLQIDTHQTQTLLNMKRLLKKTHDNLIYSLVNLGLWGAIQAAKI 407
Query: 347 LLSGDETMRNELIEAEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ D E G +C + S A+EV ++ +D AS+L + LKEP F
Sbjct: 408 QLNSDVQE-----EPVGENPKSKICDTYLSLAAEVLSSGVAKDESASELLSLAALKEPLF 462
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
S+KL++LI ILS FRL+ HMKCI+FVNRIVTAR LS IL NL+ L SW+ FLVG+++GL
Sbjct: 463 SRKLVQLIEILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGL 522
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
KSMSR M++IL++F+S ELNLLVATKVGEEGLDIQTCCLVIR+DLPETV SFIQSRGRA
Sbjct: 523 KSMSRRGMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRA 582
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGA 585
RMPQSEYAFLVDSGN++E+DLI+NF EDRMN+EI RTS + +E +YKV +GA
Sbjct: 583 RMPQSEYAFLVDSGNEKEMDLIENFRVNEDRMNQEITSRTSEETCPILDEELYKVHETGA 642
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTICHIILPANAPIHQIVGTP 643
CIS G +SLL++YCS+LPHDEFF PKP+F + ++ GGTIC I LPANAPI +IV +
Sbjct: 643 CISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVNEFGGTICRITLPANAPISEIVSSL 702
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG-SRGE 702
S EAAKKDACLKA+ +LH LG LND+LLP + EDE D D+ +GEG SRGE
Sbjct: 703 LPSTEAAKKDACLKAVYELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGE 762
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
L+EM+VP + +Q W S+ V L+ Y+++F+P PADR Y++FG F+KS LP EA+ + +D
Sbjct: 763 LYEMVVPVLFKQKWDSSRSCVNLHSYYIRFVPHPADRSYKKFGFFMKSPLPIEADTMDID 822
Query: 763 LHLARGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCE 814
LHLA RSV K+ PSG+ + A+ FQE+ LKV+ +R E EFVPL D
Sbjct: 823 LHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEVALKVLFERGELIPEFVPLELQDSSR 882
Query: 815 SSSSTFYLLLPVIFHKN----SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNG 870
+S STFYLLLP+ H SVDW IR CLSSP+F TP V+ P+ L L NG
Sbjct: 883 TSKSTFYLLLPISLHDAESVISVDWVTIRSCLSSPIFKTPSVLVEDIVPPTGSYLNLANG 942
Query: 871 WSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPK 930
+ DV+NSLV+ TH K FY V +I + +NG+SP K+S + SH++++ YG+ LK+P
Sbjct: 943 CWNIDDVKNSLVFMTHNKQFYFVADICYGRNGFSPVKESSTKSHMENIYKLYGVELKYPG 1002
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QPLLR KPL +RNLLHNR ++ E EL+EYF ++PPEL QLKI G SK+IGSSLSLLP
Sbjct: 1003 QPLLRVKPLCHVRNLLHNRMQKNLEPQELDEYFIEIPPELSQLKIKGLSKEIGSSLSLLP 1062
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFL 1050
SIMHR+ENLLVAIELKH++SAS PE AEVS +L+ALTTEKC ER SLERLE+LGDAFL
Sbjct: 1063 SIMHRVENLLVAIELKHVMSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFL 1122
Query: 1051 KYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG 1110
K+AV RHLFL HD +DEGELTRRRS AVNNSNL +LA + NLQVYIRDQ DP QFFA G
Sbjct: 1123 KFAVSRHLFLHHDRLDEGELTRRRSKAVNNSNLCRLAIKRNLQVYIRDQALDPTQFFAFG 1182
Query: 1111 RRCPRICSKETERTIHSQYDGRAPDDL--NAEVRCSKGHHWLHKKTIADVVEALVGAFID 1168
C C + T +HS R P L N+E+RCSKGHHWL+KKTIADVVEALVGAF+
Sbjct: 1183 HPCRVTCDEVTSEEVHSL--NRVPGLLESNSEIRCSKGHHWLYKKTIADVVEALVGAFLV 1240
Query: 1169 DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGL 1228
DSGFK A FL WIG+ V+FE+ QV + CI+S+ ++PL+ ++ LE L + FLH+GL
Sbjct: 1241 DSGFKGAVKFLSWIGVNVDFESLQVQDACIASRRYMPLTTRNNLEALENQLDYNFLHKGL 1300
Query: 1229 LLQAFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
L+QAF+HPS+NR GGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPGQLTDLRS+ VNN+
Sbjct: 1301 LVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNK 1360
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSL 1347
A ANVAV S +FL +S L E I +Y ++ EGPRCPKVLGDLVES L
Sbjct: 1361 ALANVAVSFSLKRFLFCESVYLHEAIEDYTNFRAASPLASGPSEGPRCPKVLGDLVESCL 1420
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK 1407
GA+ LD GFNLN VW +MLSFLDP+ SNLQ++PI+EL+ELC SY D + + KK G
Sbjct: 1421 GALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGG 1480
Query: 1408 FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSP 1467
F E KVT K + +SA N ++E+ + A+Q + + LKA + + LE +LK+S
Sbjct: 1481 FSVELKVTKKGCCLTVSATGRN--KRESTKKAAQLMITSLKAHEQITTSHPLEDVLKNSN 1538
Query: 1468 KSEARLIGYDETPINVVAADDNVFEKLKISE------------------PQGGSSCDIGS 1509
+EA+LIGY+E PI+VV E LKI E PQ S +
Sbjct: 1539 LNEAKLIGYNEDPIDVVNLVGLDVENLKIQENLGENSEISSSYVIRRGLPQAPSKTEDRL 1598
Query: 1510 PSLT---TGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-AP 1565
P T G +++A+S L+E C ANCWKPP F+CC+EEG HLK F ++VI+E+E AP
Sbjct: 1599 PQKTIIEAGRPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFFYKVILEVEDAP 1658
Query: 1566 EKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+EC GE +A KKGAAEHAA+ +WCL+ G+L
Sbjct: 1659 NMTLECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1693
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 1754 bits (4544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1592 (56%), Positives = 1134/1592 (71%), Gaps = 46/1592 (2%)
Query: 50 KTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICI 109
K +KDP++IAR+YQ+ELCKKA EEN+IVYLGTGCGKTHIAV+LIYEL HL+ P+KS+CI
Sbjct: 115 KMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPKKSVCI 174
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
FLAPTVALV+QQAKVI +S+ FKV CGG + +KSH +WE+EI EVLVM PQILL+
Sbjct: 175 FLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAANEVLVMTPQILLHN 234
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H FIKME I+LLIFDECHHAQ +SNHPYA+IMK FYK + ++ PRIFGMTASPVVGKG
Sbjct: 235 LQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPRIFGMTASPVVGKG 294
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ NL KSINSLENLL+AKVYSVE L+ FVSSP+V+VY Y ++D S S +
Sbjct: 295 SFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDASQSTIRYE 354
Query: 290 EQLAEIKREQYIS-ALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
L +IK+ S L H Q+L + + L R HD++ + L NLG+ GA+ A+ I L
Sbjct: 355 NMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQL 414
Query: 349 SGDETMRNELIEAEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSK 407
+ D +++E + G +C + S A+E ++ +D ASDL + LKEP FS+
Sbjct: 415 NSDHNVQDEPV---GKNPKSKICDTYLSMAAEALSSGVAKDENASDLLSLAALKEPLFSR 471
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
KL++LI ILS FRL+ HMKCI+FVNRIVTAR LS IL NL+ L SW+ FLVG+++GLKS
Sbjct: 472 KLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKS 531
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
MSR +M++IL++F+S ELNLLVATKVGEEGLDIQTCCLVIR+DLPETV SFIQSRGRARM
Sbjct: 532 MSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARM 591
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACI 587
PQSEYAFLVDSGN++E+DLI+NF EDRMN EI R+S + +E +YKV +GACI
Sbjct: 592 PQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLDEELYKVHETGACI 651
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTICHIILPANAPIHQIVGTPQS 645
S G +SLL++YCS+LPHDEFF PKP+F + D+ GGTIC I LPANAPI +I +
Sbjct: 652 SGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLP 711
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG-SRGELH 704
S EAAKKDACLKA+ +LH LG LND+LLP + EDE D D+ +GEG SRG+L+
Sbjct: 712 STEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLY 771
Query: 705 EMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLH 764
EM VP + +Q W S V L+ Y++ F+P PADRIY++FG F+KS LP EAE + +DLH
Sbjct: 772 EMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKSPLPVEAETMDIDLH 831
Query: 765 LARGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESS 816
LA RSV K+ PSG+ + A+ FQE+ LKV+ +R E +FVPL D +S
Sbjct: 832 LAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIPDFVPLELQDSSRTS 891
Query: 817 SSTFYLLLPVIFHKN----SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS 872
STFYLLLP+ H SVDW IR CLSSP+F TP V+ PS L+L NG
Sbjct: 892 KSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIFPPSGSHLKLANGCW 951
Query: 873 SESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQP 932
+ DV+NSLV+ T+ K FY V +I +NG+SP K+S + SHV+ + YG+ LKHP QP
Sbjct: 952 NIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESIYKLYGVELKHPAQP 1011
Query: 933 LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
LLR KPL +RNLLHNR + E EL+EYF ++PPEL LKI G SKDIGSSLSLLPSI
Sbjct: 1012 LLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPSI 1071
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKY 1052
MHR+ENLLVAIELKH+LSAS PE AEVS +L+ALTTEKC ER SLERLE+LGDAFLK+
Sbjct: 1072 MHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKF 1131
Query: 1053 AVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRR 1112
AV RHLFL HD++DEGELTRRRSN VNNSNL +LA + NLQVYIRDQ DP QFFA G
Sbjct: 1132 AVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGHP 1191
Query: 1113 CPRICSKETERTIHS-QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
C C + + +HS D + E+RCSKGHHWL+KKTIADVVEALVGAF+ DSG
Sbjct: 1192 CRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSG 1251
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
FK A FLKWIG+ V+FE+ QV + CI+S+ +LPL+ ++ TLE L ++FLH+GLL+Q
Sbjct: 1252 FKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQ 1311
Query: 1232 AFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
AF+HPS+NR GGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPGQLTDLRS+ VNN+A A
Sbjct: 1312 AFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALA 1371
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAI 1350
NVAV S +FL +S L E I +Y +++ + EGPRCPKVLGDLVES LGA+
Sbjct: 1372 NVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKVLGDLVESCLGAL 1431
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLA 1410
LD GFNLN VW +MLSFLDP+ SNLQ++PI+EL+ELC SY D + + KK G F
Sbjct: 1432 FLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGAFTV 1491
Query: 1411 EAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSE 1470
E KVT + +SA N ++E + A+Q + + LKA + + LE +LK+ ++E
Sbjct: 1492 ELKVTKNGCCLTVSATGRN--KREGTKKAAQLMITNLKAHENITTSHPLEDVLKNGIRNE 1549
Query: 1471 ARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGS----------PSLT------- 1513
A+LIGY+E PI+VV E L I E GG+S S PS T
Sbjct: 1550 AKLIGYNEDPIDVVDLVGLDVENLNILETFGGNSERSSSYVIRRGLPQAPSKTEDRLPQK 1609
Query: 1514 ----TGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKI 1568
GG +++A+S L+E C ANCWKPP F+CC+EEG HLK F ++VI+E+E AP
Sbjct: 1610 AIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMT 1669
Query: 1569 IECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+EC GE +A KKGAAEHAA+ +WCL+ G+L
Sbjct: 1670 LECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1701
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 1726 bits (4471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1592 (56%), Positives = 1123/1592 (70%), Gaps = 60/1592 (3%)
Query: 50 KTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICI 109
K +KDP++IAR+YQ+ELCKKA EEN+IVYLGTGCGKTHIAV+LIYEL HL+ P+KS+CI
Sbjct: 115 KMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPKKSVCI 174
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
FLAPTVALV+QQAKVI +S+ FKV CGG + +KSH +WE+EI E
Sbjct: 175 FLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAANE------------ 222
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
H FIKME I+LLIFDECHHAQ +SNHPYA+IMK FYK + ++ PRIFGMTASPVVGKG
Sbjct: 223 --HCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPRIFGMTASPVVGKG 280
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ NL KSINSLENLL+AKVYSVE L+ FVSSP+V+VY Y ++D S S +
Sbjct: 281 SFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDASQSTIRYE 340
Query: 290 EQLAEIKREQYIS-ALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
L +IK+ S L H Q+L + + L R HD++ + L NLG+ GA+ A+ I L
Sbjct: 341 NMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQL 400
Query: 349 SGDETMRNELIEAEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSK 407
+ D +++E + G +C + S A+E ++ +D ASDL + LKEP FS+
Sbjct: 401 NSDHNVQDEPV---GKNPKSKICDTYLSMAAEALSSGVAKDENASDLLSLAALKEPLFSR 457
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
KL++LI ILS FRL+ HMKCI+FVNRIVTAR LS IL NL+ L SW+ FLVG+++GLKS
Sbjct: 458 KLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKS 517
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
MSR +M++IL++F+S ELNLLVATKVGEEGLDIQTCCLVIR+DLPETV SFIQSRGRARM
Sbjct: 518 MSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARM 577
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACI 587
PQSEYAFLVDSGN++E+DLI+NF EDRMN EI R+S + +E +YKV +GACI
Sbjct: 578 PQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLDEELYKVHETGACI 637
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTICHIILPANAPIHQIVGTPQS 645
S G +SLL++YCS+LPHDEFF PKP+F + D+ GGTIC I LPANAPI +I +
Sbjct: 638 SGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLP 697
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG-SRGELH 704
S EAAKKDACLKA+ +LH LG LND+LLP + EDE D D+ +GEG SRG+L+
Sbjct: 698 STEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLY 757
Query: 705 EMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLH 764
EM VP + +Q W S V L+ Y++ F+P PADRIY++FG F+KS LP EAE + +DLH
Sbjct: 758 EMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKSPLPVEAETMDIDLH 817
Query: 765 LARGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESS 816
LA RSV K+ PSG+ + A+ FQE+ LKV+ +R E +FVPL D +S
Sbjct: 818 LAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIPDFVPLELQDSSRTS 877
Query: 817 SSTFYLLLPVIFHKN----SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS 872
STFYLLLP+ H SVDW IR CLSSP+F TP V+ PS L+L NG
Sbjct: 878 KSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIFPPSGSHLKLANGCW 937
Query: 873 SESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQP 932
+ DV+NSLV+ T+ K FY V +I +NG+SP K+S + SHV+ + YG+ LKHP QP
Sbjct: 938 NIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESIYKLYGVELKHPAQP 997
Query: 933 LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
LLR KPL +RNLLHNR + E EL+EYF ++PPEL LKI G SKDIGSSLSLLPSI
Sbjct: 998 LLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPSI 1057
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKY 1052
MHR+ENLLVAIELKH+LSAS PE AEVS +L+ALTTEKC ER SLERLE+LGDAFLK+
Sbjct: 1058 MHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKF 1117
Query: 1053 AVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRR 1112
AV RHLFL HD++DEGELTRRRSN VNNSNL +LA + NLQVYIRDQ DP QFFA G
Sbjct: 1118 AVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGHP 1177
Query: 1113 CPRICSKETERTIHS-QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
C C + + +HS D + E+RCSKGHHWL+KKTIADVVEALVGAF+ DSG
Sbjct: 1178 CRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSG 1237
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
FK A FLKWIG+ V+FE+ QV + CI+S+ +LPL+ ++ TLE L ++FLH+GLL+Q
Sbjct: 1238 FKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQ 1297
Query: 1232 AFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
AF+HPS+NR GGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPGQLTDLRS+ VNN+A A
Sbjct: 1298 AFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALA 1357
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAI 1350
NVAV S +FL +S L E I +Y +++ + EGPRCPKVLGDLVES LGA+
Sbjct: 1358 NVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKVLGDLVESCLGAL 1417
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLA 1410
LD GFNLN VW +MLSFLDP+ SNLQ++PI+EL+ELC SY D + + KK G F
Sbjct: 1418 FLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGAFTV 1477
Query: 1411 EAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSE 1470
E KVT + +SA N ++E + A+Q + + LKA + + LE +LK+ ++E
Sbjct: 1478 ELKVTKNGCCLTVSATGRN--KREGTKKAAQLMITNLKAHENITTSHPLEDVLKNGIRNE 1535
Query: 1471 ARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGS----------PSLT------- 1513
A+LIGY+E PI+VV E L I E GG+S S PS T
Sbjct: 1536 AKLIGYNEDPIDVVDLVGLDVENLNILETFGGNSERSSSYVIRRGLPQAPSKTEDRLPQK 1595
Query: 1514 ----TGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKI 1568
GG +++A+S L+E C ANCWKPP F+CC+EEG HLK F ++VI+E+E AP
Sbjct: 1596 AIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMT 1655
Query: 1569 IECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+EC GE +A KKGAAEHAA+ +WCL+ G+L
Sbjct: 1656 LECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1687
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 1502 bits (3889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 826/1636 (50%), Positives = 1079/1636 (65%), Gaps = 95/1636 (5%)
Query: 42 AESSVGAQKTD--KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL 99
E+S A T+ KDP+ IARKYQL+LCK+A+EENI+VYLGTGCGKTHIAVLLIYEL HL
Sbjct: 2 GETSAAAASTEEPKDPRTIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLIYELGHL 61
Query: 100 IRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVL 159
IRKP +CIFLAPT+ LV+QQA VI S FKV+++ G K + H DWEKE+ + EVL
Sbjct: 62 IRKPSSDVCIFLAPTIPLVRQQAAVISNSTNFKVQSYYGNGKSSRDHQDWEKEMRESEVL 121
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFG 219
VM PQILLY L H FI+M IALLIFDECHHAQ HPYA+IMK+FY + +K PR+FG
Sbjct: 122 VMTPQILLYNLRHCFIRMSSIALLIFDECHHAQAHKRHPYAQIMKEFYDSNAVKPPRVFG 181
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV+GKG S + N K INSLE LL AKV SV++ E LES ++ P + VY YGPV +
Sbjct: 182 MTASPVMGKGGSNKLNYTKCINSLEELLHAKVCSVDNVE-LESVIAFPDMEVYPYGPVSH 240
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
S+ VT ++L ++K Q + L+D + + K L RLH ++ FCL+ LG G
Sbjct: 241 --SNLTVTYIKELDDLKL-QSECIVRESLYDFKDSQKKLKSLWRLHGNLIFCLQELGSFG 297
Query: 340 ALHASYILLSGD-ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR-RDGIASDLSCI 397
AL A+ LLS D + + ++ GN+ + + ++A V + C DG D +
Sbjct: 298 ALQAARNLLSFDVDAFDKKEVDINGNSTR-FMHHYLNKAVSVLS--CNILDGTHDDSFDL 354
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
E+L+EP FS K LI +LS +RL+++MKCI+FV RI ARA+S+I++NLK L W+C F
Sbjct: 355 EMLEEPLFSNKFAVLINVLSRYRLEENMKCIIFVKRIAVARAISHIIRNLKCLDFWKCEF 414
Query: 458 LVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
LVG ++GLK+MSRN M I+EKF SGE+NLLVAT VGEEGLDIQTCCLV+RFDLPETVAS
Sbjct: 415 LVGCHSGLKNMSRNKMDDIVEKFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVAS 474
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI 577
FIQSRGRARM S+Y L++ GNQ + L+ N+ E MN EI RTS+D F EE
Sbjct: 475 FIQSRGRARMTISKYVVLLERGNQSQEKLLNNYIAGESIMNEEIDSRTSNDMFDYLEENT 534
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIH 637
Y+V+ +GA IS VSLLHRYC LP D FFNP P F+Y DD G IC +ILP NA
Sbjct: 535 YRVNHTGASISTACSVSLLHRYCYNLPSDMFFNPSPAFFYIDDTEGIICRVILPPNAAFR 594
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
Q+ G P S + AK+DACLKA H+LGAL D+LLP + S S+ E +
Sbjct: 595 QMDGQPCQSKDEAKRDACLKACMKFHELGALTDFLLPGPGSRKNKASSPNGSASNKEEDD 654
Query: 698 GSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAE 757
R ELHEML+P+VL+ S K + L+FY+ +F P PADR Y+ FGLFV + LP EAE
Sbjct: 655 SLREELHEMLIPSVLKPSRCKQDCLLDLHFYYFKFFPIPADRHYQMFGLFVINPLPEEAE 714
Query: 758 HLKVDLHLARGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGK 809
L+VDLHLARGR V T + G M A+ FQEMFLK++LDRSEF S V L
Sbjct: 715 KLEVDLHLARGRIVKTGIKHLGTMVFDKEQMILARNFQEMFLKILLDRSEFTSSDVILCN 774
Query: 810 DDYCESSSSTFYLLLPV-------IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSH 862
DD E SSTFYLLLP+ IF +DW + RCLSSPVF P S +
Sbjct: 775 DDTLE-ISSTFYLLLPIKQKCCGDIF---VIDWPTVVRCLSSPVFRDPVDVSVHGSYIPN 830
Query: 863 GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSY 922
L+L + S +DV SL++ H F+++ I+ + NG S + + +++ +H +
Sbjct: 831 ESLRLLDEVYSRTDVVGSLIFVPHNNTFFIIDVILDKLNGRSEF---NGATYEEHYRERF 887
Query: 923 GIHLKHPKQPLLRAKPLFRLRNLLHNRKLE--DSESHELEEYFDDLPPELCQLKIIGFSK 980
GI L HP+QPLL+AK LF L NLLH+R E DS EL E+F +LPPELC LKI GFSK
Sbjct: 888 GIELSHPEQPLLKAKQLFNLHNLLHDRLRETTDSRGSELVEHFVELPPELCSLKITGFSK 947
Query: 981 DIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLE 1040
D+ SSLSLLPS+M RLEN LVAIELK L+ +SFPE +++SA +L+A+TTE+C ER SLE
Sbjct: 948 DMSSSLSLLPSLMCRLENFLVAIELKDLMLSSFPEASQISASAILEAITTERCLERISLE 1007
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
R E+LGDAFLKY VGRH F+ ++ +DEG+LTRRRS+ VNNSNL +L+ + NLQVYIRDQ
Sbjct: 1008 RFEVLGDAFLKYVVGRHNFMSYEGLDEGQLTRRRSDIVNNSNLHELSVKRNLQVYIRDQQ 1067
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQ-YDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
F+P QFFALGR C +C + E +IH + D P++ N VRC+K HHWLHKKTIADVV
Sbjct: 1068 FEPTQFFALGRPCKVVCHADMEVSIHQKNIDPDRPENCN--VRCTKSHHWLHKKTIADVV 1125
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
E+L+GAF+ + GFKAA AFL W+GI V+FE S + + +S L L +++A LE L+
Sbjct: 1126 ESLLGAFLVEGGFKAAFAFLHWVGIDVDFEDSALYRVLNASSINLSLMNLINVAELEELI 1185
Query: 1220 GHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
G++F H+GL+++AFVHPSFN+ GGCYQ+LEFLGDAVL+YL+TSYLYS YP LKPG++TD
Sbjct: 1186 GYKFKHKGLIIEAFVHPSFNKHSGGCYQKLEFLGDAVLEYLMTSYLYSAYPDLKPGEITD 1245
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKV 1338
L+S+ V N +FA VA+ + +K++I DSN L++ ++ + +Y+ P+S +++ E P CPKV
Sbjct: 1246 LKSLAVCNDSFAYVAIQKCIHKYIIKDSNHLTKAVSKFENYIKLPNSEKDLVEEPACPKV 1305
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQ 1398
LGD+VES + A+LLDSGFNLN VWK++L L P+L FS + +NP+RE+ ELC +L+L
Sbjct: 1306 LGDIVESCVAAVLLDSGFNLNYVWKLVLMLLKPVLSFSGMHMNPMREIRELCQCNELELG 1365
Query: 1399 FPS-LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTK 1457
P +K G++ KV IS A N + K A ++A+++ SKLK GY K K
Sbjct: 1366 LPKPMKADGEY--HVKVEVNINSTMISCTAANRNSKVARKLAARETLSKLKNYGYKHKNK 1423
Query: 1458 SLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISE-------------PQGGSS 1504
SLE IL + K E L+GY+E PI V A + L+ISE P GGSS
Sbjct: 1424 SLEEILHDARKKEPELLGYNEEPIKVEADISVQMKSLQISEERDANFSFKNMEVPIGGSS 1483
Query: 1505 ---------------------------------CDIGSPSLTT------GGLQNRSARSR 1525
C + + G + +++A+S
Sbjct: 1484 KTSNQRTAGDTKIFKDDVNNERNNQLMVAMQNGCLLRGTTQKNNKKEYKGDMVHKTAKSF 1543
Query: 1526 LYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAP-EKIIECIGEPQAKKKGAAE 1584
L+ELCAA+ WKPP F C EEG SHL+ FT++VIV+I P E ++EC + + +KK A E
Sbjct: 1544 LFELCAASYWKPPEFQLCIEEGPSHLRRFTYKVIVQIRGPSETLLECYSDAKLQKKAAQE 1603
Query: 1585 HAAEGMLWCLEREGYL 1600
HAA+G LW L++ YL
Sbjct: 1604 HAAQGALWYLKQLEYL 1619
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 1496 bits (3872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1617 (51%), Positives = 1067/1617 (65%), Gaps = 86/1617 (5%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP+ IARKYQL+LCK+A+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP + +CIFLA
Sbjct: 24 KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLA 83
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
PT+ LV+QQA VI S FKV+ + G K + H +WE ++ ++EVLVM PQILL L H
Sbjct: 84 PTIPLVRQQAVVIASSTDFKVQCYYGNGKNSRDHQEWENDMREFEVLVMTPQILLQSLRH 143
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKGAS 231
FIKM IALLI DECHHAQ + HPYA+IMK+FY + + K PR+FGMTASP++GKG S
Sbjct: 144 CFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASPIIGKGGS 203
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+ N K INSLE LL AKV SV D E+LES V+SP + VY YGPV + S+ C ++
Sbjct: 204 NKLNYTKCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPV--NHSNLTTICIKE 260
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS-- 349
L +K Q L L D + + K L RLH+++ FCL+ LG GAL A+ LS
Sbjct: 261 LDSLKL-QSERMLRASLCDFKDSQKKLKSLWRLHENIIFCLQELGSFGALQAARTFLSFD 319
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR---DGIASDLSCIEVLKEPFFS 406
GD+ R E+ ++ S FA +I R DG + +E L+EPFFS
Sbjct: 320 GDKLDRREV------DLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEKLEEPFFS 373
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK 466
K LI +LS + LQ++MKCIVFV RI ARA+S ILQNLK L W+C FLVG ++G K
Sbjct: 374 NKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSK 433
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
+MSRN M +I+++F SGE+NLLVAT VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRAR
Sbjct: 434 NMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRAR 493
Query: 527 MPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
M +S+Y L++ NQ L+ + E MN EI RTS+D F C EE IY+VD++GA
Sbjct: 494 MTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMFDCLEENIYQVDNTGAS 553
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
IS VSLLH YC LP D FF P P F+Y D + G IC +ILP NA Q G P S
Sbjct: 554 ISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLS 613
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
+ AK+DACLKA LHKLGAL D+LLP + + +S ++ E + R ELHEM
Sbjct: 614 KDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEM 673
Query: 707 LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
L+PAVL+ S K L+FY+++FIP P DR Y+ FGLFV + LP EAE L+VDLHLA
Sbjct: 674 LIPAVLKPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQVDLHLA 733
Query: 767 RGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSS 818
RGR V + G +M A +FQEM LK++LDRSEF S V LG D E +S
Sbjct: 734 RGRIVKAGIKHLGKIAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDVTLE-INS 792
Query: 819 TFYLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE 874
TFYLLLP+ + +DW + RCLSSP+F P S S+ L+L +G S+
Sbjct: 793 TFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSK 852
Query: 875 SDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLL 934
+DV S+V++ H F+ V I+ E N +S + +++ +H + I L HP+QPLL
Sbjct: 853 TDVVGSVVFSPHNNIFFFVDGILDEINAWSEH---SGATYAEHFKERFRIELSHPEQPLL 909
Query: 935 RAKPLFRLRNLLHNRKLE--DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
+AK +F LRNLLHNR E +SE EL E+F +LPPELC LK+IGFSKD+GSSLSLLPS+
Sbjct: 910 KAKQIFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSL 969
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKY 1052
M+RLENLLVAIELK ++ +SFPE +++SA +L+ALTTEKC ER SLER E+LGDAFLKY
Sbjct: 970 MYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKY 1029
Query: 1053 AVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRR 1112
VGRH F+ ++ +DEG+LTRRRS+ VNNS+L +L+ R LQVYIRDQ F+P QFFA GR
Sbjct: 1030 VVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRP 1089
Query: 1113 CPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
C +C+ + E +H Q D + N +RC++ HHWLH+K IADVVE+L+GAF+ + GF
Sbjct: 1090 CKVVCNTDVEVRLH-QMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGF 1148
Query: 1173 KAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQA 1232
KAA AFL WIGI V+F + + SS L L D+A LE L+G++F H+GLLLQA
Sbjct: 1149 KAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQA 1208
Query: 1233 FVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
FVHPSF++ GGCYQRLEFLGDAVL+Y+ITSYLYS YP +KPGQ+TDLRS+ V N + A
Sbjct: 1209 FVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAY 1268
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAIL 1351
AV++S +K LI DSN L+ I+ + Y+ +S +++ E P CPK LGD+VES +GA+L
Sbjct: 1269 AAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKALGDIVESCIGAVL 1328
Query: 1352 LDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPS-LKKGGKFLA 1410
LDSGFNLN VWK+ML L P+L F+N+ NP+REL ELC + +L P +K G++
Sbjct: 1329 LDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHV 1388
Query: 1411 EAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSE 1470
+ +V K K I A N + K A + A+Q+ SKLK GY + KSLE IL + K E
Sbjct: 1389 KVEVNIKSK--IIICTAANRNSKAARKFAAQETLSKLKNYGYKHRNKSLEEILIVARKRE 1446
Query: 1471 ARLIGYDETPINVVA-----------ADDNV-FEKLKISEPQ----------GGSSCDIG 1508
+ LIGY+E PI+V A ++N+ F+ + S + G D+
Sbjct: 1447 SELIGYNEDPIDVEADISVKMKSPHIHEENIPFQNTETSFTRSSKFHNQIIAGSGKHDVN 1506
Query: 1509 S-----PSLTT-------------------GGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
+ P L T G + +++ARS L+ELCAAN WKPP F CK
Sbjct: 1507 NGRNNQPKLATQSGRLPSEATEKSNKKVYHGDMVHKTARSFLFELCAANYWKPPEFKLCK 1566
Query: 1545 EEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
EEG SHL+ FT++V+VEI+ A ++EC + + +KK A EHAA+G LWCL++ G+L
Sbjct: 1567 EEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQKKAAQEHAAQGALWCLKQLGHL 1623
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 1479 bits (3830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1643 (50%), Positives = 1067/1643 (64%), Gaps = 112/1643 (6%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP+ IARKYQL+LCK+A+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP + +CIFLA
Sbjct: 24 KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLA 83
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
PT+ LV+QQA VI S FKV+ + G K + H +WE ++ ++EVLVM PQILL L H
Sbjct: 84 PTIPLVRQQAVVIASSTDFKVQCYYGNGKNSRDHQEWENDMREFEVLVMTPQILLQSLRH 143
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKG-- 229
FIKM IALLI DECHHAQ + HPYA+IMK+FY + + K PR+FGMTASP++GKG
Sbjct: 144 CFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASPIIGKGVM 203
Query: 230 ------------------------ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVS 265
S + N K INSLE LL AKV SV D E+LES V+
Sbjct: 204 PSHSFTEKGGRSPCQPLIFFLPKGGSNKLNYTKCINSLEELLHAKVCSV-DNEELESVVA 262
Query: 266 SPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLH 325
SP + VY YGPV + S+ C ++L +K Q L L D + + K L RLH
Sbjct: 263 SPDMEVYFYGPV--NHSNLTTICIKELDSLKL-QSERMLRASLCDFKDSQKKLKSLWRLH 319
Query: 326 DSMKFCLENLGVCGALHASYILLS--GDETMRNELIEAEGNTIDDSLCRFASQASEVFAA 383
+++ FCL+ LG GAL A+ LS GD+ R E+ ++ S FA +
Sbjct: 320 ENIIFCLQELGSFGALQAARTFLSFDGDKLDRREV------DLNGSTSSFAHHYLNGATS 373
Query: 384 ICRR---DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
I R DG + +E L+EPFFS K LI +LS + LQ++MKCIVFV RI ARA+
Sbjct: 374 ILSRNKTDGSHAGSFDLEKLEEPFFSNKFSVLINVLSRYGLQENMKCIVFVKRITVARAI 433
Query: 441 SYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
S ILQNLK L W+C FLVG ++G K+MSRN M +I+++F SGE+NLLVAT VGEEGLDI
Sbjct: 434 SNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDI 493
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE 560
QTCCLV+RFDLPETVASFIQSRGRARM +S+Y L++ NQ L+ + E MN E
Sbjct: 494 QTCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEE 553
Query: 561 IMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
I RTS+D F C EE IY+VD++GA IS VSLLH YC LP D FF P P F+Y D
Sbjct: 554 IDSRTSNDMFDCLEENIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDG 613
Query: 621 LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNAT 680
+ G IC +ILP NA Q G P S + AK+DACLKA LHKLGAL D+LLP +
Sbjct: 614 IEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRK 673
Query: 681 EDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRI 740
+ +S ++ E + R ELHEML+PAVL+ S K L+FY+++FIP P DR
Sbjct: 674 NKVSVTNNSSNNKVEDDSLREELHEMLIPAVLKPSGLKLDSLSNLHFYYVKFIPIPEDRR 733
Query: 741 YREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLK 792
Y+ FGLFV + LP EAE L+VDLHLARGR V + G +M A +FQEM LK
Sbjct: 734 YQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIAFEKEKMMLAHKFQEMCLK 793
Query: 793 VILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV----IFHKNSVDWKIIRRCLSSPVFG 848
++LDRSEF S V LG D E +STFYLLLP+ + +DW + RCLSSP+F
Sbjct: 794 ILLDRSEFTSPHVKLGNDVTLE-INSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFK 852
Query: 849 TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKD 908
P S S+ L+L +G S++DV S+V++ H F+ V I+ E N +S +
Sbjct: 853 DPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINAWSEH-- 910
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLE--DSESHELEEYFDDL 966
+++ +H + I L HP+QPLL+AK +F LRNLLHNR E +SE EL E+F +L
Sbjct: 911 -SGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVEL 969
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
PPELC LK+IGFSKD+GSSLSLLPS+M+RLENLLVAIELK ++ +SFPE +++SA +L+
Sbjct: 970 PPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILE 1029
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALTTEKC ER SLER E+LGDAFLKY VGRH F+ ++ +DEG+LTRRRS+ VNNS+L +L
Sbjct: 1030 ALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYEL 1089
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
+ R LQVYIRDQ F+P QFFA GR C +C+ + E +H Q D + N +RC++
Sbjct: 1090 SIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLH-QMDIHPDNRENCNLRCTRS 1148
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
HHWLH+K IADVVE+L+GAF+ + GFKAA AFL WIGI V+F + + SS L L
Sbjct: 1149 HHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSL 1208
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLY 1265
D+A LE L+G++F H+GLLLQAFVHPSF++ GGCYQRLEFLGDAVL+Y+ITSYLY
Sbjct: 1209 MDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLY 1268
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
S YP +KPGQ+TDLRS+ V N + A AV++S +K LI DSN L+ I+ + Y+ +S
Sbjct: 1269 STYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNS 1328
Query: 1326 TREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRE 1385
+++ E P CPK LGD+VES +GA+LLDSGFNLN VWK+ML L P+L F+N+ NP+RE
Sbjct: 1329 EKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRE 1388
Query: 1386 LLELCNSYDLDLQFPS-LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLF 1444
L ELC + +L P +K G++ + +V K K I A N + K A + A+Q+
Sbjct: 1389 LRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSK--IIICTAANRNSKAARKFAAQETL 1446
Query: 1445 SKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVA-----------ADDNV-FE 1492
SKLK GY + KSLE IL + K E+ LIGY+E PI+V A ++N+ F+
Sbjct: 1447 SKLKNYGYKHRNKSLEEILIVARKRESELIGYNEDPIDVEADISVKMKSPHIHEENIPFQ 1506
Query: 1493 KLKISEPQ----------GGSSCDIGS-----PSLTT-------------------GGLQ 1518
+ S + G D+ + P L T G +
Sbjct: 1507 NTETSFTRSSKFHNQIIAGSGKHDVNNGRNNQPKLATQSGRLPSEATEKSNKKVYHGDMV 1566
Query: 1519 NRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQA 1577
+++ARS L+ELCAAN WKPP F CKEEG SHL+ FT++V+VEI+ A ++EC + +
Sbjct: 1567 HKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKL 1626
Query: 1578 KKKGAAEHAAEGMLWCLEREGYL 1600
+KK A EHAA+G LWCL++ G+L
Sbjct: 1627 QKKAAQEHAAQGALWCLKQLGHL 1649
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 1473 bits (3813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 814/1609 (50%), Positives = 1055/1609 (65%), Gaps = 97/1609 (6%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP+ IARKYQL+LCK+A+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP + +CIFLA
Sbjct: 24 KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLA 83
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
PT+ LV+QQA VI S FKV+ + G K + H +WE ++ ++EVLVM PQILL L H
Sbjct: 84 PTIPLVRQQAVVIASSTDFKVQCYYGNGKNSRDHQEWENDMREFEVLVMTPQILLQSLRH 143
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKGAS 231
FIKM IALLI DECHHAQ + HPYA+IMK+FY + + K PR+FGMTASP++GKG S
Sbjct: 144 CFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASPIIGKGGS 203
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+ N K INSLE LL AKV SV D E+LES V+SP + VY YGPV + S+ C ++
Sbjct: 204 NKLNYTKCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPV--NHSNLTTICIKE 260
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS-- 349
L +K Q L L D + + K L RLH+++ FCL+ LG GAL A+ LS
Sbjct: 261 LDSLKL-QSERMLRASLCDFKDSQKKLKSLWRLHENIIFCLQELGSFGALQAARTFLSFD 319
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR---DGIASDLSCIEVLKEPFFS 406
GD+ R E+ ++ S FA +I R DG + +E L+EPFFS
Sbjct: 320 GDKLDRREV------DLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEKLEEPFFS 373
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK 466
K LI +LS + LQ++MKCIVFV RI ARA+S ILQNLK L W+C FLVG ++G K
Sbjct: 374 NKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSK 433
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
+MSRN M +I+++F SGE+NLLVAT VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRAR
Sbjct: 434 NMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRAR 493
Query: 527 MPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
M +S+Y L++ NQ L+ + E MN EI RTS+D F C EE IY+VD++GA
Sbjct: 494 MTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMFDCLEENIYQVDNTGAS 553
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
IS VSLLH YC LP D FF P P F+Y D + G IC +ILP NA Q G P S
Sbjct: 554 ISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLS 613
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
+ AK+DACLKA LHKLGAL D+LLP + + +S ++ E + R ELHEM
Sbjct: 614 KDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEM 673
Query: 707 LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
L+PAVL+ S K L+FY+++FIP P DR Y+ FGLFV + LP EAE L+
Sbjct: 674 LIPAVLKPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQ------ 727
Query: 767 RGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV 826
+M A +FQEM LK++LDRSEF S V LG D E +STFYLLLP+
Sbjct: 728 -------------MMLAHKFQEMCLKILLDRSEFTSPHVKLGNDVTLE-INSTFYLLLPI 773
Query: 827 ----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLV 882
+ +DW + RCLSSP+F P S S+ L+L +G S++DV S+V
Sbjct: 774 KQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVV 833
Query: 883 YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRL 942
++ H F+ V I+ E N +S + +++ +H + I L HP+QPLL+AK +F L
Sbjct: 834 FSPHNNIFFFVDGILDEINAWSEH---SGATYAEHFKERFRIELSHPEQPLLKAKQIFNL 890
Query: 943 RNLLHNRKLE--DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
RNLLHNR E +SE EL E+F +LPPELC LK+IGFSKD+GSSLSLLPS+M+RLENLL
Sbjct: 891 RNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 950
Query: 1001 VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
VAIELK ++ +SFPE +++SA +L+ALTTEKC ER SLER E+LGDAFLKY VGRH F+
Sbjct: 951 VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 1010
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKE 1120
++ +DEG+LTRRRS+ VNNS+L +L+ R LQVYIRDQ F+P QFFA GR C +C+ +
Sbjct: 1011 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTD 1070
Query: 1121 TERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLK 1180
E +H Q D + N +RC++ HHWLH+K IADVVE+L+GAF+ + GFKAA AFL
Sbjct: 1071 VEVRLH-QMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLH 1129
Query: 1181 WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR 1240
WIGI V+F + + SS L L D+A LE L+G++F H+GLLLQAFVHPSF++
Sbjct: 1130 WIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQ 1189
Query: 1241 -LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFY 1299
GGCYQRLEFLGDAVL+Y+ITSYLYS YP +KPGQ+TDLRS+ V N + A AV++S +
Sbjct: 1190 HSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 1249
Query: 1300 KFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLN 1359
K LI DSN L+ I+ + Y+ +S +++ E P CPK LGD+VES +GA+LLDSGFNLN
Sbjct: 1250 KHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLN 1309
Query: 1360 TVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPS-LKKGGKFLAEAKVTGKD 1418
VWK+ML L P+L F+N+ NP+REL ELC + +L P +K G++ + +V K
Sbjct: 1310 YVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKS 1369
Query: 1419 KDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDE 1478
K I A N + K A + A+Q+ SKLK GY + KSLE IL + K E+ LIGY+E
Sbjct: 1370 K--IIICTAANRNSKAARKFAAQETLSKLKNYGYKHRNKSLEEILIVARKRESELIGYNE 1427
Query: 1479 TPINVVA-----------ADDNV-FEKLKISEPQ----------GGSSCDIGS-----PS 1511
PI+V A ++N+ F+ + S + G D+ + P
Sbjct: 1428 DPIDVEADISVKMKSPHIHEENIPFQNTETSFTRSSKFHNQIIAGSGKHDVNNGRNNQPK 1487
Query: 1512 LTT-------------------GGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLK 1552
L T G + +++ARS L+ELCAAN WKPP F CKEEG SHL+
Sbjct: 1488 LATQSGRLPSEATEKSNKKVYHGDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLR 1547
Query: 1553 LFTFRVIVEIE-APEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
FT++V+VEI+ A ++EC + + +KK A EHAA+G LWCL++ G+L
Sbjct: 1548 KFTYKVVVEIKGASATLLECHSDGKLQKKAAQEHAAQGALWCLKQLGHL 1596
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 1372 bits (3550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/1623 (48%), Positives = 1019/1623 (62%), Gaps = 153/1623 (9%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP+ IARKYQL+LCK+A+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP +
Sbjct: 24 KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSR------- 76
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
+QA VI S FKV+ + G K + H +WE ++ ++E
Sbjct: 77 -------EQAVVIASSTDFKVQCYYGNGKNSRDHQEWENDMREFE--------------- 114
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKGAS 231
+FY + + K PR+FGMTASP++GKG S
Sbjct: 115 --------------------------------EFYNSNSVEKFPRVFGMTASPIIGKGGS 142
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+ N K INSLE LL AKV SV D E+LES V+SP + VY YGPV + S+ C ++
Sbjct: 143 NKLNYTKCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPV--NHSNLTTICIKE 199
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS-- 349
L +K Q L L D + + K L RLH+++ FCL+ LG GAL A+ LS
Sbjct: 200 LDSLKL-QSERMLRASLCDFKDSQKKLKSLWRLHENIIFCLQELGSFGALQAARTFLSFD 258
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR---DGIASDLSCIEVLKEPFFS 406
GD+ R E+ ++ S FA +I R DG + +E L+EPFFS
Sbjct: 259 GDKLDRREV------DLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEKLEEPFFS 312
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK 466
K LI +LS + LQ++MKCIVFV RI ARA+S ILQNLK L W+C FLVG ++G K
Sbjct: 313 NKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSK 372
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
+MSRN M +I+++F SGE+NLLVAT VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRAR
Sbjct: 373 NMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRAR 432
Query: 527 MPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
M +S+Y L++ NQ L+ + E MN EI RTS+D F C EE IY+VD++GA
Sbjct: 433 MTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMFDCLEENIYQVDNTGAS 492
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
IS VSLLH YC LP D FF P P F+Y D + G IC +ILP NA Q G P S
Sbjct: 493 ISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLS 552
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
+ AK+DACLKA LHKLGAL D+LLP + + +S ++ E + R ELHEM
Sbjct: 553 KDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEM 612
Query: 707 LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
L+PAVL+ S K L+FY+++FIP P DR Y+ FGLFV + LP EAE L+VDLHLA
Sbjct: 613 LIPAVLKPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQVDLHLA 672
Query: 767 RGRSVMTKLVPSG--------------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDY 812
RGR V + G +M A +FQEM LK++LDRSEF S V LG D
Sbjct: 673 RGRIVKAGIKHLGKIAFEKEKASSCSSMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDVT 732
Query: 813 CESSSSTFYLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLH 868
E +STFYLLLP+ + +DW + RCLSSP+F P S S+ L+L
Sbjct: 733 LE-INSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLL 791
Query: 869 NGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKH 928
+G S++DV S+V++ H F+ V I+ E N +S + +++ +H + I L H
Sbjct: 792 DGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINAWSEH---SGATYAEHFKERFRIELSH 848
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLE--DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSL 986
P+QPLL+AK +F LRNLLHNR E +SE EL E+F +LPPELC LK+IGFSKD+GSSL
Sbjct: 849 PEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSL 908
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
SLLPS+M+RLENLLVAIELK ++ +SFPE +++SA +L+ALTTEKC ER SLER E+LG
Sbjct: 909 SLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLG 968
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
DAFLKY VGRH F+ ++ +DEG+LTRRRS+ VNNS+L +L+ R LQVYIRDQ F+P QF
Sbjct: 969 DAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQF 1028
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
FA GR C +C+ + E +H Q D + N +RC++ HHWLH+K IADVVE+L+GAF
Sbjct: 1029 FAPGRPCKVVCNTDVEVRLH-QMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAF 1087
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
+ + GFKAA AFL WIGI V+F + + SS L L D+A LE L+G++F H+
Sbjct: 1088 LVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHK 1147
Query: 1227 GLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
GLLLQAFVHPSF++ GGCYQRLEFLGDAVL+Y+ITSYLYS YP +KPGQ+TDLRS+ V
Sbjct: 1148 GLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVG 1207
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVES 1345
N + A AV++S +K LI DSN L+ I+ + Y+ +S +++ E P CPK LGD+VES
Sbjct: 1208 NDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKALGDIVES 1267
Query: 1346 SLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPS-LKK 1404
+GA+LLDSGFNLN VWK+ML L P+L F+N+ NP+REL ELC + +L P +K
Sbjct: 1268 CIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKA 1327
Query: 1405 GGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILK 1464
G++ + +V K K I A N + K A + A+Q+ SKLK GY + KSLE IL
Sbjct: 1328 DGEYHVKVEVNIKSK--IIICTAANRNSKAARKFAAQETLSKLKNYGYKHRNKSLEEILI 1385
Query: 1465 SSPKSEARLIGYDETPINVVA-----------ADDNV-FEKLKISEPQ----------GG 1502
+ K E+ LIGY+E PI+V A ++N+ F+ + S + G
Sbjct: 1386 VARKRESELIGYNEDPIDVEADISVKMKSPHIHEENIPFQNTETSFTRSSKFHNQIIAGS 1445
Query: 1503 SSCDIGS-----PSLTT-------------------GGLQNRSARSRLYELCAANCWKPP 1538
D+ + P L T G + +++ARS L+ELCAAN WKPP
Sbjct: 1446 GKHDVNNGRNNQPKLATQSGRLPSEATEKSNKKVYHGDMVHKTARSFLFELCAANYWKPP 1505
Query: 1539 TFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQAKKKGAAEHAAEGMLWCLERE 1597
F CKEEG SHL+ FT++V+VEI+ A ++EC + + +KK A EHAA+G LWCL++
Sbjct: 1506 EFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQKKAAQEHAAQGALWCLKQL 1565
Query: 1598 GYL 1600
G+L
Sbjct: 1566 GHL 1568
>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
sativus]
Length = 1228
Score = 1329 bits (3439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/1194 (59%), Positives = 862/1194 (72%), Gaps = 67/1194 (5%)
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
L ++SR+ K + SG LNLL+ATKVGEEGLDIQTCCLVIRFDLPETV+SFIQSRG
Sbjct: 33 ALMTLSRSFWKRLGP---SGALNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRG 89
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSS 583
RARMPQSEYAFLVDSGN++EL LI F K+E+RMNREI R+S++ F EE IY+V S+
Sbjct: 90 RARMPQSEYAFLVDSGNEKELGLINEFRKDENRMNREIYSRSSNETFDSHEESIYRVAST 149
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTP 643
GA I++G +SLLH YCSKLPHD++F+PKP+F Y+DDLGGT+CH+ LP+NAPI QIV
Sbjct: 150 GASITSGRSISLLHEYCSKLPHDDYFDPKPQFSYYDDLGGTVCHVNLPSNAPIPQIVSRS 209
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQED--NATEDEPMLFSSDSDSYEGEGSRG 701
QSS +AAKKDACLKA+E+LHKLGAL+DYLLP +A E E L SSDSDS E E SR
Sbjct: 210 QSSKDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESGLNSSDSDSSEDETSRR 269
Query: 702 ELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKV 761
ELHEM+ PA L++SWT S Y V L Y ++ PDP DR Y+EFGLFVK+ LP EAE + +
Sbjct: 270 ELHEMIFPAALKESWTGSGYLV-LYCYHIKCTPDPRDRNYKEFGLFVKAPLPQEAERMGL 328
Query: 762 DLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYC 813
+LHLARGRSVM L+PSG I QA+ FQEMFLKVILDR EF E++PL +
Sbjct: 329 ELHLARGRSVMVNLIPSGVVELLEEEITQAESFQEMFLKVILDRLEFVQEYIPLRNN--A 386
Query: 814 ESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
S S+ YLLLP+IFH N +DW +IRRCLSS +F + + + S L L++
Sbjct: 387 SRSVSSSYLLLPMIFHDNEGSLFIDWNVIRRCLSSKIFQNDACLIVKGTASSDTHLMLYD 446
Query: 870 GWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHP 929
G SD+ENSLVY +K F VTNI KNG+S YK+S SSH +HL + +GIHL +P
Sbjct: 447 GHRRSSDIENSLVYVPYKGEFXFVTNIERGKNGHSQYKNSGFSSHFEHLKTKFGIHLNYP 506
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
+QPLLRAKPLF L N LHNRK EDSE+ LEEYF +LPPE+CQLKIIGFSKDIGSS+SLL
Sbjct: 507 EQPLLRAKPLFLLHNWLHNRKREDSEARHLEEYFIELPPEVCQLKIIGFSKDIGSSISLL 566
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAF 1049
PSIMHRLENLLVAIELK L+A+FP GAEV+A +L+ALTTEKCQER SLERLEILGD+F
Sbjct: 567 PSIMHRLENLLVAIELKCRLAAAFPAGAEVTANRILEALTTEKCQERISLERLEILGDSF 626
Query: 1050 LKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFAL 1109
LK+AV R+LFL HD DEGELTRRRS V N NLLKLA R NLQVYIRDQPF+P QF+ L
Sbjct: 627 LKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLL 686
Query: 1110 GRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDD 1169
GR CPRIC++ET + IHS D N E +CSKGHHWL KKTI+DVVEALVGAF+ D
Sbjct: 687 GRPCPRICNEETSKDIHSHDDATNNAKAN-ETKCSKGHHWLQKKTISDVVEALVGAFLVD 745
Query: 1170 SGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLL 1229
SGFKAA AFLKWIGIQVEFEAS VT+ ++S +++ L+ S+D++ L+ LGH+FLH+GLL
Sbjct: 746 SGFKAAIAFLKWIGIQVEFEASLVTDALMASNAYVLLADSIDISALQNSLGHRFLHKGLL 805
Query: 1230 LQAFVHPSFNRLGG-CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
LQA VHPS+++ GG CYQRLEFLGDAVLDYLITSYLYS YPKLKPGQLTDLRS+ V N+A
Sbjct: 806 LQALVHPSYHKHGGGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEA 865
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLG 1348
FANVAVD+ FYKFL+ DS L I +YV ++ P R+ E PRCPK LGDLVESS+G
Sbjct: 866 FANVAVDRFFYKFLLCDSTSLLSDIKSYVHFIKAPPFERDSLEQPRCPKALGDLVESSVG 925
Query: 1349 AILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKF 1408
A+L+D+GF++N VWKIMLSF+DPI+ FS QL+PIR++ E C + L+F S K G +
Sbjct: 926 AVLVDTGFDMNCVWKIMLSFIDPIMSFSGFQLSPIRDITEFCQNCGWKLKFNSSKMEGYY 985
Query: 1409 LAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPK 1468
+A+V G + +A A N +K+A +IA+ + +KLKA G++P+ SLE ILKSS K
Sbjct: 986 SVKAEVKGGN--FHATASAANRRKKDAAKIAANLILTKLKAKGFIPEVNSLEEILKSSKK 1043
Query: 1469 SEARLIGYDETPINVVAADDNVFEKLKI-------SEPQGGSSCDIGSP----------- 1510
E +LIGYDETP + DN L + S+P+ D P
Sbjct: 1044 MEPKLIGYDETPSITIDQVDNGHRTLNVLEFSSEHSDPRMHCVVDNSEPVRITRISKMLV 1103
Query: 1511 -SLTTGGLQ-----------------------NRSARSRLYELCAANCWKPPTFDCCKEE 1546
S T G Q +ARSRLYE+CAAN W P+FDC EE
Sbjct: 1104 SSSRTAGEQLKPAFEGHDSPTDLQVISVGRSGKTTARSRLYEVCAANHWNRPSFDCMNEE 1163
Query: 1547 GLSHLKLFTFRVIVEI-EAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGY 1599
G SHLK+FT++V++EI EAP+ I E G P KKK AAEHAAE LW LE+ GY
Sbjct: 1164 GPSHLKMFTYKVVLEIEEAPDTIFEFFGAPHLKKKAAAEHAAEAALWYLEKGGY 1217
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 1238 bits (3204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/1628 (45%), Positives = 981/1628 (60%), Gaps = 172/1628 (10%)
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
+YQL+LCK+A+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP + +
Sbjct: 81 RYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSR--------------E 126
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QA VI S FKV+ + G K + H +WE ++ ++E
Sbjct: 127 QAVVIASSTDFKVQCYYGNGKNSRDHQEWENDMREFE----------------------- 163
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKGASAQANLPKS 239
+FY + + K PR+FGMTASP++GKG S + N K
Sbjct: 164 ------------------------EFYNSNSVEKFPRVFGMTASPIIGKGGSNKLNYTKC 199
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQ 299
INSLE LL AKV SV D E+LES V+SP + VY YGPV + S+ C ++L +K Q
Sbjct: 200 INSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPV--NHSNLTTICIKELDSLKL-Q 255
Query: 300 YISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS--GDETMRNE 357
L L D + + K L RLH+++ FCL+ LG GAL A+ LS GD+ R E
Sbjct: 256 SERMLRASLCDFKDSQKKLKSLWRLHENIIFCLQELGSFGALQAARTFLSFDGDKLDRRE 315
Query: 358 LIEAEGNTIDDSLCRFASQASEVFAAICRR---DGIASDLSCIEVLKEPFFSKKLLRLIG 414
+ ++ S FA +I R DG + +E L+EPFFS K LI
Sbjct: 316 V------DLNGSTSSFAHHYLNGATSILSRNKTDGSHAGSFDLEKLEEPFFSNKFSVLIN 369
Query: 415 ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMK 474
+LS + LQ++MKCIVFV RI ARA+S ILQNLK L W+C FLVG ++G K+MSRN M
Sbjct: 370 VLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMD 429
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+I+++F SGE+NLLVAT VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRARM +S+Y
Sbjct: 430 AIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMTKSKYVV 489
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVS 594
L++ NQ L+ + E MN EI RTS+D F C EE IY+VD++GA IS VS
Sbjct: 490 LLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMFDCLEENIYQVDNTGASISTACSVS 549
Query: 595 LLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDA 654
LLH YC LP D FF P P F+Y D + G IC +ILP NA Q G P S + AK+DA
Sbjct: 550 LLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDA 609
Query: 655 CLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQ 714
CLKA LHKLGAL D+LLP + + +S ++ E + R ELHEML+PAVL+
Sbjct: 610 CLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLKP 669
Query: 715 SWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTK 774
S K L+FY+++FIP P DR Y+ FGLFV + LP EAE L+VDLHLARGR V
Sbjct: 670 SGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAG 729
Query: 775 LVP--------------SGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTF 820
+ S +M A +FQEM LK++LDRSEF S V LG D E +S TF
Sbjct: 730 IKHLGKIAFEKEKASSCSSMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDVTLEINS-TF 788
Query: 821 YLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESD 876
YLLLP+ + +DW + RCLSSP+F P S S+ L+L +G S++D
Sbjct: 789 YLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTD 848
Query: 877 VENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRA 936
V S+V++ H F+ V I+ E N +S + +++ +H + I L HP+QPLL+A
Sbjct: 849 VVGSVVFSPHNNIFFFVDGILDEINAWSEH---SGATYAEHFKERFRIELSHPEQPLLKA 905
Query: 937 KPLFRLRNLLHNRKLE--DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMH 994
K +F LRNLLHNR E +SE EL E+F +LPPELC LK+IGFSKD+GSSLSLLPS+M+
Sbjct: 906 KQIFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMY 965
Query: 995 RLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAV 1054
RLENLLVAIELK ++ +SFPE +++SA +L+ALTTEKC ER SLER E+LGDAFLKY V
Sbjct: 966 RLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVV 1025
Query: 1055 GRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCP 1114
GRH F+ ++ +DEG+LTRRRS+ VNNS+L +L+ R LQVYIRDQ F+P QFFA GR C
Sbjct: 1026 GRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCK 1085
Query: 1115 RICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKA 1174
+C+ + E +H Q D + N +RC++ HHWLH+K IADVVE+L+GAF+ + GFKA
Sbjct: 1086 VVCNTDVEVRLH-QMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKA 1144
Query: 1175 ATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFV 1234
A AFL WIGI V+F + + SS L L D+A LE L+G++F H+GLLLQAFV
Sbjct: 1145 AFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFV 1204
Query: 1235 HPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA 1293
HPSF++ GGCYQ+ EFLGDAVL+Y+ITSYLYS YP +KPGQ+TDLRS+ V N + A A
Sbjct: 1205 HPSFSQHSGGCYQKTEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAA 1264
Query: 1294 VDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPK---VLGDLVESSLGAI 1350
V++S +K LI DSN L+ I+ + Y+ +S +++ E P CPK LGD V +
Sbjct: 1265 VEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKRLEFLGDAVLEYVITS 1324
Query: 1351 LLDSGFNLNTVWKIM----LSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG 1406
L S + +I L+ + L ++ ++ + + L++ N +
Sbjct: 1325 YLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAI--------S 1376
Query: 1407 KFLAEAKVTGKDKDVFIS-ACATNLSRKEAIRIASQQLFSKL------KAAGYVPKTKSL 1459
KF K++ +KD+ AC L I + L S K GY + KSL
Sbjct: 1377 KFEMYVKLSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKNYGYKHRNKSL 1436
Query: 1460 ESILKSSPKSEARLIGYDETPINVVA-----------ADDNV-FEKLKISEPQ------- 1500
E IL + K E+ LIGY+E PI+V A ++N+ F+ + S +
Sbjct: 1437 EEILIVARKRESELIGYNEDPIDVEADISVKMKSPHIHEENIPFQNTETSFTRSSKFHNQ 1496
Query: 1501 ---GGSSCDIGS-----PSLTT-------------------GGLQNRSARSRLYELCAAN 1533
G D+ + P L T G + +++ARS L+ELCAAN
Sbjct: 1497 IIAGSGKHDVNNGRNNQPKLATQSGRLPSEATEKSNKKVYHGDMVHKTARSFLFELCAAN 1556
Query: 1534 CWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQAKKKGAAEHAAEGMLW 1592
WKPP F CKEEG SHL+ FT++V+VEI+ A ++EC + + +KK A EHAA+G LW
Sbjct: 1557 YWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQKKAAQEHAAQGALW 1616
Query: 1593 CLEREGYL 1600
CL++ G+L
Sbjct: 1617 CLKQLGHL 1624
>gi|115459356|ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza sativa Japonica Group]
Length = 1090
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/1089 (48%), Positives = 705/1089 (64%), Gaps = 70/1089 (6%)
Query: 575 ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANA 634
E IY+VD++GA IS VSLLH YC LP D FF P P F+Y D + G IC +ILP NA
Sbjct: 1 ENIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNA 60
Query: 635 PIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSY 694
Q G P S + AK+DACLKA LHKLGAL D+LLP + + +S ++
Sbjct: 61 AFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKV 120
Query: 695 EGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG 754
E + R ELHEML+PAVL+ S K L+FY+++FIP P DR Y+ FGLFV + LP
Sbjct: 121 EDDSLREELHEMLIPAVLKPSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPV 180
Query: 755 EAEHLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVP 806
EAE L+VDLHLARGR V + G +M A +FQEM LK++LDRSEF S V
Sbjct: 181 EAETLQVDLHLARGRIVKAGIKHLGKIAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVK 240
Query: 807 LGKDDYCESSSSTFYLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSH 862
LG D E +S TFYLLLP+ + +DW + RCLSSP+F P S S+
Sbjct: 241 LGNDVTLEINS-TFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSN 299
Query: 863 GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSY 922
L+L +G S++DV S+V++ H F+ V I+ E N +S + +++ +H +
Sbjct: 300 ESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINAWS---EHSGATYAEHFKERF 356
Query: 923 GIHLKHPKQPLLRAKPLFRLRNLLHNRKLE--DSESHELEEYFDDLPPELCQLKIIGFSK 980
I L HP+QPLL+AK +F LRNLLHNR E +SE EL E+F +LPPELC LK+IGFSK
Sbjct: 357 RIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVELPPELCSLKVIGFSK 416
Query: 981 DIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLE 1040
D+GSSLSLLPS+M+RLENLLVAIELK ++ +SFPE +++SA +L+ALTTEKC ER SLE
Sbjct: 417 DMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLE 476
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
R E+LGDAFLKY VGRH F+ ++ +DEG+LTRRRS+ VNNS+L +L+ R LQVYIRDQ
Sbjct: 477 RFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQ 536
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVE 1160
F+P QFFA GR C +C+ + E +H Q D + N +RC++ HHWLH+K IADVVE
Sbjct: 537 FEPTQFFAPGRPCKVVCNTDVEVRLH-QMDIHPDNRENCNLRCTRSHHWLHRKVIADVVE 595
Query: 1161 ALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLG 1220
+L+GAF+ + GFKAA AFL WIGI V+F + + SS L L D+A LE L+G
Sbjct: 596 SLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIG 655
Query: 1221 HQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
++F H+GLLLQAFVHPSF++ GGCYQRLEFLGDAVL+Y+ITSYLYS YP +KPGQ+TDL
Sbjct: 656 YKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDL 715
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVL 1339
RS+ V N + A AV++S +K LI DSN L+ I+ + Y+ +S +++ E P CPK L
Sbjct: 716 RSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKAL 775
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQF 1399
GD+VES +GA+LLDSGFNLN VWK+ML L P+L F+N+ NP+REL ELC + +L
Sbjct: 776 GDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFELGL 835
Query: 1400 PS-LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKS 1458
P +K G++ + +V K K I A N + K A + A+Q+ SKLK GY + KS
Sbjct: 836 PKPMKADGEYHVKVEVNIKSK--IIICTAANRNSKAARKFAAQETLSKLKNYGYKHRNKS 893
Query: 1459 LESILKSSPKSEARLIGYDETPINVVA-----------ADDNV-FEKLKISEPQ------ 1500
LE IL + K E+ LIGY+E PI+V A ++N+ F+ + S +
Sbjct: 894 LEEILIVARKRESELIGYNEDPIDVEADISVKMKSPHIHEENIPFQNTETSFTRSSKFHN 953
Query: 1501 ----GGSSCDIGS-----PSLTT-------------------GGLQNRSARSRLYELCAA 1532
G D+ + P L T G + +++ARS L+ELCAA
Sbjct: 954 QIIAGSGKHDVNNGRNNQPKLATQSGRLPSEATEKSNKKVYHGDMVHKTARSFLFELCAA 1013
Query: 1533 NCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQAKKKGAAEHAAEGML 1591
N WKPP F CKEEG SHL+ FT++V+VEI+ A ++EC + + +KK A EHAA+G L
Sbjct: 1014 NYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQKKAAQEHAAQGAL 1073
Query: 1592 WCLEREGYL 1600
WCL++ G+L
Sbjct: 1074 WCLKQLGHL 1082
>gi|215694849|dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1058
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/1056 (48%), Positives = 683/1056 (64%), Gaps = 70/1056 (6%)
Query: 608 FFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
FF P P F+Y D + G IC +ILP NA Q G P S + AK+DACLKA LHKLGA
Sbjct: 2 FFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 61
Query: 668 LNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
L D+LLP + + +S ++ E + R ELHEML+PAVL+ S K L+F
Sbjct: 62 LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLKPSGLKLDSLSNLHF 121
Query: 728 YFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG-------- 779
Y+++FIP P DR Y+ FGLFV + LP EAE L+VDLHLARGR V + G
Sbjct: 122 YYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIAFEKEK 181
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV----IFHKNSVDW 835
+M A +FQEM LK++LDRSEF S V LG D E +S TFYLLLP+ + +DW
Sbjct: 182 MMLAHKFQEMCLKILLDRSEFTSPHVKLGNDVTLEINS-TFYLLLPIKQKCYGDRFMIDW 240
Query: 836 KIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTN 895
+ RCLSSP+F P S S+ L+L +G S++DV S+V++ H F+ V
Sbjct: 241 PAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDG 300
Query: 896 IVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLE--D 953
I+ E N +S + +++ +H + I L HP+QPLL+AK +F LRNLLHNR E +
Sbjct: 301 ILDEINAWS---EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTE 357
Query: 954 SESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
SE EL E+F +LPPELC LK+IGFSKD+GSSLSLLPS+M+RLENLLVAIELK ++ +SF
Sbjct: 358 SEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSF 417
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
PE +++SA +L+ALTTEKC ER SLER E+LGDAFLKY VGRH F+ ++ +DEG+LTRR
Sbjct: 418 PEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRR 477
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRA 1133
RS+ VNNS+L +L+ R LQVYIRDQ F+P QFFA GR C +C+ + E +H Q D
Sbjct: 478 RSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLH-QMDIHP 536
Query: 1134 PDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQV 1193
+ N +RC++ HHWLH+K IADVVE+L+GAF+ + GFKAA AFL WIGI V+F +
Sbjct: 537 DNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPAL 596
Query: 1194 TNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLG 1252
+ SS L L D+A LE L+G++F H+GLLLQAFVHPSF++ GGCYQRLEFLG
Sbjct: 597 YRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLG 656
Query: 1253 DAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSET 1312
DAVL+Y+ITSYLYS YP +KPGQ+TDLRS+ V N + A AV++S +K LI DSN L+
Sbjct: 657 DAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSA 716
Query: 1313 INNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
I+ + Y+ +S +++ E P CPK LGD+VES +GA+LLDSGFNLN VWK+ML L P+
Sbjct: 717 ISKFEMYVKLSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPV 776
Query: 1373 LKFSNLQLNPIRELLELCNSYDLDLQFPS-LKKGGKFLAEAKVTGKDKDVFISACATNLS 1431
L F+N+ NP+REL ELC + +L P +K G++ + +V K K I A N +
Sbjct: 777 LTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSK--IIICTAANRN 834
Query: 1432 RKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVA------ 1485
K A + A+Q+ SKLK GY + KSLE IL + K E+ LIGY+E PI+V A
Sbjct: 835 SKAARKFAAQETLSKLKNYGYKHRNKSLEEILIVARKRESELIGYNEDPIDVEADISVKM 894
Query: 1486 -----ADDNV-FEKLKISEPQ----------GGSSCDIGS-----PSLTT---------- 1514
++N+ F+ + S + G D+ + P L T
Sbjct: 895 KSPHIHEENIPFQNTETSFTRSSKFHNQIIAGSGKHDVNNGRNNQPKLATQSGRLPSEAT 954
Query: 1515 ---------GGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-A 1564
G + +++ARS L+ELCAAN WKPP F CKEEG SHL+ FT++V+VEI+ A
Sbjct: 955 EKSNKKVYHGDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGA 1014
Query: 1565 PEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
++EC + + +KK A EHAA+G LWCL++ G+L
Sbjct: 1015 SATLLECHSDGKLQKKAAQEHAAQGALWCLKQLGHL 1050
>gi|115441737|ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:
Full=Dicer-like protein 3a; Short=OsDCL3a
gi|56785369|dbj|BAD82327.1| putative Endoribonuclease Dicer homolog [Oryza sativa Japonica Group]
gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa Japonica Group]
Length = 1651
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1675 (33%), Positives = 848/1675 (50%), Gaps = 159/1675 (9%)
Query: 43 ESSVGAQKTDKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E G QK K Q R+YQL++ + AM N I L TG GKT IAV+LI E +
Sbjct: 14 EHEAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKIN 73
Query: 101 R-KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEV 158
R K + IFLAPTV LV QQ +VIE F+V + G + + W+++I +Y+V
Sbjct: 74 RTKNAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRWQEQISKYQV 133
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIF 218
+VM PQ+ L L + F+ +++++L+IFDECHHA NHPY +IMK+FY K P +F
Sbjct: 134 MVMTPQVFLQALRNAFLILDMVSLMIFDECHHAT--GNHPYTRIMKEFYHKSEHK-PSVF 190
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGP 276
GMTASPV+ KG S+ + LENLLDAK+Y+V D E++E V S + R Y P
Sbjct: 191 GMTASPVIRKGISSHLDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKP 250
Query: 277 VINDTSSSYVTCSEQLAEI--KREQYISALSRKLHD-HQSLRNTTKQLNR-LHDSMK--- 329
V + SE+L + K + I+ L K D ++ + TK+ R L S+
Sbjct: 251 V------CFEDLSEELGVLCSKYDALITELQNKRSDMYKDADDITKESKRRLSKSIAKIC 304
Query: 330 FCLENLGVCGALHASYILL--SGDETMRNELIEAEGNTIDDSLCRFASQAS--------E 379
+CL+++G+ A A+ I + ++ E+++A D + R ++ S E
Sbjct: 305 YCLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEE 364
Query: 380 VFAAICRR--DGI----ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNR 433
I +R GI S+ C+E K + S KL LI I +F +H +C++FV+R
Sbjct: 365 ALHLIDKRLQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDR 424
Query: 434 IVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKV 493
+TAR + +++ + LA + FL G + + +++ K L+ FRSG++NLL T V
Sbjct: 425 KITARVIDRMIKKIGHLAHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDV 484
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE 553
EEG+ + C VIRFDLP T S++QSRGRAR S+Y +++ GN ++ DLI +
Sbjct: 485 AEEGIHVPECSCVIRFDLPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRS 544
Query: 554 EDRMNREIMDRTS---SDAFTCSEE-RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
E M + R S S F +EE Y V ++GA ++A +S+++RYC KLP D+ +
Sbjct: 545 ETSMVKIASSRESGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCY 604
Query: 610 NPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
+PKP F + G +C + LP +A + +VG +M AK+ CL A + LH+LGAL+
Sbjct: 605 SPKPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALD 664
Query: 670 DYL-LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFY 728
D+L L ED P + S + + G R ELH +W + ++L Y
Sbjct: 665 DHLCLSVEDPV----PEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY 720
Query: 729 FMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIM------- 781
M F+ D A +IY EF L + + LP E L++DL+L + V T + G++
Sbjct: 721 KMNFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYL-HDKMVKTSVSSCGLLELDAQQM 779
Query: 782 -QAQQFQEMFLKVILDRSEFNSEFVP-------LGKDDYCESSSSTFYLLLPV--IFHKN 831
QA+ FQ + + + F VP L K+D ++++ YLLLP F N
Sbjct: 780 EQAKLFQGLLFNGLFGKL-FTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSN 838
Query: 832 -SVDWKIIRRCLSSPVFGTPGGSVDRKSL-------PSHGPL-QLHNGWSSESDVENSLV 882
++W +I ++ S +++ L + G L L N + +++ +V
Sbjct: 839 VCINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVV 898
Query: 883 YATHKKWFYLVTNIV-----FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAK 937
A H Y +I +G S K+ + ++ YGI L+HP QPLL K
Sbjct: 899 LAVHTGKIYTALDITELSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLK 958
Query: 938 PLFRLRNLLHNRKLEDSESHELEEYFDD------------LPPELCQLKIIGFSKDIGSS 985
P NLL + K D E + +E + +PPEL L + +I S
Sbjct: 959 PSHNPHNLL-SSKFRD-EGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILRS 1014
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
L P++M+R+E+L +A +L+ + S + +S+ ++L+A+TT +C E FS+ERLE+L
Sbjct: 1015 FYLFPALMYRIESLTLASQLRSEIGYS---DSNISSFLILEAITTLRCSEDFSMERLELL 1071
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LKYAV HLFL DEG+L+ R + + N+ L KL N+Q Y+RD FDP +
Sbjct: 1072 GDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRR 1131
Query: 1106 FFALGR--------RCPRICSKETERTIHSQYD-----GRAPDDLNAEVRCSKGHHWLHK 1152
+ A G+ CP + S+ IH D G+A C KGH W+
Sbjct: 1132 WLAPGQLSIRPSPCECP-VKSEVVTDDIHIIDDKAIVLGKA---------CDKGHRWMCS 1181
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS--KSFLPLSASL 1210
KTIAD VEA++GA+ G +AA A LKW+GI E E + +S+ +++LP
Sbjct: 1182 KTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVF 1241
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVY 1268
+M LE LG+ F +GLL++A HPS LG CY+RLEFLGDAVLD L+T YL++ +
Sbjct: 1242 EM--LEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSH 1299
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE 1328
G+LTDLRS VNN+ FA VAV +F+ FL S +L + I YV+ + S +
Sbjct: 1300 KDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKV 1359
Query: 1329 --VKEG-PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRE 1385
+ +G P+ PKVLGD+VES GAILLD+ +L+ VW I L PI+ NL+L P RE
Sbjct: 1360 ELLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRE 1419
Query: 1386 LLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFS 1445
L+E C + + +G +A V + K+V + + RK+A AS L
Sbjct: 1420 LIEWCGKHGYFVGINCRDQGDTVVATLDV--QLKEVLLVRQGFSKKRKDAKAHASSLLLK 1477
Query: 1446 KLKAAGYV-----PKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQ 1500
L+ G + KT+ E S+ + +T + N + IS+P
Sbjct: 1478 DLEEKGLIIPKNASKTEQFEKHCGSTNPFNNLHVDAMDTQTPKPTKEKNAADSRNISDPL 1537
Query: 1501 GGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFD----------CCKEEGLSH 1550
+G P R LYELC W PT + C G S
Sbjct: 1538 ------LGKPLHVIVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSS 1591
Query: 1551 LK----LFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
K F F + + P +I G+ +A KK + + AA +L+ L+R G L
Sbjct: 1592 QKATPQAFAFASTITLHIPNADVISLTGDGRADKKSSQDSAALFLLYELQRRGTL 1646
>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
Length = 1445
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1458 (35%), Positives = 782/1458 (53%), Gaps = 104/1458 (7%)
Query: 47 GAQKTDKDPKQIA-RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK 105
G + D P + R YQ+E ++A +E+IIVYL TGCGKTH+AV+L+ +A LIRKP
Sbjct: 18 GEDEFDALPNVLTPRGYQIEALERAKKEDIIVYLETGCGKTHVAVMLLQHIADLIRKPST 77
Query: 106 SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQ 164
I +FL P+V LVQQQA+V++ FKV + G + + WE E++ E+ VM P
Sbjct: 78 RIAVFLCPSVPLVQQQARVVKRYTNFKVGEYYGEVNNNAWNSKAWEAELENTEIFVMTPA 137
Query: 165 ILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTA 222
ILL+ L+H F++M+ I LLIFDECHHA S+HPYA IM++FY K D+ ++PRI GMTA
Sbjct: 138 ILLHNLHHCFMRMDCIELLIFDECHHAH--SHHPYANIMQEFYHGKEDLYRLPRILGMTA 195
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTS 282
SP+ GK ++ I+ +E +L AK+++V+++ +L+ V P + Y
Sbjct: 196 SPINGKVNCQGDSIRTKIDKIERMLHAKLHTVKESSELDLVVPRPHHKSEYYESAQTPNP 255
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLEN 334
+ C + L ++++E + L + + L + K + +L +S+ +C
Sbjct: 256 VTLKFC-QLLFDLQKECIGTLLGTSGCEGELLGELCSGVEKKRVKNVKKLCNSLGYCATE 314
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQ-----ASEVFAAICRRDG 389
LG A A ILL ++ + +++ D L + + + EV A C
Sbjct: 315 LGPRCAYEAVKILLHKYDSDCDPELDSNSEGKKDMLRKILNALNSFLSKEVEATSCAVPD 374
Query: 390 IASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
A+++ + S K+ LI +L R M+CI+FV R +T R L+ +L +++
Sbjct: 375 GAANIQNL--------SSKVQLLINVLERCRDTNEMRCIIFVERKITTRVLASLLSSIEV 426
Query: 450 LA-SWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
L+ ++R L G N+G M+ ++++E FR+GE+N+LV+T V EEGLDIQ C LVIR
Sbjct: 427 LSPAFRFQSLAGKNSGSNDMNHKHQQNVVESFRNGEVNVLVSTNVAEEGLDIQNCHLVIR 486
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS- 567
FDLP T S IQSRGRAR +S +L + GN + ++ F E+ M E++ R +
Sbjct: 487 FDLPNTPCSLIQSRGRARCLKSTIIYLTERGNNEQSQRLEQFLLTEESMKEEVLSRIKNA 546
Query: 568 ---DAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
A S ++V+S+GA +S VSLLH+YC++L HD F+ P P+F Y +D G
Sbjct: 547 EDVGAPETSTIETFRVESTGATMSTLCSVSLLHQYCARLAHDSFYTPTPQFSYSEDGSGV 606
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND-YLLPQEDNATEDE 683
C I LP +A + + G P SS AK+ ACL A E L+ GAL + LL ++NA
Sbjct: 607 KCTIKLPTDALVQSVEGRPVSSQADAKRVACLIACERLYDAGALTELLLLKSKENA---- 662
Query: 684 PMLFSSDSDSYEGEGSRGE----LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADR 739
+S D+ + E + G ++VP +W V L+ Y + F+ P DR
Sbjct: 663 ---YSLDAIAPESNSTTGRDPLPSRSIIVPDAFSGTWGSGLNSVELHAYAISFVATPNDR 719
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE 799
Y FGLF+++ + EA ++V+L L+ R V K P G + + Q K R+
Sbjct: 720 AYVNFGLFLEADMGPEAGSIEVELQLSNRRLVNAKCSPCGTILFEPDQSTNAKS--SRAI 777
Query: 800 FNS---EFVPLGKDDYC-ESSSSTFYLLLPVIFHKN----SVDWKIIRRCLSSPVFGTPG 851
F+S + P+ + E +S+ YLLLP+ ++ S+DW I +S + G
Sbjct: 778 FSSVLDQKPPVPNIELSGEWNSNRLYLLLPLKEKQDALPLSIDWDCIEDLISDVMKGYNT 837
Query: 852 GSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATH--KKWFYLVTNIVFEKNGYSP--YK 907
+P L+L +G+ V NSL+ H K+ Y ++ + NG SP K
Sbjct: 838 LEEVPSEIPRSSLLRLIDGYFPVEHVTNSLIQTEHTGKRCLYCARELIPDMNGQSPMIMK 897
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE--EYFDD 965
S +S+ D+ + + L +QP+L+AKPL ++ NLL R + + E + E +
Sbjct: 898 VSKYNSYSDYYLKKHNRTLNFVEQPMLKAKPLIQVNNLLTQRTTSERPAAEEQKTESLVE 957
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
LP ELC++ + G S + + +SLLPS MHRLE LL+A++ + L + P + V A ++L
Sbjct: 958 LPLELCKIMVKGLSCALTNGISLLPSFMHRLEGLLLAVQFRKSLPS--PHSSPVPANLML 1015
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+A+TT KCQE FSLE LE+LGDAFL+ +V LFLLH+ +DEGEL++RR+N + N L +
Sbjct: 1016 EAITTSKCQESFSLEGLELLGDAFLEVSVSERLFLLHNRLDEGELSKRRTNLICNKMLER 1075
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
L + YIRD F P ++ GR +ET+ +
Sbjct: 1076 LGRERGIMNYIRDTQFSPKEWATPGR------VRETQCKLPP------------------ 1111
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
L KTIADV EAL+GA G +AA A + W+G +V +S L
Sbjct: 1112 ----LQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGCEVGVSSSIREEARTRVHGQLE 1167
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG-CYQRLEFLGDAVLDYLITSYL 1264
L + ++ LEILL ++F ++GLL++A H S R G CYQRL FLGDAVLD+LIT +
Sbjct: 1168 LLSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHSGDCYQRLGFLGDAVLDFLITKHF 1227
Query: 1265 YSVYPKLK--PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
Y+ LK PG LTDLRS VNN+ FA VAV + + +L+ +S+ L+ ++ YV T
Sbjct: 1228 YANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDKYVHGSTT 1287
Query: 1323 P----SSTREVKEGPRCP--KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFS 1376
S + + C +VL DLVES GA+ LDSG+ L+TVW + L P++ +
Sbjct: 1288 DVCALSEAFLLSKHLSCSSMQVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPLVTPA 1347
Query: 1377 NLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLA--EAKVTGKDKDVFISACATNLSRKE 1434
L+L PIREL ELC + P+ KK + + + VT + KD I+ K
Sbjct: 1348 TLRLEPIRELWELCQTEKFG--EPNYKKKREAMGDFDMTVTVELKDETITGVGRKPDEKS 1405
Query: 1435 AIRIASQQLFSKLKAAGY 1452
A ++A+ Q LK +
Sbjct: 1406 ARKVAAIQALETLKVKHF 1423
>gi|359475987|ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/1642 (33%), Positives = 847/1642 (51%), Gaps = 145/1642 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPTVALV 118
R YQ ++ + A N I L TG GKT IA++LI E+ ++ +K IFLAPTV LV
Sbjct: 47 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLV 106
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ KVI++S GF+V + G + S WEKEI +++VLVM PQILL L F+ +
Sbjct: 107 NQQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSL 166
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
E + L+I DECH A NHPY KIMK+FY + K P+IFGMTASPV+ KG S+ +
Sbjct: 167 ETVCLMIVDECHRA--TGNHPYTKIMKEFYHKSVDK-PKIFGMTASPVIRKGVSSSMDCE 223
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVIN-DTSSSYVTCSEQLAE 294
I+ LE++LD ++Y++ED +LE F+ S + R Y N D + + +
Sbjct: 224 NQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDN 283
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
+ S +++ L+ K+L+ H + +CL++LG+ A A + + E +
Sbjct: 284 LLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVKVCI---ENV 340
Query: 355 RNELIEAEGNTIDDSLCRFASQASEVFAAIC----RRDG--IASDLSCIEVLKEPFFSKK 408
N E E S C+ Q EV I DG + S+ ++ + + + + K
Sbjct: 341 SNAQEEFEFYRQSSSQCKCFLQ--EVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPK 398
Query: 409 LLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSM 468
L L+ + +F + + + C++FV RI+TA+ + ++ + +L+ + +L G N+ + ++
Sbjct: 399 LHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDAL 458
Query: 469 SRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP 528
+ A + LE FRSG++NLL AT V EEG+ + C VIRFDLP+TV S++QSRGRAR
Sbjct: 459 APKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQS 518
Query: 529 QSEYAFLVDSGN--QRE--LDLIKN-FSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSS 583
S++ +++ GN QR+ D+I++ +S + NR+ D + A+T E Y VDS+
Sbjct: 519 DSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRD-PDGYTLKAYTIEEMDSYFVDST 577
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIHQIVGT 642
GA ++A VSL+HRYC KLP D++F PKP F++F L G C + LP NA I+G
Sbjct: 578 GASVTADSSVSLIHRYCEKLPGDKYFTPKP-FFHFTYLEGMYECKLTLPPNAAFQTIIGP 636
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGE 702
+ +K+ CL+A + LH++GAL+D+LLP + +E++ ++ S S + G R E
Sbjct: 637 GNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKE 696
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
LH L +W Y + F + + +Y F L ++S L + +++++
Sbjct: 697 LHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDVGNIEME 756
Query: 763 LHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDR-------SEFNSEFVPL 807
L+L + V T + G +M+A +F E+F + R S EF+ L
Sbjct: 757 LYLI-SKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFL-L 814
Query: 808 GKDDYCESSSSTFYLLLPV----IFHKNS--VDWKIIRRCLSSPVFG------TPGGSVD 855
SSS YLLLP+ I S ++W I C S F + G D
Sbjct: 815 NTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMND 874
Query: 856 RKSLPSH-------------GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNG 902
PS + L N ++++N +V A H Y + ++V + +
Sbjct: 875 DTGNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSA 934
Query: 903 YSPYK---DSDSSSHV---DHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES 956
SP+ D +SS++ ++ + YGI L +P QPLL K NLL N ED+
Sbjct: 935 ESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQ 994
Query: 957 ------HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
+E + +PPEL L I + S LLPS++HRLE+L++A +L+ ++
Sbjct: 995 TGQKMLNEKAQTHVHMPPEL--LVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIA 1052
Query: 1011 ASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F G+++S+ ++L+A+TT +C E FS+ERLE+LGD+ LKYAV HLFL + EG+L
Sbjct: 1053 --FTTGSQISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQL 1110
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC--PRICSKETERTIHSQ 1128
+ RRS V NS L KL +LQ YIRD FDP ++ A G+R P CS + +
Sbjct: 1111 SARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVD-ALEVP 1169
Query: 1129 YDGR-APDDLNAEV--RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ 1185
DG+ +D V C +GH W+ KTIAD VEAL+GA+ G AA +KW GI
Sbjct: 1170 LDGKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGID 1229
Query: 1186 VEFEASQVTNICISS--KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG 1243
VE E S V ++ ++++P + +++ LE +G++F +GLLL+A H + LG
Sbjct: 1230 VELEPSLVDEAIATASLRTYIPKANEIEI--LESKIGYEFSVKGLLLEAITHATEQELGV 1287
Query: 1244 --CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKF 1301
CYQRLEFLGD+VLD LIT +LY + + PG+LTDLRS VNN++FA VAV ++ +
Sbjct: 1288 GYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQH 1347
Query: 1302 LIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
L S +L I Y Y+ + + PK LGDLVES GAIL+D+ NLN V
Sbjct: 1348 LQHCSGLLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEV 1407
Query: 1362 WKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDV 1421
W+I L PI+ L+L P+REL ELC+S ++ KG AE ++ D +
Sbjct: 1408 WRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLL 1467
Query: 1422 FISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPI 1481
C N + A+ QL L+ G I S S+ R G D +
Sbjct: 1468 VGEGCGRNKKAAKG--QAAAQLLKNLEKRG----------ISYSRSNSKRRKQGADLVGV 1515
Query: 1482 NVVAADDNVFEKLKISEPQGGSSC------------DIGSPSLTTGGLQNRSARSRLYEL 1529
+ S GG +C D + + ++ RS LYEL
Sbjct: 1516 SS-------------SLNMGGDACGQSNNEDSSENYDFVFAVIKSINMKKGGPRSSLYEL 1562
Query: 1530 CAANCWKPPTFDCCKE---------EGLSHLKLF-TFRVIVEIEAPE-KIIECIGEPQAK 1578
C W P+F+ ++ EG + F +F + + P ++EC G+ +A
Sbjct: 1563 CKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGDHRAD 1622
Query: 1579 KKGAAEHAAEGMLWCLEREGYL 1600
KK + + AA ML L+R G L
Sbjct: 1623 KKSSLDSAALVMLHELQRRGKL 1644
>gi|296081735|emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/1659 (33%), Positives = 849/1659 (51%), Gaps = 139/1659 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPTVALV 118
R YQ ++ + A N I L TG GKT IA++LI E+ ++ +K IFLAPTV LV
Sbjct: 47 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLV 106
Query: 119 QQ--------QAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYC 169
Q Q KVI++S GF+V + G + S WEKEI +++VLVM PQILL
Sbjct: 107 NQACFFFIFSQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDA 166
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L F+ +E + L+I DECH A NHPY KIMK+FY + K P+IFGMTASPV+ KG
Sbjct: 167 LRKAFLSLETVCLMIVDECHRAT--GNHPYTKIMKEFYHKSVDK-PKIFGMTASPVIRKG 223
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVIN-DTSSSYV 286
S+ + I+ LE++LD ++Y++ED +LE F+ S + R Y N D +
Sbjct: 224 VSSSMDCENQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLK 283
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+ + + S +++ L+ K+L+ H + +CL++LG+ A A +
Sbjct: 284 SSWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVKV 343
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC----RRDG--IASDLSCIEVL 400
+ E + N E E S C+ Q EV I DG + S+ ++ +
Sbjct: 344 CI---ENVSNAQEEFEFYRQSSSQCKCFLQ--EVLGIIGGYLPHGDGNYLNSESDILKAV 398
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
+ + + KL L+ + +F + + + C++FV RI+TA+ + ++ + +L+ + +L G
Sbjct: 399 DKGYITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTG 458
Query: 461 VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
N+ + +++ A + LE FRSG++NLL AT V EEG+ + C VIRFDLP+TV S++Q
Sbjct: 459 SNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQ 518
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT----SSDAFTCSEER 576
SRGRAR S++ +++ GN + D + + + E M +R + A+T E
Sbjct: 519 SRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMD 578
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAP 635
Y VDS+GA ++A VSL+HRYC KLP D++F PKP F++F L G C + LP NA
Sbjct: 579 SYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKP-FFHFTYLEGMYECKLTLPPNAA 637
Query: 636 IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYE 695
I+G + +K+ CL+A + LH++GAL+D+LLP + +E++ ++ S S +
Sbjct: 638 FQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGA 697
Query: 696 GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGE 755
G R ELH L +W Y + F + + +Y F L ++S L +
Sbjct: 698 GTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDD 757
Query: 756 AEHLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDR-------SEF 800
+++++L+L + V T + G +M+A +F E+F + R S
Sbjct: 758 VGNIEMELYLI-SKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGV 816
Query: 801 NSEFVPLGKDDYCESSSSTFYLLLPV----IFHKNS--VDWKIIRRCLSSPVFG------ 848
EF+ L SSS YLLLP+ I S ++W I C S F
Sbjct: 817 RREFL-LNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQL 875
Query: 849 TPGGSVDRKSLPSH-------------GPLQLHNGWSSESDVENSLVYATHKKWFYLVTN 895
+ G D PS + L N ++++N +V A H Y + +
Sbjct: 876 STGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILD 935
Query: 896 IVFEKNGYSPYK---DSDSSSHV---DHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR 949
+V + + SP+ D +SS++ ++ + YGI L +P QPLL K NLL N
Sbjct: 936 VVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNF 995
Query: 950 KLEDSES--------HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
E E+ +E + +PPEL L I + S LLPS++HRLE+L++
Sbjct: 996 NDEGGEALQTGQKMLNEKAQTHVHMPPEL--LVSIEVPITVLKSSYLLPSLIHRLESLML 1053
Query: 1002 AIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLL 1061
A +L+ ++ F G+++S+ ++L+A+TT +C E FS+ERLE+LGD+ LKYAV HLFL
Sbjct: 1054 ASQLREEIA--FTTGSQISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLK 1111
Query: 1062 HDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC--PRICSK 1119
+ EG+L+ RRS V NS L KL +LQ YIRD FDP ++ A G+R P CS
Sbjct: 1112 YPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSC 1171
Query: 1120 ETERTIHSQYDGR-APDDLNAEV--RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAAT 1176
+ + DG+ +D V C +GH W+ KTIAD VEAL+GA+ G AA
Sbjct: 1172 GVD-ALEVPLDGKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAAL 1230
Query: 1177 AFLKWIGIQVEFEASQVTNICISS--KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFV 1234
+KW GI VE E S V ++ ++++P + +++ LE +G++F +GLLL+A
Sbjct: 1231 HLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEI--LESKIGYEFSVKGLLLEAIT 1288
Query: 1235 HPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANV 1292
H + LG CYQRLEFLGD+VLD LIT +LY + + PG+LTDLRS VNN++FA V
Sbjct: 1289 HATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQV 1348
Query: 1293 AVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILL 1352
AV ++ + L S +L I Y Y+ + + PK LGDLVES GAIL+
Sbjct: 1349 AVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILI 1408
Query: 1353 DSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEA 1412
D+ NLN VW+I L PI+ L+L P+REL ELC+S ++ KG AE
Sbjct: 1409 DTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAEL 1468
Query: 1413 KVTGKDKDVFISACATNLS--------------RKEAIRIASQQLFSKLKAAGYVPKTKS 1458
++ D + C N K I + + + A V + S
Sbjct: 1469 RLQMIDVLLVGEGCGRNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGADLVGVSSS 1528
Query: 1459 L----ESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSC--DIGSPSL 1512
L ++ +S+ + + LI + + + + I+ ++C + +P +
Sbjct: 1529 LNMGGDACGQSNNEDSSELIKFHKKQKTTGM---QLCTRTSIANNCLENACKPKLDTPVI 1585
Query: 1513 TTGGLQNRSARSRLYELCAANCWKPPTFDCCKE---------EGLSHLKLF-TFRVIVEI 1562
+ ++ RS LYELC W P+F+ ++ EG + F +F + +
Sbjct: 1586 KSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSISL 1645
Query: 1563 EAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
P ++EC G+ +A KK + + AA ML L+R G L
Sbjct: 1646 HIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKL 1684
>gi|449489290|ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/1652 (33%), Positives = 828/1652 (50%), Gaps = 136/1652 (8%)
Query: 43 ESSVGAQKTDKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E SV + +++ + + I R+YQ+E+ + M N I LGTG GKT IAV+LI E+ +
Sbjct: 21 EPSVASDQSNFNVAEGFIPRRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAM 80
Query: 101 RKP-QKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYE 157
+ K + IFLAPTV LV QQ VI++ F+V + G G +C WEKE + +
Sbjct: 81 KSSSDKKLIIFLAPTVHLVHQQFNVIKDHTDFEVAEYYGAMGVDDWNMNC-WEKETSERD 139
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRI 217
VLVM PQILL L + ++ I L+I DECH A NHPY KIMK+FY K P+
Sbjct: 140 VLVMTPQILLDALRKAYFRLGTICLMIIDECHRAT--GNHPYTKIMKEFYHKSDSK-PKX 196
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV 277
FGMTASPV+ KG S+ + I LE++LDA+VY++ED +++E +V S Y P
Sbjct: 197 FGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIEDKKEVEIYVPSAKEICIFYEPA 256
Query: 278 INDTSSSYVTCSEQLAEIKREQYISALSRKLHDH-----QSLRNTTKQLNRLHDSMKFCL 332
+ T + + K + +S + H L+ K+L+ H + +CL
Sbjct: 257 MPQTME--LKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCL 314
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ LG+ A A +L + ++ NE E + +S ++ E I + +
Sbjct: 315 DELGIMCAYEAIKVLFE-NVSVPNE----ESDVYRESFLQYKHFLEEALLVIGESLSLEN 369
Query: 393 D------LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
+ + ++ + S KL L+ + +F + + + C++FV RI+ A + I++
Sbjct: 370 ENVPTLGFDLWKAVELGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANVIERIVKK 429
Query: 447 LKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
++ L+ + ++ G +A + +++ K LE F G+LNLL +T V EEGL + C V
Sbjct: 430 VENLSHFTVSYVTGCDASVGALAPKVQKETLELFCHGKLNLLFSTDVVEEGLHVPNCSFV 489
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN--QREL--DLIKNFSKEEDRMNREIM 562
+RFDLP+TV S++QSRGRAR S+Y L++ GN QR L D+I++ D +
Sbjct: 490 VRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDRSMTDAAMSRDL 549
Query: 563 DRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D F+ E Y V+++GA ++A V L+++YC KLP D++F+PKP F G
Sbjct: 550 DACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLSYGEG 609
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATED 682
C + LP A + IVG + +K+ CL+A + LH++GALND+LLP + +E
Sbjct: 610 SYECQLTLPPTAALQTIVGPSTRNSNLSKQLVCLEACKKLHQMGALNDHLLPSVEEISES 669
Query: 683 EPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYR 742
+ L S+ S S G R ELH L +W + Y F +Y
Sbjct: 670 DMGLKSNASTSRAGSTKRKELHGRTAIRALSGTWEEQVEGTTFQAYKFDFSCSVIYEVYS 729
Query: 743 EFGLFVKSLLPGEAEHLKVDLHLARGRSVMTK----------LVPSGIMQAQQFQEMFLK 792
F L ++S L + + +++L+L S M K L I +A+ FQE+F
Sbjct: 730 GFVLLIESKLDDDVSNFELELYLL---SKMVKASVSFGGEVHLDAEQITKAKCFQELFFN 786
Query: 793 VILDRSEFNSEFVP------LGKDDYCESSSSTFYLLLPVIFHKNS------VDWKIIRR 840
+ R S+ L KD SS YLLLPV +S + W+ I
Sbjct: 787 GLFGRLFIGSKTTGKKRDFLLQKDTNPLWISSNMYLLLPVDLPDDSTHDLWKIHWRAIDS 846
Query: 841 CLSSPVFGTPGGSVDRK----------SLPSHGP-----------LQLHNGWSSESDVEN 879
C+S F S+D + S PS + N +++
Sbjct: 847 CVSVVEFLKKNSSLDAERNYGAGAISDSSPSRNNSTETGSNAASVIHFANCVLDVHSLKD 906
Query: 880 SLVYATHKKWFYLVTNIVFEKNGYSPYKDS------DSSSHVDHLISSYGIHLKHPKQPL 933
+V A H Y + +V + SP+ + D + D+ YGI L PKQPL
Sbjct: 907 RVVLAIHTGRIYSIVEVVSNTSAESPFDGNSDKGPPDYITFADYFNKRYGISLSFPKQPL 966
Query: 934 LRAKPLFRLRNLLHN------RKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
LR K NLL N KL + + + +PPEL + + K + S
Sbjct: 967 LRLKQSHNPHNLLVNFKDEGFDKLPSGPAFKRPQMHVHMPPEL--VLSMDVPKGVLKSSY 1024
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
LLPS++HR E+L++A +L+ ++ +S+ ++L+ALTT E FSLERLE+LGD
Sbjct: 1025 LLPSLIHRFESLMLASQLRKEINY-HSNSLGISSSLILEALTTLGSCENFSLERLELLGD 1083
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LKYAV HLFL EG+L+ RR + N+ L L + LQ YIRD FDP ++
Sbjct: 1084 SVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSAFDPRRWV 1143
Query: 1108 ALG----RRCPRICSKET-ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
A G R P C +T E +H ++ P + + C KGH W+ KTIAD EAL
Sbjct: 1144 APGQCTNRPVPCKCGVDTVEVPLHDKFCTEDPKVVLGKC-CDKGHRWVVSKTIADCAEAL 1202
Query: 1163 VGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF--LPLSASLDMATLEILLG 1220
+GA+ D G AA +KW+GI V + + V + I+S S PL + ++ATLE +G
Sbjct: 1203 IGAYYVDGGIIAALHVMKWLGIDVNLDVALVVD-AITSASLRSCPLGDT-EIATLESKIG 1260
Query: 1221 HQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ F +GLLL+A H S +G CYQRLEFLGD+VLD LIT + Y Y + PG+LTD
Sbjct: 1261 YDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDPGELTD 1320
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKV 1338
LRS VNN+ FA VAV ++ + L S +L I YV Y+ T + G + PKV
Sbjct: 1321 LRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSESQDTGKPLHGNKGPKV 1380
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQ 1398
LGD+VES GAIL+D+ NL+ VWKI L P + L+L P+REL+ELC+S ++
Sbjct: 1381 LGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSLGYFIK 1440
Query: 1399 FPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKS 1458
+KG F AE ++ + +D + +RK A A+ +L ++L+ G + ++S
Sbjct: 1441 DKCTRKGETFHAELRL--QLQDSLLIGEGYERTRKAARGEAAHRLLAQLETRG-ISYSRS 1497
Query: 1459 LESILKSSPK-SEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGL 1517
K +P E+ ++ + A D NV + IG +L GG
Sbjct: 1498 GSKKRKQNPSHDESAMVLPSSVNCSTDACDPNVETPV------------IGPINLKKGG- 1544
Query: 1518 QNRSARSRLYELCAANCWKPPTFDCCKE---------EGLSHLKLF-TFRVIVEIEAPEK 1567
RS L+ELC W PTF+ + EGL K F +F + ++ P
Sbjct: 1545 ----PRSTLFELCKKLQWPMPTFNTVENKSRVQIEIGEGLEKRKGFNSFLSNITLQIPNA 1600
Query: 1568 -IIECIGEPQAKKKGAAEHAAEGMLWCLEREG 1598
+EC GE +A KK + + A+ ML L+++G
Sbjct: 1601 GYVECEGEARADKKSSFDSASLVMLQELQQQG 1632
>gi|330370549|gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/1635 (32%), Positives = 814/1635 (49%), Gaps = 129/1635 (7%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVALVQQ 120
YQL++ + A NII L TG GKT IAV+LI + I + K + IFLAPTV LV Q
Sbjct: 48 YQLQVYEVAKRRNIIALLDTGVGKTMIAVMLIKDFGQAIESTESKKLIIFLAPTVHLVNQ 107
Query: 121 QAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+I ES+ +V + G G C WEKE +++VLVM PQILL L F+ ++
Sbjct: 108 VCFLIRESLNLEVEQYYGAKGVDEWTLDC-WEKETKEHDVLVMTPQILLDALRKAFLSLD 166
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
+++L+I DECH A NHPYAKIMK+FY K P+IFGMTASPVV KG + N
Sbjct: 167 MVSLMIIDECHRAT--GNHPYAKIMKEFYHKSNNK-PKIFGMTASPVVSKGVLSSNNCDG 223
Query: 239 SINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKRE 298
++ LE +LD+ +Y++ED ++E+ V S + P SS + + + +K +
Sbjct: 224 QMSELECVLDSLIYTIEDRTEMEACVPSAKESCRFFDPA--QFSSLDLKAKVEASWLKTD 281
Query: 299 QYISALSRKLHDHQS-----LRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG--D 351
+S L L L+N K+L+ H + CL+NLG+ A A I L D
Sbjct: 282 GSLSNLQSSLQTSHKDMDDKLKNLRKRLSNDHAKVLHCLDNLGLICAYEAVNICLENILD 341
Query: 352 ETMRN----ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSK 407
T + E + N +++ CR + ++ + S ++ + + S
Sbjct: 342 TTEESKAYRESVLQYKNFLEEVQCRIGESL-----PLGDKNFLNSGFDYLKAVDLGYISP 396
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
KL L+ + +F + + C++FV RI+TA+ + + + L+ + ++ G N + S
Sbjct: 397 KLHELLQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDS 456
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
++ K LE FRSG++NLL T V EEG+ + CC VIRFDLP+TV S++QSRGRAR
Sbjct: 457 LAPKIQKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQ 516
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT-SSDA-----FTCSEERIYKVD 581
SE+ +++ GN ++ + + + + E M + R SD T E ++ VD
Sbjct: 517 NNSEFIMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVD 576
Query: 582 SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVG 641
++GA ++A VSL+H+YC KLP D+++ PKP F + G C + LP NA + IVG
Sbjct: 577 ATGASVTADSAVSLIHKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVG 636
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEG----E 697
P + AK+ CL+A + LH++GAL+D+L P + +E+ + DS + G
Sbjct: 637 PPSRNSHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGAGT 696
Query: 698 GSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAE 757
R ELH L SW + Y F + +Y F L ++S L +
Sbjct: 697 TKRKELHGTTCIQALCGSWGEKSDDAVFFAYKFDFKCNIITVVYSGFVLLIESKLADDVG 756
Query: 758 HLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNS------- 802
+ ++DL L G+ V + G +M+A++FQE F + + S
Sbjct: 757 NTEMDLFLI-GKMVKASVSSCGQVRLNAEQMMKAKRFQEFFFNGLFGKLFVGSKSSGAPR 815
Query: 803 EFVPLGKDDYCESSSSTFYLLLPVIFHKNSVD-----WKIIRRCLSSPVF-------GTP 850
EF+ K S S YLLLP+ NS D W I C + F GT
Sbjct: 816 EFLLRDKTSSLWSPSR-MYLLLPL--EDNSTDELRIHWPGITACTLAAEFLNKNSLLGTE 872
Query: 851 ----GGSVDRKSLPSHGP----------LQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
GGS SL S G ++ N + + N++V A H Y +
Sbjct: 873 QSDDGGS--NPSLNSTGSPVTDCKETNIIRFANSSVDANSLRNTVVLAIHTGRIYCIIEA 930
Query: 897 VFEKNGYSPYKD------SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRK 950
V +K S + + S+ ++ ++ Y I LKHP QPL+ K NLL N
Sbjct: 931 VSDKTAESSFAETVDTVSSEFANFYEYFYKKYNIVLKHPGQPLMLLKQSHNPHNLLVNFN 990
Query: 951 LEDSES--------HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
E + +E + +PPEL L ++ + SL LLPS+MHRLE+L++A
Sbjct: 991 DEGVSAKASQAGVVNEKPRFHVHMPPEL--LLVLDVPVSVLKSLYLLPSLMHRLESLMLA 1048
Query: 1003 IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH 1062
+L+ ++ ++ + M+L+ALTT +C E FS+ERLE+LGD+ LKYAV HLFL +
Sbjct: 1049 NQLREEINFC-SSNIDIPSSMILEALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRY 1107
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC----PRICS 1118
EG+L+ RRS AV NS L KL + +Q YIRD FDP ++ A G+R P C
Sbjct: 1108 PNKHEGQLSARRSLAVCNSTLHKLGTDHKIQGYIRDSAFDPRRWVAPGQRVLRPVPCKCG 1167
Query: 1119 KET-ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
++ E + ++ P + C +GH WL KTI+D VEAL+GA+ G AA
Sbjct: 1168 VDSLEVPLDKKFQTEDPK-VKVGKSCDRGHRWLCSKTISDCVEALIGAYYLSGGLVAALH 1226
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+KW+GI E + V + I+ S + ++ +E +G+ F + L +A H S
Sbjct: 1227 VMKWLGIDAELDPLVVAEV-INQASLRTYVPNYEIHMIESKVGYNFSVKFFLQEALTHES 1285
Query: 1238 FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS 1297
+ CYQRLEFLGD+VLD LIT YLY+ + + PG+LTDLRS VNN+ FA VAV
Sbjct: 1286 LHE-SYCYQRLEFLGDSVLDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHD 1344
Query: 1298 FYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
+K L S +LS I+ YV +T + + PK LGDLVES +GAIL+D+ N
Sbjct: 1345 LHKHLQHCSTLLSNQISEYVQSFTESDNTTRLDPSIKGPKALGDLVESIVGAILIDTNLN 1404
Query: 1358 LNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
L+ VW+I+ L PI+ L+L P REL ELC+S ++ KG AE +
Sbjct: 1405 LDKVWRIVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCKNKGEVVHAELLLQLD 1464
Query: 1418 DKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYD 1477
+ + SRK A A+ L L+ G + + K + SS E D
Sbjct: 1465 HDLLV--GEGFDRSRKVAKGKAASCLLKDLENRG-ISRKKRKHDCVDSSQTME------D 1515
Query: 1478 ETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKP 1537
++ + E + E + S +P + T + R+ L+ELC W
Sbjct: 1516 DSLEPTIPKRQRRAEIQLLDESKKACSATPATPVIVTVKTKKGGPRTTLFELCKKLLWPM 1575
Query: 1538 PTFDCCKEEGLSHLKL------------FTFRVIVEIEAPEKIIECIGEPQAKKKGAAEH 1585
P+ + + + +++ F ++I+ + + IIEC G+ +A KK +++
Sbjct: 1576 PSIKATEHKSSAPMEIGEGPERKKGFISFVSKIILNVPGYD-IIECTGDAKADKKSSSDS 1634
Query: 1586 AAEGMLWCLEREGYL 1600
AA ML+ LE+ G L
Sbjct: 1635 AALFMLYELEQRGKL 1649
>gi|242059623|ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/1682 (32%), Positives = 849/1682 (50%), Gaps = 170/1682 (10%)
Query: 42 AESSVGAQKTDKDPKQ-------IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY 94
+ SS +TDK +Q R+YQL++ + AM +N I L TG GKT IAV+LI
Sbjct: 8 SNSSPPEDETDKHKRQKRECQDFTPRRYQLDVYEVAMRQNTIAMLDTGAGKTMIAVMLIK 67
Query: 95 ELAHLIR-KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEK 151
+ + + + IFLAPTV LV QQ +VI+ F+V + G G + K+H W++
Sbjct: 68 HFGKISKANNDRKLIIFLAPTVQLVTQQCEVIKSYTDFEVEHYHGAKGVDQWKAH-SWQQ 126
Query: 152 EIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI 211
+ +Y+V+VM PQ+LL L F+ +++++L+IFDECHHA NHPY +IMK+FY
Sbjct: 127 QFLKYQVMVMTPQVLLDALRQAFLILDMVSLMIFDECHHAT--GNHPYTRIMKEFYHGSE 184
Query: 212 MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VV 269
K P +FGMTASP++ KG S+ + ++ LEN+LD+K+++V D E++E V S V
Sbjct: 185 HK-PNVFGMTASPIIRKGVSSDLDCENQLSELENILDSKIHAVVDREEIELCVPSAKEVN 243
Query: 270 RVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQS---------LRNTTKQ 320
R Y+ V S+ SE+L EI +Y L +LH+ + + + ++
Sbjct: 244 RYYEPRTV------SFEDLSEEL-EILCSKY-DGLIVQLHNRSTNQYKDADEITKESRRR 295
Query: 321 LNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTID-----DSLCRFAS 375
L++ + +CLE+ G+ A A+ I + + R ++ +T D + FA
Sbjct: 296 LSKSLAKICYCLEDAGLLCASEATKICI--ERGQRKGWLKGGSDTTDQQSDPNGPILFAE 353
Query: 376 QA-------SEVFAAICRR--DGI----ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQ 422
+ EV I +R GI S+ C+E K + S KL L+ + +F
Sbjct: 354 ISMLHMKFFQEVLDIIDKRLQQGIDALLNSESGCVEAAKMGYISPKLYELMRVFLSFSDS 413
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRS 482
+++C++FV+R ++AR + ++ + L+ +R FL G ++ + +++ K L+ FRS
Sbjct: 414 DNVRCLIFVDRKISARVIERTMKKIGRLSCFRVSFLTGGSSSVDALTPKMQKDTLDSFRS 473
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
G++NLL T V EEG+ I C VIRFDLP T S++QSRGRAR S+Y +++ GN +
Sbjct: 474 GKVNLLFTTDVAEEGIHIPDCSCVIRFDLPRTTRSYVQSRGRARQRDSQYILMIEKGNVK 533
Query: 543 ELDLIKNFSKEEDRMNREIMDRTSSDA----FTCSEERIYKVDSSGACISAGYGVSLLHR 598
+ DLI + + M +R D+ F E Y + ++GA I+ +S+L++
Sbjct: 534 QSDLISRIMRSKTSMTEIASNREPEDSHRNFFPIEEINEYHISTTGAKITTDSSISVLNQ 593
Query: 599 YCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
YC KLP D+++ P+P F + G C + LP++A +VG +M+ AK+ CL A
Sbjct: 594 YCDKLPKDKYYTPRPTFQFTHYGDGYECTVTLPSSAMFQLLVGPKARNMQKAKQLVCLDA 653
Query: 659 IEDLHKLGALNDYLLPQEDNATEDEPM-LFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT 717
+ LH+LGAL+D+L P + E+ P+ + S S S G R ELH + SW
Sbjct: 654 CKRLHQLGALDDHLSP----SVEETPLEISSKSSISTSGTTKRKELHGTTKVLSMSGSWG 709
Query: 718 KSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVP 777
+ +L Y + F+ D D+ Y +F L + + + EA L +DL+L + V + P
Sbjct: 710 SDKSVTKLQGYKLNFVCDQVDQKYCDFVLLIDTSIAKEAATLNIDLYL-HDKMVKASVSP 768
Query: 778 SG-------------IMQAQQFQEMFLKVILDR--SEFNSEFVPLGKDDYCESSSSTFYL 822
G + QA F +F K+ + S+ EF+ L KDD + YL
Sbjct: 769 CGPLELDARQMEKTKLFQALLFNGLFGKLFIGSKASKTPREFI-LKKDDAFLWNKENMYL 827
Query: 823 LLPVIFHKNS-----VDWKIIRRCLSSPVFGT-----PGGSVDRKSLPSHGP-----LQL 867
LLPV ++S ++W I+ +++ G G + K +H ++L
Sbjct: 828 LLPVDSTQDSHKSVCINWSIVD--IAATTVGLMRSIYSDGKHNLKDKLNHEKNDENFIRL 885
Query: 868 HNGWSSESDVENSLVYATHKKWFYLVTNIV-----FEKNGYSPYKDSDSSSHVDHLISSY 922
N D++N +V A H Y V + + +G S K++ + ++ Y
Sbjct: 886 ANKSCKADDLKNMVVLAIHTGKIYTVLKVSDLCANSKFDGTSDKKEAKFQTFAEYFEKKY 945
Query: 923 GIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDS----------ESHELEEYFDDLPPELCQ 972
I L HP QPLL KP NLL ++ ++ E+ +PPEL
Sbjct: 946 NIFLCHPLQPLLVLKPTHNPHNLLSSKNRDEGIILFFVGNVVENKNRANSLVHMPPEL-- 1003
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
L + D+ L PS+MHRLE+L++A +L+ ++ + +++S+ ++L+A+TT +
Sbjct: 1004 LIPLDLPVDVLRVFYLFPSLMHRLESLMLASQLRSEIAYT---DSDISSFVILEAITTLR 1060
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
C E FS+ERLE+LGD+ LKYAV HLF+ EG+L+ RR + N+ L +L +
Sbjct: 1061 CCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLGTERRI 1120
Query: 1093 QVYIRDQPFDPCQFFALG----RRCPRICSKETERTIHSQYDGRAPDDLNAEV--RCSKG 1146
Q YIRD FDP ++ A G R CP C ++E D DD + + C KG
Sbjct: 1121 QGYIRDAAFDPRRWLAPGQLSSRPCPCECPVKSEVITE---DIHRIDDKSIIIGKACDKG 1177
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS--KSFL 1204
H W+ KTI+D VEA++GA+ + G KAA A LKW+ I+ E Q+ S+ +++L
Sbjct: 1178 HRWICSKTISDCVEAIIGAYYVEGGLKAAFAVLKWLQIET-LEEEQIMEALSSASVRNYL 1236
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITS 1262
P ++ LE LG+ F +GLL++A HPS G CYQRLEFLGDAVLD LIT
Sbjct: 1237 PKVDVVEF--LEAKLGYTFQVKGLLIEALTHPSQQESGATYCYQRLEFLGDAVLDILITR 1294
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
+L+ + G+LTDLRS VNN+ FA VAV + ++FL S L + I YV+ +
Sbjct: 1295 HLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYVNSLEG 1354
Query: 1323 PSSTRE--VKEGP-RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ 1379
S R + GP R PKVLGD+VES GAIL+DS +L+ VW++ L PI+ NL+
Sbjct: 1355 SSMDRTSLLSSGPSRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFKPLLSPIVTPENLE 1414
Query: 1380 LNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIA 1439
L P REL E C+ + +G K A + KD + C N + +A A
Sbjct: 1415 LPPFRELNEWCDKNGYFIGIKCENRGDKTTAILSLQLKDLLLVRQGCGKN--KIDAKAHA 1472
Query: 1440 SQQLFSKLKAAGY-VPKTKS-LESILKSSPKSEARLIGYDETPINVVAADD--NVF---- 1491
+ L L+ G +PK S +E K+S G N+V D NV
Sbjct: 1473 ASLLLRDLEEKGLIIPKNASRVEQFEKNS--------GTRNHCNNLVDVMDTQNVAPPRQ 1524
Query: 1492 EKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHL 1551
++L +S GS D P + L R LYE C W P F+ K E +
Sbjct: 1525 KELPVSSTAPGSVLD--KPLVVKVKLSKGGPRVSLYESCKKLQWPMPMFEFVKVEPKNIS 1582
Query: 1552 KL--------------FTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
+ F + + P II G+ +A KK + + AA ML+ L+R
Sbjct: 1583 VCSSSGDSSQKVAPQGYAFASTITLHIPNGDIISLTGDGRADKKSSQDSAALLMLYELQR 1642
Query: 1597 EG 1598
G
Sbjct: 1643 RG 1644
>gi|356509849|ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 1671
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/1646 (32%), Positives = 815/1646 (49%), Gaps = 158/1646 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVALV 118
R+YQ+E+ + A N I L TG GKT IAV+L+ E+ I+ K + IFLAPTV LV
Sbjct: 67 RRYQIEVYEVARRRNTIAVLDTGSGKTLIAVMLMKEVGQAIKTSGVKKLIIFLAPTVHLV 126
Query: 119 QQQAKVIEESIGFKVRTFCGG----SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
QQ K I+ F+V + G + LK+ WEKEI +VLVM PQILL L F
Sbjct: 127 NQQFKNIKFLTDFQVEEYYGAKGVDTWTLKT---WEKEISNNDVLVMTPQILLDALRKAF 183
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
++ME+I L++ DECH + NHPY KIMK+FY K P+IFGMTASPV KG S+
Sbjct: 184 LRMEMICLIVIDECH--RTIGNHPYTKIMKEFYHQANEK-PKIFGMTASPVGKKGVSSTM 240
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
+ I+ LE++LD++ Y+VED +++ V S Y D + + E
Sbjct: 241 DCEDQISELESILDSQRYTVEDRTEMDRCVPSAKESCRYY-----DQARFSALSLKPKIE 295
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLN-RLHDSMK---FCLENLGVCGALHASYILLSG 350
++ + LS +++ + N K L+ R+ + + CLE+LG+ A A I
Sbjct: 296 ALSFKFDALLSENQSNYKDVENKFKTLSQRMSNELAKILHCLEDLGILCAYEAVKICHEN 355
Query: 351 DETMRNEL-IEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
E I +G + + E + + + D + + + S KL
Sbjct: 356 FSKSEGECEIYRKGYLQCITFLEEVIKLIEESLHLADKKILEVDFNYSQAEDLGYISPKL 415
Query: 410 LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMS 469
+ LI + +F + C++FV+RI+TA+ + + + ++ + +L G N + +++
Sbjct: 416 IELIKLFQSFGESSQVLCLIFVDRIITAKVIQRFAKTVPNISHFTVSYLTGNNTSVDALA 475
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
K IL+ FRSG++NLL T V EEG+ + C VIRFDLP+TV S++QSRGR+R
Sbjct: 476 PKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQAN 535
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRM-NREIMDRTSSDAFTC--SEERIYKVDSSGAC 586
S++ +++ GN ++ D + + + E M + I S C + Y V+S+GA
Sbjct: 536 SQFVVMLERGNLKQRDQLFDIIRSERSMTDASIYKEHESSLRACMVGKTNAYYVESTGAS 595
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
+ VSL+HRYC LP D++ KP F + GG C +ILP+N+ I+G
Sbjct: 596 FTLDSSVSLIHRYCGTLPRDKYSCVKPNFEFLSVEGGYQCKLILPSNSAFQTIIGPSGKD 655
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
M AK AC +A + LH++GALN++L+P ++++ED+ ++ + +S S G R ELH
Sbjct: 656 MRLAKHLACFEACKKLHQMGALNEHLVPLIEDSSEDDHIVKNKESSSGAGTTKRKELHGK 715
Query: 707 LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
L +W V+ N Y +F + IY F L ++S L + ++ +DL+L
Sbjct: 716 ANIHALSGAWGDKLTRVKFNAYKFEFTCNIVSEIYSGFALLIESELDEDVGNVNLDLYLV 775
Query: 767 RGRSVMTKLVPSG--------IMQAQQFQEMFLK------VILDRSEFNSEFVPLGKD-- 810
+ V + G +M+A+ F E+F V+ +S EF+ L KD
Sbjct: 776 -SKIVKASVSSCGQVDLDAEQMMRAKCFHELFFNGLFGRLVLKSKSAGEREFL-LQKDTN 833
Query: 811 ------------------DYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVF----- 847
D CE S ++W I C S+ F
Sbjct: 834 SLWSPKHLYLLLPLEKLNDICEGSL--------------QINWCGINSCASAIKFLRRKF 879
Query: 848 ----------GTPGGSVDRKS--LPSHGPLQLH--NGWSSESDVENSLVYATHKKWFYLV 893
GT D S + G ++H N ++++ +V A H Y +
Sbjct: 880 SLVTGDCDDNGTITSPHDTSSSEMECVGANKIHFANCVVDADNIKDRVVLAIHTGKIYCI 939
Query: 894 TNIVFEKNGYSPY-----KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHN 948
I + SP+ K +S + D+ SYGI L+HP QP+LR K NLL N
Sbjct: 940 IEIDSNLSAESPFYGNNEKSKESITFSDYFSKSYGISLRHPGQPMLRLKQSHNPHNLLFN 999
Query: 949 RKLEDSESH------ELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
ED S +L + +PPEL L I+ +D+ SL LLPS+M+R+E+L+++
Sbjct: 1000 FYEEDKSSKIGPAASKLPVHV-HIPPEL--LYILDVKRDVLKSLYLLPSLMYRIESLMLS 1056
Query: 1003 IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH 1062
+L+ + + + + ++L++LTT +C E FS+ERLE+LGD+ LKY V HLFL +
Sbjct: 1057 SQLREEIDGQTSK-FNIRSSLILESLTTLRCSESFSMERLELLGDSVLKYVVSCHLFLKY 1115
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI----CS 1118
EG+L+ RRS+AV NS L KL LQ YIRD F+P ++ A G+R + C
Sbjct: 1116 PKKHEGQLSARRSSAVCNSTLHKLGTDRKLQGYIRDSAFEPRRWVAPGQRSIHLVCCDCG 1175
Query: 1119 KET-ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
ET E + +++ P + + C +GH W+ KTIAD VEAL+GA+ D G A+
Sbjct: 1176 LETLEVPLDAKFHTEDPKVVVGKF-CDRGHCWMCSKTIADCVEALIGAYYVDGGLFASLN 1234
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+KW+GI E E S V ++ L ++A+LE +G++F +GLLL+A H S
Sbjct: 1235 VMKWLGIGAELELSLVDEAITAASLRTCLPKESEIASLEKKIGYEFSVKGLLLEAITHLS 1294
Query: 1238 FNRL--GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
L G CY+RLEFLGD+VLD LIT +LY + + PG LTDLRS VNN FA VAV
Sbjct: 1295 EKELGIGCCYERLEFLGDSVLDLLITWHLYQSHTDIDPGVLTDLRSASVNNDNFAQVAVR 1354
Query: 1296 QSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
+ ++ L+ S +L I+ YV +I+ S R + PK LGD+VES +GAIL+D+
Sbjct: 1355 HNLHQHLLHSSGLLLSQISEYVK-VISESDPRSLP-SISAPKALGDVVESIVGAILIDTK 1412
Query: 1356 FNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNS--YDLDLQFPSLKKGGKFLAEAK 1413
+L+ VW + S L PI+ L+L P REL ELC+S Y + ++ K G E
Sbjct: 1413 LSLDQVWNVFYSLLSPIVTPDKLELPPFRELNELCDSLGYFVKVKENCEKVGSAMHVEVS 1472
Query: 1414 VTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARL 1473
V + + N +K A K +AA Y+ K + I S S+
Sbjct: 1473 VQLPNALLVREGKGAN--KKTA----------KGEAAFYLLKDLEKQGISHGSFMSK--- 1517
Query: 1474 IGYDETPINVVAA-----DDNVFEKLKISEPQGGSSCDIGSPSLTTGGL----QNRSARS 1524
G + P +V + D ++ + SEP + +LT L + R+
Sbjct: 1518 -GKRDNPDHVYGSSHLKMDSSILIEEHSSEPASHKRHILDETNLTAINLSINMKKGGPRT 1576
Query: 1525 RLYELCAANCWKPPTFD------------CCKEEGLSHLKLFTFRVIVEIEAPEKIIECI 1572
LYE+C W PTFD C +G F ++ + I IE
Sbjct: 1577 TLYEVCKKLQWPVPTFDSTEYKDRSLFESCEGLQGSKGQNCFVSKITLCIPNYGN-IESK 1635
Query: 1573 GEPQAKKKGAAEHAAEGMLWCLEREG 1598
GE ++ KK + + AA ML L+R G
Sbjct: 1636 GEARSDKKTSFDSAAVQMLLELQRLG 1661
>gi|302819693|ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
gi|300140718|gb|EFJ07438.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
Length = 1719
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/1413 (33%), Positives = 734/1413 (51%), Gaps = 144/1413 (10%)
Query: 35 VSGVGFGAESSVGAQKTDKDPKQIAR-KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI 93
VS GF A + D ++ R YQ ++ ++A++ENIIV LGTG GKT IA++LI
Sbjct: 331 VSTRGFWRHGLREAGQDDDPARRKWRCSYQKDVFQRALKENIIVNLGTGTGKTMIAIMLI 390
Query: 94 YELAHLIRKPQ-KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHC--DWE 150
+ PQ K I +FLAPTV LV QQA+ IE KV + G K + S W+
Sbjct: 391 QSFEERLSMPQEKRIAVFLAPTVNLVIQQARAIESFTVLKVGDYYG-DKGVDSWSVNQWQ 449
Query: 151 KEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD 210
E+D ++VLVM PQ+ L L +K+E + +L+ DECHHA NHPYA IMK Y
Sbjct: 450 AEVDSHQVLVMTPQVFLNALGTSALKLEFVEVLVMDECHHAH--KNHPYALIMKTHYHVS 507
Query: 211 IMKV-PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVV 269
+K P+IFGMTASPV+ KG S+ + + + LE++LDAKVY+VED ++E + +P
Sbjct: 508 CLKSKPKIFGMTASPVIQKGVSSSYDCNRKLTVLESILDAKVYTVEDKSEVEEYYPNPT- 566
Query: 270 RVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK 329
QY + + + +L EI +++ S + D++ K ++RLH S+
Sbjct: 567 ---QYKEYYDRPKQRFSSIQTEL-EILKDRLNSEAACNCSDYELQNKIKKSIDRLHLSIN 622
Query: 330 FCLENLGVCGALHASYILLSGDETMRNEL----IEAEGNTIDDSLC-RFASQASEV--FA 382
CL +LG+ AL A IL + +++ + + E + SL RF S + F+
Sbjct: 623 HCLVDLGLLPALLAVEILQNRNKSTFHSKWKPDVSLEEEEVKTSLKERFLQNVSSIPRFS 682
Query: 383 AICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSY 442
+ R +E + S K+L L+ +L R +M+CIVFV R++ A AL+
Sbjct: 683 QVSSRS-----YPTLEEMTSGTLSPKVLVLLDVLERLRGITNMRCIVFVERVIVAMALAK 737
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKS--ILEKFRSGELNLLVATKVGEEGLDI 500
++ L FL+ RC ++ GV + +RN + +L+ F G+LNLL+AT V EEGLD+
Sbjct: 738 LISRLSFLSHLRCDYMTGVR---DTDARNPTQQQEVLDAFAGGKLNLLIATSVAEEGLDV 794
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMP-QSEYAFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q CC VIRFD+ +T+ S +QSRGRAR S Y +L+++GN +L+L
Sbjct: 795 QACCAVIRFDVCQTLRSHVQSRGRARNRLSSTYVWLLETGNVEQLNLFNQL--------- 845
Query: 560 EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
C+ ER+ + S VS +H YC++L D ++N KPKF + D
Sbjct: 846 ------------CTSERVVEDQDS---------VSFIHEYCARL-GDRYYNAKPKFSFKD 883
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN-DYLLPQEDN 678
+C + P NAP+ + G + + + AKK ACL+A L+ +G + D L P D+
Sbjct: 884 SF---VCTVEFPPNAPLRSVEGPLRRTEQLAKKAACLQACRKLYDMGEVRPDTLCPDVDD 940
Query: 679 ATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPAD 738
E++ + ++S G R E+ P + SW ++ V+L FY + F+ +P +
Sbjct: 941 FDEEDQSMRKNES------GKRKEIFSTAKPLIFEGSWVFNESGVQLQFYKICFVIEPPE 994
Query: 739 -RIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQ--------AQQFQEM 789
R Y FG V ++ E +V L +R R V ++ G +Q A+ +QE+
Sbjct: 995 SRTYSNFGFLVNCVIDAEVTDSEVTL-FSRNRVVNARVHRVGPIQLDANQVKAAKAYQEL 1053
Query: 790 FLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR------RCLS 843
L +R S G + S +LLLPV +S+DW + R L
Sbjct: 1054 LLNGAFNRLARCS-----GSPQEILWNKSQAFLLLPVHDDNDSIDWTSVHATAGVYRTLC 1108
Query: 844 S---PVFGTPGGSVDRKSLPSHGP-LQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-- 897
S P G V K+ H L NG+ S +++ +V H + VT ++
Sbjct: 1109 SNFSPSSPMDGDGVGEKT---HADVLCTANGYVHSSALQDMVVATVHNGRLFCVTGVLEN 1165
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESH 957
F P + +++D+ Y L+ P+QPLL+AKP NL K + E
Sbjct: 1166 FTAASLLPKR---GFTYIDYYKDKYQRTLRLPEQPLLKAKPTHAFHNLPIRPK--EQEGS 1220
Query: 958 ELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA 1017
EE F +LPPELC + + SL +PS +HR + + AI+L+ L P
Sbjct: 1221 RQEESFVELPPELCL--CLEIKSGLIRSLYFVPSFLHRFTSTVCAIQLRSPLWPWIP--- 1275
Query: 1018 EVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNA 1077
A +L+A+T++KC E FS E LE+LGD+FLKY V + LFL++D EG+L+ RRS A
Sbjct: 1276 ---AAKILEAITSKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRSRA 1332
Query: 1078 VNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDL 1137
N+ L +LA + + YIRD+ F+P + P + + ++ + H Q G ++
Sbjct: 1333 TCNAALHQLAKSSGIAEYIRDEEFNPSNWTG-----PGMLTSDSSKCRHQQ--GSYENEE 1385
Query: 1138 NAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA---SQVT 1194
N C+ GH + +K +ADVVEAL+GA++ SG +A +K +GI +EF+ +
Sbjct: 1386 NYFSSCANGHRGIRRKALADVVEALIGAYLATSGPPSAMELMKQLGIDIEFDIGLLASAR 1445
Query: 1195 NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDA 1254
+ ++SF L ASL+ +LE L ++F +R LL++A H S CYQRLEFLGD
Sbjct: 1446 QASLPAESFQHLQASLE--SLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQRLEFLGDG 1503
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
VLD+L++ +L+ +P L PG LTDLRS VNN+ FA + + ++ L S L I
Sbjct: 1504 VLDFLVSRHLFETHPGLPPGTLTDLRSAAVNNKWFARLVLRHGLHQHLQHGSVELDCEIR 1563
Query: 1315 NYVDYMITPSSTREVKEGP--------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
+V + VKE P PKVLGDL+ES GAI +D+ F+L +W+++L
Sbjct: 1564 KFV---------QNVKEKPDASCFEDLSAPKVLGDLLESITGAIFVDTNFDLEKLWRVVL 1614
Query: 1367 SFLDPILKFSNLQLNPIRELLELCNSYDLDLQF 1399
L P++ + L+ +P+R L+ELC + + F
Sbjct: 1615 PLLSPLVTPATLRFHPVRILMELCARKGMKVSF 1647
>gi|302794558|ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
gi|300153361|gb|EFJ20000.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
Length = 1686
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1364 (34%), Positives = 716/1364 (52%), Gaps = 121/1364 (8%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVA 116
I R YQ ++ ++A++ENIIV LGTG GKT IA++LI + PQ K I +FLAPTV
Sbjct: 354 IPRGYQKDVFQRALKENIIVNLGTGTGKTMIAIMLIQSFEDRLSMPQEKRIAVFLAPTVN 413
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC--DWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQA+ IE KV + G K + S W+ E+D ++VLVM PQ+ L L
Sbjct: 414 LVIQQARAIESFTVLKVGDYYG-DKGVDSWSVKQWQAEVDSHQVLVMTPQVFLNALGTSA 472
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-PRIFGMTASPVVGKGASAQ 233
+K+E + +L+ DECHHA NHPYA IMK Y +K P+IFGMTASPV+ KG S+
Sbjct: 473 LKLEFVEILVMDECHHAH--KNHPYALIMKTHYHVSCLKSKPKIFGMTASPVIQKGVSSS 530
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ + LE++LDAKVY+VED ++E + +P QY + S+ + L
Sbjct: 531 YDCNCKLTVLESILDAKVYTVEDKSEIEEYYPNPT----QYKEYYDRPKQSFSSIQTDL- 585
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
EI +++ S + +++ K ++RL S+ CL +LG+ AL A IL S +++
Sbjct: 586 EILKDRLNSEAACNCSEYEQQNKINKSIDRLLLSINHCLVDLGLLPALLAVEILKSRNKS 645
Query: 354 M----RNELIEAEGNTIDDSLC-RFASQASEV--FAAICRRDGIASDLSCIEVLKEPFFS 406
+ E + SL RF S + F+ + R +E + S
Sbjct: 646 TFHLKWKPDVSLEEEEVKTSLKERFLQNVSSIPRFSQVSSRS-----YPTLEEMTSGTLS 700
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK 466
K+L L+ +L R +M+CIVFV R++ A AL+ ++ L FL+ RC ++ GV
Sbjct: 701 PKVLVLLDVLERLRGMTNMRCIVFVERVIVAMALAKLISGLSFLSHLRCDYMTGVR---D 757
Query: 467 SMSRNAMKS--ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
+ +RN + +L F G+LNLL+AT V EEGLD+Q CC VIRFD+ +T+ S +QSRGR
Sbjct: 758 TDARNPTQQQEVLHSFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSHVQSRGR 817
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD----AFTCSEERIYKV 580
AR S Y +L+++GN +L+L E + +++ R D A + ++V
Sbjct: 818 ARNLLSTYVWLLETGNVEQLNLFNQLCTSERVVEDQVIFRNYMDITREAPPEGDLEFFRV 877
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV 640
+ SGAC S+ VS +H YC++L D ++N KPKF + D +C + P NAP+ +
Sbjct: 878 E-SGACKSSQDSVSFIHEYCARL-GDRYYNAKPKFSFKDSF---VCTVEFPPNAPLRSVE 932
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGAL-NDYLLPQEDNATEDEPMLFSSDSDSYEGEGS 699
G + + + AKK ACL+A L+ +G + D L P D+ E++ + ++S G
Sbjct: 933 GPLRRTEQLAKKAACLQACRKLYDMGEVRRDTLCPDVDDFDEEDQPMRKNES------GK 986
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPAD-RIYREFGLFVKSLLPGEAEH 758
R E+ P + SW ++ V+L FY + F+ +P + R Y FG V ++ E
Sbjct: 987 RKEIFSTAKPLIFEGSWVFNESGVQLQFYKICFVVEPPESRTYSNFGFLVNCVIDAEVTD 1046
Query: 759 LKVDLHLARGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKD 810
+V L +R R V ++ G +Q A+ +QE+ L +R S G
Sbjct: 1047 SEVTL-FSRNRVVNARVHRVGPIQLDANQVKAAKAYQELLLNGAFNRLARCS-----GSP 1100
Query: 811 DYCESSSSTFYLLLPVIFHKNSVDWKIIR------RCL------SSPVFGTPGGSVDRKS 858
S +L+LPV +S+DW + R L SSP+ G G
Sbjct: 1101 QEILWDKSQAFLVLPVHDDNDSIDWTSVHATAWVYRTLCSNFSPSSPMDGDGVGEKTHAD 1160
Query: 859 LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV--FEKNGYSPYKDSDSSSHVD 916
+ L NG+ S +++ +V H + VT ++ F P + +++D
Sbjct: 1161 M-----LCTANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKR---GFTYID 1212
Query: 917 HLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKII 976
+ Y L+ P+QPLL+AKP NLL K + E EE F +LPPELC +
Sbjct: 1213 YYKDKYQRTLRLPEQPLLKAKPTHAFHNLLIRPK--EQEGSRQEESFVELPPELCL--CL 1268
Query: 977 GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQER 1036
+ SL +PS +HR + + AI+L+ L P A +L+A+T++KC E
Sbjct: 1269 EIKSGLIRSLYFVPSFLHRFTSTVCAIQLRSPLWPWIP------AAKILEAITSKKCHEE 1322
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
FS E LE+LGD+FLKY V + LFL++D EG+L+ RRS A N+ L +LA + + YI
Sbjct: 1323 FSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRSRATCNAALYQLAKSSGIAEYI 1382
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
RD+ F+P + P + + ++ + H Q G ++ N C+ GH + +K +A
Sbjct: 1383 RDEEFNPSNWTG-----PGMLTSDSSKCRHQQ--GSFENEENYFSSCASGHRGIRRKALA 1435
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA---SQVTNICISSKSFLPLSASLDMA 1213
DVVEAL+GA++ SG +A +K + I +EF+ + + ++SF L ASL+
Sbjct: 1436 DVVEALIGAYLATSGPPSAMELMKQLDIDIEFDIGLLASARQASLPAESFQHLQASLE-- 1493
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
+LE L ++F +R LL++A H S CYQRLEFLGD VLD+L++ +L+ +P L P
Sbjct: 1494 SLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQRLEFLGDGVLDFLVSRHLFETHPGLPP 1553
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
G LTDLRS VNN+ FA + V ++ L S L I +V + VKE P
Sbjct: 1554 GTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGSVELDCEIRKFV---------QNVKEKP 1604
Query: 1334 --------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
PKVLGDL+ES GAI +D+ F+L +W+++L F+
Sbjct: 1605 DASCFEDLSAPKVLGDLLESITGAIFVDTNFDLERLWRVVLPFV 1648
>gi|357115872|ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
distachyon]
Length = 1402
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/1452 (32%), Positives = 743/1452 (51%), Gaps = 140/1452 (9%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
+DP+ IAR YQLE ++A+ N + +LGTG GKT IAVLL+ AH +R P + +FL
Sbjct: 21 EDPQTIARWYQLEALERALCGNTVAFLGTGSGKTLIAVLLLRAYAHRVRSPARDFAVFLV 80
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYC 169
PTV LV QQA+VIE +V F G K + D W + +D EVLVM PQILL
Sbjct: 81 PTVVLVDQQARVIEAHTDLRVDRFSGDMK--VDYWDAPTWRRVVDDAEVLVMTPQILLNN 138
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASP 224
L H F +++ IALLIFDECH A K NHPYA I+K+FY + +PRIFGMTASP
Sbjct: 139 LIHSFFRLQDIALLIFDECHRA--KGNHPYACILKEFYHAQLNSRPQDPLPRIFGMTASP 196
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVI--NDTS 282
V K L K I+ LENLL++KVY+V++ L ++ R+ Y I +++
Sbjct: 197 VNTKNLQPDTYL-KRISQLENLLNSKVYTVDNESALSEYIQYATTRIVHYDDSIIPSNSY 255
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALH 342
+ ++C +L +E+++ L L+ SL+ ++++RLH + +C +LG+ A
Sbjct: 256 NHVMSCLNRL----KEKHLEVLKANLYG-SSLKVAKERISRLHRTFLYCTADLGIWLASK 310
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE-VFAAI--CRRDG-IASDLSCIE 398
A+ + ++ + + G I+ + F SE V+ + C + G I DL
Sbjct: 311 AAEV-----QSSNEQFLSFWGEQIEKDVEGFIRNYSEEVYRELSCCSKTGHIGEDLEA-- 363
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
L++ ++K+ L+ L +R +Q ++CIVFV R++T+ L +L + ++ W ++
Sbjct: 364 NLQDGLLTRKVHCLVQTLLEYRHKQDLRCIVFVERVITSVVLKSLLSTITQMSGWIVKYM 423
Query: 459 VGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
G +GL S SR IL+ FR GE++L+VAT+V EEGLD+ +C LVIRFD P TV SF
Sbjct: 424 TGGISGLHSQSRKERTEILDSFRRGEVHLIVATQVLEEGLDVPSCNLVIRFDPPATVRSF 483
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS-----DAFTCS 573
IQSRGRARM S+Y LV G+ L + + M E + S+ + C
Sbjct: 484 IQSRGRARMQNSDYVLLVRRGDAAALSKTEKYLASGQLMREESLRLASTMCQPLENPLC- 542
Query: 574 EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPAN 633
EE Y+V+S+GA ++ +SL++ +CSKLP DE+F P P+F + C + LP +
Sbjct: 543 EEDYYRVESTGATVTINTSISLIYLFCSKLPSDEYFKPLPRFSI--NKASCTCTLYLPKS 600
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
+P+ Q V T + ++ KK+ CLKA +LH +GAL D LLP+ E+EP + +
Sbjct: 601 SPV-QTVST-EGEVDVLKKEVCLKACRELHAIGALTDSLLPELGFPCEEEPDIV---VEK 655
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQ-------YPVRLNFYFMQFIPDP---------- 736
Y+ E P L +W Y + L + P
Sbjct: 656 YQHE------QPAYFPEELVDNWLSFSCLGIYICYMISLEGFLQTTAPTDIILAMKCDMG 709
Query: 737 ADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILD 796
+D + R F L+ G +++ V + + L ++ A++FQ L ++++
Sbjct: 710 SDFVSRSFKLY------GTQDYVTVAIKYMG----IIHLNQEQVIIARRFQTSILSLLIN 759
Query: 797 RS-EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVD 855
+ ++ E + S YLLLP++ K +DW ++ F P +
Sbjct: 760 NAIKYYYEM---------QRSIGIVYLLLPLVSGK--IDWCTMK-------FSAPQEVNN 801
Query: 856 RKSLPSHGP-----LQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGYSPYKDS 909
+ H LQ +G + NS++ H Y +T + +D
Sbjct: 802 KDVRHCHSCKEVDLLQTKDGLLCRCMLRNSIICTPHNSRLYAITGFLDLNAKSLLHLRDG 861
Query: 910 DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPE 969
+++ + + +G+ L + QPLL A L ++RN LH R ++ E + +LPPE
Sbjct: 862 SILTYITYFKTRHGLRLTNENQPLLAASKLGQVRNFLHKRNYKN-EKVSSSSFAVELPPE 920
Query: 970 LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT 1029
LC++ + DI S S++PS+M+R+ +L++ +LK L + + V +L+ALT
Sbjct: 921 LCRVVMSPVPADILYSFSIIPSVMYRIHGMLLSAKLKVQLGPRMQQFS-VPDLKILEALT 979
Query: 1030 TEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAAR 1089
T++CQE FS E LE LGD+FLKY +HL+ + EG LT+ + N ++N+ L +LA
Sbjct: 980 TKECQEEFSQESLETLGDSFLKYVTTQHLYTKYKLHHEGTLTKMKKNLISNAALCQLACN 1039
Query: 1090 NNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHW 1149
NNL YI+ + F+P +F G +K + + Y R
Sbjct: 1040 NNLVGYIQGEVFNPKGWFIPGLGYDTCGNKSFCLSSNGMYSLRKIS-------------- 1085
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVTNICISSKSFLPLS 1207
+ K IAD VEAL+GA++ +G +AA F+ +G+ + F E NI I + F
Sbjct: 1086 IKSKRIADTVEALIGAYLSAAGEQAAFLFINSLGMDIGFHSEIPIERNIVIKPEEF---- 1141
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLY 1265
+++ +LEI+LG+ F LL++A H S+ G CYQRLEFLGDAVLD+L+T Y Y
Sbjct: 1142 --INIRSLEIILGYNFKDPLLLIEALTHGSYQIAGPTACYQRLEFLGDAVLDHLVTVYYY 1199
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD----YMI 1321
+ YP+ P LTDLRS VNN +A+ +V K ++ S L + Y++
Sbjct: 1200 NTYPECTPALLTDLRSASVNNNCYAHASVKAGLNKHILHSSTELHRKMAYYLENFGQAFT 1259
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLN 1381
PS E G PKVLGD++ES GAI LDS ++ VW+ M L+P+ ++ +
Sbjct: 1260 GPSHGWEAGIG--LPKVLGDVIESIAGAIYLDSKYDKEMVWRSMKPLLEPLATPETVERD 1317
Query: 1382 PIRELLELCNSYDLDLQFPSLKKGG--KFLAEAKVTGKDKDVFISACATNLSRKEAIRIA 1439
P++EL E C+ + +GG +AE +V G SA + + A ++A
Sbjct: 1318 PVKELQEFCDRRSYSRSYTKTHEGGVSSVVAEVQVEG----TIYSATRSGRDKTVAQKLA 1373
Query: 1440 SQQLFSKLKAAG 1451
+ L LKAA
Sbjct: 1374 VKSLLEDLKAAA 1385
>gi|255550219|ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
gi|223544646|gb|EEF46162.1| Ribonuclease III, putative [Ricinus communis]
Length = 1660
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/1625 (32%), Positives = 817/1625 (50%), Gaps = 117/1625 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVALV 118
R YQ+++ + AM+ N I L TG GKT IAV+LI E+ I+ K + IFLAPTV LV
Sbjct: 63 RSYQVKVFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAIKSNDFKKLIIFLAPTVHLV 122
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ +VI+++ FKV + G +K + S WEKEI++++VLVM PQILL L F+
Sbjct: 123 NQQYEVIKDNTNFKVGEYYG-AKGIDGWSMKVWEKEINEHDVLVMTPQILLDALRKAFLN 181
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+E+++L+I DECH + NHP KIMK+FY + P+IFGMTASPVV KG S+ +
Sbjct: 182 LEMVSLMIIDECH--RTTGNHPCTKIMKEFYH-KLSNKPKIFGMTASPVVQKGVSSAVDC 238
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVINDTSSSYVTCSEQLAE 294
I+ LE +LD+++Y++ED +++ V S + + Y + + S + S +
Sbjct: 239 EDQISELETILDSQIYTIEDRTEMDVHVPSAREICKFYDIAQLYSSDIKSKIEASWSKFD 298
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
++ D T +Q L + + CLE LG+ A A I L +
Sbjct: 299 ASLLSLQGSIQSSYKDADDRYKTLQQRLYNDYSKILNCLEELGLICAYEAVKICLENSPS 358
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAIC----RRDGIASDLS--CIEVLKEPFFSK 407
I E + C++ + EV + I D DL ++ ++ + S
Sbjct: 359 TAAFDIYREISL----KCKYFLE--EVLSIIGTYLPHGDSYLLDLGFDYLKAVRLSYISP 412
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
KL L+ + +F + + + C++FV+RI+TA+ + ++ + L + ++ G N + +
Sbjct: 413 KLYELLQVFLSFGVDKEVLCLIFVDRIITAKVIERFVKKVAALVHFTVSYVTGSNTSVDA 472
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
++ + + FRSG++NLL +T V EG+ + C VI FDLP+TV + QSRGRAR
Sbjct: 473 LTPKTQRETMYAFRSGKVNLLFSTDVLREGIHVPNCSCVICFDLPKTVCCYAQSRGRARQ 532
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS-----EERIYKVDS 582
S+Y ++ GN ++ D + +F + E + ++R D +T E Y VD
Sbjct: 533 NDSQYIIMLQRGNVKQRDQLFDFIRSEWLVTNTAINR-DPDVWTLKTCVPEETEAYIVDV 591
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGT 642
+GA ++A V+L+ RYCSKLP D +F P+P F + C ++LPA+A IVG
Sbjct: 592 TGASVTADSSVTLIQRYCSKLPSDRYFTPRPTFEFECFEQSFQCKMMLPASAAFQTIVGP 651
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGE 702
S + AK+ ACL+A + LH++GAL+D+LLP + TED+ + S + G R E
Sbjct: 652 VCRSQQLAKQLACLEACKQLHQMGALDDHLLPSVEEPTEDDHTVRRKGSLAGAGTTKRKE 711
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
LH L SW ++ + Y +F Y + L ++S L + ++++D
Sbjct: 712 LHGTTPIHALSGSWGENLDGATFHAYKFEFSCSIVSEKYSGYILLIESKLDDDVGNIELD 771
Query: 763 LHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDR-------SEFNSEFVPL 807
L L R ++V + G +M+A+ F E+F + + S EF+ L
Sbjct: 772 LFLVR-KTVRASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFSGSKSSRSPREFL-L 829
Query: 808 GKDDYCESSSSTFYLLLPV-IFHKNS-----VDWKIIRRCLSSPVF----------GTPG 851
K+ S YLLLP+ F +S ++W+ + C + F G
Sbjct: 830 QKETSLLWILSNMYLLLPLEAFSASSDESWKINWRGVNGCSNVVEFLKKNCFLGAEHYNG 889
Query: 852 GSVDRKSLPSHGPLQLH--NGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKD- 908
V G +H N V++ +V A H Y V +V + + SP++
Sbjct: 890 ERVRSSVTECSGGNAVHFANISVDVERVKDMVVLAIHTGKIYSVVEVVGDASAESPFEQN 949
Query: 909 -----SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH---NRKLEDSESHELE 960
S S+ ++ YGI L P+QPLL K + NLL+ L+D +
Sbjct: 950 VGGAPSKFSTFSEYFNKKYGIVLLRPRQPLLLLKQSHKPHNLLNPPDEDTLKDGLVVAKQ 1009
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
F +PPEL L I S LLPS+M+RLE+L++A +L+ ++ +
Sbjct: 1010 RQFARMPPEL--LVSIDVPIQTLKSSYLLPSLMYRLESLMLASQLRQEIACQV-SNFHIP 1066
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
+ ++L+A+TT + E+ S+ERLE+LGD+ LKY+V LFL + T EG+L+ +R+ AV N
Sbjct: 1067 SLLILEAITTPRSCEKVSMERLELLGDSVLKYSVSCDLFLRYPTKHEGQLSAQRTRAVCN 1126
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRR----CPRICSKET-ERTIHSQYDGRAPD 1135
S L +L LQ YIRD F P + A G++ C +T E + +++ P
Sbjct: 1127 STLHQLGIGCKLQGYIRDSAFIPRYWVAPGQQPAFYVSCTCGVDTLEVPLDAKFQTEDP- 1185
Query: 1136 DLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTN 1195
+ + CSKGH W+ KTI+D VEA++GA+ G AA ++W+G+ VEF+ S V
Sbjct: 1186 KVQIAICCSKGHRWMCSKTISDCVEAVIGAYYVSGGLMAALHVMQWLGMDVEFDPSLVDK 1245
Query: 1196 I--CISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR--LGGCYQRLEFL 1251
I S +S+ P ++ +E LG+ F + LL +A H S +G CYQRLEFL
Sbjct: 1246 IIKTASVRSYTPKED--EIKGIESKLGYTFSVKFLLQEAMTHASMQEQGIGYCYQRLEFL 1303
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GD+VLD LIT +LY + + PG+LTDLRS V+N+ FA V V + YK L S +L
Sbjct: 1304 GDSVLDLLITWHLYQNHTSMDPGELTDLRSACVSNENFAQVVVRRDLYKHLQHCSTLLLS 1363
Query: 1312 TINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP 1371
I Y++ + GP+ PK LGDL+ES GA+L+D+ NL+ VW+I + L P
Sbjct: 1364 QIKEYLESFHESDEVAKAT-GPKGPKALGDLLESIAGAMLIDAKLNLDEVWRIFMPLLSP 1422
Query: 1372 ILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLS 1431
+ NL+L P+REL++LCNS ++ + AE ++ + DV + + S
Sbjct: 1423 LATPQNLELPPLRELMQLCNSLGYFIKEKCINNNDIVHAELRL--QLNDVLLVGNGCDRS 1480
Query: 1432 RKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVV---AADD 1488
RK A A+ L KL+ G S S + + D +P+++ A D
Sbjct: 1481 RKAAKGKAATHLLKKLENRGIT------YSWGHSKRRKQDSNHVVDSSPLDITNDKAKDH 1534
Query: 1489 NVFEKLKISEPQGGSSCDIGSPS----LTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
+KL+ P G G PS + ++ R+ L+ELC W PT+ +
Sbjct: 1535 KKPKKLENQSPAGSG----GDPSFAGIIEAINMKKGGPRTDLFELCKKVQWTTPTYSSTE 1590
Query: 1545 ---------EEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLE 1595
+EG+ F + + I IEC G+P+ KK + + AA ML+ L+
Sbjct: 1591 NKSSTPILFDEGIERYNSFVSTITLNIPF-YGTIECTGDPRPDKKSSCDTAALAMLYELQ 1649
Query: 1596 REGYL 1600
++G L
Sbjct: 1650 KQGLL 1654
>gi|251764789|sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
Full=Dicer-like protein 3b; Short=OsDCL3b
Length = 1637
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/1631 (32%), Positives = 806/1631 (49%), Gaps = 145/1631 (8%)
Query: 64 LELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVALVQQQ 121
+E+ + A+ N I L TG GKT +AV+L E A +R + + I +FLAPTV LV QQ
Sbjct: 44 VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQ 103
Query: 122 AKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
+VI E V G S+ + D W++E+ + E++VM PQILL L H F+ M +
Sbjct: 104 FEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAV 163
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
+LLIFDECH A +HPYA+IMK+FY + P +FGMTASPV KGAS N I
Sbjct: 164 SLLIFDECHRAC--GSHPYARIMKEFYFGSQWR-PDVFGMTASPVATKGASTLHNCEAHI 220
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA---EIKR 297
+ LE LDAK+Y VED +LESF S P ++N +Y+ + L +I
Sbjct: 221 SQLELTLDAKIYIVEDRNELESF-SPPTT-------IVNKYYDAYMVDFDNLKSKLQIFS 272
Query: 298 EQYISAL-------SRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGALHASYILLS 349
+++ S L S K D ++ T+ K L+R H + + L +LG + S ++
Sbjct: 273 DEFDSLLVGLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLG---PIITSEVVKI 329
Query: 350 GDETMRNELIEAEGNTIDD-SLCRFASQASEVFAAI------CRRDGIASDLSCIEVLKE 402
E+++ L ++E SLC S E + I + + S+ E+ K
Sbjct: 330 HIESVK-PLCDSEDCIFSKASLCLHMSYFKEALSLIEEILPQGYGELMKSESGSEELTKR 388
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
+ S K+ LI I +F + C++FV+RI+TA+A+ ++ + + + +L G +
Sbjct: 389 GYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGS 448
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP TV S++QSR
Sbjct: 449 TSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSR 508
Query: 523 GRARMPQSEYAFLVDSGN-QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY--K 579
GRAR SE+ +++ GN Q++ + + N + ++ ++ S + +Y +
Sbjct: 509 GRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQGMYTYQ 568
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
V S+GA I+A V+L+ +YC KLP D +F PKP F + G C + LP NA I
Sbjct: 569 VQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSI 628
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM---LFSSDSDSYEG 696
VG SS +K+ L+A + LH+LG LND+L+P +EPM ++D G
Sbjct: 629 VGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-----LTEEPMDTDFTTADEKCISG 683
Query: 697 EGS--RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG 754
G+ R ELH L +W + LN Y + F+ D Y F L ++ L
Sbjct: 684 PGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDD 743
Query: 755 EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR-------SE 799
+ K+DL L + V T + P G +Q + FQE F I R S
Sbjct: 744 DVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSG 803
Query: 800 FNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPVFGTPGGSV 854
+F+ K + ++ + YLLLP+ I S+ W+ I C +
Sbjct: 804 AQRDFI-FKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQG 862
Query: 855 DRKSLPSHGPLQLHNGWSSE-----------SDVENSLVYATHKKWFYLVTNIVFEKNGY 903
D +P + Q G E S +++S+V + H Y V +++ +
Sbjct: 863 DENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAE 922
Query: 904 SPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLEDSES 956
+ K S +S VD+ YGI ++HP+QPLL K NLL ++ K D +
Sbjct: 923 DSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGST 982
Query: 957 -----HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA 1011
E E+ +PPEL L + + DI S LLPS++HRL++L++A +L+ +
Sbjct: 983 GKPLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGY 1040
Query: 1012 SFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
+ + ++L+A+TT +C E FSLERLE+LGD+ LKY VG LFL + EG+L+
Sbjct: 1041 N----QHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLS 1096
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERT-IH 1126
RS AV N+ L K +LQ Y+RD FDP ++ A G R P C ET H
Sbjct: 1097 DMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSH 1156
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV 1186
+Y P + C +GH W+ KTI+D VEALVGA+ G AA ++W GI +
Sbjct: 1157 RRYIRDDPSFFVGK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDI 1215
Query: 1187 EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--C 1244
+ + + + ++ LS D+ LE L + F +GLLL+A HPS LG C
Sbjct: 1216 KCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYC 1275
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGD+VLD L+T +LY+ + + PG+LTDLRS LV+N+ FA V + + L
Sbjct: 1276 YQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQH 1335
Query: 1305 DSNVLSETINNYV-DYMITPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTV 1361
S +L E I YV + E + C PKVLGD++ES GA+ +D+ FN++ V
Sbjct: 1336 GSGILLEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMV 1395
Query: 1362 WKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDV 1421
W+I L P++ L L P RELLELC+ L KG + + E + +D+
Sbjct: 1396 WEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDE-- 1453
Query: 1422 FISACATNLSRKEAIRIASQQLFSKLKAAGY-----VPKTKSLE---SILKSSPKSEARL 1473
+ A + ++K A A+ ++ + LK G + K K L+ S L+ S
Sbjct: 1454 LLVAQGHDRNKKRAKAKAASRILADLKQQGLSIKQCLSKAKQLDIVTSDLQFDLTSSGTQ 1513
Query: 1474 IGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAAN 1533
+ Y +D N + L +G SS + + ++ RS L++LC
Sbjct: 1514 LSY---------SDLNDYHIL-----EGLSS--VKKEVVLPLKMEKGGPRSALFKLCKIL 1557
Query: 1534 CWKPPTFDCCKE--------EGLSHLKLFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAE 1584
W P F+ ++ +G + +F + + P+ I GE + KK A +
Sbjct: 1558 QWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITLHIPDATTITFQGERRTDKKSAQD 1617
Query: 1585 HAAEGMLWCLE 1595
A+ ML L+
Sbjct: 1618 SASLMMLHKLQ 1628
>gi|255547506|ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative [Ricinus communis]
Length = 1388
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/1427 (33%), Positives = 743/1427 (52%), Gaps = 96/1427 (6%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQ 121
YQLE +KA+++N IV+L TG GKT IA++L+ AHL+RKP I +FL P V LV+QQ
Sbjct: 12 YQLEALEKAIQQNTIVFLETGSGKTLIAIMLLRSYAHLLRKPSPFIAVFLVPQVVLVKQQ 71
Query: 122 AKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
A+ +E V + G W+++I+QYEVLVM PQILL L H F K++ I
Sbjct: 72 AEAVETHTDLTVGKYWGEMGVDFWDAGSWKQQIEQYEVLVMTPQILLDGLRHSFFKLDCI 131
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGASAQANL 236
+LIFDECHHA+ K HPYA I+ +FY + +PRIFGMTASP+ KGA ++
Sbjct: 132 KVLIFDECHHARGK--HPYACILTEFYHRQLTYRDSALPRIFGMTASPIKSKGAKSELAY 189
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
I LEN++ +KVY+ L F+ + Y P ++ + Y + +E L +K
Sbjct: 190 WTEIRELENIMYSKVYTCASESVLAEFIPFSTPKFKFYKP-MDIPYAIYASLAENLKILK 248
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD-ETMR 355
+ + L D + +T+K+++++H ++ +CL+ LGV AL A+ IL + E
Sbjct: 249 SKYECNLKLLDLTD-AVVESTSKRISKMHSTLMYCLDELGVWLALKAAQILSCHESEFFS 307
Query: 356 NELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGI 415
++ G I ASQA + + I + ++ + K+ LI
Sbjct: 308 CGKLDISGENIVKEFGLNASQALDNCINSGPKWSIGENAEA--DIEAGLLTTKIFCLIDS 365
Query: 416 LSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVNAGLKSMSRNAM 473
L +R + ++CI+FVNR++ A L +L L ++ + W+ ++ G N L+S SR
Sbjct: 366 LLDYRDIRDLRCIIFVNRVIAAIVLQTLLGELLPRYNSGWKTQYIAGNNFRLQSQSRKTQ 425
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
I+E+FR G++N++VAT + EEGLD+Q+C LV+RFD TV+SFIQSRGRARM S+Y
Sbjct: 426 NEIVEEFREGKVNIIVATSILEEGLDVQSCNLVVRFDPSTTVSSFIQSRGRARMQNSDYL 485
Query: 534 FLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS-------EERIYKVDSSGAC 586
+V SG+ ++N+ D M +E + S CS E Y V+S+ A
Sbjct: 486 LMVKSGDVSTHSRLENYLASGDLMRKESIRHGS---VPCSPIRSEFHEGEYYFVESTNAL 542
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
++ VSL++ YCS+LP D +F P P+ ++ C ++LP + IH I + + +
Sbjct: 543 VTLTSSVSLIYFYCSRLPSDGYFKPTPRCLIDKEMER--CTLLLPKSCSIHTI--SVEGN 598
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
++ K+ ACL+A + LHK+GALND L+P + +E + S + Y+ E H M
Sbjct: 599 VKIIKQKACLEACKQLHKIGALNDNLVP---DIVVEETVAQQSGNGPYDDE------HPM 649
Query: 707 LVPA-VLRQSWTKSQ-----YPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLK 760
P ++ Q+ KS+ Y + LN F+ IP F L ++S L + L
Sbjct: 650 YFPPELVGQASQKSEAKYYCYLIELNQNFVYEIP------VHNFVLAMRSELESDILGLD 703
Query: 761 VDLHLARGRSVMTKL--------VPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDY 812
+DL RG +M KL P ++ ++F LKV++D S E + G
Sbjct: 704 LDLEADRGL-LMVKLKYIGEIHLTPETVIMCRKFLITVLKVLVDHSIDKLEDILKGLK-- 760
Query: 813 CESSSSTFYLLLPVI--FHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLP---SHGPLQL 867
+ YLLLP++ K S+DW + +S +F D K+ P + +Q
Sbjct: 761 LRNGPEIDYLLLPLVGSCQKPSIDWDAV----TSVLFSYENVLEDHKNCPLKEAACVIQT 816
Query: 868 HNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDSDSSSHVDHLISSYGIH 925
+G + ++NS+VY H Y + + NG+S ++ S++++ +GI
Sbjct: 817 KDGVVCKCTLQNSVVYTPHNGKVYFIDGTLDHLNGHSLLELRNGYHKSYMEYYKDQHGIK 876
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSS 985
L +Q LLR + +F L+N L NR + E Y + LPPELC + + S S
Sbjct: 877 LHFDQQLLLRGRHIFPLQNYL-NRCRQQKEKDSQNAYVE-LPPELCHIFMSPISISSFYS 934
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+ +PSIMHRLE+LL+A LK L + + +L+A+TT+KCQE+F LE LE L
Sbjct: 935 FTFVPSIMHRLESLLIASNLKKLHLDHCMQSVAIPTIKVLEAITTKKCQEKFHLESLETL 994
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+FLKYAVG+ LF + EG L+ ++ ++N+ L +L + + +IR++ FDP
Sbjct: 995 GDSFLKYAVGQQLFKTYQNHHEGLLSIKKDKLISNATLCRLGCDSKIPGFIRNESFDPKN 1054
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ C +E + N K L +K IADVVEAL+GA
Sbjct: 1055 WLIPDEISG--CYSLSEEILS-----------NGRKMYIKRRRKLKEKMIADVVEALIGA 1101
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLH 1225
++ G A FL WIGI+ +F N+ + +++ LE LL + F
Sbjct: 1102 YLSTGGEIAGLLFLDWIGIKADF-----LNMPYERGFEMNPEKYVNICHLESLLKYSFRD 1156
Query: 1226 RGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY YP + PG LTD+RS
Sbjct: 1157 PCLLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITVHLYEKYPGMSPGLLTDMRSAS 1216
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--ITPSSTREVKEGPRCPKVLGD 1341
VNN +A AV + +K+++ S L + I + V + ST + PKVLGD
Sbjct: 1217 VNNDCYAQSAVREGLHKYILHASQKLHKDIVSTVANCKEFSSESTFGWESEISFPKVLGD 1276
Query: 1342 LVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPS 1401
++ES GAI +DSG+N V+ + L+P++ ++L+P REL ELC D + P
Sbjct: 1277 VIESLAGAIFVDSGYNKEVVFNSIRPLLEPLITPETIRLHPTRELTELCQKQHFDRRKPV 1336
Query: 1402 LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
+ + ++ V + V + RK A R+AS+++ LK
Sbjct: 1337 VSRNNG-MSCVTVEVEANGVVFKHTSAAAERKTAKRLASKEVLRALK 1382
>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1758
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1716 (30%), Positives = 822/1716 (47%), Gaps = 211/1716 (12%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVA 116
+ R+ QLE + A + N I + TG GKT IA+LLI E IR K + +FLAPTV
Sbjct: 52 VPRRDQLEAFEVAKKRNTIAIMDTGSGKTLIAILLIKETGQAIRSSGVKKLIVFLAPTVH 111
Query: 117 LVQQQAKVIEESIGFKVRTFCGG----SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
L Q K I+ + +V + G + LKS W+KEI +V+VM PQILL
Sbjct: 112 L---QCKNIKLNTDLQVEEYYGSKGVDTWNLKS---WQKEISDNDVMVMTPQILLDAFRK 165
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
F+ +E+I L++ DECH A NHPYAKIM +FY K P+IFGMTASPV +G S+
Sbjct: 166 AFLSIEMICLMVIDECHWAS--GNHPYAKIMAEFYHQANEK-PKIFGMTASPVGKRGVSS 222
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP-------VINDTSSSY 285
I+ LEN+LD++ Y V+D +++ ++ S Y P + +S+
Sbjct: 223 TLVCEGQISDLENILDSRSYVVKDRTEMDVYIPSAKESCRFYDPARFHALSLKPKIEASW 282
Query: 286 VTCSEQLAEIKRE-----QYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGA 340
C L+E + + Q AL HQ + N ++ +CLE+LG+ A
Sbjct: 283 SKCDVLLSEFQSDYKDMDQKFKAL------HQRMSNELAKI-------LYCLEDLGLLCA 329
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL--SCIE 398
A+ I + E E + + ++ D + D+ C +
Sbjct: 330 YEAAKICQQKFSKIHGE-CEVYRKANLQCVTIIEEVIKIIEESLHLADEMILDVEFDCSK 388
Query: 399 VLKEPFFSKKLLRLIGILSTF------------------------------RLQ-QHMKC 427
+ + S KLL LI + TF R++ + C
Sbjct: 389 AVGMGYISPKLLELIKLFETFGYVFTKVTLALNVFTRTNIGINCISINEYKRVEPSQLLC 448
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNL 487
++FV RI+TA+ + ++ + ++ ++ G N +++R K IL+ FRSG++NL
Sbjct: 449 LIFVERIITAKVIERFVKKVSQISHLTVAYVTGSNTSADALARKRQKEILDSFRSGKVNL 508
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLI 547
L T V EEG+ + C VIRFDLP TV S+IQSRGR+R S++ +++ GN ++ + +
Sbjct: 509 LFTTDVLEEGIHVPNCSCVIRFDLPTTVCSYIQSRGRSRRANSQFILMLERGNLKQRNQL 568
Query: 548 KNFSKEEDRMNREIMDR---TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLP 604
+ + E MN + + ++ AFT + Y VDS+GA ++ VSL+++YC KLP
Sbjct: 569 FDIIRSERSMNDAAVSKDHESNLRAFTVRKTESYCVDSTGASVTLDSSVSLINQYCEKLP 628
Query: 605 HDEFFNPKPKFYYFD-DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
D++ + KP F + GG +C +ILP NA +VG + AK CL+A + LH
Sbjct: 629 RDKYSSAKPNFVSLPMEGGGHVCKLILPPNAAFQTLVGPSGKDVRQAKTLVCLEACKKLH 688
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG----SRGELHEMLVPAVLRQSWTKS 719
++GALND+L+P ++ E + ++ + +S + G R ELH L SW
Sbjct: 689 QMGALNDHLVPFVEDPLEADNIIKNKESSAAAAAGAGTTKRKELHGTASVRALCGSWGDK 748
Query: 720 QYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG 779
+ + Y +F + IY F L V+S L + ++++DL+L + V T ++ G
Sbjct: 749 PDGAKFHAYKFEFKCNIVSEIYSGFVLLVESKLDDDVGNIELDLYLI-SKMVKTSVISCG 807
Query: 780 --------IMQAQQFQEMFLKVILDR-------SEFNSEFVPLGKDDYCESSSSTFYLLL 824
+ +A+ F E+F + R + EF+ L KD S YLLL
Sbjct: 808 QVDLDAEQVTKAKGFHELFFNGLFGRLIRKSTTVQGEREFL-LQKDSELLWSPKNSYLLL 866
Query: 825 P------VIFHKNSVDWKIIRRCLS-------------------------------SPVF 847
P + + W I C S S +
Sbjct: 867 PLEKSNDICIRSLQIHWSAINSCASAIEFVRQRFSLVTEVSDDNSKIISPPCDTDNSKII 926
Query: 848 GTPGGSVDRKSLP--------------SHGPLQLHNGWSSESDVENSLVYATHKKWFYLV 893
P + +RK + S N S V++++ A H Y +
Sbjct: 927 SPPCDTDNRKIISPPCDTRSSSDMECESTNMFHFANCVVDVSSVKDNVALAIHTGKVYCI 986
Query: 894 TNIVFEKNGYSPYK-DSDSSSHVDHLI------SSYGIHLKHPKQPLLRAKPLFRLRNLL 946
++V + SP+ +SD S D + YGI L+HP+QPLLR K NL
Sbjct: 987 IDVVDNSSAESPFDGNSDKSGAEDKMTFTQYFQKRYGITLRHPEQPLLRLKQGHNAHNLF 1046
Query: 947 HNRKLEDSESHELE--------EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLEN 998
N ED + +P EL L ++ +D+ S+ LLPS+M+R+E+
Sbjct: 1047 LNLPEEDGGDKSSQVGPVAPKVPVHVHIPSEL--LCLLDVKRDVYKSMYLLPSLMYRIES 1104
Query: 999 LLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHL 1058
L+++ +L+ ++ + ++ + ++L+ALTT +C E+FS+ERLE+LGD+ LKYAV HL
Sbjct: 1105 LMLSSQLRAEING-HTDNFKIPSSLVLEALTTLRCCEKFSMERLELLGDSVLKYAVSCHL 1163
Query: 1059 FLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC----P 1114
+L + EG L+ R AV NS L KL +NLQ YIRD F+P ++ A G+ C P
Sbjct: 1164 YLKYPKKHEGHLSSLRQWAVRNSTLHKLGTDHNLQGYIRDSAFEPRRWIAPGQDCIHTVP 1223
Query: 1115 RICSKET-ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFK 1173
C ET E + ++ P + ++ C +GH W+ KTIAD VEAL+GA+ G
Sbjct: 1224 CDCGLETLEVPLDVKFHTEDPKVVVGKL-CDRGHRWMCSKTIADCVEALIGAYYVGGGLI 1282
Query: 1174 AATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAF 1233
A+ +KW+GI E S V ++ ++A+LE +G++F +GLL++A
Sbjct: 1283 ASLHMMKWLGIDSGLEPSMVDKAITAASLHTYTPKVNEIASLEAKIGYEFSVKGLLVEAT 1342
Query: 1234 VH--PSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S + G CY+RLEFLGD+VLD LIT +L+ + ++ PG+LTDLRS VNN+ FA
Sbjct: 1343 THLSESEHGTGCCYERLEFLGDSVLDLLITWHLFQSHTEIDPGELTDLRSASVNNENFAQ 1402
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAIL 1351
AV ++ ++ L+ S +L I Y + P +G + PK LGDLVES GAIL
Sbjct: 1403 AAVRRNLHQHLLHSSGLLQSQILEYAKVISEPEDNAVPLQGIKAPKALGDLVESIAGAIL 1462
Query: 1352 LDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNS--YDLDLQFPSLKKGGKFL 1409
+D+ +L+ VWK+ L PI+ L+L P+REL++L +S Y + ++ KKG
Sbjct: 1463 IDTKLDLDQVWKVFNPLLSPIVTPEKLELPPLRELMQLSDSLGYFVKVKVSHDKKGTMEH 1522
Query: 1410 AEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSS-PK 1468
E +V ++ + N +K A A+ QL L+ G + + ++ + P
Sbjct: 1523 VEIRVQLPNERLVREGKGPN--KKSAKGDAAFQLLKDLEKRGISYSSSKGKKVMDYTIPA 1580
Query: 1469 SEARLIGYDETPINVV-----------AADDNVFEKLKISEPQGGSSCDIGSPSLTTGGL 1517
+ D+ P V AAD++ + +S +S I P +++ +
Sbjct: 1581 CQIE----DQPPKPVAIKKPKLDKTNSAADESTGDLKDVSSKASDTSGSI--PVVSSIKM 1634
Query: 1518 QNRSA-RSRLYELCAANCWKPPTFD------------CCKEEGLSHLKLFTFRVIVEIEA 1564
+ RS LYE+C W P+FD C EG L F ++ + I
Sbjct: 1635 NKKGGPRSELYEVCKKKLWPLPSFDSTEYKDRTLFESCKGLEGSKGLNCFVSKITLGIPG 1694
Query: 1565 PEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
I+C GE ++ KK + + AA L+ L+R G +
Sbjct: 1695 YGD-IKCQGEARSDKKSSYDSAAVQALYELQRLGKI 1729
>gi|224109196|ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/1450 (33%), Positives = 748/1450 (51%), Gaps = 107/1450 (7%)
Query: 48 AQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI 107
Q+ DP AR YQLE ++A+++N IV+L TG GKT IA +L+ AHL+RKP + I
Sbjct: 11 TQQLPADPLPFARSYQLEALEQALKQNTIVFLETGSGKTLIATMLLRSYAHLLRKPSRFI 70
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHC-DWEKEIDQYEVLVMIPQIL 166
+FL P V LV+QQA V+ V + G SH W++EID++EVLVM QIL
Sbjct: 71 AVFLVPEVFLVRQQAGVVRMHTDLNVGMYWGDMGIDFSHAATWKQEIDKHEVLVMTHQIL 130
Query: 167 LYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTA 222
L L + K++ I +LIFDECHHA + NHPYA IM +F+ ++ +PRIFGMTA
Sbjct: 131 LNGLRQGYFKLDFIKVLIFDECHHA--RGNHPYACIMTEFFHRELRSGHHDLPRIFGMTA 188
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDT 281
S + KGA++++ + I LEN++++KVY+ L F+ SP Y P+ I D
Sbjct: 189 SLIKSKGANSESYYRQQICELENIMNSKVYTCASETVLAEFIPSPAAEFLFYEPMKIPD- 247
Query: 282 SSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGA 340
Y E+L +K + + L ++L +S + +++++H ++ FC LGV A
Sbjct: 248 -GIYACLEEELGNLKAKHEL--LLKQLDLSESAAESVHSKISKVHSALMFCSGELGVWLA 304
Query: 341 LHASYILLSGD---ETMRNELIEAEGNTIDDSLCRFASQA-SEVFAA-ICRRDGIASDLS 395
A+ L D + + ++ G TI C AS S F+A C D +D+
Sbjct: 305 FQAARFLSHSDTDSDFIAWGKVDVSGETIVKKFCWDASLVISNCFSAECCIGDNTEADVG 364
Query: 396 CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL-KFLASWR 454
+ K+L LI L +R + ++CIVFV R++TA L +L+ L +SW+
Sbjct: 365 A------GLITAKVLCLIKTLLQYRDLKDIRCIVFVERVITAVVLESLLRELLPKHSSWK 418
Query: 455 CHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
++ G N+GL+S +R I+E+FR G +N++VAT + EEGLD+Q+C LVIRFD P +
Sbjct: 419 TKYIAGNNSGLQSQTRQMQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPPSS 478
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS- 573
V+SFIQSRGRARM S+Y +V + + ++N+ + M RE + R+S+ +CS
Sbjct: 479 VSSFIQSRGRARMQNSDYLLMVKTEDSTTHSRLENYLSSSEIMRRESLRRSST---SCSA 535
Query: 574 ------EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH 627
E+ Y V+ +GA ++ VSL++ YCS+LP D +F P P D C
Sbjct: 536 PQSELYEDEFYSVEGTGAVVTLSSSVSLIYFYCSRLPSDGYFKPAP--ICIIDKEKETCT 593
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLF 687
+ LP ++PI I Q + + K+ ACL+A + LH +GAL D L+P + E+E +
Sbjct: 594 LHLPKSSPIQNIC--VQGNNKNLKQKACLEACKQLHLIGALTDNLVP---DVVEEEAVAQ 648
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVL-----RQSWTKSQ-YPVRLNFYFMQFIPDP----A 737
++ Y+ E + +P L R TK Y + LN F +P
Sbjct: 649 EIRNERYDDE------QPIYLPPELASQGPRNLKTKYYCYLIELNQKFDYGVPVHDIVLV 702
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDR 797
R E + EAE + + L + VP ++ ++FQ +V++ R
Sbjct: 703 MRTELESDVLSSMGFELEAERGLLAVSLRYIGDIYLDQVP--VLLCRRFQITLFEVLIHR 760
Query: 798 SEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN--SVDWKIIRRCLSSPVFGTPGGSVD 855
E V G + + Y LLP I ++ S+DW+ I SS +F D
Sbjct: 761 EVNKLEEVLKGLE--LGTGVVMDYFLLPAIRSRSQPSIDWEPI----SSVLFSYKNE--D 812
Query: 856 RKSLPSHGP---LQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSS 912
+ S G + G ++NSLV H Y +T + NG S K + S
Sbjct: 813 HFNCSSKGNAHVVHTKGGPVCTCVLQNSLVCTPHNGNVYFITGASEDLNGRSLLKLRNGS 872
Query: 913 --SHVDHLISSYG-IHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPE 969
++ +H I L ++PLL + +F + N L+ + + E + DLPPE
Sbjct: 873 AITYKEHFAKRRNSIQLLFDQEPLLEGRHIFPVHNFLN--RCRTKKEKESKNAHVDLPPE 930
Query: 970 LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT 1029
LC + + S S + +PSIMHRLE+LL+A+ LK + S + ++ A +L+A+T
Sbjct: 931 LCDIILSPVSISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHCMQNVDIPAMKVLEAIT 990
Query: 1030 TEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAAR 1089
T+KCQE+F LE LE LGD+FLKYA + LF L+ EG L+ ++ ++N+ L +
Sbjct: 991 TKKCQEKFHLESLETLGDSFLKYAASQQLFKLYQNHHEGLLSMKKEKIISNAALCRRGCD 1050
Query: 1090 NNLQVYIRDQPFDPCQFFALGRRC-PRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH 1148
+ L +IR++ FDP + G +C + S+E Y +G
Sbjct: 1051 HKLPGFIRNESFDPKLWMIPGDKCGSDLLSEEPLSECRKIY--------------VRGRR 1096
Query: 1149 WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSA 1208
+ KT+ADVVEAL+GA++ G A F+ WIGI+V+F + + + L A
Sbjct: 1097 KVKSKTVADVVEALIGAYLSTGGEVLALFFMDWIGIKVDF-------MIVPYERHFQLQA 1149
Query: 1209 S--LDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYL 1264
+++ LE LL + F LL++A H S+ + CYQRLEFLGDAVLDYLIT +L
Sbjct: 1150 EKFVNVRYLESLLNYSFRDPSLLVEALTHGSYMLPEIPSCYQRLEFLGDAVLDYLITMHL 1209
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS 1324
Y YP + PG LTDLRS VNN +A AV +K ++ S L + I + S
Sbjct: 1210 YKEYPGMSPGLLTDLRSASVNNDCYAQSAVKGDLHKHILHTSQDLHKHIVETAEIFQKSS 1269
Query: 1325 --STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNP 1382
ST + PKVLGD++ES GAIL+DSG+N V++ + L+P++ + ++L+P
Sbjct: 1270 LGSTFGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVFQSIRPLLEPLITPATVRLHP 1329
Query: 1383 IRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQ 1442
REL ELC D + + G+ + V G + F AT +K A ++AS++
Sbjct: 1330 ARELSELCQKQHFDYKKSVVSYNGRNASITIVVGANGVTF-KHTATAADKKTAKKLASKE 1388
Query: 1443 LFSKLKAAGY 1452
+ LK + +
Sbjct: 1389 VLKSLKESNF 1398
>gi|145338056|ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640405|gb|AEE73926.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1445 (32%), Positives = 757/1445 (52%), Gaps = 132/1445 (9%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P AR YQ+E +KA+++N IV+L TG GKT IA++L+ A+L RKP C+FL P
Sbjct: 20 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 79
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+ ++ KV + G W++E+D+YEVLVM P ILL L H
Sbjct: 80 VVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHS 139
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKG 229
F+ + +I +LI DECHHA K HPYA IM++FY ++ VPRIFGMTAS V KG
Sbjct: 140 FLSLSMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKG 197
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYVT 287
+ + K I+ LE L+++KVY+ E+ L FV S+P + YQ+ + + +S V
Sbjct: 198 ENLDSYW-KKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVE 256
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
E+L IK + L + ++ + K+L R+ ++ +CL++LG+ A A+ L
Sbjct: 257 KLERLT-IKHRLSLGTLDL---NSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL 312
Query: 348 LSGDETMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIEVLKEP-FF 405
+ + + E N +L + F S AS+ F A + G+ ++ I E
Sbjct: 313 ---SASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQ-GLNWSVANINGNAEAGLL 368
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLVGVNAG 464
+ K + LI L + ++++CI+FV+R++TA L +L L +W+ ++ G N+G
Sbjct: 369 TLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSG 428
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
L++ +R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFIQSRGR
Sbjct: 429 LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGR 488
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------SEERIY 578
ARM S+Y +V+SG+ + + RM E +D + C S+E ++
Sbjct: 489 ARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHS---LVPCPPLPDDSDEPLF 545
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQ 638
+V+S+GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP + P+ +
Sbjct: 546 RVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPVKE 603
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSSDSDSY 694
+ +++ + K+ CLKA LHK+GAL+D+L+P E + + E + ++++ Y
Sbjct: 604 V--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCY 661
Query: 695 EGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLP 753
P ++ Q +Q +FY ++ P+ P + + L + +L
Sbjct: 662 ------------FPPELVSQ--FSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLE 707
Query: 754 GEAEHLKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
+ + L RG +T L ++ ++FQ +V+LD S N +
Sbjct: 708 DDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVEN--LME 765
Query: 807 LGKDDYCESSSSTFYLLLPVIF-HKNS-VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP 864
+ + YLL+P H+ S +DW++IR +L SH
Sbjct: 766 ALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSV----------------NLTSHEV 809
Query: 865 LQLHNGWSSESD---------------VENSLVYATHKKWFYLVTNIVFEKNGYSPY--K 907
L+ H S+ V+N+LVY H + Y ++ NG S +
Sbjct: 810 LEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKR 869
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP 967
+S +++++ +GI L +PLL + +F L + LH K + + H+ E F +LP
Sbjct: 870 NSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDRE--FVELP 927
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PELC + + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A
Sbjct: 928 PELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEA 982
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
+TT+KC+++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L +
Sbjct: 983 ITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFG 1042
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
+ LQ +IRD+ F+P + G+ +S + P+ N V +
Sbjct: 1043 CQQKLQGFIRDECFEPKGWMVPGQ----------SSAAYSLVNDTLPESRNIYVASRRN- 1091
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
L +K++ADVVE+L+GA++ + G AA F+ W+GI+V+F ++ I S +
Sbjct: 1092 --LKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTK-----IQRDSPIQAE 1144
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLY 1265
+++ +E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY
Sbjct: 1145 KLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLY 1204
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS- 1324
YP L PG LTD+RS VNN+ +A VAV + +K +++ S+ L + I+ V S
Sbjct: 1205 DKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSL 1264
Query: 1325 -STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
ST + PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+
Sbjct: 1265 QSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPV 1324
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
REL ELC + +L K F E K K++ + A +K A ++A +++
Sbjct: 1325 RELTELCQKWQFELS--KAKDFDSFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEV 1378
Query: 1444 FSKLK 1448
+ LK
Sbjct: 1379 LNLLK 1383
>gi|168027292|ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162682596|gb|EDQ69013.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1460
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/1439 (33%), Positives = 736/1439 (51%), Gaps = 124/1439 (8%)
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR-KPQKSICIFLAPTVALVQ 119
+YQ + + A+ +N I+YL TGCGKT +AVLLI LA R + K + +FLAPTV LVQ
Sbjct: 3 RYQQQAFEAALNKNTILYLETGCGKTLVAVLLIKSLAKNTRLENDKRLIVFLAPTVILVQ 62
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQA+VI V + G SK + S +W+ +I + EV+VM PQ+ L L H F+KM
Sbjct: 63 QQARVIRIHTDLNVGEYYG-SKNVDTWSRAEWQTQIAEVEVMVMTPQVFLNNLQHGFLKM 121
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK--VPRIFGMTASPVVGKGASAQAN 235
++ LLIFDECHHA NH YA+IMK FY ++ K +PRIFGMTASPV KG +
Sbjct: 122 NIVELLIFDECHHAH--KNHAYAQIMKGFYHVNVDKGRLPRIFGMTASPVTKKGVKSSIG 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN-DTSSSYVTCSEQLA- 293
+ + LE+LL ++V++ +D E++E FV + V +Y N D + Y E L
Sbjct: 180 AAEQLFGLEDLLKSEVFAFKDREEIE-FVVPTAITVEEYYDAPNLDILAPYKEEIEALII 238
Query: 294 --EIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGALHASYILLSG 350
E ++++ + D K+ NR H ++FCLE LG+ A A+ L
Sbjct: 239 KFEKAHTDAVASVQAEFKDQTEFIYKLKERANRFHRDVQFCLEELGLWCASKAAEYLFKV 298
Query: 351 DETMRN--ELIEAEGNTID----DSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPF 404
D + E I+A ++ ++ S E A + +++ + + + +
Sbjct: 299 DNGLEGFGEAIQAFKRNLNLFMRETCGLLKSAVPEGSARLVKKE-------LQDAVSKGY 351
Query: 405 FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL-ASWRCHFLVGVNA 463
+ K+ LIG+L R + +K I+FV R + A L+Y++ +L+ L ++R + G +
Sbjct: 352 LTPKVYHLIGVLFHKRSMKDVKRIIFVERRMAAVVLAYLVNDLQCLRENFRSESICGASI 411
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
G + +R + + F GE+NLLVAT++ EEG+D++ C VIRF+LP+T+ S IQSRG
Sbjct: 412 GPHT-TRREQQCTMTAFNKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRG 470
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT--------CSEE 575
RAR S Y ++ GN + D + E + E + R A + C
Sbjct: 471 RARRSGSTYIVFLERGNGAQRDQFSKIKQSELSVRDEAISRVHIHASSAHNSCLPICEPL 530
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI--CHIILPAN 633
+ Y+VD +GA ++ + L++R+CSKLP DE + PK + Y G + C I LP
Sbjct: 531 KTYRVDCTGASVNTETSIELVNRFCSKLPRDESYTPKAE--YLSQKVGLLYKCDIKLPFG 588
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN--ATEDEPMLFSSDS 691
+PI++++G PQ + AK+ L+A LHK GAL+D LLP D A + E ++ +S
Sbjct: 589 SPIYEVLGEPQRTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAADVEKIMQPKNS 648
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPA-DRIYREFGLFVKS 750
+ G ++ ELH + W S L Y+M F P D ++ F L + +
Sbjct: 649 SGF-GTTAQKELHSVAEAEAFTGHWHTSSSGAVLFAYYMSFDIHPVEDEMHANFVLLIGA 707
Query: 751 LLPGEAEHLKVDLHLARGRSVMTKLVPSG--IMQAQQFQEM-FLKVILDRSEFNSEFVPL 807
L + L+++L L RGR KL P G + A Q + IL F+ P+
Sbjct: 708 ALDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLTADQLSNAKLFQTILFNGMFSKMIQPV 767
Query: 808 --GKDDYCESSSSTF-------------YLLLPVIFHKNS-------VDWKIIRRCLSS- 844
+ ES+ S+F YLLLP + ++ +DWKII+ S
Sbjct: 768 QENRKRKRESAISSFLTERMGLWKSNNAYLLLPAVLEGSNDVGTLAPIDWKIIQATSSVV 827
Query: 845 --------PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
+ P V RK P + N + S++ + V H Y V +
Sbjct: 828 KNLRFKFLEILTRPFSFVRRKP-PVNCLTFAGNHQVATSELVDVAVLTGHTGIIYPVLRV 886
Query: 897 VFEKNGYSPY---KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLL--HNRKL 951
+ + +S + K+ + ++ + +G L+HP QPLL+ K R NLL K+
Sbjct: 887 LHDTTAHSQFPGEKNREFKTYAEFFKIKHGRMLEHPNQPLLQLKQNHRPHNLLPADAGKI 946
Query: 952 EDS---ESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHL 1008
E + ++ ++PPELC ++ FS I S LPS+MHR++++++A +L+
Sbjct: 947 EGTPLVSKATMQSTSVEMPPELCV--VLKFSAAIVRSAYWLPSVMHRIKSVVLASQLRRS 1004
Query: 1009 LSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEG 1068
+ A ++ +LKALTT +C E F++E LE+ GD+FLKYAV R LFL T +EG
Sbjct: 1005 IDAP-----KIPVMEVLKALTTTRCNENFNMEALELFGDSFLKYAVSRKLFLESSTANEG 1059
Query: 1069 ELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETE-- 1122
L+ RR ++ N L KLA L YIRD FDP ++ A G +R C ++
Sbjct: 1060 VLSTRRIRSICNEALHKLAVDRGLSAYIRDCQFDPSRWAAPGMLAAKRVNCHCKEDNLLK 1119
Query: 1123 --RTIHSQYDGRAPDDLNAE------------VRCSKGHHWLHKKTIADVVEALVGAFID 1168
++ S+ G ++L + + C KGH +L KTI+DV EAL+GA+++
Sbjct: 1120 PFKSTTSKVTGVFGNELLKDKIQTETIKPRIGLTCDKGHRYLCSKTISDVTEALIGAYLE 1179
Query: 1169 -DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
+ A F+ W GI V F++ + +S L D+ E +G+ F ++
Sbjct: 1180 YGRNCEGALKFMTWAGIDVHFDSKLMEAASKASPVDLSYDYGEDLKAFEKRIGYTFKNKY 1239
Query: 1228 LLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
L L+A H S N +G CYQRLEFLGDAVLD+L+T +L++ +P PG LT LR+ V
Sbjct: 1240 LPLEALTHFS-NMVGDQIRCYQRLEFLGDAVLDFLLTRHLFTSHPTSTPGLLTSLRTASV 1298
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK----EGPRCPKVLG 1340
NN+ FA VAV + +L S L I +V ++ G PKVLG
Sbjct: 1299 NNERFARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEAADDDQKNSSFGLNGLEAPKVLG 1358
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQF 1399
DLVES GAIL+D+ F+L+ VW +M+ L+PI+ + L ++P+ EL ELC S +++
Sbjct: 1359 DLVESIAGAILVDTCFDLDKVWAVMMPLLEPIVTPATLDIHPVTELEELCMSKGYSIKY 1417
>gi|94450854|gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1445 (32%), Positives = 755/1445 (52%), Gaps = 132/1445 (9%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P AR YQ+E +KA+++N IV+L TG GKT IA++L+ A+L RKP C+FL P
Sbjct: 18 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 77
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+ ++ KV + G W++E+D+YEVLVM P ILL L H
Sbjct: 78 VVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHS 137
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKG 229
F+ + +I +LI DECHHA K HPYA IM++FY ++ VPRIFGMTAS V KG
Sbjct: 138 FLSLSMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKG 195
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYVT 287
+ + K I+ LE L+++KVY+ E+ L FV S+P + YQ+ + + +S V
Sbjct: 196 ENLDSYW-KKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVE 254
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
E+L IK + L + ++ + K+L R+ ++ +CL++LG+ A A+ L
Sbjct: 255 KLERLT-IKHRLSLGTLDL---NSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL 310
Query: 348 LSGDETMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIEVLKEP-FF 405
+ + + E N +L + F S AS+ F A + G+ ++ I E
Sbjct: 311 ---SASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQ-GLNWSVANINGNAEAGLL 366
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLVGVNAG 464
+ K + LI L + ++++CI+FV+R++TA L +L L +W+ ++ G N+G
Sbjct: 367 TLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSG 426
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
L++ +R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFIQSRGR
Sbjct: 427 LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGR 486
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------SEERIY 578
ARM S+Y +V+SG+ + RM E +D + C S+E ++
Sbjct: 487 ARMQNSDYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHS---LVPCPPLPDDSDEPLF 543
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQ 638
+V+S+GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP + P+ +
Sbjct: 544 RVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPVKE 601
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSSDSDSY 694
+ +++ + K+ CLKA LHK+GAL+D+L+P E + + E + ++++ Y
Sbjct: 602 V--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCY 659
Query: 695 EGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLP 753
P ++ Q +Q +FY ++ P+ P + + L + +L
Sbjct: 660 ------------FPPELVSQ--FSAQPETTYHFYLIRMKPNSPRNLHLNDVLLGTRVVLE 705
Query: 754 GEAEHLKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
+ + L RG +T L ++ ++FQ +V+LD S N +
Sbjct: 706 DDIGNTSFRLEDHRGTIAVTLSYVGAFHLTREEVLFCRRFQITLFRVLLDHSVEN--LME 763
Query: 807 LGKDDYCESSSSTFYLLLPVIF-HKNS-VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP 864
+ + YLL+P H+ S +DW++IR +L SH
Sbjct: 764 ALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSV----------------NLTSHEV 807
Query: 865 LQLHNGWSSESD---------------VENSLVYATHKKWFYLVTNIVFEKNGYSPY--K 907
L+ H S+ V+N+LVY H + Y ++ NG S +
Sbjct: 808 LEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKR 867
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP 967
+S +++++ +GI L +PLL + +F L + LH K + + H+ E F +LP
Sbjct: 868 NSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDRE--FVELP 925
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PELC + + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A
Sbjct: 926 PELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEA 980
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
+TT+KC+++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L +
Sbjct: 981 ITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFG 1040
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
+ LQ +IRD+ F+P + G+ +S + P+ N V +
Sbjct: 1041 CQQKLQGFIRDECFEPKGWMVPGQ----------SSAAYSLVNDTLPESRNIYVASRRN- 1089
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
L +K++ADVVE+L+GA++ + G AA F+ W+GI+V+ ++ I S +
Sbjct: 1090 --LKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTK-----IQRDSPIQAE 1142
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLY 1265
+++ +E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY
Sbjct: 1143 KLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLY 1202
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS- 1324
YP L PG LTD+RS VNN+ +A VAV + +K +++ S+ L + I+ V S
Sbjct: 1203 DKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSL 1262
Query: 1325 -STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
ST + PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+
Sbjct: 1263 QSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPV 1322
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
REL ELC + +L K F E K K++ + A +K A ++A +++
Sbjct: 1323 RELTELCQKWQFELS--KAKDFDSFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEV 1376
Query: 1444 FSKLK 1448
+ LK
Sbjct: 1377 LNLLK 1381
>gi|222619725|gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
Length = 1839
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/1672 (31%), Positives = 795/1672 (47%), Gaps = 227/1672 (13%)
Query: 43 ESSVGAQKTDKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E G QK K Q R+YQL++ + AM N I L TG GKT IAV+LI E +
Sbjct: 18 EHEAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKIN 77
Query: 101 R-KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVL 159
R K + IFLAPTV LV QQ +VIE F+V + G K +DQ+
Sbjct: 78 RTKNAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYGA-----------KGVDQW--- 123
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFG 219
+ H + D VP F
Sbjct: 124 -----------------------------------TGHGH----------DTTGVPTSFT 138
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPV 277
+ G G S+ + LENLLDAK+Y+V D E++E V S + R Y PV
Sbjct: 139 QCFLNL-GHGISSHLDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPV 197
Query: 278 INDTSSSYVTCSEQLAEI--KREQYISALSRKLHD-HQSLRNTTKQLN-RLHDSMK---F 330
+ SE+L + K + I+ L K D ++ + TK+ RL S+ +
Sbjct: 198 C------FEDLSEELGVLCSKYDALITELQNKRSDMYKDADDITKESKRRLSKSIAKICY 251
Query: 331 CLENLGVCGALHASYILL--SGDETMRNELIEAEGNTIDDSLCRFASQAS--------EV 380
CL+++G+ A A+ I + ++ E+++A D + R ++ S E
Sbjct: 252 CLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEEA 311
Query: 381 FAAICRR--DGI----ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRI 434
I +R GI S+ C+E K + S KL LI I +F +H +C++FV+R
Sbjct: 312 LHLIDKRLQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRK 371
Query: 435 VTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVG 494
+TAR + +++ + LA + FL G + + +++ K L+ FRSG++NLL T V
Sbjct: 372 ITARVIDRMIKKIGHLAHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVA 431
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
EEG+ + C VIRFDLP T S++QSRGRAR S+Y +++ GN ++ DLI + E
Sbjct: 432 EEGIHVPECSCVIRFDLPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSE 491
Query: 555 DRMNREIMDRTS---SDAFTCSEE-RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN 610
M + R S S F +EE Y V ++GA ++A +S+++RYC KLP D+ ++
Sbjct: 492 TSMVKIASSRESGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYS 551
Query: 611 PKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
PKP F + G +C + LP +A + +VG +M AK+ CL A + LH+LGAL+D
Sbjct: 552 PKPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDD 611
Query: 671 YL-LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF 729
+L L ED P + S + + G R ELH +W + ++L Y
Sbjct: 612 HLCLSVEDPV----PEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSYK 667
Query: 730 MQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIM-------- 781
M F+ D A +IY EF L + + LP E L++DL+L + V T + G++
Sbjct: 668 MNFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYL-HDKMVKTSVSSCGLLELDAQQME 726
Query: 782 QAQQFQEMFLKVILDRSEFNSEFVP-------LGKDDYCESSSSTFYLLLPV--IFHKN- 831
QA+ FQ + + + F VP L K+D ++++ YLLLP F N
Sbjct: 727 QAKLFQGLLFNGLFGKL-FTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSNV 785
Query: 832 SVDWKIIRRCLSSPVFGTPGGSVDRKSL-------PSHGPL-QLHNGWSSESDVENSLVY 883
++W +I ++ S +++ L + G L L N + +++ +V
Sbjct: 786 CINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVL 845
Query: 884 ATHKKWFYLVTNIV-----FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKP 938
A H Y +I +G S K+ + ++ YGI L+HP QPLL KP
Sbjct: 846 AVHTGKIYTALDITELSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKP 905
Query: 939 LFRLRNLLHNRKLEDSESHELEEYFDD------------LPPELCQLKIIGFSKDIGSSL 986
NLL + K D E + +E + +PPEL L + +I S
Sbjct: 906 SHNPHNLL-SSKFRD-EGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILRSF 961
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L P++M+R+E+L +A +L+ + S + +S+ ++L+A+TT +C E FS+ERLE+LG
Sbjct: 962 YLFPALMYRIESLTLASQLRSEIGYS---DSNISSFLILEAITTLRCSEDFSMERLELLG 1018
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LKYA DEG+L+ R + + N+ L KL N+Q Y+RD FDP ++
Sbjct: 1019 DSVLKYA------------DEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRW 1066
Query: 1107 FALGR--------RCPRICSKETERTIHSQYD-----GRAPDDLNAEVRCSKGHHWLHKK 1153
A G+ CP + S+ IH D G+A C KGH W+ K
Sbjct: 1067 LAPGQLSIRPSPCECP-VKSEVVTDDIHIIDDKAIVLGKA---------CDKGHRWMCSK 1116
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS--KSFLPLSASLD 1211
TIAD VEA++GA+ G +AA A LKW+GI E E + +S+ +++LP +
Sbjct: 1117 TIADCVEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFE 1176
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYP 1269
M LE LG+ F +GLL++A HPS LG CY+RLEFLGDAVLD L+T YL++ +
Sbjct: 1177 M--LEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHK 1234
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE- 1328
G+LTDLRS VNN+ FA VAV +F+ FL S +L + I YV+ + S +
Sbjct: 1235 DTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVE 1294
Query: 1329 -VKEG-PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIREL 1386
+ +G P+ PKVLGD+VES GAILLD+ +L+ VW I L PI+ NL+L P REL
Sbjct: 1295 LLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYREL 1354
Query: 1387 LELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSK 1446
+E C + + +G +A V + K+V + + RK+A AS L
Sbjct: 1355 IEWCGKHGYFVGINCRDQGDTVVATLDV--QLKEVLLVRQGFSKKRKDAKAHASSLLLKD 1412
Query: 1447 LKAAGYV-----PKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQG 1501
L+ G + KT+ E S+ + +T + N + IS+P
Sbjct: 1413 LEEKGLIIPKNASKTEQFEKHCGSTNPFNNLHVDAMDTQTPKPTKEKNAADSRNISDPL- 1471
Query: 1502 GSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFD----------CCKEEGLSHL 1551
+G P R LYELC W PT + C G S
Sbjct: 1472 -----LGKPLHVIVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQ 1526
Query: 1552 K----LFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREG 1598
K F F + + P +I G+ +A KK + + AA +L+ L+R G
Sbjct: 1527 KATPQAFAFASTITLHIPNADVISLTGDGRADKKSSQDSAALFLLYELQRRG 1578
>gi|189908862|gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
Length = 1392
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1453 (32%), Positives = 748/1453 (51%), Gaps = 115/1453 (7%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK 102
E+ Q + P AR YQ+E +KAM+ N IVYL TG GKT IA++L+ A+L RK
Sbjct: 7 ETESADQVSASSPLPFARSYQVEALEKAMKRNTIVYLETGSGKTLIAIMLLRSYAYLFRK 66
Query: 103 PQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVM 161
P +FL P V LV QQA+ ++ KV + G W++E+D YEVLVM
Sbjct: 67 PSPCFSVFLVPQVVLVTQQAEALKRHTDLKVGMYWGSMGVDFWDAPTWKQEVDTYEVLVM 126
Query: 162 IPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRI 217
P ILL L H F+ + +I +LIFDECHHA + NH YA I+K+FY ++ VPRI
Sbjct: 127 TPAILLSALRHSFLSLNMIKVLIFDECHHA--RGNHAYACILKEFYHKELKSATSLVPRI 184
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYG 275
FGMTASPV KG + + K I+ LE+L+++KVY+ + L FV S+P + Y Y
Sbjct: 185 FGMTASPVKTKGENLDSYW-KKIHELESLMNSKVYTCANESVLAQFVPFSTPSFKYYTYV 243
Query: 276 PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL 335
+ + + + E+LA+ +++ AL+ ++ + K+L+++ S+ +CL+ L
Sbjct: 244 EIPSSARAGIIAELEKLAK----EHLLALATLDLKSSTVNSIKKRLSKICSSITYCLDEL 299
Query: 336 GVCGALHA--SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASD 393
G+ AL A S+ + D + +L E +I + CR ASQA + A I DG
Sbjct: 300 GILMALKAAQSFSVSQNDFVLWGQLGEFSETSIKN-FCRDASQA--ILAYI--PDGPYWS 354
Query: 394 LSCIEV-LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL-SYILQNLKFLA 451
++ IE L+ + K++ L+ L + + ++CI+FV R++ A L S++ + L
Sbjct: 355 VANIERNLEAGLVTSKIVCLVESLLGYSSLEKIRCIIFVERVIAAMVLESFLNEILPTYN 414
Query: 452 SWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
SW+ ++ G N+GL+S +R +E FR G +N++V+T + EEGLD+Q+C LV+ FD
Sbjct: 415 SWKTKYVAGNNSGLQSQTRKKQNETVEDFRKGLVNIIVSTSILEEGLDVQSCNLVVGFDP 474
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT 571
+ SFIQS+GRARMP S+Y +V+ G+ + + RM RE D
Sbjct: 475 ASNICSFIQSQGRARMPNSDYLMMVERGDMETKSRLMTYISGGKRM-RE--DSLRYSHVP 531
Query: 572 C------SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI 625
C S Y V+S+GA ++ VSL++ YCS+LP DE+F P P+F +D G
Sbjct: 532 CQPLPKDSSGDFYAVNSTGAIVTLSSSVSLIYFYCSRLPSDEYFKPAPRFDIDEDQGK-- 589
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM 685
C + LP + + ++ Q++ K+ ACLKA LHK GAL D+L+P + E +
Sbjct: 590 CTLYLPKSCQVKEV--RVQANRNVLKQTACLKACIQLHKAGALTDHLVP---DMVLKETV 644
Query: 686 LFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREF- 744
Y+ E S P ++ Q SQ +FY + R+ EF
Sbjct: 645 QQKLGKIHYDPEQS-----SYFPPELVSQFSAHSQ--TTYHFYSI--------RMKSEFP 689
Query: 745 -GLFVKSLLPGEAEHLKVDL---------HLARGRSVMT-----KLVPSGIMQAQQFQEM 789
L +L G L+ D+ HL ++ L + ++ ++FQ
Sbjct: 690 RNLHFNDILLGTRVELEADIGNTCFRLEDHLGTIGVTLSYVGAFDLTQNEVLLCRRFQIT 749
Query: 790 FLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS--VDWKIIRRC-LSSPV 846
+V+LD S N G + + YLL+P + + +DW ++R L+S
Sbjct: 750 LFRVLLDHSVENLAAALDGL--HLRDGVALDYLLVPSTHEQKASLIDWGVLRSVNLTS-- 805
Query: 847 FGTPGGS-VDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV--FEKNGY 903
P VD + + L +G ++N+LVY H + Y I+ N
Sbjct: 806 -NRPRERHVDCSAKDASCILHTKDGLFCTCVLQNALVYTPHNGYVYCTRGILSHLHANSI 864
Query: 904 SPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
+ S S++++ + I L +PLL + +F L N LH + + + H+ E F
Sbjct: 865 LTKRKSGDVSYMEYYEKRHEIRLNFVDEPLLNGRHIFTLHNHLHMTRKKKEKEHDRE--F 922
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
+LPPELC + + S D+ S +PS+M R+E+LL+A LK S P +
Sbjct: 923 VELPPELCHVILSPISVDMIYSYKFMPSVMQRIESLLIAFNLK----KSIPT-VNIPTIK 977
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A+TT+KCQ++F LE LE LGD+FLKYAV +HLF +DT EG L+ + ++N L
Sbjct: 978 VLEAITTKKCQDQFHLESLETLGDSFLKYAVCQHLFQSYDTHHEGLLSTIKDEMISNVTL 1037
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
K LQ +IR++ F+P + G+ ++ + + N +
Sbjct: 1038 CKFGCNQKLQGFIRNECFEPKGWMVPGQ----------SSAAYALVNDYLSESRNMYIAR 1087
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF 1203
L +K++ADVVEAL+GA++ + G AA F+ W+GI+V+F T I +
Sbjct: 1088 RMN---LKRKSVADVVEALIGAYLSEGGELAALTFMNWVGIKVDF-----TTTMIQREPS 1139
Query: 1204 LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLIT 1261
+ +++ +E LL ++F + LL++A H S+ + CYQRLEFLGD+VLDYLIT
Sbjct: 1140 IQAEKLVNVRYMESLLNYKFKDKSLLVEALTHGSYMIPEIPRCYQRLEFLGDSVLDYLIT 1199
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+LY YP L PG LTD+RS VNN+ +A VAV + +K ++ S+ L + I+ V
Sbjct: 1200 KHLYGEYPNLSPGLLTDMRSASVNNECYAQVAVKSNLHKHVLHASHDLHKHISRTVSEFE 1259
Query: 1322 TPSSTREV---KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNL 1378
SS + + PKVLGD++ES GAI +DSG+N V+ + L ++ +
Sbjct: 1260 RLSSVQSSFGWESEIAFPKVLGDVIESLAGAIHVDSGYNKEVVFACIKPLLGCMITPETV 1319
Query: 1379 QLNPIRELLELCNSYDLDL-QFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIR 1437
+L+P+REL ELC +L + + G F V + K++ + A +K A +
Sbjct: 1320 KLHPVRELTELCQKAQFELSKVKGFENGEAFFP---VEVEAKEMSFAHTARAFDKKMAKK 1376
Query: 1438 IASQQLFSKLKAA 1450
+A +++ + LK +
Sbjct: 1377 LAYKEVLNSLKKS 1389
>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/1672 (31%), Positives = 794/1672 (47%), Gaps = 227/1672 (13%)
Query: 43 ESSVGAQKTDKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E G QK K Q R+YQL++ + AM N I L TG GKT IAV+LI E +
Sbjct: 18 EHEAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKIN 77
Query: 101 R-KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVL 159
R K + IFLAPTV LV QQ +VIE F+V + G K +DQ+
Sbjct: 78 RTKNAGKVIIFLAPTVQLVAQQCEVIEIHTDFEVEQYYGA-----------KGVDQW--- 123
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFG 219
+ H + D VP F
Sbjct: 124 -----------------------------------TGHGH----------DTTGVPTSFT 138
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPV 277
+ G G S+ + LENLLDAK+Y+V D E++E V S + R Y PV
Sbjct: 139 QCFLNL-GHGISSHLDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPV 197
Query: 278 INDTSSSYVTCSEQLAEI--KREQYISALSRKLHD-HQSLRNTTKQLN-RLHDSMK---F 330
+ SE+L + K + I+ L K D ++ + TK+ RL S+ +
Sbjct: 198 C------FEDLSEELGVLCSKYDALITELQNKRSDMYKDADDITKESKRRLSKSIAKICY 251
Query: 331 CLENLGVCGALHASYILL--SGDETMRNELIEAEGNTIDDSLCRFASQAS--------EV 380
CL+++G+ A A+ I + ++ E+++A D + R ++ S E
Sbjct: 252 CLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDVNGSRLFAENSALHMKFFEEA 311
Query: 381 FAAICRR--DGI----ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRI 434
I +R GI S+ C+E K + S KL LI I +F +H +C++FV+R
Sbjct: 312 LHLIDKRLQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRK 371
Query: 435 VTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVG 494
+TAR + +++ + LA + FL G + + +++ K L+ FRSG++NLL T V
Sbjct: 372 ITARVIDRMIKKIGHLAHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVA 431
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
EEG+ + C VIRFDLP T S++QSRGRAR S+Y +++ GN ++ DLI + E
Sbjct: 432 EEGIHVPECSCVIRFDLPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSE 491
Query: 555 DRMNREIMDRTS---SDAFTCSEE-RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN 610
M + R S S F +EE Y V ++GA ++A +S+++RYC KLP D+ ++
Sbjct: 492 TSMVKIASSRESGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYS 551
Query: 611 PKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
PKP F + G +C + LP +A + +VG +M AK+ CL A + LH+LGAL+D
Sbjct: 552 PKPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDD 611
Query: 671 YL-LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF 729
+L L ED P + S + + G R ELH +W + ++L Y
Sbjct: 612 HLCLSVEDPV----PEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSYK 667
Query: 730 MQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIM-------- 781
M F+ D A +IY EF L + + LP E L++DL+L + V T + G++
Sbjct: 668 MNFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYL-HDKMVKTSVSSCGLLELDAQQME 726
Query: 782 QAQQFQEMFLKVILDRSEFNSEFVP-------LGKDDYCESSSSTFYLLLPV--IFHKN- 831
QA+ FQ + + + F VP L K+D ++++ YLLLP F N
Sbjct: 727 QAKLFQGLLFNGLFGKL-FTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSNV 785
Query: 832 SVDWKIIRRCLSSPVFGTPGGSVDRKSL-------PSHGPL-QLHNGWSSESDVENSLVY 883
++W +I ++ S +++ L + G L L N + +++ +V
Sbjct: 786 CINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVL 845
Query: 884 ATHKKWFYLVTNIV-----FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKP 938
A H Y +I +G S K+ + ++ YGI L+HP QPLL KP
Sbjct: 846 AVHTGKIYTALDITELSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKP 905
Query: 939 LFRLRNLLHNRKLEDSESHELEEYFDD------------LPPELCQLKIIGFSKDIGSSL 986
NLL + K D E + +E + +PPEL L + +I S
Sbjct: 906 SHNPHNLL-SSKFRD-EGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILRSF 961
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L P++M+R+E+L +A +L+ + S + +S+ ++L+A+TT +C E FS+ERLE+LG
Sbjct: 962 YLFPALMYRIESLTLASQLRSEIGYS---DSNISSFLILEAITTLRCSEDFSMERLELLG 1018
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LKYA DEG+L+ R + + N+ L KL N+Q Y+RD FDP ++
Sbjct: 1019 DSVLKYA------------DEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRW 1066
Query: 1107 FALGR--------RCPRICSKETERTIHSQYD-----GRAPDDLNAEVRCSKGHHWLHKK 1153
A G+ CP + S+ IH D G+A C KGH W+ K
Sbjct: 1067 LAPGQLSIRPSPCECP-VKSEVVTDDIHIIDDKAIVLGKA---------CDKGHRWMCSK 1116
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS--KSFLPLSASLD 1211
TIAD EA++GA+ G +AA A LKW+GI E E + +S+ +++LP +
Sbjct: 1117 TIADCFEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFE 1176
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYP 1269
M LE LG+ F +GLL++A HPS LG CY+RLEFLGDAVLD L+T YL++ +
Sbjct: 1177 M--LEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHK 1234
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE- 1328
G+LTDLRS VNN+ FA VAV +F+ FL S +L + I YV+ + S +
Sbjct: 1235 DTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVE 1294
Query: 1329 -VKEG-PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIREL 1386
+ +G P+ PKVLGD+VES GAILLD+ +L+ VW I L PI+ NL+L P REL
Sbjct: 1295 LLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYREL 1354
Query: 1387 LELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSK 1446
+E C + + +G +A V + K+V + + RK+A AS L
Sbjct: 1355 IEWCGKHGYFVGINCRDQGDTVVATLDV--QLKEVLLVRQGFSKKRKDAKAHASSLLLKD 1412
Query: 1447 LKAAGYV-----PKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQG 1501
L+ G + KT+ E S+ + +T + N + IS+P
Sbjct: 1413 LEEKGLILPKNASKTEQFEKHCGSTNPFNNLHVDAMDTHTPKPTKEKNAADSRNISDPL- 1471
Query: 1502 GSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFD----------CCKEEGLSHL 1551
+G P R LYELC W PT + C G S
Sbjct: 1472 -----LGKPLHVIVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQ 1526
Query: 1552 K----LFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREG 1598
K F F + + P +I G+ +A KK + + AA +L+ L+R G
Sbjct: 1527 KATPQAFAFASTITLHIPNADVISLTGDGRADKKSSQDSAALFLLYELQRRG 1578
>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
Length = 1986
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/1736 (30%), Positives = 808/1736 (46%), Gaps = 281/1736 (16%)
Query: 52 DKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKSICIF 110
+K P++ AR+YQL++ ++A ++N I +L TG GKT IAVLLI + + L + +K + +F
Sbjct: 320 EKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVF 379
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L P V LV QQA+VI E G++V +CG + W++E + +VLVM QILL
Sbjct: 380 LVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNI 439
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGK 228
L H IKME I LLI DECHHA K HPY+ +M +FY + P +FGMTASPV K
Sbjct: 440 LRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKERRPSVFGMTASPVNLK 497
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G S Q + I +LE+ LD+ V +++D ++LE V P V +Y D +++ +
Sbjct: 498 GVSNQIDCAIKIRNLESKLDSTVCTIKDRKELEKHVPMPSEVVVEY-----DKAATLWSL 552
Query: 289 SEQLAEI------------KREQYISALSRKLHDHQSLRNTTKQLNRLHD---------- 326
E + +I +R ++ +R + LR R
Sbjct: 553 HELIKQIEVEVEEAAKLSSRRSKWQLMGARDAGAREELRQVYGVSERTESDGAANLIQKL 612
Query: 327 -SMKFCLENLGVCGALHASYILLSG---DETMRNEL-IEAEGNTIDDSLCRFASQASEVF 381
++ + L LG A + L+ DE +L ++ + + ++ + Q SE
Sbjct: 613 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLNKVVALLQCQLSE-- 670
Query: 382 AAICRRDGIAS-----------DLSCIE----------------------VLKEPFFSKK 408
A+ +DGIAS +L IE + + + K
Sbjct: 671 GAVSDKDGIASVSEEDVANTRSNLDEIEEGELLDSHVVSGGEHVDEIIGAAVADGKVTPK 730
Query: 409 LLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSM 468
+ L+ IL ++ + + I+FV R+V+A L + L L+ + L+G N + M
Sbjct: 731 VQSLVKILLKYQYTEDFRAIIFVERVVSALVLPKVFAELPSLSFIKSASLIGHNNS-QDM 789
Query: 469 SRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP 528
M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P
Sbjct: 790 RTCQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKP 849
Query: 529 QSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD---------AFTCSEERIYK 579
S+Y +V+ GN ++N E+ + +E ++RT + + + +Y+
Sbjct: 850 GSDYILMVERGNLSHAAFLRNARNSEETLRKEAVERTDLSHLEDTSRLISMDTTPDTVYQ 909
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF--DDLGGTI---CHIILPANA 634
V+S+GA +S V L+H YCS+LP D + +P+F + GG C + LP NA
Sbjct: 910 VESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFVMVRHEKPGGPTEYSCKLQLPCNA 969
Query: 635 PIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSY 694
P + G SSM A++ CL A + LH++GA D LLP + + E E + + D D
Sbjct: 970 PFEDLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEKVEQNDDGDPL 1029
Query: 695 EGEGSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFIPDPADR-----IY 741
G E + V +L+ W + S++ + L Y +Q + + +
Sbjct: 1030 PGTARHREFYPEGVANILQGEWILTGRDTFSDSKF-LHLYMYTVQCVNVGSSKDLFLTQV 1088
Query: 742 REFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFN 801
F + S L E + +DL +AR + LV G+ + Q LK F+
Sbjct: 1089 SNFAVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLASLK------SFH 1142
Query: 802 SEFVPLGKDDYCESSSSTF-----YLLLPVIFHKNS-----VDWKIIRRCL--------- 842
+ + D E +++ + YL +PV+ K+ +DW ++RR +
Sbjct: 1143 VRLMSIVLDVDVEPTTTPWDPAKAYLFVPVVGDKSEDPVKEIDWVMVRRIIQTDAWNNPL 1202
Query: 843 -------------------------------------SSPVFGTPG-------------- 851
S P +G G
Sbjct: 1203 QRARPDVYLGTNERALGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLV 1262
Query: 852 ---GSVDRKSLPSH--GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS-- 904
G V+ + P G L + + + D+ +V A H + V +I ++ +
Sbjct: 1263 PDRGDVELQRHPDQPKGKLLMADTSMAVEDLVGRIVTAAHSGKRFYVDSIRYDTTAENSF 1322
Query: 905 PYKDS-----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLEDSESHE 958
P K+ + SS+ D+ YG+ L + QPL+R + + +NLL R + ++ES E
Sbjct: 1323 PRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPLIRGRGVSYCKNLLSPRFEHAENESEE 1382
Query: 959 L--EEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
+ Y+ LPPELC + + S G+ LPSIM R+E++L+AI+LKH+++ P
Sbjct: 1383 TLDKTYYVYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAIQLKHMINYPVP-- 1438
Query: 1017 AEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
A +L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R
Sbjct: 1439 ----ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPRKHEGQLTRMRQQ 1494
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICS--KETERTIHSQ----YD 1130
V+N L + A LQ YI+ F P ++ A G P K+ E + Q D
Sbjct: 1495 MVSNMVLYQYALSKKLQSYIQADRFAPSRWAAPGV-LPVYDEDMKDGESSFFDQDKSNSD 1553
Query: 1131 GRAPDDLNAEV------------RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
G + DL+ +V S + L KT+ADVVEAL+G + + G AA
Sbjct: 1554 GVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSSKTLADVVEALIGVYYVEGGKTAANHL 1613
Query: 1179 LKWIGIQVEFEASQVTNICISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHP 1236
+KWIGI+VEF+A +V C + +S LP S S+D LE L +F RGLL++A H
Sbjct: 1614 MKWIGIKVEFDAGEVE--CGTRQSNLPESILRSVDFDALEGALNIKFQDRGLLVEAITHA 1671
Query: 1237 SFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
S G CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV
Sbjct: 1672 SRPSCGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVK 1731
Query: 1296 QSFYKFLIFDSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAIL 1351
+ + L S+ L + I ++V D ++ P + PKVLGD+VES GAI
Sbjct: 1732 HNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIF 1791
Query: 1352 LDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAE 1411
LDSG + VW++ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1792 LDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLATVE 1851
Query: 1412 AKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEA 1471
+ G + A N +K A ++A++ + LK
Sbjct: 1852 VFIDGVQIGI-----AQNPQKKMAQKLAARNALAVLKEKEM------------------- 1887
Query: 1472 RLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCA 1531
D+ EK++ G G+ + T R L ++C
Sbjct: 1888 ----------------DDAKEKIE----DNGKKKKNGNQTFT---------RQTLNDICL 1918
Query: 1532 ANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAA 1587
W P + C E G +H K FTF V V EC+GEP K A + AA
Sbjct: 1919 RRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAKDSAA 1974
>gi|157285011|gb|ABV31245.1| dicer-like 3 [Physcomitrella patens]
Length = 1641
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/1495 (32%), Positives = 741/1495 (49%), Gaps = 175/1495 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR-KPQKSICIFLAPTVALV 118
R+YQ + + A+ +N I+YL TGCGKT +AVLLI LA R + K + +FLAPTV LV
Sbjct: 69 RRYQQQAFEAALNKNTILYLETGCGKTLVAVLLIKSLAKNTRLENDKRLIVFLAPTVILV 128
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQQA+VI V + G SK + S +W+ +I + EV+VM PQ+ L L H F+K
Sbjct: 129 QQQARVIRIHTDLNVGEYYG-SKNVDTWSRAEWQTQIAEVEVMVMTPQVFLNNLQHGFLK 187
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK--VPRIFGMTASPVVGKGASAQA 234
M ++ LLIFDECHHA NH YA+IMK FY ++ K +PRIFGMTASPV KG +
Sbjct: 188 MNIVELLIFDECHHAH--KNHAYAQIMKGFYHVNVDKGRLPRIFGMTASPVTKKGVKSSI 245
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN-DTSSSYVTCSEQLA 293
+ + LE+LL ++V++ +D E++E FV + V +Y N D + Y E L
Sbjct: 246 GAAEQLFGLEDLLKSEVFAFKDREEIE-FVVPTAITVEEYYDAPNLDILAPYKEEIEALI 304
Query: 294 ---EIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGALHASYILLS 349
E ++++ + D K+ NR H ++FCLE LG+ A A+ L
Sbjct: 305 IKFEKAHTDAVASVQAEFKDQTEFIYKLKERANRFHRDVQFCLEELGLWCASKAAEYLFK 364
Query: 350 GDETMRN--ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLS--CIEVLKEPFF 405
D + E I+A +L F + + + A+ + + + + +
Sbjct: 365 VDNGLEGFGEAIQA----FKRNLNLFMRETCGLLKSAVPEGWTAAQTAEELQDAVSKGYL 420
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL-ASWRCHFLVGVNAG 464
+ K+ LIG+L R + +K I+FV R + A L+Y++ +L+ L ++R + G + G
Sbjct: 421 TPKVYHLIGVLFHKRSMKDVKRIIFVERRMAAVVLAYLVNDLQCLRENFRSESICGASIG 480
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
+ +R + + F GE+NLLVAT++ EEG+D++ C VIRF+LP+T+ S IQSRGR
Sbjct: 481 PHT-TRREQQCTMTAFNKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRGR 539
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT--------CSEER 576
AR S Y ++ GN + D + E + E + R A + C +
Sbjct: 540 ARRSGSTYIVFLERGNGAQRDQFSKIXQSELSVRDEAISRVHIHASSAHNSCLPICEPLK 599
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI--CHIILPANA 634
Y+VD +GA ++ + L++R+CSKLP DE + PK + Y G + C I LP +
Sbjct: 600 TYRVDCTGASVNTETSIELVNRFCSKLPRDESYTPKAE--YLSQKVGLLYKCDIKLPFGS 657
Query: 635 PIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN--ATEDEPMLFSSDSD 692
PI++++G PQ + AK+ L+A LHK GAL+D LLP D A + E ++ +S
Sbjct: 658 PIYEVLGEPQRTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAADVEKIMQPKNSS 717
Query: 693 SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPA-DRIYREFGLFVKSL 751
+ G ++ ELH + W S L Y+M F P D ++ F L + +
Sbjct: 718 GF-GTTAQKELHSVAEAEAFTGHWHTSSSGAVLFAYYMSFDIHPVEDEMHANFVLLIGAA 776
Query: 752 LPGEAEHLKVDLHLARGRSVMTKLVPSG--IMQAQQFQEM-FLKVILDRSEFNSEFVPL- 807
L + L+++L L RGR KL P G + A Q + IL F+ P+
Sbjct: 777 LDDDVSKLEIELCLTRGRKAKAKLSPLGRTTLTADQLSNAKLFQTILFNGMFSKMIQPVQ 836
Query: 808 -GKDDYCESSSSTF-------------YLLLPVIFHKNS-------VDWKIIRRCLS--- 843
+ ES+ S+F YLLLP + ++ +DWKII+ S
Sbjct: 837 ENRKRKRESAISSFLTERMGLWKSNNAYLLLPAVLEGSNDVGTLAPIDWKIIQATSSVVK 896
Query: 844 ------SPVFG--------------TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVY 883
P F T S R+ P + N + S++ + V
Sbjct: 897 NLVLPEDPDFKHSQPRKRFKFLEILTRPFSFVRRKPPVNCLTFAGNHQVATSELVDVAVL 956
Query: 884 ATHKKWFYLVTNIVFEKNGYSPY---KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLF 940
H Y V ++ + +S + K+ + ++ + +G L+HP QPLL+ K
Sbjct: 957 TGHTGIIYPVLRVLHDTTAHSQFPGEKNREFKTYAEFFKIKHGRMLEHPNQPLLQLKQNH 1016
Query: 941 RLRNLL--------------HNRKLEDS-----ESHELEEYFD----------------- 964
R NLL +K++ + E+ +EE F+
Sbjct: 1017 RPHNLLPADAGKIEGPTGARKMKKIQKTEATLVEARSVEEDFEVYNMKDQANSSLSEVEK 1076
Query: 965 ------------DLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
++PPELC ++ FS I S LPS+MHR++++++A +L+ + A
Sbjct: 1077 VVSKATMQSTSVEMPPELCV--VLKFSAAIVRSAYWLPSVMHRIKSVVLASQLRRSIDA- 1133
Query: 1013 FPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTR 1072
++ +LKALTT +C E F++E LE+ GD+FLKYAV R LFL T +EG L+
Sbjct: 1134 ----PKIPVMEVLKALTTTRCNENFNMEALELFGDSFLKYAVSRKLFLESSTANEGVLST 1189
Query: 1073 RRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETE----RT 1124
RR ++ N L KLA L YIRD FDP ++ A G +R C ++ ++
Sbjct: 1190 RRIRSICNEALHKLAVDRGLSAYIRDCQFDPSRWAAPGMLAAKRVNCHCKEDNLLKPFKS 1249
Query: 1125 IHSQYDGRAPDDLNAE------------VRCSKGHHWLHKKTIADVVEALVGAFID-DSG 1171
S+ G ++L + + C KGH +L KTI+DV EAL+GA+++
Sbjct: 1250 TTSKVTGVFGNELLKDKIQTETIKPRIGLTCDKGHRYLCSKTISDVTEALIGAYLEYGRN 1309
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
+ A F+ W GI V F++ + +S L D+ E +G+ F + L L+
Sbjct: 1310 CEGALKFMTWAGIDVHFDSKLMEAASKASPVDLSYDYGEDLKAFEKRIGYTFKNIYLPLE 1369
Query: 1232 AFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
A H S N +G CYQRLEFLGDAVLD+L+T +L++ +P PG LT LR+ VNN+
Sbjct: 1370 ALTHFS-NMVGDQIRCYQRLEFLGDAVLDFLLTRHLFTSHPTSTPGLLTSLRTASVNNER 1428
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK----EGPRCPKVLGDLVE 1344
FA VAV + +L S L I +V ++ G PKVLGDLVE
Sbjct: 1429 FARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEAADDDQKNSSFGLNGLEAPKVLGDLVE 1488
Query: 1345 SSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQF 1399
S GAIL+D+ F+L+ VW +M+ L+PI+ + L ++P+ EL ELC S +++
Sbjct: 1489 SIAGAILVDTCFDLDKVWAVMMPLLEPIVTPATLDIHPVTELEELCMSKGYSIKY 1543
>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
[Cucumis sativus]
Length = 1987
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/1746 (30%), Positives = 810/1746 (46%), Gaps = 281/1746 (16%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LI 100
A+ S + K P++ AR+YQL++ ++A ++N I +L TG GKT IAVLLI + + L
Sbjct: 311 ADKSXPRRLKKKLPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQ 370
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVL 159
+ +K + +FL P V LV QQA+VI E G++V +CG + W++E + +VL
Sbjct: 371 TQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVL 430
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIF 218
VM QILL L H IKME I LLI DECHHA K HPY+ +M +FY + P +F
Sbjct: 431 VMTAQILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKERRPSVF 488
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVI 278
GMTASPV KG S Q + I +LE+ LD+ V +++D ++LE V P V +Y
Sbjct: 489 GMTASPVNLKGVSNQIDCAIKIRNLESKLDSTVCTIKDRKELEKHVPMPSEVVVEY---- 544
Query: 279 NDTSSSYVTCSEQLAEI------------KREQYISALSRKLHDHQSLRNTTKQLNRLHD 326
D +++ + E + +I +R ++ +R + LR R
Sbjct: 545 -DKAATLWSLHELIKQIEVEVEEAAKLSSRRSKWQLMGARDAGAREELRQVYGVSERTES 603
Query: 327 -----------SMKFCLENLGVCGALHASYILLSG---DETMRNEL-IEAEGNTIDDSLC 371
++ + L LG A + L+ DE +L ++ + + ++ +
Sbjct: 604 DGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLNKVVA 663
Query: 372 RFASQASEVFAAICRRDGIAS-----------DLSCIE---------------------- 398
Q SE A+ +DGIAS +L IE
Sbjct: 664 LLQCQLSE--GAVSDKDGIASVSEEDVANTRSNLDEIEEGELLDSHVVSGGEHVDEIIGA 721
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
+ + + K+ L+ IL ++ + + I+FV R+V+A L + L L+ + L
Sbjct: 722 AVADGKVTPKVQSLVKILLKYQYTEDFRAIIFVERVVSALVLPKVFAELPSLSFIKSASL 781
Query: 459 VGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+G N + M M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++
Sbjct: 782 IGHNNS-QDMRTCQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAY 840
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD---------A 569
IQSRGRAR P S+Y +V+ GN ++N E+ + +E ++RT +
Sbjct: 841 IQSRGRARKPGSDYILMVERGNLSHAAFLRNARNSEETLRKEAVERTDLSHLEDTSRLIS 900
Query: 570 FTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF--DDLGGTI-- 625
+ + +Y+V+S+GA +S V L+H YCS+LP D + +P+F + GG
Sbjct: 901 MDTTPDTVYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFVMVRHEKPGGPTEY 960
Query: 626 -CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEP 684
C + LP NAP + G SSM A++ CL A + LH++GA D LLP + + E E
Sbjct: 961 SCKLQLPCNAPFEDLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEKEK 1020
Query: 685 MLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFIPDP 736
+ + D D G E + V +L+ W + S++ + L Y +Q +
Sbjct: 1021 VEQNDDGDPLPGTARHREFYPEGVANILQGEWILTGRDTFSDSKF-LHLYMYTVQCVNVG 1079
Query: 737 ADR-----IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFL 791
+ + F + S L E + +DL +AR + LV G+ + Q L
Sbjct: 1080 SSKDLFLTQVSNFAVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLASL 1139
Query: 792 KVILDRSEFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHKNS-----VDWKIIRRC 841
K F+ + + D E +++ + YL +PV+ K+ +DW ++RR
Sbjct: 1140 K------SFHVRLMSIVLDVDVEPTTTPWDPAKAYLFVPVVGDKSEDPVKEIDWVMVRRI 1193
Query: 842 L----------------------------------------------SSPVFGTPG---- 851
+ S P +G G
Sbjct: 1194 IQTDAWNNPLQRARPDVYLGTNERALGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQ 1253
Query: 852 -------------GSVDRKSLPSH--GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
G V+ + P G L + + + D+ +V A H + V +I
Sbjct: 1254 FDVVKASGLVPDRGDVELQRHPDQPKGKLLMADTSMAVEDLVGRIVTAAHSGKRFYVDSI 1313
Query: 897 VFEKNGYS--PYKDS-----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR 949
++ + P K+ + SS+ D+ YG+ L + QPL+R + + +NLL R
Sbjct: 1314 RYDTTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPLIRGRGVSYCKNLLSPR 1373
Query: 950 -KLEDSESHEL--EEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ ++ES E + Y+ LPPELC + + S G+ LPSIM R+E++L+AI+LK
Sbjct: 1374 FEHAENESEETLDKTYYVYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAIQLK 1431
Query: 1007 HLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVD 1066
H+++ P A +L+ALT CQE F ER E+LGDA+LK+ V R LFL +
Sbjct: 1432 HMINYPVP------ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPRKH 1485
Query: 1067 EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICS--KETERT 1124
EG+LTR R V+N L + A LQ YI+ F P ++ A G P K+ E +
Sbjct: 1486 EGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAPSRWAAPGV-LPVYDEDMKDGESS 1544
Query: 1125 IHSQ----YDGRAPDDLNAEV------------RCSKGHHWLHKKTIADVVEALVGAFID 1168
Q DG + DL+ +V S + L KT+ADVVEAL+G +
Sbjct: 1545 FFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSSKTLADVVEALIGVYYV 1604
Query: 1169 DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS--ASLDMATLEILLGHQFLHR 1226
+ G AA +KWIGI+VEF+A +V C + +S LP S S+D LE L +F R
Sbjct: 1605 EGGKTAANHLMKWIGIKVEFDAGEVE--CGTRQSNLPESILRSVDFDALEGALNIKFQDR 1662
Query: 1227 GLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
GLL++A H S G CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VN
Sbjct: 1663 GLLVEAITHASRPSCGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVN 1722
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGD 1341
N+ FA VAV + + L S+ L + I ++V D ++ P + PKVLGD
Sbjct: 1723 NENFARVAVKHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGD 1782
Query: 1342 LVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPS 1401
+VES GAI LDSG + VW++ L P++ L ++P+REL E C L++ +
Sbjct: 1783 IVESIAGAIFLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKA 1842
Query: 1402 LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLES 1461
+ G E + G + A N +K A ++A++ + LK
Sbjct: 1843 TRIGNLATVEVFIDGVQIGI-----AQNPQKKMAQKLAARNALAVLKEKEM--------- 1888
Query: 1462 ILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRS 1521
D+ EK + G G+ + T
Sbjct: 1889 --------------------------DDAKEKXE----DNGKKKKNGNQTFT-------- 1910
Query: 1522 ARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKG 1581
R L ++C W P + C E G +H K FTF V V EC+GEP K
Sbjct: 1911 -RQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKK 1969
Query: 1582 AAEHAA 1587
A + AA
Sbjct: 1970 AKDSAA 1975
>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
Length = 1971
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/1739 (30%), Positives = 797/1739 (45%), Gaps = 283/1739 (16%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A + N I +L TG GKT IAVLLI + + L + +K + +FL P V L
Sbjct: 312 ARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVPKVPL 371
Query: 118 VQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V QQA+VI E G++V +CG + W++E + VLVM QILL L H IK
Sbjct: 372 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQILLNILRHSIIK 431
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQAN 235
ME I LLI DECHHA K HPY+ +M +FY K P +FGMTASPV KG S+Q +
Sbjct: 432 MEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVD 489
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
I +LE+ LD+ V +++D ++LE V P V +Y D +++ + EQ+ ++
Sbjct: 490 CAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEY-----DKAATLWSLHEQIKQM 544
Query: 296 ------------KREQYISALSRKLHDHQSLRNTTKQLNRLHD-----------SMKFCL 332
+R ++ +R + LR R ++ + L
Sbjct: 545 ELAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 604
Query: 333 ENLGVCGALHASYILLSG---DETMRNEL-IEAEGNTIDDSLCRFASQASEVFAAICRRD 388
LG A + L+ DE +L ++ + + ++ + Q SE A+ +D
Sbjct: 605 GELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSE--GAVSDKD 662
Query: 389 --------GIASDLSCIEVLKEPFF-------------------------SKKLLRLIGI 415
++ D S IE ++E + K+ L+ I
Sbjct: 663 KKVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKI 722
Query: 416 LSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKS 475
L ++ + + I+FV R+V A L + L L+ +C L+G N + M M+
Sbjct: 723 LLKYQQTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNS-QEMRTCQMQD 781
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+ KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y +
Sbjct: 782 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 841
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD---------AFTCSEERIYKVDSSGAC 586
V+ GN ++N E+ + +E ++RT + + +Y+V+S+GA
Sbjct: 842 VERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVESTGAI 901
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIHQIVG 641
+S V L+H YCS+LP D + +P+F + GG C + LP NAP ++ G
Sbjct: 902 VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG 961
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRG 701
SSM A++ CL A + LH++GA D LLP + + E E + + + D G
Sbjct: 962 PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHR 1021
Query: 702 ELHEMLVPAVLRQSWT-------KSQYPVRLNFYFMQFI-----PDPADRIYREFGLFVK 749
E + V VL+ W S V L Y ++ + DP +F +
Sbjct: 1022 EFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFG 1081
Query: 750 SLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGK 809
+ L E + +DL +AR LV G + + Q LK F+ + +
Sbjct: 1082 NELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLK------SFHVRLMSIVL 1135
Query: 810 DDYCESSSSTF-----YLLLPVIFHKN-----SVDWKIIRRCLSSPVFGTP--------- 850
D E S++ + YL +PV+ K+ +DW I+ R + + + P
Sbjct: 1136 DVDVEPSTTPWDPAKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNPLQRARPDVY 1195
Query: 851 ----------------------GGSVDRKSLPSHG------------------------- 863
G + +KS P++G
Sbjct: 1196 LGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGLVPNRETIEM 1255
Query: 864 ---------PLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS--- 909
L + +S D+ +V A H + V ++ ++ + P K+
Sbjct: 1256 MKGEDLTKGKLMMAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLG 1315
Query: 910 --DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE----EYF 963
+ SS+ D+ YG+ L + +QPL+R + + +NLL R E SE E Y+
Sbjct: 1316 PLEYSSYADYYRQKYGVELIYKQQPLIRGRGVSYCKNLLSPR-FEHSEGESDETLDKTYY 1374
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S + S LPSIM R+E++L+A++LK +++ P A
Sbjct: 1375 VFLPPELCFVHPLPGS--LVRSAQRLPSIMRRVESMLLAVQLKDVINYPVP------AAK 1426
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1427 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1486
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAP--------- 1134
+ A LQ YI+ F P ++ A G + ++T+ T S +D P
Sbjct: 1487 YQSALCKGLQSYIQADRFAPSRWAAPG--VLPVFDEDTKETESSLFDHERPFSETAPGND 1544
Query: 1135 ------DDLNAE----VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
DD E S + L KT+ADVVEAL+G + + G AA +KWIGI
Sbjct: 1545 RHGDGYDDDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGI 1604
Query: 1185 QVEFEASQVTNICISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG 1242
QVEF+ + +C + +P S S++ TLE L +F +RGLL++A H S G
Sbjct: 1605 QVEFDPEDI--VCATGPCNVPESILRSVNFDTLEGALNIKFNNRGLLIEAITHASRPSSG 1662
Query: 1243 -GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKF 1301
CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV +
Sbjct: 1663 VSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHIH 1722
Query: 1302 LIFDSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
L S+ L + I ++V D + P + PKVLGD+VES GAI LDSG +
Sbjct: 1723 LRHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1782
Query: 1358 LNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
VWK+ L P++ L ++P+REL E C L++ + + G E + G
Sbjct: 1783 TAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGV 1842
Query: 1418 DKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYD 1477
+ A N +K A ++A++ +LK +EA+
Sbjct: 1843 QIGI-----AQNPQKKMAQKLAARNAL----------------VVLKERETAEAK----- 1876
Query: 1478 ETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKP 1537
DD + G GS + T R L ++C W
Sbjct: 1877 -------EGDD-----------ENGKKKKNGSQTFT---------RQTLNDICLRRNWPM 1909
Query: 1538 PTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
P + C E G +H K FTF V V ECIGEP K A + AA +L L +
Sbjct: 1910 PVYRCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1968
>gi|356533095|ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1414
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/1390 (34%), Positives = 715/1390 (51%), Gaps = 106/1390 (7%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
D AR YQLE A+ EN IVYL TG GKT IAV+L+ AH +RKP I +FL P
Sbjct: 23 DVLSFARSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRSYAHHLRKPSPQIAVFLVP 82
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+ +++ KV + G W++E+ +YEV VM P ILL CL H
Sbjct: 83 KVVLVSQQAEAVKKHTDLKVGLYWGDMGIDFWDAATWKQEVQKYEVFVMTPAILLNCLRH 142
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVPRIFGMTASPVVGK 228
F+K+ LI +LI DECHHA+ K HPYA IM +FY I +PRIFGMTASP+ K
Sbjct: 143 SFLKLNLIKVLIMDECHHARGK--HPYASIMTEFYHHQLNSGISDLPRIFGMTASPIKSK 200
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYV 286
+ + + ++I L L+ +KVY+ L F+ S+P + YQ V S +
Sbjct: 201 VGNCELSWSENIRKLMTLMHSKVYTCVSEAVLTEFIPTSTPKFKFYQGNEV---QSVLFE 257
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+ +L +K EQ+ S L + ++ ++ ++ FCL+ LGV AL A+
Sbjct: 258 DLAFKLKMLK-EQHESNLKSSDFTKSAAEFARRRTKKIFSALIFCLDELGVWLALKAAES 316
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFS 406
L S D + + G+T+ + Q + + + I ++ +V E S
Sbjct: 317 LSSNDIQLFS--WGHSGDTVVKNFISAGVQTLKTYLPCGPQWSIGDNIK-YDVEME-LLS 372
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVNAG 464
K+ LI + +R M+CI+FV R++TA L +L L K+ SW+ F+ G N G
Sbjct: 373 SKVCCLIDSILEYRGLTDMRCIIFVERVITAVVLRDLLNTLLPKY-NSWKTKFIAGQNFG 431
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
L++ SR I+E+FR G +N++VAT + EEGLD+++C LVIRFD TV SFIQSRGR
Sbjct: 432 LQNQSRKKQNEIVEEFRMGLVNIIVATSILEEGLDVESCNLVIRFDPCHTVCSFIQSRGR 491
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI----YKV 580
ARM S+Y +V SG+ + + D M +E + +S E+R Y+V
Sbjct: 492 ARMQNSDYILMVKSGDSVTCSRLAKYLASGDIMRKESLRHSSLPCDPLEEDRFDKETYRV 551
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV 640
S+ A + +SL+H YCS+LP D +F P + +D GT + LP + P+ I
Sbjct: 552 ASTEAFANLSSSISLIHLYCSRLPADGYFKPTLR---WDKETGT---LYLPKSCPLQPI- 604
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSR 700
+ + K ACL+A + LHK+GAL+D L+P + +E + ++ Y+
Sbjct: 605 -RVEGDKKILKNIACLEACKQLHKIGALSDNLVP---DIVMEEAEVEELGNEPYD----- 655
Query: 701 GELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLPGEAEHL 759
E VP L S + + V + YFM+F D ++ L ++ L E +
Sbjct: 656 -ENQPTFVPFGLVNSVSNNSQTV-YHCYFMEFNNKFSYDVSVQDIFLLMRIELDPEIGCM 713
Query: 760 KVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDY 812
+ D+ RG + L P ++ ++FQ L++++D + N L + Y
Sbjct: 714 QFDMGFDRGSLSVNFRYKGTINLSPDQVLLCKKFQVTILRILIDH-DMNKLTAGLDR-CY 771
Query: 813 CESSSSTFYLLLPVIFHK--NSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP-LQLHN 869
E YLLLP + +++W + S V S H P ++ +
Sbjct: 772 LEDDLEIDYLLLPAMGKGKYTAINWLAVNSVNPSEV-----------SCKYHEPHIRTKS 820
Query: 870 GWSSESDVENSLVYATH---KKWFYLVTNIVFEKNGYSPY--KDSDSSSHVDHLISSYGI 924
G ++N+LV +H K FY+ T E +G SP + +++ + +GI
Sbjct: 821 GLVCSCKLQNALVCTSHPIGKISFYIATG-TMELDGNSPMELRGGGVTTYKKYYEQHHGI 879
Query: 925 HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGS 984
L+ Q LL+A+ +F+++N H RK + E+ + F +LPPELC + ++ S +
Sbjct: 880 QLQFEHQRLLKARHIFQVKNHCHGRK--QGKEGEVSKAFVELPPELCSIVMMPISDSLIY 937
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
S S +PSIMHR E+LL A LK + E+ +L+A+TT++C+E F E LE
Sbjct: 938 SYSFIPSIMHRFESLLGAFNLKK-MHLDHCARNEIQTIKVLEAITTKRCKEAFHYESLET 996
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+FLKYA + LF + EG L+ +R ++N+ L KL + L +IR++PFDP
Sbjct: 997 LGDSFLKYAASQQLFKTYHNHHEGLLSLKREKIISNAALCKLGCSSGLPGFIRNEPFDPN 1056
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
+ G + KE + Y G L +K +ADVVEAL+G
Sbjct: 1057 TWIIPGDKPRSFKLKELVAKGKTIY--------------VSGKRKLRQKIVADVVEALIG 1102
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF-LPLSASLDMATLEILLGHQF 1223
AF+ G KAA F+ W+GI+V F N + F + ++++ LE L + F
Sbjct: 1103 AFLSTGGEKAALLFMDWVGIKVSF------NKIPYDRHFDIQPEKLVNVSFLESQLNYSF 1156
Query: 1224 LHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
R LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY+ YP + PGQLTD+RS
Sbjct: 1157 HDRSLLVEAVTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNKYPGMTPGQLTDMRS 1216
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVL----SETINNYVDYMITPSSTREVKEGPRCPK 1337
VNN +A A+ +K ++ S L S T+N + ++ ST + PK
Sbjct: 1217 ASVNNDCYAWSAIKHGLHKHVLHASQELHMHVSATLNKFDK--LSSLSTFGYEAETSLPK 1274
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCN--SYDL 1395
VLGD+VES GAIL+DSG+N VW+ + L+P++ L+L+PIREL ELC SY +
Sbjct: 1275 VLGDIVESLAGAILVDSGYNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKI 1334
Query: 1396 DLQFPSLKKG 1405
L+ S K G
Sbjct: 1335 ILEDVSRKDG 1344
>gi|359476600|ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/1436 (32%), Positives = 749/1436 (52%), Gaps = 105/1436 (7%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
DP AR YQ+E +KA+++N IV+L TG GKT IA++L+ AHL+RKP I +FL P
Sbjct: 19 DPLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAHLLRKPSPFIAVFLVP 78
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+ ++ KV T+ G W KE D++EVLVM P ILL L H
Sbjct: 79 KVVLVPQQAEAVKMHTDLKVGTYWGDMGVDFWDAATWRKEQDKHEVLVMTPAILLNGLRH 138
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
F K+++I +LIFDECHHA+ K PYA IMK+FY + +PRIFGMTASP+ K
Sbjct: 139 SFFKLDMIKVLIFDECHHARGKD--PYACIMKEFYHEQVRSNNSNLPRIFGMTASPIKTK 196
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYV 286
G + + K++ LENL+++K+Y+ L FV S+P + Y+ + S+ +
Sbjct: 197 GVNDLMH-SKNMIELENLMNSKIYTSVSEAVLAEFVPFSTPKLTHYKDKDI---PSALFE 252
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+ QL EI + +Y +L + + K++++L + FCL +LG+ AL A+
Sbjct: 253 NVAHQL-EILKNKYEHSLESLNLMESTKESARKKISKLFSAFLFCLNDLGLWLALKAAEF 311
Query: 347 LLSGD-ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
D + ++ G I + + A + + R + DL + F
Sbjct: 312 SFCDDMDICCWGQLDLSGEEIIKNFNKDAYKVISTYLPSDRELSVGDDLEADA--ESGFL 369
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA-SWRCHFLVGVNAG 464
+ K++ L+G L +R ++++CIVFV R++TA L +L L W ++ G +
Sbjct: 370 TTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAGYIAGNASQ 429
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
L+S SR +++E+FR G +N++V+T + EEGLD+Q+C LVIRFD TV SFIQSRGR
Sbjct: 430 LQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGR 489
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAF----TCSEERIYKV 580
ARM S+Y +V SG+ + L ++ + M E + S + +E Y V
Sbjct: 490 ARMQNSDYLLMVKSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSLDDEEFYWV 549
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV 640
+S+ A ++ + LL+ YCS+LP D +F P P+ D+G C I P + PI +
Sbjct: 550 ESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDMG--TCTIYHPKSCPIQTV- 606
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSR 700
+ + +++ K+ ACL+A ++LHK GAL D L+PQ E+E ++ ++ Y+ E +
Sbjct: 607 -SVRGNIKTLKQIACLEACKELHKAGALTDNLVPQ---IVEEEAIVAQDENMPYDDEQAT 662
Query: 701 GELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLK 760
E++ P++ Y + L+ + ++ P + L V+S L + ++
Sbjct: 663 YYPPELINPSLKDPVTPYHCYLIELDQKY-EYEVSPQGIV-----LAVRSELEYDVGNVN 716
Query: 761 VDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEF--VPLGKDD 811
DL + RG ++ L ++ ++FQ L+V++DR+ F LG D
Sbjct: 717 FDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRVLIDRAIDKGVFDRYDLGNDQ 776
Query: 812 YCESSSSTFYLLLPVIFHK---NSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP-LQL 867
+ YL+LP + + VDWK CL S F S + P +
Sbjct: 777 MVD------YLMLPSTNSREIPSIVDWK----CLGSVFFSHENAS---NHMGCFFPRMHT 823
Query: 868 HNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDSDSSSHVDHLISSYGIH 925
+G+ ++NS+VY H FY +T I+ E NG S K+ ++ ++ +GI
Sbjct: 824 KSGFVCSCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGLLTYKEYYRLRHGIE 883
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSS 985
L+ + LL+ + +F ++N L ++ + EL +LPPELC + + S I S
Sbjct: 884 LQFDGEKLLKGRRMFVVQNYL--QRCRQQKEKELSNTTVELPPELCVIFMSPISISIIYS 941
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
SL+PSIMHR+E+LL+A+ LK+ + ++ + ++ +L+A+TT+ CQE F LE LE L
Sbjct: 942 FSLIPSIMHRIESLLLAVNLKN-IHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLETL 1000
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+FLKYA + LF EG L+ ++ ++N++L KL L +IR++ FDP +
Sbjct: 1001 GDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKK 1060
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ G + S G ++ S+ L K IADVVEAL+GA
Sbjct: 1061 WIIAGDQS------------RSHVFGEELLSSTRKIYVSERRK-LKSKRIADVVEALIGA 1107
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP--LSASLDMATLEILLGHQF 1223
F+ G AA F++W+GI V+F + + K P L ++++ LE +L + F
Sbjct: 1108 FLSTGGETAALIFMRWLGINVDF-------VKVPYKRDFPVILKRHVNVSYLESILNYSF 1160
Query: 1224 LHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
LL++A H S+ + CYQRLEFLGDAVLDYL+T +LY YP + PG LTDLRS
Sbjct: 1161 RDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRS 1220
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVLSE----TINNYVDYMITPSSTREVKEGPRCPK 1337
VNN +A AV ++ ++ S L T+ N+ + ST + PK
Sbjct: 1221 ASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPV--ESTFGWESESSFPK 1278
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDL 1397
VLGD++ES GAIL+DS +N V++ + L+P++ ++L+P REL ELC D+
Sbjct: 1279 VLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELGELCQKEHYDI 1338
Query: 1398 QFPSLKKGGK--FLAEAKVTG-KDKDVFISACATNLSRKEAIRIASQQLFSKLKAA 1450
+ + + GK E + G K K S ++ A ++AS+++ LK +
Sbjct: 1339 KRVVVSQNGKASVTIEVEANGAKHKHTSTS------DKRTATKLASKEVLKSLKES 1388
>gi|356532427|ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1421
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/1458 (33%), Positives = 739/1458 (50%), Gaps = 148/1458 (10%)
Query: 49 QKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSIC 108
Q D AR YQLE KA+ EN IVYL TG GKT IA++L+ AH +RKP I
Sbjct: 51 QNIAPDVLPFARSYQLEALYKAIHENTIVYLETGSGKTLIAIMLLRSYAHQLRKPSPYIA 110
Query: 109 IFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILL 167
+FL P V LV QQA+ ++ KV + G W++E++++EVLVM P ILL
Sbjct: 111 VFLVPQVVLVSQQAEAVKRHTDLKVGMYWGDMGVDFWDAATWKQEMEKHEVLVMTPAILL 170
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVPRIFGMTAS 223
CL H F K+ +I +LI DECHHA+ K HPYA IM +FY K I +PRIFGMTAS
Sbjct: 171 SCLRHSFFKLNMINVLIMDECHHARGK--HPYACIMTEFYHHQLKSGISDLPRIFGMTAS 228
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDT 281
P+ K ++++ ++I L L+ +KVY+ + F+ S+P + Y ++
Sbjct: 229 PIKSKVGKSESSWSENIQKLMILMHSKVYTCVSEAVITEFIPTSTPKFKFY------SNN 282
Query: 282 SSSYVTCSEQLAEIK--REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
+V E +++K +EQ+ L + K++ ++ S+ FCL+ LGV
Sbjct: 283 GIQFVLFEELASKLKMLKEQHELTLRSSDFTKSIAESAQKRITKIFCSLMFCLDELGVWL 342
Query: 340 ALHASYILLSGDETMRNELIEA--EGNTIDDSLCRFASQASEVFAAICR-------RDGI 390
AL A+ E++ + IE+ G++ D + F + + + D I
Sbjct: 343 ALKAA-------ESLSSNEIESFSWGHSGDRVVKDFILEGVHALKSYLQCDPQWSIGDNI 395
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--K 448
SD+ K + K+ L+ L +R M+CI+FV RI+TA L +L L K
Sbjct: 396 KSDV------KMGLLTSKVCCLVDSLLEYRGLTDMRCIIFVERIITAIVLEDLLNTLLPK 449
Query: 449 FLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+ SW+ F+ G N GL++ SR I+ +FR G +N++VAT + EEGLD+Q C LVIR
Sbjct: 450 Y-NSWKTKFIAGYNFGLQNQSRTKQNEIVNEFRMGLVNIIVATSILEEGLDVQRCNLVIR 508
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS-- 566
FD TV SFIQSRGRARM S+Y +V SG+ ++ + D M +E + +S
Sbjct: 509 FDPCPTVCSFIQSRGRARMRNSDYILMVKSGDSVTCSRLEKYLASADIMRKESLRHSSLP 568
Query: 567 SDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
D F E + Y V S+GA + +SL++ YCS+LP D +F P P+ +D GT
Sbjct: 569 CDPFEGDEFDKEAYHVSSTGAIANLSSSISLIYLYCSRLPADGYFKPAPR---WDKETGT 625
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEP 684
+ LP + P+ I + + + K ACL+A + LHK+GAL D L+P +
Sbjct: 626 ---LYLPKSCPLQPIC--VEGNKKHLKNIACLEACKQLHKIGALTDNLVPDIVIEEAEVE 680
Query: 685 MLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYRE 743
G E VP L S + + + + + Y M+ + D ++
Sbjct: 681 EF---------GNEPYDENQPTFVPFGLVNSVSNNSHTI-YHCYLMELSQNFSYDISVQD 730
Query: 744 FGLFVKSLLPGEAEHLKVDLHLARGRSVM-------TKLVPSGIMQAQQFQEMFLKVILD 796
L ++ L E + D+ RG + L P+ ++ ++FQ L I+D
Sbjct: 731 IFLAIRIELDPEIGCTQFDMGFDRGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGSIID 790
Query: 797 RSEFNSEFVPLGKDDYCESSSSTFYLLLPVI--FHKNSVDWKIIRRCLSSPVFGTPGGSV 854
S N L K Y E + YLLLP I K+ V+W I+ SV
Sbjct: 791 HS-MNKLATSLDK-CYLEDNVEIDYLLLPAIGKGEKSHVNWLAIK-------------SV 835
Query: 855 DRKSLPS--HGP-LQLHNGWSSESDVENSLVYATH---KKWFYLVTNIVFEKNGYSPY-- 906
+ S H P ++ +G ++++LV +H K +FY+ T I+ E +G SP
Sbjct: 836 EPSSFTCKYHQPHIETKSGLVCTCKLQDALVCTSHPGGKIYFYITTGIM-ELHGNSPMEL 894
Query: 907 KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDL 966
+ + +++ + +GI L+ Q LL+A+ F+++N H +K + E + F +L
Sbjct: 895 RGGEVTTYKKYYEQHHGIQLQFENQWLLKARHHFKVKNYCHGQK--QGKDGEASKAFVEL 952
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
PPELC + + I + S +PSIMHRLE+LL A LK + + E+ +L+
Sbjct: 953 PPELCSIVMSPIKDSIIYTFSFIPSIMHRLESLLGAFNLKKMHLDHCTQN-EIQTIKVLE 1011
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
A+TT++C E F E LE LGD+FLKYA + LF + EG L+ +R ++N+ L KL
Sbjct: 1012 AITTKRCNEAFHYESLETLGDSFLKYAASQQLFKTYKNHHEGLLSVKREKIISNAALCKL 1071
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
+ L +IR++PFDP + TI G P+ L E KG
Sbjct: 1072 GCSSGLPGFIRNEPFDPHAW-----------------TI----PGDKPESLKLEELVIKG 1110
Query: 1147 HHW-------LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICIS 1199
L++K IADVVEAL+GAF+ G +A F+ W+GI+V F+ I
Sbjct: 1111 KKIYVHGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKVSFD-----KIPYE 1165
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLD 1257
+ L++ LE L + F LL++A H S+ + CYQRLEFLGD+VLD
Sbjct: 1166 RHFDIQPEKLLNVRFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVLD 1225
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE----TI 1313
YLIT +LY+ YP + PGQLTD+R+ VNN +A A+ +K ++ S L + T+
Sbjct: 1226 YLITWHLYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHIAVTL 1285
Query: 1314 NNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
NN+ ++ SST + PKVLGD++ES GAIL+DSGFN VW+ + L+P++
Sbjct: 1286 NNFDK--LSSSSTFGYESEASPPKVLGDIIESLAGAILVDSGFNKEVVWQSIRPLLEPLV 1343
Query: 1374 KFSNLQLNPIRELLELCN--SYDLDLQFPSLKKG-GKFLAEAKVTGKDKDVFISACATNL 1430
L+L+PIREL ELC SY + L+ S K G + + + G + + A
Sbjct: 1344 TPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHEYEYTGPAL-- 1401
Query: 1431 SRKEAIRIASQQLFSKLK 1448
R A +IA +++ + LK
Sbjct: 1402 -RDTAKKIACKEILNSLK 1418
>gi|357448551|ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
gi|355483599|gb|AES64802.1| Endoribonuclease Dicer [Medicago truncatula]
Length = 1418
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/1415 (33%), Positives = 713/1415 (50%), Gaps = 153/1415 (10%)
Query: 44 SSVGAQKT---------DKDPKQI-------ARKYQLELCKKAMEENIIVYLGTGCGKTH 87
S G+ KT D D +QI AR YQLE +KA+ EN IVYL TG GKT
Sbjct: 32 SKAGSSKTMEEALMEMDDYDEQQIRPNALPFARSYQLEALEKAIRENTIVYLETGSGKTL 91
Query: 88 IAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHC 147
IA++L+ A+ +RKP I +FL P V LV QQA+ + K+ + G
Sbjct: 92 IAIMLLRSYAYHLRKPSPYIAVFLVPKVVLVSQQAEALRNHTDLKIGMYWGDMGVDYWDG 151
Query: 148 D-WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF 206
D W+ E++++EVLVM P ILL CL H FIK+ +I +LI DECHHA HPYA IM +F
Sbjct: 152 DVWKGEMEKHEVLVMTPAILLSCLRHSFIKLSMIKVLIMDECHHA--AGRHPYACIMTEF 209
Query: 207 Y----KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLES 262
Y + I ++PRIFGMTASP+ K A++++ L KSI L L+ +KVY+ +
Sbjct: 210 YHHQLRSGITELPRIFGMTASPIKSKAANSESTLSKSIRELMTLMHSKVYTCVCDAVISQ 269
Query: 263 FV--SSPVVRVYQYGPVINDTSSSYVTCSE---QLAEIKREQYISALSRKLHDHQSLRNT 317
F+ S+P R Y+ D SY E +L E+K++ S L ++++
Sbjct: 270 FIPTSTPKFRFYR------DNGISYTLFEELAKRLNELKQQHERCITSSDL-TKSAVQSA 322
Query: 318 TKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAE----GNTIDDSLCRF 373
K++ R+ D+ FCLE LG+ AL A+ L S IE E G + D + +F
Sbjct: 323 HKKIARIFDASIFCLEELGIWLALKAAESLSS---------IEIETFLWGISGDQIVKKF 373
Query: 374 ASQASEVFAAICRRD---GIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVF 430
+S + D IA +++ L+ + K+ LI L +R M+CIVF
Sbjct: 374 SSATMMTLQSCIPSDPRWTIADNMN--SNLEMGLLTSKVCCLIECLLEYRGLTEMRCIVF 431
Query: 431 VNRIVTARALSYILQNL--KFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLL 488
V R++ A L +L L K+ SWR F+ G + L++ +R I+E+FR G +N++
Sbjct: 432 VERVIAAIVLEVLLNALLPKY-NSWRAKFIAGTGSKLQNQTRKIQNEIVEEFRKGLVNII 490
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN-------Q 541
VAT + EEGLD+Q+C LVIRFD TV SF+QSRGRARM S+Y +V SG+ +
Sbjct: 491 VATSILEEGLDVQSCNLVIRFDPSPTVCSFVQSRGRARMRNSDYILMVKSGDAVTRSRLE 550
Query: 542 RELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+ LD + KE R + + SD F E+ Y+V S+ A ++ G++L++ YCS
Sbjct: 551 KYLDGGQMMRKESLRYSSLPCESLESDRFN---EQAYRVASTEAVVNLSSGITLIYLYCS 607
Query: 602 KLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIED 661
+LP D +F P P +D G + LP + PIH I Q + K ACL+A +
Sbjct: 608 RLPSDGYFKPTP---MWDKHKGIL---YLPKSCPIHAI--HVQGDNKFLKNIACLEACKQ 659
Query: 662 LHKLGALNDYLLPQEDNATE------DEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQS 715
LHK+GAL D L+P +EP +S + SY VP L
Sbjct: 660 LHKIGALTDNLVPSIVVEEAEVEEFGNEP--YSEEQPSY-------------VPFELVNH 704
Query: 716 WTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMT-- 773
+ + + + D ++ L + L E ++ D+ RG +
Sbjct: 705 MSNNSSTIYYCYLIELKQNFSYDITVQDIFLATRVELDPEIGCMQFDMCFDRGSLAVNLR 764
Query: 774 -----KLVPSGIMQAQQFQEMFLKVIL----DRSEFNSEFVPLGKDDYCESSSSTFYLLL 824
L P ++ ++FQ L +++ D+ F+ ++ E YLLL
Sbjct: 765 YRGNINLSPDQVLLCKRFQVSILGILMNSKMDKESFSEKYS-------LEDDLEIDYLLL 817
Query: 825 P--VIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLV 882
P I SVDW I S + + + G++ + N+L+
Sbjct: 818 PSIAIEETPSVDWLTISSIHPSKI----------QCRYHAANILTEKGFACGCILRNALI 867
Query: 883 YATHKKWFYLVTNIVFEKNGYSPYK--DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLF 940
H Y+ ++ E +G SP + D + +++ + +GI L+ Q LL+A+ +F
Sbjct: 868 CTPHNGRTYITAGMM-ELDGNSPLEVGDGEVTTYKKYFGQKHGIQLRFEHQRLLKARHVF 926
Query: 941 RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
++N H + + F +LPPELC + + + S +PSIMHRLE+LL
Sbjct: 927 PVKNYCHGYSQAKDRGLNVSKTFVELPPELCSIIMSPVPLSTLYTFSFIPSIMHRLESLL 986
Query: 1001 VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
A K + P+ ++ +L+A+TT+ C+E F E LE LGD+FLKYAV + LF
Sbjct: 987 GAYNFKRMHLDYCPQN-KIQTFKVLEAMTTKSCKETFHYESLETLGDSFLKYAVSQQLFN 1045
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKE 1120
++ EG L+ +R + N+ L KL L +IR+ PFDP + G + S +
Sbjct: 1046 MYQNHHEGLLSVKREKIICNAALSKLGCDFRLPGFIRNDPFDPKTWIIPGVKSE---SFK 1102
Query: 1121 TERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLK 1180
E T+ ++GR ++G L +K +ADVVEAL+GAF+ G AA F+
Sbjct: 1103 LEETV---FNGRKI--------YTRGDRKLKRKVVADVVEALIGAFLSAGGEMAALLFMD 1151
Query: 1181 WIGIQVEFEASQVTNICISSKSFLPLSASL-DMATLEILLGHQFLHRGLLLQAFVHPSFN 1239
WIGI+V F NI + F+ +L ++ LE LL + F R LL++A H S+
Sbjct: 1152 WIGIKVNF------NIIPYERQFIACPDNLVNVRFLESLLKYSFRDRSLLVEALTHGSYM 1205
Query: 1240 --RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS 1297
+ CYQRLE+LGD+VLDYLIT +LY VYP + PGQLTD+RS VNN +A A+
Sbjct: 1206 LPDVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDCYAMSAIKVQ 1265
Query: 1298 FYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRC-PKVLGDLVESSLGAILLDSGF 1356
+K ++ S L + I +D SS+ E PKVLGD++ES GAI +DSG+
Sbjct: 1266 LHKHVLHASQELHKHIVATLDKFDDQSSSSFGWESEATFPKVLGDIIESLAGAIFVDSGY 1325
Query: 1357 NLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCN 1391
+ VWK + L+P++ L ++PIREL ELC
Sbjct: 1326 DKEAVWKSIRPLLEPLVTPDTLTIHPIRELNELCQ 1360
>gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:
Full=Dicer-like protein 2a; Short=OsDCL2a
gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
gi|108709535|gb|ABF97330.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|113549035|dbj|BAF12478.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|215701504|dbj|BAG92928.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1410
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/1453 (32%), Positives = 731/1453 (50%), Gaps = 140/1453 (9%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLNPH-NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L +++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRL----NKKHIEALDRKLHG-SSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L ++L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA----FT 571
SFIQSRGRARM S+Y LV G+ + F M E + S T
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENT 548
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E+ Y+V+S+ A ++ V L+H +CSKLP DE+FNP P+F D GT C + LP
Sbjct: 549 LCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRF-DIDKASGT-CTLHLP 606
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSD- 690
++P+ + + S+ K+ CLKA ++LH +GAL D LLP+ D ++EP + +
Sbjct: 607 KSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENK 664
Query: 691 --SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF-----MQFIPDPADRIYRE 743
SY P +W RL Y+ ++ P A
Sbjct: 665 IEQPSY-------------FPEEFVDNWRSFS---RLGIYYCYKISLEGCPKTASPTDIL 708
Query: 744 FGL-------FVKS--LLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVI 794
L F S LPG ++ V + + L ++ A++FQ L +
Sbjct: 709 LALKCDLGSDFTSSSFKLPGGQDNASVTMKYVG----IIHLNQEQVIIARRFQTTILSFL 764
Query: 795 L--DRSE-------FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSP 845
+ D E F+ VP+G YLLLP++ +DW ++ SSP
Sbjct: 765 IGDDHLEVSNGIKYFHEMQVPIG----------VVYLLLPLV--SGRIDWCSMKFS-SSP 811
Query: 846 VFGTPGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGY 903
++ + S LQ +G ++NS+V H FY+++ + + N
Sbjct: 812 IYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSC 871
Query: 904 SPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
P D ++ D+ + +G+ L QPLL ++RN LHN E + Y
Sbjct: 872 LPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHN-CYSKKEKEPGDRYS 930
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
+LPPELC++ + S + S +PSIM R++ +L++++LK L + + +V
Sbjct: 931 VELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQ-FDVPVLK 989
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L
Sbjct: 990 ILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAAL 1049
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
+LA +NL YI + F+P R C ER + + AP+ + ++ +
Sbjct: 1050 CQLACSSNLVGYIHAEEFNP-------RDWIIPCLDYDERD-NKKISFLAPNGMYSQRKM 1101
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF 1203
S + K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K
Sbjct: 1102 S-----IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKIS 1152
Query: 1204 LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLIT 1261
+ +++ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T
Sbjct: 1153 MKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFT 1212
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD--- 1318
Y YS YP P LTDLRS VNN +A+ AV K ++ S+ L ++ Y++
Sbjct: 1213 EYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFG 1272
Query: 1319 -YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN 1377
PS E G PKVLGD++ES GAI LDS + VW+ M L+P+
Sbjct: 1273 QSFTGPSYGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPET 1330
Query: 1378 LQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIR 1437
++ +P++ L E C+ + + G A+V K + SA + + A +
Sbjct: 1331 IEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARV--KAGETTYSATKSGPCKLVAKK 1388
Query: 1438 IASQQLFSKLKAA 1450
+AS+ + L A
Sbjct: 1389 LASKAVLKDLIAG 1401
>gi|414871006|tpg|DAA49563.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1517
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1585 (32%), Positives = 759/1585 (47%), Gaps = 212/1585 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR----KPQKSICIFLAPTV 115
R YQ+E+ A+ N I L TG GKT +A++L E H++R + + I +FLAPTV
Sbjct: 34 RGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLARE--HVLRARAGEALRRIVVFLAPTV 91
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYH 172
LV QQ +VI E C G+ + H + W++ I E++VM PQILL L H
Sbjct: 92 HLVHQQFEVIREYTDLDA-VECHGASGV-GHWNAKRWKEAIGTKEIVVMTPQILLDALRH 149
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
F+ M +++LLIFDECH A NHPY+ IMK+FY D P IFGMTAS
Sbjct: 150 AFLTMRVMSLLIFDECHRAC--GNHPYSLIMKEFY-IDSEWRPAIFGMTAS--------- 197
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
PV +S+ C Q+
Sbjct: 198 -------------------------------------------PVSKKGASTIEDCEAQI 214
Query: 293 AEIKREQYISALSRKLHDH---QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
A++ E + A + D +S K +N+ +D F L+NL S + +
Sbjct: 215 AQL--ELVLDAKVYIVEDRNELESFSTGAKVVNKYYDPYLFDLDNL-------ESKLQML 265
Query: 350 GDETMR--NELIEAEGNTIDDSL-CRFASQA--------------SEVFAAICRRDGIAS 392
+E ++ NE I NTIDDS C F+ ++ E F + + S
Sbjct: 266 FEEVVKIYNESI----NTIDDSEDCVFSKESLNLQVSYFKEALFLIEDFLPQGYGELMKS 321
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
+ E+ K+ + S K+ LI I +F + + C++FV RI TA+A+ ++ +
Sbjct: 322 ESGSAELTKKGYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNVNFSR 381
Query: 453 WRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
+ +L G + ++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP
Sbjct: 382 FSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLP 441
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR---TSSDA 569
TV S++QSRGRAR S Y +++ GN + + I + E + + + T S
Sbjct: 442 RTVCSYVQSRGRARKSSSSYVLMIERGNLAQQEHIFRIIRTEYYVKTFALHKQPNTPSLD 501
Query: 570 FTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHII 629
E+ IY V+S+GA I+A V+L+++YC KLP D ++ PKP F G C +
Sbjct: 502 LPLQEKYIYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCTLT 561
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSS 689
+P NA IVG P SS AK+ CL+A + LH+LG L+D+L+P +EPM +
Sbjct: 562 MPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVP-----LTEEPMDIDT 616
Query: 690 DSD-----SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREF 744
D+ S G R ELH + L +W V LN Y F D +Y F
Sbjct: 617 DTTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESETVILNAYTFDFRCDQEGELYAGF 676
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILD 796
L ++S+L + ++DL L + V T + P G +Q + FQE F I
Sbjct: 677 VLLMESVLDDDVARSEIDLFLIPNKMVYTTMTPCGKIQLNKEQLCKGKLFQEFFFNGIFG 736
Query: 797 R-------SEFNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSS 844
R E EF+ K + S YLLLP+ I H ++ W+ + C S
Sbjct: 737 RLFHGSRTDELQREFI-FTKGHEIQWGSDNMYLLLPLRNSSQIQHDPNIYWEAVESC-SG 794
Query: 845 PV-----FGTPGGSVDRKSLPSHGP-------LQLHNGWSSESDVENSLVYATHKKWFYL 892
V G+++ ++L SH + L N S V++S+V + H Y
Sbjct: 795 TVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYS 854
Query: 893 VTNIVFEKNGYSPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLL 946
V +++ +K + K S +S VD+ YGI ++HP QPLL K NLL
Sbjct: 855 VLDLILDKTADDSFDEMYNGKASPFASFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLL 914
Query: 947 HNR-KLEDSESH-----ELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
++ K +D + E E+ +PPEL L I + DI S LLPS+MHR+++L+
Sbjct: 915 FSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVATDILKSFYLLPSVMHRVQSLM 972
Query: 1001 VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
+A +L+ +S + + ++L+A+TT +C E FSLERLE+LGD+ LKY +G LFL
Sbjct: 973 LASQLRSNISYI----QRIPSSLILEAITTLRCCESFSLERLELLGDSVLKYVIGCDLFL 1028
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC--PRICS 1118
+ EG L+ RS AV N+ L K +LQ YIRD FDP ++ A G+ P C+
Sbjct: 1029 RYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYIRDAAFDPRRWVAPGQISLRPFPCN 1088
Query: 1119 KETERTIHSQYDGRAPDDLNAEVR--CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAAT 1176
E G DD + V C +GH W+ KT++D VEALVGA+ G AA
Sbjct: 1089 CGIETAFVPFNGGYISDDPSFVVGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAI 1148
Query: 1177 AFLKWIGIQV--EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFV 1234
++W GI V + E Q ++ LS D+ LE L + F +GLLL+A
Sbjct: 1149 WVMRWFGIDVRCDMELVQKAKYNSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAIS 1208
Query: 1235 HPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANV 1292
HPS LG CYQRLEFLGD+VLD LIT +LY+ + + PG+LTDLRS V+N+ FA
Sbjct: 1209 HPSVQELGVDYCYQRLEFLGDSVLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQA 1268
Query: 1293 AVDQSFYKFLIFDSNVLSETINNYVDYMIT-PSSTREVKEGPRC--PKVLGDLVESSLGA 1349
V + + L S +L E + YV + + + C PKVLGD++ES GA
Sbjct: 1269 VVRNNIHNHLQHGSGILLEQVTEYVRSNLEYHGKENQFLQQATCKAPKVLGDIMESITGA 1328
Query: 1350 ILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFL 1409
I +D F+++ VWKI+ L P++ L L P RELLELC+ ++ +G + +
Sbjct: 1329 IFIDVNFDVDLVWKIVEPLLSPMITPDKLALPPYRELLELCSHLGCFIESKCTSEGEELI 1388
Query: 1410 AEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGY-----VPKTKSLESILK 1464
E KV +D+ + A + + K A A+ ++ +K G + K L+ I+
Sbjct: 1389 IEMKVQLRDEQLI--AQGHDRNGKTAKANAAARILVDMKKRGLSLKQCISKANQLD-IVS 1445
Query: 1465 SSPKSE-ARLIGYDETP-------INVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGG 1516
S +SE L + P + + +A V LK+ D G P
Sbjct: 1446 SKLQSELTNLESRHDCPHMNGTLSLGLSSARAAVVLPLKM---------DKGGP------ 1490
Query: 1517 LQNRSARSRLYELCAANCWKPPTFD 1541
R+ L+ LC + W P F+
Sbjct: 1491 ------RTALFRLCKSLQWPIPEFE 1509
>gi|414871005|tpg|DAA49562.1| TPA: hypothetical protein ZEAMMB73_299457 [Zea mays]
Length = 1440
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/1453 (33%), Positives = 712/1453 (49%), Gaps = 175/1453 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR----KPQKSICIFLAPTV 115
R YQ+E+ A+ N I L TG GKT +A++L E H++R + + I +FLAPTV
Sbjct: 34 RGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLARE--HVLRARAGEALRRIVVFLAPTV 91
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYH 172
LV QQ +VI E C G+ + H + W++ I E++VM PQILL L H
Sbjct: 92 HLVHQQFEVIREYTDLDA-VECHGASGV-GHWNAKRWKEAIGTKEIVVMTPQILLDALRH 149
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
F+ M +++LLIFDECH A NHPY+ IMK+FY D P IFGMTAS
Sbjct: 150 AFLTMRVMSLLIFDECHRAC--GNHPYSLIMKEFY-IDSEWRPAIFGMTAS--------- 197
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
PV +S+ C Q+
Sbjct: 198 -------------------------------------------PVSKKGASTIEDCEAQI 214
Query: 293 AEIKREQYISALSRKLHDH---QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
A++ E + A + D +S K +N+ +D F L+NL S + +
Sbjct: 215 AQL--ELVLDAKVYIVEDRNELESFSTGAKVVNKYYDPYLFDLDNL-------ESKLQML 265
Query: 350 GDETMR--NELIEAEGNTIDDSL-CRFASQA--------------SEVFAAICRRDGIAS 392
+E ++ NE I NTIDDS C F+ ++ E F + + S
Sbjct: 266 FEEVVKIYNESI----NTIDDSEDCVFSKESLNLQVSYFKEALFLIEDFLPQGYGELMKS 321
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
+ E+ K+ + S K+ LI I +F + + C++FV RI TA+A+ ++ +
Sbjct: 322 ESGSAELTKKGYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNVNFSR 381
Query: 453 WRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
+ +L G + ++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP
Sbjct: 382 FSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLP 441
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR---TSSDA 569
TV S++QSRGRAR S Y +++ GN + + I + E + + + T S
Sbjct: 442 RTVCSYVQSRGRARKSSSSYVLMIERGNLAQQEHIFRIIRTEYYVKTFALHKQPNTPSLD 501
Query: 570 FTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHII 629
E+ IY V+S+GA I+A V+L+++YC KLP D ++ PKP F G C +
Sbjct: 502 LPLQEKYIYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCTLT 561
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSS 689
+P NA IVG P SS AK+ CL+A + LH+LG L+D+L+P +EPM +
Sbjct: 562 MPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVP-----LTEEPMDIDT 616
Query: 690 DSD-----SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREF 744
D+ S G R ELH + L +W V LN Y F D +Y F
Sbjct: 617 DTTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESETVILNAYTFDFRCDQEGELYAGF 676
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILD 796
L ++S+L + ++DL L + V T + P G +Q + FQE F I
Sbjct: 677 VLLMESVLDDDVARSEIDLFLIPNKMVYTTMTPCGKIQLNKEQLCKGKLFQEFFFNGIFG 736
Query: 797 R-------SEFNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSS 844
R E EF+ K + S YLLLP+ I H ++ W+ + C S
Sbjct: 737 RLFHGSRTDELQREFI-FTKGHEIQWGSDNMYLLLPLRNSSQIQHDPNIYWEAVESC-SG 794
Query: 845 PV-----FGTPGGSVDRKSLPSHGP-------LQLHNGWSSESDVENSLVYATHKKWFYL 892
V G+++ ++L SH + L N S V++S+V + H Y
Sbjct: 795 TVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYS 854
Query: 893 VTNIVFEKNGYSPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLL 946
V +++ +K + K S +S VD+ YGI ++HP QPLL K NLL
Sbjct: 855 VLDLILDKTADDSFDEMYNGKASPFASFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLL 914
Query: 947 HNR-KLEDSESH-----ELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
++ K +D + E E+ +PPEL L I + DI S LLPS+MHR+++L+
Sbjct: 915 FSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVATDILKSFYLLPSVMHRVQSLM 972
Query: 1001 VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
+A +L+ +S + + ++L+A+TT +C E FSLERLE+LGD+ LKY +G LFL
Sbjct: 973 LASQLRSNISYI----QRIPSSLILEAITTLRCCESFSLERLELLGDSVLKYVIGCDLFL 1028
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC--PRICS 1118
+ EG L+ RS AV N+ L K +LQ YIRD FDP ++ A G+ P C+
Sbjct: 1029 RYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYIRDAAFDPRRWVAPGQISLRPFPCN 1088
Query: 1119 KETERTIHSQYDGRAPDDLNAEVR--CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAAT 1176
E G DD + V C +GH W+ KT++D VEALVGA+ G AA
Sbjct: 1089 CGIETAFVPFNGGYISDDPSFVVGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAI 1148
Query: 1177 AFLKWIGIQV--EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFV 1234
++W GI V + E Q ++ LS D+ LE L + F +GLLL+A
Sbjct: 1149 WVMRWFGIDVRCDMELVQKAKYNSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAIS 1208
Query: 1235 HPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANV 1292
HPS LG CYQRLEFLGD+VLD LIT +LY+ + + PG+LTDLRS V+N+ FA
Sbjct: 1209 HPSVQELGVDYCYQRLEFLGDSVLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQA 1268
Query: 1293 AVDQSFYKFLIFDSNVLSETINNYVDYMIT-PSSTREVKEGPRC--PKVLGDLVESSLGA 1349
V + + L S +L E + YV + + + C PKVLGD++ES GA
Sbjct: 1269 VVRNNIHNHLQHGSGILLEQVTEYVRSNLEYHGKENQFLQQATCKAPKVLGDIMESITGA 1328
Query: 1350 ILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFL 1409
I +D F+++ VWKI+ L P++ L L P RELLELC+ ++ +G + +
Sbjct: 1329 IFIDVNFDVDLVWKIVEPLLSPMITPDKLALPPYRELLELCSHLGCFIESKCTSEGEELI 1388
Query: 1410 AEAKVTGKDKDVF 1422
E KV +D+ +
Sbjct: 1389 IEMKVQLRDEQLI 1401
>gi|242076428|ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
gi|241939333|gb|EES12478.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
Length = 698
Score = 640 bits (1652), Expect = e-180, Method: Compositional matrix adjust.
Identities = 361/697 (51%), Positives = 473/697 (67%), Gaps = 64/697 (9%)
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
E+F +LPPELC LKI GFSKD+GSSLSLLPS+M RLENLLVAIELK+++S+ FPE +++S
Sbjct: 2 EHFVELPPELCSLKITGFSKDMGSSLSLLPSLMCRLENLLVAIELKNVMSSYFPEASQIS 61
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
A +L+ALTTE+C ER SLERLE+LGDAFLKY VGRH F+ ++ +DEG+LTRRRS+ V+N
Sbjct: 62 ASGILEALTTERCLERISLERLEVLGDAFLKYVVGRHNFISYEGLDEGQLTRRRSDIVSN 121
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDL-NA 1139
SNL +L+ R NLQVYIRDQ F+P QFFALGR C +C+ + E T+H + PD N
Sbjct: 122 SNLYELSIRRNLQVYIRDQHFEPTQFFALGRPCKVVCNPDREATLHPK--NIDPDRRENC 179
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICIS 1199
+RC+K HHWLH+KTIADVVE+L+GAF+ + GFKAA AFL+WIGI+V+FE S + + +
Sbjct: 180 NLRCTKSHHWLHRKTIADVVESLLGAFLVECGFKAAFAFLRWIGIKVDFENSALYRVLDA 239
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDY 1258
S + L L ++++ LE L+G+ F H+GLLLQAFVHPSFN+ GGCYQR+EFLGDAVLDY
Sbjct: 240 SSTNLSLMNYMNISELEELIGYTFKHKGLLLQAFVHPSFNKHSGGCYQRMEFLGDAVLDY 299
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
L+ SYLYS YP LKPGQLTDL+S+ +NN +FA VAV +S +K+LI DS L+ IN + +
Sbjct: 300 LMASYLYSAYPDLKPGQLTDLKSLALNNNSFAYVAVKKSIHKYLIKDSKSLTAAINKFQN 359
Query: 1319 YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNL 1378
Y+ SS +++ E P CPKVLGD+VES +GA+LLDSGFNLN VWK+ML L PIL F +
Sbjct: 360 YVNLSSSEKDLLEEPTCPKVLGDIVESCVGAVLLDSGFNLNHVWKLMLMLLKPILSFCGM 419
Query: 1379 QLNPIRELLELC--NSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAI 1436
++P+REL E+C N ++L L P+ + G+F + +V K IS A N + K+A
Sbjct: 420 HIDPMRELREICQYNGFELGLPKPT-EDNGEFHVKVEVNIDGK--MISCTAANRNSKDAR 476
Query: 1437 RIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADD-------- 1488
++A+Q+ KLK GY K KSLE IL+++ K E+ LIGYDE PINV DD
Sbjct: 477 KVAAQEALLKLKNNGYKHKRKSLEEILRATTKKESELIGYDEEPINV--EDDIQMKNLLI 534
Query: 1489 ------NVFEKLKISEPQGGSSCDIGS-----------------------------PSLT 1513
N+F + K G S I S P
Sbjct: 535 NGEMEGNIFFQNKEVSLNGRSETSIQSTTGDNKVDKNDANNGRNNKSNVVVQNGCLPRGA 594
Query: 1514 T---------GGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEA 1564
T G + ++ARS LYELCAAN WKPP F+ CK EG SHL+ FT +V+++I
Sbjct: 595 TDKTNQREYHGDMVRKTARSFLYELCAANYWKPPDFELCKGEGPSHLRKFTCKVLIQITG 654
Query: 1565 PE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
++EC +P+ +KK A EHAAEG LW L++ GYL
Sbjct: 655 TSATLLECYSDPKLQKKAAHEHAAEGALWYLKQLGYL 691
>gi|224101241|ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 491/1509 (32%), Positives = 760/1509 (50%), Gaps = 152/1509 (10%)
Query: 48 AQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI 107
Q+ DP AR YQLE +KA++ N IV+L TG GKT IA++L+ A+L+RKP + I
Sbjct: 11 TQQLPADPLPFARSYQLEALEKALKHNTIVFLETGSGKTLIAIMLLRSYAYLLRKPSRFI 70
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQIL 166
+FL P V LV+QQA +E KV + G + W+KEI+++EVLVM PQIL
Sbjct: 71 AVFLVPQVVLVRQQAGAVEMHTDLKVGMYWGEMGVDFWNAATWKKEIEKHEVLVMTPQIL 130
Query: 167 LYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTA 222
L L H F K++LI ++I DECHH + K HPYA IM +F+ ++ +PRIFGMTA
Sbjct: 131 LNGLRHSFFKLDLIKVMIVDECHHTRGK--HPYASIMTEFFHCELKSGHHDLPRIFGMTA 188
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYS-------VEDAEDLES----------FVS 265
SP+ KGA+++ + I LE+++++K+ S ++D +D +S
Sbjct: 189 SPIKSKGANSELYYWQQIRELEDIMNSKLLSPFAFGSLLQDEDDPHGTFQMHSTNIHVIS 248
Query: 266 SPVVRVYQYGPVINDTSSSYVTCSEQ--LAE----------------IKREQYISALS-- 305
+V++ I T TC + LAE I + S L
Sbjct: 249 HSCSKVFE--NCIPGTRHMIYTCVSESALAEFIPFSTPKFLFYEHMKIPDGIFASLLKEL 306
Query: 306 ---RKLHDHQ---------SLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD-- 351
R H+H + + +++++H ++ FCLE LGV A A+ L D
Sbjct: 307 GNLRTKHEHMLEQLDLNESAAVSICNKISKVHSALMFCLEELGVWLAFQAAQFLSHCDTD 366
Query: 352 -ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG----IASDLSCIEVLKEPFFS 406
+ + ++ G TI + C+ AS A + C DG I ++ L +
Sbjct: 367 GDFISGGKLDVSGETIVKNFCQDASLA----ISNCFSDGQECSIGDNIKA--HLGAGLLT 420
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL-KFLASWRCHFLVGVNAGL 465
K+L L+ L +R + ++CIVFV R++TA L +L L SW+ ++ G N+GL
Sbjct: 421 SKILCLVESLLQYRDLKEIRCIVFVERVITAIVLESLLSKLLPKHGSWKTKYIAGNNSGL 480
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+S +R I+E+FR G +N++VAT + EEGLD+Q+C LVIRFD TV+SFIQSRGRA
Sbjct: 481 QSQTRKIQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPSATVSSFIQSRGRA 540
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS------EERIYK 579
RM S+Y +V G+ ++N+ D M RE + S CS ++ Y+
Sbjct: 541 RMQNSDYLLMVKRGDFSTHARLENYLASGDIMRRESLRHAS---IPCSPLLDELDDEFYR 597
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
V+ +GA +S VSL++ YCS+LP D +F P P+ D C + LP ++P+ I
Sbjct: 598 VEGTGAVVSLSSSVSLIYFYCSRLPSDGYFKPAPRCII--DKETMTCTLHLPKSSPVQTI 655
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGS 699
Q +++ K+ ACL+A + LH GAL D L+P + +E + ++ Y+ E
Sbjct: 656 C--VQGNIKTLKQKACLEACKKLHVSGALTDNLVP---DIVMEEAVAEDVGNERYDDEQP 710
Query: 700 RGELHEMLVPAVLRQSWTKSQ-YPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEA-E 757
L LV R TK Y + LN F IP + L V++ L +
Sbjct: 711 I-YLPPELVSRGPRNLKTKYYCYLIELNQNFAYDIP------VHDVVLVVRTELESDVIR 763
Query: 758 HLKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
+ DL RG + L ++ ++FQ KV+LD S + V G D
Sbjct: 764 SMGFDLEAERGLLTVNLRYIGDIDLERVLVLLCRRFQITLFKVLLDHSVNKLKEVLEGLD 823
Query: 811 DYCESSSSTFYLLLPVI--FHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLH 868
S + Y LLP + S++W I L S + ++ +H +Q
Sbjct: 824 --LGSGAEIDYFLLPAFRSCSQPSINWAPISSVLFS--YKNEEHFNCSRNGNAH-VVQTK 878
Query: 869 NGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYK--DSDSSSHVDHLISS----- 921
G ++NSLV H Y +T + + NG S K D + ++ ++
Sbjct: 879 CGPVCACVLQNSLVCTPHNGNIYCITGVFEDLNGNSLLKMGDGGAITYKEYFAKRPMSDL 938
Query: 922 -------YGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+GI L ++PLL+ K +F + NLL NR + E + + LPPELC++
Sbjct: 939 KLTLDFRHGIQLLFNREPLLKGKHIFPVHNLL-NRCRKQKEKASKNTHVE-LPPELCEII 996
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQ 1034
+ S S + +PSIMHRLE+LL+A+ LK + S + + + + +L+A+TT KCQ
Sbjct: 997 LSPISISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHYLQHVNIPSMKVLEAITTNKCQ 1056
Query: 1035 ERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
E F+LE LE LGD+FLKYA + LF ++ EG L+ ++ ++N+ L + + LQ
Sbjct: 1057 ENFNLESLETLGDSFLKYAASQQLFKIYQNHHEGLLSFKKDKIISNAALCRRGCNHKLQG 1116
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR++ FDP + G + + S + P ++ +G + KT
Sbjct: 1117 FIRNESFDPKLWIIPGGK------------LGSDFLSEEPLSKGRKIYI-RGRRKVKSKT 1163
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT-NICISSKSFLPLSASLDMA 1213
IADVVEAL+GA++ G A F+ WIGI+V+F + +I + ++ F +++
Sbjct: 1164 IADVVEALIGAYLSTGGEVTALLFMDWIGIKVDFMNTPYERHIQLQAEKF------VNVR 1217
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
LE LL + F LL++A H S+ + CYQRLEFLGDAVLDYLIT ++Y YP +
Sbjct: 1218 YLESLLNYSFNDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKEYPGM 1277
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--ITPSSTREV 1329
PG LTDLRS VNN +A AV + ++ S+ L + I V + + ST
Sbjct: 1278 SPGLLTDLRSASVNNDCYALSAVKVGLDRHILHASHDLHKHIVATVKKIQEFSLESTFGW 1337
Query: 1330 KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLEL 1389
+ PKVLGD++ES GAIL+DSG+N V++ + L+P++ L+L P+REL EL
Sbjct: 1338 ESETAFPKVLGDVIESLAGAILVDSGYNKEVVFESIRPLLEPLITPETLRLQPVRELNEL 1397
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
C D + P + + G+ A + + + AT + A ++AS+++ LK
Sbjct: 1398 CQRQHFDYKKPIVSRNGRN-ASVTIEVEANGLIFKHTATVADKTTAKKLASKEVLKALKE 1456
Query: 1450 AGYVPKTKS 1458
+ + T S
Sbjct: 1457 SNFATSTAS 1465
>gi|242039323|ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
gi|241920910|gb|EER94054.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
Length = 1586
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 529/1640 (32%), Positives = 788/1640 (48%), Gaps = 204/1640 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR----KPQKSICIFLAPTV 115
R YQ+E+ A+ N I L TG GKT +A++L E H++R + + I +FLAPTV
Sbjct: 27 RGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLARE--HVLRARAGETPRRIVVFLAPTV 84
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQ +VI E G S + W++ I E++VM PQILL L H F
Sbjct: 85 HLVHQQFEVIREYTDLDAVECHGASGVGDWNAKRWKEAIGSKEIVVMTPQILLDALRHAF 144
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
+ M +++LLIFDECH A NHPY++IMK+FY D P IFGMTASPV +GAS
Sbjct: 145 LTMCVMSLLIFDECHRAC--GNHPYSRIMKEFY-IDSEWRPAIFGMTASPVSKRGAS--- 198
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
++ED E ++ Q V+N + V E E
Sbjct: 199 ------------------TIEDCE----------AQIAQLELVLN----AKVYIVEDRNE 226
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
+ +S K +N+ +D F L++L S + + +E +
Sbjct: 227 L----------------ESFSTGAKIVNKYYDPYLFDLDDL-------ESKLQMLFEEVV 263
Query: 355 R--NELIEAEGNTIDDSLCRFASQAS---------------EVFAAICRRDGIASDLSCI 397
+ NE I G++ D C F S+AS E F + + S+
Sbjct: 264 KIYNESINTVGDSED---CLF-SKASLNLQVSYFKEALFLIEEFLPQGYGELMKSESGSA 319
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
E+ K + S K+ LI I +F + + C++FV RI+TA+A+ ++ + + +
Sbjct: 320 ELTKRGYVSSKVQTLINIFKSFGSSEEVLCMIFVERIMTAKAVERFMRGNVNFSRFSISY 379
Query: 458 LVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
L G + S+S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP TV S
Sbjct: 380 LTGGSTSKDSLSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCS 439
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR---TSSDAFTCSE 574
++QSRGRAR S Y +++ GN + + I + E + + + T S E
Sbjct: 440 YVQSRGRARRSSSSYVLMIERGNLVQQEHIFRIIRTEYYVKTFALHKQPNTPSLDLPLQE 499
Query: 575 ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANA 634
+ +Y V+S+GA I+A V+L+++YC KLP D ++ PKP F G C + +P NA
Sbjct: 500 KYMYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQCALTMPPNA 559
Query: 635 PIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSD-- 692
IVG P S+ AK+ CL+A + LH+LG L+D+L+P +EPM +D+
Sbjct: 560 AFRSIVGPPSSTCNLAKQLVCLEACKKLHELGELDDHLVP-----LTEEPMDIDTDTTDK 614
Query: 693 ---SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVK 749
S G R ELH ++ L +W V LN Y F D + F L ++
Sbjct: 615 KCVSGPGTTKRKELHGIINVHGLSGNWIHESETVILNSYTFDFRCDQEGETFAGFVLLME 674
Query: 750 SLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR---- 797
S+L + H ++DL L + V T + P G +Q + FQE F I R
Sbjct: 675 SVLDDDVAHSEIDLFLIPNKMVYTAITPCGKIQLNKEQLRKGKLFQEFFFNGIFGRLFHG 734
Query: 798 ---SEFNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPV--- 846
S EF+ K + S YLLLP+ I H ++ W+ + C S V
Sbjct: 735 SRTSGLQREFI-FRKGHEIQWGSDNMYLLLPLRNSSHIQHDLNIYWEAVESC-SGAVEQL 792
Query: 847 --FGTPGGSVDRKSLPSHGP-------LQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
G+++ ++L SH + L N S V++S+V + H Y V +++
Sbjct: 793 RNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLI 852
Query: 898 FEKNGYSPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-K 950
+ + K S SS VD+ YGI ++HP QPLL K NLL ++ K
Sbjct: 853 LDTTADDSFDEMYNGKASPFSSFVDYYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMK 912
Query: 951 LEDSESH-----ELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
+D + E E+ +PPEL L I + DI S LLPS+MHR+++L++A +L
Sbjct: 913 YQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVTTDILKSFYLLPSVMHRVQSLMLASQL 970
Query: 1006 KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTV 1065
+ +S + + + ++L+A+TT +C E FSLERLE+LGD+ LKY +G LFL +
Sbjct: 971 RRDISYT----QRIPSSLILEAITTLRCCETFSLERLELLGDSVLKYVIGCDLFLRYPMK 1026
Query: 1066 DEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKET 1121
EG L+ RS AV N+ L K +LQ YIRD FDP ++ A G R P C ET
Sbjct: 1027 HEGHLSDMRSKAVCNATLHKHGICRSLQGYIRDTAFDPRRWVAPGQISLRPFPCNCGIET 1086
Query: 1122 ERT-IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLK 1180
+Y P + + C +GH W+ KT++D VEALVGA+ G AA ++
Sbjct: 1087 AFVPFTGEYISDDPSFIVGK-PCDRGHRWMCSKTVSDCVEALVGAYYVGGGITAAIWVMR 1145
Query: 1181 WIGIQV--EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF 1238
W GI V + E Q ++ LS LE L + F +GLLL+A HPS
Sbjct: 1146 WFGIDVRCDMELVQKAKYNSNASQLCYLSKLKVFEELEAKLKYNFSVKGLLLEAVSHPSL 1205
Query: 1239 NRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
LG CYQRLEFLGD+VLD LIT +LY+ + + PG+LTDLRS LV+N+ FA V
Sbjct: 1206 QELGVDYCYQRLEFLGDSVLDLLITQHLYATHTDVDPGELTDLRSALVSNENFAQAVVRN 1265
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTRE--VKEGP-RCPKVLGDLVESSLGAILLD 1353
+ + L S +L E + YV + V++ + PKVLGD++ES GAI +D
Sbjct: 1266 NIHSHLQHGSGILLEQVTEYVRSSLEYHGKENEFVQQATFKAPKVLGDIMESITGAIFID 1325
Query: 1354 SGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAK 1413
FN++ VWKI+ L P++ L L P RELLELC+ ++ KG + + E
Sbjct: 1326 VNFNVDLVWKIVEPLLSPMITPDKLALPPYRELLELCSHLGCFIKSKCTSKGEELIIEMT 1385
Query: 1414 VTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGY-----VPKTKSLESILKSSPK 1468
V +D+ + A + +RK A A+ ++ LK G K K L+ I+ S +
Sbjct: 1386 VQLRDE--LLIAQGHDRNRKSAKAKAAARILVDLKKRGLSLKQCFSKAKQLD-IVSSELQ 1442
Query: 1469 SEARLIG----YDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARS 1524
SE LI YD +N L + + + + GG R+
Sbjct: 1443 SE--LISLESRYDCPDVN---------GSLSLEGLSSVRAAVVLPLKMDKGG-----PRT 1486
Query: 1525 RLYELCAANCWKPPTFDCCKE--------EGLSHLKLFTFRVIVEIEAPE-KIIECIGEP 1575
L+ LC W P F+ ++ +G++ +F + + P+ +I GE
Sbjct: 1487 ALFRLCKRLQWPIPEFEFVEQRFRTPIVLDGVTTTNFNSFVSTITLHIPDVTVITLQGER 1546
Query: 1576 QAKKKGAAEHAAEGMLWCLE 1595
+ KK + + A+ ML LE
Sbjct: 1547 RTDKKSSQDSASLVMLQKLE 1566
>gi|449442659|ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 1393
Score = 637 bits (1643), Expect = e-179, Method: Compositional matrix adjust.
Identities = 478/1454 (32%), Positives = 745/1454 (51%), Gaps = 138/1454 (9%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
DP AR YQLE +KA+++N +V+L TG GKT IA++L+ AH +RKP + +FL P
Sbjct: 15 DPLSFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFVAVFLVP 74
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+ ++ V + G W++EI+++EVLVM P ILL L H
Sbjct: 75 QVVLVTQQAEALKMHTDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLVMTPAILLNGLRH 134
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
F ++ +I +LI DECHHA+ K HPYA IM +FY + +PRIFGMTASP+ K
Sbjct: 135 SFFRLSMIKVLILDECHHARGK--HPYACIMTEFYHQQLSLGKSDLPRIFGMTASPIKSK 192
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYV 286
G +++ N + I LE+LL++KVY+V +L +FV S+P + Y + D +
Sbjct: 193 GGNSELNYWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFY----IRKDIPYALY 248
Query: 287 TCSEQLA---EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHA 343
EQLA ++ + ++ +L + ++ T K++++ ++ +CL+ LG+ A
Sbjct: 249 ---EQLANALKVLKSKHEQSLENSDLNPSNVEPTRKRISKAFLALMYCLDELGLWLTWKA 305
Query: 344 SYIL-LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFA----AICRRDGIASDLSCIE 398
+ L D+ E ++ G I S C S A ++ A + C I +L
Sbjct: 306 AESLSWMEDDFSPWETLDIFGEAIVKSFC---SDALKLLANPVKSGCSYGSIGDNLEAD- 361
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCH 456
+ + K++ LI L +R + ++CIVFV RIV+A AL +L L K+ W+
Sbjct: 362 -MAAGLMTPKVVCLIASLLEYRSIEDIRCIVFVERIVSAVALQTLLSLLLPKY-TCWKTK 419
Query: 457 FLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
++ G +GL++ S+ I+E+FR G++N++VAT + EEGLD+Q+C LVIRFD TV
Sbjct: 420 YIAGSTSGLQTQSKKKQNEIVEEFRCGKVNIIVATSILEEGLDVQSCNLVIRFDPSSTVC 479
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAF---TCS 573
SFIQSRGRARM S+Y +V SG+ L ++ + + M E + S +
Sbjct: 480 SFIQSRGRARMKNSDYILMVKSGDSTTLSRLQRYLASGEIMRNESLCHASLPCVPFRSDY 539
Query: 574 EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPAN 633
+E Y V+S+GA ++ V L++ YCS+LP D +F P P++ C + LP +
Sbjct: 540 DEESYYVESTGAVVTLSSSVGLIYFYCSRLPSDCYFKPTPRW------DKETCTLHLPKS 593
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
+P+ + + + +K+ ACL+A + LHK GAL D L+PQ + + +S +
Sbjct: 594 SPLQTF--SSKDDAKYSKQRACLEACKQLHKCGALTDNLVPQ----------IVAEESVA 641
Query: 694 YE-GEGSRGELHEMLVPAVL------RQSWTKSQYPVRL--NFYFMQFIPDPADRIYREF 744
E G + + VP S Y + L NF++ D
Sbjct: 642 QEIGNKPLDDEQPIYVPPEFVHCCPHNSSVVYHCYLIELKQNFHY--------DISAHNI 693
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGR-------SVMTKLVPSGIMQAQQFQEMFLKVILDR 797
L +++ L E + + DL + RG + KL P ++ ++QFQ KV+L+
Sbjct: 694 VLAMRTELEFEVQSMCHDLDVDRGSFDVNFKYVGIIKLSPEQVLLSRQFQRTIFKVLLNH 753
Query: 798 SEFN--SEFVPLGKDDYCESSSSTF-YLLLPVIFHKNSVDWKIIRRCL-SSPVFGTPGGS 853
+ N SE ++ C YLLLP + W+I+ L SS + G
Sbjct: 754 TWTNKLSE-----NNEICLGDGPRVDYLLLPST-GGELISWEIVLSVLVSSQEYCVHRGI 807
Query: 854 VDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYK--DSDS 911
K + P + +G ++NS+VY H Y +T+++ E NG S K ++
Sbjct: 808 SSSKDVSYDVPTK--SGLVCICRLQNSVVYTPHNGHVYCITSVLSELNGNSLLKIRKNEM 865
Query: 912 SSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC 971
++ ++ +GI L+ KQPLLR K +F + N + R + E E +LPPELC
Sbjct: 866 MAYKEYYKVRHGIDLRFEKQPLLRGKKIFPVHNYI-KRFRKHKEQGESRNSLVELPPELC 924
Query: 972 QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE 1031
+ + S + S S LP IMHRLE++L+A LK L S + ++ +L+A+TT+
Sbjct: 925 SIIMSPISVNTLYSYSFLPFIMHRLESMLIASNLKKLNSDHCMQN-DIPTTKVLEAITTK 983
Query: 1032 KCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
KCQE+F+LE LE LGD+FLKYA G+HLF EG LT ++ V+N+ L + +
Sbjct: 984 KCQEKFNLESLETLGDSFLKYATGQHLFRTFQNDHEGLLTLKKDRIVSNAALRRRGCEHK 1043
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH 1151
+ +IRD+ FDP + G H Y R + + +
Sbjct: 1044 ISGFIRDEAFDPQNWDIPG-------------DTHEVYQLREEVLFSGRKVYVQRKRKIK 1090
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP------ 1205
K IADVVEAL+GA++ G KAA FL IGI+V F+ F+P
Sbjct: 1091 SKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFD-------------FVPYERPFR 1137
Query: 1206 --LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLIT 1261
+ +++ LE LL + F R LLL+A H S+ + CYQRLEFLGD+VLDY IT
Sbjct: 1138 VDVHKLINVGHLESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVLDYAIT 1197
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+LY+ YP + P LTD+RS V+N ++ A+ +K ++ S+ L + I++ V
Sbjct: 1198 VHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSHDLHKHISSAVQNFE 1257
Query: 1322 TPSS--TREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ 1379
T SS T + PKVLGD++ES GAI +DSG++ V++ + L+P++ L+
Sbjct: 1258 TLSSEATYGWESEISFPKVLGDVIESLAGAIYVDSGYDKEIVFRSIRPLLEPLVSPETLK 1317
Query: 1380 LNPIRELLELCN--SYDLDLQFPSLKKGGKFLA-EAKVTGKDKDVFISACATNLSRKEAI 1436
+P REL ELC +Y L S G ++ E +V G+ +L R+
Sbjct: 1318 KHPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGR----IFKHTEISLDRETGE 1373
Query: 1437 RIASQQLFSKLKAA 1450
++AS+++ LK A
Sbjct: 1374 KVASKEVLKSLKEA 1387
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 502/1568 (32%), Positives = 748/1568 (47%), Gaps = 219/1568 (13%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ 104
S G +K + AR YQLE+ +A E N I +L TG GKT IAVLL+ A L+++
Sbjct: 82 SAGKAGKEKVCVEQARAYQLEVLSQAEEGNTIAFLETGAGKTLIAVLLMKRKAELLQR-- 139
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG-------GSKRLKSHCDWEKEIDQYE 157
K + +FL P V LV QQA+VI E F V +CG SKR W++E E
Sbjct: 140 KILTVFLVPKVPLVYQQAEVIRERTNFNVGHYCGEMVQDFWDSKR------WQREFQSKE 193
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-PDIMKVPR 216
VLVM QILL L H ++ME I LLI DECHHA K HPY+ +M +FY K P+
Sbjct: 194 VLVMTAQILLNILRHSIVRMEDIDLLILDECHHAVKK--HPYSLVMSEFYHLAPKEKRPK 251
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
IFGMTASPV KG S Q + I +LE LD+ V ++ D ++LE V P V +Y
Sbjct: 252 IFGMTASPVNLKGVSNQEDCAVKIRNLETKLDSVVCTIRDRKELEKHVPMPSETVVEY-- 309
Query: 277 VINDTSSSYVTCSEQLAEIKRE--------------QYISA----LSRKLH------DHQ 312
D ++ + E++ ++K + Q++ A S +LH + +
Sbjct: 310 ---DKAAVLWSLREKIKQMKEQVEEACSASSKRTKWQFMGARDAGASDELHFVYGVAERK 366
Query: 313 SLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYIL--LSGDE-TMRNELIEAEGNTIDD 368
L +L S+ FCL+ LG C AS L L DE T + E I D
Sbjct: 367 ESDGAANLLQKLR-SIIFCLDELGQWCAYKVASSSLGNLRHDERTADVKYQELYLTKIVD 425
Query: 369 SL-CRF---ASQASEVFAA--------ICRRDGIASDLSCIEVLKEPFFSKKLL----RL 412
L C A+ +S++ A + + ++ EVL KK+ L
Sbjct: 426 MLKCDLQQGAASSSKLEAVHGDVEEGEVIDTNSLSGGEHFDEVLGAAVADKKVTPKVQSL 485
Query: 413 IGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNA 472
I IL + + I+FV+R+V A L +L L L R LVG N + +S
Sbjct: 486 IQILRKYEHVDDFRAIIFVDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNS-QDVSTRH 544
Query: 473 MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
M L KFR G LN+LVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S+Y
Sbjct: 545 MHDSLSKFRDGSLNVLVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGRARKPGSDY 604
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS---------EERIYKVDSS 583
+++ GN+ ++N E+ + +E +RT D +T + + Y+V S+
Sbjct: 605 ILMLEKGNKVHQSFLRNARNSEETLRKEATERTKLDPWTEAAIVASLEDGKGETYQVPST 664
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI----CHIILPANAPIHQI 639
GA ++ V L+H YCS+LP D + KP+F G + C + LP+NAP+
Sbjct: 665 GAMVTLNSAVGLIHFYCSQLPSDRYSILKPEFVLTKHSTGDVVYFSCKLRLPSNAPVESF 724
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGS 699
G S+M+ A++ CL+A + LH++ A D LLP + + + + +D G
Sbjct: 725 DGPVCSTMKGAQQAVCLEACKKLHEMAAFTDMLLPDTGTSDKSDKGEDNETTDPIPGTAR 784
Query: 700 RGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSL 751
E + L+ W + S Y +++ + F DP +F +
Sbjct: 785 YREYFPEGIADFLKGDWILNTNYLLSTSLYMYIIHYSNIGFSTDPLVTQTSDFAVLFGRE 844
Query: 752 LPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDD 811
+ E VDL +AR + LV SG+ + LK F+ + + D
Sbjct: 845 MDPEVLTASVDLFVARTLTTQASLVFSGVHHITSSELTLLKA------FHVRLMSIVLDV 898
Query: 812 YCESSSSTF-----YLLLPVIFH-KNSVDWKIIRRCLSSPVFGTP--------------- 850
E +S+ + YL +P+ +DW ++ L S + +P
Sbjct: 899 DVEPASTPWDSNKAYLFVPLTSSCTKQIDWALMNEVLGSHAWSSPLQRARPDVFLGTNER 958
Query: 851 --GGSVDRKSL-------------PSHG-----------------PLQ-----------L 867
GG DR+ P++G PL+ L
Sbjct: 959 ALGG--DRREYGFSKLRSNGVQKHPTYGIRGAVAEFDVIKASGIAPLREKLEPEGRQLLL 1016
Query: 868 HNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDS-------SSHVDHLIS 920
+G+++ +++ LV A H + V +++ E SP+ + SS+ D+
Sbjct: 1017 ADGYANMDEMDGKLVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQ 1076
Query: 921 SYGIHLKHPKQPLLRAKPLFRLRNLLHNR--KLEDSESHELEEYFDDLPPELCQLKIIGF 978
YG+ L QP+LR + + +NLL R LE SE + Y+ LPPE+C + +
Sbjct: 1077 KYGVRLHCRHQPMLRCRGVSHCKNLLSPRFKLLESSEELSDKTYYVMLPPEICLVHPLPG 1136
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFS 1038
G+ LPS+M R+E++L+A++LKH + FP + A +L+ALT CQE FS
Sbjct: 1137 CLVRGAQR--LPSVMKRVESILLAVQLKHEIG--FP----IPAAKVLEALTAASCQETFS 1188
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ER E+LGDA+LK+ V R LF+ H EG+LTR R V+N L + A +LQ YI+
Sbjct: 1189 YERAELLGDAYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQS 1248
Query: 1099 QPFDPCQFFALG------------------RRCPRICSKETERTIHSQYDGRAPDDL--- 1137
F P ++ A G P+ S+ ER+ S + DD
Sbjct: 1249 DRFAPSRWAAPGVPPVFDEDLKDSNLDNEAAEVPK-ASEHEERSTKSSGEEEVLDDSTSL 1307
Query: 1138 -NAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF---EASQ 1192
+ E S + L KT+ADVVEAL+G + + G KAA F+ WI I +++ EA+
Sbjct: 1308 EDGEAEWDSSSYRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWISIPIDYDEAEANA 1367
Query: 1193 VTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFL 1251
C S + S+D LE+ +G++F + +L++A H S G CYQRLEF+
Sbjct: 1368 ARAGCSVPDSVM---NSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVPCYQRLEFV 1424
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GDAVLD+LIT YL+ Y L PG+LTDLR+ VNN+ FA ++V SF+ L S+ L
Sbjct: 1425 GDAVLDHLITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEA 1484
Query: 1312 TINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
I ++V + + + + PKVLGD++ES GAI LD+G + VWK+
Sbjct: 1485 QIKDFVKDIQSELDKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFER 1544
Query: 1368 FLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACA 1427
L+P++ L ++P+REL E C L++ + ++G E V G V I CA
Sbjct: 1545 LLEPMVTPDTLPVHPVRELQERCQQQAEGLEYRASREGSIATVEVFVDG----VQI-GCA 1599
Query: 1428 TNLSRKEA 1435
N +K A
Sbjct: 1600 QNTQKKMA 1607
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 510/1578 (32%), Positives = 751/1578 (47%), Gaps = 239/1578 (15%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ 104
S G +K + AR YQLE+ +A E N I +L TG GKT IAVLL+ A L+++
Sbjct: 82 SAGKAGKEKVCVEQARAYQLEVLSQAEEGNTIAFLETGAGKTLIAVLLMKRKAELLQR-- 139
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG-------GSKRLKSHCDWEKEIDQYE 157
K + +FL P V LV QQA+VI E F V +CG SKR W++E E
Sbjct: 140 KILTVFLVPKVPLVYQQAEVIRERTNFNVGHYCGEMVQDFWDSKR------WQREFQSKE 193
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-PDIMKVPR 216
VLVM QILL L H ++ME I LLI DECHHA K HPY+ +M +FY K P+
Sbjct: 194 VLVMTAQILLNILRHSIVRMEDIDLLILDECHHAVKK--HPYSLVMSEFYHLAPKEKRPK 251
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
IFGMTASPV KG S Q + I +LE LD+ V ++ D ++LE V P V +Y
Sbjct: 252 IFGMTASPVNLKGVSNQEDCAVKIRNLETKLDSVVCTIRDRKELEKHVPMPSETVVEY-- 309
Query: 277 VINDTSSSYVTCSEQLAEIKRE--------------QYISA----LSRKLH------DHQ 312
D ++ + E++ ++K + Q++ A S +LH + +
Sbjct: 310 ---DKAAVLWSLREKIKQMKEQVEEACSASSKRTKWQFMGARDAGASDELHFVYGVAERK 366
Query: 313 SLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYIL--LSGDE-TMRNELIEAEGNTIDD 368
L +L S+ FCL+ LG C AS L L DE T + E I D
Sbjct: 367 ESDGAANLLQKLR-SIIFCLDELGQWCAYKVASSSLGNLRHDERTADVKYQELYLTKIVD 425
Query: 369 SL-CRF---ASQASEVFAA--------ICRRDGIASDLSCIEVLKEPFFSKKLL----RL 412
L C A+ +S++ A + + ++ EVL KK+ L
Sbjct: 426 MLKCDLQQGAASSSKLEAVHGDVEEGEVIDTNSLSGGEHFDEVLGAAVADKKVTPKVQSL 485
Query: 413 IGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNA 472
I IL + + + I+FV+R+V A L +L L L R LVG N + +S
Sbjct: 486 IQILRKYEHVEDFRAIIFVDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNS-QDVSTRH 544
Query: 473 MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
M L KFR G LN+LVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S+Y
Sbjct: 545 MHDSLSKFRDGSLNVLVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGRARKPGSDY 604
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS---------EERIYKVDSS 583
+++ GN+ ++N E+ + +E +RT D +T + + Y+V S+
Sbjct: 605 ILMLEKGNKVHQSFLRNARNSEETLRKEATERTKLDPWTEAAIVASLEDGKGETYQVPST 664
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI----CHIILPANAPIHQI 639
GA ++ V L+H YCS+LP D + KP+F G + C + LP+NAP+
Sbjct: 665 GAMVTLNSAVGLIHFYCSQLPSDRYSILKPEFVLTKHSTGDVVYFSCKLRLPSNAPVESF 724
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----------EDNATEDEPMLFSS 689
G S+M+ A++ CL+A + LH++ A D LLP EDN T D P+ ++
Sbjct: 725 DGPVCSTMKGAQQAVCLEACKKLHEMAAFTDMLLPDTGTPDKSDKGEDNETTD-PIPGTA 783
Query: 690 DSDSYEGEGSRGELHEMLVPAVLRQSW---TKSQYPVRLNFYFMQ-----FIPDPADRIY 741
Y EG + L+ W T L Y +Q F DP
Sbjct: 784 RYREYFPEG---------IADFLKGDWILNTNYLLSTSLYMYIIQYSNVGFSTDPLVTQT 834
Query: 742 REFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFN 801
+F + + E VDL +AR + LV SG+ + LK F+
Sbjct: 835 SDFAVLFGREMDPEVLTASVDLFVARTLTTQASLVFSGVHHITSSELTLLKA------FH 888
Query: 802 SEFVPLGKDDYCESSSSTF-----YLLLPVIFH-KNSVDWKIIRRCLSSPVFGTP----- 850
+ + D E +S+ + YL +P+ +DW ++ + L S + +P
Sbjct: 889 VRLMSIVLDVDVEPASTPWDSNKAYLFVPLTSSCTKQIDWALMNKVLGSHAWSSPLQRAR 948
Query: 851 ------------GGSVDRKSL-------------PSHG-----------------PLQ-- 866
GG DR+ P++G PL+
Sbjct: 949 PDVFLGTNERALGG--DRREYGFSKLRSNGVQKHPTYGIRGAVAEFDVIKASGIAPLREK 1006
Query: 867 ---------LHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDS------ 911
L +G+++ +++ LV A H + V +++ E SP+ +
Sbjct: 1007 LEPEGRQLLLADGYANMDEMDGKLVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVE 1066
Query: 912 -SSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR--KLEDSESHELEEYFDDLPP 968
SS+ D+ YG+ L QP+LR + + +NLL R LE SE + Y+ LPP
Sbjct: 1067 YSSYADYYEQKYGVRLHCRHQPMLRCRGVSHCKNLLSPRFKLLESSEELSDKTYYVMLPP 1126
Query: 969 ELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKAL 1028
E+C + + G+ LPS+M R+E++L+A++LKH + FP + A +L+AL
Sbjct: 1127 EICLVHPLPGCLVRGA--QRLPSVMKRVESILLAVQLKHEI--GFP----IPAAKVLEAL 1178
Query: 1029 TTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAA 1088
T CQE FS ER E+LGDA+LK+ V R LF+ H EG+LTR R V+N L + A
Sbjct: 1179 TAASCQETFSYERAELLGDAYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAI 1238
Query: 1089 RNNLQVYIRDQPFDPCQFFALG------------------RRCPRICSKETERTIHSQYD 1130
+LQ YI+ F P ++ A G P+ E ER+ S +
Sbjct: 1239 SKSLQSYIQSDRFAPSRWAAPGVPPVFDEDLKDANLDNEAAEVPKANEHE-ERSTKSSGE 1297
Query: 1131 GRAPDDL----NAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ 1185
DD + E S + L KT+ADVVEAL+G + + G KAA F+ WI I
Sbjct: 1298 EEVLDDSTSLEDGEAEWDSSSYRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWINIP 1357
Query: 1186 VEF---EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG 1242
+++ EA+ C S + S+D LE+ +G++F + +L++A H S G
Sbjct: 1358 IDYDEAEANAARAGCSVPDSVM---NSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAG 1414
Query: 1243 -GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKF 1301
CYQRLEF+GDAVLD+LIT YL+ Y L PG+LTDLR+ VNN+ FA ++V SF+
Sbjct: 1415 VPCYQRLEFVGDAVLDHLITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLH 1474
Query: 1302 LIFDSNVLSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFN 1357
L S+ L I ++V + + + + PKVLGD++ES GAI LD+G
Sbjct: 1475 LRHGSSALEAQIKDFVKDIQSELDKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLA 1534
Query: 1358 LNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
+ VWK+ L+P++ L ++P+REL E C L++ + ++G E V G
Sbjct: 1535 ADEVWKVFERLLEPMVTPDTLPVHPVRELQERCQQQAEGLEYRASREGSIATVEVFVDG- 1593
Query: 1418 DKDVFISACATNLSRKEA 1435
V I CA N +K A
Sbjct: 1594 ---VQI-GCAQNTQKKMA 1607
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 520/1732 (30%), Positives = 777/1732 (44%), Gaps = 268/1732 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA+VI F+V +CG G S W++E + +VLVM QILL L H I
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQVLVMTAQILLNILRHSII 367
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQA 234
+ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q
Sbjct: 368 RMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-----INDTSSSYVTCS 289
+ I +LE LD+ V +++D ++LE V P V +Y +++T +
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 290 EQLAEIK----REQYISALS-------RKLHDHQSLRNTTKQLNRLHD--SMKFCLENLG 336
E+ A+ + Q++ A R+++ + N +H ++ + L LG
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELG 545
Query: 337 VCGALHASYILLSG---DET--------------------MRNELIEA------------ 361
A LS DE ++ EL+E
Sbjct: 546 QWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGK 605
Query: 362 -----------EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
EG DD + EV A + + + K+
Sbjct: 606 PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGA---------------AVADGKVTPKVQ 650
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSR 470
LI +L ++ + IVFV R+V A L + L L+ RC ++G N + M
Sbjct: 651 SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNS-QEMKS 709
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S
Sbjct: 710 SQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGS 769
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCSEERIY 578
+Y +V+ GN ++N E+ + +E ++RT S DA + +Y
Sbjct: 770 DYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT---VY 826
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPAN 633
KV+++GA +S V L+H YCS+LP D + +P+F + GG C + LP N
Sbjct: 827 KVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCN 886
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
AP + G SSM A++ CL A + LH++GA D LLP + + + E + +
Sbjct: 887 APFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEP 946
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPV----RLNFYFMQFI--------PDPADRIY 741
G E + V VL+ W S V +L +M + DP
Sbjct: 947 VPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMHNVRCVDFGSSKDPFLSEV 1006
Query: 742 REFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQA--------QQFQEMFLKV 793
EF + + L E + +DL++AR L G + ++F + +
Sbjct: 1007 SEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSI 1066
Query: 794 ILDRSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR---- 839
+LD S FVP+ + E + L+ I + D + R
Sbjct: 1067 VLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPD 1126
Query: 840 -------RCL---------------------SSPVFGTPGG----SVDRKS--LP----- 860
R L S P +G G V R S LP
Sbjct: 1127 VYLGTNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAF 1186
Query: 861 --------SHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS- 909
S G L + +G D+ +V A H + V +I ++ + + P K+
Sbjct: 1187 EKEVEEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGY 1246
Query: 910 ----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYF 963
+ +++ D+ YG+ L +QPL++ + + +NLL R + ES + + Y+
Sbjct: 1247 LGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYY 1306
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK+L+S P
Sbjct: 1307 VFLPPELCVVHPLSGSLIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSK 1358
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1359 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1418
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDL 1137
+ A LQ YI+ F P ++ A G P + ++T+ S +D D+
Sbjct: 1419 YQFALVKGLQSYIQADRFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDV 1476
Query: 1138 NAEVRCSKG--------HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
+ G + L KT+ADVVEAL+G + + G AA +KWIGI VE +
Sbjct: 1477 FEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDD 1536
Query: 1190 ASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRL 1248
+V + + S+D LE L ++F +GLL++A H S G CYQRL
Sbjct: 1537 PDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRL 1596
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV 1308
EF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+
Sbjct: 1597 EFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSA 1656
Query: 1309 LSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
L + I +V + T SS + PKVLGD+VES GAI LDSG + WK+
Sbjct: 1657 LEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKV 1716
Query: 1365 MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS 1424
L P++ L ++P+REL E C L++ + + G E VFI
Sbjct: 1717 FQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVE---------VFID 1767
Query: 1425 ACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVV 1484
+++ ++A + AA E + E IN
Sbjct: 1768 GVQVGVAQNPQKKMAQKLAARNALAA-----------------LKEKEIAESKEKHINNG 1810
Query: 1485 AADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
A ++ E + G+ + P R L ++C W P++ C K
Sbjct: 1811 NAGEDQ------GENENGNKKNGHQP----------FTRQTLNDICLRKNWPMPSYRCVK 1854
Query: 1545 EEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
E G +H K FTF V V ECIGEP K A + AA +L L +
Sbjct: 1855 EGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906
>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=AtDCL1; AltName:
Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
1; AltName: Full=Protein SUSPENSOR 1
gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1909
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 520/1732 (30%), Positives = 777/1732 (44%), Gaps = 268/1732 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA+VI F+V +CG G S W++E + +VLVM QILL L H I
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQVLVMTAQILLNILRHSII 367
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQA 234
+ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q
Sbjct: 368 RMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-----INDTSSSYVTCS 289
+ I +LE LD+ V +++D ++LE V P V +Y +++T +
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 290 EQLAEIK----REQYISALS-------RKLHDHQSLRNTTKQLNRLHD--SMKFCLENLG 336
E+ A+ + Q++ A R+++ + N +H ++ + L LG
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELG 545
Query: 337 VCGALHASYILLSG---DET--------------------MRNELIEA------------ 361
A LS DE ++ EL+E
Sbjct: 546 QWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGK 605
Query: 362 -----------EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
EG DD + EV A + + + K+
Sbjct: 606 PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGA---------------AVADGKVTPKVQ 650
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSR 470
LI +L ++ + IVFV R+V A L + L L+ RC ++G N + M
Sbjct: 651 SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNS-QEMKS 709
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S
Sbjct: 710 SQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGS 769
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCSEERIY 578
+Y +V+ GN ++N E+ + +E ++RT S DA + +Y
Sbjct: 770 DYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT---VY 826
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPAN 633
KV+++GA +S V L+H YCS+LP D + +P+F + GG C + LP N
Sbjct: 827 KVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCN 886
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
AP + G SSM A++ CL A + LH++GA D LLP + + + E + +
Sbjct: 887 APFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEP 946
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPV-------RLNFYFMQFI-----PDPADRIY 741
G E + V VL+ W S V L Y ++ + DP
Sbjct: 947 VPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEV 1006
Query: 742 REFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQA--------QQFQEMFLKV 793
EF + + L E + +DL++AR L G + ++F + +
Sbjct: 1007 SEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSI 1066
Query: 794 ILDRSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR---- 839
+LD S FVP+ + E + L+ I + D + R
Sbjct: 1067 VLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPD 1126
Query: 840 -------RCL---------------------SSPVFGTPGG----SVDRKS--LP----- 860
R L S P +G G V R S LP
Sbjct: 1127 VYLGTNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAF 1186
Query: 861 --------SHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS- 909
S G L + +G D+ +V A H + V +I ++ + + P K+
Sbjct: 1187 EKEVEEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGY 1246
Query: 910 ----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYF 963
+ +++ D+ YG+ L +QPL++ + + +NLL R + ES + + Y+
Sbjct: 1247 LGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYY 1306
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK+L+S P
Sbjct: 1307 VFLPPELCVVHPLSGSLIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSK 1358
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1359 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1418
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDL 1137
+ A LQ YI+ F P ++ A G P + ++T+ S +D D+
Sbjct: 1419 YQFALVKGLQSYIQADRFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDV 1476
Query: 1138 NAEVRCSKG--------HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
+ G + L KT+ADVVEAL+G + + G AA +KWIGI VE +
Sbjct: 1477 FEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDD 1536
Query: 1190 ASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRL 1248
+V + + S+D LE L ++F +GLL++A H S G CYQRL
Sbjct: 1537 PDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRL 1596
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV 1308
EF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+
Sbjct: 1597 EFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSA 1656
Query: 1309 LSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
L + I +V + T SS + PKVLGD+VES GAI LDSG + WK+
Sbjct: 1657 LEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKV 1716
Query: 1365 MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS 1424
L P++ L ++P+REL E C L++ + + G E VFI
Sbjct: 1717 FQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVE---------VFID 1767
Query: 1425 ACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVV 1484
+++ ++A + AA E + E IN
Sbjct: 1768 GVQVGVAQNPQKKMAQKLAARNALAA-----------------LKEKEIAESKEKHINNG 1810
Query: 1485 AADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
A ++ E + G+ + P R L ++C W P++ C K
Sbjct: 1811 NAGEDQ------GENENGNKKNGHQP----------FTRQTLNDICLRKNWPMPSYRCVK 1854
Query: 1545 EEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
E G +H K FTF V V ECIGEP K A + AA +L L +
Sbjct: 1855 EGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906
>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1910
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 520/1733 (30%), Positives = 777/1733 (44%), Gaps = 269/1733 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA+VI F+V +CG G S W++E + +VLVM QILL L H I
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQVLVMTAQILLNILRHSII 367
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQA 234
+ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q
Sbjct: 368 RMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-----INDTSSSYVTCS 289
+ I +LE LD+ V +++D ++LE V P V +Y +++T +
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 290 EQLAEIK----REQYISALS-------RKLHDHQSLRNTTKQLNRLHD--SMKFCLENLG 336
E+ A+ + Q++ A R+++ + N +H ++ + L LG
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELG 545
Query: 337 VCGALHASYILLSG---DET--------------------MRNELIEA------------ 361
A LS DE ++ EL+E
Sbjct: 546 QWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGK 605
Query: 362 -----------EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
EG DD + EV A + + + K+
Sbjct: 606 PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGA---------------AVADGKVTPKVQ 650
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSR 470
LI +L ++ + IVFV R+V A L + L L+ RC ++G N + M
Sbjct: 651 SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNS-QEMKS 709
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S
Sbjct: 710 SQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGS 769
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCSEERIY 578
+Y +V+ GN ++N E+ + +E ++RT S DA + +Y
Sbjct: 770 DYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT---VY 826
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPAN 633
KV+++GA +S V L+H YCS+LP D + +P+F + GG C + LP N
Sbjct: 827 KVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCN 886
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
AP + G SSM A++ CL A + LH++GA D LLP + + + E + +
Sbjct: 887 APFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEP 946
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPV-------RLNFYFMQFI-----PDPADRIY 741
G E + V VL+ W S V L Y ++ + DP
Sbjct: 947 VPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEV 1006
Query: 742 REFGLFVKSLLPGEAE-HLKVDLHLARGRSVMTKLVPSGIMQA--------QQFQEMFLK 792
EF + + L E + +DL++AR L G + ++F +
Sbjct: 1007 SEFAILFGNELDAEVVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMS 1066
Query: 793 VILDRSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR--- 839
++LD S FVP+ + E + L+ I + D + R
Sbjct: 1067 IVLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARP 1126
Query: 840 --------RCL---------------------SSPVFGTPGG----SVDRKS--LP---- 860
R L S P +G G V R S LP
Sbjct: 1127 DVYLGTNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDA 1186
Query: 861 ---------SHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS 909
S G L + +G D+ +V A H + V +I ++ + + P K+
Sbjct: 1187 FEKEVEEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEG 1246
Query: 910 -----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEY 962
+ +++ D+ YG+ L +QPL++ + + +NLL R + ES + + Y
Sbjct: 1247 YLGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTY 1306
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
+ LPPELC + + S G+ LPSIM R+E++L+A++LK+L+S P
Sbjct: 1307 YVFLPPELCVVHPLSGSLIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TS 1358
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N
Sbjct: 1359 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMV 1418
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDD 1136
L + A LQ YI+ F P ++ A G P + ++T+ S +D D
Sbjct: 1419 LYQFALVKGLQSYIQADRFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSD 1476
Query: 1137 LNAEVRCSKG--------HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
+ + G + L KT+ADVVEAL+G + + G AA +KWIGI VE
Sbjct: 1477 VFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVED 1536
Query: 1189 EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQR 1247
+ +V + + S+D LE L ++F +GLL++A H S G CYQR
Sbjct: 1537 DPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQR 1596
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+
Sbjct: 1597 LEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSS 1656
Query: 1308 VLSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWK 1363
L + I +V + T SS + PKVLGD+VES GAI LDSG + WK
Sbjct: 1657 ALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWK 1716
Query: 1364 IMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFI 1423
+ L P++ L ++P+REL E C L++ + + G E VFI
Sbjct: 1717 VFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVE---------VFI 1767
Query: 1424 SACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV 1483
+++ ++A + AA E + E IN
Sbjct: 1768 DGVQVGVAQNPQKKMAQKLAARNALAA-----------------LKEKEIAESKEKHINN 1810
Query: 1484 VAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCC 1543
A ++ E + G+ + P R L ++C W P++ C
Sbjct: 1811 GNAGEDQ------GENENGNKKNGHQP----------FTRQTLNDICLRKNWPMPSYRCV 1854
Query: 1544 KEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
KE G +H K FTF V V ECIGEP K A + AA +L L +
Sbjct: 1855 KEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907
>gi|297735235|emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 452/1399 (32%), Positives = 723/1399 (51%), Gaps = 104/1399 (7%)
Query: 91 LLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDW 149
+L+ AHL+RKP I +FL P V LV QQA+ ++ KV T+ G W
Sbjct: 1 MLLRYYAHLLRKPSPFIAVFLVPKVVLVPQQAEAVKMHTDLKVGTYWGDMGVDFWDAATW 60
Query: 150 EKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP 209
KE D++EVLVM P ILL L H F K+++I +LIFDECHHA+ K PYA IMK+FY
Sbjct: 61 RKEQDKHEVLVMTPAILLNGLRHSFFKLDMIKVLIFDECHHARGKD--PYACIMKEFYHE 118
Query: 210 DIM----KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV- 264
+ +PRIFGMTASP+ KG ++ + K++ LENL+++K+Y+ L FV
Sbjct: 119 QVRSNNSNLPRIFGMTASPIKTKGTTSTWSCGKNMIELENLMNSKIYTSVSEAVLAEFVP 178
Query: 265 -SSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNR 323
S+P + Y+ + S+ + + QL EI + +Y +L + + K++++
Sbjct: 179 FSTPKLTHYKDKDI---PSALFENVAHQL-EILKNKYEHSLESLNLMESTKESARKKISK 234
Query: 324 LHDSMKFCLENLGVCGALHASYILLSGD-ETMRNELIEAEGNTIDDSLCRFASQASEVFA 382
L + FCL +LG+ AL A+ D + ++ G I + + A + +
Sbjct: 235 LFSAFLFCLNDLGLWLALKAAEFSFCDDMDICCWGQLDLSGEEIIKNFNKDAYKVISTYL 294
Query: 383 AICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSY 442
R + DL + F + K++ L+G L +R ++++CIVFV R++TA L
Sbjct: 295 PSDRELSVGDDLEADA--ESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQK 352
Query: 443 ILQNLKFLA-SWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
+L L W ++ G + L+S SR +++E+FR G +N++V+T + EEGLD+Q
Sbjct: 353 LLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQ 412
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
+C LVIRFD TV SFIQSRGRARM S+Y +V SG+ + L ++ + M E
Sbjct: 413 SCNLVIRFDPSATVCSFIQSRGRARMQNSDYLLMVKSGDDKTLSRLRTYLDSGKVMREES 472
Query: 562 MDRTSSDAF----TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
+ S + +E Y V+S+ A ++ + LL+ YCS+LP D +F P P+
Sbjct: 473 LRNASLPCAPLKSSLDDEEFYWVESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSI 532
Query: 618 FDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQED 677
D+G C I P + PI + + + +++ K+ ACL+A ++LHK GAL D L+PQ
Sbjct: 533 NQDMG--TCTIYHPKSCPIQTV--SVRGNIKTLKQIACLEACKELHKAGALTDNLVPQ-- 586
Query: 678 NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPA 737
E+E ++ ++ Y+ E + E++ P++ Y + L+ + ++ P
Sbjct: 587 -IVEEEAIVAQDENMPYDDEQATYYPPELINPSLKDPVTPYHCYLIELDQKY-EYEVSPQ 644
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMF 790
+ L V+S L + ++ DL + RG ++ L ++ ++FQ
Sbjct: 645 GIV-----LAVRSELEYDVGNVNFDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITL 699
Query: 791 LKVILDRSEFNSEF--VPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKIIRRCLSSP 845
L+V++DR+ F LG D + YL+LP + + VDWK CL S
Sbjct: 700 LRVLIDRAIDKGVFDRYDLGNDQMVD------YLMLPSTNSREIPSIVDWK----CLGSV 749
Query: 846 VFGTPGGSVDRKSLPSHGP-LQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS 904
F S + P + +G+ ++NS+VY H FY +T I+ E NG S
Sbjct: 750 FFSHENAS---NHMGCFFPRMHTKSGFVCSCTLKNSIVYTPHTSQFYCITGILGELNGNS 806
Query: 905 --PYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEY 962
K+ ++ ++ +GI L+ + LL+ + +F ++N L ++ + EL
Sbjct: 807 FLSLKNGGLLTYKEYYRLRHGIELQFDGEKLLKGRRMFVVQNYL--QRCRQQKEKELSNT 864
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
+LPPELC + + S I S SL+PSIMHR+E+LL+A+ LK+ + ++ + ++
Sbjct: 865 TVELPPELCVIFMSPISISIIYSFSLIPSIMHRIESLLLAVNLKN-IHLNYCKQNDIPTF 923
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L+A+TT+ CQE F LE LE LGD+FLKYA + LF EG L+ ++ ++N++
Sbjct: 924 KVLEAITTKHCQEGFHLESLETLGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNAS 983
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L KL L +IR++ FDP ++ G + S G ++
Sbjct: 984 LCKLGCDRKLPGFIRNESFDPKKWIIAGDQS------------RSHVFGEELLSSTRKIY 1031
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
S+ L K IADVVEAL+GAF+ G AA F++W+GI V+F + + K
Sbjct: 1032 VSERRK-LKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDF-------VKVPYKR 1083
Query: 1203 FLP--LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDY 1258
P L ++++ LE +L + F LL++A H S+ + CYQRLEFLGDAVLDY
Sbjct: 1084 DFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1143
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE----TIN 1314
L+T +LY YP + PG LTDLRS VNN +A AV ++ ++ S L T+
Sbjct: 1144 LMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVG 1203
Query: 1315 NYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
N+ + ST + PKVLGD++ES GAIL+DS +N V++ + L+P++
Sbjct: 1204 NFDKLPV--ESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLIT 1261
Query: 1375 FSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK--FLAEAKVTG-KDKDVFISACATNLS 1431
++L+P REL ELC D++ + + GK E + G K K S
Sbjct: 1262 PETVKLHPARELGELCQKEHYDIKRVVVSQNGKASVTIEVEANGAKHKHTSTS------D 1315
Query: 1432 RKEAIRIASQQLFSKLKAA 1450
++ A ++AS+++ LK +
Sbjct: 1316 KRTATKLASKEVLKSLKES 1334
>gi|222625282|gb|EEE59414.1| hypothetical protein OsJ_11564 [Oryza sativa Japonica Group]
Length = 1371
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 449/1395 (32%), Positives = 698/1395 (50%), Gaps = 162/1395 (11%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLNPH-NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L +++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRL----NKKHIEALDRKLHG-SSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L ++L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
SFIQSRGRARM S+Y LV G ++ +T+++ F S +
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRG--------------------DVEAQTNAEKFLASGQ 528
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAP 635
+ + IS C L + +FNP P+F D GT C + LP ++P
Sbjct: 529 IMREESLRLGSIS-----------CQPLENTLYFNPLPRF-DIDKASGT-CTLHLPKSSP 575
Query: 636 IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSD---SD 692
+ + + S+ K+ CLKA ++LH +GAL D LLP+ D ++EP + +
Sbjct: 576 VQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP 633
Query: 693 SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF-----MQFIPDPADRIYREFGL- 746
SY P +W RL Y+ ++ P A L
Sbjct: 634 SY-------------FPEEFVDNWRSFS---RLGIYYCYKISLEGCPKTASPTDILLALK 677
Query: 747 ------FVKS--LLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL--D 796
F S LPG ++ V + + L ++ A++FQ L ++ D
Sbjct: 678 CDLGSDFTSSSFKLPGGQDNASVTMKYVG----IIHLNQEQVIIARRFQTTILSFLIGDD 733
Query: 797 RSE-------FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGT 849
E F+ VP+G YLLLP++ +DW ++ SSP++
Sbjct: 734 HLEVSNGIKYFHEMQVPIG----------VVYLLLPLV--SGRIDWCSMKFS-SSPIYEA 780
Query: 850 PGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGYSPYK 907
+ S LQ +G ++NS+V H FY+++ + + N P
Sbjct: 781 NNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSRLPQH 840
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP 967
D ++ D+ + +G+ L QPLL ++RN LHN E + Y +LP
Sbjct: 841 DGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHN-CYSKKEKEPGDRYSVELP 899
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PELC++ + S + S +PSIM R++ +L++++LK L + + +V +L+A
Sbjct: 900 PELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQ-FDVPVLKILEA 958
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
LTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L +LA
Sbjct: 959 LTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLA 1018
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
+NL YI + F+P + C ER + + AP+ + ++ + S
Sbjct: 1019 CSSNLVGYIHAEEFNPRDWII-------PCLDYDERG-NKKISFLAPNGMYSQRKMS--- 1067
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
+ K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K +
Sbjct: 1068 --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKISMKAE 1121
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLY 1265
+++ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T Y Y
Sbjct: 1122 EFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1181
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-PS 1324
S YP P LTDLRS VNN +A+ AV K ++ S+ L ++ Y+ T PS
Sbjct: 1182 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGPS 1241
Query: 1325 STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIR 1384
E G PKVLGD++ES GAI LDS + VW+ M L+P+ ++ +P++
Sbjct: 1242 YGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVK 1299
Query: 1385 ELLELCNSYDLDLQF 1399
L E C+ + +
Sbjct: 1300 GLQEFCDRRSFKITY 1314
>gi|251764794|sp|Q69LX2.2|DCL2B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:
Full=Dicer-like protein 2b; Short=OsDCL2b
Length = 1377
Score = 608 bits (1567), Expect = e-170, Method: Compositional matrix adjust.
Identities = 448/1396 (32%), Positives = 691/1396 (49%), Gaps = 158/1396 (11%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ Q N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLN-QHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L + ++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRLTK----KHIEALDRKLHG-SSLENAKQRISKLHRTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L +L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA----FT 571
SFIQSRGRARM S+Y LV G+ K F M E + S T
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSISCQPLENT 548
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E+ Y+V+S+ A + D GT C + LP
Sbjct: 549 LCEDTYYRVESTPA------------------------------FDIDKASGT-CTLHLP 577
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
++P+ + + S+ K+ CLKA ++LH +GAL D LLP+ D ++EP + +
Sbjct: 578 KSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENK 635
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF-----MQFIPDPADRIYREFGL 746
P +W RL Y+ ++ P A L
Sbjct: 636 IE----------QPSYFPEEFVDNWRSFS---RLGIYYCYKISLEGCPKTASPTDILLAL 682
Query: 747 -------FVKS--LLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL-- 795
F S LPG ++ V + + L ++ A++FQ L ++
Sbjct: 683 KCDLGSDFTSSSFKLPGGQDNASVTMKYVG----IIHLNQEQVIIARRFQTTILSFLIGD 738
Query: 796 DRSE-------FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFG 848
D E F+ VP+G YLLLP++ +DW ++ SSP++
Sbjct: 739 DHLEVSNGIKYFHEMQVPIG----------VVYLLLPLV--SGRIDWCSMKFS-SSPIYE 785
Query: 849 TPGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGYSPY 906
+ S LQ +G ++NS+V H FY+++ + + N P
Sbjct: 786 ANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSRLPQ 845
Query: 907 KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDL 966
D ++ D+ + +G+ L QPLL ++RN LHN + E + Y +L
Sbjct: 846 HDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYK-KEKEPGDRYSVEL 904
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
PPELC++ + S + S +PSIM R++ +L++++LK L + + +V +L+
Sbjct: 905 PPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQ-FDVPVLKILE 963
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L +L
Sbjct: 964 ALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQL 1023
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
A +NL YI + F+P + C ER + + AP+ + ++ + S
Sbjct: 1024 ACSSNLVGYIHAEEFNPRDWII-------PCLDYDERG-NKKISFLAPNGMYSQRKMS-- 1073
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
+ K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K +
Sbjct: 1074 ---IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKISMKA 1126
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYL 1264
+D+ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T Y
Sbjct: 1127 EEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYY 1186
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-P 1323
YS YP P LTDLRS VNN +A+ AV K ++ S+ L ++ Y+ T P
Sbjct: 1187 YSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGP 1246
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
S E G PKVLGD++ES GAI LDS + VW+ M L+P+ ++ +P+
Sbjct: 1247 SYGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPV 1304
Query: 1384 RELLELCNSYDLDLQF 1399
+ L E C+ + +
Sbjct: 1305 KGLQEFCDRRSFKITY 1320
>gi|379987678|gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 608 bits (1567), Expect = e-170, Method: Compositional matrix adjust.
Identities = 458/1409 (32%), Positives = 730/1409 (51%), Gaps = 130/1409 (9%)
Query: 42 AESSVGA-QKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
AE +V Q+ D AR YQLE + A++ N IVYL TG GKT IA++L+ A+L+
Sbjct: 4 AEVTVSENQQLCPDSLPFARSYQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYAYLL 63
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEV 158
RKP I +FL PTV LV QQ + KV + G G + W+K++ +EV
Sbjct: 64 RKPSPYIAVFLVPTVVLVAQQGDALIMHTDLKVGKYWGEMGVDYWDA-ATWQKQVVDHEV 122
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KV 214
LVM P ILL L H F+K+E+I +LIFDECH+A+ K HPYA IMK+FY + ++
Sbjct: 123 LVMTPAILLAALRHSFLKIEMIKVLIFDECHNARGK--HPYACIMKEFYHRQLTLESAQL 180
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVY 272
PRIFGMTASP+ KG+S + K I LENL+ +KVY+ L ++ S+P +++Y
Sbjct: 181 PRIFGMTASPIKTKGSSVEFTW-KMIRDLENLMHSKVYTCVSEFCLAKYIPFSTPKLKIY 239
Query: 273 QYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL 332
++ ++ + +V+ L +K ++Y ++S+ S + K+L++L+ S FCL
Sbjct: 240 RH---VDIPCTLFVSLVSDLIRLK-DKYEDSISKSSLSDLSAGSAXKRLSKLYSSFIFCL 295
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIA 391
LGV A A+ LS +ET + E + + R F+ AS+VF+A
Sbjct: 296 SELGVWLAFKAAE-FLSSEET--DFFSWGELDVCAQRIVRNFSLGASKVFSAHXPSGSHW 352
Query: 392 SDLSCIEV-LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL-KF 449
S I + + + K+ LI L +R + ++CI+FV RI+TA L + L
Sbjct: 353 SLGGDIHANVDAGYLTSKVNSLIESLLEYRDLKDLRCIIFVERIITAIVLRSLXNELLPD 412
Query: 450 LASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
L+ W+ + G ++ L+S SRN I+E+FR G +N++VAT + EEGLD+Q+C LVIRF
Sbjct: 413 LSGWKTEYTAGHSSLLQSQSRNVQNKIVEEFRKGVVNIIVATSILEEGLDVQSCNLVIRF 472
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA 569
D TV SFIQSRGRARM S + +V SG+ L ++N+ + + M +E + S
Sbjct: 473 DPSATVCSFIQSRGRARMQNSHFILMVGSGDASTLTRMQNYMQSGEIMRQESLRHAS--- 529
Query: 570 FTCS-------EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
CS +E YKV+++GA ++ VSLL+ YCS+LP D ++ P P+ +
Sbjct: 530 IPCSPLDDELHDEPYYKVETTGAVVTLSSSVSLLYFYCSRLPSDGYYKPSPRCAIEKE-- 587
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATED 682
C + LP N P+ +++ + + + K+ ACL+A ++LH+ GAL D L+P + E+
Sbjct: 588 TETCTLYLPKNCPLQKVISV-KGNTKILKQLACLEACKELHREGALTDNLVP---DIVEE 643
Query: 683 EPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYR 742
E ++ Y E + E++ Y V L + Y+
Sbjct: 644 EAIIKELGCQIYTDEELKYFPPELVSHCANDTEAVYYCYEVDLQ--------HDSYSSYQ 695
Query: 743 EFGLF--VKSLLPGEAEHLKVDLHLARGR-------SVMTKLVPSGIMQAQQFQEMFLKV 793
G+ V++ L + E L DL + +G S + +L +++ Q+FQ ++
Sbjct: 696 LCGIILAVRTRLKFDDERLTFDLDVDKGSLLVQVNYSGVVRLTSEEVLRCQRFQVSLFRI 755
Query: 794 ILDR------SEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS--VDWKIIRRCLSSP 845
+LDR + +P+G S+ + YLLLP + + ++W+ C++S
Sbjct: 756 LLDRDLSKLEDALAAVQLPVG-------SAVSDYLLLPSLGSTQNPQINWE----CVNSV 804
Query: 846 VFGTPGGSVDRKSL---PSHG---PLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-- 897
+F P + K + + G + G +ENSLV H + Y +T +
Sbjct: 805 LF--PSQVLGDKHIDCCSTQGRKRSVNTKTGVVCSCMLENSLVCTPHNGYVYCITGFLDN 862
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH---NRKLEDS 954
+ N + +S +++++ + I+L + LLR K +F++ N L ++K +DS
Sbjct: 863 LDCNSLLEQRTGESITYIEYYKKRHRINLCFDGEQLLRGKHIFKVHNYLQRCRSQKAKDS 922
Query: 955 ESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFP 1014
+E LPPELC + + S + S LPS+MHR+E+L++A LK + S
Sbjct: 923 TESSVE-----LPPELCSIIMSPVSISTLFTYSYLPSVMHRVESLIMASNLKRMHSYQCT 977
Query: 1015 EGAEVSAEM-LLKALTTEKCQERF---SLERLEILGDAFLK-YAVGRHLFLLHDTVDEGE 1069
+ + + K L + F L LE L L+ Y+ R + + H EG
Sbjct: 978 QKHFLFQPLRFWKQLQQRNASKSFIWNHLRHLETLFSNMLRVYSCSRLMKIHH----EGL 1033
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY 1129
LT +++ ++N+ L KL + +IR +PFD + G +SQ
Sbjct: 1034 LTVKKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGD--------------NSQV 1079
Query: 1130 DGRAPDDLNAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
+ L V+ S+G + K +ADVVEAL+GAF+ G AA +F+KW+G+ ++F
Sbjct: 1080 QNFDEELLMPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGVDIDF 1139
Query: 1189 EASQVTNICISSKSFLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGC 1244
+ + P++A +++ LE LL ++F LL++A H S+ + C
Sbjct: 1140 -------VDAPTPRHFPMNAEKLVNVRYLESLLDYKFHDPSLLVEALTHGSYMLPEIPRC 1192
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGDAVLDY +T++LY YP L PG +TDLRS VNN+ +A AV +K ++
Sbjct: 1193 YQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILH 1252
Query: 1305 DSNVLSETINNYVDYM--ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
S L I N V + P+ST + PKVLGD++ES GAI +DSGFN + V+
Sbjct: 1253 ASQDLQRQIVNTVLNFEKLDPASTFGWESETTFPKVLGDVIESLAGAIFVDSGFNKDVVF 1312
Query: 1363 KIMLSFLDPILKFSNLQLNPIRELLELCN 1391
+ + + L+P++ ++L+P+REL ELC+
Sbjct: 1313 QSVRTLLEPLITPDTVKLHPVRELSELCD 1341
>gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa Japonica Group]
gi|51091635|dbj|BAD36404.1| CAF protein-like [Oryza sativa Japonica Group]
Length = 1375
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 447/1396 (32%), Positives = 690/1396 (49%), Gaps = 160/1396 (11%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ Q N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLN-QHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L + ++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRLTK----KHIEALDRKLHG-SSLENAKQRISKLHRTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L +L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA----FT 571
SFIQSRGRARM S+Y LV G+ K F M E + S T
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSISCQPLENT 548
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E+ Y+V+S+ + D GT C + LP
Sbjct: 549 LCEDTYYRVEST--------------------------------FDIDKASGT-CTLHLP 575
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
++P+ + + S+ K+ CLKA ++LH +GAL D LLP+ D ++EP + +
Sbjct: 576 KSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENK 633
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF-----MQFIPDPADRIYREFGL 746
P +W RL Y+ ++ P A L
Sbjct: 634 IE----------QPSYFPEEFVDNWRSFS---RLGIYYCYKISLEGCPKTASPTDILLAL 680
Query: 747 -------FVKS--LLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL-- 795
F S LPG ++ V + + L ++ A++FQ L ++
Sbjct: 681 KCDLGSDFTSSSFKLPGGQDNASVTMKYVG----IIHLNQEQVIIARRFQTTILSFLIGD 736
Query: 796 DRSE-------FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFG 848
D E F+ VP+G YLLLP++ +DW ++ SSP++
Sbjct: 737 DHLEVSNGIKYFHEMQVPIG----------VVYLLLPLV--SGRIDWCSMKFS-SSPIYE 783
Query: 849 TPGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGYSPY 906
+ S LQ +G ++NS+V H FY+++ + + N P
Sbjct: 784 ANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSRLPQ 843
Query: 907 KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDL 966
D ++ D+ + +G+ L QPLL ++RN LHN + E + Y +L
Sbjct: 844 HDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYK-KEKEPGDRYSVEL 902
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
PPELC++ + S + S +PSIM R++ +L++++LK L + + +V +L+
Sbjct: 903 PPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQ-FDVPVLKILE 961
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L +L
Sbjct: 962 ALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQL 1021
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
A +NL YI + F+P + C ER + + AP+ + ++ + S
Sbjct: 1022 ACSSNLVGYIHAEEFNPRDWII-------PCLDYDERG-NKKISFLAPNGMYSQRKMS-- 1071
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
+ K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K +
Sbjct: 1072 ---IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKISMKA 1124
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYL 1264
+D+ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T Y
Sbjct: 1125 EEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYY 1184
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-P 1323
YS YP P LTDLRS VNN +A+ AV K ++ S+ L ++ Y+ T P
Sbjct: 1185 YSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGP 1244
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
S E G PKVLGD++ES GAI LDS + VW+ M L+P+ ++ +P+
Sbjct: 1245 SYGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPV 1302
Query: 1384 RELLELCNSYDLDLQF 1399
+ L E C+ + +
Sbjct: 1303 KGLQEFCDRRSFKITY 1318
>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
Length = 1492
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 498/1636 (30%), Positives = 776/1636 (47%), Gaps = 245/1636 (14%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI-RKPQKSICIFLAPTVALVQQ 120
YQ ++ + A++ N I L TG GKT IAV+LI ++ + K + +FLAPTV LV Q
Sbjct: 1 YQSKVFEVAVKRNTIAVLETGAGKTMIAVMLIKQIGQAVFYSGVKRLILFLAPTVHLVNQ 60
Query: 121 QAKVIEESIGFKVRTFCGGSK----RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
A I+ F+V + G LKS WEKEID+++VLVM PQILL L F+
Sbjct: 61 -ACFIKSQTNFRVGEYYGAKGIDEWSLKS---WEKEIDEHDVLVMTPQILLDALRKAFLN 116
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+++++LLI DECH + NHPY KIMK
Sbjct: 117 LKMVSLLILDECHRST--GNHPYKKIMK-------------------------------- 142
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVINDTSSSYVTCSEQLAE 294
+Y++ED ++ +V S + R Y + SYV +++ E
Sbjct: 143 --------------IYTIEDRAEVHVYVPSAKELCRFY------DKAWCSYVELKDKI-E 181
Query: 295 IKREQYISALSRKLHDHQS--------LRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
++ +++ QS L+ T KQL++ H + CLE+LG+ A A +
Sbjct: 182 ASWSKFDASMLALQGSTQSCYKDMDDKLKATRKQLSKDHAKILNCLEDLGLICAYEAIKV 241
Query: 347 LL--SGDETMRNELIEAEGNTIDDSL-CR-FASQASEVFA-AICRRDGIASD--LSCIEV 399
L +G+ T +L + + SL CR F + ++ D + D C
Sbjct: 242 CLENAGNPTGECKLYQ------EISLQCRYFLEDVLHIIGESLLHGDNFSLDHGFDCSAA 295
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
L + S KL L+ + +F + + C++FV RI+TA+ + ++ ++ LA + +L
Sbjct: 296 LGFGYISPKLHELLQLFLSFGEAREVLCLIFVERIITAKVVERFMKKVEVLAHFTVSYLT 355
Query: 460 GVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
G NA +++ LE FRSG++NLL AT V EEG+ + C VIRFDLP+TV S++
Sbjct: 356 GTNASADALAPKMQMETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYV 415
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS--DAFTCSEE-- 575
QSRGRAR S + +++ GN ++ D + + E M ++R + + C+ E
Sbjct: 416 QSRGRARQNNSHFITMLERGNTKQRDQLFEIIRSEWSMTDTAINRDPNVWNLKACASEAA 475
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAP 635
+ Y VD +GA ++A LP NA
Sbjct: 476 KAYVVDVTGASVTADSS-------------------------------------LPPNAA 498
Query: 636 IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYE 695
+VG + + AK+ CL+A + LH++GAL+D+LLP + +E ++ S + +
Sbjct: 499 FQTLVGPTCRNQQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSEI-AVVKSKSTSAGA 557
Query: 696 GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGE 755
G R ELH L SW + + Y F +IY F L ++S L +
Sbjct: 558 GTTKRKELHGTACIHALSGSWGEKLDGATFHAYKFDFSCSIVSQIYSGFILLIESKLDDD 617
Query: 756 AEHLKVDLHLARGRSVMTKLVPSGIM--------QAQQFQEMFLKVILDR----SEFNSE 803
++++DL+L + V + + G++ +A++FQE F + + S+ + E
Sbjct: 618 VGNIELDLYLV-AKIVKSSISSCGVVHLDAAQMTKAKRFQEFFFNGLFGKLFTGSKSSRE 676
Query: 804 FVPLGKDDYCESSSSTFYLLLPVIFHKNS------VDWKIIRRCLSSPVF---------- 847
F+ L K+ S S YLLLP+ S +DWK I C S +
Sbjct: 677 FL-LQKETTLLWSPSNMYLLLPLEPWSISSNDWCKIDWKGIEACSSVVEYLKNSFLAARS 735
Query: 848 ----GTP-GGSVDRKSLPSHGPLQLH--NGWSSESDVENSLVYATHKKWFYLVTNIVFEK 900
G P +V ++ +G +H N + ++++ +V A H Y + +V +
Sbjct: 736 YSGGGNPLPDNVQSSTIECNGTNLIHFANALVNVENIKDMVVLAIHTGRIYSIVKVVNDS 795
Query: 901 NGYSPYKD-----SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLE--- 952
+ S ++ ++ S++ ++ YGI L HP QPLLR K N L N E
Sbjct: 796 SAESAFEGNADNVTEFSTYTEYFNKRYGIVLMHPGQPLLRLKQSHNPHNHLVNFNDEGLL 855
Query: 953 -----DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH 1007
D ++ +PPEL L I + S+ L+PS+MHRLE L++A +L+
Sbjct: 856 VCDSKDGMVGRKQQQHVHMPPEL--LIKIDVPISVVKSIYLMPSLMHRLECLMLASQLRQ 913
Query: 1008 LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDE 1067
+ P + + ++L+A+TT +C E FS+ERLE+LGD+ LKYAV HLFL + E
Sbjct: 914 EIDCHAP-NFYIPSSLILEAITTLRCCESFSMERLELLGDSVLKYAVSCHLFLKYPNKHE 972
Query: 1068 GELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR---RCPRICSKETERT 1124
G+L+ RS AV NS L KL +Q YI D FDP ++ A G+ R P C + T
Sbjct: 973 GQLSSWRSGAVCNSTLHKLGTDCKVQGYILDSAFDPRRWAAPGQKSVRTPAPCKCGVD-T 1031
Query: 1125 IHSQYDGRAPDDLNAEVR----CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLK 1180
+ D + + +A V+ C GH W+ KTI+D VE+++GA+ G AA +K
Sbjct: 1032 LEVPLDRKFQTE-SAIVKVGKPCDSGHRWMGSKTISDCVESVIGAYYVSGGLIAAIHVMK 1090
Query: 1181 WIGIQVEFEASQVTNICISS--KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF 1238
W GI E + S ++ S+ +S++P ++ +LE LG+ F + +L +A H S
Sbjct: 1091 WFGINAELDPSLISEAITSASLRSYIPKED--EIKSLESKLGYTFGVKFVLQEAMTHASI 1148
Query: 1239 NRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
G CYQRLEFLGD+VLD LIT +LY + + PG+LTDLRS VNN FA VAV Q
Sbjct: 1149 QEQGVTYCYQRLEFLGDSVLDLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQ 1208
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGF 1356
+ Y L+ S +L I YV+ S E +G + PK LGDL+ES GA+L+D+ F
Sbjct: 1209 NLYTHLLHCSTLLQSQITEYVN------SFHESDQGTKAPKALGDLIESIAGALLIDTKF 1262
Query: 1357 NLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTG 1416
NL+ VW+I L PI+ L+L P+REL+ELC+S + ++ KK + A++
Sbjct: 1263 NLDGVWRIFKPLLSPIVTPEKLELPPLRELVELCDSIGVFVKEKCTKKAE--MVHAQLWV 1320
Query: 1417 KDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGY 1476
+ + +S +RK A A+ L KL+ + L +S
Sbjct: 1321 QLDNELLSGEGYEKNRKAAKGKAASCLLKKLQVCNSGNCNHAFFCFLMNS---------- 1370
Query: 1477 DETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWK 1536
N+ E L S P I S + GG R+ LY+LC W
Sbjct: 1371 --------IVPSNIVEYLAKSPPFAV----IESINKKKGG-----PRTSLYDLCKKVQWT 1413
Query: 1537 PPTFDCCKEEGLSHLKL------------FTFRVIVEIEAPEKIIECIGEPQAKKKGAAE 1584
PTFD + + + ++ + ++I+ I + ++EC GE A KK + +
Sbjct: 1414 MPTFDTTETKSRTAIEFGEGPDKRTGFNSYVSKIIMNIPS-YGVVECAGEASADKKTSYD 1472
Query: 1585 HAAEGMLWCLEREGYL 1600
AA ML LE+ G L
Sbjct: 1473 SAALAMLNELEKRGQL 1488
>gi|145331748|ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640404|gb|AEE73925.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1374
Score = 603 bits (1556), Expect = e-169, Method: Compositional matrix adjust.
Identities = 438/1380 (31%), Positives = 714/1380 (51%), Gaps = 132/1380 (9%)
Query: 120 QQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQA+ ++ KV + G W++E+D+YEVLVM P ILL L H F+ +
Sbjct: 71 QQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHSFLSLS 130
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKGASAQA 234
+I +LI DECHHA K HPYA IM++FY ++ VPRIFGMTAS V KG + +
Sbjct: 131 MIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKGENLDS 188
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYVTCSEQL 292
K I+ LE L+++KVY+ E+ L FV S+P + YQ+ + + +S V E+L
Sbjct: 189 YW-KKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEKLERL 247
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
IK + L + ++ + K+L R+ ++ +CL++LG+ A A+ L
Sbjct: 248 T-IKHRLSLGTLDL---NSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL---SA 300
Query: 353 TMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIEVLKEP-FFSKKLL 410
+ + + E N +L + F S AS+ F A + G+ ++ I E + K +
Sbjct: 301 SQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQ-GLNWSVANINGNAEAGLLTLKTV 359
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLVGVNAGLKSMS 469
LI L + ++++CI+FV+R++TA L +L L +W+ ++ G N+GL++ +
Sbjct: 360 CLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQT 419
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFIQSRGRARM
Sbjct: 420 RKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQN 479
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------SEERIYKVDSS 583
S+Y +V+SG+ + + RM E +D + C S+E +++V+S+
Sbjct: 480 SDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHS---LVPCPPLPDDSDEPLFRVEST 536
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTP 643
GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP + P+ ++
Sbjct: 537 GATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPVKEV--KA 592
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSSDSDSYEGEGS 699
+++ + K+ CLKA LHK+GAL+D+L+P E + + E + ++++ Y
Sbjct: 593 EANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCY----- 647
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLPGEAEH 758
P ++ Q +Q +FY ++ P+ P + + L + +L + +
Sbjct: 648 -------FPPELVSQ--FSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGN 698
Query: 759 LKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDD 811
L RG +T L ++ ++FQ +V+LD S N +
Sbjct: 699 TSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVEN--LMEALNGL 756
Query: 812 YCESSSSTFYLLLPVIF-HKNS-VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
+ + YLL+P H+ S +DW++IR +L SH L+ H
Sbjct: 757 HLRDGVALDYLLVPSTHSHETSLIDWEVIRSV----------------NLTSHEVLEKHE 800
Query: 870 GWSSESD---------------VENSLVYATHKKWFYLVTNIVFEKNGYSPY--KDSDSS 912
S+ V+N+LVY H + Y ++ NG S ++S
Sbjct: 801 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 860
Query: 913 SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+++++ +GI L +PLL + +F L + LH K + + H+ E F +LPPELC
Sbjct: 861 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDRE--FVELPPELCH 918
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
+ + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A+TT+K
Sbjct: 919 VILSPISVDMIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEAITTKK 973
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
C+++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L + + L
Sbjct: 974 CEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKL 1033
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
Q +IRD+ F+P + G+ +S + P+ N V + L +
Sbjct: 1034 QGFIRDECFEPKGWMVPGQ----------SSAAYSLVNDTLPESRNIYVASRRN---LKR 1080
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
K++ADVVE+L+GA++ + G AA F+ W+GI+V+F ++ I S + +++
Sbjct: 1081 KSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTK-----IQRDSPIQAEKLVNV 1135
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY YP
Sbjct: 1136 GYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPC 1195
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS--STRE 1328
L PG LTD+RS VNN+ +A VAV + +K +++ S+ L + I+ V S ST
Sbjct: 1196 LSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFG 1255
Query: 1329 VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLE 1388
+ PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+REL E
Sbjct: 1256 WESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTE 1315
Query: 1389 LCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
LC + +L K F E K K++ + A +K A ++A +++ + LK
Sbjct: 1316 LCQKWQFELS--KAKDFDSFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1369
>gi|242033791|ref|XP_002464290.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
gi|241918144|gb|EER91288.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
Length = 1385
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 468/1472 (31%), Positives = 717/1472 (48%), Gaps = 183/1472 (12%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK-PQKSICIFLA 112
DP+ AR YQLE ++A+ N +V+L TG GKT IAVLL+ A+ IR P +FL
Sbjct: 11 DPQTQARWYQLEALERALAGNTLVFLETGAGKTLIAVLLLRRFANRIRSSPPPCFAVFLV 70
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLY 171
PTV LV QQA+V+ V F G + D W +D EVLVM PQILL L
Sbjct: 71 PTVVLVSQQARVVRAHTDLTVAEFFGEMGVDFWNADKWRDMVDGAEVLVMTPQILLDNLR 130
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
H F ++ I LLIFDECHHA N PYA I K+FY P + +PRIFGMTAS +
Sbjct: 131 HSFFRLRDIPLLIFDECHHAT--GNSPYACIFKEFYHPQLNSRPSDPIPRIFGMTASLIN 188
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVI--NDTSSS 284
K A+ I+ LENL++AKVY+V +L ++ R+ +Y I ++ S
Sbjct: 189 SKDL-ARDKYSMKISELENLMNAKVYTVASESELLQYIPFATTRIIEYDDYIVKSELYSH 247
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS 344
+ C ++L +++ L KLH L N K++ +L+ +C+ +LGV A A+
Sbjct: 248 TIRCLDKL----EAKHLEILKGKLHG-SYLENAEKRIKKLNAMFLYCISDLGVWLAAKAA 302
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFA--------SQASEVFAAICRRD---GIASD 393
IL S E+ + G +DD + F ++ SE+ + +R I D
Sbjct: 303 EILQSNKES----CVSFWGEKLDDEVEGFIRNYIGDVNNELSEIILKMTKRGLQRHIGED 358
Query: 394 LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW 453
L++ K+ LI L +R Q ++CIVFV R++T+ L +L + ++ W
Sbjct: 359 FDAD--LQDGLLKSKVYFLIKSLLEYRHVQDLRCIVFVKRVITSIVLEALLSTINQMSGW 416
Query: 454 RCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
++ G N GL+ SRN I++ FRSG+++L++AT++ EEGLD+ +C L+IRFD
Sbjct: 417 SVRYMAGKNFGLQYQSRNTHVEIVDSFRSGKVHLIIATQILEEGLDVPSCNLIIRFD--- 473
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAF--- 570
A+ + + F D G+ L + F E ++ RE R S +
Sbjct: 474 QAATNVDGGCLFDGVRDTSVFCFDGGDANALSKTEEF-LESGQIMREESQRLESTFYQPL 532
Query: 571 --TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDE--------------------- 607
T E Y V S+GA ++ V L++ +CSKLP DE
Sbjct: 533 PNTLCNEEFYGVQSTGAIVTLNSSVQLIYFFCSKLPSDESVFFLRLDNVFFWFIQQNISW 592
Query: 608 FFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
+FNP P+F LG C + LP ++P+ I + S+ K+ CL A +LH +GA
Sbjct: 593 YFNPLPRFNIDKALG--TCTLHLPMSSPVQTIYAEGEISI--IKRVVCLNACRELHAVGA 648
Query: 668 LNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS-----QYP 722
L DYLLP+ EDEP + D Y+ E P L +W Y
Sbjct: 649 LTDYLLPESSVPCEDEPDIV---VDKYKEEQPD------YFPEQLMDNWLSFCHRGLYYC 699
Query: 723 VRLNFYFMQFIPDPA------------DRIYREFGLF-VKSLLPGEAEHLKVDLHLARGR 769
+++ PA D I F L+ V+ L ++ V +HL + +
Sbjct: 700 YKISLEGCSETTTPAEIVLAVKCDLGSDFISTTFKLWGVQDYLSFTIRYVGV-IHLNQEQ 758
Query: 770 SVMTKLVPSGIMQAQQFQEMFLKVIL--DRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI 827
++ A++FQ L +++ D SE + L + + SS YLLLPV+
Sbjct: 759 ----------VIVARRFQTRILSLLISKDLSEDGNSIKSLLE---MQVSSGAVYLLLPVV 805
Query: 828 FHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHK 887
K +DW I+ S T S S G LQ G ++NS+V H
Sbjct: 806 SGK--IDWCSIKFSSSEMHEDTIMDSRHSHSCKDTGLLQTKGGPFCPCMLQNSIVSTPHN 863
Query: 888 KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH 947
Y V+ ++ + N SP ++S S+ H S+G+ LK QPLLRA L ++RN+LH
Sbjct: 864 GMLYAVSGLLLDLNANSPMRES-VLSYKTHFKESHGLDLKCEDQPLLRASKLVKVRNILH 922
Query: 948 NRKL-EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
R ++ ES + E LPPELC + + S + + +PSIM+R++ +L+++ LK
Sbjct: 923 ERNYKKEKESTNVFE----LPPELCIVVMAPVSANTLRCFTFIPSIMYRIQCMLLSVNLK 978
Query: 1007 HLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK-YAVGRHLFLLHDTV 1065
L S + ++ A +L+ALT +KC+E FS E LE LGD+FLK +A
Sbjct: 979 TQLGPSMKQ-FDIPALKVLEALTAKKCKEEFSQESLETLGDSFLKAWAFA---------- 1027
Query: 1066 DEGELTRRRSNAVNNSNLLKLAARNN-LQVYIRDQPFDPCQFFALGRRCPRICSKETERT 1124
AV N +L L R++ + YIR + F+P + G
Sbjct: 1028 -----------AVVNCGILFLLWRSDQAKGYIRSETFNPETWIIPG-------------- 1062
Query: 1125 IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
+D C + L K IAD VEAL+GA++ +G +AA FLK +G+
Sbjct: 1063 --------VGND-----SCGRSLRKLKSKRIADSVEALIGAYLSAAGEQAAYLFLKSLGM 1109
Query: 1185 QVEFEASQVT-NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG- 1242
+EF V I I++++F +++ +LE++L + F LLL+A H S+ G
Sbjct: 1110 DIEFHKMPVERKITINAENF------INLRSLELMLDYNFSDPSLLLEALTHGSYQIAGT 1163
Query: 1243 -GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKF 1301
CYQRLEFLGDAVLD++ T Y Y YP+ P LTDLRS VNN +A+ AV +K
Sbjct: 1164 TACYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKH 1223
Query: 1302 LIFDSNVLSETINNYVD-YMITPSSTREVKEGPRC-PKVLGDLVESSLGAILLDSGFNLN 1359
++ S+ L + + +Y+D + + S E C PKVLGD++ES GAI +D+ +
Sbjct: 1224 ILHSSSALHKKMADYLDKFEQSFSGPSHGWEAGICLPKVLGDVIESIAGAIYIDTKNDKK 1283
Query: 1360 TVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDK 1419
VW+ M L+P+ L+++P++EL E C+ +++ ++ + V + K
Sbjct: 1284 VVWRKMKRLLEPLATPDTLEIDPVKELHEFCDPKTCSIKYTVAREDR--VTSVAVEVQTK 1341
Query: 1420 DVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
A T L++++A ++A++ + +KAA
Sbjct: 1342 GTTYKATRTGLTKRDAKKLAAKSVLKDMKAAN 1373
>gi|94450856|gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
Length = 1374
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 437/1380 (31%), Positives = 712/1380 (51%), Gaps = 132/1380 (9%)
Query: 120 QQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQA+ ++ KV + G W++E+D+YEVLVM P ILL L H F+ +
Sbjct: 71 QQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHSFLSLS 130
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKGASAQA 234
+I +LI DECHHA K HPYA IM++FY ++ VPRIFGMTAS V KG + +
Sbjct: 131 MIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKGENLDS 188
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYVTCSEQL 292
K I+ LE L+++KVY+ E+ L FV S+P + YQ+ + + +S V E+L
Sbjct: 189 YW-KKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEKLERL 247
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
IK + L + ++ + K+L R+ ++ +CL++LG+ A A+ L
Sbjct: 248 T-IKHRLSLGTLDL---NSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL---SA 300
Query: 353 TMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIEVLKEP-FFSKKLL 410
+ + + E N +L + F S AS+ F A + G+ ++ I E + K +
Sbjct: 301 SQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQ-GLNWSVANINGNAEAGLLTLKTV 359
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLVGVNAGLKSMS 469
LI L + ++++CI+FV+R++TA L +L L +W+ ++ G N+GL++ +
Sbjct: 360 CLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQT 419
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFIQSRGRARM
Sbjct: 420 RKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQN 479
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------SEERIYKVDSS 583
S+Y +V+SG+ + RM E +D + C S+E +++V+S+
Sbjct: 480 SDYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHS---LVPCPPLPDDSDEPLFRVEST 536
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTP 643
GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP + P+ ++
Sbjct: 537 GATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPVKEV--KA 592
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSSDSDSYEGEGS 699
+++ + K+ CLKA LHK+GAL+D+L+P E + + E + ++++ Y
Sbjct: 593 EANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCY----- 647
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLPGEAEH 758
P ++ Q +Q +FY ++ P+ P + + L + +L + +
Sbjct: 648 -------FPPELVSQ--FSAQPETTYHFYLIRMKPNSPRNLHLNDVLLGTRVVLEDDIGN 698
Query: 759 LKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDD 811
L RG +T L ++ ++FQ +V+LD S N +
Sbjct: 699 TSFRLEDHRGTIAVTLSYVGAFHLTREEVLFCRRFQITLFRVLLDHSVEN--LMEALNGL 756
Query: 812 YCESSSSTFYLLLPVIF-HKNS-VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
+ + YLL+P H+ S +DW++IR +L SH L+ H
Sbjct: 757 HLRDGVALDYLLVPSTHSHETSLIDWEVIRSV----------------NLTSHEVLEKHE 800
Query: 870 GWSSESD---------------VENSLVYATHKKWFYLVTNIVFEKNGYSPY--KDSDSS 912
S+ V+N+LVY H + Y ++ NG S ++S
Sbjct: 801 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 860
Query: 913 SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+++++ +GI L +PLL + +F L + LH K + + H+ E F +LPPELC
Sbjct: 861 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDRE--FVELPPELCH 918
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
+ + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A+TT+K
Sbjct: 919 VILSPISVDMIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEAITTKK 973
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
C+++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L + + L
Sbjct: 974 CEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKL 1033
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
Q +IRD+ F+P + G+ +S + P+ N V + L +
Sbjct: 1034 QGFIRDECFEPKGWMVPGQ----------SSAAYSLVNDTLPESRNIYVASRRN---LKR 1080
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
K++ADVVE+L+GA++ + G AA F+ W+GI+V+ ++ I S + +++
Sbjct: 1081 KSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTK-----IQRDSPIQAEKLVNV 1135
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY YP
Sbjct: 1136 GYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPC 1195
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS--STRE 1328
L PG LTD+RS VNN+ +A VAV + +K +++ S+ L + I+ V S ST
Sbjct: 1196 LSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFG 1255
Query: 1329 VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLE 1388
+ PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+REL E
Sbjct: 1256 WESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTE 1315
Query: 1389 LCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
LC + +L K F E K K++ + A +K A ++A +++ + LK
Sbjct: 1316 LCQKWQFELS--KAKDFDSFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEVLNLLK 1369
>gi|222613035|gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
Length = 1570
Score = 598 bits (1541), Expect = e-167, Method: Compositional matrix adjust.
Identities = 495/1636 (30%), Positives = 762/1636 (46%), Gaps = 222/1636 (13%)
Query: 64 LELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAK 123
+E+ + A+ N I L TG GKT +AV+L E A ++Q +
Sbjct: 44 VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHA---------------------RRQFE 82
Query: 124 VIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIAL 182
VI E V G S+ + D W++E+ + E++VM PQILL L H F+ M ++L
Sbjct: 83 VIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAVSL 142
Query: 183 LIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINS 242
LIFDECH A +HPYA+IMK
Sbjct: 143 LIFDECHRAC--GSHPYARIMK-------------------------------------- 162
Query: 243 LENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA---EIKREQ 299
+Y VED +LESF S P ++N +Y+ + L +I ++
Sbjct: 163 --------IYIVEDRNELESF-SPPTT-------IVNKYYDAYMVDFDNLKSKLQIFSDE 206
Query: 300 YISAL-------SRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
+ S L S K D ++ T+ K L+R H + + L +LG + S ++
Sbjct: 207 FDSLLVGLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLG---PIITSEVVKIHI 263
Query: 352 ETMRNELIEAEGNTIDD-SLCRFASQASEVFAAI------CRRDGIASDLSCIEVLKEPF 404
E+++ L ++E SLC S E + I + + S+ E+ K +
Sbjct: 264 ESVK-PLCDSEDCIFSKASLCLHMSYFKEALSLIEEILPQGYGELMKSESGSEELTKRGY 322
Query: 405 FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
S K+ LI I +F + C++FV+RI+TA+A+ ++ + + + +L G +
Sbjct: 323 ISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGSTS 382
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP TV S++QSRGR
Sbjct: 383 KDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRGR 442
Query: 525 ARMPQSEYAFLVDSGN-QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI--YKVD 581
AR SE+ +++ GN Q++ + + N + ++ ++ S + + Y+V
Sbjct: 443 ARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQGMYTYQVQ 502
Query: 582 SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVG 641
S+GA I+A V+L+ +YC KLP D +F PKP F + G C + LP NA IVG
Sbjct: 503 STGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVG 562
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM---LFSSDSDSYEGEG 698
SS +K+ L+A + LH+LG LND+L+P +EPM ++D G G
Sbjct: 563 PLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-----LTEEPMDTDFTTADEKCISGPG 617
Query: 699 S--RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEA 756
+ R ELH L +W + LN Y + F+ D Y F L ++ L +
Sbjct: 618 TTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDDDV 677
Query: 757 EHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR-------SEFN 801
K+DL L + V T + P G +Q + FQE F I R S
Sbjct: 678 APSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQ 737
Query: 802 SEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDR 856
+F+ K + ++ + YLLLP+ I S+ W+ I C + D
Sbjct: 738 RDFI-FKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDE 796
Query: 857 KSLPSHGPLQLHNGWSSE-----------SDVENSLVYATHKKWFYLVTNIVFEKNGYSP 905
+P + Q G E S +++S+V + H Y V +++ +
Sbjct: 797 NVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDS 856
Query: 906 Y------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLEDSES-- 956
+ K S +S VD+ YGI ++HP+QPLL K NLL ++ K D +
Sbjct: 857 FDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGK 916
Query: 957 ---HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
E E+ +PPEL L + + DI S LLPS++HRL++L++A +L+ + +
Sbjct: 917 PLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGYN- 973
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
+ ++L+A+TT +C E FSLERLE+LGD+ LKY VG LFL + EG+L+
Sbjct: 974 ---QHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDM 1030
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERT-IHSQ 1128
RS AV N+ L K +LQ Y+RD FDP ++ A G R P C ET H +
Sbjct: 1031 RSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRR 1090
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
Y P + C +GH W+ KTI+D VEALVGA+ G AA ++W GI ++
Sbjct: 1091 YIRDDPSFFVGK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKC 1149
Query: 1189 EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQ 1246
+ + + ++ LS D+ LE L + F +GLLL+A HPS LG CYQ
Sbjct: 1150 DMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQ 1209
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGD+VLD L+T +LY+ + + PG+LTDLRS LV+N+ FA V + + L S
Sbjct: 1210 RLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGS 1269
Query: 1307 NVLSETINNYV-DYMITPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWK 1363
+L E I YV + E + C PKVLGD++ES GA+ +D+ FN++ VW+
Sbjct: 1270 GILLEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWE 1329
Query: 1364 IMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKV--------- 1414
I L P++ L L P RELLELC+ L KG + + E +
Sbjct: 1330 IFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDELLVA 1389
Query: 1415 TGKDKD------VFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPK 1468
G D++ S +L +++ + I +Q SK K V T L+ L SS
Sbjct: 1390 QGHDRNKKRAKAKAASRILADLKQQQGLSI--KQCLSKAKQLDIV--TSDLQFDLTSSGT 1445
Query: 1469 SEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYE 1528
+ +D N + L +G SS + + ++ RS L++
Sbjct: 1446 -------------QLSYSDLNDYHIL-----EGLSS--VKKEVVLPLKMEKGGPRSALFK 1485
Query: 1529 LCAANCWKPPTFDCCKE--------EGLSHLKLFTFRVIVEIEAPE-KIIECIGEPQAKK 1579
LC W P F+ ++ +G + +F + + P+ I GE + K
Sbjct: 1486 LCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITLHIPDATTITFQGERRTDK 1545
Query: 1580 KGAAEHAAEGMLWCLE 1595
K A + A+ ML L+
Sbjct: 1546 KSAQDSASLMMLHKLQ 1561
>gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
Length = 2042
Score = 597 bits (1539), Expect = e-167, Method: Compositional matrix adjust.
Identities = 445/1440 (30%), Positives = 718/1440 (49%), Gaps = 194/1440 (13%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P AR YQ+E +KA+++N IV+L TG GKT IA++L+ A+L RKP C+FL P
Sbjct: 746 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 805
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
V LV QQA+ LK H D + +VLVM P ILL L H F
Sbjct: 806 VVLVTQQAEA------------------LKMHTD----LKVVQVLVMTPAILLDALRHSF 843
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
+ + +I +LI DECHHA K HPYA IM+
Sbjct: 844 LSLSMIKVLIVDECHHAGGK--HPYACIMR------------------------------ 871
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYVTCSEQL 292
VY+ E+ L FV S+P + YQ+ + + +S V E+L
Sbjct: 872 ----------------VYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEKLERL 915
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
IK + L + ++ + K+L R+ ++ +CL++LG+ A A+ L
Sbjct: 916 T-IKHRLSLGTLDL---NSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL---SA 968
Query: 353 TMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIEVLKEP-FFSKKLL 410
+ + + E N +L + F S AS+ F A + G+ ++ I E + K +
Sbjct: 969 SQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQ-GLNWSVANINGNAEAGLLTLKTV 1027
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLVGVNAGLKSMS 469
LI L + ++++CI+FV+R++TA L +L L +W+ ++ G N+GL++ +
Sbjct: 1028 CLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQT 1087
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFIQSRGRARM
Sbjct: 1088 RKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQN 1147
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------SEERIYKVDSS 583
S+Y +V+SG+ + + RM E +D + C S+E +++V+S+
Sbjct: 1148 SDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHS---LVPCPPLPDDSDEPLFRVEST 1204
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTP 643
GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP + P+ ++
Sbjct: 1205 GATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPVKEV--KA 1260
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSSDSDSYEGEGS 699
+++ + K+ CLKA LHK+GAL+D+L+P E + + E + ++++ Y
Sbjct: 1261 EANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCY----- 1315
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLPGEAEH 758
P ++ Q +Q +FY ++ P+ P + + L + +L + +
Sbjct: 1316 -------FPPELVSQ--FSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGN 1366
Query: 759 LKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDD 811
L RG +T L ++ ++FQ +V+LD S N +
Sbjct: 1367 TSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVEN--LMEALNGL 1424
Query: 812 YCESSSSTFYLLLPVIF-HKNS-VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
+ + YLL+P H+ S +DW++IR +L SH L+ H
Sbjct: 1425 HLRDGVALDYLLVPSTHSHETSLIDWEVIRSV----------------NLTSHEVLEKHE 1468
Query: 870 GWSSESD---------------VENSLVYATHKKWFYLVTNIVFEKNGYSPY--KDSDSS 912
S+ V+N+LVY H + Y ++ NG S ++S
Sbjct: 1469 NCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQ 1528
Query: 913 SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+++++ +GI L +PLL + +F L + LH K + + H+ E F +LPPELC
Sbjct: 1529 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDRE--FVELPPELCH 1586
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
+ + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A+TT+K
Sbjct: 1587 VILSPISVDMIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEAITTKK 1641
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
C+++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L + + L
Sbjct: 1642 CEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKL 1701
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
Q +IRD+ F+P + G+ +S + P+ N V + L +
Sbjct: 1702 QGFIRDECFEPKGWMVPGQ----------SSAAYSLVNDTLPESRNIYVASRRN---LKR 1748
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
K++ADVVE+L+GA++ + G AA F+ W+GI+V+F ++ I S + +++
Sbjct: 1749 KSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTK-----IQRDSPIQAEKLVNV 1803
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY YP
Sbjct: 1804 GYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPC 1863
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS--STRE 1328
L PG LTD+RS VNN+ +A VAV + +K +++ S+ L + I+ V S ST
Sbjct: 1864 LSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFG 1923
Query: 1329 VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLE 1388
+ PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+REL E
Sbjct: 1924 WESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTE 1983
Query: 1389 LCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
LC + +L K F E K K++ + A +K A ++A +++ + LK
Sbjct: 1984 LCQKWQFELS--KAKDFDSFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEVLNLLK 2037
>gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
Length = 2033
Score = 591 bits (1524), Expect = e-165, Method: Compositional matrix adjust.
Identities = 439/1446 (30%), Positives = 720/1446 (49%), Gaps = 182/1446 (12%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ 104
S+ + P AR YQ+E +KA+++N IV+ TG GKT IA++L+ ++L RKP
Sbjct: 727 SLTTDQVSASPLHFARSYQVEALEKAIKQNTIVFFETGSGKTLIAIMLLRSYSYLFRKPS 786
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQ 164
C+FL P V LV QQA+ LK H D + +VLVM P
Sbjct: 787 PCFCVFLVPQVVLVTQQAEA------------------LKMHTD----LQVVQVLVMTPA 824
Query: 165 ILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASP 224
ILL L H F+ + +I +LI DECHHA K HPYA IM+
Sbjct: 825 ILLDALRHSFLNLSMIKVLIVDECHHAGGK--HPYACIMR-------------------- 862
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTS 282
VY+ E+ L FV S+P + YQ+ + +
Sbjct: 863 --------------------------VYTCENESVLAGFVPFSTPRFKYYQHMGIPSSKR 896
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALH 342
+S V E+L IK ++ L K ++ + K+L+R+ ++ +CL++LG+ A
Sbjct: 897 ASLVEKLEKLM-IKHRLSLATLDLK---SSTVDSIEKRLSRISSTLTYCLDDLGILLAQK 952
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIE-VL 400
A+ L + + ++ E N +L + F S AS+ F A +G+ ++ I +
Sbjct: 953 AAQSL---SASQNDFVLWGELNMSSVTLVKKFCSDASQAFLADIP-NGLNWSVANINGKV 1008
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLV 459
+ + K + LI L ++ ++++CI+FV+R++TA L +L L +W+ ++
Sbjct: 1009 EAGLLTSKTVCLIETLLSYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVA 1068
Query: 460 GVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
G N+GL++ +R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFI
Sbjct: 1069 GNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFI 1128
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------S 573
QSRGRARM S+Y +V+SG+ +K + RM E + + C S
Sbjct: 1129 QSRGRARMQNSDYLMMVESGDLLTQSRLKKYLSGGKRMREESLHHS---LVPCPPLPDDS 1185
Query: 574 EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPAN 633
+E ++V+S+GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP +
Sbjct: 1186 DELFFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKS 1243
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSS 689
P+ ++ Q++ + K+ CL+A LHK+GAL+D+L+P E A + E + ++
Sbjct: 1244 CPVKEV--KAQANNKVLKQTVCLEACIQLHKVGALSDHLVPDMVVAETVAQKLEKIQYNP 1301
Query: 690 DSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY-REFGLFV 748
+ Y P ++ Q Q +FY ++ P + + L
Sbjct: 1302 EQPCY------------FPPELVSQ--FSVQPETTYHFYLIRMKPSSQRNFHLNDVLLGT 1347
Query: 749 KSLLPGEAEHLKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFN 801
+ +L + + L +G +T L ++ ++FQ +V+LD S N
Sbjct: 1348 RVVLEDDIGNTGFRLEDHKGTIAVTLSYVGAFHLTQEEVLLCRRFQITLFRVLLDHSVKN 1407
Query: 802 SEFVPLGKDDYCESSSSTFYLLLPVIF-HKNS-VDWKIIR-------RCLSSPVFGTPGG 852
+ + YLL+P H+ S +DW++IR L V + G
Sbjct: 1408 --LMEALNGLLLRDGIALDYLLVPSTHSHETSPIDWEVIRSVNLTCHEALEKHVNCSING 1465
Query: 853 SVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV--FEKNGYSPYKDSD 910
+ L +G V+N+LVY H +FY ++ N + ++S
Sbjct: 1466 A--------SRILHTKDGLFCTCVVQNALVYTPHNGYFYCTKGVLNNINANSFLTKRNSG 1517
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPEL 970
+++++ +GI L +PLL + +F L N LH + + E ++ F +LPPEL
Sbjct: 1518 DQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHNYLH--MTKKKKEKEHDKEFVELPPEL 1575
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT 1030
C + + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A+TT
Sbjct: 1576 CHVILSPISVDVIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEAITT 1630
Query: 1031 EKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN 1090
+KCQ++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L + +
Sbjct: 1631 KKCQDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQ 1690
Query: 1091 NLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWL 1150
LQ +IR++ F+P + G+ ++ + P+ N V + L
Sbjct: 1691 KLQGFIRNECFEPKGWMVPGQ----------HSAAYALVNDTLPESRNIYVASRRN---L 1737
Query: 1151 HKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASL 1210
+K++ADVVE+L+GA++ + G +A F+ W+GI+V+F ++ I +S + +
Sbjct: 1738 KRKSVADVVESLIGAYLSEGGELSALMFMNWVGIKVDFTTTK-----IERESPIQAEKLV 1792
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVY 1268
++ +E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY Y
Sbjct: 1793 NVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKY 1852
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE 1328
P L PG LTD+RS VNN+ +A VAV ++ +K ++ S+VL + I+ V S+ +
Sbjct: 1853 PCLSPGLLTDMRSASVNNECYALVAVKENLHKHILHASHVLHKHISRTVSEF--EQSSLQ 1910
Query: 1329 VKEGPRC----PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIR 1384
G C PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+R
Sbjct: 1911 STFGWECDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1970
Query: 1385 ELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLF 1444
EL ELC +L K F E K K++ + A +K A ++A +++
Sbjct: 1971 ELTELCQKSQFELS--KAKDFNYFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEVL 2024
Query: 1445 SKLKAA 1450
+ LK +
Sbjct: 2025 NLLKKS 2030
>gi|218193216|gb|EEC75643.1| hypothetical protein OsI_12390 [Oryza sativa Indica Group]
Length = 1318
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 442/1414 (31%), Positives = 689/1414 (48%), Gaps = 159/1414 (11%)
Query: 91 LLIYELAHLIRKP-QKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCD 148
+L+ AH +R+P + +FL PTV LV QQA+V+E+ V+ FCG
Sbjct: 1 MLLRAYAHRVRRPDSRRFAVFLVPTVVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAAT 60
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK 208
W +++ EVLVM PQILL L H F +++ IALLIFDECH A + N PYA I K+FY
Sbjct: 61 WRSQLEDGEVLVMTPQILLDNLRHSFFRLQDIALLIFDECHRA--RGNAPYACIFKEFYH 118
Query: 209 PDIMK-----VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESF 263
P + +PRIFGM+A+ + K + Q N K I+ +ENL+++KVY+V+ L +
Sbjct: 119 PQLNSSASDPLPRIFGMSATLIYSKDLN-QHNYSKQISEIENLMNSKVYTVDSESALSEY 177
Query: 264 VSSPVVRVYQY--GPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQL 321
+ ++ + + ++ ++ ++C L E ++I AL RKLH SL N +++
Sbjct: 178 IPFASTKIVHFDDSNISSELHANILSCLNGLTE----KHIEALDRKLHG-SSLENAKRRI 232
Query: 322 NRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVF 381
++LH + +CL NLGV A A+ + ++ + G T+D ++ F SE
Sbjct: 233 SKLHHTFVYCLYNLGVWLAAKAAEV-----QSYEENSLSFWGETLDKNVEGFIRNYSE-- 285
Query: 382 AAICRRDGIASDLSCI---EVLKEPF--------FSKKLLRLIGILSTFRLQQHMKCIVF 430
+ +LSC + E F + K+ LI L +R Q ++CIVF
Sbjct: 286 -------EVHRELSCFLKNGHIGEKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVF 338
Query: 431 VNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVA 490
V R++T+ L +L ++ ++ W + G GL S SR I+E FR G++++++A
Sbjct: 339 VQRVITSIVLEPLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIA 398
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNF 550
T++ EEGLD+ +C LVIRFD TV SFIQSRGRARM S+Y L+ + NF
Sbjct: 399 TQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLIGRH-------VFNF 451
Query: 551 SKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN 610
D + T++ F S + + + IS C L + +F
Sbjct: 452 VALGD-----VEAHTNAKKFLASGQIMREESLRLGSIS-----------CQPLENTLYFK 495
Query: 611 PKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
P P+F D GT C + LP ++P+ + + S+ K+ CLKA ++LH +GAL D
Sbjct: 496 PLPRFD-IDKASGT-CTLHLPKSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTD 551
Query: 671 YLLPQEDNATEDEPMLFSSD---SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
LLP+ D ++EP + + SY P +W RL
Sbjct: 552 SLLPELDVPCDEEPDIVVENKIEQPSY-------------FPEEFVDNWRSFS---RLGI 595
Query: 728 YF-----MQFIPDPADRIYREFGL-------FVKS--LLPGEAEHLKVDLHLARGRSVMT 773
Y+ ++ P A L F S LPG ++ V + +
Sbjct: 596 YYCYKISLEGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVG----II 651
Query: 774 KLVPSGIMQAQQFQEMFLKVIL--DRSE-------FNSEFVPLGKDDYCESSSSTFYLLL 824
L ++ A++FQ L ++ D E F+ VP+G YLLL
Sbjct: 652 HLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIG----------VVYLLL 701
Query: 825 PVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVY 883
P++ +DW ++ SSP++ + S LQ +G ++NS+V
Sbjct: 702 PLV--SGRIDWCSMKFS-SSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVC 758
Query: 884 ATHKKWFYLVTNIV-FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRL 942
H FY+++ + + N P D ++ D+ + +G+ L QPLL +
Sbjct: 759 TPHNNIFYVISGFLDLDANSCLPQHDGIVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKA 818
Query: 943 RNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
RN LHN E + Y +LPPELC++ + S + S +PSIM R++ +L++
Sbjct: 819 RNFLHN-CYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLS 877
Query: 1003 IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH 1062
++LK L + + +V +L+ALTT+KCQE FS E LE LGD+FLKY RHLF +
Sbjct: 878 VKLKVQLGPTVQQ-FDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEY 936
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
EG LT+ + N ++N+ L +LA +NL YI + F+P R C E
Sbjct: 937 RLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNP-------RDWIIPCLDYDE 989
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWI 1182
R + + AP+ + ++ + S + K IAD VEAL+GA++ +G KAA +K +
Sbjct: 990 RD-NKKISFLAPNGMYSQRKMS-----IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSL 1043
Query: 1183 GIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG 1242
G+ +EF T I + K + +++ +LE +LG++F LLL+A H S+ G
Sbjct: 1044 GMNIEFH----TEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSG 1099
Query: 1243 --GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYK 1300
CYQRLEFLGDA+LD+L T Y YS YP P LTDLRS VNN +A+ AV K
Sbjct: 1100 PTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNK 1159
Query: 1301 FLIFDSNVLSETINNYVD----YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGF 1356
++ S+ L ++ Y++ PS E G PKVLGD++ES GAI LDS
Sbjct: 1160 HILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIG--LPKVLGDVIESIAGAIYLDSKC 1217
Query: 1357 NLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTG 1416
+ VW+ M L+P+ ++ +P++ L E C+ + + G A+V
Sbjct: 1218 DKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARV-- 1275
Query: 1417 KDKDVFISACATNLSRKEAIRIASQQLFSKLKAA 1450
K + SA + + A ++AS+ + L A
Sbjct: 1276 KAGETTYSATKSGPCKLVAKKLASKAVLKDLIAG 1309
>gi|147833654|emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
Length = 1296
Score = 561 bits (1445), Expect = e-156, Method: Compositional matrix adjust.
Identities = 440/1428 (30%), Positives = 691/1428 (48%), Gaps = 187/1428 (13%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
DP AR YQ+E +KA+++N IV+L TG GKT IA++L+ AHL+RKP I +FL P
Sbjct: 19 DPLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAHLLRKPSPFIAVFLVP 78
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV Q VLVM P ILL L H
Sbjct: 79 KVVLVPQ-------------------------------------VLVMTPAILLNGLRHS 101
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
F K+++I +LIFDECHHA+ K PYA IMK+FY + S
Sbjct: 102 FFKLDMIKVLIFDECHHARGKD--PYACIMKEFYHXQV------------------RSNN 141
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+NLP+ + A + DL S Y P I D + S
Sbjct: 142 SNLPRIFG-----MTASPIKTKGVNDLMHSASCFFCLHYAEWPTILDLLPITFSTSRDNI 196
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC--GALHASYILLSGD 351
+ E FC +++ +C G L LSG+
Sbjct: 197 NMAAE-----------------------------FSFC-DDMDICCWGQLD-----LSGE 221
Query: 352 ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLR 411
E ++N + + + + E+ R + DL + F + K++
Sbjct: 222 EIIKN--FNKDAYKVISTYLPSGTSNPELVXFQYRELSVGDDLEADA--ESGFLTTKVIC 277
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA-SWRCHFLVGVNAGLKSMSR 470
L+G L +R ++++CIVFV R++TA L +L L W ++ G + L+S SR
Sbjct: 278 LVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAGYIAGNASQLQSQSR 337
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+++E+FR G +N++V+T + EEGLD+Q+C LVIRFD TV SFIQSRGRARM S
Sbjct: 338 RVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQNS 397
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAF----TCSEERIYKVDSSGAC 586
+Y +V SG+ + L ++ + M E + S + +E Y V+S+ A
Sbjct: 398 DYLLMVRSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSLDDEEFYWVESTRAI 457
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
++ + LL+ YCS+LP D +F P P+ D+G C I LP + PI + + + +
Sbjct: 458 VTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDMG--TCTIYLPKSCPIQTV--SVRGN 513
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
++ K+ ACL+A ++LHK GAL D L+PQ E+E ++ ++ Y+ E + E+
Sbjct: 514 IKTLKQIACLEACKELHKAGALTDNLVPQ---IVEEEAIVAQDENMPYDDEQATYYPPEL 570
Query: 707 LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
+ P++ Y + LB + ++ P + L V+S L + ++ DL +
Sbjct: 571 INPSLKDPVTPYHCYLIELBQKY-EYEVSPQGIV-----LAVRSELEYDVGNVNFDLQVD 624
Query: 767 RGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEF--VPLGKDDYCESSS 817
RG ++ L ++ ++FQ L+V++DR+ F LG D +
Sbjct: 625 RGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRVLIDRAIDKGVFDRYDLGNDQMVD--- 681
Query: 818 STFYLLLPVIFHK---NSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP-LQLHNGWSS 873
YL+LP + + VDWK CL S F S + P + +G+
Sbjct: 682 ---YLMLPSTNSREIPSIVDWK----CLGSVFFSHENAS---NHMGCFFPRMHTKSGFVC 731
Query: 874 ESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDSDSSSHVDHLISSYGIHLKHPKQ 931
++NS+VY H FY +T I+ E NG S K+ ++ ++ +GI L+ +
Sbjct: 732 SCTLKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGLLTYKEYYXLRHGIELQFDGE 791
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
LL+ + +F ++N L ++ + EL +LPPELC + + S I S SL+PS
Sbjct: 792 KLLKGRRMFVVQNYL--QRCRQQKEKELSNTTVELPPELCVIFMSPISISIIYSFSLIPS 849
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
IMHR+E+LL+A+ LK+ + ++ + ++ +L+A+TT+ CQE F LE LE LGD+FLK
Sbjct: 850 IMHRIESLLLAVNLKN-IHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLETLGDSFLK 908
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
YA + LF EG L+ ++ ++N++L KL L +IR++ FDP ++ G
Sbjct: 909 YAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGD 968
Query: 1112 RCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
+ S G ++ S+ L K IADVVEAL+GAF+ G
Sbjct: 969 QS------------RSHVFGEELLSSTRKIYVSE-RRKLKSKRIADVVEALIGAFLSTGG 1015
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLP--LSASLDMATLEILLGHQFLHRGLL 1229
AA F++W+GI V+F + + K P L ++++ LE +L + F LL
Sbjct: 1016 ETAALIFMRWLGINVDF-------VKVPYKRDFPVILKRHVNVSYLESILNYSFRDPSLL 1068
Query: 1230 LQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
+++ H S+ + CYQRLEFLGDAVLDYL+T +LY YP + PG LTDLRS VNN
Sbjct: 1069 VESLTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNND 1128
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYV-DYMITP-SSTREVKEGPRCPKVLGDLVES 1345
+A AV ++ ++ S L I V B+ P ST + PKVLGD++ES
Sbjct: 1129 CYAQSAVKAKLHQHILHSSQELHRHIVVTVGBFDKLPXESTFGWESESSFPKVLGDVIES 1188
Query: 1346 SLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKG 1405
GAIL+DS +N V++ + L+P++ ++L+P REL ELC ++ + +
Sbjct: 1189 LAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKLHPARELXELCQKEHYXIKRVVVSQN 1248
Query: 1406 GK--FLAEAKVTG-KDKDVFISACATNLSRKEAIRIASQQLFSKLKAA 1450
GK E + G K K S ++ A ++AS+++ LK +
Sbjct: 1249 GKASVTIEVEANGAKHKHTSTS------DKRTAXKLASKEVLKSLKES 1290
>gi|297610684|ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA helicase [Oryza sativa Japonica Group]
gi|31432753|gb|AAP54346.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|255679506|dbj|BAF26812.2| Os10g0485600 [Oryza sativa Japonica Group]
Length = 1458
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 441/1426 (30%), Positives = 660/1426 (46%), Gaps = 223/1426 (15%)
Query: 64 LELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVALVQQQ 121
+E+ + A+ N I L TG GKT +AV+L E A +R + + I +FLAPTV LV QQ
Sbjct: 44 VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQ 103
Query: 122 AKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
+VI E V G S+ + D W++E+ + E++VM PQILL L H F+ M +
Sbjct: 104 FEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAV 163
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
+LLIFDECH A +HPYA+IMK
Sbjct: 164 SLLIFDECHRA--CGSHPYARIMK------------------------------------ 185
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA---EIKR 297
+Y VED +LESF S P ++N +Y+ + L +I
Sbjct: 186 ----------IYIVEDRNELESF-SPPTT-------IVNKYYDAYMVDFDNLKSKLQIFS 227
Query: 298 EQYISAL-------SRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGALHASYILLS 349
+++ S L S K D ++ T+ K L+R H + + L +LG + S ++
Sbjct: 228 DEFDSLLVGLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLG---PIITSEVVKI 284
Query: 350 GDETMRNELIEAEGNTIDD-SLCRFASQASEVFAAI------CRRDGIASDLSCIEVLKE 402
E+++ L ++E SLC S E + I + + S+ E+ K
Sbjct: 285 HIESVK-PLCDSEDCIFSKASLCLHMSYFKEALSLIEEILPQGYGELMKSESGSEELTKR 343
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
+ S K+ LI I +F + C++FV+RI+TA+A+ ++ + + + +L G +
Sbjct: 344 GYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGS 403
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP TV S++QSR
Sbjct: 404 TSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSR 463
Query: 523 GRARMPQSEYAFLVDSGN-QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY--K 579
GRAR SE+ +++ GN Q++ + + N + ++ ++ S + +Y +
Sbjct: 464 GRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQGMYTYQ 523
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
V S+GA I+A V+L+ +YC KLP D +F PKP F + G C + LP NA I
Sbjct: 524 VQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSI 583
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM---LFSSDSDSYEG 696
VG SS +K+ L+A + LH+LG LND+L+P +EPM ++D G
Sbjct: 584 VGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-----LTEEPMDTDFTTADEKCISG 638
Query: 697 EGS--RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG 754
G+ R ELH L +W + LN Y + F+ D Y F L ++ L
Sbjct: 639 PGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDD 698
Query: 755 EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR-------SE 799
+ K+DL L + V T + P G +Q + FQE F I R S
Sbjct: 699 DVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSG 758
Query: 800 FNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPVFGTPGGSV 854
+F+ K + ++ + YLLLP+ I S+ W+ I C +
Sbjct: 759 AQRDFI-FKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQG 817
Query: 855 DRKSLPSHGPLQLHNGWSSE-----------SDVENSLVYATHKKWFYLVTNIVFEKNGY 903
D +P + Q G E S +++S+V + H Y V +++
Sbjct: 818 DENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLIL----- 872
Query: 904 SPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
D+ + D + S G KPL + +H R
Sbjct: 873 ----DTTAEDSFDEMYGSTG-------------KPLLMEKEQIHAR-------------- 901
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
+PPEL L HL
Sbjct: 902 --VPPEL----------------------------------LIHL--------------D 911
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A+TT +C E FSLERLE+LGD+ LKY VG LFL + EG+L+ RS AV N+ L
Sbjct: 912 ILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATL 971
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERT-IHSQYDGRAPDDLN 1138
K +LQ Y+RD FDP ++ A G R P C ET H +Y P
Sbjct: 972 HKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFFV 1031
Query: 1139 AEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI 1198
+ C +GH W+ KTI+D VEALVGA+ G AA ++W GI ++ + + +
Sbjct: 1032 GK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKF 1090
Query: 1199 SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVL 1256
++ LS D+ LE L + F +GLLL+A HPS LG CYQRLEFLGD+VL
Sbjct: 1091 NASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVL 1150
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D L+T +LY+ + + PG+LTDLRS LV+N+ FA V + + L S +L E I Y
Sbjct: 1151 DLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEY 1210
Query: 1317 V-DYMITPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
V + E + C PKVLGD++ES GA+ +D+ FN++ VW+I L P++
Sbjct: 1211 VRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLI 1270
Query: 1374 KFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDK 1419
L L P RELLELC+ L KG + + E + +D+
Sbjct: 1271 TPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDE 1316
>gi|334185717|ref|NP_001154662.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|322518661|sp|Q9LXW7.2|DCL3_ARATH RecName: Full=Endoribonuclease Dicer homolog 3; AltName:
Full=Dicer-like protein 3; Short=AtDCL3
gi|332644322|gb|AEE77843.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1580
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 462/1625 (28%), Positives = 753/1625 (46%), Gaps = 189/1625 (11%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQ 121
Y+L++ + A NII LGTG K+ I LI + K + IFLAPTV LV+QQ
Sbjct: 47 YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNLVKQQ 104
Query: 122 AKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
I + KV + G G + S W++E +++VLVM PQILL L F+K+E+
Sbjct: 105 CCEIRALVNLKVEEYFGAKGVDKWTSQ-RWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG-ASAQANLPK 238
+ LLI DECHH NHPYAK+MK+FY K P+IFG+TAS V+ KG S+ +N
Sbjct: 164 VCLLIIDECHH--TTGNHPYAKLMKEFYHESTSK-PKIFGLTASAVIRKGIVSSPSNYAA 220
Query: 239 SINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKRE 298
++ LE L+D+K+++ E+ E +E F ++ + GP++ + S S CS +L E
Sbjct: 221 QVSELERLMDSKIFNPEEREGVEKFATT-----VKEGPILYNPSPS---CSLELKEKLET 272
Query: 299 QYI--SALSRKLHD---------HQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYI 346
++ A R+L + K+L+ + + CL+NLG +C L A
Sbjct: 273 SHLKFDASLRRLQELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAEVC 332
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCR--FASQASEVFAAICRRDGIASDL--SCIEVLKE 402
L E + + E+E +C+ S + + + D DL + + +
Sbjct: 333 L----EKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVIS 388
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
S KL L +L +FR + +C++ V RI+TA+ + ++ LA +L N
Sbjct: 389 GHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVLYLTENN 448
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
++ I + F+ G++NLL T V EEG + C ++ FDLP+T+ S+ QS+
Sbjct: 449 PSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQ 508
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDS 582
A+ S+ ++ GN ++ D + D M RE++ + + S
Sbjct: 509 KHAKQSNSKSIMFLERGNPKQRDHL------HDLMRREVL---------IQDPEAPNLKS 553
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP-ANAPIHQIVG 641
+ G+GV I +++P +N + +
Sbjct: 554 CPPPVKNGHGVK-----------------------------EIGSMVIPDSNITVSEEAA 584
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRG 701
+ Q+ + ++ L + L L++ LL + N E S S S G R
Sbjct: 585 STQTMSDPPSRNEQLPPCKKLR----LDNNLL--QSNGKEKVASSKSKSSSSAAGSKKRK 638
Query: 702 ELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKV 761
ELH L +W ++ Y F + + +Y F L ++S L + +++
Sbjct: 639 ELHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSSFSLLLESTLAEDVGKVEM 698
Query: 762 DLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYC 813
DL+L R + V + P G +++A+ FQ+ F + + S+ ++
Sbjct: 699 DLYLVR-KLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLL 757
Query: 814 ESSSSTF------YLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKS----- 858
++ +S+ +LLLPV + ++DW I C S F +D +
Sbjct: 758 QTDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQ 817
Query: 859 --------------LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS 904
+ + N S ++ +E +V A H Y + V + + S
Sbjct: 818 CNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMS 877
Query: 905 PYKDSDSS---SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE- 960
P++ SS ++ ++ YGI L HP QPL++ K NLL + E E +
Sbjct: 878 PFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKA 937
Query: 961 --------EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
LPPEL L I + + S+ LLPS+MHRLE+L++A +L+ + S
Sbjct: 938 GNVRKRKPNIHAHLPPEL--LARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCS 995
Query: 1013 FPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTR 1072
+ +S+ +L+A+TT C E FS+ERLE+LGD+ LKY HLFL + DEG+L+R
Sbjct: 996 I-DNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSR 1054
Query: 1073 RRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR----RCPRICSKETERTIHSQ 1128
+R + ++NSNL +L LQ YIR+ F+P ++ A G+ P C +T
Sbjct: 1055 QRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDP 1114
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
+ C GH W+ K+++D EAL+GA+ G A+ +KW+GI V+F
Sbjct: 1115 KFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDF 1174
Query: 1189 EASQVTNIC--ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQ 1246
+ + V +S + ++P L LE + H+F + LL +A H S R Y+
Sbjct: 1175 DPNLVVEAINRVSLRCYIPKEDEL--IELERKIQHEFSAKFLLKEAITHSSL-RESYSYE 1231
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGD+VLD+LIT +L++ Y + PG++TDLRS VNN+ FA VAV + + L +
Sbjct: 1232 RLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCA 1291
Query: 1307 NVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
VL IN+Y+ P T + PK LGD+VES GA+L+D+ +L+ VW++
Sbjct: 1292 TVLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFE 1351
Query: 1367 SFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISAC 1426
L P++ LQL P REL ELC+S + G K A+A + + DV ++
Sbjct: 1352 PLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVK--AQATIQLQLDDVLLTGD 1409
Query: 1427 ATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV-VA 1485
+ + K A+ A+ L ++L+ KT +G +++ ++V +A
Sbjct: 1410 GSEQTNKLALGKAASHLLTQLEKRNISRKTS----------------LGDNQSSMDVNLA 1453
Query: 1486 ADDNVFEKL--KISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCC 1543
+ + E L + +E Q IG ++ GG R L+E C + W PTFD
Sbjct: 1454 CNHSDRETLTSETTEIQSIVIPFIGPINMKKGG-----PRGTLHEFCKKHLWPMPTFDTS 1508
Query: 1544 KE------------EGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGML 1591
+E E + FT + + I E ++ GE + KK + + A +L
Sbjct: 1509 EEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYA-GEARPDKKSSFDSAVVELL 1567
Query: 1592 WCLER 1596
+ LER
Sbjct: 1568 YELER 1572
>gi|414871004|tpg|DAA49561.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1199
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 382/1125 (33%), Positives = 570/1125 (50%), Gaps = 78/1125 (6%)
Query: 390 IASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+ S+ E+ K+ + S K+ LI I +F + + C++FV RI TA+A+ ++
Sbjct: 1 MKSESGSAELTKKGYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNVN 60
Query: 450 LASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
+ + +L G + ++S + L+ FR+G++NLL T V EEG+D+ C VIRF
Sbjct: 61 FSRFSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRF 120
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR---TS 566
DLP TV S++QSRGRAR S Y +++ GN + + I + E + + + T
Sbjct: 121 DLPRTVCSYVQSRGRARKSSSSYVLMIERGNLAQQEHIFRIIRTEYYVKTFALHKQPNTP 180
Query: 567 SDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC 626
S E+ IY V+S+GA I+A V+L+++YC KLP D ++ PKP F G C
Sbjct: 181 SLDLPLQEKYIYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCFEVGLKDGSYQC 240
Query: 627 HIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPML 686
+ +P NA IVG P SS AK+ CL+A + LH+LG L+D+L+P +EPM
Sbjct: 241 TLTMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVP-----LTEEPMD 295
Query: 687 FSSDSD-----SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY 741
+D+ S G R ELH + L +W V LN Y F D +Y
Sbjct: 296 IDTDTTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESETVILNAYTFDFRCDQEGELY 355
Query: 742 REFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKV 793
F L ++S+L + ++DL L + V T + P G +Q + FQE F
Sbjct: 356 AGFVLLMESVLDDDVARSEIDLFLIPNKMVYTTMTPCGKIQLNKEQLCKGKLFQEFFFNG 415
Query: 794 ILDR-------SEFNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRC 841
I R E EF+ K + S YLLLP+ I H ++ W+ + C
Sbjct: 416 IFGRLFHGSRTDELQREFI-FTKGHEIQWGSDNMYLLLPLRNSSQIQHDPNIYWEAVESC 474
Query: 842 LSSPV-----FGTPGGSVDRKSLPSHGP-------LQLHNGWSSESDVENSLVYATHKKW 889
S V G+++ ++L SH + L N S V++S+V + H
Sbjct: 475 -SGTVEQLRNLYLEDGNLNHENLCSHKRSNKGEDIIHLANKSLHFSTVKDSVVLSLHTGR 533
Query: 890 FYLVTNIVFEKNGYSPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
Y V +++ +K + K S +S VD+ YGI ++HP QPLL K
Sbjct: 534 IYSVLDLILDKTADDSFDEMYNGKASPFASFVDYYHQKYGIVIQHPGQPLLLLKQSHNAH 593
Query: 944 NLLHNR-KLEDSESH-----ELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLE 997
NLL ++ K +D + E E+ +PPEL L I + DI S LLPS+MHR++
Sbjct: 594 NLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL--LIHIDVATDILKSFYLLPSVMHRVQ 651
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
+L++A +L+ +S + + ++L+A+TT +C E FSLERLE+LGD+ LKY +G
Sbjct: 652 SLMLASQLRSNISYI----QRIPSSLILEAITTLRCCESFSLERLELLGDSVLKYVIGCD 707
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC--PR 1115
LFL + EG L+ RS AV N+ L K +LQ YIRD FDP ++ A G+ P
Sbjct: 708 LFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYIRDAAFDPRRWVAPGQISLRPF 767
Query: 1116 ICSKETERTIHSQYDGRAPDDLNAEVR--CSKGHHWLHKKTIADVVEALVGAFIDDSGFK 1173
C+ E G DD + V C +GH W+ KT++D VEALVGA+ G
Sbjct: 768 PCNCGIETAFVPFNGGYISDDPSFVVGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIA 827
Query: 1174 AATAFLKWIGIQV--EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
AA ++W GI V + E Q ++ LS D+ LE L + F +GLLL+
Sbjct: 828 AAIWVMRWFGIDVRCDMELVQKAKYNSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLE 887
Query: 1232 AFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
A HPS LG CYQRLEFLGD+VLD LIT +LY+ + + PG+LTDLRS V+N+ F
Sbjct: 888 AISHPSVQELGVDYCYQRLEFLGDSVLDLLITQHLYATHTDVDPGELTDLRSASVSNENF 947
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-PSSTREVKEGPRC--PKVLGDLVESS 1346
A V + + L S +L E + YV + + + C PKVLGD++ES
Sbjct: 948 AQAVVRNNIHNHLQHGSGILLEQVTEYVRSNLEYHGKENQFLQQATCKAPKVLGDIMESI 1007
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG 1406
GAI +D F+++ VWKI+ L P++ L L P RELLELC+ ++ +G
Sbjct: 1008 TGAIFIDVNFDVDLVWKIVEPLLSPMITPDKLALPPYRELLELCSHLGCFIESKCTSEGE 1067
Query: 1407 KFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
+ + E KV +D+ + A + + K A A+ ++ +K G
Sbjct: 1068 ELIIEMKVQLRDEQLI--AQGHDRNGKTAKANAAARILVDMKKRG 1110
>gi|334185719|ref|NP_001154663.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|332644323|gb|AEE77844.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1570
Score = 545 bits (1403), Expect = e-151, Method: Compositional matrix adjust.
Identities = 459/1624 (28%), Positives = 748/1624 (46%), Gaps = 197/1624 (12%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQ 121
Y+L++ + A NII LGTG K+ I LI + K + IFLAPTV LV+QQ
Sbjct: 47 YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNLVKQQ 104
Query: 122 AKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
I + KV + G G + S W++E +++VLVM PQILL L F+K+E+
Sbjct: 105 CCEIRALVNLKVEEYFGAKGVDKWTSQ-RWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKS 239
+ LLI DECHH NHPYAK+MK+FY K P+IFG+TAS V+ K
Sbjct: 164 VCLLIIDECHHTT--GNHPYAKLMKEFYHESTSK-PKIFGLTASAVIRKA---------Q 211
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQ 299
++ LE L+D+K+++ E+ E +E F ++ + GP++ + S S CS +L E
Sbjct: 212 VSELERLMDSKIFNPEEREGVEKFATT-----VKEGPILYNPSPS---CSLELKEKLETS 263
Query: 300 YI--SALSRKLHD---------HQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYIL 347
++ A R+L + K+L+ + + CL+NLG +C L A L
Sbjct: 264 HLKFDASLRRLQELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAEVCL 323
Query: 348 LSGDETMRNELIEAEGNTIDDSLCR--FASQASEVFAAICRRDGIASDL--SCIEVLKEP 403
E + + E+E +C+ S + + + D DL + + +
Sbjct: 324 ----EKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVISG 379
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNA 463
S KL L +L +FR + +C++ V RI+TA+ + ++ LA +L N
Sbjct: 380 HVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVLYLTENNP 439
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
++ I + F+ G++NLL T V EEG + C ++ FDLP+T+ S+ QS+
Sbjct: 440 STNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQK 499
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSS 583
A+ S+ ++ GN ++ D + D M RE++ + + S
Sbjct: 500 HAKQSNSKSIMFLERGNPKQRDHL------HDLMRREVL---------IQDPEAPNLKSC 544
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP-ANAPIHQIVGT 642
+ G+GV I +++P +N + + +
Sbjct: 545 PPPVKNGHGVK-----------------------------EIGSMVIPDSNITVSEEAAS 575
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGE 702
Q+ + ++ L + L L++ LL + N E S S S G R E
Sbjct: 576 TQTMSDPPSRNEQLPPCKKLR----LDNNLL--QSNGKEKVASSKSKSSSSAAGSKKRKE 629
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
LH L +W ++ Y F + + +Y F L ++S L + +++D
Sbjct: 630 LHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSSFSLLLESTLAEDVGKVEMD 689
Query: 763 LHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCE 814
L+L R + V + P G +++A+ FQ+ F + + S+ ++ +
Sbjct: 690 LYLVR-KLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQ 748
Query: 815 SSSSTF------YLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKS------ 858
+ +S+ +LLLPV + ++DW I C S F +D +
Sbjct: 749 TDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQC 808
Query: 859 -------------LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSP 905
+ + N S ++ +E +V A H Y + V + + SP
Sbjct: 809 NTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSP 868
Query: 906 YKDSDSS---SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-- 960
++ SS ++ ++ YGI L HP QPL++ K NLL + E E +
Sbjct: 869 FEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAG 928
Query: 961 -------EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
LPPEL L I + + S+ LLPS+MHRLE+L++A +L+ + S
Sbjct: 929 NVRKRKPNIHAHLPPEL--LARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSI 986
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
+ +S+ +L+A+TT C E FS+ERLE+LGD+ LKY HLFL + DEG+L+R+
Sbjct: 987 -DNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQ 1045
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR----RCPRICSKETERTIHSQY 1129
R + ++NSNL +L LQ YIR+ F+P ++ A G+ P C +T
Sbjct: 1046 RQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPK 1105
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
+ C GH W+ K+++D EAL+GA+ G A+ +KW+GI V+F+
Sbjct: 1106 FFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDFD 1165
Query: 1190 ASQVTNIC--ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQR 1247
+ V +S + ++P L LE + H+F + LL +A H S R Y+R
Sbjct: 1166 PNLVVEAINRVSLRCYIPKEDEL--IELERKIQHEFSAKFLLKEAITHSSL-RESYSYER 1222
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGD+VLD+LIT +L++ Y + PG++TDLRS VNN+ FA VAV + + L +
Sbjct: 1223 LEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCAT 1282
Query: 1308 VLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
VL IN+Y+ P T + PK LGD+VES GA+L+D+ +L+ VW++
Sbjct: 1283 VLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEP 1342
Query: 1368 FLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACA 1427
L P++ LQL P REL ELC+S + G K A+A + + DV ++
Sbjct: 1343 LLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVK--AQATIQLQLDDVLLTGDG 1400
Query: 1428 TNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV-VAA 1486
+ + K A+ A+ L ++L+ KT +G +++ ++V +A
Sbjct: 1401 SEQTNKLALGKAASHLLTQLEKRNISRKTS----------------LGDNQSSMDVNLAC 1444
Query: 1487 DDNVFEKL--KISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
+ + E L + +E Q IG ++ GG R L+E C + W PTFD +
Sbjct: 1445 NHSDRETLTSETTEIQSIVIPFIGPINMKKGG-----PRGTLHEFCKKHLWPMPTFDTSE 1499
Query: 1545 E------------EGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLW 1592
E E + FT + + I E ++ GE + KK + + A +L+
Sbjct: 1500 EKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYA-GEARPDKKSSFDSAVVELLY 1558
Query: 1593 CLER 1596
LER
Sbjct: 1559 ELER 1562
>gi|148907962|gb|ABR17101.1| unknown [Picea sitchensis]
Length = 685
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/558 (50%), Positives = 366/558 (65%), Gaps = 16/558 (2%)
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
+MHRLENLLVAIELK LL+ASFPEG+ V+A +L+A+TTE+C E FSLERLE+LGDAFLK
Sbjct: 1 MMHRLENLLVAIELKELLTASFPEGSLVTASRVLEAITTERCMEGFSLERLEVLGDAFLK 60
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
YAV R LFL++D +DEG+LT++RSNA+ NSNL K A YIRD+ FDP Q+FALGR
Sbjct: 61 YAVSRRLFLVYDKLDEGQLTKKRSNAIKNSNLYKRAKGKGFPAYIRDEYFDPKQYFALGR 120
Query: 1112 RCPRICSKETERTIHS-QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDS 1170
C +C+ E IH + D D V+C+K HHWLH KTIADVVEAL+GA++ DS
Sbjct: 121 PCKNVCTPELVHMIHYFEGDNTMTDTDFTSVKCTKRHHWLHMKTIADVVEALIGAYLVDS 180
Query: 1171 GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
GF AA AFLKWIGI+++F+ S V +CI S++ L L +D+ LE LLG+ F ++GLLL
Sbjct: 181 GFGAALAFLKWIGIEIDFDTSLVGEVCIRSRNNLSLIKCIDIDELERLLGYNFSYKGLLL 240
Query: 1231 QAFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
+AF HPSFN GGCYQRLEFLGDAVLDY+ITSYLYSVYP +KPG LTD+RSM VNN++F
Sbjct: 241 EAFAHPSFNEHNGGCYQRLEFLGDAVLDYIITSYLYSVYPDMKPGYLTDMRSMTVNNESF 300
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVDYM---ITPSSTREVKEGPRCPKVLGDLVESS 1346
A VAV Y +LI S+ LS + YVD+M T + P+CPKVLGD+VES
Sbjct: 301 ACVAVRHGLYMYLIQKSDSLSSAVTKYVDFMKALFTADRDSCDEPEPKCPKVLGDIVESF 360
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKK-- 1404
GA+++D+GF+L+ VWK+ML+ L PI+ L L P+REL E+C ++L L + K
Sbjct: 361 AGALVIDTGFDLDCVWKLMLNILQPIVTPETLCLQPVRELSEVCQHHNLTLDYVKASKGN 420
Query: 1405 GGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILK 1464
G +L EAKV+GK + T S K+A ++AS+ KLK G K LE ++
Sbjct: 421 GNGYLVEAKVSGKKVSGSVGGTGTRTSIKDAKKVASKDALLKLKGFGLEHPNKILEVFIR 480
Query: 1465 SSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARS 1524
+ K A L+G ++ A N+ K+ EP+ S SP+ + L + + S
Sbjct: 481 TCRKGSAVLVGKNKAE----QATSNIKIAGKLEEPKFNS-----SPASCSRDLHSVRSTS 531
Query: 1525 RLYELCAANCWKPPTFDC 1542
L C A+ K + C
Sbjct: 532 ELIPPCMASLQKNSSTVC 549
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1521 SARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKI-IECIGEPQAKK 1579
SA+S L E C W+ P++ C +EEG+ H K FT+ ++ + P I IEC+GEP K
Sbjct: 607 SAKSSLNEFCQKKSWEVPSWVCYQEEGMPHQKSFTYMAVLRL--PGNISIECLGEPMKNK 664
Query: 1580 KGAAEHAAEGMLWCLEREGYL 1600
+ A E A+ G LW L +GYL
Sbjct: 665 RLAMESASRGALWWLNSQGYL 685
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 407/1329 (30%), Positives = 598/1329 (44%), Gaps = 216/1329 (16%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ ++ LI IL ++ + + I+FV R+VTA L + L L RC L+G N
Sbjct: 48 TPRVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKVFAELPSLGFIRCASLIGHNNN- 106
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 107 QEMRSCQMQDTITKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 166
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD---------AFTCSEER 576
R P S+Y +++ GN ++N E+ + +E ++RT S +
Sbjct: 167 RKPGSDYILMLERGNMSHEAFLRNARNSEETLRKEAIERTDLSHLDGTSMLSPVDISPDS 226
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
+Y+V+S+GA +S V L+H YCS+LP D + +P+F + GG+ C + LP
Sbjct: 227 MYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMQKHEKPGGSTEYSCKLQLP 286
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP ++ G SS+ A++ CL A + LH++GA D LLP + + E E + +
Sbjct: 287 CNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDMLLP-DRGSGEGEKTEQNDEG 345
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWT--------KSQYPVRLNFYFMQFI-----PDPAD 738
D G E V +L W SQ+ ++L Y + + DP
Sbjct: 346 DPLPGTARHREFFPEGVAEILHGEWILSGRDGYQSSQF-IKLYLYSVNCVNIGTSKDPFV 404
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRS 798
F L + L E +DL +AR LV G ++ + Q + LK
Sbjct: 405 TQLSNFALIFGNELDAEVLSTTMDLFVARTIITKASLVFRGPIEITESQLILLK------ 458
Query: 799 EFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHK-----NSVDWKIIRRCLSSPVFG 848
F+ + + D + S++ + YL +PV K +DW ++ ++S +
Sbjct: 459 SFHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCMDLLREIDWTLVNSIVNSDAWN 518
Query: 849 TP-------------------------------GGSVDRKSLPSHG-------------- 863
P G + +K+ P++G
Sbjct: 519 NPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDVVKAS 578
Query: 864 PLQLHNGWSSESDVENS------------------LVYATHKKWFYLVTNIVFEKNGYS- 904
L GW +D +N +V A H + V +I + N +
Sbjct: 579 GLVPGRGWGHFNDYQNKGKLFMADSCWDAKDLAGMVVTAAHSGKRFYVDSICYNMNAENS 638
Query: 905 -PYKDS-----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHE 958
P K+ + SS D+ YG+ L + KQPL+RA+ + +NLL R E SE+
Sbjct: 639 FPRKEGYLGPLEYSSFADYYKQKYGVELVYKKQPLIRARGVSYCKNLLSPR-FEHSEASN 697
Query: 959 LE-------EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA 1011
E Y+ LPPELC + + S G+ LPSIM R+E++L+AI+LK ++
Sbjct: 698 GEFSENLDKTYYVYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAIQLKDII-- 753
Query: 1012 SFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
G V A +L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LT
Sbjct: 754 ----GYPVPANKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 809
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----------RRCPRIC---- 1117
R R V+N L + A NLQ YI+ F P ++ A G P I
Sbjct: 810 RMRQQMVSNMILYQYALNKNLQSYIQADRFAPSRWAAPGVLPVFDEETRDSEPSIFDEEF 869
Query: 1118 --SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
S E ++ ++ YDG + + S + L KT+ADVVEAL+G + G A
Sbjct: 870 TPSSELQKNLYDDYDGDSMQEDGEIEGDSSCYRVLSSKTLADVVEALIGVYYVAGGKIAT 929
Query: 1176 TAFLKWIGIQVEFEASQVTNICISSKSF-LPLS--ASLDMATLEILLGHQFLHRGLLLQA 1232
+KWIGI E + ++ SSK + +P S S++ TLE LG +F ++GLL++A
Sbjct: 930 NHLMKWIGINAELDPQEIP----SSKPYNIPESIIKSINFDTLEGALGIKFQNKGLLVEA 985
Query: 1233 FVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S G CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA
Sbjct: 986 ITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFAR 1045
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSL 1347
VAV + L S+ L I +V + + P + PKVLGD+ ES
Sbjct: 1046 VAVKHKLHVHLRHGSSALETQIREFVKDVQEELSKPGFNSFGLGDCKAPKVLGDIFESIA 1105
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK 1407
GAI LDSG + VWK+ LDP++ L ++P+REL E C L++ + + G
Sbjct: 1106 GAIFLDSGCATSVVWKVFQPLLDPMVTPDTLPMHPVRELQERCQQQAEGLEYKASRTGNV 1165
Query: 1408 FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSP 1467
E V G V A N +K A ++A++ LK K K E
Sbjct: 1166 ATVEVLVDGIQIGV-----AQNPQKKMAQKLAARNALVVLKEKETAAK-KDTE------- 1212
Query: 1468 KSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLY 1527
K E + GS + R L
Sbjct: 1213 ---------------------------KDGEKKNGS----------------QFTRQTLN 1229
Query: 1528 ELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAA 1587
++C W P + C E G +H K F + V V ECIGEP K A + AA
Sbjct: 1230 DICLRRQWPMPQYRCINEGGPAHAKRFVYAVRVNTSDSGWTDECIGEPMPSVKKAKDSAA 1289
Query: 1588 EGMLWCLER 1596
+L L R
Sbjct: 1290 VLLLELLNR 1298
>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
distachyon]
Length = 1888
Score = 501 bits (1291), Expect = e-138, Method: Compositional matrix adjust.
Identities = 398/1307 (30%), Positives = 600/1307 (45%), Gaps = 201/1307 (15%)
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN 471
LI IL ++ + + I+FV R+VTA L + L L+ RC L+G N + M +
Sbjct: 632 LIKILLKYQHTEDFRAIIFVERVVTALVLPKVFAELPSLSFIRCASLIGHNNN-QEMRTS 690
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+
Sbjct: 691 QMQDTIAKFRDGRITLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 750
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS---------DAFTCSEERIYKVDS 582
Y +V+ N ++N E+ + +E ++RT + S + +Y+V+S
Sbjct: 751 YILMVERANLSHETFLRNARNSEETLRKEAIERTDLSHLDGIPMLNPIHTSPDSMYQVES 810
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIH 637
+GA +S V L+H YCS+LP D + +P+F + GG++ C + LP NAP
Sbjct: 811 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMQKHEKPGGSVEYSCKLQLPCNAPFE 870
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
++ G SS+ A++ CL A + LH++ A D LLP + E E + + D G
Sbjct: 871 KLEGPICSSIRLAQQAVCLAACKKLHEMSAFTDMLLP-DRGIGEGEKTEQNDEGDPVPGT 929
Query: 698 GSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFI-----PDPADRIYREF 744
E + V VLR W SQ+ ++L Y++ + DP F
Sbjct: 930 ARHREFYPEGVAEVLRGEWILSGRDCCQSSQF-IKLYMYYVNCVDVGTSKDPFLAQLSNF 988
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK--------VILD 796
+ + L E + +DL +A+ LV G ++ + Q + LK ++LD
Sbjct: 989 SIVFGNELDAEVLSMTMDLFVAKTMITKASLVFHGPIEITERQLVLLKSFHVRLMSIVLD 1048
Query: 797 RSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR------- 839
S FVP+G + ++ + L+ I + ++ + + +
Sbjct: 1049 VDVDPSTTPWDPAKAYLFVPVGAEKCTDAFREIDWTLVNSIVNTDAWNNPLQKARPDVYL 1108
Query: 840 ----RCL---------------------SSPVFGTPGG--------------SVDRKSL- 859
R L + P +G G + DR L
Sbjct: 1109 GTNERTLGGDRREYGFGKLRNGTTFGQKAHPTYGIRGAIAEFDVVKASGLVPARDRGFLN 1168
Query: 860 --PSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS-----D 910
HG L + + D+ +V A H + V +I + N + P K+ +
Sbjct: 1169 DSQKHGKLFMADSCWDAKDLAGMVVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPLE 1228
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--------EEY 962
SS+ D+ YG+ L + KQPL+RA+ + +NLL R E SE+ E + Y
Sbjct: 1229 YSSYADYYKQKYGVELVYTKQPLIRARGVSYCKNLLSPR-FEHSEAKEGVNFSENHDKTY 1287
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
+ LPPELC + + S G+ LPSIM R+E++L+A++LK ++ P A
Sbjct: 1288 YVYLPPELCVVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKEIIDYPVP------AT 1339
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N
Sbjct: 1340 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMV 1399
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALG----------RRCPRICSKET--ERTIHSQYD 1130
L + A LQ YI+ F P ++ A G P I +E + +D
Sbjct: 1400 LYQFALNKTLQSYIQADRFAPSRWAAPGVLPVFDEETRESEPSIFGEEPVLGNEVQKDFD 1459
Query: 1131 GRAPDDL--NAEVRCSKG-HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE 1187
D + + E+ G + L KT+ADVVEAL+G + G AA +KWIGI E
Sbjct: 1460 DDYADSIQEDGEIDGDSGCYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAE 1519
Query: 1188 FEASQVTNICISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GC 1244
+ ++ I + +P S S++ TLE ++G +F ++G L++A H S G C
Sbjct: 1520 LDPQEIPPPKIYN---IPDSIMRSINFDTLESIMGIKFQNKGFLVEAITHASRPSSGVSC 1576
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + L
Sbjct: 1577 YQRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1636
Query: 1305 DSNVLSETINNYVDYM---ITPSSTREVKEGP-RCPKVLGDLVESSLGAILLDSGFNLNT 1360
S+ L I +V + I+ S G + PKVLGD++ES GAI LDSG++ +
Sbjct: 1637 GSSALETQIREFVKDVREEISKSGFNSFGLGDCKAPKVLGDIIESIAGAIFLDSGYDTSA 1696
Query: 1361 VWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD 1420
VWK+ LDP++ L ++PIREL E C L++ + + G E V G
Sbjct: 1697 VWKVFQPLLDPMVTPETLPMHPIRELQERCQQQAEGLEYKASRAGNVATVEVFVDGIQIG 1756
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETP 1480
V A N +K A ++A++ +LK +EA+ D+
Sbjct: 1757 V-----AQNPQKKMAQKLAARNAL----------------VVLKEKESAEAKETEKDDDK 1795
Query: 1481 INVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTF 1540
N +VF R L ++C W P +
Sbjct: 1796 KNGA----HVF------------------------------TRQTLNDICLRRQWPMPQY 1821
Query: 1541 DCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAA 1587
C E G +H K F + V V ECIGEP K A + AA
Sbjct: 1822 RCINEGGPAHAKRFVYAVRVNTSDRGWTDECIGEPMPSVKKAKDSAA 1868
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 137/266 (51%), Gaps = 46/266 (17%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA-HLI 100
A+ + AQ+ ++ AR YQLE+ ++A N I +L TG GKT IAVLLI + ++
Sbjct: 253 ADRAGAAQRAKPVAEEQARHYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSICDKML 312
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLV 160
++ +K + +FL P V LV Y+VLV
Sbjct: 313 KENKKMLAVFLVPKVPLV-------------------------------------YQVLV 335
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFG 219
M QILL L H IKM+ I LLI DECHHA K HPY+ +M +FY K P +FG
Sbjct: 336 MTAQILLNILRHSIIKMDAIHLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPVVFG 393
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV KG ++Q + I +LE+ LD+ V +++D ++LE V P V Y
Sbjct: 394 MTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPFEVVIHY----- 448
Query: 280 DTSSSYVTCSEQLAEIKREQYISALS 305
D +++ + E++ +++ +ALS
Sbjct: 449 DKAATLCSLHERIKQMEAAVEEAALS 474
>gi|168039663|ref|XP_001772316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676303|gb|EDQ62787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1275
Score = 491 bits (1265), Expect = e-135, Method: Compositional matrix adjust.
Identities = 339/987 (34%), Positives = 501/987 (50%), Gaps = 104/987 (10%)
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS----DAFTCSEERIYKVDSSGACI 587
Y L GN + ++ F E+ M E++ R + A S ++V+S+GA +
Sbjct: 9 YMSLFSRGNNEQSQRLEQFLLTEESMKEEVLSRIKNAEDVGAPETSTIETFRVESTGATM 68
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSM 647
S VSLLH+YC++L HD F+ P P+F Y +D G C I LP +A + + G P SS
Sbjct: 69 STLCSVSLLHQYCARLAHDSFYTPTPQFSYSEDGSGVKCTIKLPTDALVQSVEGRPVSSQ 128
Query: 648 EAAKKDACLKAIEDLHKLGALND-YLLPQEDNATEDEPMLFSSDSDSYEGEGSRGE---- 702
AK+ ACL A E L+ GAL + LL ++NA +S D+ + E + G
Sbjct: 129 ADAKRVACLIACERLYDAGALTELLLLKSKENA-------YSLDAIAPESNSTTGRDPLP 181
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
++VP +W V L+ Y + F+ P DR Y FGLF+++ + EA ++V+
Sbjct: 182 SRSIIVPDAFSGTWGSGLNSVELHAYAISFVATPNDRAYVNFGLFLEADMGPEAGSIEVE 241
Query: 763 LHLARGRSVMTKLVPSGIM--------QAQQFQEMFLKVILDRSEFNSEFVPLGKDDYC- 813
L L+ R V K P G + A+ FQE +LD+ P+ +
Sbjct: 242 LQLSNRRLVNAKCSPCGTILFEPDQLRNAKSFQERIFSSVLDQKP------PVPNIELSG 295
Query: 814 ESSSSTFYLLLPVIFHKN----SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
E +S+ YLLLP+ ++ S+DW I +S + G +P L+L +
Sbjct: 296 EWNSNRLYLLLPLKEKQDALPLSIDWDCIEDLISDVMKGYNTLEEVPSEIPRSSLLRLID 355
Query: 870 GWSSESDVENSLVYATH--KKWFYLVTNIVFEKNGYSP--YKDSDSSSHVDHLISSYGIH 925
G+ V NSL+ H K+ Y ++ + NG SP K S +S+ D+ + +
Sbjct: 356 GYFPVEHVTNSLIQTEHTGKRCLYCARELIPDMNGQSPMIMKVSKYNSYSDYYLKKHNRT 415
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE--EYFDDLPPELCQLKIIGFSKDIG 983
L +QP+L+AKPL ++ NLL R + + E + E +LP ELC++ + G S +
Sbjct: 416 LNFVEQPMLKAKPLIQVNNLLTQRTTSERPAAEEQKTESLVELPLELCKIMVKGLSCALT 475
Query: 984 SSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLE 1043
+ +SLLPS MHRLE LL+A++ + L + P + V A ++L+A+TT KCQE FSLE LE
Sbjct: 476 NGISLLPSFMHRLEGLLLAVQFRKSLPS--PHSSPVPANLMLEAITTSKCQESFSLEGLE 533
Query: 1044 ILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV--------- 1094
+LGDAFL+ +V LFLLH+ +DEGEL++RR+N + N L +L + V
Sbjct: 534 LLGDAFLEVSVSERLFLLHNRLDEGELSKRRTNLICNKMLERLGRERGIMVSKSCRDTTR 593
Query: 1095 ----------------YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLN 1138
YIRD F P ++ GR +ET+ +
Sbjct: 594 STYKQFEIMINLVSENYIRDTQFSPKEWATPGR------VRETQCKLPP----------- 636
Query: 1139 AEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI 1198
L KTIADV EAL+GA G +AA A + W+G +V +S
Sbjct: 637 -----------LQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGCEVGVSSSIREEART 685
Query: 1199 SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG-CYQRLEFLGDAVLD 1257
L L + ++ LEILL ++F ++GLL++A H S R G CYQRLEFLGDAVLD
Sbjct: 686 RVHGQLELLSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHSGDCYQRLEFLGDAVLD 745
Query: 1258 YLITSYLYSVYPKLK--PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
+LIT + Y+ LK PG LTDLRS VNN+ FA VAV + + +L+ +S+ L+ ++
Sbjct: 746 FLITKHFYANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDK 805
Query: 1316 YVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF 1375
YV T + G PKVL DLVES GA+ LDSG+ L+TVW + L P++
Sbjct: 806 YVHGSTTDAQCHGWN-GDSGPKVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPLVTP 864
Query: 1376 SNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLA--EAKVTGKDKDVFISACATNLSRK 1433
+ L+L PIREL ELC + P+ KK + + + VT + KD I+ K
Sbjct: 865 ATLRLEPIRELWELCQTEKFGE--PNYKKKREAMGDFDMTVTVELKDETITGVGRKPDEK 922
Query: 1434 EAIRIASQQLFSKLKAAGYVPKTKSLE 1460
A ++A+ Q LK GY ++ LE
Sbjct: 923 SARKVAAIQALETLKTLGYEHGSRRLE 949
Score = 40.8 bits (94), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 1485 AADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
A D+ + K S P + D+G L G ARS L +C + W P +
Sbjct: 1162 AGVDDGYSKQTSSAPHLRPAPDVGL-RLVKG-----EARSLLNAMCMKHRWGDPVYTLVS 1215
Query: 1545 EEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKK--KGAAEHAAEGMLWCLEREGYL 1600
+ G+SH LF + V I + E E + ++ KGA + AA +L L EG+
Sbjct: 1216 KGGVSHAPLFLYMVQTTIILRGRAFEIDAEGEVERDIKGAKDSAAARLLEWLGEEGFF 1273
>gi|15229816|ref|NP_189978.1| protein dicer-like 3 [Arabidopsis thaliana]
gi|7594553|emb|CAB88120.1| putative protein [Arabidopsis thaliana]
gi|94450858|gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana]
gi|332644321|gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1531
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 440/1624 (27%), Positives = 720/1624 (44%), Gaps = 236/1624 (14%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQ 121
Y+L++ + A NII LGTG K+ I LI + K + IFLAPTV L Q
Sbjct: 47 YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNL---Q 101
Query: 122 AKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
I + KV + G G + S W++E +++VLVM PQILL L F+K+E+
Sbjct: 102 CCEIRALVNLKVEEYFGAKGVDKWTSQ-RWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 160
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKS 239
+ LLI DECHH NHPYAK+MK
Sbjct: 161 VCLLIIDECHHTT--GNHPYAKLMK----------------------------------- 183
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQ 299
+++ E+ E +E F ++ + GP++ + S S CS +L E
Sbjct: 184 -----------IFNPEEREGVEKFATT-----VKEGPILYNPSPS---CSLELKEKLETS 224
Query: 300 YI--SALSRKLHD---------HQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYIL 347
++ A R+L + K+L+ + + CL+NLG +C L A L
Sbjct: 225 HLKFDASLRRLQELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAEVCL 284
Query: 348 LSGDETMRNELIEAEGNTIDDSLCR--FASQASEVFAAICRRDGIASDL--SCIEVLKEP 403
E + + E+E +C+ S + + + D DL + + +
Sbjct: 285 ----EKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVISG 340
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNA 463
S KL L +L +FR + +C++ V RI+TA+ + ++ LA +L N
Sbjct: 341 HVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVLYLTENNP 400
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
++ I + F+ G++NLL T V EEG + C ++ FDLP+T+ S+ QS+
Sbjct: 401 STNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQK 460
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSS 583
A+ S+ ++ GN ++ D + D M RE++ + + S
Sbjct: 461 HAKQSNSKSIMFLERGNPKQRDHL------HDLMRREVL---------IQDPEAPNLKSC 505
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP-ANAPIHQIVGT 642
+ G+GV I +++P +N + + +
Sbjct: 506 PPPVKNGHGVK-----------------------------EIGSMVIPDSNITVSEEAAS 536
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGE 702
Q+ + ++ L + L L++ LL + N E S S S G R E
Sbjct: 537 TQTMSDPPSRNEQLPPCKKLR----LDNNLL--QSNGKEKVASSKSKSSSSAAGSKKRKE 590
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
LH L +W ++ Y F + + +Y F L ++S L + +++D
Sbjct: 591 LHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSSFSLLLESTLAEDVGKVEMD 650
Query: 763 LHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCE 814
L+L R + V + P G +++A+ FQ+ F + + S+ ++ +
Sbjct: 651 LYLVR-KLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQ 709
Query: 815 SSSSTF------YLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKS------ 858
+ +S+ +LLLPV + ++DW I C S F +D +
Sbjct: 710 TDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQC 769
Query: 859 -------------LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSP 905
+ + N S ++ +E +V A H Y + V + + SP
Sbjct: 770 NTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSP 829
Query: 906 YKDSDSS---SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-- 960
++ SS ++ ++ YGI L HP QPL++ K NLL + E E +
Sbjct: 830 FEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAG 889
Query: 961 -------EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
LPPEL L I + + S+ LLPS+MHRLE+L++A +L+ + S
Sbjct: 890 NVRKRKPNIHAHLPPEL--LARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSI 947
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
+ +S+ +L+A+TT C E FS+ERLE+LGD+ LKY HLFL + DEG+L+R+
Sbjct: 948 -DNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQ 1006
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR----RCPRICSKETERTIHSQY 1129
R + ++NSNL +L LQ YIR+ F+P ++ A G+ P C +T
Sbjct: 1007 RQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPK 1066
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
+ C GH W+ K+++D EAL+GA+ G A+ +KW+GI V+F+
Sbjct: 1067 FFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDFD 1126
Query: 1190 ASQVTNIC--ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQR 1247
+ V +S + ++P L LE + H+F + LL +A H S R Y+R
Sbjct: 1127 PNLVVEAINRVSLRCYIPKEDEL--IELERKIQHEFSAKFLLKEAITHSSL-RESYSYER 1183
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGD+VLD+LIT +L++ Y + PG++TDLRS VNN+ FA VAV + + L +
Sbjct: 1184 LEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCAT 1243
Query: 1308 VLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
VL IN+Y+ P T + PK LGD+VES GA+L+D+ +L+ VW++
Sbjct: 1244 VLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEP 1303
Query: 1368 FLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACA 1427
L P++ LQL P REL ELC+S + G K A+A + + DV ++
Sbjct: 1304 LLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVK--AQATIQLQLDDVLLTGDG 1361
Query: 1428 TNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV-VAA 1486
+ + K A+ A+ L ++L+ KT +G +++ ++V +A
Sbjct: 1362 SEQTNKLALGKAASHLLTQLEKRNISRKTS----------------LGDNQSSMDVNLAC 1405
Query: 1487 DDNVFEKL--KISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
+ + E L + +E Q IG ++ GG R L+E C + W PTFD +
Sbjct: 1406 NHSDRETLTSETTEIQSIVIPFIGPINMKKGG-----PRGTLHEFCKKHLWPMPTFDTSE 1460
Query: 1545 E------------EGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLW 1592
E E + FT + + I E ++ GE + KK + + A +L+
Sbjct: 1461 EKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYA-GEARPDKKSSFDSAVVELLY 1519
Query: 1593 CLER 1596
LER
Sbjct: 1520 ELER 1523
>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
Length = 1543
Score = 488 bits (1255), Expect = e-134, Method: Compositional matrix adjust.
Identities = 367/1183 (31%), Positives = 561/1183 (47%), Gaps = 164/1183 (13%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ L+ IL ++ + + I+FV R+V A L + L L+ RC L+G N
Sbjct: 282 TPKVQSLVKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVRCASLIGHNNS- 340
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M + M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 341 QEMRTSQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 400
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCS 573
R P S+Y +V+ GN ++N E+ + RE ++RT S D+ +
Sbjct: 401 RKPGSDYILMVERGNLSHGAFLRNARNSEETLRREAIERTDLSHLKDTSRLISVDSVPGT 460
Query: 574 EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHI 628
+Y+V+S+GA +S V L+H YCS+LP D + +P+F + GG C +
Sbjct: 461 ---VYQVESTGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 517
Query: 629 ILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFS 688
LP+N P ++ G SSM A++ CL A + LH++GA D LLP + + E E + +
Sbjct: 518 QLPSNVPFEKLEGPLCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREQVDQN 577
Query: 689 SDSDSYEGEGSRGELHEMLVPAVL--------RQSWTKSQYPVRLNFYFMQFI-----PD 735
+ + G E + V +L R W S + L Y ++ + D
Sbjct: 578 DEGEPLPGTARHREFYPEGVANILQGEWILCGRDGWNNSNKLLHLYMYAVKCVNSGASKD 637
Query: 736 PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL 795
P EF + + L E + +DL +AR LV G + + Q LK
Sbjct: 638 PFLTQVSEFAVLFGNELDAEVLSMSMDLFIARTIITKASLVFRGPIDITENQLASLK--- 694
Query: 796 DRSEFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHK-----NSVDWKIIRRCLSSP 845
F+ + + D E S++ + YL +P++ K +DW ++ + +
Sbjct: 695 ---SFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKFVNPIKEIDWDLVENVIRTD 751
Query: 846 VFGTP-------------------------------GGSVDRKSLPSHG----------- 863
V+ P G + +KS P++G
Sbjct: 752 VWSNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVV 811
Query: 864 ----------------------PLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKN 901
L + + + ++ +V A H + V +I ++
Sbjct: 812 KASGLVPNRAGVEIQKVELPKGKLMMADSYVGAEELVGRIVTAAHSGKRFYVDSIRYDMT 871
Query: 902 GYS--PYKDS-----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLED 953
+ P K+ + SS+ D+ YG+ L +QPL+R + + +NLL R + D
Sbjct: 872 AENSFPRKEGYLGPLEYSSYADYYKQKYGVELMFKQQPLIRGRGVSYCKNLLSPRFEHSD 931
Query: 954 SESHELEEYFDD-----LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHL 1008
S E EE D LPPELC + + S G+ LPSIM R+E++L+AI+LK +
Sbjct: 932 SNEGESEEILDKTYYVFLPPELCLVHPLPGSLVRGA--QRLPSIMRRVESMLLAIQLKDI 989
Query: 1009 LSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEG 1068
+ S P A +L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG
Sbjct: 990 IHYSVP------ALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1043
Query: 1069 ELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI--CSKETERTIH 1126
+LTR R V+N L + A LQ YI+ F P ++ A G P +K+ + ++
Sbjct: 1044 QLTRMRQQMVSNMVLYQYALIKGLQSYIQADRFAPSRWAAPG-VLPVFDEDTKDGDSSLF 1102
Query: 1127 SQY--------------DGRAPDDL-NAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDS 1170
Q DG D++ + E+ S + L KT+ADVVEAL+G + +
Sbjct: 1103 DQEKSLIENKPKVDHADDGYEDDEIEDGELESDSSSYRVLSSKTLADVVEALIGIYYVEG 1162
Query: 1171 GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
G AA ++WIGI+VEF+ ++ + S + S+D LE L +F RGLL+
Sbjct: 1163 GKTAANHLMRWIGIKVEFDHEEIDSAIRPSNVPESILRSIDFDALEGALNIKFQDRGLLV 1222
Query: 1231 QAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
+A H S G CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ F
Sbjct: 1223 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENF 1282
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVES 1345
A VAV+ + L S+ L + I ++V D + P + PKVLGD+VES
Sbjct: 1283 ARVAVNHKLHVHLRHGSSALEKQIRDFVREVQDELSKPGFNSFGLGDCKAPKVLGDIVES 1342
Query: 1346 SLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKG 1405
GAI LDSG + VWK+ L P++ L ++P+REL E C L++ + + G
Sbjct: 1343 IAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSG 1402
Query: 1406 GKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
E + G V A N +K A ++A++ LK
Sbjct: 1403 NLATVEVFIDGVQVGV-----AQNPQKKMAQKLAARNALVILK 1440
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQAN 235
ME I LLI DECHHA K HPY+ +M +FY + K P +FGMTASPV KG S+Q +
Sbjct: 1 MEAINLLILDECHHAVKK--HPYSLVMSEFYHTTLKEKRPSVFGMTASPVNLKGVSSQVD 58
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA-- 293
I +LE+ LD+ V +++D ++LE V P V +Y D +++ + E++
Sbjct: 59 CAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEY-----DKAATLWSLHEKIKQM 113
Query: 294 EIKREQYISALSRK 307
E+ E+ + SR+
Sbjct: 114 EVAVEEAAQSSSRR 127
Score = 47.0 bits (110), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%)
Query: 1523 RSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGA 1582
R L ++C W P + C E G +H K FTF V V EC+GEP K A
Sbjct: 1467 RQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKA 1526
Query: 1583 AEHAAEGMLWCLER 1596
+ AA +L L +
Sbjct: 1527 KDSAAVLLLELLNK 1540
>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
Length = 1883
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 394/1317 (29%), Positives = 597/1317 (45%), Gaps = 203/1317 (15%)
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN 471
LI IL ++ + + I+FV R+VTA L +L L L+ RC L+G N + M
Sbjct: 629 LIKILLKYQHTEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNN-QEMRAC 687
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+
Sbjct: 688 QMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 747
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT---------CSEERIYKVDS 582
Y +++ GN ++N E+ + +E M+RT S +Y+V+S
Sbjct: 748 YILMLERGNISHETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVES 807
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIH 637
+GA +S V L+H YCS+LP D + P+F ++ GG++ C + LP NAP
Sbjct: 808 TGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFE 867
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
++ G SS+ A++ CL A + LH++GA D LLP + + E E + + + G
Sbjct: 868 KLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDTLLP-DRGSGEGEKTEQNDEGEPLPGT 926
Query: 698 GSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFI-----PDPADRIYREF 744
E + V +LR W SQ+ ++L Y + + DP F
Sbjct: 927 ARHREFYPEGVADILRGEWILSGRDGYQNSQF-IKLYMYSVNCVNVGTSKDPFVTQLSNF 985
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK--------VILD 796
+ + L E +DL +AR LV G ++ + Q + LK ++LD
Sbjct: 986 AIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLD 1045
Query: 797 RSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR------- 839
S FVP+G + + + L+ I + ++ + + R
Sbjct: 1046 VDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYL 1105
Query: 840 ----RCL---------------------SSPVFGTPGG--------------SVDRKSLP 860
R L + P +G G + DR
Sbjct: 1106 GTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARDRGHFS 1165
Query: 861 SH---GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS-----D 910
+ G L + + + D+ +V A H + V I + N + P K+ +
Sbjct: 1166 DYQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLE 1225
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-------EYF 963
SS+ D+ YG+ L + KQPL+RA+ + +NLL R E S++ E + Y+
Sbjct: 1226 YSSYADYYKQKYGVELIYRKQPLIRARGVSYCKNLLSPR-FEHSDAREGDFSENLDKTYY 1284
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK ++ P A
Sbjct: 1285 VYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKDIIDYPVP------ATK 1336
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1337 ILEALTAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1396
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----------RRCPRICSKET-----ERTIHSQ 1128
+ A LQ YI+ F P ++ A G P I +E+ ++ +
Sbjct: 1397 YQYALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQKESYDD 1456
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
Y +D E S + L KT+ADVVEAL+G + G AA +KWIGI E
Sbjct: 1457 YADNMQEDGEIEGDSS-CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAEL 1515
Query: 1189 EASQVTNICISSKSF-LPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GC 1244
+ ++ K + +P S S++ TL+ +LG +F ++GLL++A H S G C
Sbjct: 1516 DPEEIP----PPKPYDIPESIMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSC 1571
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + L
Sbjct: 1572 YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1631
Query: 1305 DSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNT 1360
S+ L I +V + ++ P + PKVLGD+VES GAI LDSG++ +
Sbjct: 1632 GSSALETQIREFVKDVQEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSV 1691
Query: 1361 VWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD 1420
VWK+ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1692 VWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRAGNIATVE--------- 1742
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETP 1480
VF+ +++ ++A KL A + K E+ K
Sbjct: 1743 VFVDGVQIGVAQNPQKKMAQ-----KLAARNALVVLKEKETATKK--------------- 1782
Query: 1481 INVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTF 1540
E + E + G+ R L ++C W P +
Sbjct: 1783 -----------EDERDGEKKNGAQM---------------FTRQTLNDICLRRQWPMPQY 1816
Query: 1541 DCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLERE 1597
C E G +H K F + V V ECIGEP K A + AA +L L R+
Sbjct: 1817 RCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRD 1873
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 46/266 (17%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA-HLI 100
A+ AQ+ ++ AR+YQLE+ ++A N I +L TG GKT IAVLLI + ++
Sbjct: 250 ADRMGAAQREKPVAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKML 309
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLV 160
++ +K + +FL P V LV Y+VLV
Sbjct: 310 KENKKMLAVFLVPKVPLV-------------------------------------YQVLV 332
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFG 219
M QILL L H IKM+ I LLI DECHHA K HPY+ +M +FY K P +FG
Sbjct: 333 MTAQILLNILRHSIIKMDAIHLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPAVFG 390
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV KG ++Q + I +LE+ LD+ V +++D ++LE V P+ V QY
Sbjct: 391 MTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQY----- 445
Query: 280 DTSSSYVTCSEQLAEIKREQYISALS 305
D +++ + EQ+ +++ +ALS
Sbjct: 446 DKAATLWSLHEQIKQMESTVEEAALS 471
>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=OsDCL1
gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
sativa Japonica Group]
Length = 1883
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 394/1317 (29%), Positives = 597/1317 (45%), Gaps = 203/1317 (15%)
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN 471
LI IL ++ + + I+FV R+VTA L +L L L+ RC L+G N + M
Sbjct: 629 LIKILLKYQHTEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNN-QEMRAC 687
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+
Sbjct: 688 QMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 747
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT---------CSEERIYKVDS 582
Y +++ GN ++N E+ + +E M+RT S +Y+V+S
Sbjct: 748 YILMLERGNISHETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVES 807
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIH 637
+GA +S V L+H YCS+LP D + P+F ++ GG++ C + LP NAP
Sbjct: 808 TGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFE 867
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
++ G SS+ A++ CL A + LH++GA D LLP + + E E + + + G
Sbjct: 868 KLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDTLLP-DRGSGEGEKTEQNDEGEPLPGT 926
Query: 698 GSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFI-----PDPADRIYREF 744
E + V +LR W SQ+ ++L Y + + DP F
Sbjct: 927 ARHREFYPEGVADILRGEWILSGRDGYQNSQF-IKLYMYSVNCVNVGTSKDPFVTQLSNF 985
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK--------VILD 796
+ + L E +DL +AR LV G ++ + Q + LK ++LD
Sbjct: 986 AIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLD 1045
Query: 797 RSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR------- 839
S FVP+G + + + L+ I + ++ + + R
Sbjct: 1046 VDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYL 1105
Query: 840 ----RCL---------------------SSPVFGTPGG--------------SVDRKSLP 860
R L + P +G G + DR
Sbjct: 1106 GTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARDRGHFS 1165
Query: 861 SH---GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS-----D 910
+ G L + + + D+ +V A H + V I + N + P K+ +
Sbjct: 1166 DYQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLE 1225
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-------EYF 963
SS+ D+ YG+ L + KQPL+RA+ + +NLL R E S++ E + Y+
Sbjct: 1226 YSSYADYYKQKYGVELIYRKQPLIRARGVSYCKNLLSPR-FEHSDAREGDFSENLDKTYY 1284
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK ++ P A
Sbjct: 1285 VYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKDIIDYPVP------ATK 1336
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1337 ILEALTAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1396
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----------RRCPRICSKET-----ERTIHSQ 1128
+ A LQ YI+ F P ++ A G P I +E+ ++ +
Sbjct: 1397 YQYALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQKESYDD 1456
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
Y +D E S + L KT+ADVVEAL+G + G AA +KWIGI E
Sbjct: 1457 YADNMQEDGEIEGDSS-CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAEL 1515
Query: 1189 EASQVTNICISSKSF-LPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GC 1244
+ ++ K + +P S S++ TL+ +LG +F ++GLL++A H S G C
Sbjct: 1516 DPEEIP----PPKPYDIPESIMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSC 1571
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + L
Sbjct: 1572 YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1631
Query: 1305 DSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNT 1360
S+ L I +V + ++ P + PKVLGD+VES GAI LDSG++ +
Sbjct: 1632 GSSALETQIREFVKDVQEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSV 1691
Query: 1361 VWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD 1420
VWK+ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1692 VWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRAGNIATVE--------- 1742
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETP 1480
VF+ +++ ++A KL A + K E+ K
Sbjct: 1743 VFVDGVQIGVAQNPQKKMAQ-----KLAARNALVVLKEKETATKK--------------- 1782
Query: 1481 INVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTF 1540
E + E + G+ R L ++C W P +
Sbjct: 1783 -----------EDERDGEKKNGAQM---------------FTRQTLNDICLRRQWPMPQY 1816
Query: 1541 DCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLERE 1597
C E G +H K F + V V ECIGEP K A + AA +L L R+
Sbjct: 1817 RCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRD 1873
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 46/266 (17%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA-HLI 100
A+ AQ+ ++ AR+YQLE+ ++A N I +L TG GKT IAVLLI + ++
Sbjct: 250 ADRMGAAQREKPVAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKML 309
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLV 160
++ +K + +FL P V LV Y+VLV
Sbjct: 310 KENKKMLAVFLVPKVPLV-------------------------------------YQVLV 332
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFG 219
M QILL L H IKM+ I LLI DECHHA K HPY+ +M +FY K P +FG
Sbjct: 333 MTAQILLNILRHSIIKMDAIHLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPAVFG 390
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV KG ++Q + I +LE+ LD+ V +++D ++LE V P+ V QY
Sbjct: 391 MTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQY----- 445
Query: 280 DTSSSYVTCSEQLAEIKREQYISALS 305
D +++ + EQ+ +++ +ALS
Sbjct: 446 DKAATLWSLHEQIKQMESTVEEAALS 471
>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
Length = 1883
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 394/1317 (29%), Positives = 597/1317 (45%), Gaps = 203/1317 (15%)
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN 471
LI IL ++ + + I+FV R+VTA L +L L L+ RC L+G N + M
Sbjct: 629 LIKILLKYQHTEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNN-QEMRAC 687
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+
Sbjct: 688 QMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 747
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT---------CSEERIYKVDS 582
Y +++ GN ++N E+ + +E M+RT S +Y+V+S
Sbjct: 748 YILMLERGNISHETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVES 807
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIH 637
+GA +S V L+H YCS+LP D + P+F ++ GG++ C + LP NAP
Sbjct: 808 TGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFE 867
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
++ G SS+ A++ CL A + LH++GA D LLP + + E E + + + G
Sbjct: 868 KLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDTLLP-DRGSGEGEKTEQNDEGEPLPGT 926
Query: 698 GSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFI-----PDPADRIYREF 744
E + V +LR W SQ+ ++L Y + + D F
Sbjct: 927 ARHREFYPEGVADILRGEWILSGRDGYQNSQF-IKLYMYSVNCVNVGTSKDSFVTQLSNF 985
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK--------VILD 796
+ + L E +DL +AR LV G ++ + Q + LK ++LD
Sbjct: 986 AIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLD 1045
Query: 797 RSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR------- 839
S FVP+G + + + L+ I + ++ + + R
Sbjct: 1046 VDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLVNYIVNTDAWNNPLQRARPDVYL 1105
Query: 840 ----RCL---------------------SSPVFGTPGG--------------SVDRKSLP 860
R L + P +G G + DR
Sbjct: 1106 GTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARDRGHFS 1165
Query: 861 SH---GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS-----D 910
+ G L + + + D+ +V A H + V I + N + P K+ +
Sbjct: 1166 DYQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLE 1225
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-------EYF 963
SS+ D+ YG+ L + KQPL+RA+ + +NLL R E S++ E + Y+
Sbjct: 1226 YSSYADYYKQKYGVELIYRKQPLIRARGVSYCKNLLSPR-FEHSDAREGDFSENLDKTYY 1284
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK ++ P A
Sbjct: 1285 VYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKDIIDYPVP------ATK 1336
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1337 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1396
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----------RRCPRICSKET-----ERTIHSQ 1128
+ A LQ YI+ F P ++ A G P I +E+ ++ +
Sbjct: 1397 YQYALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQKESYDD 1456
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
Y +D E S + L KT+ADVVEAL+G + G AA +KWIGI E
Sbjct: 1457 YADNMQEDGEIEGDSS-CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAEL 1515
Query: 1189 EASQVTNICISSKSF-LPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GC 1244
+ ++ K + +P S S++ TL+ +LG +F ++GLL++A H S G C
Sbjct: 1516 DPEEIP----PPKPYDIPESIMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSC 1571
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + L
Sbjct: 1572 YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1631
Query: 1305 DSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNT 1360
S+ L I +V + ++ P + PKVLGD+VES GAI LDSG++ +
Sbjct: 1632 GSSALETQIREFVKDVQEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSV 1691
Query: 1361 VWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD 1420
VWK+ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1692 VWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRAGNIATVE--------- 1742
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETP 1480
VF+ +++ ++A KL A + K E+ K
Sbjct: 1743 VFVDGVQIGVAQNPQKKMAQ-----KLAARNALVVLKEKETATKK--------------- 1782
Query: 1481 INVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTF 1540
E + E + G+ R L ++C W P +
Sbjct: 1783 -----------EDERDGEKKNGAQM---------------FTRQTLNDICLRRQWPMPQY 1816
Query: 1541 DCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLERE 1597
C E G +H K F + V V ECIGEP K A + AA +L L R+
Sbjct: 1817 RCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRD 1873
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 46/266 (17%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA-HLI 100
A+ AQ+ ++ AR+YQLE+ ++A N I +L TG GKT IAVLLI + ++
Sbjct: 250 ADRMGAAQREKPVAEEHARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKML 309
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLV 160
++ +K + +FL P V LV Y+VLV
Sbjct: 310 KENKKMLAVFLVPKVPLV-------------------------------------YQVLV 332
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFG 219
M QILL L H IKM+ I LLI DECHHA K HPY+ +M +FY K P +FG
Sbjct: 333 MTAQILLNILRHSIIKMDAIHLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPAVFG 390
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV KG ++Q + I +LE+ LD+ V +++D ++LE V P+ V QY
Sbjct: 391 MTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQY----- 445
Query: 280 DTSSSYVTCSEQLAEIKREQYISALS 305
D +++ + EQ+ +++ +ALS
Sbjct: 446 DKAATLWSLHEQIKQMESTVEEAALS 471
>gi|297815500|ref|XP_002875633.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
gi|297321471|gb|EFH51892.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
Length = 1521
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 431/1609 (26%), Positives = 718/1609 (44%), Gaps = 205/1609 (12%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQ 121
Y+L++ + A NII LGTG K+ I +LI + K + IFLAPTV + Q
Sbjct: 36 YELKVYEVAKNRNIIAVLGTGIDKSVITKMLIKAMG--CSDTDKRLIIFLAPTVNI---Q 90
Query: 122 AKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEV-LVMIPQILLYCLYHRFIKME 178
I + KV + G G + S W++E+ +++V LVM PQILL L F+K+E
Sbjct: 91 CCEIRAQVNLKVEEYFGAKGVDKWTSQ-RWDEEVSKHDVSLVMTPQILLDALRSAFLKLE 149
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
++ LLI DECH + NHPYAK+MK F + GKG A K
Sbjct: 150 MVCLLILDECH--RTTGNHPYAKLMKIFNSEE----------------GKGVEKFA---K 188
Query: 239 SINSLENLLDAKVY-SVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKR 297
++ D + S+E E LE+ + + T +L E+++
Sbjct: 189 AVKEGPIFYDPSPFRSLELKEKLET------------------SHLKFDTSLRRLQELEK 230
Query: 298 EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYILLSGDETMRN 356
+++ + K +Q K+L+ + + CL+NLG +C L A L +T
Sbjct: 231 GSFLN-IDNKFETYQ------KRLSIDYKEILHCLDNLGLICAHLAAEVCLEKISDTKEE 283
Query: 357 ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL 416
E + + V+ ++ + + + + S KL L +L
Sbjct: 284 SETYKEWSMVCKEFLEDILSTIGVYLQQGDKNSVDLQQNRLSAVNSGHVSPKLKELFHLL 343
Query: 417 STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSI 476
+FR ++ +C++ V RI+TA + ++ L+ +LVG N + ++ I
Sbjct: 344 DSFRGEKQKQCLILVERIITAEVIERFVKKEASLSYLNVLYLVGNNLSTNASAQKTQIEI 403
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
F G++NLL T EEG + C ++ FDLP+TV S+ QS+ A+ S+ +
Sbjct: 404 PNLFHEGKVNLLFITDAVEEGFQVPNCSCMVCFDLPKTVCSYSQSQEHAKQSNSKSIMFL 463
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLL 596
+ GN ++ D + D M RE+ R + + S ++ +GV +
Sbjct: 464 ERGNPKQRDHLY------DLMRREVPIR---------DPEAPNLKSCPPPVTNAHGVKEI 508
Query: 597 HRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACL 656
GT+ +I +N + + + Q+ ++ ++ L
Sbjct: 509 --------------------------GTM--VIPDSNITVSEEAASTQTMIDPPSRNEQL 540
Query: 657 KAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW 716
+ L L++ LL + NA E S S S G R ELH L +W
Sbjct: 541 PPCKKLR----LDNNLL--QSNAKEKVASSKSKSSSSAAGSKKRKELHGTTCANALSGTW 594
Query: 717 TKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLV 776
++ Y F + + +Y F L ++S L + ++++DL+L R + V +
Sbjct: 595 GENIDGAIFQAYKFDFCCNISGEVYSSFSLLLESTLAEDVGNVEMDLYLVR-KLVKASVS 653
Query: 777 PSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTF------YL 822
P G +++ + FQ+ F + + S+ ++ ++ +S+ +L
Sbjct: 654 PCGQIRLSQEELVKGKYFQQFFFNGMFGKLFVGSKSQGTKREFLLQTDTSSLWHPSFMFL 713
Query: 823 LLPV----IFHKNSVDWKIIRRCLSSPVF----------GTPGGSVDRKS---------L 859
LLPV + ++DW I C S F + G + S +
Sbjct: 714 LLPVETKDLASSATIDWSAINSCASIVEFLKKNSLLELQVSDGNQCNTSSDQEVLLDDKM 773
Query: 860 PSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYK---DSDSSSHVD 916
+ N S ++ +E +V A H Y + V + + SP++ S+ +++ +
Sbjct: 774 EETNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVRDSSALSPFECDASSEYATYAE 833
Query: 917 HLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE---------EYFDDLP 967
+ YGI L HP QPL++ K NLL + E E + LP
Sbjct: 834 YFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKAEPKAGNVRKKKPNIHAHLP 893
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PEL L I + + S+ LLPS+MHRLE+L++A +L+ + S + +S+ +L+A
Sbjct: 894 PEL--LARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSI-DNFSISSTSILEA 950
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
+TT C E FS+ERLE+LGD+ LKY +LFL + DEG+L+R+R + ++NSNL +LA
Sbjct: 951 VTTLTCPEAFSMERLELLGDSVLKYVASCYLFLKYPDKDEGQLSRQRQSIISNSNLHRLA 1010
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGR----RCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
LQ YIR+ F+P ++ A G+ P C +T + C
Sbjct: 1011 TNRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSC 1070
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNIC--ISSK 1201
GH W K+++D EAL+GA+ G A+ +KW+G+ V+F+ + V +S +
Sbjct: 1071 DMGHRWTVSKSVSDCAEALIGAYYVSGGLTASLHMMKWLGVNVDFDPNLVVEAISRVSLR 1130
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLIT 1261
++P L LE + H+F + LL +A H S + Y+RLEFLGD+VLD+LIT
Sbjct: 1131 CYIPKDDEL--TELERKIQHEFSAKFLLKEAITHSSVHE-SYSYERLEFLGDSVLDFLIT 1187
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+L++ Y + PG++TDLRS VNN+ FA VAV + + L + VL IN Y+
Sbjct: 1188 RHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHIHLQRCATVLENQINEYLMSFQ 1247
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLN 1381
P T + PK LGD+VES GA+L+D+ +L+ VW++ L P++ LQL
Sbjct: 1248 KPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLP 1307
Query: 1382 PIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQ 1441
P REL ELC+S + G K A+A + + DV ++ + + K A+ A+
Sbjct: 1308 PYRELNELCDSLGYFFREKCSNDGVK--AQATIHLQLGDVLLTGDGSEQTNKLALGKAAS 1365
Query: 1442 QLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKIS---E 1498
L ++L+ K IG +++ ++V A ++ + S E
Sbjct: 1366 HLLTQLEKRNISRKIS----------------IGDNQSSMDVNLACNHSDRETPTSDSIE 1409
Query: 1499 PQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLF---- 1554
Q IG + GG R L+E C + W PTFD +E+ + +
Sbjct: 1410 IQSIVIPVIGPINTKKGG-----PRGTLHEFCKKHLWPTPTFDTSEEKSRTPFEFTDGDE 1464
Query: 1555 ------TFRVIVEIEAPEK-IIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
+F + + P + + GE + KK + + A +L+ LER
Sbjct: 1465 KRTSFSSFTSTITLRIPNRGAVMYAGEARPDKKSSFDSAVVELLYELER 1513
>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1944
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 354/1145 (30%), Positives = 545/1145 (47%), Gaps = 151/1145 (13%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + + I+FV R+V+A L + L L+ +C L+G N
Sbjct: 689 TPKVQALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNS- 747
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 748 QEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 807
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------SSDAFTCSEER--- 576
R P S+Y +V+ N ++N E+ + +E ++RT + + R
Sbjct: 808 RKPGSDYILMVERDNLSHEAFLRNAKNSEETLRKEAIERTDLSHLKDTSRLISVDTRPGT 867
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
+Y+V S+GA +S V L+H YCS+LP D + +P+F + GG C + LP
Sbjct: 868 VYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 927
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP + G SSM A++ CL A + LH++GA D LLP + + E E + +
Sbjct: 928 CNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEREKDEQTDEG 987
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI------------PDPADR 739
D G E + V +L+ W S+ N+ + DP
Sbjct: 988 DPLPGTARHREFYPEGVADILKGEWILSEKDACNNYKLLHLYMYAVKCENLGHSKDPFLT 1047
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE 799
F + + L E + +DL +AR + LV SG++ + Q LK
Sbjct: 1048 QVSNFAVLFGNELDAEVLSMSMDLFIARTVTTKASLVFSGLINITESQLASLK------S 1101
Query: 800 FNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHK-----NSVDWKIIRRCLSSPVFGT 849
F+ + + D E S++ + YL +P++ K N +DW ++ + + +
Sbjct: 1102 FHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSVDPMNQIDWHLVETIIGADAWKN 1161
Query: 850 P-------------------------------GGSVDRKSLPSHG--------------- 863
P G + +KS P++G
Sbjct: 1162 PLQKARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASG 1221
Query: 864 --------------------PLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGY 903
L + + ++ D+ +V A H + V +I ++ +
Sbjct: 1222 LVPNRDAMQTQKHINMTTNGKLMMADICTNAEDLVGRIVTAAHSGKRFYVDSICYDMSAE 1281
Query: 904 S--PYKDS-----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLEDSE 955
+ P K+ + SS+ D+ YG++L + +QPL+R + + +NLL R + + E
Sbjct: 1282 NSFPRKEGYLGPLEYSSYADYYKQKYGVNLIYKQQPLIRGRGVSYCKNLLSPRFEHSEGE 1341
Query: 956 SHELEE--YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
S E+ + Y+ LPPELC + + S G+ LPSIM R+E++L+A++LK+++ ++
Sbjct: 1342 SEEIHDKTYYVFLPPELCLVHPLPGSLVRGA--QRLPSIMRRVESMLLAVQLKNMI--NY 1397
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
P V A +L ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR
Sbjct: 1398 P----VLASKILGALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1453
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG--------RRCPRICSKETERTI 1125
R V+N L + A LQ YI+ F P ++ A G + + ER+I
Sbjct: 1454 RQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLFDQERSI 1513
Query: 1126 HS------QYDGRAPDDLNAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
+G + + E+ S + L KT+ADVVEAL+G + + G AA
Sbjct: 1514 SKIERMDCHTNGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHL 1573
Query: 1179 LKWIGIQVEFEASQVTNICISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHP 1236
+KWIGIQ+EF+ T C +P S S+D LE L +F RGLL+++ H
Sbjct: 1574 MKWIGIQIEFDPD--TMECTKKPFNVPDSILRSVDFDALEGALNMKFNDRGLLVESITHA 1631
Query: 1237 SFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
S G CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV
Sbjct: 1632 SRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVK 1691
Query: 1296 QSFYKFLIFDSNVLSETINNYVD----YMITPSSTREVKEGPRCPKVLGDLVESSLGAIL 1351
+ + L S+ L + I +V + P + PKVLGD+VES GAI
Sbjct: 1692 HNLHVHLRHGSSALEKQIKEFVKEVQVELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIF 1751
Query: 1352 LDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAE 1411
LDSG + VWK+ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1752 LDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRIGNLATVE 1811
Query: 1412 AKVTG 1416
+ G
Sbjct: 1812 VFIDG 1816
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 147/247 (59%), Gaps = 10/247 (4%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS-ICIFLAP 113
P++ AR+YQL++ +++ +N I +L TG GKT IAVLLI + ++K K + +FL P
Sbjct: 284 PEEKARQYQLDVLEQSKRKNTIAFLETGAGKTLIAVLLIKSIQDSLQKQNKKMLAVFLVP 343
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+VI E G++V +CG + W++E D VLVM QILL L H
Sbjct: 344 KVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRH 403
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGAS 231
IKME I LLI DECHHA K HPY+ +M +FY + P +FGMTASPV KG S
Sbjct: 404 SIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKENRPSVFGMTASPVNLKGVS 461
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+Q + I +LE+ LD+ V +++D ++LE V P V +Y D ++S EQ
Sbjct: 462 SQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEY-----DKAASLCYLHEQ 516
Query: 292 LAEIKRE 298
+ +++ E
Sbjct: 517 IKQMEVE 523
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 1522 ARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKG 1581
R L ++C W P + C E G +H K FTF V V EC+GEP K
Sbjct: 1867 TRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKK 1926
Query: 1582 AAEHAA 1587
A + AA
Sbjct: 1927 AKDSAA 1932
>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1942
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 357/1142 (31%), Positives = 547/1142 (47%), Gaps = 145/1142 (12%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + + I+FV R+V+A L + L L+ +C L+G N
Sbjct: 687 TPKVQALIKILLKYQHTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNS- 745
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 746 QEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 805
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS------SDAFTCSEER--- 576
R P S+Y +V+ N ++N E+ + +E ++RT + + R
Sbjct: 806 RKPGSDYILMVERDNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDTRPGT 865
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
+Y+V S+GA +S V L+H YCS+LP D + +P+F + GG C + LP
Sbjct: 866 VYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 925
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP + G SSM A++ CL A + LH++GA D LLP + + E E + +
Sbjct: 926 CNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGGEKEKDEQTDEG 985
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPV----RLNFYFMQFIP--------DPADR 739
D G E + V +L+ W S +L +M + DP
Sbjct: 986 DPLPGTARHREFYPEGVADILKGEWILSGKDACNNSKLLHLYMYAVKCENLGHSKDPFLT 1045
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK------- 792
F + + L E + +DL +AR + + LV G++ + Q LK
Sbjct: 1046 QVSNFAVLFGNELDAEVLSMSMDLFIARTVTTKSSLVFRGLISITESQLASLKSFHVRLM 1105
Query: 793 -VILDRSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWK----- 836
++LD S FVP+ D + ++ + L+ I ++ WK
Sbjct: 1106 SIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSVDPTNQIDWHLVETIIGADA--WKNPLQK 1163
Query: 837 --------IIRRCL---------------------SSPVFGTPG-----------GSVDR 856
R L S P +G G G V
Sbjct: 1164 ARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPN 1223
Query: 857 K---------SLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--P 905
+ ++ ++G L + + ++ D+ +V A H + V +I ++ + + P
Sbjct: 1224 RDAMQTQKHINMTTNGKLMMADTCTNAEDLIGKIVTAAHSGKRFYVDSIRYDMSAENSFP 1283
Query: 906 YKDS-----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR----KLEDSES 956
K+ + SS+ D+ YG+ L + +QPL+R + + +NLL R + E E+
Sbjct: 1284 RKEGYLGPLEYSSYADYYKQKYGVDLIYRQQPLIRGRGVSYCKNLLSPRFEHSEGESEET 1343
Query: 957 HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
H+ + Y+ LPPELC + + S G+ LPSIM R+E++L+A++LK++++ +P
Sbjct: 1344 HD-KTYYVFLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKNMIN--YP-- 1396
Query: 1017 AEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
V A +L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R
Sbjct: 1397 --VQASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1454
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG--------RRCPRICSKETERTIHS- 1127
V+N L + A LQ YI+ F P ++ A G + + ER+I
Sbjct: 1455 MVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLFDQERSISKI 1514
Query: 1128 -----QYDGRAPDDLNAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKW 1181
DG + + E+ S + L KT+ADVVEAL+G + + G AA +KW
Sbjct: 1515 ERMDCHTDGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKW 1574
Query: 1182 IGIQVEFEASQVTNICISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFN 1239
+GIQ+EF+ T C +P S S+D LE L +F RGLL+++ H S
Sbjct: 1575 MGIQIEFDPD--TMDCTRKPFNVPDSILRSVDFDALEGALNMKFKDRGLLVESITHASRP 1632
Query: 1240 RLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
G CYQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV +
Sbjct: 1633 SSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHNL 1692
Query: 1299 YKFLIFDSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDS 1354
+ L S+ L + I +V D + P + PKVLGD++ES GAI LDS
Sbjct: 1693 HVHLRHGSSALEKQIKEFVKEVQDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDS 1752
Query: 1355 GFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKV 1414
G + VWK+ L P++ L ++P+REL E C L++ + + G E +
Sbjct: 1753 GRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRIGNLATVEVFI 1812
Query: 1415 TG 1416
G
Sbjct: 1813 DG 1814
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 10/247 (4%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKSICIFLAP 113
P++ AR+YQL++ ++A +N I +L TG GKT IAVLLI + L ++ +K + +FL P
Sbjct: 282 PEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLHKQNKKMLAVFLVP 341
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+VI E G++V +CG + W++E D VLVM QILL L H
Sbjct: 342 KVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRH 401
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGAS 231
IKME I LLI DECHHA K HPY+ +M +FY + P +FGMTASPV KG S
Sbjct: 402 SIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKENRPSVFGMTASPVNLKGVS 459
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+Q + I +LE+ LD+ V +++D ++LE V P V +Y D ++S EQ
Sbjct: 460 SQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEVVVEY-----DKAASLCYLHEQ 514
Query: 292 LAEIKRE 298
+ +++ E
Sbjct: 515 IKQMEVE 521
Score = 47.0 bits (110), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 1522 ARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKG 1581
R L ++C W P + C E G +H K FTF V V EC+GEP K
Sbjct: 1865 TRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKK 1924
Query: 1582 AAEHAA 1587
A + AA
Sbjct: 1925 AKDSAA 1930
>gi|413918887|gb|AFW58819.1| hypothetical protein ZEAMMB73_957371 [Zea mays]
Length = 511
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/512 (49%), Positives = 335/512 (65%), Gaps = 17/512 (3%)
Query: 425 MKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGE 484
MKCIVFV RI+ AR + ILQNLK L WRC FLVG ++GL++MSR+ M SI+EKF SGE
Sbjct: 1 MKCIVFVKRIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGE 60
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
+NLLVAT VGEEGLDIQTCCLV+RFDLPETV SFIQSRGRARM +S+Y FL++ GN +
Sbjct: 61 VNLLVATSVGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQE 120
Query: 545 DLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLP 604
L+ ++ E M++EI RTS+D F C EE IY+V+ +GA IS VSLLHRYC LP
Sbjct: 121 KLLDDYITGEIIMDKEINLRTSNDMFNCLEENIYRVNDTGASISTACSVSLLHRYCDNLP 180
Query: 605 HDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHK 664
D FF P P F++ DD+ G +C +ILP NA Q+ G P S + AK+DACLKA LH+
Sbjct: 181 RDIFFVPSPSFFFVDDVDGIVCKLILPPNAAFRQVNGQPCPSKDEAKRDACLKACIKLHE 240
Query: 665 LGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVR 724
LGAL D+LLP + + +S+S+ + E R EL+EML+PAVLR S K +
Sbjct: 241 LGALTDFLLPGQGSRKIKVSTTNNSESNKDDDESFREELYEMLIPAVLRPSRCKLDSSFK 300
Query: 725 LNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG----- 779
L+FY+++FIP PADR Y+ FGLFV + LP E+E L V+LHLAR R V + G
Sbjct: 301 LHFYYIEFIPIPADRRYQMFGLFVINRLPEESEKLDVELHLARARIVKAGIKYLGKIEFN 360
Query: 780 ---IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV---IFHKNSV 833
++ A FQEMFLKV+LDRSEF ++ LG D + STFYLLLP+ + N +
Sbjct: 361 KEEMILAHNFQEMFLKVLLDRSEFTPSYILLGNDGALD-MDSTFYLLLPIKQKFYGDNMI 419
Query: 834 DWKIIRRCLSSPVFGTPGG-SVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYL 892
DW ++RCLSSP F P G S+ LP+ L+L G +++DV SLVY H F+
Sbjct: 420 DWPAVKRCLSSPAFQDPMGLSLHDSYLPNES-LKLLGGTYNKADVIGSLVYTPHTDLFFF 478
Query: 893 VTNIVFEKNGYSPYKDSDSSSHVDHLISSYGI 924
V I+ +G + + + +++ +H +G+
Sbjct: 479 VDAIL---DGTNAKSELNGATYAEHFKQRHGV 507
>gi|41469333|gb|AAS07189.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 1017
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 338/1063 (31%), Positives = 524/1063 (49%), Gaps = 92/1063 (8%)
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRS 482
Q ++CIVFV R++T+ L ++L ++ ++ W + G GL S SR I+E FR
Sbjct: 3 QDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRK 62
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
G++++++AT++ EEGLD+ +C LVIRFD TV SFIQSRGRARM S+Y LV G+
Sbjct: 63 GKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGDVE 122
Query: 543 ELDLIKNFSKEEDRMNREIMDRTSSDA----FTCSEERIYKVDSSGACISAGYGVSLLHR 598
+ F M E + S T E+ Y+V+S+ A ++ V L+H
Sbjct: 123 AQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLIHF 182
Query: 599 YCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
+CSKLP DE+FNP P+F D GT C + LP ++P+ + + S+ K+ CLKA
Sbjct: 183 FCSKLPSDEYFNPLPRFD-IDKASGT-CTLHLPKSSPVQTVNVEGEGSI--LKETVCLKA 238
Query: 659 IEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTK 718
++LH +GAL D LLP+ D ++EP + + P +W
Sbjct: 239 CQELHAIGALTDSLLPELDVPCDEEPDIVVENKIE----------QPSYFPEEFVDNWRS 288
Query: 719 SQYPVRLNFYF-----MQFIPDPADRIYREFGL-------FVKS--LLPGEAEHLKVDLH 764
RL Y+ ++ P A L F S LPG ++ V +
Sbjct: 289 FS---RLGIYYCYKISLEGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMK 345
Query: 765 LARGRSVMTKLVPSGIMQAQQFQEMFLKVIL--DRSE-------FNSEFVPLGKDDYCES 815
+ L ++ A++FQ L ++ D E F+ VP+G
Sbjct: 346 YVG----IIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIG------- 394
Query: 816 SSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDR-KSLPSHGPLQLHNGWSSE 874
YLLLP++ +DW ++ SSP++ + S LQ +G
Sbjct: 395 ---VVYLLLPLV--SGRIDWCSMKFS-SSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCR 448
Query: 875 SDVENSLVYATHKKWFYLVTNIV-FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPL 933
++NS+V H FY+++ + + N P D ++ D+ + +G+ L QPL
Sbjct: 449 CILKNSIVCTPHNNIFYVISGFLDLDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPL 508
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIM 993
L ++RN LHN E + Y +LPPELC++ + S + S +PSIM
Sbjct: 509 LAGSKHVKVRNFLHN-CYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIM 567
Query: 994 HRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYA 1053
R++ +L++++LK L + + +V +L+ALTT+KCQE FS E LE LGD+FLKY
Sbjct: 568 FRIQCMLLSVKLKVQLGPTVQQ-FDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYV 626
Query: 1054 VGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC 1113
RHLF + EG LT+ + N ++N+ L +LA +NL YI + F+P +
Sbjct: 627 TTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWII----- 681
Query: 1114 PRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFK 1173
C ER + + AP+ + ++ + S + K IAD VEAL+GA++ +G K
Sbjct: 682 --PCLDYDERD-NKKISFLAPNGMYSQRKMS-----IKSKRIADSVEALIGAYLSTAGEK 733
Query: 1174 AATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAF 1233
AA +K +G+ +EF T I + K + +++ +LE +LG++F LLL+A
Sbjct: 734 AAFLLMKSLGMNIEFH----TEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEAL 789
Query: 1234 VHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S+ G CYQRLEFLGDA+LD+L T Y YS YP P LTDLRS VNN +A+
Sbjct: 790 THGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAH 849
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVD----YMITPSSTREVKEGPRCPKVLGDLVESSL 1347
AV K ++ S+ L ++ Y++ PS E G PKVLGD++ES
Sbjct: 850 AAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIG--LPKVLGDVIESIA 907
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK 1407
GAI LDS + VW+ M L+P+ ++ +P++ L E C+ + + G
Sbjct: 908 GAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGV 967
Query: 1408 FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAA 1450
A+V K + SA + + A ++AS+ + L A
Sbjct: 968 SSVIARV--KAGETTYSATKSGPCKLVAKKLASKAVLKDLIAG 1008
>gi|296089027|emb|CBI38730.3| unnamed protein product [Vitis vinifera]
Length = 1474
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 366/1230 (29%), Positives = 569/1230 (46%), Gaps = 203/1230 (16%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A + N I +L TG GKT IAVLLI + + L + +K + +FL P V L
Sbjct: 253 ARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVPKVPL 312
Query: 118 VQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V QQA+VI E G++V +CG + W++E + VLVM QILL L H IK
Sbjct: 313 VYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQILLNILRHSIIK 372
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQAN 235
ME I LLI DECHHA K HPY+ +M +FY K P +FGMTASPV KG S+Q +
Sbjct: 373 MEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVD 430
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
I +LE+ LD+ V +++D ++LE V P V +Y D +++ + EQ+ ++
Sbjct: 431 CAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEY-----DKAATLWSLHEQIKQM 485
Query: 296 ------------KREQYISALSRKLHDHQSLRNTTKQLNRLHD-----------SMKFCL 332
+R ++ +R + LR R ++ + L
Sbjct: 486 ELAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 545
Query: 333 ENLGVCGALHASYILLSG---DETMRNEL-IEAEGNTIDDSLCRFASQASEVFAAICRRD 388
LG A + L+ DE +L ++ + + ++ + Q SE A+ +D
Sbjct: 546 GELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSE--GAVSDKD 603
Query: 389 --------GIASDLSCIEVLKEPFF-------------------------SKKLLRLIGI 415
++ D S IE ++E + K+ L+ I
Sbjct: 604 KKVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKI 663
Query: 416 LSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKS 475
L ++ + + I+FV R+V A L + L L+ +C L+G N + M M+
Sbjct: 664 LLKYQQTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNS-QEMRTCQMQD 722
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+ KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y +
Sbjct: 723 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 782
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD---------AFTCSEERIYKVDSSGAC 586
V+ GN ++N E+ + +E ++RT + + +Y+V+S+GA
Sbjct: 783 VERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVESTGAI 842
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIHQIVG 641
+S V L+H YCS+LP D + +P+F + GG C + LP NAP ++ G
Sbjct: 843 VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG 902
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRG 701
SSM A++ CL A + LH++GA D LLP + + E E + + + D G
Sbjct: 903 PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHR 962
Query: 702 ELHEMLVPAVLRQSWT-------KSQYPVRLNFYFMQFI-----PDPADRIYREFGLFVK 749
E + V VL+ W S V L Y ++ + DP +F +
Sbjct: 963 EFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFG 1022
Query: 750 SLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGK 809
+ L E + +DL +AR LV G + + Q LK F+ + +
Sbjct: 1023 NELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLK------SFHVRLMSIVL 1076
Query: 810 DDYCESSSSTF-----YLLLPVIFHKN-----SVDWKIIRRCLSSPVFGTP--------- 850
D E S++ + YL +PV+ K+ +DW I+ R + + + P
Sbjct: 1077 DVDVEPSTTPWDPAKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNPLQRARPDVY 1136
Query: 851 ----------------------GGSVDRKSLPSHG------------------------- 863
G + +KS P++G
Sbjct: 1137 LGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGLVPNRETIEM 1196
Query: 864 ---------PLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS--- 909
L + +S D+ +V A H + V ++ ++ + P K+
Sbjct: 1197 MKGEDLTKGKLMMAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLG 1256
Query: 910 --DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE------ 961
+ SS+ D+ YG+ L + +QPL+R + + +NLL R E SE+HE E
Sbjct: 1257 PLEYSSYADYYRQKYGVELIYKQQPLIRGRGVSYCKNLLSPR-FEHSEAHEGESDETLDK 1315
Query: 962 -YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
Y+ LPPELC + + S + S LPSIM R+E++L+A++LK +++ P
Sbjct: 1316 TYYVFLPPELCFVHPLPGS--LVRSAQRLPSIMRRVESMLLAVQLKDVINYPVP------ 1367
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
A +L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N
Sbjct: 1368 AAKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1427
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALG 1110
L + A LQ YI+ F P ++ A G
Sbjct: 1428 MVLYQSALCKGLQSYIQADRFAPSRWAAPG 1457
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
CY+R E LGDA L ++++ +L+ YP+ GQLT +R +V+N A+ + ++
Sbjct: 1385 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQ 1444
Query: 1304 FD 1305
D
Sbjct: 1445 AD 1446
>gi|78099743|gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
Length = 1116
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 342/1089 (31%), Positives = 518/1089 (47%), Gaps = 107/1089 (9%)
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIH 637
Y+V S+GA I+A V+L+ +YC KLP D +F PKP F + G C + LP NA
Sbjct: 47 YQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQ 106
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM---LFSSDSDSY 694
IVG SS +K+ L+A + LH+LG LND+L+P +EPM ++D
Sbjct: 107 SIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-----LTEEPMDTDFTTADEKCI 161
Query: 695 EGEGS--RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLL 752
G G+ R ELH L +W + LN Y + F+ D Y F L ++ L
Sbjct: 162 SGPGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPEL 221
Query: 753 PGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR------- 797
+ K+DL L + V T + P G +Q + FQE F I R
Sbjct: 222 DDDVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRK 281
Query: 798 SEFNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPVFGTPGG 852
S +F+ K + ++ + YLLLP+ I S+ W+ I C +
Sbjct: 282 SGAQRDFI-FKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSY 340
Query: 853 SVDRKSLPSHGPLQLHNGWSSE-----------SDVENSLVYATHKKWFYLVTNIVFEKN 901
D +P + Q +G E S +++S+V + H Y V +++ +
Sbjct: 341 QGDENVIPVNCIPQKRSGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTT 400
Query: 902 GYSPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLEDS 954
+ K S +S VD+ YGI ++HP+QPLL K NLL ++ K D
Sbjct: 401 AEDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDG 460
Query: 955 ES-----HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
+ E E+ +PPEL L + + DI S LLPS++HRL++L++A +L+ +
Sbjct: 461 STGKPLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREI 518
Query: 1010 SASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
+ + ++L+A+TT +C E FSLERLE+LGD+ LKY VG LFL + EG+
Sbjct: 519 GYN----QHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQ 574
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERT- 1124
L+ RS AV N+ L K +LQ Y+RD FDP ++ A G R P C ET
Sbjct: 575 LSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVP 634
Query: 1125 IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
H +Y P + + C +GH W+ KTI+D VEALVGA+ G AA ++W GI
Sbjct: 635 SHRRYIRDDPSFVVGK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGI 693
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG- 1243
++ + + + ++ LS D+ LE L + F +GLLL+A HPS LG
Sbjct: 694 DIKCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVD 753
Query: 1244 -CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
CYQRLEFLGD+VLD L+T +LY+ + + PG+LTDLRS LV+N+ FA V + + L
Sbjct: 754 YCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHL 813
Query: 1303 IFDSNVLSETINNYV-DYMITPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLN 1359
S +L I YV + E + C PKVLGD++ES GA+ LD+ FN++
Sbjct: 814 QHGSGILLGQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFLDTDFNVD 873
Query: 1360 TVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDK 1419
VW+I L P++ L L P RELLELC+ L KG + +++ + +
Sbjct: 874 MVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSECTSKGEVII---EMSLQLR 930
Query: 1420 DVFISACATNLSRKEAIRIASQQLFSKLKAAGY-----VPKTKSLE---SILKSSPKSEA 1471
D + A + ++K A A+ ++ + LK G + K K L+ S L+ S
Sbjct: 931 DELLVAQGHDRNKKRAKAKAASRILADLKQQGLSIKQCLSKAKQLDIVTSDLQFDLTSSG 990
Query: 1472 RLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCA 1531
+ Y + D ++ E L + + ++ RS L++LC
Sbjct: 991 TQLSYSD------LNDYHILEGLS----------SVKKEVVLPLKMEKGGPRSALFKLCK 1034
Query: 1532 ANCWKPPTFDCCKE--------EGLSHLKLFTFRVIVEIEAPE-KIIECIGEPQAKKKGA 1582
W P F+ ++ +G + +F + + P+ I GE + KK A
Sbjct: 1035 ILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITLHIPDATTITFQGERRTDKKSA 1094
Query: 1583 AEHAAEGML 1591
+ A+ ML
Sbjct: 1095 QDSASLMML 1103
>gi|357131511|ref|XP_003567380.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1183
Score = 402 bits (1032), Expect = e-108, Method: Compositional matrix adjust.
Identities = 337/1110 (30%), Positives = 515/1110 (46%), Gaps = 134/1110 (12%)
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
+ ++GA + + +S++ YC KLP D++ +P F + G +C + LP++ + +
Sbjct: 114 IGTAGATVDSS--ISIISEYCDKLPKDKYHTTRPSFEFTHHDDGFVCTLTLPSSDVLPPL 171
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSD---SYEG 696
G S + AK+ CL A + L LG +D L P + ++ P+ + + S G
Sbjct: 172 EGPKARSKQKAKQLVCLDACKQLDLLGVHDDCLCP----SLKEPPVEIVNKASVLTSNAG 227
Query: 697 EGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEA 756
R ELH +W + ++L Y + F D + Y EF L + + + EA
Sbjct: 228 VQKRKELHGTTRACAFSGTWASKRTVIKLQGYKLNFSCDQVGQKYSEFVLLIDTTIANEA 287
Query: 757 EHLKVDLHLARGRSVMTKLVPSGIM-------------QAQQFQEMFLKVILDRSEFNS- 802
+L ++L+L + V + P G++ QA F +F K+ NS
Sbjct: 288 ANLDINLYL-HDKMVKASVSPCGLLELDVQQMEQVKLFQALIFNGLFGKLFTGSKSSNSS 346
Query: 803 -EFVPLGKDDYCESSSSTFYLLLPVIFHKNS-----VDWKIIRRCLSSPVFGTPGGSVDR 856
EF+ L KDD +++ YLLLP+ S ++W++I ++ S +
Sbjct: 347 REFI-LNKDDNLIWNNANMYLLLPMDPTLESHDSFCINWRVIDEAATAVRLMRKIHSDGK 405
Query: 857 KSLPS-------HGPL-QLHNGWSSESDVENSLVYATHKKWFY-------LVTNIVFEKN 901
+L + +G L L N + N V A H Y L N F+
Sbjct: 406 MNLLAILDFDQIYGDLIHLANTSCEVHTLRNVAVLAVHTGKIYTALHVTDLSANSTFD-- 463
Query: 902 GYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE 961
G S K+S + ++ Y I L+HP QPLL KP NLL + K+ D E
Sbjct: 464 GVSSKKESGFKTFTEYFEKKYDIVLRHPSQPLLVLKPSHNPHNLL-SSKIRDEGPCYGEN 522
Query: 962 YFDD------------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
D +PPEL L + +DI + L PS+M+R+E L++A +L+
Sbjct: 523 KNDGTTDVIKVNNRVHMPPEL--LIPLNLPEDILRAFYLFPSLMYRMETLMLASQLR--- 577
Query: 1010 SASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
+ + +S+ ++L+A+TT +C E FS+ERLE+LGD+ LKYAV HLFL EG+
Sbjct: 578 -SEIAYDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPDKHEGQ 636
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI----CSKETERTI 1125
L+ R + ++N+ L +L ++ +Q YIRD FDP ++ A G+R R C + E
Sbjct: 637 LSSSRIDIISNAALHRLGIKHKIQGYIRDAAFDPRRWLAPGQRTNRPFHCKCPVDYEVVT 696
Query: 1126 HSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ 1185
+ + C KGH W+ KTI+D VEA++GA+ G +AA A L+W+G+
Sbjct: 697 KDIHVIDEKPTIKIGQACDKGHRWMCSKTISDCVEAIIGAYYVGGGLRAAVAVLRWLGVD 756
Query: 1186 VEFEASQVTNICISS--KSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLG 1242
E E + +S+ K+++P +D+ LE LG+ F +GLLL+A HPS
Sbjct: 757 AEIEEELIMQTILSASMKTYVP---KIDLVEALEAKLGYAFSVKGLLLEALTHPSHQESE 813
Query: 1243 G--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYK 1300
Y+RLEFLGDA LD L+T +L+S + G+LTDLRS VNN+ FA VAV +
Sbjct: 814 ERYSYERLEFLGDAALDILLTWHLFSSHKDTDEGELTDLRSASVNNENFAKVAVKHKLHH 873
Query: 1301 FLIFDSNVLSETINNYVDYMITPSSTREVK---EGP-RCPKVLGDLVESSLGAILLDSGF 1356
FL S +L + I Y + + SS E+ + P R PKVLGD+VES GAIL+D+
Sbjct: 874 FLQQSSGILLDQITEYANSLEN-SSMDEINLSSDAPLRGPKVLGDIVESIAGAILIDTKL 932
Query: 1357 NLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTG 1416
+L+ V + L PI+ NL+L P RELLE CN K G FL K T
Sbjct: 933 DLDVVRGVFKPLLSPIVTPENLELPPFRELLEWCN------------KNGYFLG-IKCTD 979
Query: 1417 KDK----------DVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSS 1466
DK DV + ++K+A A+ L L+ G++ I K++
Sbjct: 980 GDKIQAILDVQLEDVLVIRRGFGKNKKDAKAHAASMLLKDLEEKGFI--------ISKNA 1031
Query: 1467 PKSE--ARLIGYDETPINVV-AADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSAR 1523
++E + G + + N+ A D V +E G + P R
Sbjct: 1032 IRTEQFQKQCGSENSCYNMFDAMDTQVLTPFWGNESAGPV---LDKPVHVAVKTSKGGPR 1088
Query: 1524 SRLYELCAANCWKPPTFD--------CCKEEGLSHLKLFT----FRVIVEIEAPEK-IIE 1570
LYE C W P FD C G S +K F + + P +I
Sbjct: 1089 VALYEFCKKLQWPAPKFDSVKVLPSSACPPSGGSSVKATPTQEFFASTITLHMPNSDVIS 1148
Query: 1571 CIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
G+ A KK + + AA ML L+R G L
Sbjct: 1149 LTGDGFADKKSSQDSAALLMLHELQRRGRL 1178
>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
Length = 1529
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 383/1455 (26%), Positives = 633/1455 (43%), Gaps = 221/1455 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-------QKSICIFLA 112
R+YQ E+ KKA+ EN I L TG GKT IAV+LI + L R+ ++ + FL
Sbjct: 40 REYQYEIFKKAVSENTIAVLDTGAGKTLIAVMLIKHMLALEREKLQANRDYRRKVTFFLV 99
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLY 171
V LV QQA VI + +V+ CG D W + D ++ V+ QI L L
Sbjct: 100 DRVHLVFQQASVIRANCDAQVKELCGDMNVDAWKADTWTEIWDNNDICVLTAQIFLDNLR 159
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-------PDIMKVPRIFGMTASP 224
F+ ++ + +++FDECHHA HP+ IM +FY + P+IFGMTASP
Sbjct: 160 SGFLTLDRVNIMVFDECHHA--SKGHPFNLIMIEFYHRIYDNPVNQALDKPKIFGMTASP 217
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPV-VRVYQYGPVINDTSS 283
+ ++ + +SI++LE L + VY+ + ++L S V P ++ VIND
Sbjct: 218 I----HTSSKKVLESISTLETSLQSIVYTAKSTQELASAVKKPFETELFYSMDVINDVPP 273
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG--VCGAL 341
S V + I+RE+Y ++ L ++ N + +++ + NLG L
Sbjct: 274 SPVHAARDY--IRRERYQRSILTTLITNKI--NQVTGFQQCLNAIIYISNNLGPWCSDRL 329
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
S + + + + + + + + +A E+ +I + DL+
Sbjct: 330 WKSILYKANTKGLFTPTLYTPEQKLSNEDQQLLQEAYEL-CSITDNNTTEPDLT-----N 383
Query: 402 EPFFSKKLLRLIG----ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK-FLASWRCH 456
E F+ K L+ IL+ +Q I+FV+R TA A+ +++++ F RC
Sbjct: 384 ERQFTPKARVLVDCLKDILANDANKQGFCGIIFVDRRHTAVAIKILIESISVFKEDIRCD 443
Query: 457 FLVGVNAGLKS-----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
L+G G+KS M ++ KFR+GELNLL+AT V EEGLDIQ C VIRFDL
Sbjct: 444 VLIG--HGVKSGGDLQMKYTKQNEVIAKFRAGELNLLIATNVAEEGLDIQACNYVIRFDL 501
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM-----------NRE 560
+TV ++IQSRGRAR S+Y +++ N +++ L++N + E+ M N
Sbjct: 502 FKTVIAYIQSRGRARRKDSKYILMLNRQNLKDMSLLRNVVRAEEMMKDYCRMLPKDRNPA 561
Query: 561 IM--DRTSSDAFTCSEERI------------YKVDSSGACISAGYGVSLLHRYCSKLPHD 606
+M D + S E I + ++S+GA ++ ++L++ YC+ LP D
Sbjct: 562 VMFDDASGSPGTEYHPEYIKQGLSDKYLQDAFCIESTGALLTRSNAIALIYHYCATLPSD 621
Query: 607 EFFNPKPKFYYFD--DLGGTI------------------------CHIILPANAPIHQIV 640
F N KP + Y D + G ++ C + LP NA I Q
Sbjct: 622 NFCNFKPVYEYEDLTNYGLSLEEIEALDLPSINPTTVAGKKNIFGCTLTLPINARIQQFR 681
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSR 700
++ + AK L+A L+K G ++ +L+P+ L D+ + GSR
Sbjct: 682 AYDRAK-DDAKARVSLQACVALYKAGDIDSHLVPKSKTQRRVLMDLAEEKDDNGKLIGSR 740
Query: 701 GE--LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIP-DPADR-----IYREFGLFVKSLL 752
G L++ P + RL Y++ I D + + YR L K L
Sbjct: 741 GRENLYKKKQPLFWQGDDLVDGTDARLGPYWISLIGIDLSAQQQQLPPYRPMCLITKKPL 800
Query: 753 PG------EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
P + +HL ++ + + ++ FLK I +++
Sbjct: 801 PAIPSITLYNNNKPFQVHLTSQSEALSFNKQTQVDDLMEYTFSFLKCITNKT-------- 852
Query: 807 LGKDDYCESSSSTFYLLLPVIFHKNS------VDWKIIRRCLSSPVFGTPGGSVDRKSLP 860
+ + ++ YL+ P+I + +DW I + ++
Sbjct: 853 -----FTCAKNNIEYLVAPLIISDTAAQQTAKIDWVEITKSIAD---------------- 891
Query: 861 SHGPLQLH-NGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSH----- 914
+ P+ LH NG V+ S KK Y V ++ + SP D+ S+S+
Sbjct: 892 KYLPVNLHSNGILDTILVDTS----DQKKRQYFVQSVQHDMTPLSPVPDAVSTSNGLAKK 947
Query: 915 -VDHLISSYGIHLKH----PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP-- 967
+H +++ + + K+ A+PL ++ + N+ + + D P
Sbjct: 948 LREHGYATFKDYYEDQEFLSKKITDMAQPLIQVHRVPKNQSFRQVRGSSMMKKRDREPES 1007
Query: 968 ------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
PELC I S + +L L+P IM ++ +L+ + K L S +
Sbjct: 1008 VVHWLVPELCLQYPI--SASVYQTLQLVPDIMMHIDAVLLMHDAKKALGLS----GRMKD 1061
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
+L+A T +RLE LGD+ LK+ ++F+ +E ELT R ++N+
Sbjct: 1062 PYMLEAFTASSAGLEKDYQRLEFLGDSVLKFITSTYVFVTLPISNEFELTESRMRMISNT 1121
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV 1141
L K A + L Y ICS+ R + + DD +AE+
Sbjct: 1122 ALFKSAIQLRLYEY--------------------ICSQNLPRRFYRPPNYLCKDD-SAEM 1160
Query: 1142 RCSKGHHWLHKKTIADVVEALVGAFI------DDSGFKAATAFL--------------KW 1181
S +H L KT+ADVVE+ +GA G +A L +W
Sbjct: 1161 IKSLTYHKLSDKTLADVVESTLGASYLSCLGDKKQGDQALNEALHTTQRLLVPMQKMEQW 1220
Query: 1182 IGIQVEFEASQVTNICISSKSFLPL-SASLDMATLEILLGHQFLHRGLLLQAFVHPSF-N 1239
Q + + N + ++ PL +D+ + +LG++F + L+ +A H S N
Sbjct: 1221 SDFQTIYR-DERDNKQLKMAAYDPLFDQRIDIKKVSRILGYEFQNEALIAEALTHASVTN 1279
Query: 1240 RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFY 1299
CYQRLEFLGDAVLD+ +T+YL+ Y PG L DLR VNN + + + +
Sbjct: 1280 SSVPCYQRLEFLGDAVLDFCVTNYLFEKYHTAPPGTLHDLRKSSVNNDILSVLCIQLGLH 1339
Query: 1300 KFLIFDSNVLSETINNYVDYMITPSSTR-EVKEGPRCPKVLGDLVESSLGAILLDSGFNL 1358
+ S + + + ++ + E PKVL D+VES +GA+ +D+GFNL
Sbjct: 1340 VHIRHFSTTFPSAVKQFQELVVASQDEKGEYWLNFNPPKVLSDVVESLIGAVFVDAGFNL 1399
Query: 1359 NTVWKIMLSFLDPIL 1373
+ V + L P+L
Sbjct: 1400 DPVLGLFDRLLKPLL 1414
>gi|357129053|ref|XP_003566182.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1806
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 321/1012 (31%), Positives = 487/1012 (48%), Gaps = 115/1012 (11%)
Query: 661 DLHKLGALNDYLLPQEDNATEDEPMLFSSD-----SDSYEGEGSRGELHEMLVPAVLRQS 715
+L LG D L P + ED P+ + S++ G R ELH L +
Sbjct: 831 NLDLLGVPGDSLCP----SVEDPPLEIVNKASVLTSNAGVGTTKRKELHGTTRVCALSGT 886
Query: 716 WTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKL 775
W + ++L Y + F D + Y +F L + + + EA +L ++L+L + V +
Sbjct: 887 WASKRTVIKLQGYKLNFSCDQVGQKYSDFVLLIDTTIENEAANLDINLYL-HDKMVKASV 945
Query: 776 VPSGIM-------------QAQQFQEMFLKVILDRSEFNS--EFVPLGKDDYCESSSSTF 820
P G++ QA F +F K+ NS EF+ L KDD +++
Sbjct: 946 SPCGLLELDVQQMEKAKLFQALIFNGLFGKLFTGSKSSNSPREFI-LNKDDSLIWNNANM 1004
Query: 821 YLLLPVIFHKNS-----VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNG----- 870
YLLLP+ S ++W++I ++ S D+ +L + + ++G
Sbjct: 1005 YLLLPMDPTLESHDSFCINWRLIDEAATAVGLMRKVHSDDKMNLLAILDIDQNDGDLIHL 1064
Query: 871 --WSSESDV-ENSLVYATHKKWFY-------LVTNIVFEKNGYSPYKDSDSSSHVDHLIS 920
S E+ V N V A H Y L +N F+ G S K++ + ++
Sbjct: 1065 ANTSCEAHVLRNVAVLAVHTGKIYTSLHVTDLSSNSTFD--GVSDKKETGFKTFKEYFEK 1122
Query: 921 SYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-EYFDDLPPELCQLKIIGFS 979
YGI L+HP QPLL KP NLL + K+ D + ++ +PPEL L +
Sbjct: 1123 KYGIVLRHPSQPLLVLKPSHNPHNLL-SSKIRDEGPYVIKVNNRVHMPPEL--LIPLNLP 1179
Query: 980 KDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSL 1039
+DI + L PS+M+R+E L++A +L+ ++ + +S+ ++L+A+TT +C E FS+
Sbjct: 1180 EDILRAFYLFPSLMYRMETLMLASQLRSEVAYD----SNISSFLILEAITTLRCSEDFSM 1235
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ERLE+LGD+ LKYAV HLFL EG+L+ R++ ++N+ L +L + +Q YIRD
Sbjct: 1236 ERLELLGDSVLKYAVSCHLFLKFPNKHEGQLSSSRTDIISNAALYRLGIEHKIQGYIRDA 1295
Query: 1100 PFDPCQFFALGR--------RCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH 1151
FDP ++ A G+ +CP + S+ + IH D + C KGH W+
Sbjct: 1296 AFDPRRWLAPGQLTNRPFHCKCP-VDSEVVTKDIHVIDDKPT---IKIGQACDKGHRWMC 1351
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS--KSFLPLSAS 1209
KTI+D VEA++GA+ G +AA AFL+W+G+ E E + +S+ +++LP
Sbjct: 1352 SKTISDCVEAIIGAYYVGGGLRAAVAFLRWLGVDAEIEEELIMQTILSASMQTYLP---K 1408
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYS 1266
+D+ L LG+ F +GLLL+A HPS YQRLEFLGDA LD L+T +L++
Sbjct: 1409 IDLTEALGAKLGYAFSVKGLLLEALTHPSHQESEERYSYQRLEFLGDAALDILLTWHLFN 1468
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST 1326
+ G+LTDLRS VNN+ FA VAV F+ FL S +L + I Y + + SS
Sbjct: 1469 SHKDTDEGELTDLRSASVNNENFAKVAVKHKFHHFLQHSSEILLDQITEYANSLEN-SSM 1527
Query: 1327 REVK---EGP-RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNP 1382
E+ + P R PKVLGD+VES GAIL+D+ +L+ VW + L PI+ NL+L P
Sbjct: 1528 DEINLSSDAPLRGPKVLGDIVESIAGAILIDTKLDLDVVWGVFKPLLSPIVTPENLELPP 1587
Query: 1383 IRELLELC--NSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIAS 1440
RELLE C N Y L ++ G K A V KD V N +K+A A+
Sbjct: 1588 FRELLEWCNRNGYFLGIK---CTDGEKLQAILDVQLKDMLVVRRGFGKN--KKDAKAHAA 1642
Query: 1441 QQLFSKLKAAGYVPKTKSLESILKSSPKSEA--RLIGYDETPINVV-AADDNVFEKLKIS 1497
L L+ G + I K++ + E + G N+ A D V +
Sbjct: 1643 SMLLKDLEEKGLI--------ISKNAIRMEQFEKQWGSANHCHNMFDAVDTQVLTPARGK 1694
Query: 1498 EPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEE----GLSHLKL 1553
EP + P R LYELC W P F K + G S +K
Sbjct: 1695 EP-------LDKPVHLAVKTSKGGPRIALYELCKKLQWPAPKFVSVKTQPSAAGGSSMKA 1747
Query: 1554 ----FTFRVIVEIEAPEK-IIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
F+F + + P +I G+ A KK + + AA ML L+R+G L
Sbjct: 1748 TTQEFSFASNITLHVPNSDVISLRGDGFADKKSSQDSAALLMLHELQRQGRL 1799
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 570 FTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHII 629
F E Y+V ++GA ++A V+++ +YC KLP D++ +P F + D G +C +
Sbjct: 624 FPIGEINEYRVGTTGAKVTADSSVNVIVQYCDKLPKDKYHTRRPLFEFTDHGDGFVCKLT 683
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
LP++ + +VG S + AK+ CL A + LH LGAL+D L P+
Sbjct: 684 LPSSDVLPPLVGPKVRSKQKAKQLVCLDACKQLHLLGALDDCLCPR 729
>gi|315044595|ref|XP_003171673.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
gi|311344016|gb|EFR03219.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
Length = 1518
Score = 370 bits (951), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 409/1428 (28%), Positives = 633/1428 (44%), Gaps = 257/1428 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK---------PQKSICIF 110
R+YQLEL +KA E+NII L TG GKT IAVLL L H+I + P + I F
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLL---LKHVIEQELTDRGVGLPPR-ISFF 167
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V LV QQA V++ +I K+ FCG + L + WE + V+V ++L C
Sbjct: 168 LVDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQC 227
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H FI++ I LLIFDE HHA K HPYA+I+KDFY ++ + PRIFGMTASPV
Sbjct: 228 LLHSFIQIGQINLLIFDEAHHA--KKEHPYARIIKDFYLKELERKPRIFGMTASPV---- 281
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS-YVTC 288
A+ + + +LEN+LD+++ + + L V+ P+ V++Y + + Y
Sbjct: 282 -DAKVEVVSAAKTLENMLDSQIATASNPSLLRQSVARPIEEVWEYDRLEAPFETPLYTQL 340
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV-CGALHASYIL 347
E+ +IK + I SR+ NLG C SY L
Sbjct: 341 REKFGDIKVLEKIFKFSRETS-----------------------SNLGSWCSDWIWSYCL 377
Query: 348 LSGDETMRNELIEAEGN-TIDDSLCRFASQASEVFAAICRRDG-IASDLSCIEVLKEPFF 405
+ET+ +EA N + +L +S +E A R G I D +P
Sbjct: 378 --SEETLPK--LEARSNRPLMKNLANHSSGDTE--AERIRDAGAIIKD----HEFGDPIA 427
Query: 406 SKKLL------RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
+ KLL +L F+ +CIVF + TAR L + Q ++ R + LV
Sbjct: 428 NPKLLSPKVLLLRDELLRRFKENPDTRCIVFTAQRHTARILRDLFQKIRS-QYIRPNLLV 486
Query: 460 GVNA-----GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
GV + GL R +++ FR GE+N L AT V EEGLDIQ C L++RFDL T
Sbjct: 487 GVRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYST 545
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR---------- 564
+ +IQSRGRAR +S +A +V+ N LI + EE R + E++ R
Sbjct: 546 LIQYIQSRGRARHTESTFAHMVERNN-----LIHETAVEEVRRSEEVLTRFCKSLPEDRL 600
Query: 565 --TSSDAFTCSE----ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
S D E ++ Y + S+GA ++ +++L Y S L +++ + + +
Sbjct: 601 LKGSGDIDMIMEKDRQQKSYIIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYIIH 660
Query: 619 DDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL------ 672
G IC ILP +PI +G S AK+ A + L K L++Y
Sbjct: 661 PKDGAFICETILPEKSPIRGCMGKSASRKLFAKQSAAFETCLLLRKNKLLDEYFISTYHK 720
Query: 673 -LPQEDNA----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR----QSWTKSQYPV 723
LP NA T + +S S E SRGE +L VL Q+ K+ +P+
Sbjct: 721 RLPVMRNARLAITSKKSNKYSMISKPAAWEHSRGESPTLLYATVLSLSDCQNLQKTYHPI 780
Query: 724 RLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLH---LARGRSVMTKLVPSGI 780
L + +P P + F L+++ + ++VD L+ ++TK
Sbjct: 781 VL----LTRVPMPD---FPSFPLYLEHNKKCSSFSIRVDQGFKVLSPELDLLTKFT---- 829
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV-------IFHKNSV 833
+ F+++F K+ Y E+SS YL+ P I N V
Sbjct: 830 --FRVFEDVFHKI------------------YEENSSLVSYLIAPAKLDGVADIMKANPV 869
Query: 834 ---DWKIIRRCL-SSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW 889
DW++++ + + +PG +P+ L N + LV ++
Sbjct: 870 ELIDWQMLQYIQHNQELLWSPG-------MPNEF---LENRF---------LVDKWDGRY 910
Query: 890 FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHL-KHPK----------QPLLRAKP 938
Y + + P ++ + I SY + L K+ + QP+LR++
Sbjct: 911 RYFSIKVDPTRRPQDPVPENVARRRYMDNIMSYCLSLFKNSRAGFMNSCNWDQPVLRSEL 970
Query: 939 LFRLRNLLHNRKLEDSESHELEEYFDDLPPELC--QLKIIGFSKDIGSSLSLLPSIMHRL 996
+ RN L +++++ +Y+ +C LKI S + + + + P+++ R+
Sbjct: 971 IQLRRNFL---DIDENQKSATVDYY------VCVEALKISSISVPLATQIFVFPAMIWRM 1021
Query: 997 ENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK--------CQERF------SLERL 1042
E+ L+A+E L P E+ L+ALT + Q +F + ERL
Sbjct: 1022 ESYLIALEACEKLQLKIP------PELALEALTKDSENTEDYGMEQIKFQSGMGKNYERL 1075
Query: 1043 EILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFD 1102
E LGD FLK A LF ++ DE + +R + N NL A + +IR + F
Sbjct: 1076 EFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRSFS 1135
Query: 1103 PCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
++ G + K+ P+ H L KTIADV EAL
Sbjct: 1136 RRAWYPEGLTLLKGKDKK-----------EGPNG---------PEHALADKTIADVCEAL 1175
Query: 1163 VGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS-LDMA 1213
+GA + D KA T F+ +VE A + S SAS +D+A
Sbjct: 1176 IGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSKLYSLPSYQTAVASASEIDVA 1235
Query: 1214 T-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYP 1269
++ LG+ F + LL AF+HPS+ CYQRLEFLGD++LD + ++L+ YP
Sbjct: 1236 NQIKSKLGYCFRYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDSLLDMVCVNHLFERYP 1295
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE- 1328
P LT+ + +V+N+ ++AV + + LI SN L I +Y + + E
Sbjct: 1296 DKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQAMKIKMEG 1355
Query: 1329 -------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
E P+C L D+VE+ LGA+ +DS FN + V F+
Sbjct: 1356 NLEAWTYTNEPPKC---LPDIVEAYLGAMFVDSNFNFDVVDDFFRKFI 1400
>gi|442570277|sp|Q1DKI1.3|DCL1_COCIM RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|392869759|gb|EJB11896.1| dicer-like protein 1 [Coccidioides immitis RS]
Length = 1500
Score = 365 bits (936), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 400/1419 (28%), Positives = 604/1419 (42%), Gaps = 239/1419 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL +KA ++NII L TG GKT IAVLL L H+I KP + + F
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLL---LKHIIEQELIDRSAEKPHR-VSFF 155
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V LV QQA V++ +I +V FCG + L + WE+ + + V+V ++L C
Sbjct: 156 LVDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQC 215
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGK 228
L H F+KME I LLIFDE H+A K +HPYA+I+KDFY D K P+IFGMTASPV
Sbjct: 216 LLHAFVKMENINLLIFDEAHNA--KKDHPYARIVKDFYLKDGNAKRPKIFGMTASPV--- 270
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
A+ ++ K+ +LE LL++++ + + L V P V+ Y +
Sbjct: 271 --DAKMDVVKAARNLETLLNSQIATASNLSLLRQSVPRPNEEVWSYDRL----------- 317
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL- 347
+Q E + ++ LR+ L L F L+ GA A ++
Sbjct: 318 -DQPFETRL-------------YKELRSRFGDLRALEKLFTFSLKASSNLGAWCADWVWS 363
Query: 348 --LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ + + E A + + + +E+ + I S ++
Sbjct: 364 YALTEESLPKLEGRAARTAMGNLPIAKIVRPEAEIQRIREASEIIRSHKFGDPAVRPELL 423
Query: 406 SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV--- 461
S K+ RL +L F KCIVF + TAR L + + R L+GV
Sbjct: 424 SPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSRIG-TKHLRPGVLIGVRSD 482
Query: 462 -NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ G+ R + +++ FR GE+N L AT V EEGLDI C L++RFDL T+ +IQ
Sbjct: 483 ASGGMNISFRQQVLAVV-SFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQ 541
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--------EIMDRTSSDAFTC 572
SRGRAR S +A LV+ N + + + E+ M R I++ DA
Sbjct: 542 SRGRARHMNSTFAHLVERDNFVHRESVNHLQSSEEIMKRFCISLPKDRILNSDDVDALYE 601
Query: 573 SE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIIL 630
S+ + Y V ++GA ++ + +L + + L +++ + +Y+ +C ++L
Sbjct: 602 SDRNRKSYTVQTTGAKLTYSSSLVVLAHFANSLQYEKETSTVVSYYHRFTKNAFVCEVVL 661
Query: 631 PANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDE 683
P +PI IVG P S AK+ A + L K G L+D+ LP NA
Sbjct: 662 PEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFVSTYHKRLPAMRNA---R 718
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDP-ADRIYR 742
+ S S+ Y +M V L ++ ++ P LN + F P R Y
Sbjct: 719 LAISSKKSNQY----------DMKVKPKLWET-SRGIIPTSLNIVVLGFRPRRLLHREYH 767
Query: 743 EFGLFVKSLLPGEAE---HLKVDLHLARGRSVMTKLVPSGIMQAQQ------------FQ 787
L + LP E +L+ D+ V+ + SG + FQ
Sbjct: 768 PLVLLTREKLPHFPEFPLYLEDDIEC----DVICSSISSGFQVSSHDLEVLTTFTLRIFQ 823
Query: 788 EMFLKVI-LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPV 846
++F KV D PL C+ SSS ++ +DW I++ +P
Sbjct: 824 DIFHKVYDRDVGMMTYWLAPLNLS--CDISSSA---------SRDLLDWGILQFVFDNP- 871
Query: 847 FGTPGGSVDRKSLPSHGPLQLHNGWSSESDV---ENSLVYATHK-KWFYLVTNIVFEKNG 902
+P WSS + N VY ++ Y I
Sbjct: 872 -----------EIP----------WSSSNSAAFFANRFVYDRWDGRYRYFTHGIDPSLRP 910
Query: 903 YSPYKDSDSSSHVDHLISSYGIHL-KHPK----------QPLLRAKPLFRLRNLLHNRKL 951
P S + I Y + L K+ + QP+++A+ + RNLL R
Sbjct: 911 SDPPPSSMARRRHMGNIMDYCLSLFKNARKKFLENCDWTQPVIKAEIIQLRRNLLDKRT- 969
Query: 952 EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA 1011
+ E + +Y+ L P L I + + P+I+ R+E+ L+A+E L
Sbjct: 970 -NKEKIKEGDYYICLEP----LTISAIPASVAAFAFAFPAIISRIESYLIALEACQELDL 1024
Query: 1012 SFPEGAEVSAEMLLKALTTE-------KCQERF-------SLERLEILGDAFLKYAVGRH 1057
+S E+ L+ALT + + Q+ + ERLE LGD FLK A
Sbjct: 1025 P------ISPELALEALTKDSDNTDEHRAQQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1078
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF ++ DE + +R V N NL K A R L +IR Q F ++ G
Sbjct: 1079 LFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYAFIRSQSFSRRGWYPGGL------ 1132
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA--------FIDD 1169
T Q G ++ H L KTIADV EAL+GA D
Sbjct: 1133 ---TLLQGKGQSKG-----------ATENKHALADKTIADVCEALIGACCLLASKNHRFD 1178
Query: 1170 SGFKAATAF--------LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLG 1220
KA TA L W + + + +A LD+A ++ LG
Sbjct: 1179 IAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVD-------AAELDLAAQVKKKLG 1231
Query: 1221 HQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
+ F + LL AF HPS+ CYQRLEFLGDA+LD ++Y +P P LT
Sbjct: 1232 YDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIYHKHPDKDPQWLT 1291
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-------PSSTREVK 1330
+ + +V+N+ +VAV + L S L I NYV+ + P +
Sbjct: 1292 EHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGDPPDAWTLT 1351
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
P PK L D+VE+ +GAI +DSGF+ V + FL
Sbjct: 1352 SDP--PKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFL 1388
>gi|449453061|ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
Length = 1359
Score = 364 bits (934), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 273/768 (35%), Positives = 397/768 (51%), Gaps = 58/768 (7%)
Query: 858 SLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDS------DS 911
+LP LQ G S+ + ++L H Y + +V + SP+ + D
Sbjct: 616 TLPPTAALQTIVGPSTRN---SNLSKQLHTGRIYSIVEVVSNTSAESPFDGNSDKGPPDY 672
Query: 912 SSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE--------EYF 963
+ D+ YGI L PKQPLLR K NLL N K E + S +L +
Sbjct: 673 ITFADYFNKRYGISLSFPKQPLLRLKQSHNPHNLLVNFKDEGNTSDKLPSGPAFKRPQMH 732
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
+PPEL + + K + S LLPS++HR E+L++A +L+ ++ +S+ +
Sbjct: 733 VHMPPEL--VLSMDVPKGVLKSSYLLPSLIHRFESLMLASQLRKEINY-HSNSLGISSSL 789
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALTT E FSLERLE+LGD+ LKYAV HLFL EG+L+ RR + N+ L
Sbjct: 790 ILEALTTLGSCENFSLERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATL 849
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKET-ERTIHSQYDGRAPDDLN 1138
L + LQ YIRD FDP ++ A G R P C +T E +H ++ P +
Sbjct: 850 HALGTKCGLQGYIRDSAFDPRRWVAPGQCTNRPVPCKCGVDTVEVPLHDKFCTEDPKVVL 909
Query: 1139 AEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI 1198
+ C KGH W+ KTIAD EAL+GA+ D G AA +KW+GI V + + V + I
Sbjct: 910 GKC-CDKGHRWVVSKTIADCAEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVD-AI 967
Query: 1199 SSKSF--LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDA 1254
+S S PL + ++ATLE +G+ F +GLLL+A H S +G CYQRLEFLGD+
Sbjct: 968 TSASLRSCPLGDT-EIATLESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDS 1026
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
VLD LIT + Y Y + PG+LTDLRS VNN+ FA VAV ++ + L S +L I
Sbjct: 1027 VLDLLITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQIT 1086
Query: 1315 NYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
YV Y+ T + G + PKVLGD+VES GAIL+D+ NL+ VWKI L P +
Sbjct: 1087 EYVKYLSESQDTGKPLHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVT 1146
Query: 1375 FSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKE 1434
L+L P+REL+ELC+S ++ +KG F AE ++ + +D + +RK
Sbjct: 1147 PDKLELPPLRELIELCDSLGYFIKDKCTRKGETFHAELRL--QLQDSLLIGEGYERTRKA 1204
Query: 1435 AIRIASQQLFSKLKAAGYVPKTKSLESILKSSPK-SEARLIGYDETPINVVAADDNVFEK 1493
A A+ +L ++L+ G + ++S K +P E+ ++ + A D NV
Sbjct: 1205 ARGEAAHRLLAQLETRG-ISYSRSGSKKRKQNPSHDESAMVLPSSVNCSTDACDPNVETP 1263
Query: 1494 LKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANC-WKPPTFDCCKEEGLSHLK 1552
+ IG +L GG RS L+ELC W + EGL K
Sbjct: 1264 V------------IGPINLKKGG-----PRSTLFELCKKLLYWYRVQIEI--GEGLEKRK 1304
Query: 1553 LF-TFRVIVEIEAPEK-IIECIGEPQAKKKGAAEHAAEGMLWCLEREG 1598
F +F + ++ P +EC GE +A KK + + A+ ML L+++G
Sbjct: 1305 GFNSFLSNITLQIPNAGYVECEGEARADKKSSFDSASLVMLQELQQQG 1352
Score = 337 bits (865), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 213/619 (34%), Positives = 331/619 (53%), Gaps = 31/619 (5%)
Query: 43 ESSVGAQKTDKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E SV + +++ + + I R+YQ+E+ + M N I LGTG GKT IAV+LI E+ +
Sbjct: 21 EPSVASDQSNFNVAEGFIPRRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAM 80
Query: 101 RKP-QKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYE 157
+ K + IFLAPTV LV QQ VI++ F+V + G G +C WEKE + +
Sbjct: 81 KSSSDKKLIIFLAPTVHLVHQQFNVIKDHTDFEVAEYYGAMGVDDWNMNC-WEKETSERD 139
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRI 217
VLVM PQILL L + ++ I L+I DECH A NHPY KIMK+FY K P+I
Sbjct: 140 VLVMTPQILLDALRKAYFRLGTICLMIIDECHRAT--GNHPYTKIMKEFYHKSDSK-PKI 196
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV 277
FGMTASPV+ KG S+ + I LE++LDA+VY++ED +++E +V S Y P
Sbjct: 197 FGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIEDKKEVEIYVPSAKEICIFYEPA 256
Query: 278 INDTSSSYVTCSEQLAEIKREQYISALSRKLHDH-----QSLRNTTKQLNRLHDSMKFCL 332
+ T + + K + +S + H L+ K+L+ H + +CL
Sbjct: 257 MPQTME--LKAKIEALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCL 314
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ LG+ A A +L + ++ NE E + +S ++ E I + +
Sbjct: 315 DELGIMCAYEAIKVLFE-NVSVPNE----ESDVYRESFLQYKHFLEEALLVIGESLSLEN 369
Query: 393 D------LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
+ + ++ + S KL L+ + +F + + + C++FV RI+ A + I++
Sbjct: 370 ENVPTLGFDLWKAVELGYISPKLFELLQLFESFGVSRQVLCLIFVERIIAANVIERIVKK 429
Query: 447 LKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
++ L+ + ++ G NA + +++ K LE F G+LNLL +T V EEGL + C V
Sbjct: 430 VENLSHFTVSYVTGCNASVGALAPKVQKETLELFCHGKLNLLFSTDVVEEGLHVPNCSFV 489
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN--QREL--DLIKNFSKEEDRMNREIM 562
+RFDLP+TV S++QSRGRAR S+Y L++ GN QR L D+I++ D +
Sbjct: 490 VRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALLFDVIRSDRSMTDAAMSRDL 549
Query: 563 DRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D F+ E Y V+++GA ++A V L+++YC KLP D++F+PKP F G
Sbjct: 550 DACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQYCKKLPGDKYFSPKPIFQLSYGEG 609
Query: 623 GTICHIILPANAPIHQIVG 641
C + LP A + IVG
Sbjct: 610 SYECQLTLPPTAALQTIVG 628
>gi|398392319|ref|XP_003849619.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
gi|339469496|gb|EGP84595.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
Length = 1537
Score = 358 bits (920), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 388/1426 (27%), Positives = 600/1426 (42%), Gaps = 236/1426 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +EN I L TG GKT IAVLL+ EL + FL +
Sbjct: 94 REYQIELFERAKKENTIAVLDTGSGKTLIAVLLLRWMIDNELEDRAAGKPSRVSFFLVSS 153
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ V+E ++ KV CG + + WEK + +V+V +IL CL
Sbjct: 154 VTLVYQQHSVLECNLDHKVARLCGADNVDRFNKSSWEKLFYENKVIVCTAEILFQCLSRS 213
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
+I M+ I LLIFDE HHA K NHP+A+I+KDFY +PD PR+FGMTASP+
Sbjct: 214 YITMKQINLLIFDEAHHA--KQNHPFARIVKDFYLTEPDATSCPRVFGMTASPI-----D 266
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ ++ ++ + LE LL ++ + D ES + P V QY + T +E
Sbjct: 267 AKTDVVQAASELETLLGCRIATTSDMSLAES-IKKPKECVLQYDALPQ-------TGAET 318
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
L + +L + + T +Q + + + + AL S L +
Sbjct: 319 L-------LLQSLKARYGHVEVFNKTFEQATDISRVLGRWCADSHLVDAL-GSDKLKKLE 370
Query: 352 ETMRNELIEAEGNTIDDSLCRFAS---QASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
T+ + + DS R A Q E+ A+ A+ + + + S K
Sbjct: 371 ATVERRFYARDRSQAADSEARQAELERQLKELRDAVAYVQEQATSTANLATVTADDVSSK 430
Query: 409 LLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVG---VN 462
+ L G L + F + +CIVFV++ TAR L+ + Q + K L S FL+G N
Sbjct: 431 VWSLRGHLDAQFERPSNHRCIVFVDQRYTARLLTRLFQKIGTKHLHS---QFLIGHGSGN 487
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
A S + L KFR G N L AT V EEGLD+ C LV+RFD+ +T+ ++QSR
Sbjct: 488 ADEGSFTFRQQVWTLLKFRKGVFNCLFATSVAEEGLDVPDCNLVVRFDMYKTMIQYVQSR 547
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM----NREIMDRT---SSDAFTCSEE 575
GRAR S + +++ GN + +L+ +E M N DR + D E
Sbjct: 548 GRARNINSTFIHMLEMGNSIQTNLLNEVRHQEKAMRDFCNLLPADRKLDGNQDGLNELLE 607
Query: 576 -----RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIIL 630
R Y V ++GA ++ G +S+L + S +P D P + ++L
Sbjct: 608 KEKNTRTYTVPATGAKLTYGNALSILAHFVSAVPSDSDEPQHPTCVISVTGQKFLAEVLL 667
Query: 631 PANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-QEDNATEDEPMLFSS 689
P N+PI ++G P+ + AK A A +L K L+ +L+P + L ++
Sbjct: 668 PGNSPIRSVLGRPEQRKQLAKCSAAFNACLELRKKEYLDAHLMPIYQKKLPAMRNALLAT 727
Query: 690 DSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--YPVRLNFYFMQFIPDPADRIYREFGLF 747
D +G V + W + + P +L + F P DR +R F +
Sbjct: 728 GMDKTKG----------FAMQVKPKIWAEQRGIVPSQLWITLVDF-PQGLDRPHRSFAML 776
Query: 748 VKS---LLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILD 796
+S LP G++ + V L+R V ++L+ + L++ LD
Sbjct: 777 TRSSILQLPKFPVFPSIGKSSDV-VSASLSRPLEVTSQLLA-------KLTAFTLRIFLD 828
Query: 797 RSEFNSEFVPLGKDDYCESSSSTFYLLLP--VIFH--------------KNSVDWKIIRR 840
+ Y E + Y L+P + H + +DW ++
Sbjct: 829 ----------VFSKTYEEDDAKLSYWLVPTTIALHGDEASKDRIRSIDPREVIDWNLVES 878
Query: 841 CLSSP----VFGTPGGSVDRKSL--PSHGPLQLH----NGWSSESDVENSLVYATHKKWF 890
+ G P + K + P G + + +G ++D S V KW
Sbjct: 879 VFDNKEHKWTPGMPNDFLANKFITDPWDGSRKFYSKAVDGSLRQTDDLPSDVVPPRAKW- 937
Query: 891 YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRK 950
T +K++D S H QP++ A+ + RN+L +
Sbjct: 938 ---TGKTIMDYSVRLWKNADKKSQW------------HDNQPVIEAEKVLLRRNMLASPD 982
Query: 951 LEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
++ S + Y P L+I ++ +SL P+++HR+E L++IE
Sbjct: 983 QQEV-SVSTKAYICPEP-----LRISAIPPELATSLLFWPAVIHRIEAYLISIE------ 1030
Query: 1011 ASFPEGAEVSAEMLLKALTTE-------KCQERFSL--------ERLEILGDAFLKYAVG 1055
S G L A T + + QER + ERLE +GD FLK A
Sbjct: 1031 GSASVGVACDPTFALAAFTKDSDNQGEHEAQERVNFQRGMGENYERLEFIGDTFLKTATT 1090
Query: 1056 RHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR 1115
F+ + +E E RR + N NL + A L YIR F+ ++ G +
Sbjct: 1091 ISTFIQNPNDNEFEFHVRRMQMLCNKNLFEHALEYKLYEYIRSMAFNRRTWYPEGMKL-- 1148
Query: 1116 ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
I Q E+ S+ H L KKTIADV EAL+GA
Sbjct: 1149 ---MAGTGVIKGQ---------EKEMYHSEMTHVLGKKTIADVCEALIGA---------- 1186
Query: 1176 TAFL-------KWIGIQVEFEASQVTNICIS------------SKSFLP-------LSAS 1209
AFL KW E VT + S + LP +
Sbjct: 1187 -AFLTHNQPDEKWQPHHWEPAIQAVTKLVKSDDHTMLTMDDYKAAYLLPDYQTAHVTAVQ 1245
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLY 1265
D+A +++ + F + LL AF HPS + YQRLEFLGDA+LD SYL+
Sbjct: 1246 RDLAEKIQLEHAYSFNYPRLLYSAFSHPSNPYMHAQVPNYQRLEFLGDALLDQASISYLF 1305
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
+P P LT+ + +V+N+ + V+ F+K L + L + I+ YVD ++ +
Sbjct: 1306 YKFPAADPQWLTEHKMAMVSNKFLGALCVNIGFHKHLRHSHSSLGKQIHAYVDELVEART 1365
Query: 1326 TREVKEGPRC----------PKVLGDLVESSLGAILLDSGFNLNTV 1361
+ GP C PK L D++ES +GA+ +DS FN V
Sbjct: 1366 S----SGPDCRDYWTTVSDPPKCLPDVIESFVGAMFIDSNFNFAEV 1407
>gi|296809942|ref|XP_002845309.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
gi|238842697|gb|EEQ32359.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
Length = 1521
Score = 357 bits (915), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 391/1399 (27%), Positives = 633/1399 (45%), Gaps = 215/1399 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAH--LIRKPQKSICIFLA 112
R+YQLEL +KA E+NII L TG GKT IAVLL+ ELA L R P+ I FL
Sbjct: 114 REYQLELFEKAKEKNIIAVLDTGSGKTLIAVLLLKHVIEQELADRSLGRPPR--ISFFLV 171
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
+V LV QQA V++ +I K+ FCG + L + WE + V+V ++L CL
Sbjct: 172 DSVTLVYQQAAVLQNNIAQKMDKFCGAMRTDLWNKEVWEGHFKKNMVIVCTAEVLHQCLL 231
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
H FI++ I LLIFDE HHA K HPYA+I+KDFY + + P+IFGMTASPV
Sbjct: 232 HSFIRISQINLLIFDEAHHA--KKEHPYARIIKDFYMREPERKPKIFGMTASPV-----D 284
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ + + +LE +LD+++ + + L V+ P +++Y +
Sbjct: 285 AKVQVVSAAKTLETMLDSQIATASNPSLLRQSVARPREEIWEYDRL-------------- 330
Query: 292 LAEIKREQYI-SALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL--L 348
E+ E + S L R+ D + L KF E G+ + ++
Sbjct: 331 --ELPFETPLHSQLCRQFGD----------IKVLEKIFKFSFETSSALGSWCSDWVWSYC 378
Query: 349 SGDETMRNELIEAEGNT-IDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSK 407
+ET+ +EA N I +L + E I I D + + P
Sbjct: 379 LNEETLPK--LEARSNKPIMKNLPSEPDRDRET-ERIRAAGAIVRDHEFGDPVTNPRLLS 435
Query: 408 KLLRLIG--ILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVNA 463
++L+ +L F+ +CIVF + TAR L + + + +++ R + LVGV +
Sbjct: 436 PKVQLLKNELLRRFKENPDTRCIVFTAQRHTARILRDLFKKIGSQYI---RPNLLVGVRS 492
Query: 464 -----GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
GL + R +++ FR GE+N L AT V EEGLDIQ C L++RFDL T+ +
Sbjct: 493 GGDRIGLDTSFREQFLNVI-AFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQY 551
Query: 519 IQSRGRARMPQSEYAFLVDSGN----------QRELDLIKNFSKE--EDRMNREIMDRTS 566
IQSRGRAR +S + +V+ N +R +++ F K E+R+ + MD
Sbjct: 552 IQSRGRARHIESTFVHMVERNNLIHESVVEEVRRAEEILVRFCKSLPENRLLKG-MDDID 610
Query: 567 SDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC 626
S + + Y + S+GA ++ +++L Y S L +++ + + + G IC
Sbjct: 611 SILEKDRQRKSYTIKSTGAKLTYPSSLAVLAHYASSLQYEKELSAQVSYVIHVKDGAFIC 670
Query: 627 HIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNA 679
ILP +P+ +G P S AK+ A + L K G L++Y LP NA
Sbjct: 671 EAILPEKSPVRGCMGKPASRKLLAKQSAAFETCLILRKNGLLDNYFISTYHKRLPAMRNA 730
Query: 680 ----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD 735
T + + S E +RG+ +L +L S ++ + +P
Sbjct: 731 RLAITSKKSNQYRMISKPAAWEYARGDSPTVLYATILSLSNSEGLRKKYHPLVLLTRVPM 790
Query: 736 PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL 795
P + F L++++ + ++VD L + V L+ + + F+++F K+
Sbjct: 791 PD---FPSFPLYLENNTKCSSCSIRVDKAL-KVLPVELDLLTNFTFRV--FEDVFHKIYE 844
Query: 796 DRSEFNSEFV-PLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSV 854
+ S S ++ P DD + S PV ++W++++ +
Sbjct: 845 EDSSLVSYWIAPAKLDDIPDIKKSN-----PV----EIINWQMLQYIRDTE--------- 886
Query: 855 DRKSLPSHGPLQLHNGWSSESD---VENS-LVYATHKKWFYLVTNIVFEKNGYSPYKDSD 910
+LH WS E +EN LV ++ Y + ++ P ++
Sbjct: 887 -----------ELH--WSPEMPTDFLENRFLVDRWDGRYRYFSIEVDPARHPKDPVPENV 933
Query: 911 SSSHVDHLISSYGIHL-KHPK----------QPLLRAKPLFRLRNLLHNRKLEDSESHEL 959
+ I +YG+ L K+ + QP+LRA+ + RN L +++++
Sbjct: 934 ARRRYMDNIMNYGLSLFKNSRARFLAKCNWDQPVLRAELIQLRRNFL---DIDENKKGPP 990
Query: 960 EEYFDDLPPELC--QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA 1017
+Y+ +C LKI + + + + P+++ R+E+ L+A+E L
Sbjct: 991 VDYY------ICAEALKISSIPMPVATLIFVFPAMISRMESYLIALEACEKLQ------L 1038
Query: 1018 EVSAEMLLKALT--TEKCQE------RF------SLERLEILGDAFLKYAVGRHLFLLHD 1063
++S E+ L+ALT +E +E RF + ERLE LGD FLK A LF ++
Sbjct: 1039 KISPELALEALTKDSENTEEHGLEQIRFQSGMGKNYERLEFLGDCFLKMATSISLFAMNP 1098
Query: 1064 TVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETER 1123
DE + +R + N NL A + YIR + F ++ G + K+
Sbjct: 1099 DNDEYDFHVKRMLLICNQNLFNNAIILEVFKYIRSKSFSRRGWYPEGLTLLKGKDKKE-- 1156
Query: 1124 TIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DDSGFKAA 1175
+ P H L K+IADV EAL+GA + D KA
Sbjct: 1157 ------NPGGPT------------HALADKSIADVCEALIGASLLAGGPDHKFDMATKAV 1198
Query: 1176 TAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS-LDMAT-LEILLGHQFLHRGLLLQAF 1233
T F+ +VE A T +++ +AS D+A +E LG++F + LL AF
Sbjct: 1199 TIFVNSDDHRVERWADYSTLYSLTTYQTAAATASEADVANQIEEKLGYRFKYPKLLRSAF 1258
Query: 1234 VHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
+HPS+ CYQRLEFLGD++LD ++L++ YP P LT+ + +V+N+
Sbjct: 1259 MHPSYPSQWANVPCYQRLEFLGDSLLDMACVNHLFTKYPDKDPQWLTEHKMAMVSNKFLG 1318
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS--------STREVKEGPRCPKVLGDL 1342
++AV + + LI SNVL I Y + + + E P+C L D+
Sbjct: 1319 SLAVGLNLHVHLIHISNVLQGQITCYTEELQAMKMEMGGNLEAWTYTNEPPKC---LPDI 1375
Query: 1343 VESSLGAILLDSGFNLNTV 1361
VE+ LGAI +DS FN + +
Sbjct: 1376 VEAYLGAIFVDSNFNFDVI 1394
>gi|330913942|ref|XP_003296428.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
gi|311331414|gb|EFQ95479.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
Length = 1572
Score = 355 bits (912), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 412/1464 (28%), Positives = 624/1464 (42%), Gaps = 260/1464 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQ EL ++A EN+I L TG GKTHIA LL+ EL H + + FL +
Sbjct: 118 RDYQTELFQRAKGENVIAVLDTGSGKTHIATLLLRHVLDAELEHRAKGGAPKMAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ+ V+ + V CG L S W+ D V+V ++L+ C+ H
Sbjct: 178 VNLVFQQSNVLRCGLDQNVEGICGSMGASLWSRKTWQTYFDTNMVIVCTAEVLVQCMMHS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI M I LLIFDE HHA KSNHPYA++MKD+Y + D+ K PRIFGMTASPV KG S
Sbjct: 238 FITMSQINLLIFDEAHHA--KSNHPYARLMKDYYAHELDLSKRPRIFGMTASPVDTKGLS 295
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A ++ ++ LE LL AK+ + ++ + +S P D + TC +
Sbjct: 296 AD-HIKQAAGDLEKLLYAKIATTTESTLASNSISRP------------DEEVAIYTCLQD 342
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL--ENLGVCGALHASYILLS 349
E Q I K D S + KF + + GV AS + S
Sbjct: 343 EFETPLHQKIKT---KFGDLPSFK-------------KFFVASKRHGVELGRWASDMYWS 386
Query: 350 ---GDETMRN----ELIEAEGNTIDDSLCRFASQASEV--FAAICRRDGIASDLSCIEVL 400
DE R E ++ +DD + ++ ++ + A R+ C L
Sbjct: 387 FAFADEQSRKFQERERLKHNRANVDDDVQKWDAKLKRLQEAAEFVRQFDFGE---C--TL 441
Query: 401 KEPFFSKKLLRLIGILSTF-RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
+ S K+L+L L + +CIVFV + TAR L I +L + RC LV
Sbjct: 442 SDKDVSSKVLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGG-PNLRCSVLV 500
Query: 460 GVNAGLKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
GVN + + + IL KFR GELN L AT V EEGLDI C LV+RFDL T+ +
Sbjct: 501 GVNNRINEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIA 560
Query: 518 FIQSRGRARMPQSEYAFLVDSGN----------QRELDLIKNFSKE--EDRMNREIMDRT 565
++QSRGRAR S+Y +++ GN +R+ +++NF ++ +DR E D+
Sbjct: 561 YVQSRGRARHRNSKYLHMLEEGNHDHRERIMDVKRDEQVMRNFCRDLPQDRQINEF-DKD 619
Query: 566 SSDAFTCSEERI-YKVDSSGACISAGYGVSLLHRYCSKLPH-DEFFNPKPKFYYFDDLG- 622
S + ++ V GA +S +S+L+ + + LP D +P + +
Sbjct: 620 SMNLLMFEDKSFPIFVTKPGAKLSYRSSLSILNHFVATLPGPDRQTLLQPTYVISSEFQH 679
Query: 623 --------GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-- 672
G +C +ILP +P+ I+G Q AK A K L+K G L+D L
Sbjct: 680 NAIDPQRRGFVCEVILPEYSPVTSIIGDIQGKKTIAKCSAAFKTCLQLYKKGYLDDNLLP 739
Query: 673 -----LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
LP NA +L S E +G ++ ML+ W + V +
Sbjct: 740 TTFRNLPAGRNA-----LLALS-------EKKKG-MYSMLIKPNF---WKLGRGTVPTHL 783
Query: 728 YFMQFIPDPA-DRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQF 786
Y D DR ++ GL ++ P + ++L GR PS
Sbjct: 784 YLTVVDLDSGLDRPHQPLGLLTRNPFP---QLPNFPIYLTDGRPSNIVSQPSDT--PLPV 838
Query: 787 QEMFLKVILDRSEFNSE-FVPLGKDDYCESSSSTFYLLLPVIFHKNS-----------VD 834
E L V+ +EF + + +Y + Y ++PV+ + + +D
Sbjct: 839 SETMLDVL---TEFTLRIYQDIYNKEYEKDVQKMSYWVVPVVSSQITSLPSVTTIDQILD 895
Query: 835 WKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVY----ATHKKWF 890
I R S P + +VD K P L N + + Y A H K
Sbjct: 896 MNQISRVYSKPTWR---WTVDTK------PEDLINQYFVDPMNGGRRYYVNRLAPHLKPQ 946
Query: 891 YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRK 950
V + +N + DS + + I +P QP+L + + RN H +
Sbjct: 947 DPVPKGIPRQN--HKFMDSILDYSDSKWLKTRDISKWNPSQPVLEVEKIPFRRN--HLAR 1002
Query: 951 LEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHL 1008
+ED E EL DDL +C L + + +LP+I+HR E+ L+A++ +
Sbjct: 1003 IEDKEKGEL----DDLKTYVCPEPLLVSNLATPFVVMCYVLPAIIHRFESYLIALDACEV 1058
Query: 1009 LSASFPEGAEVSAEMLLKALTT------EKCQERFSL--------ERLEILGDAFLKYAV 1054
L +VS + L+ALT E +E+ + ERLE LGD FLK A
Sbjct: 1059 LDL------KVSPALALEALTKDSENSEEHGEEKINFKSGMGPNYERLEFLGDCFLKMAT 1112
Query: 1055 GRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA-----------ARNNLQVY--IRDQPF 1101
+F+ +E E RR + N NLL+ A ++Q+Y IR F
Sbjct: 1113 SLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKVTSADGTERDIQLYNYIRTDSF 1172
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G + R G+ + +E K H L K+IADV EA
Sbjct: 1173 SRRTWYPEGMKLLR---------------GKGVN--KSEDDWLKLTHNLGDKSIADVCEA 1215
Query: 1162 LVGAFID-------------DSGFKAATAFLKWIGIQVE-----FEASQVTNICISSKSF 1203
+GA D KA F ++ + A Q+ I+ +
Sbjct: 1216 FIGAAFQEHYKGGRWNAADWDETVKAVKLFANSPDHEMSNWADYYAAYQMPKYQIADAT- 1274
Query: 1204 LPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYL 1259
+A LDMA +E + F + LL AF HPS+ + YQRLEFLGD++LD
Sbjct: 1275 ---AAMLDMARKIEAKHPYHFKYPRLLRSAFAHPSYPYIYENIPNYQRLEFLGDSLLDMA 1331
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY--- 1316
++LY YP P LT+ ++ +V+N+ V V ++ ++ ++ +L+ I +Y
Sbjct: 1332 FITHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHVYIKQNTAILTSQIRDYVLE 1391
Query: 1317 -----------VDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
VDY +T + E P+C L D++E+ A+ +D+ F+ + V
Sbjct: 1392 AQEAERESGGAVDYWVT------ISEPPKC---LADVIEAYTAALFVDAEFDFSVV---- 1438
Query: 1366 LSFLDPILKFSNLQLNPIRELLEL 1389
F NL L P E + L
Sbjct: 1439 -------QDFFNLHLKPFFEDMTL 1455
>gi|396465578|ref|XP_003837397.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
gi|312213955|emb|CBX93957.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
Length = 1588
Score = 355 bits (912), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 405/1444 (28%), Positives = 636/1444 (44%), Gaps = 226/1444 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQ EL +A ++N I L TG GKTHIA LL+ EL H I IFL +
Sbjct: 118 RDYQTELFLRAKDQNTIAVLDTGSGKTHIATLLLRHVLEDELEHRATGGAPRIAIFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V++ + V + CG L + W+K + V+V ++L+ C+ H
Sbjct: 178 VNLVFQQANVLKCGLDQNVESICGSMGTSLWNKSTWDKHFQKNMVIVCTAEVLVQCVMHS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI M I LLIFDE HHA K+NHPYA+IMKD+Y + ++ K PRIFGMTASP+ +G S
Sbjct: 238 FITMAQINLLIFDEAHHA--KNNHPYARIMKDYYVQELNLSKRPRIFGMTASPIDVRGLS 295
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS--YVTCS 289
+ ++ ++ + LE LL AK+ +++ + + + +S P + Y P + T + +
Sbjct: 296 SD-HIKQAASDLEKLLHAKIATIDPEKLINNSISRPDEEIAVY-PRLESTHETPLHQAIK 353
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
++ +I Q S++ L + ++ S F E S L
Sbjct: 354 DKYGDITAFQKFFIASKR-----HLLELGPWASDMYWSFAFAEEQ---------SRKLQQ 399
Query: 350 GDETMRNEL-IEAEGNTIDDSLCRFASQASEVFAAICRRDGIA-SDLSCIEVLKEPFFSK 407
+E N+ ++ D + R A V + I+ SDLS
Sbjct: 400 REEFKYNKAKLDDSQQEWDAKVKRLKEAAEFVQQYTMETESISDSDLSS---------KV 450
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN--AGL 465
+LLR L R + +CIVFV + TAR L I + + + C LVGVN AG
Sbjct: 451 RLLRYWLNLYYERTDE-PRCIVFVEKRETARLLKLIFERIGG-PNLHCGMLVGVNNRAGE 508
Query: 466 KSMS-RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
+S+S RN + ++ FR GELN + AT V EEGLDI C LV+RFDL T+ ++QSRGR
Sbjct: 509 ESISLRNQILAV-SSFRRGELNCIFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGR 567
Query: 525 ARMPQSEYAFLVDSGN----QRELD------LIKNFSKEEDRMNR-EIMDRTSSDAFTCS 573
AR S+Y +++ GN QR +D +++ F + + R + D +D S
Sbjct: 568 ARHTNSKYLHMLEDGNHDHRQRVMDVRSDEVVMRQFCQSLSQDRRIDGSDEDGNDLLALS 627
Query: 574 EERI--YKVDSSGACISAGYGVSLLHRYCSKLPHDE---------FFNPKPKFYYFDDL- 621
E Y SGA ++ +S+L+ + + +P P + + L
Sbjct: 628 EILFPYYTDPKSGARLTYRSSLSILNHFIAVIPSPNRETMVQPTYIIRPATNYDPRNPLR 687
Query: 622 GGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE 681
G IC +ILP API I G +S AK A +L K G L++ LLP
Sbjct: 688 SGFICEVILPEYAPIISITGKIESKKLIAKCSAAFMMCLELRKRGYLDENLLPTLHRLAP 747
Query: 682 DEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQS-WTKSQYPVRLNFYFMQFIPDPA-DR 739
+ S+ +G P +++ S W + + V Y D DR
Sbjct: 748 ARRNALLAVSEKKKGN----------YPMLIKPSFWKQGRDTVPDQLYLTVINVDAGLDR 797
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRS--VMTKLVPSGIMQAQQFQEMFLKVILDR 797
++ GL + P + ++LA GR +++K +P+ + + EM K L
Sbjct: 798 PHQPLGLLTRRQFP---QLPSFPIYLADGRPSHIVSKSIPTVLPVPSEILEMITKFTLRI 854
Query: 798 SE--FNSEF-----------VPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSS 844
E +N ++ VP+ D +S S T ++ +D + IRR +
Sbjct: 855 YEDIYNKQYEYNIQKISYWVVPVLSDQIHKSPSGTNI--------EDMLDMEQIRRVYKN 906
Query: 845 PVFGT-----PGGSVDRKSL-PSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVF 898
P + P +D+ + P +G + ++ + V A K N +
Sbjct: 907 PTWDWTPTVYPEDLIDKYYIDPMNGGRRYYSNCIASHLTPQDPVPAHVPKQNQKYMNTIL 966
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHE 958
+ S + S +S D P QP+L + + RN H ++E+ E E
Sbjct: 967 DYTD-SRWARSRDTSRWD------------PSQPVLEVEKIPFRRN--HLARVEEKEQKE 1011
Query: 959 LEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAE 1018
L E + + P+ LKI + +LP+I+HR E+ L+A++ +L
Sbjct: 1012 LFELKNYVCPQ--PLKISNIATPFVVMCYVLPAIIHRFESYLIALDACEVLD------LH 1063
Query: 1019 VSAEMLLKALTT------EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDT 1064
VS + L+ALT E +E+ + ERLE LGD FLK A +F+
Sbjct: 1064 VSPALALEALTKDSENTDEHEEEKINFKSGMGPNYERLEFLGDCFLKMATSLSVFVQQPE 1123
Query: 1065 VDEGELTRRRSNAVNNSNLLKLA------ARNN-------LQVYIRDQPFDPCQFFALGR 1111
+E E RR + N NL++ A AR + L Y+R + F
Sbjct: 1124 ENEFEYHVRRMLMLCNQNLMETAIGVKKVARPDGTEINLELPKYVRTEAF---------- 1173
Query: 1112 RCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG-AFIDD- 1169
R E + I + ++ DD K H L K++ADV EA +G AF++
Sbjct: 1174 -SRRTWYPEALKLIRGKGINKSEDDW------LKLRHNLGDKSVADVCEAFIGAAFMEHH 1226
Query: 1170 -------SGFKAATAFLKWIGIQVEFEASQVTNI---CISSKSFL--PLSASLDMA-TLE 1216
S + A +K + + T+ + K L P +A LD A +E
Sbjct: 1227 KHGLWIPSQWDLAVKAVKLFANNPDHSMEKWTDYYAAYVKPKYQLDQPTAAMLDAARQIE 1286
Query: 1217 ILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
+ + F + L+ AF HPS+ + YQRLEFLGD++LD +LY YP P
Sbjct: 1287 AVHPYHFKYPRLVRSAFTHPSYAYMFEHIPNYQRLEFLGDSLLDMAFIMHLYYKYPDKDP 1346
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY--------------VDY 1319
LT+ ++ +V+N+ V V +++ L ++ +LS I +Y VDY
Sbjct: 1347 QWLTEHKTPMVSNKFLGAVCVKLGWHRHLKSNTAILSTQIRDYVLEIDEAEREANGAVDY 1406
Query: 1320 MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSN 1377
+ V E P+C L D++E+ + A+ +DS F+ + V SF D LK F++
Sbjct: 1407 WVN------VHEPPKC---LADVIEAYVAALFVDSQFDFSVV----QSFFDRHLKPFFAD 1453
Query: 1378 LQLN 1381
+ L+
Sbjct: 1454 MTLD 1457
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 352 bits (902), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 287/978 (29%), Positives = 452/978 (46%), Gaps = 149/978 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPTVALV 118
R YQ ++ + A N I L TG GKT IA++LI E+ ++ +K IFLAPTV L
Sbjct: 1078 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHL- 1136
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
Q KVI++S GF+V + G + S WEKEI +++VLVM PQILL L F+ +
Sbjct: 1137 --QFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSL 1194
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
+ L+I DECH A NHPY KIMK
Sbjct: 1195 XTVCLMIVDECHRA--TGNHPYTKIMK--------------------------------- 1219
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVIN-DTSSSYVTCSEQLAE 294
+Y++ED +LE F+ S + R Y N D + + +
Sbjct: 1220 -------------IYTIEDRTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDN 1266
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
+ S +++ L+ K+L+ H + +CL++LG+ A A + + E +
Sbjct: 1267 LLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVKVCI---ENV 1323
Query: 355 RNELIEAEGNTIDDSLCR-FASQASEV-------------FAAICRRDGIASDLSCI--- 397
N E E S C+ F + + AA+ D + S+
Sbjct: 1324 SNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHVLHKMSLAAVDELDSLVSEQQGFFFG 1383
Query: 398 ---------------EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSY 442
+ L F + LI L R+ + + C++FV RI+TA+ +
Sbjct: 1384 EWKTFFLEHKGFERGDPLPPNLFFVVMEALIVFLE--RVARKVLCLIFVERIITAKVIER 1441
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
++ + +L+ + +L G N+ + +++ A + LE FRSG++NLL AT V EEG+ +
Sbjct: 1442 FIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPN 1501
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN--QRE--LDLIKN-FSKEEDRM 557
C VIRFDLP+TV S++QSRGRAR S++ +++ GN QR+ D+I++ +S +
Sbjct: 1502 CSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTAT 1561
Query: 558 NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
NR+ D + A+T E Y VDS+GA ++A VSL+HRYC KLP D++F PKP F++
Sbjct: 1562 NRD-PDGYTLKAYTIEEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKP-FFH 1619
Query: 618 FDDLGGTI-CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQE 676
F L G C + LP NA I+G + +K+ CL+A + LH++GAL+D+LLP
Sbjct: 1620 FTYLEGMYECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYV 1679
Query: 677 DNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDP 736
+ +E++ ++ S S + G R ELH L +W Y + F +
Sbjct: 1680 EEPSENDIIVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNI 1739
Query: 737 ADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQE 788
+ +Y F L ++S L + +++++L+L + V T + G +M+A F E
Sbjct: 1740 VNELYSGFVLLIESKLDDDVGNIEMELYLI-SKFVRTSVSSCGQVSLDAEQVMKAMXFHE 1798
Query: 789 MFLKVILDR-------SEFNSEFVPLGKDDYCESSSSTFYLLLPV----IFHKNS--VDW 835
+F + R S EF+ L SSS YLLLP+ I S ++W
Sbjct: 1799 LFFNSLFGRLFIGSKSSGVRREFL-LNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINW 1857
Query: 836 KIIRRCLSSPVF------GTPGGSVDRKSLPSH-------------GPLQLHNGWSSESD 876
I C S F + G D PS + L N ++
Sbjct: 1858 PGINSCASVVEFLEKRSQLSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSVHVNN 1917
Query: 877 VENSLVYATHKKWFYLVTNIVFEKNGYSPY------KDSDSSSHVDHLISSYGIHLKHPK 930
++N +V A H Y + ++V + + SP+ S+ ++ ++ + YGI L +P
Sbjct: 1918 LKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPG 1977
Query: 931 QPLLRAKPLFRLRNLLHN 948
QPLL K NLL N
Sbjct: 1978 QPLLLLKQSHNAHNLLVN 1995
>gi|158706448|sp|Q0UI93.2|DCL1_PHANO RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1522
Score = 350 bits (898), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 397/1473 (26%), Positives = 639/1473 (43%), Gaps = 244/1473 (16%)
Query: 23 ATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTG 82
ATS + E +++ + +++V R YQ+EL +A +N I L TG
Sbjct: 41 ATSKIANEGQLSIRDILASQDTAVRITN--------PRDYQMELFLRAKMQNTIAVLDTG 92
Query: 83 CGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFC 137
GKTHIA LL+ EL + + + FL +V LV QQA V+ + V
Sbjct: 93 TGKTHIATLLLRHVLEEELENRAKGCAHKMAFFLVDSVNLVFQQANVLRCGLDQGVEGIS 152
Query: 138 GG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSN 196
G + L W+K V+V Q+L+ C+ H F+ + + LLIFDE HHA KSN
Sbjct: 153 GAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMHSFMSISRMNLLIFDEAHHA--KSN 210
Query: 197 HPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
HPYA++MKD+Y + D K PRIF MTASPV KG SA+ ++ ++ LE LL +++ +
Sbjct: 211 HPYARVMKDYYAHELDTSKRPRIFAMTASPVDVKGQSAE-HVREAARELETLLHSRIATT 269
Query: 255 EDAEDLESFVSSPVVRVYQYGPVINDTSSS-YVTCSEQLAEIK--REQYISALSRKLHDH 311
D+ + ++ P V Y + N+ + + + ++ R+ +I+A KLH
Sbjct: 270 SDSALARNSITRPEEEVAVYTRLRNEFETPLHQKVKAKYGDVAPFRKLFITA---KLH-- 324
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
+L R M + DE R I E + +
Sbjct: 325 ------ASELGRWASDMYWSFA---------------FADEQSRKLQIREE---LKYNRS 360
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEV----LKEPFFSKKLLRLIGILSTFRLQQHM-K 426
+ A+E+ A + R + + E+ L E S K+++L L+ + + + +
Sbjct: 361 KRDWSAAELDAQMARLKEATAFVQQYEIGAPTLSEQDLSSKVMKLQYWLNLYYERTTLAR 420
Query: 427 CIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGE 484
CIVFV + TA+ L I ++ + C LVG+N AG +++S + L+KFR GE
Sbjct: 421 CIVFVEKRHTAQLLKLIFDHIGG-PNLHCDVLVGINNRAGEENVSLRSQILTLQKFRRGE 479
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
LN L AT V EEGLDI C LV+RFDL T+ ++QSRGRAR S+Y ++++ N+
Sbjct: 480 LNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGRARHRNSKYLHMLEAENKEHT 539
Query: 545 DLIKNFSKEEDRM---------NREIMDRTSSDA-FTCSEERI---YKVDSSGACISAGY 591
+ + N +E+ M +R++ D A E+++ Y + SGA ++
Sbjct: 540 ERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAELIALEDKLFPSYTDEKSGAKLTYRS 599
Query: 592 GVSLLHRYCSKLP---HDEFFNP----KPKFYYFDD-----LGGTICHIILPANAPIHQI 639
+S+L + + P H+ P PK DD G +C +ILP + PI +
Sbjct: 600 SLSILSHFVATYPSPDHNTMAQPTYVVNPKIS--DDPRDPQRNGFVCEVILPEHCPIISM 657
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGS 699
VG S AK A K +L + LN++LLP T + + ++ E
Sbjct: 658 VGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLP-----TISKYLPAMRNALLAVSEKK 712
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHL 759
+G ++ P +Q + P L+ + DR ++ + + P +
Sbjct: 713 KGNYAMVIKPTFWKQD--RDTVPESLHLTIID-ADRGLDRPHQPLAMLTRRPFP-QLPSF 768
Query: 760 KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE--FNSEFVPLGKDDYCESSS 817
+ L R +++++ + I + EMF + L E +N + DY S
Sbjct: 769 PIYLTDCRPSNIVSQSLHIPISLTPELLEMFTRFTLRIFEDIYNKVY------DYDVSKM 822
Query: 818 STFYLLLPVIFHKNS-----------VDWKIIRRCLSSPVFGTPGGS-----VDRKSL-P 860
S Y +LPVI H+ + +D IR+ + P + S +DR + P
Sbjct: 823 S--YWMLPVIEHRVASVRSMSNPQEVLDMDQIRKVYNEPFWKWSPQSRTDDLIDRYFVDP 880
Query: 861 SHGPLQLHNG-----WSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHV 915
+G + ++ + V ++ HK + NI+ + DS
Sbjct: 881 MNGGRRYYSDRLAPHLKPQDPVPANVPRQNHK----FMKNIL-------DFSDSK----- 924
Query: 916 DHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKI 975
+ S I H QP+L+ + + RN L N +ED E EL + PE L I
Sbjct: 925 --WMKSRDITRWHQDQPVLQVEKIPFRRNHLAN--VEDKEKKELANLETYICPE--PLHI 978
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT----- 1030
+ +LP+I+HR E+ L+A++ +L +VS + L+ALT
Sbjct: 979 SNLATPFVVMCYVLPAIIHRFESYLIALDACDVLD------LKVSPALALEALTKDSDNS 1032
Query: 1031 -EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
E +E+ + ERLE LGD FLK A +F+ +E E RR + N
Sbjct: 1033 EEHGEEKINFKSGMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQ 1092
Query: 1082 NLLKLA-ARNNLQVYIRDQPFDPCQFFALGRRCPRICS-KETERTIHSQYDGRAPDDLNA 1139
NL++ A + L Y+R F ++ G + R K+TE D LN
Sbjct: 1093 NLMETAVGKKKLYKYVRTDAFSRRNWYPEGLKLLRGKGLKKTEE-----------DWLNV 1141
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVG-AFID------------DSGFKAATAFL------- 1179
H L K++ADV EA +G AF+ D KA F
Sbjct: 1142 T-------HNLGDKSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLM 1194
Query: 1180 -KWIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPS 1237
KW + + + + LD+A +E+ ++F + LL AF+HPS
Sbjct: 1195 EKWTDYYAAYTKPKYQTAGAT-------ATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPS 1247
Query: 1238 FNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
+ YQRLEFLGD++LD +L+ YP P LT+ ++ +V+N+ V V
Sbjct: 1248 QPFMWENIPSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCV 1307
Query: 1295 DQSFYKFLIFDSNVLSETINNY--------------VDYMITPSSTREVKEGPRCPKVLG 1340
++ + ++ +LS I +Y VDY ++ V E P+C L
Sbjct: 1308 KLGWHTHMKQNTAILSSQIRDYVYEVEEAEREANGAVDYWVS------VSEPPKC---LA 1358
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
D++E+ + AI +DS F+ N V K L P
Sbjct: 1359 DVIEAFVAAIFVDSEFDFNVVQKFFDLHLKPFF 1391
>gi|303314275|ref|XP_003067146.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106814|gb|EER25001.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1487
Score = 348 bits (893), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 397/1407 (28%), Positives = 608/1407 (43%), Gaps = 228/1407 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQLEL +KA ++NII L TG GKT IAVLL L H+I KP + + F
Sbjct: 100 REYQLELFEKAKKDNIIAVLDTGSGKTLIAVLL---LKHIIEQELIDRSAEKPHR-VSFF 155
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V LV QQA V++ +I +V FCG + L + WE+ + + V+V ++L C
Sbjct: 156 LVDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQC 215
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGK 228
L H F+KME I LLIFDE H+A K +HPYA+I+KDFY D K P+IFGMTASPV
Sbjct: 216 LLHAFVKMENINLLIFDEAHNA--KKDHPYARIVKDFYLKDGNAKRPKIFGMTASPV--- 270
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
A+ ++ K+ +LE LL++++ + + L V+ P V+ Y +
Sbjct: 271 --DAKVDVVKAARNLETLLNSQIATASNLSLLRQSVARPNEEVWSYDRL----------- 317
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL- 347
+Q E + ++ LR+ L L F L+ GA A ++
Sbjct: 318 -DQPFETRL-------------YKELRSRFGDLRALEKLFTFSLKASSNLGAWCADWVWS 363
Query: 348 --LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ + + E A + + + +E+ + I S ++
Sbjct: 364 YALTEESLPKLEGRAARTAMGNLPIAKIVRPEAEIQRIREASEIIRSHKFGDPAIRPELL 423
Query: 406 SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV--- 461
S K+ RL +L F KCIVF + TAR L + + R L+GV
Sbjct: 424 SPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSKIG-TKHLRPGVLIGVRSD 482
Query: 462 -NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ G+ R + +++ FR GE+N L AT V EEGLDI C L++RFDL T+ +IQ
Sbjct: 483 ASGGMNISFRQQVLAVV-SFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQ 541
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDLIKNF--SKEEDRMNREIMDRTSSDAFTCSE--ER 576
SRGRAR S ++ +Q +++K F S +DR I++ DA + +
Sbjct: 542 SRGRARHMNSTTCLIITCKSQ---EIMKRFCISLPKDR----ILNSNDVDALYEGDRNRK 594
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPI 636
Y V ++GA ++ + +L + + L +++ + +Y+ +C ++LP +PI
Sbjct: 595 CYTVQTTGAKLTYNSSLVVLAHFANSLQYEKETSTVVSYYHRFTKNAFVCEVVLPEKSPI 654
Query: 637 HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDEPMLFSS 689
IVG P S AK+ A + L K G L+D+ LP NA + S
Sbjct: 655 RGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFVSTYHKRLPAMRNA---RLAISSK 711
Query: 690 DSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDP-ADRIYREFGLFV 748
S+ Y +M V L ++ ++ P LN + F R Y L
Sbjct: 712 KSNQY----------DMKVKPKLWET-SRGIIPTSLNIVVLGFRSRRLLHREYHPLVLLT 760
Query: 749 KSLLPGEAE---HLKVDLHL-ARGRSVMTKLVPSG-------IMQAQQFQEMFLKVI-LD 796
+ LP E +L+ D+ S+++ SG + FQ++F KV D
Sbjct: 761 REKLPHFPEFPLYLEDDIECDVICSSIISGFQVSGHDLEVLTTFTLRIFQDIFHKVYDRD 820
Query: 797 RSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDR 856
PL C+ SSS ++ +DW I++ +P
Sbjct: 821 VGMMTYWLAPLNLS--CDISSSA---------SRDLLDWGILQFVFDNP----------- 858
Query: 857 KSLPSHGPLQLHNGWSSESDV---ENSLVYAT-HKKWFYLVTNIVFEKNGYSPYKDSDSS 912
+P WSS + N VY + ++ Y I P S +
Sbjct: 859 -EIP----------WSSSNSAAFFANRFVYDRWNGRYRYFTHGIDPSLRPSDPPPSSMAR 907
Query: 913 SHVDHLISSYGIHL-KHPKQPLLR----AKPLFRLRNLLHNRKLEDSESHELE----EYF 963
I Y + L K+ ++ L +P+ + + R L D +++ + +Y+
Sbjct: 908 RRHMGNIMDYCLSLFKNARKKFLENCDWTQPVIKAEIIQLRRNLLDKRTNKEKIKEGDYY 967
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
L P L I + + P+I+ R+E+ L+A+E L +S E+
Sbjct: 968 ICLEP----LTISAIPASVAAFAFAFPAIISRIESYLIALEACQELDLP------ISPEL 1017
Query: 1024 LLKALTTE-------KCQERF-------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
L+ALT + + Q+ + ERLE LGD FLK A LF ++ DE +
Sbjct: 1018 ALEALTKDSDNTDEHRAQQIHFQRGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYD 1077
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY 1129
+R V N NL K A R L +IR Q F ++ G T Q
Sbjct: 1078 FHVKRMCLVCNQNLFKTAVRFKLYEFIRSQSFSRRGWYPEGL---------TLLQGKGQS 1128
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DDSGFKAATAFLKW 1181
G ++ H L KTIADV EAL+GA D KA TA
Sbjct: 1129 KG-----------ATENKHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTAL--- 1174
Query: 1182 IGIQVEFEASQVTNICISSKSF-LP--LSASLDMATLEIL------LGHQFLHRGLLLQA 1232
V + V N S+ + LP +A +D A L++ LG+ F + LL A
Sbjct: 1175 ----VSSDDHNVLNWEQYSRLYSLPKYQTAVVDAAELDLAAQVKKKLGYVFKYPKLLRSA 1230
Query: 1233 FVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
F HPS+ CYQRLEFLGDA+LD ++Y +P P LT+ + +V+N+
Sbjct: 1231 FTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFL 1290
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRC-------PKVLGDL 1342
+VAV + L S L I NYV+ + ++ E + P PK L D+
Sbjct: 1291 GSVAVRLGLHSHLNHFSTSLQSQITNYVEEI--EAAELESGDSPDAWTLTSDPPKCLPDM 1348
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFL 1369
VE+ +GAI +DS F+ V + FL
Sbjct: 1349 VEAYIGAIFIDSNFSFEVVEEFFQKFL 1375
>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1496
Score = 348 bits (892), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 372/1411 (26%), Positives = 620/1411 (43%), Gaps = 193/1411 (13%)
Query: 48 AQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI 107
AQ D + + R+YQ E+ +A E N+I L TG GKT+I+ LLI +A K I
Sbjct: 2 AQFQDVNEALLPRRYQEEIFSRAQERNVIAALDTGSGKTYISTLLIKWIAARDAGLGK-I 60
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQIL 166
+FL P VALV+QQ I +V G + + W KEI+ ++VLVM QI
Sbjct: 61 IVFLVPKVALVEQQGDFIARETPLRVSKCYGATAIDMTDRRGWRKEIELHDVLVMTAQIF 120
Query: 167 LYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVV 226
L L H M+ ++L++FDECHH + NH Y IM+++++ K P++FGMTASP+
Sbjct: 121 LNILTHSHWTMDKVSLMVFDECHH--TRKNHAYNGIMREYFQWTSEKRPKVFGMTASPIW 178
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSP--VVRVYQYGPVINDTSS 283
+ + S+ +LE LDAKV +V E E+L P V+R YQ P+ T
Sbjct: 179 NPRDAVE-----SLATLERNLDAKVIAVREHVEELADHSPRPQEVLREYQASPI---TYP 230
Query: 284 SYVTCS--EQLA--------EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE 333
Y + +LA +I E+ + H SL +L HD +K +
Sbjct: 231 HYPATNLWARLALDSLPPSFDIPVEKVRTRFEVTYH---SLGPYGAELFLYHD-IKHRIA 286
Query: 334 NLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFA---SQASEVFAAICRRDGI 390
H Y+ T + ++ EG + L Q S+ F D +
Sbjct: 287 QFISQAEDHMEYM-----NTTHLDGVQPEGIQLPPELAHMELVLQQFSDFFDNEDDPDTV 341
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
+ LK + S K++ L +L + +Q+ + I+FV + A LS +L + L
Sbjct: 342 PIRID----LK--WCSPKVVLLSQLLFEY-YKQNFQGIIFVEQRHVAACLSKMLPRIPPL 394
Query: 451 ASW-RCHFLVGVNAG------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTC 503
+ + L+G A ++ M+ + + ++ FR GE NLLVAT V EEGLD C
Sbjct: 395 ELYFKSAQLIGHGASSVQKSQVRGMALKSQQEAVKMFRDGECNLLVATSVAEEGLDFPAC 454
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM-----N 558
LV+RFD + + +IQSRGRAR + + +V G +D K FS+ E ++ N
Sbjct: 455 ELVVRFDPIQHMVGYIQSRGRARQKAATFMVMVQEGQASHVDRYKAFSESEPQLRLVYQN 514
Query: 559 REIMDR-----------TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDE 607
RE + + D +E Y V ++GA ++ + LL+ CS +P D
Sbjct: 515 REDLPKPVQDDELEEGEEREDPLDLAERERYVVPNTGAILTYNTAIGLLNHLCSLIPRDR 574
Query: 608 FFNPKPKFYYFDDLGGTICHIILPANAPIHQ----IVGTPQSSMEAAKKDACLKAIEDLH 663
F P Y D T+ LP++ P+ + G + + + AK+ A A++ LH
Sbjct: 575 -FTPIHLPQYSGDFEATLQ---LPSSLPLPKEHLTFTGPTKRTKKEAKRAAAFMAVKRLH 630
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE--GSRGELHEMLVPAVLRQSWTKSQY 721
+LG ++YLLP + D+D +G G + +M+ ++R WT+ Q
Sbjct: 631 ELGVFDNYLLPARSA---------TGDNDDADGRPIGDVSHVPDMM-DVIVRDPWTRGQ- 679
Query: 722 PVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD-LHLARGRSVMTKLVPSGI 780
+L + ++ PA GL S+LP + L D +H++ + + +
Sbjct: 680 --KLWLHVVRLDGRPAA------GLITGSILPSGS--LVCDGVHVSTDEAQLAEFDEEDE 729
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFY----LLLPVIFHKNSVDWK 836
+ ++ E F+++ L +C + L+P+ H+ +VDW
Sbjct: 730 WEQRRQLEDFMRMGL---------------WWCITGRGITLPLTCFLVPLT-HELAVDWH 773
Query: 837 IIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS--SESDVENSLVYATHKKWFYLVT 894
I L+ P FG WS E LV ++ + L+
Sbjct: 774 AIELALAHP-FGV-------------------GDWSMVGEEHYNTLLVMSSKEHGRPLLL 813
Query: 895 NIVFEKNGYSPY-------KDSDSSSHVDHLISSY---GIHLKHPKQPL-LRAKPLFRLR 943
+ +N +P +++ S+ + IS Y G+ + P+Q + P R
Sbjct: 814 KRI--RNDLTPLSVPPAGTREAAGKSYREFYISKYTRKGVPPEIPEQGYCVEVVPFPRHT 871
Query: 944 NLLHNRKLEDSESHELEEYFDDL-PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
+ ++N +++ + + P LC+ + S D+ +L +LP + HRL +L A
Sbjct: 872 STVYNLDGSSVPANKTQPLGAHIYPMSLCRWAPL--SPDVYRALRVLPELTHRLTDLYRA 929
Query: 1003 IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH 1062
++ L + +++++ALT F+ +RLE LGD+ LK HLF
Sbjct: 930 RAIRAELGLP-----PIQDDLMIQALTLPSANAGFNNQRLETLGDSVLKLCTVVHLFNRF 984
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
EG+L R N+V+N LL A L+ Y+ +P +T
Sbjct: 985 PHRHEGQLDILRRNSVSNRTLLARAKEVMLEQYLTSEP-------------------QTM 1025
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWI 1182
R G DL+ + + K+++ D +EA +GA G A +
Sbjct: 1026 RIWRFALSGEV--DLSDPMPDRFVSRRIPKRSLQDCMEASLGAGFATGGIMMALH----V 1079
Query: 1183 GIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR-L 1241
G + + ++ +LG++F LL++A HPSF
Sbjct: 1080 GTALGLGFGGTLLWPARYDRLPETPVPVMFHEVQEILGYEFKSGHLLIEAVTHPSFRSPT 1139
Query: 1242 GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYK 1300
YQRLEF+GDA++D ++ YLY+ +P GQL+ RS V A A++AV+ ++
Sbjct: 1140 NSSYQRLEFMGDALIDLVVMRYLYNKFPTATSGQLSWARSRAVCAPALAHIAVNVLGLHR 1199
Query: 1301 FLIFDSNVLSETINNYVDYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGFNL 1358
L+ ++ LS I+ YV + S + G + PK + D++ES LGA+L+D+ +N
Sbjct: 1200 PLLINNIELSMAISKYVPILQETSEEEIIHSGWKHDPPKAISDVLESILGAVLVDTHYNF 1259
Query: 1359 NTVWKIMLSFLDPILKF--SNLQLNPIRELL 1387
I + L +L+ ++ +P+ EL+
Sbjct: 1260 EKTAVIAENALRGLLRVLSPDMPRDPVSELM 1290
>gi|302755618|ref|XP_002961233.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
gi|300172172|gb|EFJ38772.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
Length = 1291
Score = 346 bits (888), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 259/899 (28%), Positives = 412/899 (45%), Gaps = 127/899 (14%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVALVQQ 120
YQLE+ +K ++EN IV+L TG GKTHIA +L +LA + P+ K I +FL PTVAL Q
Sbjct: 2 YQLEVLEKVLKENTIVFLETGAGKTHIAAMLFNKLADRLSMPEEKRIGVFLTPTVALADQ 61
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QA VI S KV + GG W +EID ++VLVM Q+L L I+ME+I
Sbjct: 62 QANVISSSTRLKVGIYHGGQMDTWDVRKWSEEIDSHQVLVMTAQVLFNSLQLSAIRMEMI 121
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
+LIFDECH AQ +NHPYA +MK
Sbjct: 122 EVLIFDECHRAQ--NNHPYASVMK------------------------------------ 143
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQY 300
+Y++ +LE V +P R Y + ++ L ++ Y
Sbjct: 144 ----------IYTITSRAELEEKVPTPFYRNLYYDKAHHCFKELRRCLTDLLDKVNVIVY 193
Query: 301 ISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGA-----LH-----ASYILLSG 350
+ D R+ + + L++++ CL +LG+ A LH A +LL
Sbjct: 194 L--------DENKKRS---KFSNLYNAITSCLLDLGLWSAVLVKKLHFLAVLAVEVLLKI 242
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLS---CIEVLKEPFFSK 407
D +E E + RF +A + + D ++S S + + +
Sbjct: 243 DPEGTKPSVENEDKNDEQ---RFLKEAYNILKSFVPGDSVSSISSPEDAKKAVNSGLITS 299
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
K+ L+ IL +R + +C++FV R+V + L+ +L K + R ++VGV A
Sbjct: 300 KVKALLKILVRYRNVEPFRCMIFVERVVVTQVLARLLSTFKAIDFCRTGYIVGVTA---- 355
Query: 468 MSRNAMKSI--LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
N K + ++ F+SGELN+L+ T V EEGLD+Q+C V+RFD+ T+ SFIQSRGR
Sbjct: 356 -DGNTTKHVETVKAFKSGELNVLICTSVAEEGLDVQSCNCVVRFDICRTLRSFIQSRGRG 414
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVD---- 581
R + Y FL++ GN + L+ E+ M E + R S T + D
Sbjct: 415 RKRDATYMFLLERGNLEQESLLMELVNSEELMRAEALSRMSK---TIEITPLIDADLDFF 471
Query: 582 --SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF----DDLGGTICHIILPANAP 635
+SGACIS VS ++RYCS+LP D F+NPKP+ D+ C I P NAP
Sbjct: 472 YTTSGACISTDGAVSFIYRYCSQLPGDRFYNPKPEIEVTKCESDNEELFSCTITFPPNAP 531
Query: 636 IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ--EDNATEDEPMLFSSDSDS 693
+H + G P+ + + AKK ACL+A L LGAL + P+ E+ + P L
Sbjct: 532 LHVLTGLPKRNKQLAKKVACLEACRQLDALGALGERHPPEVREEKMASEGPGL------- 584
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLP 753
G EL + ++ W + + L+ Y + F P+ Y FGL + L
Sbjct: 585 --GSTKLKELFPSIKSTTYQRQWITTSTDIVLHIYALIFHPEENGSTYTNFGLLFDAALD 642
Query: 754 GEAEHLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSE-- 803
+ +++V+L+L + R+V KL +G + A+ +QE+ R F +
Sbjct: 643 DDVGNIEVNLYLTKNRAVKAKLSSAGQRRVDSVQLAAAKAYQEIMFNGAFSRLVFREDKN 702
Query: 804 -----FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCL-SSPVFGTPGGSVDRK 857
L + S YLLLP++ +DW I+ RC ++ + + +++
Sbjct: 703 DRTLATCLLSSTEKANELWSETYLLLPILDGSCDIDWNIVTRCADAAKLLPSLCSELNKT 762
Query: 858 SL----PSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSS 912
+ P G + +G S +++++V H + + ++ + S +K+++ S
Sbjct: 763 EVCMERPDTGLIYTASGPVSPGALQDAVVLTVHTGKLFSIVEVLEDLGAQSTFKENEES 821
Score = 263 bits (672), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 241/444 (54%), Gaps = 35/444 (7%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A T+ +CQ+ FS E LE+LGD+ LKYAV R L+LLH T+ EGEL+ RRS+A+ NS L
Sbjct: 851 ILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNSTL 910
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG--RRCPRICSKETERTIHSQYDGRAPDDLNAEV 1141
KLA +L +Y+RD+PF P + G R+ R C + + + P D V
Sbjct: 911 RKLAVAQDLPMYVRDEPFYPSCWVGAGMYRQRSRKCCCRLDNLVTKESSKPRPTDATYYV 970
Query: 1142 --RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICIS 1199
C +GH W+ KT +D +EAL+GA+ GF A F+K + + V+F++ I S
Sbjct: 971 GKTCGQGHRWMCSKTTSDALEALIGAYAVGGGFDGALEFMKALQVDVDFDSGL---IAAS 1027
Query: 1200 SKSFLPLSASL----DMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAV 1255
+PL A + +LE L + F ++ LLL+A H S CYQRLEF+GDAV
Sbjct: 1028 QHRPVPLDAVQFHMPALLSLEKELCYTFQNKALLLEAITHASTPDTVFCYQRLEFIGDAV 1087
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
LD+L+T +L++ +P L PG L+DLRS VNN A VAV + +L S L I +
Sbjct: 1088 LDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAELRAKITS 1147
Query: 1316 YVDYMITPSSTREVKEGPRC-----------PKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
++D + P C PK L D+VES GAIL+DSGF+ +W +
Sbjct: 1148 FLDVL---------DRDPECSVMFGFKALSGPKALADIVESVAGAILVDSGFDFEKLWVV 1198
Query: 1365 MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS 1424
+ L P + + L +P+RE ELC+ + ++ G A A++ K + +
Sbjct: 1199 LKRLLSPFVTPATLSFHPVREFHELCSYKSWEFEWVQSSSG----ATAEILLKAGEQRFT 1254
Query: 1425 ACATNLSRKEAIRIASQQLFSKLK 1448
++ ++K+A + +++L + LK
Sbjct: 1255 EVSSIKNKKDARKDVAEKLLTMLK 1278
>gi|452003006|gb|EMD95463.1| hypothetical protein COCHEDRAFT_1026333 [Cochliobolus heterostrophus
C5]
Length = 1592
Score = 344 bits (883), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 404/1473 (27%), Positives = 616/1473 (41%), Gaps = 283/1473 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R YQ EL ++A EN+I L TG GKTHIA LL+ EL H R + FL +
Sbjct: 118 RDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVLDMELDHRARGGIPRMAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V+ + V CG L S W+ D+ ++V ++L+ C+ H
Sbjct: 178 VNLVFQQANVLRCGLDQNVEGICGSMGASLWSKSTWQSYFDKNMIIVCTAEVLVQCMMHS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
F+ M I LLIFDE HHA KSNHPYA++MKD+Y + D+ + PRIFGMTASPV KG S
Sbjct: 238 FMTMSQINLLIFDEAHHA--KSNHPYARLMKDYYLQEIDVSQRPRIFGMTASPVDTKGLS 295
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A + E A +LE + S + + N S E+
Sbjct: 296 AD------------------HIKEAARNLEKLLHSKIATTAESTLASNSISRP----DEE 333
Query: 292 LAEIKR--EQYISALSRKLHDHQSLR---NTTKQLNRLHDSMKFCLENLGVCGA-LHASY 345
+A R E+Y + L HQ +R + ++ + K LG + ++ S+
Sbjct: 334 VAMYPRLQEEYETPL------HQKIRARFGDIRAFDKYFLASKRHGRELGRWASDMYWSF 387
Query: 346 ILLSGDETMRN----ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE--- 398
+ DE R E ++ N D + E A + R A +
Sbjct: 388 VFT--DEQSRKLEQRERLKHSKNRPD--------EVKEWDAKVKRLQEAAEFVQQFNFGA 437
Query: 399 -VLKEPFFSKKLLRLIGILSTF-RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH 456
L + S K+ +L L+ + +CIVFV + TAR L I + RC
Sbjct: 438 CTLSDQDLSSKVQKLYYWLNLYYERSDEARCIVFVEQRQTARLLQLIFSQIGG-PHLRCS 496
Query: 457 FLVGVNAGLKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
LVG+N + + IL KFR GELN L AT V EEGLDI C LV+RFDL T
Sbjct: 497 VLVGINTSEHEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRT 556
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR-----------EIMD 563
+ +++QSRGRAR S+Y +++ GN + + + +E M R + D
Sbjct: 557 MIAYVQSRGRARHRNSKYLHMIEEGNHDHRERVMDVKLDEQVMRRFCRELPQDRHIDEYD 616
Query: 564 RTSSDAFTCSEERIYK--VDSSGACISAGYGVSLLHRYCSKLPH-DEFFNPKPKFYYFDD 620
S D T E+++Y + GA +S +++L+ + + LP D +P + D
Sbjct: 617 NDSMDLLTF-EDQLYPSFITKLGAKLSFRSSLAILNHFVATLPGPDRQTMLQPTYVVCPD 675
Query: 621 LG---------GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
L G + +ILP ++PI+ I+G QS AK A KA +L+K G L+D
Sbjct: 676 LNYDGLDAQRRGFVSEVILPEHSPINTIIGDVQSKKAIAKCSAAYKACLELYKKGYLDDN 735
Query: 672 LLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQ 731
LLP T + ++ GE +G ++ P + W + V + +
Sbjct: 736 LLP-----TTIRRLPAGRNALLALGEKKKGRYSMLIKP----EFWQAGRGLVPASLFLTV 786
Query: 732 FIPDPA-DRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMF 790
D DR ++ G ++ LP E ++L GR + +V M +
Sbjct: 787 VDLDAGLDRPHQPLGFLTRNQLPRLPE---FPIYLTDGRP--SNIVSRSSMVSLPVSAEV 841
Query: 791 LKVI------LDRSEFNSEF-----------VPLGKDDYCE-SSSSTFYLLLPV-----I 827
L++I + + +N EF VP+ D SS +TF +L + +
Sbjct: 842 LEIITVFTLRIYKDIYNKEFEKNAQNMSYWVVPVHSDRVSSLSSVTTFDQILDMDQLRRV 901
Query: 828 FHKNSVDWK--IIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYAT 885
FH+ + W L + F PG R P + V L
Sbjct: 902 FHEPTWRWTPDTTPDDLMNRYFVDPGNGGRRYYSERFAP-----HLKPQDPVPKGLSRQG 956
Query: 886 HKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNL 945
HK +++I+ Y DS + + + L + QP+L+A+ + RN
Sbjct: 957 HK----FMSSIL-------DYSDSTWTRNRNILKWNQS-------QPVLQAERIPLRRNQ 998
Query: 946 LHNRKLEDSESHELEEYFDDLPPELC--QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
L + +ED E + F +L +C I + +LP+I+HR E+ L+A+
Sbjct: 999 LAH--IEDKEKGD----FSNLKIYICPEPFHISNLATPFVVMCYVLPAIIHRFESYLIAL 1052
Query: 1004 ELKHLLSASFPEGAEVSAEMLLKALTT----------EKCQ---------ERFSLE---- 1040
E +L +V+ + L+ALT EK ER+ E
Sbjct: 1053 EACSVLE------LKVNPALALEALTKDSENSEEHDEEKINFKSGMGPNYERYGYELRMN 1106
Query: 1041 --------RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN-- 1090
LE LGD FLK A +F+ +E E RR + N NL++ A N
Sbjct: 1107 GFKLTLGLSLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLMETAVGNKK 1166
Query: 1091 ---------NLQV--YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
+LQ+ YIR + F ++ G R + + ++ DD
Sbjct: 1167 VVSPEGTEKDLQLYKYIRTESFSRRTWYPEGLRL-----------LKGKGANKSQDD--- 1212
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFID-------------DSGFKAATAFL------- 1179
K H L K+IADV EA +GA + D KA F
Sbjct: 1213 ---WLKLTHNLGDKSIADVCEAFIGATLQEHYTGDRWRPNDWDEAVKAVKLFANSPDHTM 1269
Query: 1180 -KWIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPS 1237
KW +EA Q + S +A LDMA +E+ + F + LL AF HPS
Sbjct: 1270 SKWSDY---YEAYQKPKYQTAEAS----AAMLDMARKIEMKHPYHFKYPRLLRSAFAHPS 1322
Query: 1238 FNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
+ + YQRLEF GDA+LD ++LY YP P LT+ ++ +V+N+ V V
Sbjct: 1323 YPYMYENIPNYQRLEFAGDALLDMAFITHLYFKYPDKDPHWLTEHKTPMVSNKFLGAVCV 1382
Query: 1295 DQSFYKFLIFDSNVLSETINNY--------------VDYMITPSSTREVKEGPRCPKVLG 1340
++ ++ ++ L+ I +Y VDY +T + E P+C L
Sbjct: 1383 KLGWHVYIKQNTATLTNQIRDYVLEAEEAEREAGGAVDYWVT------ISEPPKC---LA 1433
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
D++E+ + +I +D+ F+ V L P
Sbjct: 1434 DVIEAYVASIFVDAEFDFGVVQTFFEMHLKPFF 1466
>gi|242763899|ref|XP_002340666.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218723862|gb|EED23279.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1494
Score = 343 bits (881), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 406/1440 (28%), Positives = 608/1440 (42%), Gaps = 257/1440 (17%)
Query: 51 TDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI--------RK 102
T +DP R YQ+EL ++A EN I L TG GKT IA+LL L H+I R
Sbjct: 77 TIEDP----RDYQIELYERAKHENTIAVLATGSGKTLIAILL---LKHIIQNELIDRGRG 129
Query: 103 PQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVM 161
+ I FL +V LV QQ V++ ++ V + G L + W V+V
Sbjct: 130 QRHRISFFLVDSVTLVFQQTAVLKNNLDQPVASIYGDMGLDLWNKDVWTGYFTTNMVIVC 189
Query: 162 IPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGM 220
IL CL H +I ME I LLIFDE HHA K H YA+IMKD Y K + PRIFGM
Sbjct: 190 TADILTQCLLHSYITMEDINLLIFDEAHHA--KKEHAYARIMKDGYLKANPASRPRIFGM 247
Query: 221 TASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND 280
TASP+ A+ + K+ + LE+LL +K+ + + L V P ++Y +
Sbjct: 248 TASPL-----DAKRDPVKAAHELESLLHSKIATASNLNILRQVVGRPEEEQWKYAALKKP 302
Query: 281 TSSS-YVTCSEQLAEIKREQYISALSRKLHDH---------QSLRNTTKQLNRLHDSMKF 330
++ Y T Q +++ + I A S + + + + K L R H +
Sbjct: 303 FKTALYQTLENQYGDMECLKSIFAFSLQASSYLGPWCADRVWADALSEKLLPRFHGKITS 362
Query: 331 CLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGI 390
+ LGV E + + R Q SE+ A R G+
Sbjct: 363 ACKRLGV----------------------ETSAQKAESEISRL-KQMSEMIANYERPSGL 399
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
++L++ S K+ L L+ F + KCIVF + TA+ L + + L
Sbjct: 400 -------DILEQ--LSDKVQVLYRHLARRFEEAPNTKCIVFTKQRNTAKLLEAVFRELS- 449
Query: 450 LASWRCHFLVGVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
+ + R LVG+ +G+ S K+ +E FR GELN + AT V EEGLDI C L
Sbjct: 450 VPNMRPGVLVGIRPGDISGMNSTYHQQFKATIE-FRKGELNCIFATSVAEEGLDIPDCNL 508
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM- 562
V+RFDL +T+ +IQSRGRAR S YA +V+ N + + E+ M R E +
Sbjct: 509 VVRFDLYDTLIQYIQSRGRARSLNSIYAHMVEIDNMEHETRLDEVHQAEEVMRRFCEALP 568
Query: 563 -DR---TSSDAFTC-----SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
DR SD+ S +R YK++S+GA ++ +++L RY S L ++ + P
Sbjct: 569 EDRLLGDKSDSLNAILERDSRKRQYKIESTGATLTYHSAMTVLARYASSLINEAHSSLHP 628
Query: 614 KFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
+ G C +ILP +PI ++G P+ AK+ A + L + G LND+ +
Sbjct: 629 CYVTTQTKGLYECEVILPEASPIRGLIGKPEPRKSLAKQSAAFETCILLRRHGLLNDHFV 688
Query: 674 PQEDN---ATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS--QYPVRLNFY 728
A + + +S S + M+V W K P L
Sbjct: 689 STYQRRLPAMRNAKLSITSKKTSQ---------YSMIVKPAF---WKKGCDHVPCELYLT 736
Query: 729 FMQFIP-DPADRIYREFGLFVKSLLPGEAE---HLKVDLHLA-RGRSVMTKLVPSG---- 779
+ F P +P + R L + LP E +L D+ R S+ L S
Sbjct: 737 VIMFSPAEPLQKERRNLVLLTRERLPQFPEFPIYLDDDVETTIRTISMYKALSLSASELE 796
Query: 780 ---IMQAQQFQEMFLKVILDRSEFNSEFVPL-------GKDDYCESSSSTFYLLLPVIFH 829
+ FQ+++ KV E N E +P G +Y E ++ +
Sbjct: 797 LLTTFTLRIFQDLYNKVY----EMNQEAMPYWLVPTASGIGEYGEDANPS---------- 842
Query: 830 KNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYAT-HKK 888
+DW ++ F +DR S +S D VY T + K
Sbjct: 843 -EVIDWDTLQ-------FVMDNERLDRNS-------------ASPEDFVGRFVYDTWNGK 881
Query: 889 WFYLVT--NIVFEKNGYSPYKDSDSSSHVDHL-----ISSYGIHL-KHPK---------- 930
+ Y +T N F + P S V H I YG+ L K+ +
Sbjct: 882 YRYFLTGVNTSFHPSDPPP-------SFVPHRRYMENIMEYGLSLYKNSRVRFLAECDWN 934
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+ A+ + RNLL K+ D+E + L ++ I + +S P
Sbjct: 935 QPVYDAELIPLRRNLLD--KMSDAEKDVEKRVVVCLETQV----ISAIPAMVATSCLAFP 988
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK---CQERF---------- 1037
+++ R ++ LVA E L G +V E L+A+T + + R
Sbjct: 989 AVITRFDSYLVARECTDTL------GLKVQLEYALEAVTKDSDNTGEHRLEQIHFQRGMG 1042
Query: 1038 -SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+ ERLE LGD FLK A LF+ E + R + N NL A + + +I
Sbjct: 1043 KNYERLEFLGDCFLKMATSISLFVESPNDQEYDFHVNRMTLICNRNLFNTAIQRKIYEHI 1102
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R + F ++ G + R G+A +D H L +KTIA
Sbjct: 1103 RSKGFSRRNWYPDGMKLLR---------------GKANEDQGLT-------HALGEKTIA 1140
Query: 1157 DVVEALVGAFIDDSG----FKAATAFLKWIGIQVEFEASQVTNIC-ISSKSFLPL----- 1206
DV EAL+GA + G F A +K + V + V N SS+ LP
Sbjct: 1141 DVCEALIGASLLSGGPVNRFDMA---VKAVTALVNSDHHNVDNWAEYSSRYSLPPYQIKE 1197
Query: 1207 --SASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLI 1260
D+A +E+ LG+ F + LL AF HPS+ CYQRLEFLGD++LD +
Sbjct: 1198 ADGFEKDLARQVEMKLGYCFQYPKLLRSAFTHPSYPSAWSTVPCYQRLEFLGDSLLDMVC 1257
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-DY 1319
LY +P P LT+ + +V+N+ ++AV S + L + SN L I V D
Sbjct: 1258 VEDLYERFPDRDPQWLTEHKMAMVSNKFLGSLAVRLSLHTHLQYFSNPLQAQIARAVQDS 1317
Query: 1320 MITPSSTREV-----KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
+ S + V + P PK L D+VE+ LGAI +DSGF+ + + P +
Sbjct: 1318 QLAYDSHQTVDFWLHTDDP--PKCLSDMVEAYLGAIFVDSGFDFGVIESFYAKHIKPYFE 1375
>gi|452839019|gb|EME40959.1| hypothetical protein DOTSEDRAFT_56023 [Dothistroma septosporum NZE10]
Length = 1549
Score = 343 bits (880), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 391/1422 (27%), Positives = 596/1422 (41%), Gaps = 235/1422 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL ++A +EN I L TG GKT IAVLL+ EL I FL +
Sbjct: 102 REYQLELFERAKKENTIAVLDTGSGKTLIAVLLLRSVIDDELEKRAAGHAPKISFFLVAS 161
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ V++ ++ KV CG + + W + + +V+V IL CL
Sbjct: 162 VTLVYQQFSVLDCNLDHKVIRLCGADNVDRWTAAHWTQIFHENKVVVCTADILFQCLSRS 221
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-PRIFGMTASPVVGKGASA 232
F+ M+ I LLIFDE HH K NH YA+I+KDFY P+ ++ PRIFGMTASP+ A
Sbjct: 222 FLSMKQINLLIFDEAHH--TKKNHAYARIIKDFYIPEQRELRPRIFGMTASPI-----DA 274
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV---------INDTSS 283
+ ++ ++ + LE+LLD K+ + +D L + P + +Y + + D S
Sbjct: 275 KVDVIQAASELESLLDCKIATTQDMS-LAEAIKRPTEEILRYDALPQRCFETSLLQDLKS 333
Query: 284 SY------VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV 337
Y + ++ AE+ R L R D+ L + + S K+ +E
Sbjct: 334 RYGNIEVFASSFQRAAEVARH-----LGRWCADNFLLHAFSHE-----KSSKYSVEVEKK 383
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
A + DE ++ I+A + I Q S V + R ++S + +
Sbjct: 384 WHARKGRQKVAELDEAVKE--IQAATHYI--------QQRSHVLDELSRTQDLSSKVRQL 433
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW---R 454
+ LRL F + + IVFV+R TAR L + L+ + R
Sbjct: 434 D---------HYLRL-----QFERESTHRAIVFVDRRYTARLLHNLYTRLRGQEGYEYLR 479
Query: 455 CHFLVGVNAGL---KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
HFL+G N G S S L KFR GELN L AT V EEGLD+ C LVIRFD+
Sbjct: 480 GHFLIGSNGGSIDEDSFSFRQQVMTLMKFRKGELNCLFATSVAEEGLDVPDCNLVIRFDM 539
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT 571
T+ ++QSRGRAR S++ ++++GN + +E+ M R D+ D
Sbjct: 540 YNTMIQYVQSRGRARNQHSKFIHMIENGNCAHQQTLGEVRWQENSMRR-FCDQLPEDRKL 598
Query: 572 CSEE-------------RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
E ++ V S+GA ++ G + + + S +P D P +
Sbjct: 599 QGNEDHLEMLLDKEKNIQVRIVPSTGAKLTYGNALDYIANFVSAIPTDCDEPQHPTYEVM 658
Query: 619 DDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN 678
++LP NAP+ ++G + AK+ A A +L KLG + Y LP
Sbjct: 659 ARGQKFQAEVMLPNNAPLRSVMGAVHAKKGLAKRSAAFNACIELLKLGYFDAYFLP---T 715
Query: 679 ATEDEPM----LFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIP 734
T+ P L + D G L P++ + + P +L + F P
Sbjct: 716 YTKKLPAMRNALLAVDMKKQHGYAM------CLKPSIWAEQ--RGSLPGQLYVTVIDF-P 766
Query: 735 DPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIM----QAQQFQEMF 790
DR ++ +S +P V L+ R SV++K + I+ + Q +
Sbjct: 767 KGLDRPHQSMAFLTRSRMP-HFPAFSVYLNDGRKTSVVSKSLSKPIVICDHELAQITKFT 825
Query: 791 LKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTP 850
+V D + Y E S+ Y L P +S D + L++ G P
Sbjct: 826 FRVFED----------VFSKTYEEDSAQLSYWLAPANVQLSSQDED--NQHLAN---GDP 870
Query: 851 GGSVDRKSLPSHGPLQLHNGWS---SESDVENSL---VYATHKKWFYLVTNIVFEKNGYS 904
+D SL W+ ES + N V+ +K++ + K
Sbjct: 871 DAMIDW-SLLDEAFTVGERKWTLEMPESSLSNIFLVDVWDGSRKFY--SKGVDPSKKATD 927
Query: 905 PYKDSDSSSHVDHLISSYGIHL-KHPKQ----PLLRAKPLFRLRNLLHNRKLEDSESHEL 959
P + + S + I Y + L K +Q R +P+ +L RK + EL
Sbjct: 928 PIPEGVAKSKLTGTILDYSVSLWKKARQERDATWSREQPVIEAEKILTQRKNMLAPP-EL 986
Query: 960 EEYFDDLPPELC--QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA 1017
+E D LC L+I ++ + L + P+I++R E+ L++ E +++ G
Sbjct: 987 KEVRQDTKAFLCVQPLRISTIPPEVAAPLFIWPAIIYRFESHLISQEGCNVV------GV 1040
Query: 1018 EVSAEMLLKALTTE-------KCQERFSL--------ERLEILGDAFLKYAVGRHLFLLH 1062
+ E L A T + + +ER + ER E +GD FLK A F+L+
Sbjct: 1041 DCGPEFALAAFTKDSDNSGEHEVEERVNFQRGMGENYERFEFIGDTFLKTATTLSTFILN 1100
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRR--CPRICSKE 1120
+E E RR + N NL + A L YIR PF+ ++ G + K
Sbjct: 1101 PNENEFEFHVRRMLMLCNKNLFQTAMGLKLYEYIRSLPFNRRLWYPEGMKLLAGTGVVKG 1160
Query: 1121 TERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG-AFID----------- 1168
E+ + Q P D H L +KTIADV EAL+G AFI
Sbjct: 1161 EEKVMWHQ-----PRD-----------HPLGEKTIADVCEALIGAAFIAHDCPGDWKPEH 1204
Query: 1169 -DSGFKAATAFLK--------WIGIQVEFE--ASQVTNICISSKSFLPLSASLDMATLEI 1217
+S +A T + W + + A Q+ K D LE
Sbjct: 1205 WESAIRAVTKLVNNDDHKMQTWEDYKAAYAKPAYQMQEATAVQKDL------ADKVELEH 1258
Query: 1218 LLGHQFLHRGLLLQAFVHPS----FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
L ++F + LL AFVHPS + ++ YQRLEFLGDA+LD SYL+ YP P
Sbjct: 1259 L--YRFQYPRLLYSAFVHPSLPFMYEKVPN-YQRLEFLGDALLDMASISYLFYKYPDKDP 1315
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV--------------DY 1319
LT+ + +V+N+ + V+ F+K L L + Y DY
Sbjct: 1316 QWLTEHKMAMVSNKFLGALCVNIGFHKHLRHHHAKLEHQVREYAIELLEAKRVAGDSRDY 1375
Query: 1320 MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
T S PK L D++ES +GA+ +DS FN V
Sbjct: 1376 WTTVSDP---------PKCLPDIIESYVGALFIDSDFNYAEV 1408
>gi|336367926|gb|EGN96270.1| hypothetical protein SERLA73DRAFT_112480 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1460
Score = 341 bits (875), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 389/1442 (26%), Positives = 622/1442 (43%), Gaps = 252/1442 (17%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R+YQ E+ ++A N+I L TG GKT I++LLI + L K ++ + +FL P VAL
Sbjct: 16 LPRRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIKWIV-LQEKAKRKVIVFLVPKVAL 74
Query: 118 VQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V+QQA I +V+ F G L +W+K +Q +V+VM QI L L H
Sbjct: 75 VKQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDVVVMTAQIFLNILTHSHWS 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG-KGASAQAN 235
+E ++LLIFDECHH + NH Y IM ++++ P++FGMTASP+ K A
Sbjct: 135 VEKVSLLIFDECHH--TRKNHAYNGIMHEYFQTIPSDRPKVFGMTASPIWNPKDAEG--- 189
Query: 236 LPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
S+ +LE LDA V +V E E+L+ PV + ++ P + Y T + L+
Sbjct: 190 ---SLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDTYDYLYPTLWDCLSL 246
Query: 295 IKREQYISALSRKLH-DHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
I+ KLH +Q RN+ GA A L + +T
Sbjct: 247 FTNAVEINIPVDKLHMKYQMTRNS--------------------LGAFSADLFLYTDIKT 286
Query: 354 ----MRNELIEAEGNT------------IDDSLCRFASQASEVFAAICRRDGIASDL--- 394
+EL ++ T +D+S SQ + + + D I S+
Sbjct: 287 RLIHFIDELESSQNETFLGLDGFDHHIDVDESSESAQSQFPAISPDLEQIDAILSEFRPF 346
Query: 395 --SCIEVLKEP------FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
S EV P + + K+ L+ +L IVFV + A L+ IL
Sbjct: 347 FDSGTEVPAVPIPVPLAWCTPKVNALVEVLLE-HYSPTFHAIVFVEQRQVAACLAKILPC 405
Query: 447 LKFLASW-RCHFLVG----------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
+ L + RC LVG VN+ + M + +E FR G+LNLLVAT V E
Sbjct: 406 IPELRGYVRCAELVGHGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLVATSVAE 465
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EGL C +V+RFD + + ++QSRGRAR S + + + L F K E
Sbjct: 466 EGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNAFLKSEP 525
Query: 556 RMNREIMDRTSSDAF--------------------TCSEERIYKVDSSGACISAGYGVSL 595
+ R R A ER Y V S+GA ++ V+L
Sbjct: 526 ELKRVYQTREEPAATRLDPGEDSEEGEVEEDDPADVAVRER-YIVPSTGAVLTYDSAVNL 584
Query: 596 LHRYCSKLPHDEFFNPK-PKFYYFDDLGGTICHIILPANAPIHQ----IVGTPQSSMEAA 650
L+ CS +PHD + P+ PK+ G + LP++ P+ G + S A
Sbjct: 585 LNHLCSLIPHDAYTPPQLPKYS-----GDYAVMLELPSSLPLPIDRLFFSGPERRSKREA 639
Query: 651 KKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVP- 709
K+ A+++LH+L +DYLLP SS E RG L VP
Sbjct: 640 KRAVAFLAVKELHRLDVFDDYLLPAT-----------SSKGRGTEDADGRGILDFSDVPD 688
Query: 710 ---AVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
++R WT + Y D D GL + LP K D
Sbjct: 689 LMDVLVRDPWT-----LGAKLYLHIVTIDDQD----VGGLVTGTCLP--PVEFKSD---- 733
Query: 767 RGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLG-----KDDYCESSSSTFY 821
G ++ + ++ + +E D+ SEF+ +G E S+F
Sbjct: 734 -GSTIQLRY--DRVLLFDEDEEW------DQRRMLSEFMRMGLWFCVTGRPAELPFSSF- 783
Query: 822 LLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS--SESDVEN 879
L+P++ +K+ +D++++ R S P GS D WS SE D +
Sbjct: 784 -LVPLLPNKH-IDFEVVERVASEPY-----GSYD---------------WSGASEKDYNH 821
Query: 880 SLVYATHKKWFYLV-TNIVFEKNGYSPY----KDSDSSSHVDHLISSYGIHLKHPKQP-- 932
+V +++ LV NI ++ S K+S+ ++ D+ + + + P
Sbjct: 822 LMVMNSNQYGRALVLRNIRYDLTPLSTTPPGSKESEYPTYRDYFVQRWTRKKREAFVPEN 881
Query: 933 --LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKI--------------I 976
L+ A L R S + + E+ DL +LC+ +I +
Sbjct: 882 SFLIEATYLPRC----------PSSVYRVREHLIDL--DLCKRQIARAGLLVPKDACRRV 929
Query: 977 GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQER 1036
FS+D+ + LLP + R+ ++ A + + + P AE ++L++A T
Sbjct: 930 HFSEDVYRAFLLLPKLCRRVTDVYRARQER--IELGLPMIAE---DLLIEASTLPTTSLT 984
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
F+ +RLE LGD+ LK H+ + EG+L+ R N+V+N LL A L+ ++
Sbjct: 985 FNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSHLRQNSVSNRTLLSRAKEIELERFL 1044
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
+ + F+ ++T+ T+ +R S + ++++
Sbjct: 1045 NSESHN-LHFWRY------TVPEDTDSTL-------------CRIRRSTRREF-PRRSLQ 1083
Query: 1157 DVVEALVG-AFID---DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
D +EA +G AF+ D +A TA G + + S L
Sbjct: 1084 DCMEATLGAAFVTGGIDMALQAGTALGLSFGGPIPWSLKYSRRPESSPAPHL-------F 1136
Query: 1213 ATLEILLGHQFLHRG-LLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
A L+ L ++F HRG LL++A HPSF YQRLEFLGDAV+D ++ +YLY +P+
Sbjct: 1137 ADLQESLCYEF-HRGDLLVEAATHPSFATSASSSYQRLEFLGDAVIDLVVLNYLYRRFPQ 1195
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREV 1329
GQL+ RS V A+++V + +K L+ ++ LS IN +V + + S +
Sbjct: 1196 ANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVEDII 1255
Query: 1330 KEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRE 1385
+G + PK L D++ES +GAI +DS +N V ++ + +L+ NL +P+ E
Sbjct: 1256 NKGWKYDPPKALSDVLESVVGAIFVDSAYNFEKVASVVELIMSDVLELLSPNLPKDPVSE 1315
Query: 1386 LL 1387
L+
Sbjct: 1316 LM 1317
>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1533
Score = 340 bits (872), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 402/1486 (27%), Positives = 626/1486 (42%), Gaps = 214/1486 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL ++A +EN+I L TG GKT IAVLL L H+I K + + P +
Sbjct: 110 REYQLELFERAKQENVIAVLDTGSGKTLIAVLL---LKHVIEKELEDRALGKTPRI---- 162
Query: 120 QQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
S KV FCG + L S W K Q V+V ++L CL H FI ME
Sbjct: 163 --------SFFLKVERFCGAMQCDLWSKQTWAKHFIQNMVIVCTAEVLAQCLMHSFINME 214
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVVGKGASAQANLP 237
I LL+FDE HHA K H YAKI+ D+Y P + K P++FGMTASPV A+ ++
Sbjct: 215 QINLLVFDEAHHA--KKGHSYAKIISDYYIPTEDSKRPKVFGMTASPV-----DAKVDVV 267
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKR 297
++ + LE L ++ + + + L +S P V +Y P+ +
Sbjct: 268 QAASDLEKFLQCRIATTANPDLLRKTISRPHEEVVEYAPL-------------------Q 308
Query: 298 EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNE 357
+ + L +++ D R+ + + L S K LG + + L +E E
Sbjct: 309 TPFETTLYKEMRD--KFRD-VRAFHALFQSSKEATSELGPWCSDMYWFFALQEEEAKNLE 365
Query: 358 LIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP-----FFSKKLLRL 412
E + D +S E+ A R AS + EP + S K+L L
Sbjct: 366 SREEQAFHRDKKRKPISSLDEEM--AKLRE---ASKIVQNHPFGEPRPTLTYLSSKVLEL 420
Query: 413 -IGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVN---AGLK 466
+L F Q + +CIVFV R TAR L + ++ +L S ++G + +GL
Sbjct: 421 HTWLLRYFERQTNSRCIVFVQRRHTARILHQVFASIGGPYLKS---GMIIGNSSRASGLN 477
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
R + ++L +F+ GELN L AT V EEGLDI C +VIRFDL +T+ ++QSRGRAR
Sbjct: 478 ISFREQVMTLL-RFKKGELNCLFATSVAEEGLDIPNCNIVIRFDLYKTMIQYVQSRGRAR 536
Query: 527 MPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS-----------DAFTCSEE 575
S Y +V+ GN + +++ +R+ RE + D T E
Sbjct: 537 HKNSRYLHMVEEGNISHRQTVLE-ARQAERLMREFCESLPENRLLKGHGADLDDLTFERE 595
Query: 576 --RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPAN 633
R Y S+ A ++ + +L + + LP + P + + G +C +ILP N
Sbjct: 596 FFRTYTEPSTRAKLTYDNSLVILAHFTAALPCKGDVSSDPLYIMSSERGEFLCEVILPEN 655
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
+P+ G P SS AK+ A + L + L++ LLP T+ P + ++
Sbjct: 656 SPVPSARGRPASSKAVAKRSAAFELCIRLREKDYLDENLLPI---FTKQLPAMRNA---R 709
Query: 694 YEGEGSRGELHEMLVPAVLRQSW--TKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSL 751
+ +++M+ L W T+ P L +F PD + + + ++
Sbjct: 710 LALNCQKTNMYDMMTKPNL---WAETRGTVPETLYITVTEF-PDGLEMPNQPLAILTRTA 765
Query: 752 LPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDD 811
LP E L + L G+ +L+P G+ +F +V L S F +
Sbjct: 766 LPKLPEFL---IFLNSGKPSRVQLMPLGV----KFDCTSHEVQLLTSYTLRAFKDVFNKT 818
Query: 812 YCESSSSTFYLLLPVIFHKNSVDWKI--IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
Y E S Y L P+ +D +R L P +V+ + P L N
Sbjct: 819 YEEDISKVSYWLAPMKVFYKVLDTGCYGLRDLLDWPALEEASNTVEYRWTPLTPDGFLLN 878
Query: 870 GWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHL--ISSYGIHL- 926
+ + + +++F N + P D+ ++ + I +Y I L
Sbjct: 879 KYLVDK-------WDGGRRFFTECINPNLKPTDPVP-DDAVTAKKPEQRKDILNYSISLY 930
Query: 927 --KHPKQPL--LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD---LPPELCQLKIIGFS 979
KQ L R +P+ R + H R + +E E F L PE LKI
Sbjct: 931 KGSREKQDLNWNRGQPVVEARQVQHRRNML-AEPERQEGDFRSKVYLCPE--PLKISALR 987
Query: 980 KDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT-----TEKCQ 1034
+S+ +LP+++HR E L+A+E LL G +++ ++ L+A+T TEK
Sbjct: 988 PAAVASIYVLPAVIHRTEQYLIALEACQLL------GLDIAPDLALEAVTKDSDNTEKHN 1041
Query: 1035 ERF---------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
E + ERLE +GD FLK LF + +E + +R + N NL
Sbjct: 1042 EEAQNFRRGMGNNYERLEFMGDCFLKMGTSIALFSQNPDDNEFDFHVKRMCLICNQNLFD 1101
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A R L Y+R F ++ G + +G+ EV
Sbjct: 1102 TAKRIELTKYVRSMAFSRRTWYPEGLK---------------MLEGKGHKKTGDEVM--- 1143
Query: 1146 GHHWLHKKTIADVVEALVGA----------FIDDSGFKAATAFLKWIGIQVEFEASQVTN 1195
H L KT+ADV EAL+GA ++ ++ A A + + AS
Sbjct: 1144 -KHSLSDKTVADVCEALIGAAYLTHNTPGKWLPENWDNAVRAVAALVSSENHAMASWSEY 1202
Query: 1196 ICISSK-SFLPLSASLDMATL----EILLGHQFLHRGLLLQAFVHPS--FN-RLGGCYQR 1247
K S+L A+ L E ++F LL AF+HPS FN YQR
Sbjct: 1203 FSAYKKPSYLDAEATAAQIDLVKQAEKEHPYRFRSAKLLRSAFMHPSYPFNYEKVPSYQR 1262
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGD+++D ++L +P P LT+ + +V+N+ V V F+K L + +
Sbjct: 1263 LEFLGDSLIDTACITWLIYKFPDKDPQWLTEHKMAMVSNKFLGAVCVKLGFHKHLKYSYS 1322
Query: 1308 VLSETINNYV--------------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLD 1353
+ I +YV DY T VK P+C L D+VE+ +GA+ +D
Sbjct: 1323 QMEYQIRDYVTELREAERESKGARDYWTT------VKSPPKC---LPDIVEAYVGALFVD 1373
Query: 1354 SGFNLNTV-----WKIMLSFLDPILKFSNLQLNPIRELLEL------CNSYDLDLQ-FPS 1401
S +N V I F D + S +P+ L CN + + Q P+
Sbjct: 1374 SEYNFAKVEMFFDMHIKWYFEDITIYDSYANSHPVTRLHSFLYEEFGCNEHKIFAQELPT 1433
Query: 1402 LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKL 1447
+ GG A V ++ + + S K +A+Q L S L
Sbjct: 1434 ITPGGPEKCIAGVMVHNRMISEGYASAGKSAKVKAALAAQNLLSGL 1479
>gi|255953957|ref|XP_002567731.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589442|emb|CAP95586.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1495
Score = 338 bits (866), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 389/1428 (27%), Positives = 609/1428 (42%), Gaps = 264/1428 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI-------RKPQKSICIFLA 112
R+YQ+EL ++A N I L TG GKT +AVLL+ + + RKP+ + FL
Sbjct: 80 REYQIELFERARASNTIAVLDTGSGKTLVAVLLLKHILQIELNKRANGRKPR--VAFFLV 137
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
+V LV QQ+ V+ ++ V F G L W+K +++Y V+V +IL + L
Sbjct: 138 DSVTLVFQQSAVLRNNLDQSVGHFYGNLGPDLWDQQTWDKHLEKYMVIVCTAEILNHSLL 197
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGA 230
+ I ++ I LLIFDE HHA K HPYA+I++D Y K D K PRIFGMTASPV K
Sbjct: 198 NGHIGIDQINLLIFDEAHHA--KKEHPYARIIRDSYLKADPGKRPRIFGMTASPVDAKCD 255
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
A+A + LE LL+ ++ + D L +FV+ P+ + Y +
Sbjct: 256 IAEAAM-----QLETLLNCRIATTSDLALLRNFVNKPIEEEWVYDKL------------- 297
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS--YILL 348
L + H H +L+ + L + +F G+ A + L
Sbjct: 298 ------------PLPLETHLHSTLKTKYGDMPILEGAFRFASVASSELGSWCADQVWALA 345
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
DE + +E +S + + +ASE I + + + + S K
Sbjct: 346 LSDEVLPK--LEGSVGKASESDPQDSEKASEEIKRIQEANQLVKEYIANQTFTPSDLSSK 403
Query: 409 LLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG--- 464
+ L+ L F KCIVF R TA+ L + + L+F + R LVGV G
Sbjct: 404 VELLMRKLQEQFAKSPDTKCIVFTQRRNTAKVLLQLCEKLQF-PNLRPDVLVGVRKGDAL 462
Query: 465 -LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
+ S R +L KFR E+N L AT V EEGLDI C LV+RFDL +TV ++QSRG
Sbjct: 463 GMNSTFRRQFL-VLVKFRKSEINCLFATSVAEEGLDIPDCNLVVRFDLYDTVIQYVQSRG 521
Query: 524 RARMPQSEYAFLVDSGN----------QRELDLIKNFSK---EEDRMNREIMDRTSSDAF 570
RAR S YA +V+ GN +R L+KNF E+ ++ R+ D
Sbjct: 522 RARRADSVYATMVECGNRNHSTRLQEVRRAEHLMKNFCNLLPEDRKLYRDDHD-MGVLIH 580
Query: 571 TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI----- 625
+R Y + S+GA ++ + + +L R+ S L PK + Y +++ ++
Sbjct: 581 QEDRKRTYTIPSTGAMLTYRHAIGVLARFASSL----LTVPKSQ-QYENEISASVTYIVM 635
Query: 626 -------CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL------ 672
C II+P +P+ +++G + AK+ A A L K L+++
Sbjct: 636 SENESFSCEIIMPEKSPVRRVLGCSEPKKSLAKQSAAFDACLLLRKRNLLDEHFNSVYHK 695
Query: 673 -LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--YPVRLNFYF 729
LP NA + + S +D Y P++ W + Q P RL
Sbjct: 696 RLPAMRNA---KLAITSKKTDQYRMRTK---------PSI----WARQQGTIPTRLYAIV 739
Query: 730 MQFIP-DPADRIY-------RE-------FGLFVKSLLPGEAEHLKVDLHLARGRSVMTK 774
++ IP +P R + RE F +F+ + + L +D L +
Sbjct: 740 IRLIPSEPLTRAHGSIVLLTRERIAAIPTFPVFLDDDIETTVQSLCIDGCLEVASEELET 799
Query: 775 LVPSGIMQAQQFQEMFLKVILDRSE-FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSV 833
L + F ++F K +E F P D +S+S+F + +
Sbjct: 800 LTAFTLA---VFHDVFHKTYKHVTEQFPYWLAPARGDVDIRTSTSSF----------DMI 846
Query: 834 DWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWF--Y 891
DW ++ +P WS++ + E L + W Y
Sbjct: 847 DWDALQYVQDNPKL----------------------MWSTDMEPELLLTKFIYDDWNGKY 884
Query: 892 LVTNIVFEKN--GYSPYKDSDSSSHVDHLISSYGIHL---KHPK--------QPLLRAKP 938
+ + N P S + I ++ + L PK QP+L+A+
Sbjct: 885 RYFPLAIDPNLRPSDPPPSYAPSRKWSNDIMNWSLSLSKNSRPKFFDRCIWTQPVLQAEL 944
Query: 939 LFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLEN 998
+ RN L ++ E+ + P L I + ++ + P+I+ R+E+
Sbjct: 945 ICLRRNFL-DKAAEEERASNTRCVICPQP-----LAISAIPMSVAATCLVFPAIISRMES 998
Query: 999 LLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFSL------------ERLEI 1044
L+A E +L + ++ E L+A T ++ +E SL ERLE+
Sbjct: 999 YLIAQEGCKML-----DLGDIKLEYALEAFTKDSDNTEEHRSLQIHVQRGMGKNYERLEL 1053
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+ LK A LF + DE + R + N NL K A L YIR + F
Sbjct: 1054 LGDSVLKMATSISLFAQNPDDDEYDYHVNRMCLICNKNLFKNAIELKLYEYIRSRGFSRH 1113
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
++ G + +Y GR +A+ S+G H L +KTIADV EAL+G
Sbjct: 1114 MWYPPG--------------LSLEY-GRD----HAKFIDSEGKHSLAEKTIADVCEALIG 1154
Query: 1165 AFI----DDSGFKAATAFLKWIGIQVEFEASQVTNI--CISSKSFLPLSASLDMATLEIL 1218
A + DD+ + A +K + I V + T+ IS+ S +PL + E
Sbjct: 1155 ASLLSGGDDNRYDMA---IKAVTIFVNSQNHTATSWKDYISAYS-IPLYQNRAPDGFEKN 1210
Query: 1219 L--------GHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSV 1267
L G+ F + LL AF HPS+ CYQRLEFLGDA+LD + +L+
Sbjct: 1211 LARQIFEKVGYDFKYPRLLRSAFTHPSYPLAWAKVPCYQRLEFLGDALLDMVCVEHLFHR 1270
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVD-------QSFYKFLIFDSNVLSETI------- 1313
+P P LT+ + +V+N+ +AV Q F L+ ++ +E I
Sbjct: 1271 FPNRDPQWLTEHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNSKYAEEIQLAESES 1330
Query: 1314 NNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
N VDY ++ S + PK L D++E+ LGAI +DSGF+ +
Sbjct: 1331 NGEVDYWLSTSDS---------PKCLPDMLEAYLGAIFVDSGFDFTVI 1369
>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
CIRAD86]
Length = 1516
Score = 337 bits (864), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 367/1448 (25%), Positives = 618/1448 (42%), Gaps = 246/1448 (16%)
Query: 39 GFGAESSV----GAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI- 93
G E SV Q+ D + R+YQ+EL ++A +EN I L TG GKT IAVLL+
Sbjct: 46 GLDEEQSVHSLLAQQQRDTQIVKNPREYQIELFERAKQENTIAVLDTGSGKTLIAVLLLR 105
Query: 94 ----YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCD 148
+E+ + + Q I FL +V LV QQ V+E ++ KV CG +
Sbjct: 106 WIIDHEIENRAKGSQAKISFFLVASVTLVYQQFAVLETNLDHKVARLCGADNTDRWDKTR 165
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY- 207
W KE + + +V +IL L ++ M+ I LLIFDE HH K NH YA+I+KDFY
Sbjct: 166 WMKECYENKAIVCTAEILFQALSFGYLTMKQINLLIFDEAHH--TKKNHSYARIIKDFYL 223
Query: 208 KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
+ ++ PRIFGMTASP+ A+ ++ ++ + LE LLD+K+ + D L S + P
Sbjct: 224 EEEVHDRPRIFGMTASPI-----DAKMDVIQAAHELEALLDSKIATTSDMS-LSSAIKKP 277
Query: 268 VVRVYQY---------GPVINDTSSSYVTCSE------QLAEIKREQYISALSRKLHDHQ 312
++ +Y P++ + Y ++ + AE+ R ++ + +
Sbjct: 278 KEQIMRYPSLPQAGFETPLLQAVRARYSDMTQFTKIFTRAAEVAR--HLGSWCADFYLLD 335
Query: 313 SLRNTTKQLNRLHDSMKFCLENLGV-CGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
L + + +L KF N G AL D ++ D+
Sbjct: 336 CLSDEKSKRYKLAAEQKFHARNAGREVAAL---------DRALKR----------IDAAV 376
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFV 431
FA + + RD I+S + +L R + F +CIVFV
Sbjct: 377 AFAQEHRNILDTEITRDRISSKVY------------ELYRYLA--EQFERPSSNRCIVFV 422
Query: 432 NRIVTARALSYILQNLKFLASWRCHFLVGV-NAGL--KSMSRNAMKSILEKFRSGELNLL 488
++ TAR L+ + Q +K + FL+G N G + S +L KFR G+LN L
Sbjct: 423 DKRYTARLLNSLFQRIK-SPHMKSTFLIGSGNTGQDEDNFSFRQQVMVLLKFRKGDLNCL 481
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
AT V EEGLD+ C L+IRFD+ T+ ++QSRGRAR S++ +V++GN + +
Sbjct: 482 FATSVAEEGLDVPDCNLIIRFDMYATMIQYVQSRGRARNQNSKFIHMVENGNSIHKETVN 541
Query: 549 NFSKEE-------DRMNREIMDRTSSDAFTCSEER----IYKVDS-SGACISAGYGVSLL 596
E D++ + + +SD+ ER +VD S A ++ G +++L
Sbjct: 542 EVRYAELSMRAYCDQLPEDRKLQGNSDSIEALMERERNMEVRVDPVSKAKLTYGNALNIL 601
Query: 597 HRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACL 656
+ S +P D P + +C ++LP N+P+ ++G AK+ A
Sbjct: 602 ATFVSAIPTDGHEMQHPTYVVSSRGQKFVCEVVLPGNSPLRSMIGKVHQKKTLAKRSAAF 661
Query: 657 KAIEDLHKLGALNDYLLP-QEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQS 715
+A+ +L K +N+ L+P + L + D R + P + +
Sbjct: 662 EAVIELRKKSWINENLMPVYQRKLPAMRNALLAVDMKKTNQYAMR------IKPKIWAEQ 715
Query: 716 WTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKL 775
+ PV+L + F P+ DR+++ ++ +P + + L+ R +V +
Sbjct: 716 --RGTLPVQLWITVIDF-PEKLDRVHQPIAFLTRTQMP-QFPSFPIYLNDGRATTVKSAD 771
Query: 776 VPSGIMQAQQ------------FQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLL 823
+ + ++ Q+ F+++F K + + S ++ +S+ + +
Sbjct: 772 LGAPLLVDQERLKKLTAFTFRVFRDVFSKTYEEDAAKLSYWLAPATLLLSTDQASSAHNI 831
Query: 824 LPVIFHKNSVDWKIIRRCLSSPVFG-TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLV 882
P+ ++DW+++ L + + TP DR V+ +V
Sbjct: 832 DPM----TAIDWRLLEDVLDNDEYKWTPSTPHDRF-------------------VDKFIV 868
Query: 883 --YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHP---------KQ 931
+ +K++ + + ++ P S + I +Y + L Q
Sbjct: 869 DMFDGSRKFYSIGVDSSLHQDDPIPEHASKGKGNRGGSIMNYSVSLWKKSRQARVWSQNQ 928
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
P++ A + + RN+L E E + + + + PE L+I + ++ +S + P+
Sbjct: 929 PVVEADIVLQRRNML--APPEQKELAPVTKAY--IVPE--PLRISAITPNVAASCFVWPA 982
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE-------KCQERFSL----- 1039
I HR E+ L++IE + G E L A T + + +ER +
Sbjct: 983 IAHRFESCLISIEGCEAV------GVTCGPEFALAAFTKDSDNQGEHEAEERVNFQRGMG 1036
Query: 1040 ---ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE +GD FLK A F+++ +E E RR + N NL + A + L YI
Sbjct: 1037 ENYERLEFIGDTFLKTATTISTFIMNPNENEFEFHVRRMLMLCNKNLYQTALQLKLYEYI 1096
Query: 1097 RDQPFDPCQFFALGRR--CPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
R F+ ++ G + K E+ ++ + P ++ L +KT
Sbjct: 1097 RSLAFNRRYWYPEGLKLLVGTGVVKGQEKEMYHE-----PREVG-----------LGEKT 1140
Query: 1155 IADVVEALVGAFI---DDSG-----------FKAATAFLK--------WIG-IQVEFEAS 1191
IADV EAL+GA D G +A T +K W I + +
Sbjct: 1141 IADVCEALIGAAYLSHDKPGEAWEPEHWRDAVRAVTKLVKSDDHKMQTWQDYIDAYDKPA 1200
Query: 1192 QVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRL 1248
T + + L L + A + F + LL AF+HPS + YQRL
Sbjct: 1201 YQTGESTAVQKDLALRVEKEHA-------YTFTYPRLLYSAFMHPSVPYMYEKVPSYQRL 1253
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV 1308
EFLGDA+LD +YL+ YP P LT+ + +V+N+ + VD F+K L
Sbjct: 1254 EFLGDALLDMASITYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCVDIGFHKHLRHHHAT 1313
Query: 1309 LSETINNY---------------VDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLD 1353
L + +Y VDY T V + P+C L D+VE+ +GA+ +D
Sbjct: 1314 LEHQVRDYATELLEAKRIAGKGCVDYWTT------VSDPPKC---LPDIVEAYIGAMFID 1364
Query: 1354 SGFNLNTV 1361
S F+ N V
Sbjct: 1365 SNFDYNQV 1372
>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1534
Score = 337 bits (863), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 390/1436 (27%), Positives = 612/1436 (42%), Gaps = 259/1436 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL ++A +N I L TG GKT IAVLL L H+++ KP + + F
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLL---LRHVLQNELNDRANGKPHR-VSFF 179
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V L QQA V+ +I V F G L WE+ + Q V+V +IL C
Sbjct: 180 LVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQC 239
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGK 228
L + ++M I LLIFDE HH K +HPYA+I++D ++K + PRIFGMTASP+ K
Sbjct: 240 LLNSHVRMNQINLLIFDEAHH--TKKDHPYARIIRDSYFKASPPQRPRIFGMTASPIDTK 297
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G ++ + LE LLD+++ + L VS P+ +V+ Y + S +
Sbjct: 298 G-----DIIAAATRLETLLDSRIATTSKITLLRQVVSRPIEKVWAY----DRLESPF--- 345
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL---ENLGVCGALHASY 345
K + H+ + N + L +F LG + A
Sbjct: 346 ------------------KTNLHKLMENRFGNVKALEGVFRFAWYASSELGRWCSDRAWL 387
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ D + +E N + +S A++ F I AS++ +P F
Sbjct: 388 YALADDVLPK---LEGHVNKLAESTAA-ATERDMAFKEITLIKE-ASNIVKAHTFNDPEF 442
Query: 406 SKKLLRLIGILSTFRLQQHM------KCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
+L + +L T L +H KCI+F + TA+ L + L + R L+
Sbjct: 443 PGELSPKVRLLQT-ELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILS-IPHLRPGVLI 500
Query: 460 GVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
GV +G + M+ + L KFR GE+N L AT V EEGLDI C LV+RFDL T+
Sbjct: 501 GVRSGDIGGMNITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLI 560
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT------S 566
++QSRGRAR S YA +V+ N ++ + E M E + DR
Sbjct: 561 QYVQSRGRARHYHSTYASMVEKDNSDHEARLREVREAEKTMQNFCETLPEDRILHGNDHD 620
Query: 567 SDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
D+ EE R + V S+GA ++ +++L RY S L +++ P+ Y +G T
Sbjct: 621 LDSLLQHEEGRRTFTVKSTGARLTYHSAIAILARYASSLQYEKETTPQAT-YVVQSVGNT 679
Query: 625 -ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQE 676
+C +ILP +PI + G+P AK+ A L + L+D+ LP
Sbjct: 680 YVCEVILPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLLRRHKLLDDFFKSIYHKRLPAM 739
Query: 677 DNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIP-D 735
NA + + S ++ Y+ +L P++ R+ + P +L + +P +
Sbjct: 740 RNA---KLAITSKKTNQYDM---------LLKPSIWRRH--QGILPSKLYGTILSLLPSE 785
Query: 736 PADRIYREFGLFVKSLLPG-EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVI 794
P R ++ + + LP A + +D + TK+VP + + L+ +
Sbjct: 786 PLSREHQPILVLTREKLPDFPAFPIYLD------EDIETKVVPRSLDTGMELSAEELRAL 839
Query: 795 LDRSEFNSE-FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGT---- 849
+ F F + Y + S Y L P + P+
Sbjct: 840 ---TTFTLRIFRDVFHKVYEQESEKLPYWLAP-----------------AEPLDANGREP 879
Query: 850 -PGGSVDRKSLP---SHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
P G +D K++ + + + ES V N ++ KW F+ + + +
Sbjct: 880 GPRGIIDWKTVTFVQENDEIVFSRDLAPESLV-NRFMF---DKWDGRSRFFTIKVMEGLR 935
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLK-----------HPKQPLLRAKPLFRLRNLLHNR 949
P H+D+++S Y + L H QP+L+A+ + RNLL
Sbjct: 936 AADPPPSSVPRRRHMDNIMS-YCLSLSKNSRARFLAGCHWDQPVLQAELVRLRRNLLD-- 992
Query: 950 KLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
KL E E F P LKI I S+ P+I+ RL++ L++IE L
Sbjct: 993 KLTTEEKKIQTECFICAEP----LKISAIPPSIASTCLAFPAIITRLDSYLISIEACDEL 1048
Query: 1010 SASFPEGAEVSAEMLLKALT--TEKCQERF------------SLERLEILGDAFLKYAVG 1055
+ ++ L+A+T ++ +E + ERLE LGD FLK A
Sbjct: 1049 DLV------IRSDYALEAVTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATS 1102
Query: 1056 RHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR 1115
LF + DE + R + N NL A + + YIR + F ++ G
Sbjct: 1103 IALFTQNPDDDEFDYHVNRMCLICNKNLFNTAKKRQIYRYIRSRSFSRHVWYPDGLTL-- 1160
Query: 1116 ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI-------- 1167
+ K+ + + SQ H L +KTIADV EAL+GA +
Sbjct: 1161 LQGKDHSKKMLSQ-----------------AKHALGEKTIADVCEALIGACLLSGGPEHR 1203
Query: 1168 DDSGFKAATAFL--------KW---IGI------QVEFEASQVTNICISSKSFLPLSASL 1210
D G KA + F+ +W IG+ QV TN+ +
Sbjct: 1204 FDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAETNLALQ----------- 1252
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPS-----FNRLGGCYQRLEFLGDAVLDYLITSYLY 1265
+E LG+ F + LL A HPS + R+ CYQRLEFLGD++LD + L+
Sbjct: 1253 ----VEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRV-PCYQRLEFLGDSLLDMVCVEDLF 1307
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
+P P LT+ + +V+N+ +AV F+K + SN L I YV+ + T +
Sbjct: 1308 HRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEIETAEA 1367
Query: 1326 TRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
E V + P PK L D+VE+ LGAI +DS F+ + + + P +
Sbjct: 1368 ESEGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQ 1421
>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1497
Score = 336 bits (862), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 399/1426 (27%), Positives = 602/1426 (42%), Gaps = 246/1426 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--------QKSICIFL 111
R YQ+EL ++A EEN I L TG GKT IA+LL L H+IR + I FL
Sbjct: 84 RDYQIELYERAKEENTIAVLATGSGKTLIAILL---LKHIIRNELIDRERGQRHRISFFL 140
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
+V LV QQ V++ ++ V + G L + W + V+V I++ CL
Sbjct: 141 VDSVTLVFQQTAVLKNNLDQAVASLFGDMGLDLWNEDVWMDYFTKNMVIVCTADIVVQCL 200
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVG 227
+I ME I LLIFDE HHA K H YA+IM++ Y KP+ PRIFGMTASP+
Sbjct: 201 LQSYITMEDINLLIFDEAHHA--KKEHAYARIMREGYLKAKPECR--PRIFGMTASPL-- 254
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND--TSSSY 285
A+ + K+ LE+LL +K+ + + L V P ++Y P + ++ Y
Sbjct: 255 ---DAKRDPVKAAQELESLLHSKIATASNLTLLRQVVGRPEEEQWRY-PALKKPFKTALY 310
Query: 286 VTCSEQLAEIKREQYI--------SALSRKLHDH-QSLRNTTKQLNRLHDSMKFCLENLG 336
+Q +++ + I S L DH S + K L R H
Sbjct: 311 QILEKQYGDMECLKSIFTFSFEASSYLGPWCADHVWSGAISEKMLPRFH----------- 359
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
G + ++ L G+ M+ E + R Q SE+ G+ S +
Sbjct: 360 --GKITTAWKRLGGETAMKKTETE---------ISRL-RQMSELITNY----GMPSGPAI 403
Query: 397 IEVLKEPFFSKKLLRLIGILSTFRLQQ--HMKCIVFVNRIVTARALSYILQNLKFLASWR 454
+E L E +R++ T R ++ + KCIVF + TA+ L + + L + R
Sbjct: 404 LEQLSEK------VRVLYQHLTKRFEEAPNTKCIVFTKQRNTAKLLEVVFKQLS-VPHMR 456
Query: 455 CHFLVGVNAG----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
LVG+ +G + S K+ +E FR GELN L AT V EEGLDI C LV+RFD
Sbjct: 457 PGVLVGIGSGDICGMNSTYPQQFKATIE-FRKGELNCLFATSVAEEGLDIPDCNLVVRFD 515
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DR-- 564
L ET+ ++QSRGRAR +S YA +++ N + + E+ M R E + DR
Sbjct: 516 LYETLIQYVQSRGRARRSESIYAHMIEIDNMEHETKLDEVHQTEELMRRFCEALPEDRLL 575
Query: 565 -TSSDAFTC-----SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
++DA + S +R YK++S+GA ++ + +L RY S L ++ Y
Sbjct: 576 GNNNDALSAILEKDSRKRQYKIESTGATLTYHSAIMVLARYASSLQYENNETGSHPHYVT 635
Query: 619 DDLGGTI-CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL----- 672
+ G C +ILP +PI ++G P+ AK+ A + L G L++
Sbjct: 636 TQIKGMYECEVILPKGSPIRGLMGKPEPRKSLAKQSAAFETCILLRNNGLLDNNFVSTYQ 695
Query: 673 --LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS--QYPVRLNFY 728
LP NA + + S + Y M+V WT++ P +L
Sbjct: 696 RRLPAMRNA---KLSITSKKTTQYS----------MIVKPSF---WTQACDGVPCQLYLT 739
Query: 729 FMQFIP-DPADRIYREFGLFVKSLLPGEAE---HLKVDLHLA-RGRSVMTKLVPS----- 778
+ F P +P R L + LP E +L+ D+ R SV L S
Sbjct: 740 LIMFSPAEPLQNERRSMVLLTRKRLPQCPEFPIYLEEDVETTVRTISVSKALSISPDDLE 799
Query: 779 --GIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV---------- 826
+ FQ+++ K+ E N E +P Y L+P
Sbjct: 800 LMSNFTLRIFQDLYNKIY----EMNQEVMP--------------YWLIPTASDIGEYGEG 841
Query: 827 IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHG--PLQLHNGWSSESDVENSLVYA 884
I +++DW +++ F +DR S+ G +++ W +
Sbjct: 842 INPSDAIDWDVLQ-------FVKDHERLDRNSVSPQGLNGRFVYDPWDGKY--------- 885
Query: 885 THKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHL--ISSYGIHL-KHPKQPLLRA----- 936
++F N + PY H ++ I YG+ L K + P L A
Sbjct: 886 ---RYFLRGINTSLRPSDLPPY----FLPHRRYMENIMEYGLSLYKRSRIPFLAACDWGQ 938
Query: 937 ----KPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
L LR L +R L +SE L ++ I + +S P+I
Sbjct: 939 DVYDAELIPLRRNLLDR-LSNSEKQVERRMVLCLETQV----ISAIPATVAASCFAFPAI 993
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSL--------ERLEI 1044
+ R+++ LVA E LL G + A T E E+ ERLE
Sbjct: 994 ITRIDSYLVAHECASLLGLEIQLGYALEAVTKDSDNTEEHRLEQIQFQRGMGKNYERLEF 1053
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD FLK A LF+ E +L R + N NL A + YIR + F
Sbjct: 1054 LGDCFLKMATSISLFVGSPNDQEFDLHVNRMTLICNRNLFNTAKERKIYEYIRSKGFSRR 1113
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
++ G + R G+A +D + S H L +KTIADV EAL+G
Sbjct: 1114 NWYPEGMKLLR---------------GKANED-----KASTHTHGLGEKTIADVCEALIG 1153
Query: 1165 AFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSA-SLDMAT- 1214
A + G KA T + VE A ++ + S + D+A
Sbjct: 1154 ASLLSGGPVNRFDMAVKAVTRLVNSDLHNVESWAGYSSHYSLPSYQIKEANGFEKDLANQ 1213
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFN---RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
++ LG++F + LL AF HPS+ + CYQRLEFLGD++LD + LY +P
Sbjct: 1214 IDKKLGYRFKYPRLLRSAFTHPSYPTAWSIVPCYQRLEFLGDSLLDMVCIENLYERFPDR 1273
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-DYMITPSSTREVK 1330
P LT+ + +V+N+ ++AV + L + SN L I V D + S + V
Sbjct: 1274 DPQWLTEHKMAMVSNKFLGSLAVRLDLHTHLQYFSNPLQGRIAQAVEDAQLAYESHQSVD 1333
Query: 1331 -----EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP 1371
E P PK L D+VE+ LGAI +DSGF+ + + P
Sbjct: 1334 FWIMIEDP--PKCLSDMVEAYLGAIFVDSGFDFGVIESFYAKHIKP 1377
>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1662
Score = 336 bits (861), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 254/778 (32%), Positives = 361/778 (46%), Gaps = 115/778 (14%)
Query: 857 KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDS----- 911
+ +P G L + +G+ + +V A H + V ++ F+ S + D
Sbjct: 937 QEVPPEGKLLIADGFVEVEGLVGRIVTAVHSGKRFYVDSVRFDMTADSSFPQKDGYLGPL 996
Query: 912 --SSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE-------Y 962
+S+ D+ YG+ L KQPLLR + + +NLL R E S L+ Y
Sbjct: 997 EYTSYADYYKQKYGVELVCKKQPLLRGRGVSHCKNLLSPR-FETSTGGTLDSLDALDKTY 1055
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
+ LPPELC + + S G+ LPS+M R+E++L+AI+LKH + +P ++A
Sbjct: 1056 YVMLPPELCLIHPLPGSLVRGAQR--LPSVMRRVESMLLAIQLKHQID--YP----IAAS 1107
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L+ALT CQE FS ER E+LGDA+LK+ V R LFL + EG+LTR R V+NS
Sbjct: 1108 KVLEALTAASCQETFSYERAELLGDAYLKWVVSRRLFLKYPCKHEGQLTRMRQQIVSNSV 1167
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALG------------------------RRCPRICS 1118
L + A LQ YI+ F P ++ A G R I S
Sbjct: 1168 LYQYALDKGLQSYIQADRFAPSRWAAPGVPPVFDEDIKDGDDSDKSLKAEASREVVEIVS 1227
Query: 1119 KETERTIH-------SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
+E E + S DG D S + L KT+ADVVEA +G + + G
Sbjct: 1228 EEGEIVVKELSTESASMEDGEIEGD-------SSAYRVLSSKTLADVVEAFIGIYYVEGG 1280
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
AAT + WIGI VEF+ ++ + + S+D +LE +GH+F R LL++
Sbjct: 1281 QDAATHLMNWIGIPVEFDDAEAELAIGGCEVPETVMLSIDFDSLEASIGHKFRKRSLLVE 1340
Query: 1232 AFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
A H S G CYQRLEF+GDAVLDYLIT +L+ Y L PG+LTDLR+ VNN+ FA
Sbjct: 1341 AITHASRPSSGVPCYQRLEFVGDAVLDYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFA 1400
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESS 1346
VAV SF+ L S+ L I N+V+ + T V + PKVLGD++ES
Sbjct: 1401 RVAVKHSFHLHLRHGSSALETQIRNFVNDIQTELDKPGVNSFGLGDFKAPKVLGDILESI 1460
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG 1406
GA+ LD+ + VWK+ L P++ L ++P+REL E C L++ + + G
Sbjct: 1461 AGALFLDACLETDHVWKVFEPLLQPMVTPETLPMHPVRELQERCQQQAEALEYKASRAGN 1520
Query: 1407 KFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSS 1466
E V G V I + A N +K A ++A++ LK +
Sbjct: 1521 VATVEVYVDG----VQIGS-AQNAQKKMAQKLAARNALVILKEKEV------------TK 1563
Query: 1467 PKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRL 1526
KSEA + SE G S G + T R L
Sbjct: 1564 EKSEA-----------------------ENSEANNGKSSKNGHTNFT---------RQTL 1591
Query: 1527 YELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAE 1584
+LC W P + C E G +H K FTF V V EC+G+P K A +
Sbjct: 1592 NDLCLKRQWPMPQYRCVLEGGPAHAKKFTFSVRVLTTTDGWTEECVGDPMPSVKKAKD 1649
Score = 204 bits (519), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 232/482 (48%), Gaps = 44/482 (9%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + I+FV R+V A+ L + L L +C L+G N
Sbjct: 390 TPKVQSLIKILLRYQHTDDFRAIIFVERVVAAQVLPKVFAELPSLKFVKCASLIGHNNN- 448
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + +FR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 449 QDMRTRQMQETISQFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 508
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS-----SDAFTCS----EER 576
R P S+Y +++ GNQ+ ++N E+ + +E ++RT +A S +
Sbjct: 509 RKPGSDYILMLERGNQQHKVFLRNAKNSEETLRKEAIERTDLGERRENAILASMDLGDRE 568
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
IY+V ++GA +S V L+H YCS+LP D + +P+F + GG + C + LP
Sbjct: 569 IYQVPATGAVVSMNSAVGLIHFYCSQLPSDRYSILRPEFIMNKIESQGGAVRYSCKLQLP 628
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP+ + G +S+ A++ CL+A + LH++GA D LLP + + E + S +
Sbjct: 629 CNAPLENVDGPECNSLRGAQQSVCLEACKRLHEMGAFTDMLLPDKGSGEEAAKVEGSEEG 688
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQ-----FIPDPAD 738
+ G E + + +L+ W K V + Y ++ F D
Sbjct: 689 EPLPGTSRHREYYPEGIADILKGDWILADKDPDAKPGSNVLVYVYMVKCENVGFSKDNLL 748
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRS 798
+F + V L E + +DL +AR L G + ++ L + D
Sbjct: 749 TETSDFVILVGQKLQDEVLDMTMDLFVARTMITRASLEFCGNL------DLSLHELTDLK 802
Query: 799 EFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHKNS-----VDWKIIRRCLSSPVFG 848
F+ + + D + +++ + YL PV +S VDW ++R+ + + +
Sbjct: 803 SFHVRLMSIVLDVNVDPATTPWDPAKAYLFAPVAHKVDSDPLEMVDWGLVRKTIETDSWS 862
Query: 849 TP 850
P
Sbjct: 863 NP 864
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 116/198 (58%), Gaps = 5/198 (2%)
Query: 73 ENIIVYLGTGCGKTHIAVLLIYELAHLIR-KPQKSICIFLAPTVALVQQQAKVIEESIGF 131
+N I +L TG GKT IAVLL+ ++R + ++ + +FL P V LV QQA+VI F
Sbjct: 2 KNTIAFLETGAGKTLIAVLLMKHKYQVLREQGRRMLAVFLVPKVPLVYQQAEVIRNGTNF 61
Query: 132 KVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHH 190
V +CG + W++E D ++ VM QILL L H ++ME I LLI DECHH
Sbjct: 62 VVGHYCGEMGQDFWDARRWQREFDTRDIFVMTAQILLNILRHSIVRMEAIHLLILDECHH 121
Query: 191 AQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
A K HPY+ +M +FY K P +FGMTASPV KG S Q + I +LE+ LD+
Sbjct: 122 AVKK--HPYSLVMSEFYHVTPKDKRPCVFGMTASPVNLKGVSNQEDCAIKIRNLESKLDS 179
Query: 250 KVYSVEDAEDLESFVSSP 267
V +++D ++LE V P
Sbjct: 180 IVCTIKDRKELEKHVPMP 197
>gi|336380656|gb|EGO21809.1| hypothetical protein SERLADRAFT_441040 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1460
Score = 335 bits (858), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 387/1442 (26%), Positives = 620/1442 (42%), Gaps = 252/1442 (17%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R+YQ E+ ++A N+I L TG GKT I++LLI + L K ++ + +FL P VAL
Sbjct: 16 LPRRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIKWIV-LQEKAKRKVIVFLVPKVAL 74
Query: 118 VQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V+QQA I +V+ F G L +W+K +Q ++ V QI L L H
Sbjct: 75 VKQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDLTVAAAQIFLNILTHSHWS 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG-KGASAQAN 235
+E ++LLIFDECHH + NH Y IM ++++ P++FGMTASP+ K A
Sbjct: 135 VEKVSLLIFDECHH--TRKNHAYNGIMHEYFQTIPSDRPKVFGMTASPIWNPKDAEG--- 189
Query: 236 LPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
S+ +LE LDA V +V E E+L+ PV + ++ P + Y T + L+
Sbjct: 190 ---SLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDTYDYLYPTLWDCLSL 246
Query: 295 IKREQYISALSRKLH-DHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
I+ KLH +Q RN+ GA A L + +T
Sbjct: 247 FTNAVEINIPVDKLHMKYQMTRNS--------------------LGAFSADLFLYTDIKT 286
Query: 354 ----MRNELIEAEGNT------------IDDSLCRFASQASEVFAAICRRDGIASDL--- 394
+EL ++ T +D+S SQ + + + D I S+
Sbjct: 287 RLIHFIDELESSQNETFLGLDGFDHHIDVDESSESAQSQFPAISPDLEQIDAILSEFRPF 346
Query: 395 --SCIEVLKEP------FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
S EV P + + K+ L+ +L IVFV + A L+ IL
Sbjct: 347 FDSGTEVPAVPIPVPLAWCTPKVNALVEVLLE-HYSPTFHAIVFVEQRQVAACLAKILPC 405
Query: 447 LKFLASW-RCHFLVG----------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
+ L + RC LVG VN+ + M + +E FR G+LNLLVAT V E
Sbjct: 406 IPELRGYVRCAELVGHGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLVATSVAE 465
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EGL C +V+RFD + + ++QSRGRAR S + + + L F K E
Sbjct: 466 EGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNAFLKSEP 525
Query: 556 RMNREIMDRTSSDAF--------------------TCSEERIYKVDSSGACISAGYGVSL 595
+ R R A ER Y V S+GA ++ V+L
Sbjct: 526 ELKRVYQTREEPAATRLDPGEDSEEGEVEEDDPADVAVRER-YIVPSTGAVLTYDSAVNL 584
Query: 596 LHRYCSKLPHDEFFNPK-PKFYYFDDLGGTICHIILPANAPIHQ----IVGTPQSSMEAA 650
L+ CS +PHD + P+ PK+ G + LP++ P+ G + S A
Sbjct: 585 LNHLCSLIPHDAYTPPQLPKYS-----GDYAVMLELPSSLPLPIDRLFFSGPERRSKREA 639
Query: 651 KKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVP- 709
K+ A+++LH+L +DYLLP SS E RG L VP
Sbjct: 640 KRAVAFLAVKELHRLDVFDDYLLPAT-----------SSKGRGTEDADGRGILDFSDVPD 688
Query: 710 ---AVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
++R WT + Y D D GL + LP K D
Sbjct: 689 LMDVLVRDPWT-----LGAKLYLHIVTIDDQD----VGGLVTGTCLP--PVEFKSD---- 733
Query: 767 RGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLG-----KDDYCESSSSTFY 821
G ++ + ++ + +E D+ SEF+ +G E S+F
Sbjct: 734 -GSTIQLRY--DRVLLFDEDEEW------DQRRMLSEFMRMGLWFCVTGRPAELPFSSF- 783
Query: 822 LLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS--SESDVEN 879
L+P++ +K+ +D++++ R S P GS D WS SE D +
Sbjct: 784 -LVPLLPNKH-IDFEVVERVASEPY-----GSYD---------------WSGASEKDYNH 821
Query: 880 SLVYATHKKWFYLV-TNIVFEKNGYSPY----KDSDSSSHVDHLISSYGIHLKHPKQP-- 932
+V +++ LV NI ++ S K+S+ ++ D+ + + + P
Sbjct: 822 LMVMNSNQYGRALVLRNIRYDLTPLSTTPPGSKESEYPTYRDYFVQRWTRKKREAFVPEN 881
Query: 933 --LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKI--------------I 976
L+ A L R S + + E+ DL +LC+ +I +
Sbjct: 882 SFLIEATYLPRC----------PSSVYRVREHLIDL--DLCKRQIARAGLLVPKDACRRV 929
Query: 977 GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQER 1036
FS+D+ + LLP + R+ ++ A + + + P AE ++L++A T
Sbjct: 930 HFSEDVYRAFLLLPKLCRRVTDVYRARQER--IELGLPMIAE---DLLIEASTLPTTSLT 984
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
F+ +RLE LGD+ LK H+ + EG+L+ R N+V+N LL A L+ ++
Sbjct: 985 FNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSHLRQNSVSNRTLLSRAKEIELERFL 1044
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
+ + F+ ++T+ T+ +R S + ++++
Sbjct: 1045 NSESHN-LHFWRY------TVPEDTDSTL-------------CRIRRSTRREF-PRRSLQ 1083
Query: 1157 DVVEALVG-AFID---DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
D +EA +G AF+ D +A TA G + + S L
Sbjct: 1084 DCMEATLGAAFVTGGIDMALQAGTALGLSFGGPIPWSLKYSRRPESSPAPHL-------F 1136
Query: 1213 ATLEILLGHQFLHRG-LLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
A L+ L ++F HRG LL++A HPSF YQRLEFLGDAV+D ++ +YLY +P+
Sbjct: 1137 ADLQESLCYEF-HRGDLLVEAATHPSFATSASSSYQRLEFLGDAVIDLVVLNYLYRRFPQ 1195
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREV 1329
GQL+ RS V A+++V + +K L+ ++ LS IN +V + + S +
Sbjct: 1196 ANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVEDII 1255
Query: 1330 KEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRE 1385
+G + PK L D++ES +GAI +DS +N V ++ + +L+ NL +P+ E
Sbjct: 1256 NKGWKYDPPKALSDVLESVVGAIFVDSAYNFEKVASVVELIMSDVLELLSPNLPKDPVSE 1315
Query: 1386 LL 1387
L+
Sbjct: 1316 LM 1317
>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1827
Score = 333 bits (854), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 391/1440 (27%), Positives = 607/1440 (42%), Gaps = 234/1440 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ EL +A+ +N+I L TG GKT IAVLL+ EL + K I FL +
Sbjct: 389 RQYQTELFNEAINKNVIAVLDTGSGKTLIAVLLLRHIFAQELEDRAKGLPKRISFFLVDS 448
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ V++ ++ + FCG L WEK +D+ V+V ++L +CL+H
Sbjct: 449 VQLVFQQHAVLKANLDQPMEMFCGDMGIDLWKKSTWEKHLDKNMVIVCTAEVLRHCLHHS 508
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
F+ M I LLIFDE HHA K +H YA+I+KDFY D +P+IFGMTASPV
Sbjct: 509 FLSMAQINLLIFDEAHHA--KKDHAYARIIKDFYVTHEDKHTLPKIFGMTASPV-----D 561
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ ++ K+ LE++L +++ + D + L+ ++ + Y P
Sbjct: 562 ARVDVRKAAAELESILHSQICTASDPKLLQQTITVKQEQAAAYAP--------------- 606
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
L + + + ++ LR K LN D+ K LG A L G+
Sbjct: 607 LGPRFETPLYAQMFERFKNNTVLR---KPLNFAFDATK----ELGAWCADQVWPFCL-GE 658
Query: 352 ETMRNELIEAE----GNTIDDSLCRFASQASEVFAAICRRDGI------ASDLSCIEVLK 401
E + + E I + L +++ A RD + A D +
Sbjct: 659 EECKKLQAKTERKYHAKKIQEPLAVLEKHKAQIQEA---RDIMKAHVYDAPDFTDKTAGS 715
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVG 460
SK +L + + F K I+FVN+ TAR L+ + RC LVG
Sbjct: 716 NNLSSKVVLLVRYLRERFERPTDDKAIIFVNQRYTARLLAKLFSQPNIGTPHLRCGTLVG 775
Query: 461 VNAG----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
+G L R+ + + + FR G +N L AT V EEGLD+ C LV+RFDL T+
Sbjct: 776 TRSGDAGDLNQSFRDQVLT-MGNFRKGNINCLFATSVAEEGLDVPDCNLVVRFDLYTTLI 834
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREIM-DRTS 566
+IQSRGRAR S Y + ++GN ++ K E+ + NR++ +
Sbjct: 835 QYIQSRGRARHQNSRYIHMYEAGNTEHATIMLEVRKNENILRKFCEALPENRKLTGNDYD 894
Query: 567 SDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
D F E+ RIYK S+GA ++ +++L + LPH + N +P++
Sbjct: 895 MDHFLAKEKSHRIYKT-STGAKLTYKMSLTVLANFVDSLPHAQDTNLQPEYIITVHNRHF 953
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEP 684
IC ILP +P VG P S+ + AK A + L K L+++LLP T+ P
Sbjct: 954 ICETILPEGSPFRGSVGRPCSTKQVAKCSAAFETCLGLVKCKLLDEHLLP---TFTKQLP 1010
Query: 685 MLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVR-LNFYFMQFIPDPADRIYRE 743
+ ++ + + E +EM L W+ P Y + P DR +
Sbjct: 1011 AMRNA---LLAVDSKKREAYEMKTKPTL---WSVGGVPEEFFATYLVLDNPKVLDRPSQP 1064
Query: 744 FGLFVKSLLP---------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVI 794
L +S LP G H V++ ++ +S+ K P I Q F ++L
Sbjct: 1065 LVLLTRSRLPQLPSFYLHFGSNRHSPVEM-VSIAQSI--KATPEVIAQINTFT-IYL--- 1117
Query: 795 LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI----FHKNS-----VDWKIIRRCLSSP 845
FN F L + D + Y L P I N+ + W ++ + +
Sbjct: 1118 -----FNDVFSKLYESDVAKMP----YFLAPGISLSEVTANTDLSSLIAWDVL-KAVEDH 1167
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESD--VENSLVY----ATHKKWFYLVTNIVFE 899
V D KS W +E D ++ + + K W VT +
Sbjct: 1168 VIKWADNPWDNKS------------WQTEPDEFFKDKFIVDPYDGSRKLWTIGVTR---D 1212
Query: 900 KNGYSPYKDSDSSSH----VDHLISSYGIHLK---------HPKQPLLRAKPLFRLRNLL 946
+ P + + H ++ I Y L P Q ++ A+ + RNLL
Sbjct: 1213 HSPLGPVPPNSAPRHGTRKNNNNIMEYSCSLWSKARARRTFDPNQRVVEAEFISLRRNLL 1272
Query: 947 HNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ + E ++ F L P LKI + + + P+I+HRLE+ L+A+E
Sbjct: 1273 D--EFDTPEEEIPKKCFVILEP----LKISPIPTSVVAMAYVFPAIIHRLESYLIALEAC 1326
Query: 1007 HLLSASFPEGAEVSAEMLLKALT----------TEKCQERFSL----ERLEILGDAFLKY 1052
LL+ ++ ++ L+A T TE+ + + ERLE LGD FLK
Sbjct: 1327 QLLN------LKIRPDLALEACTKDSDNSEDHGTEQVNFQRGMGNNYERLEFLGDCFLKM 1380
Query: 1053 AVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRR 1112
A LF +H DE R + N NL A + L YIR Q F ++ G
Sbjct: 1381 ATSISLFGIHPENDEYSYHVDRMMLICNKNLKNNAVKLKLYQYIRSQAFSRRAWYPEG-- 1438
Query: 1113 CPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG-AFIDDSG 1171
+ K+ + + H L K+IADV EAL+G A +
Sbjct: 1439 ---LVLKQ------------------GKTAAAPTTHKLGDKSIADVCEALIGAALLTYHE 1477
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT---------LEILLGHQ 1222
K A ++ + V E QVT K + L AT LE +
Sbjct: 1478 SKDMDAAVRAVTELVSSENHQVTCFADYYKLYKKPKYQLAQATEMQRNLAAQLEQEHPYH 1537
Query: 1223 FLHRGLLLQAFVHPSFN---RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
F + L AF HPS+ YQRLEFLGD++LD ++LY +P P LT+
Sbjct: 1538 FKYPRLARSAFTHPSYPYSYEHVPSYQRLEFLGDSLLDMACINFLYHAFPDKDPQWLTEH 1597
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRC---- 1335
+ +V+NQ + V F++ L+ + + I++YV IT + T+ + R
Sbjct: 1598 KMAMVSNQFLGALCVSLGFHRHLLLFNAGFQKQISDYVT-DITEARTQAEADAVRAGKSP 1656
Query: 1336 --------------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLN 1381
PK L D+VE+ +GAI +DS +N + ++ F D +K+ L ++
Sbjct: 1657 QDCNPDYWTSVRQPPKCLPDVVEAYIGAIFVDSEYN----YAVIEDFFDRHIKWYFLDMS 1712
>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
Length = 1662
Score = 330 bits (847), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 252/778 (32%), Positives = 360/778 (46%), Gaps = 115/778 (14%)
Query: 857 KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDS----- 911
+ +P G L + +G+ + +V A H + + ++ F+ S + D
Sbjct: 937 QEVPPEGKLLIADGFVEVEGLVGRIVTAVHSGKRFYMDSVRFDMTADSSFPQKDGYLGPL 996
Query: 912 --SSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE-------Y 962
+S+ D+ YG+ L KQPLLR + + +NLL R E S L+ Y
Sbjct: 997 EYTSYADYYKQKYGVELVCKKQPLLRGRGVSHCKNLLSPR-FETSTGGTLDSLDALDKTY 1055
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
+ LPPELC + + S G+ LPS+M R+E++L+AI+LKH + +P ++A
Sbjct: 1056 YVMLPPELCLIHPLPGSLVRGAQR--LPSVMRRVESMLLAIQLKHQID--YP----IAAS 1107
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L+ALT CQE FS ER E+LGDA+LK+ V R LFL + EG+LTR R V+NS
Sbjct: 1108 KVLEALTAASCQETFSYERAELLGDAYLKWVVSRRLFLKYPCKHEGQLTRMRQQIVSNSV 1167
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALG------------------------RRCPRICS 1118
L + A LQ YI+ F P ++ A G R I S
Sbjct: 1168 LYQYALDKGLQSYIQADRFAPSRWAAPGVPPVFDEDIKDGDDSDKSLKAEASREVVEIVS 1227
Query: 1119 KETERTIH-------SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
+E E + S DG D S + L KT+ADVVEA +G + + G
Sbjct: 1228 EEGEIVVKELSTESASMEDGEIEGD-------SSAYRVLSSKTLADVVEAFIGIYYVEGG 1280
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
AAT + WIGI VEF+ ++ + + S+D +LE +GH+F R LL++
Sbjct: 1281 QDAATHLMNWIGIPVEFDDAEAELAIGGCEVPETVMLSIDFDSLEASIGHKFRKRSLLVE 1340
Query: 1232 AFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
A H S G YQRLEF+GDAVLDYLIT +L+ Y L PG+LTDLR+ VNN+ FA
Sbjct: 1341 AITHASRPSSGVPGYQRLEFVGDAVLDYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFA 1400
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESS 1346
VAV SF+ L S+ L I N+V+ + T V + PKVLGD++ES
Sbjct: 1401 RVAVKHSFHLHLRHGSSALETQIRNFVNDIQTELDKPGVNSFGLGDFKAPKVLGDILESI 1460
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG 1406
GA+ LD+ + VWK+ L P++ L ++P+REL E C L++ + + G
Sbjct: 1461 AGALFLDACLETDHVWKVFEPLLQPMVTPETLPMHPVRELQERCQQQAEALEYKASRAGN 1520
Query: 1407 KFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSS 1466
E V G V I + A N +K A ++A++ LK +
Sbjct: 1521 VATVEVYVDG----VQIGS-AQNAQKKMAQKLAARNALVILKEKEV------------TK 1563
Query: 1467 PKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRL 1526
KSEA + SE G S G + T R L
Sbjct: 1564 EKSEA-----------------------ENSEANNGKSSKNGHTNFT---------RQTL 1591
Query: 1527 YELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAE 1584
+LC W P + C E G +H K FTF V V EC+G+P K A +
Sbjct: 1592 NDLCLKRQWPMPQYRCVLEGGPAHAKKFTFSVRVLTTTDGWTEECVGDPMPSVKKAKD 1649
Score = 203 bits (516), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 232/482 (48%), Gaps = 44/482 (9%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + I+FV R+V A+ L + L L +C L+G N
Sbjct: 390 TPKVQSLIKILLRYQHTDDFRAIIFVERVVAAQVLPKVFAELPSLKFVKCASLIGHNNN- 448
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + +FR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 449 QDMRTRQMQETISQFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 508
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS-----SDAFTCS----EER 576
R P S+Y +++ GNQ+ ++N E+ + +E ++RT +A S +
Sbjct: 509 RKPGSDYILMLERGNQQHKVFLRNAKNSEETLRKEAIERTDLGERRENAILASMDLGDRE 568
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
IY+V ++GA +S V L+H YCS+LP D + +P+F + GG + C + LP
Sbjct: 569 IYQVPATGAVVSMNSAVGLIHFYCSQLPSDRYSILRPEFIMNKIESQGGAVRYSCKLQLP 628
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP+ + G +S+ A++ CL+A + LH++GA D LLP + + E + S +
Sbjct: 629 CNAPLENVDGPECNSLRGAQQSVCLEACKRLHEMGAFTDMLLPDKGSGEEAAKVEGSEEG 688
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQ-----FIPDPAD 738
+ G E + + +L+ W K V + Y ++ F D
Sbjct: 689 EPLPGTSRHREYYPEGIADILKGDWILADKDPDAKPGSNVLVYVYMVKCENVGFSKDNLL 748
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRS 798
+F + V L + + +DL +AR L G + ++ L + D
Sbjct: 749 TETSDFVILVGQKLQDQVLDMTMDLFVARTMITRASLEFCGNL------DLSLHELTDLK 802
Query: 799 EFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHKNS-----VDWKIIRRCLSSPVFG 848
F+ + + D + +++ + YL PV +S VDW ++R+ + + +
Sbjct: 803 SFHVRLMSIVLDVNVDPATTPWDPAKAYLFAPVAHKVDSDPLEMVDWGLVRKTIETDSWS 862
Query: 849 TP 850
P
Sbjct: 863 NP 864
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 116/198 (58%), Gaps = 5/198 (2%)
Query: 73 ENIIVYLGTGCGKTHIAVLLIYELAHLIR-KPQKSICIFLAPTVALVQQQAKVIEESIGF 131
+N I YL TG GKT IAVLL+ ++R + ++ + +FL P V LV QQA+VI F
Sbjct: 2 KNTIAYLETGAGKTLIAVLLMKHKYQVLREQGRRMLAVFLVPKVPLVYQQAEVIRNGTNF 61
Query: 132 KVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHH 190
V +CG + W++E D ++ VM QILL L H ++ME I LLI DECHH
Sbjct: 62 VVGHYCGEMGQDFWDARRWQREFDTRDIFVMTAQILLNILRHSIVRMEAIHLLILDECHH 121
Query: 191 AQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
A K HPY+ +M +FY K P +FGMTASPV KG S Q + I +LE+ LD+
Sbjct: 122 AVKK--HPYSLVMPEFYHVTPKDKRPCVFGMTASPVNLKGVSNQEDCAIKIRNLESKLDS 179
Query: 250 KVYSVEDAEDLESFVSSP 267
V +++D ++LE V P
Sbjct: 180 IVCTIKDRKELEKHVPMP 197
>gi|425772078|gb|EKV10503.1| RNA helicase/RNAse III, putative [Penicillium digitatum Pd1]
gi|425777255|gb|EKV15436.1| RNA helicase/RNAse III, putative [Penicillium digitatum PHI26]
Length = 1372
Score = 330 bits (845), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 391/1408 (27%), Positives = 606/1408 (43%), Gaps = 269/1408 (19%)
Query: 79 LGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKV 133
L TG GKT +AVLL+ EL + + FL TV LV QQ+ V+ ++ KV
Sbjct: 81 LDTGSGKTLVAVLLLKHILQMELNKRAHGTKPRVAFFLVDTVTLVFQQSAVLRNNLDQKV 140
Query: 134 RTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQ 192
F G L W+K +++Y V+V +IL L + I+++ I LLIFDE HHA
Sbjct: 141 AHFFGNLGPDLWDKQTWDKHLEKYMVIVCTAEILNQSLLNGHIRIDQINLLIFDEAHHA- 199
Query: 193 VKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKV 251
K HP+A+I++D Y K DI PRIFGMTASPV A+ +L ++ LE LLD+++
Sbjct: 200 -KKEHPFARIIRDAYLKADIENRPRIFGMTASPV-----DAKCDLAEAAVQLETLLDSRI 253
Query: 252 YSVEDAEDLESFVSSP--VVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLH 309
+ D L +FV+ P V VY P ++T+
Sbjct: 254 ATTSDLTLLRNFVNKPMEVEWVYDKLPPPSETNL-------------------------- 287
Query: 310 DHQSLRNTTKQLNRLHDSMKFC----LENLGVCGALHASYILLSGDETMRNELIEAEGNT 365
H +L+ + L +F E G C + L DE + +E
Sbjct: 288 -HSTLKTKYGDMLILEGVFRFASVASTELGGWCA--DQVWALALADEVLPK--LEGSIGK 342
Query: 366 IDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQH 424
+ DS R + +ASE I + ++ S KL L+G L F
Sbjct: 343 VTDSDPRDSEKASEEIKRIQEASHLVNEYITDRAFMPSDLSPKLELLMGKLQEQFAKSPD 402
Query: 425 MKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG----LKSMSRNAMKSILEKF 480
KCIVF R TA+ + + + L+ + + R LVGV G + S R +L KF
Sbjct: 403 TKCIVFTQRRNTAKVMLQLCEKLQ-IPNLRPEILVGVRKGDAIGMNSTFRRQFL-VLAKF 460
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
R E+N L AT V EEGLDI C LV+RFDL +T ++QSRGRAR S YA +V+ GN
Sbjct: 461 RKSEVNCLFATSVAEEGLDIPDCNLVVRFDLYDTFIQYVQSRGRARRADSVYATMVECGN 520
Query: 541 ----------QRELDLIKNFSK--EEDRMNREIMDRTSSDAFTCSEE---RIYKVDSSGA 585
+R L+KNF ED R++ EE R Y V +GA
Sbjct: 521 RNHSMRLQEVRRAEHLMKNFCNLLPED---RKLYGDGHDMGVLVHEENRKRTYTVTRTGA 577
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS 645
++ + + +L R+ S L ++ + K + + C +I+P +P+ +++G +S
Sbjct: 578 MLTYRHAIGVLARFASSLQYENEISAKVTYVVMSENESFSCEVIMPEKSPVRRVLGCCES 637
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEG 698
AK+ A A L K L+++ LP NA + + S +D Y+
Sbjct: 638 KKSLAKQSAAFDACLLLRKRNLLDEHFNSVYHKRLPAMRNA---KLAITSKRTDQYKMRT 694
Query: 699 SRGELHEMLVPAVLRQSWTKSQ--YPVRLNFYFMQFIP-DPADRIY-------RE----- 743
P++ W + Q P+RL ++ IP +P R + RE
Sbjct: 695 K---------PSI----WARQQGTIPIRLYAILIRLIPSEPLTRAHGSIVLLSREQITAI 741
Query: 744 --FGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE-F 800
F +F+ + + L +D L + ++V + + F ++F K SE F
Sbjct: 742 PTFPVFLDDDIETTVQSLCIDGCLEVASEEL-EIVTAFTLAV--FHDVFHKTYKHVSEQF 798
Query: 801 NSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLP 860
VP +D S+S F + +DW ++ +P
Sbjct: 799 PYWLVPAREDIDVGMSTSLF----------DIIDWTALKYVQDNPKL------------- 835
Query: 861 SHGPLQLHNGWSSESDVENSLVYATHKKWF--YLVTNIVFEKN--------GYSP-YKDS 909
WS++ + E+ L + W Y + + N Y+P K S
Sbjct: 836 ---------VWSTDMEPESLLNRFIYDDWNGKYRYFPLAVDPNLRPSDPPPSYAPCRKWS 886
Query: 910 DSSSHVDHLISSYGIHL---KHPK--------QPLLRAKPLFRLRNLLHNRKLEDSESHE 958
D I ++ + L PK QP+L+A+ + RN L K+ D E +
Sbjct: 887 DD-------IMNWSLSLSKNSRPKFFNRCIWTQPVLQAELVCLRRNFLD--KMADEE--K 935
Query: 959 LEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAE 1018
L + P+ L I SK + ++ + P+I+ R+E+ L+A E LL
Sbjct: 936 LSNSRCVICPQPLVLSTI--SKSVAATCFVFPAIITRMESYLIAEEGCKLLGL-----GG 988
Query: 1019 VSAEMLLKALT--TEKCQERFSL------------ERLEILGDAFLKYAVGRHLFLLHDT 1064
+ E L+ALT ++ +E SL ERLE+LGD+ LK A LF+ +
Sbjct: 989 IKLEFALEALTKDSDNTEEHRSLQIHVQRGMGKNYERLELLGDSVLKMATSISLFVQNPD 1048
Query: 1065 VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERT 1124
DE + R + N NL K A L +IR + F ++ G
Sbjct: 1049 DDEYDYHVNRMCLICNKNLFKNATELKLYEFIRSRGFSRHMWYPPG-------------- 1094
Query: 1125 IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI----DDSGFKAATAFLK 1180
+ +Y GR +A+ S+G H L +KTIADV EAL+GA + DD + A +K
Sbjct: 1095 LSLEY-GRD----HAKFVDSEGKHSLSEKTIADVCEALIGASLLSGGDDHRYDMA---VK 1146
Query: 1181 WIGIQVEFEASQVTNI--CISSKSFLPLSASLDMATLEILL--------GHQFLHRGLLL 1230
+ + V + T+ IS+ S +PL E+ L G++F + LL
Sbjct: 1147 AVTVFVNSQKHTATSWKDYISAYS-IPLYQKKAADGFEMNLAQQIFEKVGYEFKYPRLLR 1205
Query: 1231 QAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
AF HPS+ CYQRLE+LGDA+LD + +L+ +P P LT+ + +V+N+
Sbjct: 1206 SAFTHPSYPLTWAKVPCYQRLEYLGDALLDMVCVEHLFHRFPTRDPQWLTEHKMAMVSNK 1265
Query: 1288 AFANVAVD-------QSFYKFLIFDSNVLSETI-------NNYVDYMITPSSTREVKEGP 1333
+AV Q F L+ ++ +E + N V+Y ++ S +
Sbjct: 1266 FLGALAVKLGLHLHLQHFSNPLMIQNSKYAEELQLAESESNGEVNYWLSTSDS------- 1318
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTV 1361
PK L D++E+ LGAI +DS F+ +
Sbjct: 1319 --PKCLPDMLEAYLGAIFVDSSFDFTVI 1344
>gi|50399920|gb|AAT76308.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
Length = 585
Score = 328 bits (842), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 205/577 (35%), Positives = 314/577 (54%), Gaps = 46/577 (7%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLNPH-NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L +++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRL----NKKHIEALDRKLHG-SSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L ++L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA----FT 571
SFIQSRGRARM S+Y LV G+ + F M E + S T
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENT 548
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF 608
E+ Y+V+S+ A ++ V L+H +CSKLP D+
Sbjct: 549 LCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDDL 585
>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
Length = 1886
Score = 327 bits (839), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 243/764 (31%), Positives = 362/764 (47%), Gaps = 80/764 (10%)
Query: 861 SHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS-----DSSS 913
S G L + +G D+ +V A H + V +I ++ + + P K+ + ++
Sbjct: 1172 SKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNT 1231
Query: 914 HVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYFDDLPPELC 971
+ D+ YG+ L +QPL++ + + +NLL R + ES + + Y+ LPPELC
Sbjct: 1232 YADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELC 1291
Query: 972 QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE 1031
+ + S G+ LPSIM R+E++L+A++LK+L+S P +L+ALT
Sbjct: 1292 VVHPLSGSLIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSKILEALTAA 1343
Query: 1032 KCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L + A
Sbjct: 1344 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKG 1403
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDLNAEVRCSK 1145
LQ YI+ F P ++ A G P + ++T+ S +D D+ +
Sbjct: 1404 LQSYIQADRFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMED 1461
Query: 1146 G--------HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNIC 1197
G + L KT+ADVVEAL+G + + G AA +KWIGI VE + +V
Sbjct: 1462 GELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL 1521
Query: 1198 ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVL 1256
+ + S+D LE L ++F +GLL++A H S G CYQRLEF+GDAVL
Sbjct: 1522 KNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVL 1581
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+ L + I +
Sbjct: 1582 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 1641
Query: 1317 VDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
V + T SS + PKVLGD+VES GAI LDSG + WK+ L P+
Sbjct: 1642 VKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPM 1701
Query: 1373 LKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSR 1432
+ L ++P+REL E C L++ + + G E VFI +++
Sbjct: 1702 VTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVE---------VFIDGVQVGVAQ 1752
Query: 1433 KEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFE 1492
++A + AA E + E IN A ++
Sbjct: 1753 NPQKKMAQKLAARNALAA-----------------LKEKEIAESKEKHINNGNAGEDQ-- 1793
Query: 1493 KLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLK 1552
E + G+ + P R L ++C W P++ C KE G +H K
Sbjct: 1794 ----GENENGNKKNGHQP----------FTRQTLNDICLRKNWPMPSYRCVKEGGPAHAK 1839
Query: 1553 LFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
FTF V V ECIGEP K A + AA +L L +
Sbjct: 1840 RFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1883
Score = 327 bits (837), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 239/746 (32%), Positives = 355/746 (47%), Gaps = 107/746 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA+VI F+V +CG G S W++E + +VLVM QILL L H I
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQVLVMTAQILLNILRHSII 367
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQA 234
+ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q
Sbjct: 368 RMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-----INDTSSSYVTCS 289
+ I +LE LD+ V +++D ++LE V P V +Y +++T +
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 290 EQLAEIK----REQYISALS-------RKLHDHQSLRNTTKQLNRLHD--SMKFCLENLG 336
E+ A+ + Q++ A R+++ + N +H ++ + L LG
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELG 545
Query: 337 VCGALHASYILLSG---DET--------------------MRNELIEA------------ 361
A LS DE ++ EL+E
Sbjct: 546 QWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGK 605
Query: 362 -----------EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
EG DD + EV A + + + K+
Sbjct: 606 PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGA---------------AVADGKVTPKVQ 650
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSR 470
LI +L ++ + IVFV R+V A L + L L+ RC ++G N + M
Sbjct: 651 SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNS-QEMKS 709
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S
Sbjct: 710 SQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGS 769
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCSEERIY 578
+Y +V+ GN ++N E+ + +E ++RT S DA + +Y
Sbjct: 770 DYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT---VY 826
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPAN 633
KV+++GA +S V L+H YCS+LP D + +P+F + GG C + LP N
Sbjct: 827 KVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCN 886
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
AP + G SSM A++ CL A + LH++GA D LLP + + + E + +
Sbjct: 887 APFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEP 946
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKS 719
G E + V VL+ W S
Sbjct: 947 VPGTARHREFYPEGVADVLKGEWVSS 972
>gi|336270596|ref|XP_003350057.1| hypothetical protein SMAC_00946 [Sordaria macrospora k-hell]
gi|380095449|emb|CCC06922.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1586
Score = 326 bits (835), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 384/1469 (26%), Positives = 611/1469 (41%), Gaps = 292/1469 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A ++N I L TG GKT IA +L+ EL + + I FL
Sbjct: 123 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVINGELEDREKGFPRRIAFFLVDK 182
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
VALV QQ + +++ F + CG + ++S W++ ++ EV+V +IL L+H
Sbjct: 183 VALVFQQHSFLTKNLDFPMEKLCGEMMEGVESKAFWKEALEHNEVVVCTAEILNTALHHS 242
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKGASA 232
+I+M+ I LLIFDE HH K +HPYA+I+K+FY + + + PRI G+TASPV
Sbjct: 243 WIRMDQINLLIFDEAHH--TKKDHPYARIIKNFYVDEKLERRPRILGLTASPV------- 293
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
DA V A +LE+ + S + T++ + ++
Sbjct: 294 ---------------DANVDPGRAAAELEALLHSQIA-----------TAADPASLQPKI 327
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
K E + +R D ++ N KQL +L + + + + ++ D
Sbjct: 328 CRPKAELLVE-YARGRPDSETALN--KQLRKLVGGQELFKKPVNFTTSAASTLGPWCVDR 384
Query: 353 TMR-----NELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV-----LKE 402
+ ++++ E T D + AS E+ ++ A +L L
Sbjct: 385 YWQLYFKQEDIVKLEARTERDLMK--ASALGEITEKNVKQVRDAHELVNAHTFLPAALDP 442
Query: 403 PFFSKKLLRLIGIL-STFRLQ-QHMKCIVFVNRIVTARALSYILQN---LKFLASWRCHF 457
FS K++ L+ IL F +CIVFV + TA L+ +LQ + S
Sbjct: 443 AMFSDKVIMLVRILRDQFETGVGTQRCIVFVRQRNTAMLLADLLQQPGIKSHIPSIVAEV 502
Query: 458 LVG--------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
LVG VNA + +N I+ KF+ GE+N L AT V EEGLDI C +VIRF
Sbjct: 503 LVGGGTTGSGYVNAKVNFQQQN---RIIRKFKLGEINCLFATSVAEEGLDIPDCNIVIRF 559
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NRE 560
DL +T+ +IQSRGRAR P S Y +++ GN I K ED + +R+
Sbjct: 560 DLYDTLIQYIQSRGRARRPDSRYIQMIEKGNPEHYTKIVQAKKAEDTLRNFCKALPEDRK 619
Query: 561 IMDRTSSDAFTCSEE---RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
+ D + + +E R Y V +GA +S + L + + LPH + P++Y
Sbjct: 620 LTDNHMNLDYLLRKEKGKRQYTVPETGAKLSYMQSLICLANFTATLPHPPETSLSPEYYI 679
Query: 618 FDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQED 677
GG C +++P +PI VG S AAK A + L K G L+++L
Sbjct: 680 TTVPGGFQCEVVMPDASPIKSAVGKIHVSKGAAKCAAAFELCLALLKAGHLDNHL----- 734
Query: 678 NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRL------------ 725
+F+ +L EM + S K++Y +RL
Sbjct: 735 ------QSVFTK------------QLPEMRNARLAVSSKKKTEYAMRLKPELWSVRGEVT 776
Query: 726 NFYFMQFI---PDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVP-SGIM 781
Y F PD R R L +S LP E L R + VP G +
Sbjct: 777 QLYATAFFLENPDARGRSSRPLLLLSRSGLP---EVASFPLFFGTKRFSKVRCVPIQGSV 833
Query: 782 QAQ-----QFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWK 836
+A+ Q +K +D F+ E+ E++++ L + + D++
Sbjct: 834 EAEDTLVEQLTRFTMKAFMDV--FSKEY---------EATAADLPYFLSPMDGGHGFDFR 882
Query: 837 IIRRCLSSPVFGTPGGSVDRKSL---------------------------PSHGPLQL-- 867
+ + +P +DRK+L P G +
Sbjct: 883 LAK---------SPADLIDRKTLAYVSGNEKVPYTFLEPDEFFQDKFIVDPYDGARKFFT 933
Query: 868 ---HNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLIS-SYG 923
+ V + +V H+ W L T D ++ + L + S G
Sbjct: 934 RHRRHDMKPTDPVPDGIVQPNHRAWKGLGTT-------------HDILNYSNSLWAKSRG 980
Query: 924 IHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGF 978
+ QP++ A+ + R+ L + L++ DL P+ C L+I
Sbjct: 981 FMVFQADQPVVEARLISTRRDFLDDAILDE-----------DLEPQPCFLALEPLRISPI 1029
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKC----- 1033
D+ + L PSI+HR+E+ LVA++ LL G ++ ++ L+A T +
Sbjct: 1030 PADVAAMLLCFPSIIHRVESNLVALDACKLL------GLDLRPDLALEAFTKDSDNSNEH 1083
Query: 1034 ---QERF------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
Q F + ERLE LGD+FLK A ++ L E E R + N NLL
Sbjct: 1084 DVEQVNFQTGMGDNYERLEFLGDSFLKMATTMSIYTLIPDKGEFEYHVERMLLICNKNLL 1143
Query: 1085 KLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCS 1144
A L+ YIR F+ Q++ G + +K+ +
Sbjct: 1144 NNALEVGLEEYIRSMSFNRRQWYPEGLVLKKGKNKD-----------------------A 1180
Query: 1145 KGHHWLHKKTIADVVEALVGA-FID-------DSGFKAATAFLKWIGIQVEFEASQVTNI 1196
+ H L K+IADV EAL+GA ++ D KA TA ++ ++
Sbjct: 1181 RTRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVRDKKHRMMNYGDYYAVY 1240
Query: 1197 CISSKSFLPL-SASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFL 1251
S P SA DMA +G++F H LL AF HP++ L YQRLEFL
Sbjct: 1241 QKPSWQTAPANSAQRDMADKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLPSYQRLEFL 1300
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GDA+ D + YL+ +P P LT+ + +V+NQ ++ FYK + S + +
Sbjct: 1301 GDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSYHLGFYKCVATMSPSILK 1360
Query: 1312 TINNYV---DYMITPSSTREVKEG-----------------PRCPKVLGDLVESSLGAIL 1351
I YV + + + V +G R PK L D+VE+ +GAI
Sbjct: 1361 DIAEYVTEIEEALEAAKQEAVNQGKAPEEYSRDYWVHITHVSRLPKCLSDVVEAYIGAIF 1420
Query: 1352 LDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
+DS ++ + V + + + P F ++ L
Sbjct: 1421 VDSEYDYSVVQQFFTTHVLPF--FEDMHL 1447
>gi|85105148|ref|XP_961898.1| hypothetical protein NCU08270 [Neurospora crassa OR74A]
gi|74616659|sp|Q7S8J7.1|DCL1_NEUCR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl-1; Includes: RecName:
Full=ATP-dependent helicase dcl-1
gi|28923482|gb|EAA32662.1| predicted protein [Neurospora crassa OR74A]
Length = 1584
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 400/1508 (26%), Positives = 630/1508 (41%), Gaps = 291/1508 (19%)
Query: 26 AVVEECSVA----VSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGT 81
A +E VA + +GF +E + + R+YQ+EL ++A ++N I L T
Sbjct: 95 AAIEAARVAGVDVLPAIGFDSERIITS----------PREYQVELFERAKQQNTIAVLDT 144
Query: 82 GCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTF 136
G GKT IA +L+ EL + + I FL VALV QQ + +++ F +
Sbjct: 145 GSGKTLIAAMLLRWVITGELEDREKGLPRRIAFFLVDKVALVFQQHSFLTKNLDFPMEKL 204
Query: 137 CGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKS 195
CG + ++S W++ ++Q EV+V +IL L+H +I+M+ I LLIFDE HH K
Sbjct: 205 CGEMVEGVESKAFWKEALEQNEVVVCTAEILSTALHHSWIRMDQINLLIFDEAHH--TKK 262
Query: 196 NHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
+HPYA+I+K+FY + + PRI G+TASPV A+ + ++ LE LL +++ +
Sbjct: 263 DHPYARIIKNFYIDEQLERRPRILGLTASPV-----DAKVDPRRAAAELEALLHSQIATA 317
Query: 255 EDAEDLESFVSSPVVR-VYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQS 313
D L+ + P V +Y + S ++QL ++ Q + +
Sbjct: 318 ADPAALQHTICKPKTELVVEY---VRGRPDSETVLNKQLRKLVGGQELF--------KKP 366
Query: 314 LRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRF 373
L TT ++L +C + + L T R+ + A + I + +
Sbjct: 367 LNFTTSAASKLG---TWCADRYWQLFFKQEDIVKLES-RTERDLMKVAALDEITEKHVKQ 422
Query: 374 ASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTF--RLQQHMKCIVFV 431
+A E+ + + L S K++ L+ IL R +CI+FV
Sbjct: 423 VREAHEL---------VNAHTFSPAALDPTMLSSKVIMLVRILRDQFERGVGAQRCIIFV 473
Query: 432 NRIVTARALSYILQNLKF---LASWRCHFLVG--------VNAGLKSMSRNAMKSILEKF 480
+ TA L+ +LQ + + S LVG VNA + +N I+ KF
Sbjct: 474 RQRNTAMLLADLLQQPEIKSHIPSIAAEVLVGGGTTGSSYVNAKINFQQQN---RIIRKF 530
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
+ GE+N L AT V EEGLDI C +VIRFDL +T+ IQSRGRAR P S Y +++ GN
Sbjct: 531 KLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRPDSRYIQMIEKGN 590
Query: 541 ----QREL------DLIKNFSKE--EDR------MNREIMDRTSSDAFTCSEERIYKVDS 582
R L D+++ F + EDR MN + + R +R Y V
Sbjct: 591 YEHHSRILRAKGAEDVLRKFCEALPEDRKLTGNHMNLDYLLRKEKG------KRQYTVPD 644
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGT 642
+GA +S + L + + LPH + P++Y GG C +++P +PI VG
Sbjct: 645 TGAKLSYMQSLVCLANFTATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGK 704
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDEPMLFSSDSDSYE 695
S AK A + L K G L+++L LP+ NA + SS +
Sbjct: 705 VHLSKGVAKCAAAFELCLALLKAGHLDNHLQSVFTKQLPEMRNAR----LAVSSKKKTEY 760
Query: 696 GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGE 755
+ EL V V+ Q + + F+ PD R R L +S LP
Sbjct: 761 AMRLKPELWS--VRGVVTQLFATA---------FVLENPDTLGRSSRPLLLLSRSALP-- 807
Query: 756 AEHLKVDLHLARGRSVMTKLVP-SGIMQA-----QQFQEMFLKVILDRSEFNSEFVPLGK 809
E L R + VP G +QA +Q LK +D F+ E+
Sbjct: 808 -EVASFPLFFGTKRFSKVRCVPIPGSVQADDTLVEQLTRFTLKAFMDV--FSKEY----- 859
Query: 810 DDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSL---------- 859
E+++ L + + D+++ + +P +DRK+L
Sbjct: 860 ----EATAVNLPYFLSPMDGGHGFDFRLAK---------SPAHLIDRKALAYVSENEKVP 906
Query: 860 -----------------PSHGPLQL-----HNGWSSESDVENSLVYATHKKWFYLVTNIV 897
P G + + V + +V H+ W L T
Sbjct: 907 YTFLEPDDFFQDKFVVDPYDGARKFFTHHRRHDMKPTDPVPDGIVAPNHRAWRGLGTT-- 964
Query: 898 FEKNGYSPYKDSDSSSHVDHLIS-SYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES 956
D ++ + L S S G + QP++ A + R+ L + L D E
Sbjct: 965 -----------HDILNYSNSLWSKSRGFMIFQADQPVVEAALISTRRDFLDD-TLRD-ED 1011
Query: 957 HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
E ++ F L P ++I D+ + L PSI+HR+E+ LVA++ LL G
Sbjct: 1012 VEPQQCFLILEP----MRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLL------G 1061
Query: 1017 AEVSAEMLLKALTTEKC--------QERF------SLERLEILGDAFLKYAVGRHLFLLH 1062
++ ++ L+A T + +E F + ERLE LGD+FLK A ++ L
Sbjct: 1062 LDLRPDLALEAFTKDSDNSDEHDAEKENFQTGMGDNYERLEFLGDSFLKMATTIAIYTLI 1121
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
E E R + N NL A L+ YIR F+ Q++ G + SK+
Sbjct: 1122 PDKGEFEYHVERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQWYPEGLILKKGKSKD-- 1179
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FID-------DSGFKA 1174
++ H L K+IADV EAL+GA ++ D KA
Sbjct: 1180 ---------------------ARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKA 1218
Query: 1175 ATAFLK-----WIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGL 1228
TA +K I + Q S + SA DMA +G++F H L
Sbjct: 1219 VTAMVKDKKHRMISYGDYYAVYQKPTWQTESAN----SAQRDMAKKFSERMGYKFKHPRL 1274
Query: 1229 LLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
L AF HP++ L YQRLEFLGDA+ D + YL+ +P P LT+ + +V+
Sbjct: 1275 LRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVS 1334
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-----------ITPSSTRE------ 1328
NQ ++ F K + S + + I YV + I T +
Sbjct: 1335 NQFLCCLSFHLGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEAINAGKTADEYSRDY 1394
Query: 1329 ---VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRE 1385
+ R PK L D+VE+ +GAI +DS ++ + V F N+ + P E
Sbjct: 1395 WVHITHASRLPKCLSDVVEAYIGAIFVDSEYDYSVVQ-----------NFFNMHVLPFFE 1443
Query: 1386 LLELCNSY 1393
+ L +++
Sbjct: 1444 DMHLYDTF 1451
>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
Length = 1552
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 390/1452 (26%), Positives = 609/1452 (41%), Gaps = 273/1452 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL ++A +N I L TG GKT IAVLL L H+++ KP + + F
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLL---LRHVLQNELNDRANGKPHR-VSFF 179
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V L QQA V+ +I V F G L WE+ + Q V+V +IL C
Sbjct: 180 LVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQC 239
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGK 228
L + ++M I LLIFDE HH K +HPYA+I++D ++K + PRIFGMTASP+ K
Sbjct: 240 LLNSHVRMNQINLLIFDEAHH--TKKDHPYARIIRDSYFKASPPQRPRIFGMTASPIDTK 297
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G ++ + LE LLD+++ + L VS P+ +V+ Y
Sbjct: 298 G-----DIIAAATRLETLLDSRIATTSKITLLRQVVSRPIEKVWAY-------------- 338
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLR-NTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
++ S LH R K L + + LG + A
Sbjct: 339 ---------DRLESPFKTNLHKLMENRFGNVKALEGVFRFAWYASSELGRWCSDRAWLYA 389
Query: 348 LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSK 407
L+ D + +E N + +S A++ F I AS++ +P F
Sbjct: 390 LADDVLPK---LEGHVNKLAESTAA-ATERDMAFKEITLIKE-ASNIVKAHTFNDPEFPG 444
Query: 408 KLLRLIGILSTFRLQQHM------KCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV 461
+L + +L T L +H KCI+F + TA+ L + L + R L+GV
Sbjct: 445 ELSPKVRLLQT-ELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILS-IPHLRPGVLIGV 502
Query: 462 NAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+G + M+ + L KFR GE+N L AT V EEGLDI C LV+RFDL T+ +
Sbjct: 503 RSGDIGGMNITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQY 562
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT------SSD 568
+QSRGRAR S YA +V+ N ++ + E M E + DR D
Sbjct: 563 VQSRGRARHYHSTYASMVEKDNSDHEARLREVREAEKTMQNFCETLPEDRILHGNDHDLD 622
Query: 569 AFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKL------------------PHDEF 608
+ EE R + V S+GA ++ +++L RY S L +++
Sbjct: 623 SLLQHEEGRRTFTVKSTGARLTYHSAIAILARYASSLVRSSNHALMASYIDNTWKQYEKE 682
Query: 609 FNPKPKFYYFDDLGGT-ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
P+ Y +G T +C +ILP +PI + G+P AK+ A L +
Sbjct: 683 TTPQAT-YVVQSVGNTYVCEVILPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLLRRHKL 741
Query: 668 LNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ 720
L+D+ LP NA + + S ++ Y+ +L P++ R+ +
Sbjct: 742 LDDFFKSIYHKRLPAMRNA---KLAITSKKTNQYDM---------LLKPSIWRRH--QGI 787
Query: 721 YPVRLNFYFMQFIP-DPADRIYREFGLFVKSLLPG-EAEHLKVDLHLARGRSVMTKLVPS 778
P +L + +P +P R ++ + + LP A + +D + TK+VP
Sbjct: 788 LPSKLYGTILSLLPSEPLSREHQPILVLTREKLPDFPAFPIYLD------EDIETKVVPR 841
Query: 779 GIMQAQQFQEMFLKVILDRSEFNSE-FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKI 837
+ + L+ + + F F + Y + S Y L P
Sbjct: 842 SLDTGMELSAEELRAL---TTFTLRIFRDVFHKVYEQESEKLPYWLAP------------ 886
Query: 838 IRRCLSSPVFGT-----PGGSVDRKSLP---SHGPLQLHNGWSSESDVENSLVYATHKKW 889
+ P+ P G +D K++ + + + ES V N ++ KW
Sbjct: 887 -----AEPLDANGREPGPRGIIDWKTVTFVQENDEIVFSRDLAPESLV-NRFMF---DKW 937
Query: 890 -----FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLK-----------HPKQPL 933
F+ + + + P H+D+++S Y + L H QP+
Sbjct: 938 DGRSRFFTIKVMEGLRAADPPPSSVPRRRHMDNIMS-YCLSLSKNSRARFLAGCHWDQPV 996
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIM 993
L+A+ + RNLL KL E E F P LKI I S+ P+I+
Sbjct: 997 LQAELVRLRRNLLD--KLTTEEKKIQTECFICAEP----LKISAIPPSIASTCLAFPAII 1050
Query: 994 HRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERF------------SL 1039
RL++ L++IE L + ++ L+A+T ++ +E +
Sbjct: 1051 TRLDSYLISIEACDELDLV------IRSDYALEAVTKDSDNTEEHRGQQIHFQRGMGKNY 1104
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ERLE LGD FLK A LF + DE + R + N NL A + + YIR +
Sbjct: 1105 ERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNTAKKRQIYRYIRSR 1164
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
F ++ G + K+ + + SQ H L +KTIADV
Sbjct: 1165 SFSRHVWYPDG--LTLLQGKDHSKKMLSQ-----------------AKHALGEKTIADVC 1205
Query: 1160 EALVGAFI--------DDSGFKAATAFL--------KW---IGI------QVEFEASQVT 1194
EAL+GA + D G KA + F+ +W IG+ QV T
Sbjct: 1206 EALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAET 1265
Query: 1195 NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS-----FNRLGGCYQRLE 1249
N+ + +E LG+ F + LL A HPS + R+ CYQRLE
Sbjct: 1266 NLALQ---------------VEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRV-PCYQRLE 1309
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGD++LD + L+ +P P LT+ + +V+N+ +AV F+K + SN L
Sbjct: 1310 FLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPL 1369
Query: 1310 SETINNYVDYMITPSSTRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
I YV+ + T + E V + P PK L D+VE+ LGAI +DS F+ +
Sbjct: 1370 QAQITYYVEEIETAEAESEGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSDFSFEVIE 1427
Query: 1363 KIMLSFLDPILK 1374
+ + P +
Sbjct: 1428 AFFQAQIKPYFQ 1439
>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
Length = 1541
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 381/1399 (27%), Positives = 590/1399 (42%), Gaps = 198/1399 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A + N I L TG GKT IAVLL+ E+ + + I FL +
Sbjct: 103 REYQIELFERAKKRNTIAVLDTGSGKTLIAVLLLRWVIDNEIENRAKGMPVKISFFLVAS 162
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ V+E ++ K+ CG + W+KE + +V+V +IL L H
Sbjct: 163 VTLVYQQFSVLESNLDHKIARLCGADNTDRWDGARWQKEFYENKVVVCTAEILNQALAHS 222
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASA 232
+I+M I LLIFDE HH K NH YA+I+KDFY D PRIFGMTASP+ K
Sbjct: 223 YIRMSQINLLIFDEAHH--TKKNHSYARIVKDFYLMEDPATRPRIFGMTASPIDAKMDVI 280
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY---------GPVINDTSS 283
QA LE+LLD+K+ + D E+ + P V Y ++ D S
Sbjct: 281 QAAW-----ELESLLDSKIATTSDMSLTEA-IKKPAEHVMGYESLPRTDYETDLLRDVKS 334
Query: 284 SY------VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV 337
Y E+ AEI L R D LR + + K + +
Sbjct: 335 RYEHIPVFSNVFERAAEIA-----CHLGRWCADSYILRAFSHE--------KAGKYEMDI 381
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
HA + E++E +DD++ + E + R + L
Sbjct: 382 EKKFHARRV--------SREMVE-----LDDAV----KEIREAVEYVQTRRNVLDKLVHA 424
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
++ + + LR L RL H +CIVFV+R TAR L + L R HF
Sbjct: 425 DISSKVLELHRYLR----LQFERLSDH-RCIVFVDRRYTARMLHILFSRLS-TPHMRGHF 478
Query: 458 LVGVNAG---LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
LVG N G S + L +FR GE+N L AT V EEGLD+ C L+IRFD+ T
Sbjct: 479 LVGSNNGGLDEDSFTFRQQVMTLMRFRKGEINCLFATSVAEEGLDVPDCNLIIRFDMYTT 538
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT---SS 567
+ ++QSRGRAR S++ +++ GN + E M R E++ DR +
Sbjct: 539 MIQYVQSRGRARNRNSKFIHMIEIGNSTHSQTLNEVRYAEATMRRYCELLPEDRKLQGNQ 598
Query: 568 DAFTCSEERIYKVDS-----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D+ ER +++ SGA ++ +S+L + + +P E P+ Y G
Sbjct: 599 DSLEVLLEREKNMETRVDPISGAKLTYANALSILAHFVTAVP-TESDEPQHPTYVVSTRG 657
Query: 623 GT-ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-QEDNAT 680
I +ILP ++P+ +G AK+ A A L G LN+ L+P +
Sbjct: 658 QKYIAEVILPGSSPLRSKIGKIHQKKSLAKRSAAFDACVYLRTQGHLNENLVPVYQKKLP 717
Query: 681 EDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRI 740
L + D + G G + + P + + + P L + F P+ DR
Sbjct: 718 AMRNALLAVDMKATSGYGMQ------IKPKIWAEQ--RGLRPGELWITIVDF-PEGLDRP 768
Query: 741 YREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEF 800
++ L ++ +P ++ S T LV S ++ L R F
Sbjct: 769 HQALALLTRTPMP------QLPAFAVYRNSGDTTLVKSASLRLPLIVTDERLARLSRFTF 822
Query: 801 NSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLP 860
F + Y E S Y L PV V K+ L + P ++D L
Sbjct: 823 RV-FEDVFSKVYEEDSLKLSYWLAPV-----KVQLKVAADSLETEQDINPATAIDWALLE 876
Query: 861 ---SHGPLQLHNGWSSESDVENSLV--YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHV 915
+H + G + V +V + +K+F + + ++ P +D++ H
Sbjct: 877 EVFAHDEYKWIPGMPHGNFVNKFIVDKWDGSRKFFSVGVDPSLKQTDPIP-EDANKGKHG 935
Query: 916 DHLISSYGIHLKHP---------KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDL 966
++ +Y + L QP++ + RN+L E E + + + +
Sbjct: 936 SSIL-AYSVSLWKKSRSKFTYAENQPVIETQLAILRRNML--APPEKKEVEGITKAY--V 990
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS---------ASFPEGA 1017
PEL LK + +I +S + PSI+HR E+ L+ IE + A+F + +
Sbjct: 991 CPEL--LKFSALTPEIATSCIVWPSIIHRFESYLICIEGCDTIGLDCGPRFALAAFTKDS 1048
Query: 1018 EVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNA 1077
+ E + + ++ + ERLE +GD FLK A F+ + +E RR
Sbjct: 1049 DNQGEHETERVNFQRGMGE-NYERLEFIGDTFLKTATTISTFIQNPNENEFAFHVRRMQM 1107
Query: 1078 VNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC---PRICSKETERTIHSQYDGRAP 1134
+ N NL +A + L YIR F+ ++ G + + + + H
Sbjct: 1108 LCNKNLFGVALKLKLYEYIRSIAFNRRYWYPEGLKLLSGTGVIKGQEKENFH-------- 1159
Query: 1135 DDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI---DDSGFKAA---TAFLKWIGIQVEF 1188
E R +H L +KTIADV EAL+GA D G A T +K + V+
Sbjct: 1160 -----EPR----NHDLGEKTIADVCEALIGAAYLTWDQPGAWQAEHWTNAVKAVTTLVDS 1210
Query: 1189 EASQVTN-----ICISSKSFLPLSASL---DMA-TLEILLGHQFLHRGLLLQAFVHPS-- 1237
+ ++ S + A+ D+A +E ++F + LL AF+HPS
Sbjct: 1211 DDHRMLTWDDYRTAYSKPHYQTAEATAVQRDLAQKVEREHAYRFKYPRLLYSAFMHPSVP 1270
Query: 1238 -FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
N YQRLEFLGDA+LD ++L++ YP P LT+ + +V+N+ V V+
Sbjct: 1271 YINEKVPNYQRLEFLGDALLDQASITWLFNKYPDKDPQWLTEHKMAMVSNKFLGAVCVNI 1330
Query: 1297 SFYKFLIFDSNVLSETINNYV--------------DYMITPSSTREVKEGPRCPKVLGDL 1342
F+K L VL I Y DY T V + P+C L D+
Sbjct: 1331 GFHKHLRHYHAVLQSQITAYAADLMEAKRIAGDSRDYWTT------VSDPPKC---LPDI 1381
Query: 1343 VESSLGAILLDSGFNLNTV 1361
VE+ +GA+ +DS FN V
Sbjct: 1382 VEAYIGALFIDSDFNYGEV 1400
>gi|302766077|ref|XP_002966459.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
gi|300165879|gb|EFJ32486.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
Length = 497
Score = 320 bits (821), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 295/535 (55%), Gaps = 45/535 (8%)
Query: 74 NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKV 133
N IV L TGCGKT IAVLLI L+HL RKP+K IC+FLAPTV+L +QQA+VIE V
Sbjct: 2 NTIVCLETGCGKTMIAVLLIRSLSHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLYV 61
Query: 134 RTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQV 193
T+ GG+ + H W + + EV VM P ILL L HRF + + LLIFDECHH
Sbjct: 62 GTYVGGTSTMDVHW-WTTHLQKQEVFVMTPAILLDNLRHRFFNPDHVELLIFDECHHC-- 118
Query: 194 KSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA--SAQANLPKSINSLENLLDAKV 251
HPYA IM +FY K PRI GMTASP+VGKG S +S + LE +L +K+
Sbjct: 119 AKGHPYANIMSEFYHKPEAKCPRILGMTASPIVGKGKTWSGPQAFKESFDCLETMLRSKI 178
Query: 252 YSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDH 311
+ D E+L SF+ S +++ +Y P DT + T + L+R+
Sbjct: 179 ITFAD-EELTSFLPSSDMKIKEYLP---DTKGKHRTTD-------IDNRFENLTREF--- 224
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
L + +N++++++ +CL LG+ A A+ I+L+G + +G + +
Sbjct: 225 -GLPEERQAVNKIYNTLNYCLFELGLFSARKAAEIMLAG--------CDGKGRDAEAAFL 275
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFV 431
R E A + DG A D + S K+ L+ +L ++ Q ++CIVFV
Sbjct: 276 RRVLNILEEKAIL---DGTADD-------QIRAISSKVQLLLDVLDEYKSAQDLRCIVFV 325
Query: 432 NRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVAT 491
R++ A+ L+ +L + ++ R + LK ++ ++ LE FR+G+ N++VAT
Sbjct: 326 ERVIAAKVLTLLLNSRPYV---RAQCVASHRNKLKGLTLATQRNSLEDFRAGKANVIVAT 382
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS 551
V EEGLDIQ+C LVIRF++P+T S IQSRGRAR S+Y L++SGN E L+
Sbjct: 383 NVAEEGLDIQSCSLVIRFNMPKTERSSIQSRGRARKQGSDYVILMESGNLNEEKLLHAIL 442
Query: 552 KEEDRMNRE---IMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL 603
+ E M+ + + D F ++ Y V+S+GA ++ VSLLH+YCS L
Sbjct: 443 EGEKLMHGQLHSVQDTYEHQLFYLQKD-AYHVESTGAVVNIDSSVSLLHQYCSTL 496
>gi|336470988|gb|EGO59149.1| hypothetical protein NEUTE1DRAFT_60268 [Neurospora tetrasperma FGSC
2508]
gi|350292065|gb|EGZ73260.1| hypothetical protein NEUTE2DRAFT_107618 [Neurospora tetrasperma FGSC
2509]
Length = 1583
Score = 320 bits (820), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 398/1498 (26%), Positives = 627/1498 (41%), Gaps = 284/1498 (18%)
Query: 20 ICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYL 79
I AA SA V+ + +GF +E + + R+YQ+EL ++A ++N I L
Sbjct: 96 IEAARSAGVD----VLPAIGFDSERIITS----------PREYQVELFERAKQQNTIAVL 141
Query: 80 GTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVR 134
TG GKT IA +L+ EL + + I FL VALV QQ + +++ F +
Sbjct: 142 DTGSGKTLIAAMLLRWVINGELEDREKGLPRRIAFFLVDKVALVFQQHSFLTKNLDFPME 201
Query: 135 TFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQV 193
CG + ++S W++ ++Q EV+V +IL L+H +I+M+ I LLIFDE HH
Sbjct: 202 KLCGEMVEGVESKAFWKEALEQNEVVVCTAEILSTALHHSWIRMDQINLLIFDEAHH--T 259
Query: 194 KSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVY 252
K +HPYA+I+K+FY + + PRI G+TASPV A+ + ++ LE LL +++
Sbjct: 260 KKDHPYARIIKNFYIDEQLERRPRILGLTASPV-----DAKVDPRRAAAELEALLHSQIA 314
Query: 253 SVEDAEDLESFVSSPVVR-VYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDH 311
+ D L+ + P + +Y + S ++QL ++ Q +
Sbjct: 315 TAADPAALQHTICKPKTELIVEY---VRGRPDSETVLNKQLRKLVGGQELF--------K 363
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
+ L TT ++L +C + + L T R+ + A + I +
Sbjct: 364 KPLNFTTSAASKLG---TWCADRYWQLFFKQEDIVKLES-RTERDLMKVAALDEITEKHV 419
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTF--RLQQHMKCIV 429
+ +A E+ + + L S K++ L+ IL R +CI+
Sbjct: 420 KQVREAHEL---------VNAHTFSPAALDPTMLSSKVIMLVRILRDQFERGVGAQRCII 470
Query: 430 FVNRIVTARALSYILQNLKF---LASWRCHFLVG--------VNAGLKSMSRNAMKSILE 478
FV + TA L+ +LQ + + S LVG VNA + +N I+
Sbjct: 471 FVRQRNTAMLLADLLQQPEIKSHIPSIAAEVLVGGGTTGSSYVNAKINFQQQN---RIIR 527
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KF+ GE+N L AT V EEGLDI C +VIRFDL +T+ IQSRGRAR P S Y +++
Sbjct: 528 KFKLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRPDSRYIQMIEK 587
Query: 539 GN----QREL------DLIKNFSKE--EDR------MNREIMDRTSSDAFTCSEERIYKV 580
GN R L D+++ F + EDR MN + + R +R Y V
Sbjct: 588 GNYEHHSRILRAKGAEDVLRKFCEALPEDRKLTGNHMNLDYLLRKEKG------KRQYTV 641
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV 640
+GA +S + L + + LPH + P++Y GG C +++P +PI V
Sbjct: 642 PDTGAKLSYMQSLVCLANFTATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAV 701
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDEPMLFSSDSDS 693
G S AK A + L K G L+++L LP+ NA + SS +
Sbjct: 702 GKVHLSKGVAKCAAAFELCLALLKAGHLDNHLQSVFTKQLPEMRNAR----LAVSSKKKT 757
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFY-FMQFIPDPADRIYREFGLFVKSLL 752
+ EL W+ +L+ F+ PD R R L +S L
Sbjct: 758 EYAMRLKPEL------------WSVRGVVTQLSATAFVLENPDTLGRSSRPLLLLSRSAL 805
Query: 753 PGEAEHLKVDLHLARGRSVMTKLVP-SGIMQA-----QQFQEMFLKVILDRSEFNSEFVP 806
P E L R + VP G +QA +Q LK +D F+ E+
Sbjct: 806 P---EVASFPLFFGTKRFSRVRCVPIPGSVQADETLVEQLTCFTLKAFMDV--FSKEY-- 858
Query: 807 LGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSL------- 859
E+++ L + + D+++ + +P +DRK+L
Sbjct: 859 -------EATAVNLPYFLSPMDGGHGFDFRLAK---------SPAHLIDRKTLAYVSENE 902
Query: 860 --------------------PSHGPLQL-----HNGWSSESDVENSLVYATHKKWFYLVT 894
P G + + V + +V H+ W L T
Sbjct: 903 KVPYTFLEPDDFFQDKFVVDPYDGARKFFTHHRRHDMKPTDPVPDGIVAPNHRAWRGLGT 962
Query: 895 NIVFEKNGYSPYKDSDSSSHVDHLIS-SYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED 953
D ++ + L S S G + QP++ A + R+ L + L D
Sbjct: 963 T-------------HDILNYSNSLWSKSRGFMIFQADQPVVEAALISTRRDFLDD-TLRD 1008
Query: 954 SESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
E E ++ F L P ++I D+ + L PSI+HR+E+ LVA++ LL
Sbjct: 1009 -EDVEPQQCFLILEP----MRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLL---- 1059
Query: 1014 PEGAEVSAEMLLKALTTEKC--------QERF------SLERLEILGDAFLKYAVGRHLF 1059
G ++ ++ L+A T + +E + + ERLE LGD+FLK A ++
Sbjct: 1060 --GLDLRPDLALEAFTKDSDNSDEHDAEKENYQTGMGDNYERLEFLGDSFLKMATTIAIY 1117
Query: 1060 LLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSK 1119
L E E R + N NL A L+ YIR F+ Q++ G + SK
Sbjct: 1118 TLIPDKGEFEYHVERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQWYPEGLILKKGKSK 1177
Query: 1120 ETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FID-------DSG 1171
+ ++ H L K+IADV EAL+GA ++ D
Sbjct: 1178 D-----------------------ARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDLA 1214
Query: 1172 FKAATAFLK-----WIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLH 1225
KA TA +K I + Q N + SA DMA LG+ F H
Sbjct: 1215 IKAVTAMVKDKKHRMISYGDYYAVYQKPNWQTDPAN----SAQRDMAKKFSERLGYSFKH 1270
Query: 1226 RGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
LL AF HP++ L YQRLEFLGDA+ D + YL+ +P P LT+ +
Sbjct: 1271 PRLLRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMA 1330
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-----------DYMITPSSTRE--- 1328
+V+NQ ++ F K + S + + I YV + I +T +
Sbjct: 1331 MVSNQFLCCLSFHLGFNKCIATMSPSILKDIAEYVAEIEEALEAAKEEAIKAGTTADEYS 1390
Query: 1329 ------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
+ R PK L D+VE+ +GAI +DS ++ + V + + P F ++ L
Sbjct: 1391 RDYWVHITHASRLPKCLSDVVEAYIGAIFVDSEYDYSVVQNFFNTHVLPF--FEDMHL 1446
>gi|357140713|ref|XP_003571908.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3b-like [Brachypodium distachyon]
Length = 1414
Score = 320 bits (819), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 263/932 (28%), Positives = 424/932 (45%), Gaps = 125/932 (13%)
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK---PQKSICIFLAPTVAL 117
+YQ+E+ + A+ N I L TG GKT +AV+L E +R P++++ +FLAPTV L
Sbjct: 22 RYQVEVFEAALVGNTIAVLDTGSGKTMVAVMLAREHVRRVRAGEAPRRTV-VFLAPTVHL 80
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ +VI E T C G+ + S W++E+ E+ VM PQILL L H F+
Sbjct: 81 VHQQFEVISEYTDLDA-TECYGASGVGGWSAEHWKEEVGSKEIAVMTPQILLDALRHAFV 139
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
M +++LLI DECH A NHPY +IMK
Sbjct: 140 TMSVVSLLILDECHRAC--GNHPYTQIMK------------------------------- 166
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA-- 293
VY ++D +LESF S P ++N +Y+ E L
Sbjct: 167 ---------------VYIIKDRSELESF-SPPAT-------IVNKYYDAYLVDFEDLKSK 203
Query: 294 -EIKREQYISAL-------SRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGALHAS 344
+I E++ + L K D ++ T+ K L R H + + L LG
Sbjct: 204 LQILFEEFDALLVSLQESSPNKFEDTNNILETSRKSLCRYHGKILYGLNYLGP------- 256
Query: 345 YILLSGDETMRNELIEAEGNTID-------DSLCRFASQASEVFAAICRR---DGIASDL 394
I+ + + +E I+A G++ D + + +A ++ + + + + S+
Sbjct: 257 -IITAEVVKIYSESIKALGDSEDCFSKAGFNLHVSYFKEALDLIQEVLPQGYDELMKSES 315
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR 454
E+ K + S K+ LI I +F + C++FV RI+TA+A+ ++ + + +
Sbjct: 316 GSAELSKRGYISSKVDTLINIFKSFGSSNEVLCLIFVERIMTAKAVERFMRGIVNFSRFS 375
Query: 455 CHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
+L G + ++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP T
Sbjct: 376 ISYLTGGSTSKDALSPAVQQFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRT 435
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR---TSSDAFT 571
V+S++QSRGRAR S Y +++ GN + + I + E + + R SS
Sbjct: 436 VSSYVQSRGRARKSSSNYVLMIERGNMEQQEQIFRIIQTEYYIKHFALYRRANVSSYDLP 495
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
++ Y VDS+GA I+A V+L+ +YC KLP D ++ PKP + + G C +ILP
Sbjct: 496 MQDKHTYHVDSTGATITAECCVNLIRKYCEKLPKDRYYMPKPSYEMAVEDGSYQCTLILP 555
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NA +I+G S+ AK+ L+A + LH+LG L+D+L+P + + +
Sbjct: 556 PNAAFQRIIGPSCSTGNLAKQLVSLEACKKLHQLGELDDHLVPLTEGPMDIGNSRTNEKC 615
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSL 751
S G R ELH L +WT V LN Y F D Y F L ++S
Sbjct: 616 ISGPGTTKRKELHGTTSVLALTGTWTHESENVSLNAYRFDFRCDQEGENYAGFVLLMESA 675
Query: 752 LPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR------ 797
L + K+DL L + V T + P G +Q + FQE F I R
Sbjct: 676 LDDDVACSKMDLFLIPNKMVYTTITPCGKIQLNKKQLREGKLFQEFFFNGIFGRLFHGSR 735
Query: 798 -SEFNSEFVPLGKDDYCESSSSTFYLLLPVIF-----HKNSVDWKIIRRCLSS-----PV 846
S EF+ K + SS + YLLLP+ + H S++W+ I C + +
Sbjct: 736 TSGVQREFI-FRKGYEIQWSSESMYLLLPLCYSSHIQHDLSINWEAIGFCTDALEQLRNM 794
Query: 847 FGTPG----GSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNG 902
+ G + +S+ + + N S +++S+V + H Y V +++ +
Sbjct: 795 YTEDGNLHANFIQCRSIKGEDMIHMANKSLRVSSIKDSVVLSLHTGRIYSVLDLIIDTTA 854
Query: 903 YSPYKDSDSSSHVDHLISSYGIHLKHPKQPLL 934
+ + + L+ IH + P + L+
Sbjct: 855 EDSFDEMYGPTGNPLLMEKEQIHARVPPELLI 886
Score = 274 bits (700), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 224/405 (55%), Gaps = 9/405 (2%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A+TT +C E FSLERLE+LGD+ LKY +G LFL + EG L+ RS AV N+ L
Sbjct: 890 ILEAITTLRCCETFSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNAKL 949
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERTIHSQYDGRAPDDLNA 1139
K +LQ YIRD FDP ++ A G R P C ET + R
Sbjct: 950 HKHGVWRSLQGYIRDSAFDPRRWVAPGQISLRPFPCNCGIETSFVPTNGMYIRDDPSFVV 1009
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICIS 1199
C KGH W+ KTI+D VEALVGA+ G AA ++W GI+++ + V + ++
Sbjct: 1010 GKPCDKGHRWMCSKTISDCVEALVGAYYVGGGIIAALWVMRWFGIEIKCDRKLVQEVKLN 1069
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLD 1257
+ L + D+ LE+ L + F +GLLL+A HPS G CYQRLEFLGD VLD
Sbjct: 1070 ASYICYLPKTNDIDELEVKLKYNFSVKGLLLEAITHPSAQESGVDYCYQRLEFLGDCVLD 1129
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
LIT YLY + + PG+LTDLRS LV+N+ FA V + + L S VL E I YV
Sbjct: 1130 LLITQYLYVTHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGVLLEQITEYV 1189
Query: 1318 DYMI-TPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
+ + E + C PKVLGD++ES GAI +D+ FN++ +W I+ L P++
Sbjct: 1190 RFNLECQGKENEFLQHSTCKVPKVLGDIMESIAGAIFIDTDFNVDLLWNIVEPLLSPMIT 1249
Query: 1375 FSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDK 1419
NL L P RELLELC+ + KG + + E V +D+
Sbjct: 1250 PENLALPPYRELLELCSHLGYFINSKYSSKGEEVIIEMSVQLRDE 1294
>gi|302800610|ref|XP_002982062.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
gi|300150078|gb|EFJ16730.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
Length = 497
Score = 319 bits (818), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 294/534 (55%), Gaps = 43/534 (8%)
Query: 74 NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKV 133
N IV L TGCGKT IAVLLI L+HL RKP+K IC+FLAPTV+L +QQA+VIE V
Sbjct: 2 NTIVCLETGCGKTMIAVLLIRSLSHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLYV 61
Query: 134 RTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQV 193
T+ GG+ + H W + + EV VM P ILL L HRF + + LLIFDECHH
Sbjct: 62 GTYVGGTSTMDVHW-WTTHLQKQEVFVMTPAILLDNLRHRFFNPDHVELLIFDECHHC-- 118
Query: 194 KSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA--SAQANLPKSINSLENLLDAKV 251
HPYA IM +FY K PRI GMTASP+VGKG S +S + LE +L +K+
Sbjct: 119 AKGHPYANIMSEFYHKPEAKCPRILGMTASPIVGKGKTWSGPQAFKESFDCLETMLRSKI 178
Query: 252 YSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDH 311
+ D E L SF+ S +++ ++ P DT + T + L+R+
Sbjct: 179 ITFADKE-LTSFLPSSDMKIKEHLP---DTKGKHRTTD-------IDNRFENLTREFR-- 225
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
L + +N++++++ +CL LG+ A A+ I+L+G + +G + +
Sbjct: 226 --LPEERQAVNKIYNTLNYCLFELGLFSARKAAEIMLAG--------CDGKGRDAEAAFL 275
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFV 431
R E A + DG A D + S K+ L+ +L ++ Q ++CIVFV
Sbjct: 276 RRVLNILEEKAIL---DGTADD-------QIRAISSKVQLLLDVLDEYKSAQDLRCIVFV 325
Query: 432 NRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVAT 491
R++ A+ L+ +L + ++ R + LK ++ ++ LE FR+G+ N++VAT
Sbjct: 326 ERVIAAKVLTLLLNSRPYV---RAQCVASHRNKLKGLTLATQRNSLEDFRAGKANVIVAT 382
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS 551
V EEGLDIQ+C LVIRF++P+T S IQSRGRAR S+Y L++SGN E L+
Sbjct: 383 NVAEEGLDIQSCSLVIRFNMPKTERSSIQSRGRARKQGSDYVILMESGNLNEEKLLHAIL 442
Query: 552 KEEDRMNREI--MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL 603
+ E M+ ++ + T ++ Y V+S+GA ++ VSLLH+YCS L
Sbjct: 443 EGEKLMHEQLHTVQDTYDHQLFYRQKDAYHVESTGAVVNIDSSVSLLHQYCSTL 496
>gi|62320294|dbj|BAD94606.1| CAF protein [Arabidopsis thaliana]
Length = 690
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 235/700 (33%), Positives = 340/700 (48%), Gaps = 73/700 (10%)
Query: 918 LISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYFDDLPPELCQLKI 975
L YG+ L +QPL++ + + +NLL R + ES + + Y+ LPPELC +
Sbjct: 40 LFIRYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHP 99
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQE 1035
+ S G+ LPSIM R+E++L+A++LK+L+S P +L+ALT CQE
Sbjct: 100 LSGSLIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSKILEALTAASCQE 151
Query: 1036 RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L + A LQ Y
Sbjct: 152 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSY 211
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDLNAEVRCSKG--- 1146
I+ F P ++ A G P + ++T+ S +D D+ + G
Sbjct: 212 IQADRFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELE 269
Query: 1147 -----HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSK 1201
+ L KT+ADVVEAL+G + + G AA +KWIGI VE + +V +
Sbjct: 270 GDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVN 329
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLI 1260
+ S+D LE L ++F +GLL++A H S G CYQRLEF+GDAVLD+LI
Sbjct: 330 VPESVLKSIDFVRLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLI 389
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
T +L+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+ L + I +V +
Sbjct: 390 TRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEV 449
Query: 1321 ITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFS 1376
T SS + PKVLGD+VES GAI LDSG + WK+ L P++
Sbjct: 450 QTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPE 509
Query: 1377 NLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAI 1436
L ++P+REL E C L++ + + G E + G V A N +K A
Sbjct: 510 TLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGV-----AQNPQKKMAQ 564
Query: 1437 RIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKI 1496
++A++ + LK K +S+ + I N A +D
Sbjct: 565 KLAARNALAALKE--------------KEIAESKEKHIN------NGNAGEDQ------- 597
Query: 1497 SEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTF 1556
E + G+ + P R L ++C W P++ C KE G +H K FTF
Sbjct: 598 GENENGNKKNGHQP----------FTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTF 647
Query: 1557 RVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
V V ECIGEP K A + AA +L L +
Sbjct: 648 GVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 687
>gi|400595165|gb|EJP62972.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1465
Score = 316 bits (810), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 382/1444 (26%), Positives = 603/1444 (41%), Gaps = 226/1444 (15%)
Query: 26 AVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGK 85
V+ + + G+G A + V A R+YQ EL ++A +N IV L TG GK
Sbjct: 36 GVIPAANAPLEGLGDAAAAEVSALMA------TPREYQNELFERAKSKNTIVVLDTGSGK 89
Query: 86 THIAVLLI-----YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGS 140
T IA++L+ EL + F+ VAL QQ +VI ++ F V F G
Sbjct: 90 TLIAIMLLRHVLEQELEDRANGGTRKTAFFVVDKVALCMQQYQVIHATLPFSVTKFYGEL 149
Query: 141 KRL-KSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPY 199
+ L +S W+ + D+ ++V Q+LL CL H FI M I LLIFDE HHA K HPY
Sbjct: 150 QPLEQSQTHWDAQFDENMIIVCTAQMLLDCLSHGFINMRQINLLIFDEVHHA--KKEHPY 207
Query: 200 AKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAED 259
A IMK +Y D PRI G+TASPV + ++ ++ LE+L+ +++ +V DA
Sbjct: 208 AAIMKRYYPRDNNVKPRILGLTASPV----DTGTLDIETAVEKLESLMCSEIATVSDAV- 262
Query: 260 LESFVSS--PVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT 317
LE+ + +V Y P + D Y + + E
Sbjct: 263 LEAGWTKREQKEKVRLYKP-LKDVKDCYTKLARDIDEF---------------------- 299
Query: 318 TKQLNRLHDSMKFCLENLGVCGALHAS--YILLSGDETMRNELIE-AEGNTIDDSLCRF- 373
+ + +L S++F + G A + +L D+ MRN ++ +G + S R+
Sbjct: 300 AQHVPQLAASVQFSAKIGSALGPWCADRFWQILLTDDLMRNMAVQLGKGKKTNFSYDRYD 359
Query: 374 -ASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFV 431
AS A E I A + E S KL+ L L + F + KC+VFV
Sbjct: 360 AASGALESLRPIIDHHRFAPAST-----DEDAISSKLVVLRETLCAAFEEESETKCLVFV 414
Query: 432 NRIVTARALS-YILQNLKFLASWRCHFLVGVNAGL--KSMSRNAMKSILEKFRSGELNLL 488
+ A L+ Y Q F++G+ ++S L F+ G N L
Sbjct: 415 DEQFMAMILADYFSQPGTAPQGMIADFMIGLAKSFAHANLSLRERMQKLNDFKHGNTNCL 474
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
AT V EEGLDI C LVIRFD+ + +IQSRGRAR S Y +++ N + L+ +
Sbjct: 475 FATSVAEEGLDIPACDLVIRFDMCISAIQYIQSRGRARKASSVYITMMEQDNNQHLNRFR 534
Query: 549 NFSKEEDRMNREIM----DRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLP 604
N + + + R DR+ E+ + D+ A +S +++L R+ S L
Sbjct: 535 NVTFDAQCLRRFCQKLPPDRSIGIYERPPEKELLVADT--ATLSTQNSMAVLARFVSTLA 592
Query: 605 HDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHK 664
+PKP++ C +ILP +AP + G + S A+ A +A L +
Sbjct: 593 QGMDRSPKPEYVVCATGTNFTCWVILPDSAPFNSTTGILERSKVRARCAAAYEACTRLIE 652
Query: 665 LGALNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT 717
+G++N L LP+ NA + SS + +++ MLV + WT
Sbjct: 653 MGSINKNLQPTFKKNLPRMRNAR----LALSS---------KKQKVYTMLVKPKM---WT 696
Query: 718 K--SQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKL 775
+ P L F+Q +PD A L + LP + L ++ + KL
Sbjct: 697 SLPAGIPAVLFQTFVQVLPDSA--AVTPIALLTREELPDIG---PIKLFVSADVIMSAKL 751
Query: 776 VPSGIMQA--QQFQE-------MFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV 826
+P G +Q +Q Q+ +F V + E E +P Y +S Y
Sbjct: 752 IPGGAVQVSPEQVQKLAAFTLCLFDDVFSKKFEAKDEEIPF----YFAPASMALYE---- 803
Query: 827 IFHKNSVDWK----IIRRCLSSPVFGTPGGSVDRKSLPSHG-PLQLHNGWSS--ESDVEN 879
K ++DW+ ++ SPV VD ++ H + H+G ++E+
Sbjct: 804 -DEKGAIDWQELEHVVLSMHQSPV-------VDPGNIARHYFVVDPHSGARKFIIHEIEH 855
Query: 880 SLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPK--------- 930
+L AT + T ++ S Y+ SD S I Y + +
Sbjct: 856 AL-RATDQ------TPAGVPEHKNSGYQTSDRS------IMQYSCSTRRAQRSSIVFDTE 902
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+ +A L RN L + +E + + Y L LK+ D+ + LLP
Sbjct: 903 QPVYKAWLLSLRRNFLDDDDMETVKGDQ-RCYI-----TLQCLKVSAIPADVARAALLLP 956
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------------EKCQERF- 1037
SI+HRL+ L+ E + +L + P +++ E K E Q++
Sbjct: 957 SILHRLDTALIVTEARDMLGLNLP--LQLAWEAFTKGADDADDDDGELDAEHEHEQQQHG 1014
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ ERLE LGD+FLK A L+ + E E R + N NL A LQ
Sbjct: 1015 GQRNYERLEFLGDSFLKMATTIALYTRNSEATEFEHHVERMLLLCNKNLFNTALDLGLQS 1074
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
YIR FD ++ P + K + T+ Q L KT
Sbjct: 1075 YIRSDRFDRRTWYP---NLPLVRGKSAKATVVQQ---------------------LGDKT 1110
Query: 1155 IADVVEALVGAFI---------DDSGFKAATAFL-----KWIGIQVEFEASQVTNICISS 1200
IADV EA++GA D KA T + K + A V +S
Sbjct: 1111 IADVCEAIIGAAYMSGVQQGGNMDEAVKAVTKMVNNDNHKMTSFSDYYAAFSVPAWHLSP 1170
Query: 1201 KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYL 1259
S + + A++D + ++G++F LL AF H S+ YQ LEFLGDA+LD +
Sbjct: 1171 GS-VSVRATVD--RVAAIIGYRFRSPLLLRSAFTHASYKAEEIPSYQTLEFLGDALLDMV 1227
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY--- 1316
I +L+ P P LT+ + + +NQ + V+ ++ L+ + + +
Sbjct: 1228 IVDHLFRTRPHAGPQALTESKMSVCSNQFLGCLCVELGLHRELLTADAAVPGHVKAFEEK 1287
Query: 1317 VDYMITPSSTREVKE---------GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
V Y+ ++ R PK L D+VE+ +GA+ +D+ ++L+ V
Sbjct: 1288 VAYLREQAAGTGASAATNKAYWTLATRPPKALADVVEALIGAMFVDARYDLSVVANFFQR 1347
Query: 1368 FLDP 1371
F+ P
Sbjct: 1348 FVQP 1351
>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
Length = 1962
Score = 316 bits (809), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 232/696 (33%), Positives = 334/696 (47%), Gaps = 73/696 (10%)
Query: 922 YGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYFDDLPPELCQLKIIGFS 979
YG+ L +QPL++ + + +NLL R + ES + + Y+ LPPELC + + S
Sbjct: 1316 YGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETILDKTYYVFLPPELCVVHPLSGS 1375
Query: 980 KDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSL 1039
G+ LPSIM R+E++L+A++LK+L+S P +L+ALT CQE F
Sbjct: 1376 LVRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSKILEALTAASCQETFCY 1427
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ER E+LGDA+LK+ V R+LFL + EG+LTR R V+N L + A LQ YI+
Sbjct: 1428 ERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQAD 1487
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDLNAEVRCSKG------- 1146
F P ++ A G P + ++T+ S +D D+ + G
Sbjct: 1488 RFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLS 1545
Query: 1147 -HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
+ L KT+ADVVEAL+G + + G AA +KWIGI VE + +V +
Sbjct: 1546 SYRVLSSKTLADVVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPES 1605
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYL 1264
+ S+D LE L +F +GLL++A H S G CYQRLEF+GDAVLD+LIT +L
Sbjct: 1606 VLKSIDFVGLERALKFEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHL 1665
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS 1324
+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+ L + I +V + T S
Sbjct: 1666 FFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTES 1725
Query: 1325 STREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
S + PKVLGD+VES GAI LDSG + WK+ L P++ L +
Sbjct: 1726 SKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM 1785
Query: 1381 NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIAS 1440
+P+REL E C L++ + + G E VFI +++ ++A
Sbjct: 1786 HPVRELQERCQQQAEGLEYKASRSGNTATVE---------VFIDGVQVGVAQNPQKKMAQ 1836
Query: 1441 QQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQ 1500
+ AA K K + + E R+ G V DD K + Q
Sbjct: 1837 KLAARNALAAL---KEKEI------AESKEKRVNGN-----AVENQDDENGNANKKNGNQ 1882
Query: 1501 GGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIV 1560
+ R L ++C W P++ C KE G +H K FTF V V
Sbjct: 1883 TFT-------------------RQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRV 1923
Query: 1561 EIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
ECIGEP K A + AA +L L +
Sbjct: 1924 NTSDRGWTDECIGEPMPSVKKAKDSAAVLLLQLLNK 1959
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 226/481 (46%), Gaps = 43/481 (8%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI +L ++ + IVFV R+V A L + L L RC ++G N
Sbjct: 639 TPKVQSLIKLLLKYQHTSDFRAIVFVERVVAALVLPKVFAELPSLGFIRCASMIGHNNS- 697
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M + M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRA
Sbjct: 698 QEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRA 757
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE---------R 576
R P S+Y +V+ GN ++N E+ + +E ++RT +
Sbjct: 758 RKPGSDYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDTVPGT 817
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
IYKV+++GA +S V L+H YCS+LP D + +P+F + GG C + LP
Sbjct: 818 IYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLP 877
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP + G SSM A++ CL A + LH++GA D LLP + + + E + +
Sbjct: 878 CNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKVDQDDEG 937
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPV-------RLNFYFMQFI-----PDPADR 739
+ G E + V VL+ W S + L Y ++ + DP
Sbjct: 938 EPVPGTARHREFYPEGVADVLKGEWILSGKEICESSKLFHLYMYSVRCVDLGSSKDPFLT 997
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE 799
EF + + L E + +DL++AR L G + + Q LK +
Sbjct: 998 EVSEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLK------K 1051
Query: 800 FNSEFVPLGKDDYCESSSSTF-----YLLLPV-----IFHKNSVDWKIIRRCLSSPVFGT 849
F+ + + D E S++ + YL +PV I ++W+++ + + +
Sbjct: 1052 FHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVSDNTSIEPIKGINWELVEKITKTTAWDN 1111
Query: 850 P 850
P
Sbjct: 1112 P 1112
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 147/254 (57%), Gaps = 12/254 (4%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ K +K + +FL P V L
Sbjct: 242 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSKNRKLLSVFLVPKVPL 301
Query: 118 VQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V QQA+VI F+V +CG + W++E + +VLVM QILL L H I+
Sbjct: 302 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRHSIIR 361
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQAN 235
ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q +
Sbjct: 362 METIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVD 419
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE- 294
I +LE LD+ V +++D ++LE V P V +Y D +++ + E + +
Sbjct: 420 CAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEY-----DKAATMWSLHETIKQM 474
Query: 295 -IKREQYISALSRK 307
+ E+ A SRK
Sbjct: 475 IVAVEEAAQASSRK 488
>gi|367045744|ref|XP_003653252.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
gi|347000514|gb|AEO66916.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
Length = 1591
Score = 315 bits (806), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 394/1451 (27%), Positives = 603/1451 (41%), Gaps = 257/1451 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL ++A +N I L TG GKT IA LL+ EL + + K + FL
Sbjct: 138 RDYQLELFERAKAQNTIAVLDTGSGKTLIAALLLRWTIQNELENRSKGLPKRVAFFLVDK 197
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
VALV QQ V+ ++ + + FCG + S W+K D+ +V+ +IL CL+H
Sbjct: 198 VALVFQQHAVLACNLDYPIEKFCGDMVDEVSSKEFWDKTFDENMAIVLTAEILYQCLHHS 257
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
+I+M+ I LL+FDE HH K NHPYA+I+KDFY D + PRIFGMTASPV
Sbjct: 258 YIRMDQINLLVFDEAHH--TKKNHPYARIIKDFYIEVKDEGQRPRIFGMTASPV------ 309
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
DA++ V A +LE+ + S + V V+ T++ E
Sbjct: 310 ----------------DAQIDPVVAAAELEALLHSQIATVADTA-VLQHTAAK--PEHEF 350
Query: 292 LAEIKRE--QYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
L E +R + + L+R L + K+ D+ LG A +
Sbjct: 351 LVEYERRPPDWETDLNRALKELVGGHRIFKKPFAFTDT---AAAELGPWCADRYWQLFFR 407
Query: 350 GDETMR------NELIE--AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
D ++ EL+ A ++D+ + + V R G++ L
Sbjct: 408 EDNAVKLESRTERELLREFAYHQSMDEHIGKVKQAYQLVNQHRFPRPGLSPHL------- 460
Query: 402 EPFFSKKLLRLIGIL-STFRL-QQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFL 458
S K++ L+ IL F + +CIVFV + A L +LQ + + + L
Sbjct: 461 ---LSSKVILLVRILWDQFNGGDTNRRCIVFVRQRNVATLLVDLLQQPEMKIPGLKPGVL 517
Query: 459 VGVNAGLKSMS------RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
VG S R+ + +I+ KF+ GELN + AT V EEGLDI C ++IR+DL
Sbjct: 518 VGGGRPEASWDNEKVTYRDQVLTII-KFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLN 576
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGN----------QRELDLIKNFSK---EEDRMNR 559
+T+ +IQSRGRAR S Y + + GN ++ D+++ F + E+ ++N
Sbjct: 577 DTLIQYIQSRGRARQAGSVYIHMAEKGNADHSRLLSLNKQGEDVLRKFCEAMPEDRKLNA 636
Query: 560 EIMDRTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
D D F E +R Y V +GA ++ ++ L + + LPH + +
Sbjct: 637 NTFD---MDYFLRKEKDQRQYTVPETGAKLNYKQSMACLATFVASLPHPPEVSLTADYLV 693
Query: 618 FDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDA----CLKAIE----DLH------ 663
GG C + LP ++PI + G S AK A CL I+ D H
Sbjct: 694 LPVPGGFQCEVTLPESSPIRSVTGRVHLSKVVAKCSAAFEMCLLLIKGKYLDQHLRPVFT 753
Query: 664 -KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLV----PAVLRQSWTK 718
+L A+ + L E M + S+ GE + ELH M + PA L + +
Sbjct: 754 KQLPAMRNARLAVSSKKKEQYKMRIKPEIWSHLGEPT--ELHVMALTLADPAALGHASSP 811
Query: 719 ----SQYPV-RLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMT 773
S+ P+ R+ + + F PD + + S +P D L +G + T
Sbjct: 812 LLLLSRQPIPRVAPFALFFGPDRSSAV---------SCVPALGTVKFNDDSLIQGLAAFT 862
Query: 774 KLVPSGIMQAQQFQEMFLKVI-LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS 832
++ F+++F K S+ P KD + + S V +
Sbjct: 863 LMI---------FKDVFSKEYEATASQLPYFLAPTRKDHHFDFGS--------VADPCHI 905
Query: 833 VDWKIIRRCLSSP----VFGTPGGSVDRKSL--PSHGPLQLH-----NGWSSESDVENSL 881
+DW ++ ++ F P K + P G + +G V + +
Sbjct: 906 IDWATVKFVQANEHIVCTFDEPDDFYKDKYVTDPFDGSRKFFLLGRCHGMKPTDPVPDGI 965
Query: 882 VYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFR 941
V H+ W N S + SS G QP++ A+ L
Sbjct: 966 VPPRHRAWRVTCRNHDILNYSLSAWS------------SSRGRMRLREDQPVVEAELLPI 1013
Query: 942 LRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDIGSSLSLLPSIMHRL 996
RNLL +D E DL P+ C L+I D+ + P+I+HR+
Sbjct: 1014 RRNLL-----DDDVGDE------DLEPKPCFLALEPLRISPLPVDVVAMAYNFPAIIHRI 1062
Query: 997 ENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQER------------FSLERL 1042
++ LVA++ +L G ++ ++ L+A T ++ +ER + ERL
Sbjct: 1063 DSNLVALDACKML------GLDIRPDLALEAFTKDSDNTEERDAEQVNFQGGMGNNYERL 1116
Query: 1043 EILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFD 1102
E LGD FLK A +F L E + R V N NL A L+ YIR FD
Sbjct: 1117 EFLGDCFLKMATTISIFTLIPDKAEFDYHVERMLMVCNRNLFNNALNVKLEEYIRSMAFD 1176
Query: 1103 PCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
++ G + K + I Q H L KTIADV EAL
Sbjct: 1177 RRSWYPEGL----VLRKGKRKDITRQ-------------------HMLADKTIADVCEAL 1213
Query: 1163 VGAFI------DDSGF----KAATAFLKWIG-IQVEFEASQVTNICISSKSFLPLSASLD 1211
+GA D + F +A TA +K + + ++ S LD
Sbjct: 1214 IGAAYLTAQEKDPNNFDLAVQAVTALVKDKNHTMTSYRDYYAAYVKPDWQTAPANSTQLD 1273
Query: 1212 MAT-LEILLGHQFLHRGLLLQAFVHPSF----NRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
MA +G+ F H LL AF HP++ RL YQRLEFLGDA+LD +L+
Sbjct: 1274 MAARFHARMGYAFKHPRLLRSAFQHPTYPSMYERLPS-YQRLEFLGDALLDMASVEFLFH 1332
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITP-SS 1325
+P P LT+ + +V+NQ +AV+ F++ L + S L I YV M S
Sbjct: 1333 RFPGADPQWLTEHKMAMVSNQFLGCLAVELGFHRALTYCSPALQREIGEYVAEMEEALQS 1392
Query: 1326 TRE--VKEG--------------PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
RE + G R PK L D VE+ +GA+ +DS ++ V +
Sbjct: 1393 AREDAARHGRREDEYSRDYWVDCSRPPKCLPDTVEAYVGAVFVDSEYDFGRVRDFFARHV 1452
Query: 1370 DPILKFSNLQL 1380
P F +++L
Sbjct: 1453 RPF--FEDMRL 1461
>gi|413933739|gb|AFW68290.1| hypothetical protein ZEAMMB73_539070 [Zea mays]
Length = 707
Score = 314 bits (805), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 229/686 (33%), Positives = 345/686 (50%), Gaps = 64/686 (9%)
Query: 780 IMQAQQFQEMFLKVIL--DRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKI 837
++ A++FQ L +++ D SE ++ L + +S YLLLPV+ K +DW+
Sbjct: 58 VIAARRFQTTILSLLISNDLSEVSNYIKNLLE---MPASPGAVYLLLPVVSGK--IDWRS 112
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
I+ S T G +Q +G + NS+V H FY V +
Sbjct: 113 IKFSASEMPEATNMDMRHCYPCKDTGIVQTKDGTFCSCMLRNSIVCTPHNGMFYAVCGFL 172
Query: 898 FEKNGYSPYKDSDSS--SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH--NRKLED 953
+ N S SD S S+ + Y + L+ Q LL A+ L +RN LH N K E
Sbjct: 173 -DLNANSLLHRSDGSFLSYKTYFKERYNLDLRCEDQALLEARKLVEVRNFLHKCNYKKEK 231
Query: 954 SESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
S + +LPPELC + + S S + +PSIM+R++ +L+++ LK L S
Sbjct: 232 ERSGK---SVVELPPELCIVVMSPMSAITLRSFTFIPSIMYRIQCMLLSMNLKMQLGPSM 288
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
+ ++ A +L+ALTT+ CQE FS E LE LGD+FLKY +H F+ + EG LT+
Sbjct: 289 QQ-FDIPALKILEALTTKNCQEEFSQESLETLGDSFLKYITTQHFFVKYKHQHEGMLTKM 347
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRA 1133
+ N ++N+ L +LA NNL YIR + F+P + G YD
Sbjct: 348 KKNVISNAALCQLACSNNLVGYIRSEAFNPKTWIVPG----------------VGYD--- 388
Query: 1134 PDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQV 1193
C + L K IAD VEAL+GA++ +G +AA FLK +G+ +EF +
Sbjct: 389 --------ICDRSLRKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGMDIEFHKMPI 440
Query: 1194 TN-ICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEF 1250
I I ++ F +++ +LE+LL + F LL++A H S+ G CYQRLEF
Sbjct: 441 ERVITIKAEEF------INVKSLELLLDYSFNDPSLLMEALTHGSYQIAGTTPCYQRLEF 494
Query: 1251 LGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLS 1310
LGDAVLD++ T Y Y YP+ P LTDLRS VNN +A+ AV +K ++ S+ L
Sbjct: 495 LGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHVLHSSSALH 554
Query: 1311 ETINNYVD----YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
+ + +Y+D PS E G PKVLGD+VES GAI +D+ + VW+ M
Sbjct: 555 KRMADYLDKFEQSFSGPSHGWEA--GISLPKVLGDVVESIAGAIYIDAKHDKGVVWRSMK 612
Query: 1367 SFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG--KFLAEAKVTGKDKDVFIS 1424
L+P++ LQ +P++EL E C+S L++ + G +AE + G
Sbjct: 613 RILEPLVTPDTLQNDPVKELQEFCDSKGYTLEYTVTRDNGVSSVVAEVRTEGTT----YK 668
Query: 1425 ACATNLSRKEAIRIASQQLFSKLKAA 1450
A T S+ +A ++A+ + LKAA
Sbjct: 669 ATRTGFSKLDAKKLAASSVLRDLKAA 694
>gi|353227266|emb|CCA77779.1| hypothetical protein PIIN_03414 [Piriformospora indica DSM 11827]
Length = 1418
Score = 313 bits (803), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 360/1381 (26%), Positives = 594/1381 (43%), Gaps = 172/1381 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQ EL + A ++N I+ TG GKT I+ + + +FL P V LV
Sbjct: 12 ARLYQEELARHARDQNAIIAADTGTGKTLISAM---------------VALFLVPKVPLV 56
Query: 119 QQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ +EE+ FKVR + G W KE ++LVM PQI L L H +
Sbjct: 57 DQQRAFLEENTPFKVRGYSGAMGVDYWDKTAWTKEFMGVDILVMTPQIFLNILRHAHWSI 116
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYK--PDIMKVPRIFGMTASPVVGKGASAQAN 235
+ +++++FDE H+ + KS P A IM + Y P+ + P+I G+TASP+ A
Sbjct: 117 DRVSIIVFDEIHNCKGKS--PEALIMMEHYHTIPNGLPRPKILGLTASPIFNPKKPVAA- 173
Query: 236 LPKSINSLENLLDAKVYSVE-DAEDL--ESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+ +E L D KVY V+ EDL +F + ++ Y P I V+ +L
Sbjct: 174 ----LAEIEKLTDCKVYVVKAHTEDLAKHTFQAEDMIVDYPPTPSIF-PRYPVVSLWVEL 228
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI-LLSGD 351
+ + K D S L + + LG GA Y+ + +
Sbjct: 229 TMTRLLPDFTLFPGKPKDTMSGNRGGPWFTTLENRYNTTRKALGPFGADLFVYVHVFTAL 288
Query: 352 ETMRNELIEAEGNTID-DSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
ET++ +L+ + D D+ R S +++ + + + L+ E+L E + S KLL
Sbjct: 289 ETIKKDLLPIFTDRPDPDAEKR--SHLDDLYEILAKHEHRL--LTSHELLSEEWLSPKLL 344
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNA------- 463
RL +L + + I+F A LS + L + R +VG
Sbjct: 345 RLRELLLK-QDSTSFRGIIFTYERQIATTLSLMFPRLG-IPGVRAGPIVGHGLHACSVPE 402
Query: 464 --GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
G+K M ++ FR G LNL++AT V EEGLD C V RFD P T+ +IQS
Sbjct: 403 ILGMKGMPFKTQDKVVADFRMGGLNLIIATSVAEEGLDFPLCSFVCRFDPPRTLPQYIQS 462
Query: 522 RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDR--------MNREIMDRTSSDAFTCS 573
RGRARM S + +++ G +E + ++ E R M+RE D D T
Sbjct: 463 RGRARMAGSTFVIMLEEGPSKERETVEALQVGEIRAKTMYGSNMDRED-DEVELDENTPK 521
Query: 574 EERI---YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIIL 630
++ + + V+ +GA ++ +SLL+ CS +P D+ Y D + + +
Sbjct: 522 DDGLEGRFIVEKTGASLTPAGSISLLNNLCSLIPRDDHTRSLQPVYETDPVTFRTTNRLP 581
Query: 631 PANAPIHQ----IVGTPQ-SSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDE 683
PA PI + V P + +AAK++A KA+ L++LG +D+LLP +E T
Sbjct: 582 PA-LPIPREDLLFVSDPFCRTKKAAKRNAAFKAVLRLYELGVFDDFLLPIRREKGDT--- 637
Query: 684 PMLFSSDSDSYEGEGSRG--ELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY 741
+ D D G + ++LV W +S P+ ++ + +DR
Sbjct: 638 ----AEDIDGKPPVDVTGIVPMMDVLVHDPWGDMWRESS-PIYVHQLAL------SDRKG 686
Query: 742 REFGLFVKSLLP--GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE 799
R + L+P G LK ++H+ + VM +L P Q + F+K+ + +
Sbjct: 687 RMGLVCGNRLMPFDGYMTALKQEVHVRLEKGVMLELEPEVRQQQLALMDSFMKIGIKAAI 746
Query: 800 FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSL 859
+ S+ F L+P + DW I C+ +P S D +++
Sbjct: 747 TRRGLT---------NRSAVF--LVP-LDSSGQPDWDEIEHCVYTP------SSTDWRAV 788
Query: 860 PSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLI 919
S +SDV SL+ ++ V + + + ++ +H+ +
Sbjct: 789 ----------DLSGKSDVFVSLLSQGG------ISKFVACRPDLNVTECIEADAHLAKYV 832
Query: 920 SS---YGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKII 976
+S +G + +L+ +P+F + + R + L + +P +CQ +
Sbjct: 833 ASLAKFGRTISE-DDTVLQCRPIFSITS-TEFRDPARQKPGILSDTDVFIPQSVCQW--L 888
Query: 977 GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQER 1036
+D S LP + H L ++ A L L E+ + ++ALT +
Sbjct: 889 NLDEDRLRWFSSLPPLFHLLSSVYRARLLHSRLGV-----PELDLDRTIEALTIPQACAS 943
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
F+ +RLE LGD+FLK A H+ EG+LT R N+V N LL NL ++
Sbjct: 944 FNNQRLETLGDSFLKVATTIHVLNKFPHKHEGQLTSLRQNSVCNRYLLGRGHAQNLVSFM 1003
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
+P ++ RI T+ + R + ++++
Sbjct: 1004 NIEPNSQSRW--------RITPVSTKYINSRSFVERV----------------IPRRSVQ 1039
Query: 1157 DVVEALVG-AFI---DDSGFKAATAFLKWIGIQVEF-EASQVTNICISSKSFLPLSASLD 1211
D +EAL+G A++ D +G + T G V + E + SS S P
Sbjct: 1040 DCMEALLGVAWLSGGDKAGLRVGTRLGLCFGGTVPWAERYPKVELAFSSSSPFP------ 1093
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
LE LG+ F + LL++A HPSF YQRLEFLGDAVLD + + + +YP
Sbjct: 1094 --PLEENLGYTFKDKSLLVEALTHPSFVSGSASYQRLEFLGDAVLDLVTVEHFFHLYPNA 1151
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREVK 1330
G+LT R+ V N + + + +K + D+ L N + T+ +
Sbjct: 1152 TSGKLTRARARCVCNSTLSALGTKKLEIHKAMFCDAISLVAAANKTARMFNSMDFTQVID 1211
Query: 1331 EGPR--CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIREL 1386
R PK LGD+VE+ +GA+ +DSG+N N V +++ +L + ++ L+P E
Sbjct: 1212 NIWRLDAPKALGDMVEALIGAVFVDSGWNYNIVKDVVIRLFKEVLDYIHPDMPLDPTSEF 1271
Query: 1387 L 1387
+
Sbjct: 1272 M 1272
>gi|379987680|gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
Length = 596
Score = 313 bits (802), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 315/603 (52%), Gaps = 52/603 (8%)
Query: 1032 KCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
+C E FS+ERLE+LGD+ LKYAV HLFL + EG+L+ +RS AV+NS L K+ +
Sbjct: 3 RCNESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSDQRSWAVSNSTLHKVGTSRH 62
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICS-----KETERTIHSQYDGRAPDDLNAEVRCSKG 1146
LQ YIRD FDP ++ A G+ R+C + +E + ++ P + + C +G
Sbjct: 63 LQGYIRDGAFDPRRWTAPGQLSLRLCPCDHGVETSEVPLDKKFLTEDPKVVVGK-HCDRG 121
Query: 1147 HHWLHKKT-IADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
H W+ KT I+D VEAL+GA+ GF AA +KW+G++ E E S V + ++ +
Sbjct: 122 HRWMGSKTIISDCVEALIGAYYVGGGFIAALKLMKWLGVEAELEPSLVEDAIKTAFLYSY 181
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSY 1263
+ D+ LE+ L ++F +GLLL+A H + + YQRLEFLGD+VLD LIT Y
Sbjct: 182 TPKAKDIEDLELKLSYKFSVKGLLLEAITHATVLEVDVSYNYQRLEFLGDSVLDILITWY 241
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITP 1323
LY + + PG+LTDLRS VNN FA AV + + L S L I+ +V +
Sbjct: 242 LYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHHSGYLESEISAFVKLVSDS 301
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
S +G + PKVLGDLVES GAIL+D+ NL+ VWKI+ L PI+ L+L P+
Sbjct: 302 CSL----QGNKAPKVLGDLVESIAGAILVDTKLNLDEVWKIVKPLLSPIVTPDKLELPPL 357
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
REL+ELC+S L+ + KG AE ++ KD+ + C +RK A A+ +L
Sbjct: 358 RELIELCDSLGYFLKDHCMVKGDTVHAELRLQLKDELLVAEGCGQ--TRKNAKGQAALKL 415
Query: 1444 FSKLKAAGYVPKTKSLESILKSSPKSEARLIGYD----ETPINVVAA------DDNVFEK 1493
L+ G K K E+ L P S +G D N A +
Sbjct: 416 LKDLEHKGISSKKKKQETSLVDVPYS----LGTDGDICSQANNTCPAMAPCKKQKTILSN 471
Query: 1494 LKISEPQGGSSCD-------IGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKE- 1545
L+ ++ Q S+C+ IG ++ GG R LYELC W P+ + +
Sbjct: 472 LETAKAQPSSACNSNKDIQAIGPINMKKGG-----PRQSLYELCKKLQWPMPSLESTERK 526
Query: 1546 --------EGLSHLKLF-TFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLE 1595
EG K++ TF + + P+ +IE G+ +A KK + + AA ML+ LE
Sbjct: 527 SKSLTECGEGSDKRKVYNTFASQISLTIPDYGLIELTGDERADKKSSQDSAALLMLYELE 586
Query: 1596 REG 1598
R G
Sbjct: 587 RRG 589
>gi|403179645|ref|XP_003337958.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165150|gb|EFP93539.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 313 bits (801), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 379/1454 (26%), Positives = 622/1454 (42%), Gaps = 205/1454 (14%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS--ICIFLAPT 114
+I R YQ EL ++A + NII+ TG GKT +AV LI A + K+ I FL PT
Sbjct: 19 KIPRLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAVKTKAKNKNHQIQAFLVPT 78
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L QQA+ I++ +++ + G L + W E+++ +VLV QI +
Sbjct: 79 RPLAHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNEVDVLVSTAQIFYDLISKG 138
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVPRIFGMTASPVVGKG 229
+ K+E ++LLIFDE HH + NH Y +IM+ Y K +++P+I G+TASP+
Sbjct: 139 YWKLEDVSLLIFDEAHHC--RKNHVYNQIMRSHYHRLAKDSTVRLPKILGLTASPIWNFK 196
Query: 230 ASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+A I SL++ L A++Y V+ ED+ P +V + P +
Sbjct: 197 DLEKAE--SDIKSLQSALAAQIYEVKKHTEDVCRHNFKPNEQVVYFEPAPD--------- 245
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
+QL +Q LS LH + + ++ + + +L V L + +
Sbjct: 246 FQQLPHPPWDQINKLLS--LHASPKMIAAVESVSLDLGTYAY---SLAVLDWLKSLLTIG 300
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
++ M L++ R S EV L I+ + E S K
Sbjct: 301 GSNQLMSGRLVDPNYQE------RIQSLIKEV-----------EKLVDIDDIPENQLSSK 343
Query: 409 LLRLIGILSTFRLQ---QHMKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVNAG 464
++ L IL ++ + + CIVFV R A+ L +L+ N++ R L G +G
Sbjct: 344 VIALYKILVNYKEKDDHNNFLCIVFVERRQHAQLLPILLERNVQLKDFLRPAALTGHGSG 403
Query: 465 -------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
+K SR +++ KFR+GE NL +AT V EEGLD ++C +VIRFDL T
Sbjct: 404 NENDLIGIKMDSRTQNRTV-AKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKG 462
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI 577
+IQSRGRAR +S+Y ++ +G + FS +E+++ + DR + EE
Sbjct: 463 YIQSRGRARARESDYIVMLPTGTANKY---LAFSGKEEQLKAALYDRPQDELIEDGEEES 519
Query: 578 YK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIIL 630
D + ++ SLL+ C +P DEF Y +LG C + L
Sbjct: 520 TPQLICQLADGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPEYEMMELGERFKCRVTL 579
Query: 631 PANAPI----HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ-EDNATEDEPM 685
P A + G + AK+ A +A + L +LG LN++ LPQ ED A +
Sbjct: 580 PPMAALPPSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLPQREDKAAQ---- 635
Query: 686 LFSSDSDSYEGEGSR-GELHEMLVPAVLRQSWTKSQ-YPVRLNFYFMQFIPDPADRIYRE 743
D+D E E ++ + E ++ + T S+ + +L+F PD + +
Sbjct: 636 --VRDADGREIETTQLADKVEAIISNIYGDFRTSSEVWLHKLSF------PDDSPAGFST 687
Query: 744 FGLFVKSLLPGEAEHLKV--DLHL------ARGRSVMTKL----------VPSGIMQAQQ 785
GL A HL + DL L +R SV K P + + ++
Sbjct: 688 MGLLC-------ARHLTIPDDLQLFDHDPVSRPLSVKIKHSKKVEWEQDDAPFNLQRLER 740
Query: 786 FQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSP 845
F + ++V ++R + + ++L+ P++ +DW ++ +
Sbjct: 741 FTLLVMQVAVNRKPYEGKL---------------YFLVAPLLNDAIEIDWNLVDTPMIPL 785
Query: 846 VFGTPGGSVDRKSLPSHGP-LQLHNGWSSESDV----ENSLVYATHKKWFYLVTNIVFEK 900
+PS P ++ + S D+ S V A + F
Sbjct: 786 SEAADSSRYQCTIVPSRRPRFRIFDTCESAGDLCAASPPSRVPACPSMQHFCKKIAKFHN 845
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE 960
G+ YK + Y + +H K + + F++ N L S S
Sbjct: 846 LGHF-YK------------TCYDLEDEHLKGDFVYLQTTFQVYN-----NLLQSVSTLAH 887
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
Y LP +LCQ I + I S LPS+ L + + A L + FP
Sbjct: 888 PYRTLLPLKLCQGTHI--PRTIWKVFSYLPSLTRLLHDSIQATAL--FMRLDFPMTLLPR 943
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
++ALT + + LE +GDAFLK A H++L H EG+++ RS +V+N
Sbjct: 944 G---IQALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVDN 1000
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
L + A + NL I Q F R R +TE DG+ E
Sbjct: 1001 DYLRRKAIQANLPSSILGQRF----------RTDRFRDAQTE-------DGK-------E 1036
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGA-FID---DSGFKAATAFLKWIGIQVEFEASQVTNI 1196
+ + ++ ++DVVEAL+GA F+ + G K TA G + + NI
Sbjct: 1037 LPNGNFSRNVPRRVLSDVVEALLGAGFLTGGIELGLKIGTALDLCFGGTTPWN-ERTLNI 1095
Query: 1197 CISSKSFLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGD 1253
+ L++S L LE +G+ F + LL+QA H S N + CY+R E+LGD
Sbjct: 1096 AFEGTAHDKLASSILLKCQALEEKIGYVFKEKLLLVQALTHRSANSFMTNCYEREEWLGD 1155
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSET 1312
AV+D I + Y + +LT R+ LV+N + +A+ + +K ++ S +
Sbjct: 1156 AVVDMWIVQHAYKRFDNATAEELTLARAKLVSNGSLGFLAIKKLGLHKVIMHKSESFEQA 1215
Query: 1313 INNYVDYMITPSSTRE---------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWK 1363
+ + +S E V P PK+L D++E+ +GA+ +DS F+L TV++
Sbjct: 1216 CVEAIKAIEPFTSIEEFFSNLENLFVVFDP--PKILNDVLEAIVGAVFIDSRFDLPTVYR 1273
Query: 1364 IMLS-FLDPILKFSNL-QLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD- 1420
+ F D S + +P+ +L L + Y Q L++ + E G+DKD
Sbjct: 1274 TIDKIFEDVTPGLSRIVARDPLSTMLRLRDQY----QCAELRRVSTTIKEPNPEGEDKDP 1329
Query: 1421 VFISACATNLSRKE 1434
+ + C L +E
Sbjct: 1330 ISVRVCRIELHGQE 1343
>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1965
Score = 312 bits (799), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 235/698 (33%), Positives = 335/698 (47%), Gaps = 94/698 (13%)
Query: 918 LISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE-------YFDDLPPEL 970
L+ YG+ L + +QPL+R + + +NLL R E SE HE E Y+ LPPEL
Sbjct: 1321 LLIRYGVDLAYKQQPLIRGRGVSYCKNLLSPR-FEHSEGHEDETEETHDKTYYVFLPPEL 1379
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT 1030
C + + S G+ LPSIM R+E++L+A++LK++++ +P V A +L+ALT
Sbjct: 1380 CLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKNMIN--YP----VQASKILEALTA 1431
Query: 1031 EKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN 1090
CQE F ER E+LGDA+LK+ V R LFL H EG+LTR R V+N L + A
Sbjct: 1432 ASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSK 1491
Query: 1091 NLQVYIRDQPFDPCQFFALG--------RRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
LQ YI F P ++ A G + + ER+I D+ E+
Sbjct: 1492 GLQSYILADRFAPSRWAAPGVLPVFDEDTKDEESSLFDQERSIFKAERMDNTDEFEDEME 1551
Query: 1143 ------CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNI 1196
S + L KT+ADVVEAL+G + + G AA +KWIGI +E + ++
Sbjct: 1552 DGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEME-- 1609
Query: 1197 CISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGD 1253
CI+ S +P S S+D LE L +F +GLL+++ H S G CYQRLEF+GD
Sbjct: 1610 CITKPSNVPDSILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGD 1669
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA V V + + L S+ L + I
Sbjct: 1670 AVLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQI 1729
Query: 1314 NNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
++V D + P + PKVLGD++ES GAI LDSG N VWK+ L
Sbjct: 1730 KDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPLL 1789
Query: 1370 DPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATN 1429
P++ L ++P+REL E C L++ + + G E + G V + A A N
Sbjct: 1790 HPMVTPETLPMHPVRELQERCQQQAEGLEYRASRAGNLATVEVFIDG----VQVGA-AQN 1844
Query: 1430 LSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDN 1489
+K A ++A++ + LK
Sbjct: 1845 PQKKMAQKLAARNALAALKEK--------------------------------------- 1865
Query: 1490 VFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLS 1549
E+ KI E G+ + T R L ++C W P + C E G +
Sbjct: 1866 --EESKIQEKNDEKETKNGNQTFT---------RQTLNDICLRRNWPMPFYRCVSEGGPA 1914
Query: 1550 HLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAA 1587
H K FTF V V EC+GE K A + AA
Sbjct: 1915 HAKRFTFAVRVNTTDKGWTDECVGEAMPSVKKAKDSAA 1952
Score = 197 bits (500), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 171/325 (52%), Gaps = 15/325 (4%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + I+FV R+V+A L + L L+ +C L+G N
Sbjct: 622 TPKVQALIKILLKYQNTDDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNS- 680
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M + M + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 681 QEMRTHQMHDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 740
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSE---------ER 576
R P S+Y +V+ GN +KN E+ + RE ++RT S E
Sbjct: 741 RKPGSDYILMVERGNLSHEAFLKNARNSEETLRREAIERTDLSHLKDSSRLISVDTHPET 800
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
+Y+V S+GA +S V L+H YCS+LP D + +P+F ++ GG C + LP
Sbjct: 801 MYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMEKHENSGGPTEYSCRLQLP 860
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
NAP + G SS+ A++ CL A LH++GA D LLP + + E E + +
Sbjct: 861 CNAPFENLEGPICSSIRLAQQAVCLAACRKLHEMGAFTDMLLPDKGSGEEKEKAEQNDEG 920
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSW 716
D+ G E + V +L+ W
Sbjct: 921 DALPGTARHREFYPEGVADILKGEW 945
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 147/249 (59%), Gaps = 14/249 (5%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI---YELAHLIRKPQKSICIFL 111
P++ AR+YQL++ ++A N I +L TG GKT IAVLLI +E HL K K + +FL
Sbjct: 216 PEEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSIHETLHLQNK--KMLAVFL 273
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
P V LV QQA+VI E G++V +CG + W++E D VLVM QILL L
Sbjct: 274 VPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNIL 333
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKG 229
H IKME I LLI DECHHA K HPY+ +M +FY K P +FGMTASPV KG
Sbjct: 334 RHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKG 391
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
S+Q + I +LE+ LD+ V +++D ++LE V P V +Y D ++S
Sbjct: 392 VSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVKY-----DKAASLCYLH 446
Query: 290 EQLAEIKRE 298
EQ+ +++ E
Sbjct: 447 EQIKQMETE 455
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial [Medicago truncatula]
Length = 1939
Score = 312 bits (799), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 235/700 (33%), Positives = 341/700 (48%), Gaps = 92/700 (13%)
Query: 918 LISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE-------YFDDLPPEL 970
L+ YG+ L + +QPL+R + + +NLL R E SE HE E Y+ LPPEL
Sbjct: 1289 LLIRYGVDLAYKQQPLIRGRGVSYCKNLLSPR-FEHSEGHEDETEETHDKTYYVFLPPEL 1347
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFP-EGAEVSAEM-LLKAL 1028
C + + S G+ LPSIM R+E++L+A++LK++++ +P + ++VS+++ +L+AL
Sbjct: 1348 CLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKNMIN--YPVQASKVSSQLKILEAL 1403
Query: 1029 TTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAA 1088
T CQE F ER E+LGDA+LK+ V R LFL H EG+LTR R V+N L + A
Sbjct: 1404 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYAL 1463
Query: 1089 RNNLQVYIRDQPFDPCQFFALG--------RRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
LQ YI F P ++ A G + + ER+I D+ E
Sbjct: 1464 SKGLQSYILADRFAPSRWAAPGVLPVFDEDTKDEESSLFDQERSIFKAERMDNTDEFEDE 1523
Query: 1141 VR------CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT 1194
+ S + L KT+ADVVEAL+G + + G AA +KWIGI +E + ++
Sbjct: 1524 MEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEME 1583
Query: 1195 NICISSKSFLPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFL 1251
CI+ S +P S S+D LE L +F +GLL+++ H S G CYQRLEF+
Sbjct: 1584 --CITKPSNVPDSILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFV 1641
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA V V + + L S+ L +
Sbjct: 1642 GDAVLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEK 1701
Query: 1312 TINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
I ++V D + P + PKVLGD++ES GAI LDSG N VWK+
Sbjct: 1702 QIKDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQP 1761
Query: 1368 FLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACA 1427
L P++ L ++P+REL E C L++ + + G E + G V + A A
Sbjct: 1762 LLHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRAGNLATVEVFIDG----VQVGA-A 1816
Query: 1428 TNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAAD 1487
N +K A ++A++ + LK
Sbjct: 1817 QNPQKKMAQKLAARNALAALKEK------------------------------------- 1839
Query: 1488 DNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEG 1547
E+ KI E G+ + T R L ++C W P + C E G
Sbjct: 1840 ----EESKIQEKNDEKETKNGNQTFT---------RQTLNDICLRRNWPMPFYRCVSEGG 1886
Query: 1548 LSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAA 1587
+H K FTF V V EC+GE K A + AA
Sbjct: 1887 PAHAKRFTFAVRVNTTDKGWTDECVGEAMPSVKKAKDSAA 1926
Score = 199 bits (505), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 227/482 (47%), Gaps = 48/482 (9%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + I+FV R+V+A L + L L+ +C L+G N
Sbjct: 622 TPKVQALIKILLKYQNTDDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNS- 680
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M + M + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 681 QEMRTHQMHDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 740
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSE---------ER 576
R P S+Y +V+ GN +KN E+ + RE ++RT S E
Sbjct: 741 RKPGSDYILMVERGNLSHEAFLKNARNSEETLRREAIERTDLSHLKDSSRLISVDTHPET 800
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
+Y+V S+GA +S V L+H YCS+LP D + +P+F ++ GG C + LP
Sbjct: 801 MYQVKSTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFIMEKHENSGGPTEYSCRLQLP 860
Query: 632 ANAPIHQIVGTPQSSMEAAKK-DACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSD 690
NAP + G SS+ A++ AC K LH++GA D LLP + + E E + +
Sbjct: 861 CNAPFENLEGPICSSIRLAQQASACRK----LHEMGAFTDMLLPDKGSGEEKEKAEQNDE 916
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPV----RLNFYFMQFI--------PDPAD 738
D+ G E + V +L+ W S +L +M I DP
Sbjct: 917 GDALPGTARHREFYPEGVADILKGEWILSGKDACNNSKLLHLYMYTIKCENVGHSKDPFL 976
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRS 798
+F + + L E + +DL +AR + LV + + Q LK
Sbjct: 977 TQVSDFAVLFGTELDAEVLSMSMDLFIARTVTTKASLVFRESIDITESQLTSLK------ 1030
Query: 799 EFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHK-----NSVDWKIIRRCLSSPVFG 848
F+ + + D E S++ + YL +P++ K N +DW ++ + + +
Sbjct: 1031 SFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSSDPMNQIDWHLVETIIGADAWK 1090
Query: 849 TP 850
P
Sbjct: 1091 NP 1092
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 147/249 (59%), Gaps = 14/249 (5%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI---YELAHLIRKPQKSICIFL 111
P++ AR+YQL++ ++A N I +L TG GKT IAVLLI +E HL K K + +FL
Sbjct: 216 PEEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSIHETLHLQNK--KMLAVFL 273
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
P V LV QQA+VI E G++V +CG + W++E D VLVM QILL L
Sbjct: 274 VPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNIL 333
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKG 229
H IKME I LLI DECHHA K HPY+ +M +FY K P +FGMTASPV KG
Sbjct: 334 RHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKG 391
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
S+Q + I +LE+ LD+ V +++D ++LE V P V +Y D ++S
Sbjct: 392 VSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVKY-----DKAASLCYLH 446
Query: 290 EQLAEIKRE 298
EQ+ +++ E
Sbjct: 447 EQIKQMETE 455
>gi|403171941|ref|XP_003331118.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169641|gb|EFP86699.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 311 bits (798), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 374/1452 (25%), Positives = 617/1452 (42%), Gaps = 201/1452 (13%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS--ICIFLAPT 114
+I R YQ EL ++A + NII+ TG GKT +AV LI A + K+ I FL PT
Sbjct: 19 KIPRLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAVKTKANNKNHQIQAFLVPT 78
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L QQA+ I++ +++ + G L + W E+++ +VLV QI +
Sbjct: 79 RPLAHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNEVDVLVSTAQIFYDLISKG 138
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVPRIFGMTASPVVGKG 229
+ K+E ++LLIFDE HH + NH Y +IM+ Y K +++P+I G+TASP+
Sbjct: 139 YWKLEDVSLLIFDEAHHC--RKNHVYNQIMRSHYHRLAKDSTVRLPKILGLTASPIWNFK 196
Query: 230 ASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+A I +L++ L A++Y V+ ED+ P +V + P +
Sbjct: 197 DLEKAE--SDIKNLQSALAAQIYEVKKHTEDVCRHNFKPNEQVVYFEPAPD--------- 245
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
+QL+ +Q LS LH + + ++ + + +L V L + +
Sbjct: 246 FQQLSHPPWDQINKLLS--LHASPKMIAAIQSVSLDLGTYAY---SLAVLDWLKSLLTIG 300
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
++ M L++ R S EV L I+ + E S K
Sbjct: 301 GSNQLMSGRLVDPNYQE------RIQSLIKEV-----------EKLVDIDDIPENQLSSK 343
Query: 409 LLRLIGILSTFRLQ---QHMKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVNAG 464
++ L IL ++ + + CIVFV R A+ L +L+ N++ R L G +G
Sbjct: 344 VIALYKILVNYKEKDDHNNFLCIVFVERRQHAQLLPILLERNVQLKDFLRPAALTGHGSG 403
Query: 465 LKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
++ M + KFR+GE NL +AT V EEGLD ++C +VIRFDL T +
Sbjct: 404 NENDLIGIKMDSKTQNRTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGY 463
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY 578
IQSRGRAR +S+Y ++ +G + FS +E+++ + DR + EE
Sbjct: 464 IQSRGRARARESDYIVMLPTGTANKY---LAFSGKEEQLKAALYDRPQDELIEDGEEEST 520
Query: 579 K------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILP 631
D + ++ SLL+ C +P DEF Y +LG C + LP
Sbjct: 521 PQLICQLADGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPEYEMMELGERFKCRVTLP 580
Query: 632 ANAPI----HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLF 687
A + G + AK+ A +A + L +LG LN++ LPQ ++
Sbjct: 581 PMAALPPSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLPQREDKVAQ----- 635
Query: 688 SSDSDSYEGEGSR-GELHEMLVPAVLRQSWTKSQ-YPVRLNFYFMQFIPDPADRIYREFG 745
D+D E E ++ + E ++ V T S+ + +L+F PD + G
Sbjct: 636 VRDADGREIETTQLADKVEAIISNVYGDFRTSSEVWLHKLSF------PDDTPAGFSTMG 689
Query: 746 LFVKSLLPGEAEHLKV--DLHL------ARGRSVMTK----------LVPSGIMQAQQFQ 787
L A HL + DL L +R SV K P + + ++F
Sbjct: 690 LLC-------ARHLTIPDDLQLFDHDPVSRPLSVKIKHSKKVEWEKDAAPFNLQRLERFT 742
Query: 788 EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVF 847
+ ++V ++R + + ++L+ P++ +DW ++ +
Sbjct: 743 LLVMQVAVNRKPYEGKL---------------YFLVAPLLNDAIEIDWNLVDTPMIPLSE 787
Query: 848 GTPGGSVDRKSLPSHGP-LQLHNGWSSESDV----ENSLVYATHKKWFYLVTNIVFEKNG 902
+PS P ++ + S D+ S V A + F G
Sbjct: 788 AADSSRYQCTIVPSRRPRFRIFDTCESAGDLCAASPPSRVPACPSMQHFCKKIAKFHNLG 847
Query: 903 YSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEY 962
+ YK + Y + +H K + + F++ N L SES Y
Sbjct: 848 HF-YK------------TCYDLEDEHLKGGFVYLQTTFQVYN-----NLLQSESTLAHPY 889
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
LP +LCQ I + I S LPS+ L + + A L + FP
Sbjct: 890 RTLLPLKLCQGTHI--PRTIWKVFSYLPSLTRLLHDSIQATAL--FMRLDFPMTLLPRG- 944
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++ALT + + LE +GDAFLK A H++L H EG+++ RS +V+N
Sbjct: 945 --IQALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVDNDY 1002
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L + A + NL I Q F R R +TE DG+ E+
Sbjct: 1003 LRRKAIQANLPSSILGQRF----------RTDRFRDAQTE-------DGK-------ELP 1038
Query: 1143 CSKGHHWLHKKTIADVVEALVGA-FID---DSGFKAATAFLKWIGIQVEFEASQVTNICI 1198
+ ++ ++DVVEAL+GA F+ + G K TA G + + NI
Sbjct: 1039 NGNFSRNVPRRVLSDVVEALLGAGFLTGGIELGLKIGTALDLCFGGTTPWN-ERTLNIAF 1097
Query: 1199 SSKSFLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAV 1255
+ L++ L LE +G+ F + LL+QA H S N + CY+R E+LGDAV
Sbjct: 1098 EGTAHDKLASPILLKCQALEEKIGYVFKEKLLLVQALTHRSANSFMTNCYEREEWLGDAV 1157
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETIN 1314
+D I + Y + +LT R+ LV+N + +A+ + +K ++ S +
Sbjct: 1158 VDMWIVQHAYKRFDNATAEELTLARAKLVSNGSLGFLAIKKLGLHKMIMHKSESFEQACV 1217
Query: 1315 NYVDYMITPSSTRE---------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
+ + +S E V P PK+L D++E+ +GA+ +DS F+L TV++ +
Sbjct: 1218 EAIKAIEPFTSIEEFFSNLENLFVVFDP--PKILNDVLEAIVGAVFIDSRFDLPTVYRTI 1275
Query: 1366 LS-FLDPILKFSNL-QLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD-VF 1422
F D S + +P+ +L L + Y Q L++ + E G+DKD +
Sbjct: 1276 DKIFEDVTPGLSRIVARDPLSTMLRLRDQY----QCAELRRVSTTIKEPNPEGEDKDPIS 1331
Query: 1423 ISACATNLSRKE 1434
+ C L +E
Sbjct: 1332 VKVCRIELHGQE 1343
>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
Length = 1690
Score = 309 bits (791), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 241/752 (32%), Positives = 348/752 (46%), Gaps = 106/752 (14%)
Query: 876 DVENSLVYATHK-KWFYL--VTNIVFEKNGYSPYKDS-----DSSSHVDHLISSYGIHLK 927
D+ +V A H K FY+ + N + +N + P K+ + SS+ + YG+ L
Sbjct: 993 DIVGRIVTAAHSGKRFYVDCIPNDMTAENSF-PRKEGYLGPLEYSSYAAYYKQKYGVDLV 1051
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL------EEYFDDLPPELCQLKIIGFSKD 981
+ KQPLLR + + +NLL R E + Y+ LPPELC L + S
Sbjct: 1052 YKKQPLLRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFLPPELCFLHPLPGSLV 1111
Query: 982 IGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
G+ LPSIM R+E++L+A++LK ++ G V A +L+ALT CQE F ER
Sbjct: 1112 RGAQR--LPSIMRRVESMLLAVQLKDMI------GYPVPALKILEALTAASCQETFCYER 1163
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
E+LGDA+LK+ V R+LFL + EG+LTR R V+N L + A LQ YI+ F
Sbjct: 1164 AELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRF 1223
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC------------------ 1143
P ++ A G + ++T S + ++ +
Sbjct: 1224 SPSRWAAPG--VLPVYDEDTNEEESSMFGNEIIENGTVAAKTLAADEFEDEEAEEGELDT 1281
Query: 1144 -SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
S + L KT+ADVVEAL+G + D G AA F+KWIG++V+F+ + T I S
Sbjct: 1282 DSGSYRVLSSKTMADVVEALIGVYYVDGGKYAANHFMKWIGVEVDFDFKE-TEYSIRPYS 1340
Query: 1203 FLPLSA--SLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYL 1259
+P + S+D L+ L F +GLLL+A H S G CYQRLEF+GDAVLD+L
Sbjct: 1341 -IPENVLRSVDFDKLQGALNISFNDKGLLLEAITHASRPSSGVSCYQRLEFVGDAVLDHL 1399
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-- 1317
IT +L+ Y L PG+LTDLR+ VNN+ FA VAV + L S+ L + I ++V
Sbjct: 1400 ITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDFVIE 1459
Query: 1318 --DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF 1375
+ + P + PKVLGD+ ES GAI LDSG + VWK+ L P++
Sbjct: 1460 VKNELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGCDTAVVWKVFQPLLHPMVTP 1519
Query: 1376 SNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEA 1435
L ++P+REL E C L++ + + G E V G + + RK A
Sbjct: 1520 ETLPMHPVRELQERCQQQAQGLEYKASRSGNIATVEVYVDG----IQVGMAQNPQKRKMA 1575
Query: 1436 IRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLK 1495
++ Q+ ++ G PK + L+
Sbjct: 1576 QKVGCQECPCCVEKRGRKPKLRRLKM---------------------------------- 1601
Query: 1496 ISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFT 1555
G G+PS T R L ++C W P + E G +H K FT
Sbjct: 1602 ------GRKKKNGNPSYT---------RQTLNDICLRRNWPMPLYRSVHEGGPAHAKRFT 1646
Query: 1556 FRVIVEIEAPEKIIECIGEPQAKKKGAAEHAA 1587
+ V V ECIGEP K A + AA
Sbjct: 1647 YGVRVNTSDKGWTDECIGEPMPSVKKAKDSAA 1678
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 233/484 (48%), Gaps = 49/484 (10%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI IL ++ + + I+FV R+VTA L + + L L+ L+G N
Sbjct: 430 TPKVQSLIKILLKYQHTEDFRAIIFVERVVTALVLPKVFEELPSLSFITSSSLIGHNNS- 488
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + KFR G +NLLVAT V EEGLDI+ C +VIRFDL +T+ ++IQSRGRA
Sbjct: 489 QEMRTGQMQDTIAKFRDGRMNLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRA 548
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCS 573
R P S+Y +V+ N ++N E+ + +E ++RT S +A T S
Sbjct: 549 RKPGSDYILMVERDNLSHEAFLRNARNSEETLRKEAIERTDISHLKGASKLISGEAPTDS 608
Query: 574 EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHI 628
+Y+V+S+GA +S V L+H YCS+LP D + +P+F + GG C +
Sbjct: 609 ---VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCRL 665
Query: 629 ILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFS 688
LP NAP ++ G SSM A++ CL A + LH++GA D LLP + + E E +
Sbjct: 666 QLPCNAPFEKLEGPVCSSMRLAQQAVCLDACKKLHQMGAFTDMLLPDKGSGAELEKVEQD 725
Query: 689 SDSDSYEGEGSRGELHEMLVPAVLRQSWT-------KSQYPVRLNFYFMQFI-----PDP 736
+ D G E + V +L+ W S V L Y ++ + DP
Sbjct: 726 DEGDPIPGTSRHREFYPEGVADILKGEWILSGKDSCDSSKLVHLYMYAIKCVNIGTSKDP 785
Query: 737 ADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILD 796
EF + + L E + +DL +AR LV G ++ + + LK
Sbjct: 786 FLTDVSEFAILFGNELDAEVLSMSMDLFIARTVETKATLVFRGPIEVTESKLASLK---- 841
Query: 797 RSEFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHKNS-----VDWKIIRRCLSSPV 846
F+ + + D E S++ + YL PV ++ ++W +I++ + V
Sbjct: 842 --SFHVRMMSIVLDVDVEPSTTPWDPAKAYLFAPVTGDESGDPIKDINWDLIKKITKTDV 899
Query: 847 FGTP 850
+ P
Sbjct: 900 WSNP 903
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 152/260 (58%), Gaps = 11/260 (4%)
Query: 41 GAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-L 99
GA + ++ PK+ ARKYQL++ + A ++ I +L TG GKT IA+LL+ L + L
Sbjct: 12 GAIEKKDVKPKEQAPKEQARKYQLDVLEHARKKXTIAFLETGAGKTLIAILLMKSLCNDL 71
Query: 100 IRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYE 157
++ +K + +FL P V LV QQA+VI E G++V +CG G + W++E + +
Sbjct: 72 HKQNKKMLAVFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGPRIFGIARRWQREFETKQ 131
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRI 217
VLVM QILL L H IKME I LLI DECHHA K HPY+ +M +FY +
Sbjct: 132 VLVMTAQILLNILRHSIIKMEAINLLIMDECHHAVKK--HPYSLVMSEFYHTTQKAKGHL 189
Query: 218 F-GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
F MTASPV KG S+Q + I +LE LD+ V++++D +DLE V P V +Y
Sbjct: 190 FLAMTASPVNLKGVSSQVDCAIKIRNLETKLDSVVFTIKDRKDLEKHVPMPSEVVVEY-- 247
Query: 277 VINDTSSSYVTCSEQLAEIK 296
D ++S + EQ+ +++
Sbjct: 248 ---DKAASLWSLHEQIKQME 264
>gi|224068194|ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa]
Length = 1817
Score = 307 bits (787), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 313/610 (51%), Gaps = 63/610 (10%)
Query: 881 LVYATHKKWFYLVTNIVFE---------KNGY-SPYKDSDSSSHVDHLISSYGIHLKHPK 930
+V A H + V +I ++ K GY P + SS+ D+ YG+ LK +
Sbjct: 1171 IVTAAHSGKRFYVDSICYDMTAEISFPRKEGYLGPL---EYSSYADYYKQKYGVELKFKQ 1227
Query: 931 QPLLRAKPLFRLRNLLHNR-KLEDSESHELEEYFDD-----LPPELCQLKIIGFSKDIGS 984
QPLLR + + +NLL R + DS + EE D LPPELC + + S G+
Sbjct: 1228 QPLLRGRGVSYCKNLLSPRFEHSDSNEGDAEENLDKTYYVFLPPELCLVHPLPGSLVRGA 1287
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
LPSIM R+E++L+A+ELK +++ P A +L+ALT CQE F ER E+
Sbjct: 1288 QR--LPSIMRRVESMLLAVELKDIINYPVP------ASKILEALTAASCQETFCYERAEL 1339
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGDA+LK+ V R LFL + EG+LTR R V+N L + A LQ YI+ F P
Sbjct: 1340 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQADRFAPS 1399
Query: 1105 QFFALGRRCPRICSKET----------ERTIHSQYDGRAPDDLNAEVRCSKG-------- 1146
++ A G + +ET E+++ G D E G
Sbjct: 1400 RWAAPG--VLPVFDEETKDGDSYIFDQEKSLAEDRTGMNHLDDGYENEIEDGELESDASS 1457
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF-LP 1205
+ L KT+ADVVEAL+G + + G A +KWIGIQVEF+ ++ +S+ F +P
Sbjct: 1458 YRVLSSKTLADVVEALIGVYYVEGGKNAVNHLMKWIGIQVEFDHEEIDG---ASRPFNVP 1514
Query: 1206 LSA--SLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITS 1262
S S+D TLE L +F RGLL++A H S G CYQRLEF+GDAVLD+LIT
Sbjct: 1515 ESVLRSVDFDTLEGALDIKFNDRGLLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITR 1574
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV----D 1318
+L+ Y L PG+LTDLR+ VNN+ FA VAV + L S+ L + I ++V D
Sbjct: 1575 HLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEKQIRDFVREVQD 1634
Query: 1319 YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNL 1378
++ P + PKVLGD+VES GAI LDSG + VWK+ L P++ L
Sbjct: 1635 ELLKPVFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETL 1694
Query: 1379 QLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRI 1438
++P+REL E C L++ + + G E + G V A N +K A ++
Sbjct: 1695 PMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQVGV-----AQNPQKKMAQKL 1749
Query: 1439 ASQQLFSKLK 1448
A++ LK
Sbjct: 1750 AARNALVVLK 1759
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 150/245 (61%), Gaps = 11/245 (4%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKSICIFLAP 113
P++ AR+YQL++ +A ++N I +L TG GKT IAVLLI + + L R+ +K + +FL P
Sbjct: 284 PEEQARQYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKILAVFLVP 343
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+VI E G++V +CG + W++E + +VLVM QILL L H
Sbjct: 344 KVPLVYQQAEVIRER-GYQVGHYCGEMGQDFWDTRRWQREFETKQVLVMTAQILLNILRH 402
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGAS 231
IKME I LLI DECHHA K HPY+ +M +FY K P +FGMTASPV KG S
Sbjct: 403 SIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVS 460
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+Q + I +LE+ LD+ V +++D ++LE V P V +Y D ++S + EQ
Sbjct: 461 SQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPAEVVVEY-----DKAASLWSLHEQ 515
Query: 292 LAEIK 296
+ +I+
Sbjct: 516 IKQIE 520
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 156/372 (41%), Gaps = 54/372 (14%)
Query: 514 TVASFI--QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD--- 568
VA+ + +SRGRAR P S+Y +V+ GN ++N E+ + +E ++RT
Sbjct: 716 VVAALVLPKSRGRARKPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLK 775
Query: 569 ------AFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDD 620
A +Y+V+S+GA +S V L+H YCS+LP D + +P F +
Sbjct: 776 DTSRLIAVDSIPGTVYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPGFIMEKHEK 835
Query: 621 LGGTI---CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQED 677
GG C + LP NAP ++ G CL A + LH++GA D LLP +
Sbjct: 836 PGGPTEYSCKLQLPCNAPFEELEGPA----------VCLAACKKLHEMGAFTDMLLPDKG 885
Query: 678 NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT-------KSQYPVRLNFYFM 730
+ E + + + + + G E + V L+ W + + L Y +
Sbjct: 886 SEEEKDKVDQNDEGEPLPGTARHREFYPEGVAKTLQGEWILCGRDGCNNSKVLHLYLYGV 945
Query: 731 QFI-----PDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ 785
+ + DP F + + L E + +DL +AR LV G + +
Sbjct: 946 RCLNIGTSNDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTMITKASLVFRGRIPITE 1005
Query: 786 FQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTF-----YLLLPVIFHKN-----SVDW 835
Q LK F+ + + D E S++ + YL +P++ K+ +DW
Sbjct: 1006 SQLASLK------NFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVSDKSVDPIKEIDW 1059
Query: 836 KIIRRCLSSPVF 847
++ + + +
Sbjct: 1060 DLVENIIGTDAW 1071
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 306 bits (785), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 249/783 (31%), Positives = 365/783 (46%), Gaps = 114/783 (14%)
Query: 863 GPLQLHNGWSSESDVENSLVYATHKK-WFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISS 921
GPL+ +++ +D +Y + +FY + N+ + YK S L
Sbjct: 1304 GPLE----YNTYADYYKQKIYVVQDRLFFYFLHNLRLLR----LYKSSSI-----MLFIR 1350
Query: 922 YGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYFDDLPPELCQLKIIGFS 979
YG+ L +QPL++ + + +NLL R + ES + + Y+ LPPELC + + S
Sbjct: 1351 YGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYYVFLPPELCVVHPLSGS 1410
Query: 980 KDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSL 1039
G+ LPSIM R+E++L+A++LK+L+S P +L+ALT CQE F
Sbjct: 1411 LIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSKILEALTAASCQETFCY 1462
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L + A LQ YI+
Sbjct: 1463 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQAD 1522
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDLNAEVRCSKG------- 1146
F P ++ A G P + ++T+ S +D D+ + G
Sbjct: 1523 RFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDVFEDGEMEDGELEGDLS 1580
Query: 1147 -HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
+ L KT+ADVVEAL+G + + G AA +KWIGI VE + +V +
Sbjct: 1581 SYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES 1640
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYL 1264
+ S+D LE L ++F +GLL++A H S G CYQRLEF+GDAVLD+LIT +L
Sbjct: 1641 VLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHL 1700
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS 1324
+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+ L + +N I S
Sbjct: 1701 FFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQVNKIKKQSILFS 1760
Query: 1325 ST--------------RE-VKEGP----------------RCPKVLGDLVESSLGAILLD 1353
+ RE VKE + PKVLGD+VES GAI LD
Sbjct: 1761 KSFKCLTVWLLFVFQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLD 1820
Query: 1354 SGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAK 1413
SG + WK+ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1821 SGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVF 1880
Query: 1414 VTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARL 1473
+ G V A N +K A ++A++ + LK K +S+ +
Sbjct: 1881 IDGVQVGV-----AQNPQKKMAQKLAARNALAALKE--------------KEIAESKEKH 1921
Query: 1474 IGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAAN 1533
I N A +D E + G+ + P R L ++C
Sbjct: 1922 IN------NGNAGEDQ-------GENENGNKKNGHQP----------FTRQTLNDICLRK 1958
Query: 1534 CWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWC 1593
W P++ C KE G +H K FTF V V ECIGEP K A + AA +L
Sbjct: 1959 NWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLEL 2018
Query: 1594 LER 1596
L +
Sbjct: 2019 LNK 2021
Score = 294 bits (753), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 267/955 (27%), Positives = 416/955 (43%), Gaps = 191/955 (20%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQ-------QAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQ------------- 155
V Q QA+VI F+V +CG G S W++E +
Sbjct: 309 VYQVPPNKKHQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQFLKLTSFFLFS 367
Query: 156 -YEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-K 213
+VLVM QILL L H I+ME I LLI DECHHA K HPY+ +M +FY K
Sbjct: 368 STQVLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDK 425
Query: 214 VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ 273
P IFGMTASPV KG S+Q + I +LE LD+ V +++D ++LE V P V +
Sbjct: 426 RPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVE 485
Query: 274 YGPV-----INDTSSSYVTCSEQLAEIK----REQYISALS-------RKLHDHQSLRNT 317
Y +++T + E+ A+ + Q++ A R+++ +
Sbjct: 486 YDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTES 545
Query: 318 TKQLNRLHD--SMKFCLENLGVCGALHASYILLSG---DET------------------- 353
N +H ++ + L LG A LS DE
Sbjct: 546 DGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVS 605
Query: 354 -MRNELIEA-----------------------EGNTIDDSLCRFASQASEVFAAICRRDG 389
++ EL+E EG DD + EV A
Sbjct: 606 LLQCELLEGAAAEKVAAEVGKPENGNAHDEMEEGELPDDPVVSGGEHVDEVIGA------ 659
Query: 390 IASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYI----LQ 445
+ + + K+ LI +L ++ + IVFV R+V A L +
Sbjct: 660 ---------AVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVRIKVFA 710
Query: 446 NLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
L L+ RC ++G N + M + M+ + KFR G + LLVAT V EEGLDI+ C +
Sbjct: 711 ELPSLSFIRCASMIGHNNS-QEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNV 769
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYAFLVD---------------SGNQRELDL---- 546
V+RFDL +TV ++IQSRGRAR P S+Y +V+ +G+Q D+
Sbjct: 770 VMRFDLAKTVLAYIQSRGRARKPGSDYILMVERYIKSFKNYILIFVTTGHQISTDMSTCV 829
Query: 547 -----------IKNFSKEEDRMNREIMDRT------------SSDAFTCSEERIYKVDSS 583
++N E+ + +E ++RT S DA + +YKV+++
Sbjct: 830 TCRGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT---VYKVEAT 886
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIHQ 638
GA +S V L+H YCS+LP D + +P+F + GG C + LP NAP
Sbjct: 887 GAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEI 946
Query: 639 IVGTPQSSMEAAKK-DACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
+ G SSM A++ D + A + LH++GA D LLP + + + E + + G
Sbjct: 947 LEGPVCSSMRLAQQVDIIVSACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGT 1006
Query: 698 GSRGELHEMLVPAVLRQSWTKSQYPV----RLNFYFMQFI--------PDPADRIYREFG 745
E + V VL+ W S V +L +M + DP EF
Sbjct: 1007 ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFA 1066
Query: 746 LFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFV 805
+ + L E + +DL++AR L G + + Q LK +F+ +
Sbjct: 1067 ILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLK------KFHVRLM 1120
Query: 806 PLGKDDYCESSSSTF-----YLLLPVIFHKN-----SVDWKIIRRCLSSPVFGTP 850
+ D E S++ + YL +PV + + ++W+++ + + + P
Sbjct: 1121 SIVLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNP 1175
>gi|443893959|dbj|GAC71147.1| dsRNA-specific nuclease Dicer and related ribonucleases [Pseudozyma
antarctica T-34]
Length = 1764
Score = 306 bits (783), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 414/1565 (26%), Positives = 629/1565 (40%), Gaps = 261/1565 (16%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--------QKSICI 109
+ R YQLEL + A N++V L TG GKT I+VLL L H+ +P ++ +
Sbjct: 255 VPRSYQLELAQIAKSGNVLVCLDTGSGKTLISVLL---LQHIHSQPAPPPYPATKRKVSF 311
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSK-----RLKSHCD------WEKEIDQYEV 158
FL V LV QQ+ VI + V G K R K D W + ++V
Sbjct: 312 FLVNLVPLVHQQSSVIAGNSDLAVGKLYGELKEATRGRNKLTVDNWHAPQWAALLQSHQV 371
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIF 218
+V Q L L H FIKM + L+IFDE HHA NHP+ +IMK + + P+IF
Sbjct: 372 IVATAQCFLDALIHGFIKMSDLNLIIFDEVHHAL--KNHPFFRIMKYYRLAPADQRPKIF 429
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDA--EDLESFVSSPVVRVYQYGP 276
GMTASP+ + ++ + L++++DA++++V A +DL+ P V ++ P
Sbjct: 430 GMTASPIFTRSGMFH----EAAHYLQSIMDARIHTVSKAALDDLDKVKQKPDELVVEFAP 485
Query: 277 ---VINDTSSSYVTCSEQLAEIKREQY-ISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL 332
V++D L+ + RE + A+ L D Q + + +++ +
Sbjct: 486 FVTVLDDELGGV-----PLSNLSREMLAMFAVDVALEDDQLDPVQRHFRDEVQPKLEYTM 540
Query: 333 ENLGVCGA---LHASYILLSG----------------------DETMRNELIEAEGNTID 367
+LG G H++ + L D +MR+ +G D
Sbjct: 541 RHLGAVGCDVFWHSALLELRSRARKWAVISRDKRTLVSDAWIVDASMRSPRENGDG---D 597
Query: 368 DSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF-----------SKKLLRLIGIL 416
D + AA + + + +P S KLLRL+ +L
Sbjct: 598 DGAEEPQKSPLPLGAAHLSNSSELNRRILLHMRAQPALPDELRIDASNASPKLLRLVELL 657
Query: 417 STFRLQQHMKC-IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMK- 474
F C IVFV R TA L +++ L FL+G + G + AM
Sbjct: 658 QCFEPDAANFCAIVFVERRQTATLLVKLIKRAPGLGFIHPEFLLGHDNGSAAGGAPAMDW 717
Query: 475 ----SILEKFRS-GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
+L +FR NLLVAT + EEGLDIQ LVIRFDL SF+QSRGRAR
Sbjct: 718 HDQVQVLNRFRRRAPTNLLVATSIAEEGLDIQAANLVIRFDLFNRHISFLQSRGRARARG 777
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREI-------MDRTSSDAFTCSE-------- 574
S + + +SGN +I N E R ++ + D +DA C E
Sbjct: 778 SRFILMAESGNADHAKVILNAFDTEARRSKWLDAITESGGDGGDADAVLCDEWQQRLHIE 837
Query: 575 ------ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF---DDLGGTI 625
E ++GA + A SL+ Y + L H E Y D LGGT
Sbjct: 838 PQDPDAEPAIHEPTTGARLYAEDAPSLVAHYAATL-HSEHLKDAVLAYRMQCTDVLGGTP 896
Query: 626 ---CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNAT-- 680
C + LP+ A + + P SS + AK+ A L+A + L +LG L+++L+P+ AT
Sbjct: 897 AFSCTLELPSTAAVRSVDSGPCSSKKRAKRMAALRACQQLRQLGELDEWLMPKLVGATVA 956
Query: 681 --EDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTK--SQYPVRLNFYFMQFIPDP 736
+ P+ + + G G + VP W + SQ + F+P
Sbjct: 957 DRDAAPVAMNPHHKEWRGTG-----QPIHVPVKKMDGWARFYSQSAKEEAQWHATFLPMG 1011
Query: 737 A-DRIYREFGLFVKSLLPGEAEHLKVDLHLARG-----RSVMTKLVPSGIMQ---AQQFQ 787
+ D Y+ L + LP E L + H A G R+ VP G + A QF
Sbjct: 1012 SFDAGYQPLLLLTRGALPA-TERLTL-YHAASGEMKPIRAASLGAVPLGSTELEAATQFT 1069
Query: 788 EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVF 847
F+ +L R E G DD L+ PV D S F
Sbjct: 1070 R-FVFALLSRRES-------GPDD-----GEPAVLVAPVRVADGVSDVT----AWSQLAF 1112
Query: 848 GTPGG-SVDRKSLPSHGPLQ-----LHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKN 901
P R L G LQ +G++S + Y+ ++ +
Sbjct: 1113 DWPATLESSRIDLSELGSLQNRVLTRQHGYASNA--------------LYIFQDVRHDLT 1158
Query: 902 GYSPYKDSDSSSHVDHLISSYGIHL-KHPKQ----------------PLLRAKPLFRLRN 944
SP + VD + HL K+ ++ PL+ L +L N
Sbjct: 1159 AISPLPPKTGTETVDETQTYLSQHLTKYARRVNADEAAALVTQLASTPLVAVTKLGKLTN 1218
Query: 945 LLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
LL S + F + P ++ D+ SS+ LPSI+ R + LL+A +
Sbjct: 1219 LL-TAPSRGSRAAATPVRF--IIPRF--YRVFPLRSDVLSSVLALPSILARYDQLLLASQ 1273
Query: 1005 LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDT 1064
L F EV +++L+AL + + ERLE LGD FLK H F
Sbjct: 1274 CNDTL---FSGALEV--DLVLEALASPAARCGLDYERLEFLGDTFLKLVATCHTFTTQLG 1328
Query: 1065 VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERT 1124
E EL + N LL+ A R L + FA + C+
Sbjct: 1329 RTEAELHLANKGILTNVRLLREARRLQLGRW---------ALFASADFRAKRCTAPMSGW 1379
Query: 1125 IHSQYDGRAPDDLNAEVRCSKGH-HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIG 1183
+ P V G + +KT+ DVVEAL+GA + G AA + +
Sbjct: 1380 MGGALLQAGP------VEVGPGETDVIREKTLPDVVEALIGAALLGGGTDAALHVCRVLT 1433
Query: 1184 IQVE-----------FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQA 1232
+ E + ++T++ + + S + L+ L GH + + L L+A
Sbjct: 1434 LIPESIRRLDDFNTLLQELKLTSVTQGWERRVDRSG---LDHLQSLFGHVYRYPHLGLEA 1490
Query: 1233 FVHPS-FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
F HPS + YQRLEFLGDA LD I Y++S +P L PG+LT L+ ML +N A
Sbjct: 1491 FTHPSLLASVLPSYQRLEFLGDAWLDLYIVRYIFSAHPDLSPGELTALKGMLASNSTLAA 1550
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST----REVKEGPRCPKVLGDLVESSL 1347
+ ++++ +S VL T++ Y M +V G PK L D VE+S
Sbjct: 1551 LGHRLGLHRYVASNSEVLVSTLSAYSTAMEGAGEGTAYWHKVDVG--VPKALADAVEASF 1608
Query: 1348 GAILLDSGFNLNTVW----KIMLSFLDPILKFSNLQLNPIRELL-----------ELCNS 1392
+I++DS F+ + ++ + F + + ++ L ++ LL L NS
Sbjct: 1609 ASIVVDSSFDPSMAQGVFDRLFVPFYNRFCPWDSIPLTDVKRLLLSTNCILTITCSLTNS 1668
Query: 1393 YDLDLQF------PSLKKGGKFLAEAKVTGKDKDVFISA----CATNLSRKEAIRIASQQ 1442
++D+ S+ G +A+ K T + A A N R E R Q
Sbjct: 1669 DEMDVDVLLEELTVSIVMHGTMIAQLKTTPPSLNHLAKAHEILNAVNQKRPEQQRFLLAQ 1728
Query: 1443 LFSKL 1447
L L
Sbjct: 1729 LARTL 1733
>gi|291000766|ref|XP_002682950.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
gi|284096578|gb|EFC50206.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
Length = 1386
Score = 305 bits (782), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 346/1375 (25%), Positives = 603/1375 (43%), Gaps = 217/1375 (15%)
Query: 88 IAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGF---------------- 131
+A++LI + + + K + +F+A LV QQA+ I ++ +
Sbjct: 2 VAIMLIDYMLNETEQNDKKL-VFIAENRILVNQQAEHIRSTLKYLETERLEQQDSKSIDN 60
Query: 132 -------KVRTFCGGS---KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIA 181
V + G S +L+S+ KE+ + +V+V L L H I+ME I+
Sbjct: 61 ISKNIDGMVACYVGDSGLLNKLRSN----KELKKKKVIVTTAAFLQNLLTHNIIEMESIS 116
Query: 182 LLIFDECHHAQVKSNHPYAKIMKDFYKP--DIMKVPRIFGMTASPVVGKGASAQANLPKS 239
LLI DECHH +HPY IM +Y + K P+IFGMTAS + + +ANL K
Sbjct: 117 LLIIDECHHCG-DGDHPYKVIMTQYYHTIKQVEKRPKIFGMTASAIRSLNET-KANLQKQ 174
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKR-E 298
LE LD K+ ++ ++L S + ++ + N+ +Y + + + +I +
Sbjct: 175 --KLEAYLDCKLTTISSEDELYS-------ELREHTNLPNEIILTYESTNSESTKIDDLK 225
Query: 299 QYISALSRKLHDHQSLRNT-TKQLNR-LHDSMKFCLENLGVCGALHASYILLSGDETMRN 356
+ + + L +++ +++R L + + L+NLG + Y+ + D
Sbjct: 226 DFCTLIVENLTKFSTIQTKDIIEISRILFNDFNYILDNLG--SSCLKDYLTIIFDHI--- 280
Query: 357 ELIEAEGNTIDDS-LCRFASQAS----------EVFAAICRRDGIASDLSCIEVLKEPFF 405
E + E ++ S L F+S +S E+ + R+ + + + ++ +P
Sbjct: 281 EERKQENQSLSTSELVSFSSDSSYQQLKKNQEFEIIVSESVRNKLTNKIE--KIFPKPSP 338
Query: 406 SKKLLRLIGILSTF----RLQQHMKCIVFVNRIVTARALSYILQNLKFLAS--WRCHFLV 459
S+KL L +L+ M+CIVF R TA LS ++ A C F++
Sbjct: 339 SRKLKLLEEVLNEHFPENNTTNQMRCIVFCERRHTAILLS------RYFAKKGLPCDFII 392
Query: 460 GVNA-------GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD-L 511
G NA G K + KS E+FRSGEL L T V EEG D+ C LVIRFD
Sbjct: 393 GHNALSVRTKLGFKKNTGFEQKSKTERFRSGELKCLFCTNVVEEGFDVPACNLVIRFDKF 452
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT 571
+ + ++IQSRGRAR +S++ +V+S + + +L KN + +++M +I D T +++
Sbjct: 453 TDFLRAYIQSRGRARKQESKFIMMVNSTDLTQQELCKNGKRLQEKMLTQISDDTPNNS-E 511
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
+ IY+ S A ++ + L ++YC+ P+ KPKF + D + I P
Sbjct: 512 IEDILIYET-PSKAKLTLNNSIRLYNQYCAVFPNQSIDEKKPKFSIYADGPFFVTEITFP 570
Query: 632 ANAPIHQIVGTPQSSMEAA---------KKDACLKAIEDLHKLGALNDYLLPQEDNATED 682
N P+ + + A K+ KA++ LHK L+D L P+
Sbjct: 571 TNCPVPVFSISNNHEDDPAQYRLNKLVSKRYCAFKAVQLLHKYKELDDSLFPRYS----- 625
Query: 683 EPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW-------TKSQYPVRLNFYFMQFIPD 735
+F+S + S L + P + +W ++ P + + F+ +
Sbjct: 626 -KYVFASTEAEFASPASMATLLPQM-PEIF--NWREKKLNSIQTDNPSHCVYIYDIFLDN 681
Query: 736 PADRIYREFGLFVKSLLPGEAEHLK-VDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVI 794
A +F + + + + E L ++ + GR + K + S + + F
Sbjct: 682 NA----TDFQFIIPNEIDSDLEELGLLNFRMNGGRHITIKKMESTTVDNDYILKCF---- 733
Query: 795 LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSV 854
+ EF F + K + P +N DW F P +
Sbjct: 734 -EYHEF--MFNKVAK------------ISFPDQKQRNLQDWTF---------FIIPKQAQ 769
Query: 855 DR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSS 913
+P +Q H G +E+ ++N ++ + YL+ NI F+KN S + D
Sbjct: 770 QHFIDVPVLDIIQHH-GKEAENILKNMILETIYNHRVYLLQNIEFDKNPKSHFDTEDFPD 828
Query: 914 HVDHLISSYGIHLKHPKQPLLRA-KPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+ + +G+ ++ P+QPLLRA +P F S ++E L PE
Sbjct: 829 YKTYYKEKWGLEIERPQQPLLRAYQPRFSTLG-----------STQVEHQNIFLVPEF-- 875
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVA------IEL-KHLLSASFPEGAEV--SAEM 1023
L F+ ++ L L P ++R N L+ EL + ++ A+ E + + E+
Sbjct: 876 LTACSFTIEMLRFLKLAPEFLYRYYNRLITSIFSKQFELFQPIVDATLLEDGKTLEAFEL 935
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L +ALT ++ Q + E+LE GD+ LKY V +H++ G L++ + V+N L
Sbjct: 936 LEEALTAKRSQVGANYEKLEFFGDSILKYIVSKHIYHEFPLYSSGSLSQLQHKFVSNYFL 995
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
+A L ++I +P + Q + I + D+ N E
Sbjct: 996 ASVARNTRLPLFIITEPLNTSQLV---------------QNIGGFKSNKFADETNIEAEY 1040
Query: 1144 SKGHHWLHKKTIADVVEALVG--AFIDDSGFKAATAFLKWIGIQV-EFEASQVTNICISS 1200
K +ADVVE+++G I + FL +G+ + + E S +I ++
Sbjct: 1041 ---------KVLADVVESIIGFCYHIFGGSLEQINRFLGLVGVSLPKGEISGSEDIFMNQ 1091
Query: 1201 KSFLP---LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLD 1257
K L +D+ L L QF + GLLL+AF+HPS+N + Y+RLEFLGD+VL
Sbjct: 1092 KLLLRNHFEKLKIDLYKLTEKLNFQFENSGLLLEAFIHPSYNGVFN-YERLEFLGDSVLG 1150
Query: 1258 YLITSYLYSVYPK---LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
++TS ++ + K G ++ LR +V N+ FAN+ ++ ++IF N +++ +
Sbjct: 1151 LIVTSKIFEKFHKNSSFSLGMMSKLREKIVMNKNFANLCIENQLQNYIIFSGNHIAQQV- 1209
Query: 1315 NYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
K+ K+L D+ ES GA+ +DS ++L+TV I FL
Sbjct: 1210 ------------VHSKDDGEYVKMLSDVFESLAGALFVDSHYDLDTVKLIYDEFL 1252
>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
Length = 1695
Score = 305 bits (781), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 243/780 (31%), Positives = 360/780 (46%), Gaps = 102/780 (13%)
Query: 857 KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDS----- 911
+ +P G L + +G+ + +V A H V ++ F+ S + D
Sbjct: 967 QEVPPEGKLLIVDGFVEVEVLVGRIVTAVHSGKRLYVDSVRFDMTADSSFPQKDGYLGPL 1026
Query: 912 --SSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYFDDLP 967
+S+ D+ YG+ L KQPLLR + + +NLL R +S + + Y+ LP
Sbjct: 1027 EYTSYADYYKQKYGVELVCKKQPLLRGRGVSHCKNLLSPRFETSGDSLDALDKTYYVMLP 1086
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PELC + + S G+ LPS+M R+E++L+AI+LKH + +P ++A + A
Sbjct: 1087 PELCLIHPLPGSLVRGAQR--LPSVMRRVESMLLAIQLKHQID--YP----IAASKV--A 1136
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
LT QE FS ER E+L DA+L++ V LFL + EG+LTR R V+NS L + A
Sbjct: 1137 LTAASGQETFSYERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHA 1196
Query: 1088 ARNNLQVYIRDQPFDPCQFFALG--------RRCPRICSKETE--------------RTI 1125
LQ YI+ F P ++ A G R KE++ I
Sbjct: 1197 LEKGLQSYIQADRFAPSRWAAPGVPPAFDEDLRDGDDSDKESKPEVEREVVEIVGEEGEI 1256
Query: 1126 HSQYDGRAPDDLNAEVRCSKG-HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
+ + + + + E+ G + L KT+ADVVE +G + + G +AAT F+ W+GI
Sbjct: 1257 VKELNTESENMEDGEIEGDSGSYRVLSSKTLADVVEVFMGMYYVEGGGEAATHFMNWVGI 1316
Query: 1185 QVEF---EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL 1241
VEF E T C ++ + S+D ++L+ +GH+F R LL++A H S L
Sbjct: 1317 PVEFDDVETDLATGGCQVPETVM---RSIDFSSLQKNVGHEFRERSLLVEAITHASRPSL 1373
Query: 1242 G-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYK 1300
G CYQRLEF+GDAVLD+LIT YL+ Y L PG+LTDLR+ VNN+ FA VAV S++
Sbjct: 1374 GVPCYQRLEFVGDAVLDHLITRYLFFKYTNLPPGRLTDLRAAAVNNENFARVAVKHSYHL 1433
Query: 1301 FLIFDSNVLSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGF 1356
L S L I N+V+ + + V + PKVLGD+ ES GA+ LD+
Sbjct: 1434 HLRHGSTALETQIRNFVNDIHSELDKPGVNSFGLGDFKAPKVLGDIFESIAGALFLDARL 1493
Query: 1357 NLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTG 1416
+ + VWK+ L P++ L ++P+R L E C L++ + E V G
Sbjct: 1494 DTHQVWKVFEPLLQPMVSPETLPIHPVRGLQERCQQEAEGLEYKVSRAESVATVEVYVDG 1553
Query: 1417 KDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGY 1476
SA +K A ++ ++ KLK
Sbjct: 1554 VQIGSTQSA-----QKKMAQKLGARNALVKLK---------------------------- 1580
Query: 1477 DETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWK 1536
D+ I V A +N + G S G + T R + +LC W
Sbjct: 1581 DKEVIKVKAEAEN-------GDLNAGKSSKNGHTNFT---------RKTINDLCLKRQWP 1624
Query: 1537 PPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
P + C E G +H K FT V V EC+GEP A K A + AA +L L R
Sbjct: 1625 MPQYKCVLESGPAHAKKFTLSVRVLTTTDGWTEECVGEPMASVKKAKDSAALVLLATLRR 1684
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 227/486 (46%), Gaps = 52/486 (10%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL 465
+ K+ LI +L ++ + I+FV R+ L LQ+ L +C L+G N
Sbjct: 420 TPKVQSLIKVLIGYQHTDDFRAIIFVERVWVGVTLCRSLQSCPSLKFVKCASLIGHNNN- 478
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ M M+ + KFR G + LLVAT V EGLDI+ C +VIRFDL +TV ++IQSRGRA
Sbjct: 479 QDMPTRQMQETISKFRDGRVTLLVATSVAAEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 538
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS-----SDAFTCS----EER 576
R P S+Y +++ GN + +N E+ + +E ++RT +A S E
Sbjct: 539 RKPGSDYILMLERGNLQHEAFFRNAKNSEETLRKEAIERTDLGEKRENAILASIDIGEGE 598
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILP 631
IY+V ++GA +S V L+H YCS+LP D + +P+F +D G I C + LP
Sbjct: 599 IYQVPATGAVVSMNSAVGLIHFYCSQLPSDRYSLLRPEFIMNKIEDQRGAIRYSCRLQLP 658
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
+AP + G +SM A++ L+ ++ +H++GA D LL + + E + S +
Sbjct: 659 CHAPFEAVEGPECNSMRGAQQSCVLEGLQKMHEMGAFTDMLLSNKGSREEAAKLEGSEEG 718
Query: 692 DSYEGEGSRGELHEMLVPAVL--------RQSWTKSQYPVRLNFYFMQ-----FIPDPAD 738
+S G E + + +L + S TK V + Y ++ F D
Sbjct: 719 ESLPGTSRHREYYPEGIADILKGDRIVAEKDSDTKEGSKVLVFMYTVKCENVGFSRDSLL 778
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMT--------KLVPSGIMQAQQFQEMF 790
+F L V L + + ++L +A ++T S + + + F
Sbjct: 779 TETSDFTLLVGQQLHDQVLTMTINLFVANPTLLITMSWKKRDLDCSNSQLTELKSFHVRL 838
Query: 791 LKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS------VDWKIIRRCLSS 844
+ ++LD N E D + YL PV+ HK++ VDW ++RR + +
Sbjct: 839 MSIVLD---VNVEPATTRWD------PAKAYLFAPVL-HKDASDPKDLVDWVVMRRTIET 888
Query: 845 PVFGTP 850
+ P
Sbjct: 889 DSWSNP 894
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 125/216 (57%), Gaps = 13/216 (6%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK-PQKSICIFLAPTVAL 117
AR YQLE+ +A + + +L TG GKT IA+LL+ ++R+ ++ + +FL P V L
Sbjct: 23 ARTYQLEVLAQAKVKITVAFLDTGAGKTLIAILLMKHKHQVLREYDKRMLALFLVPKVPL 82
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA VI F V +CG GS R W++E D +V VM QILL L H +
Sbjct: 83 VYQQADVIRNGTKFSVGHYCGEMGS-RFWDARGWQREFDTKDVFVMTAQILLNILRHSIV 141
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGAS 231
KME I LLI DECHHA K HPY+ +M +FY +M K P +FGM ASPV KG S
Sbjct: 142 KMEAIHLLILDECHHAVKK--HPYSLVMSEFY---LMTPKDKRPCVFGMIASPVNLKGVS 196
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
Q + I +LE+ LD+ V ++ D ++LE V P
Sbjct: 197 NQEDCAIEIRNLESKLDSIVCTIRDRKELEKHVPLP 232
>gi|346318518|gb|EGX88121.1| RNase3 domain protein [Cordyceps militaris CM01]
Length = 1455
Score = 302 bits (774), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 374/1410 (26%), Positives = 590/1410 (41%), Gaps = 225/1410 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ EL ++A ++N IV L TG GKT IA++L+ EL + F+
Sbjct: 64 REYQNELFERAKKKNTIVVLDTGSGKTLIAIMLLRHVLEQELEDRSNGCHRKTAFFIVDK 123
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGS----KRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
VAL QQ +V++ ++ F + T C G ++++SH W++ D+ ++V Q+LL CL
Sbjct: 124 VALCVQQYQVVKSNLPFPI-TKCYGDLQPIEQVQSH--WDELFDKNMIVVCTAQMLLDCL 180
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA 230
H FI M+ I LLIFDE HHA K HPYA IMK +Y + PRI G+TASP+
Sbjct: 181 SHGFINMKQINLLIFDEVHHA--KKEHPYAAIMKRYYPRNDDAKPRILGLTASPI----D 234
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ-----YGPVINDTSSSY 285
+ ++ S+ LE+LL +++ +V D E + V R Q Y P ++Y
Sbjct: 235 TGTLDMDASVQQLESLLCSEIATVSD----EVLEAGWVKREQQEKVCFYQPP-QPIQNAY 289
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG-VCGAL--H 342
+ +A+ R +I LS +H C +G V G H
Sbjct: 290 TELTAMVADYAR--HIPQLSSAVH---------------------CAAKMGSVLGPWCAH 326
Query: 343 ASYILLSGDETMRNELIE-AEGNTIDDSLCRF--ASQASEVFAAICRRDGIASDLSCIEV 399
+ LL D TMR ++ A N + S R+ S A E + + + +
Sbjct: 327 RFWQLLMTDNTMRTMTLQSARSNRVYFSYDRYDAVSAAFESLGPLVNHHQLTTLPT---- 382
Query: 400 LKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALS-YILQNLKFLASWRCHF 457
E S KL L L F + KC+VFV+ A L+ Y Q + F
Sbjct: 383 -DEGATSSKLTVLRETLCVAFEKNRATKCLVFVDEQYVALVLADYFQQPGTAPSGMVADF 441
Query: 458 LVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
++G++ + ++S+ L F+ G+ N L AT V EEGLDI C LVIRFD+ +
Sbjct: 442 MIGLSRASAFSNVSQRQQIMKLNNFKFGDTNCLFATSVAEEGLDIPACDLVIRFDMCVSA 501
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM----DRTSSDAFT 571
+IQSRGRAR S + +++ N + + +N + + + R DR
Sbjct: 502 IQYIQSRGRARKASSVFITMMEQDNNQHMSRFQNVNIDALSLRRFCQSLPADRKIEKYER 561
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E ++ ++S +S + +L R+ S L +P P++ C +ILP
Sbjct: 562 PPERELFVAETS--TLSNQNSMVVLARFVSTLGQGTEKSPAPEYVVSGVGTNFTCWVILP 619
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
+AP G+ + S A+ A +A L LG++N L P + P + ++
Sbjct: 620 DSAPFKSTSGSMERSKIKARCAAAYEACTRLIDLGSINKNLQP---TFRKKLPKMRNA-- 674
Query: 692 DSYEGEGSRGELHEMLV-PAVLRQSWTK--SQYPVRLNFYFMQFIPDPADRIYREFGLFV 748
+ + ++M++ P V WT ++ P +L F+Q PD A L
Sbjct: 675 -RLALRDKKQKQYDMVIKPKV----WTSLPAEIPTQLFQTFIQVHPDSAG--ITTMTLLT 727
Query: 749 KSLLPG-EAEHLKVDLHLARGRSVMTKLVPSGIMQ--AQQFQE-------MFLKVILDRS 798
+ LP E L V + L ++ LVP G+++ A+Q Q+ +F +V +
Sbjct: 728 REKLPDIEPIRLFVTIDL----TMSATLVPGGVVEVSAEQVQQLAAFTLCLFGQVFSKQF 783
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLL-LPVIFH---KNSVDWKIIRRCLSSPVFGTPGGSV 854
+ +E +P FYL V H K +VDW+ + + S
Sbjct: 784 DARAEEIP-------------FYLAPASVSLHGPEKCAVDWRRVEHTVLS---------- 820
Query: 855 DRKSLPSHGPLQLHNGWSSESDVENSLVYATH---KKWFYLVTNIVFEKNGYSPYKDSDS 911
+K P P + + V H +K+F +P D
Sbjct: 821 -KKRDPEVKPQDM---------MRQQFVVDPHDGSRKFFIYEIVPTLRATDPAPAGIPDH 870
Query: 912 SSH----VDHLISSYGIHLKHP---------KQPLLRAKPLFRLRNLLHNRKLEDSESHE 958
+ D I Y K P +QP+ RA L RN L S +
Sbjct: 871 KNPGYQLSDKSIMQYSCSTKQPHRQKIVFDTEQPVYRALLLSLRRNFL--------RSDD 922
Query: 959 LEEYFDDLPPELCQ--LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFP-- 1014
+E +D P L LKI D+ + LLPSI++ ++ LV E +L + P
Sbjct: 923 VEAAKEDQPCYLTLQCLKISPIPADVARAALLLPSILYFVDCTLVVGEALQMLGLNIPLP 982
Query: 1015 --------EGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVD 1066
G + E +KA Q + ERLE LGD FLK ++
Sbjct: 983 LLLQAFTKNGVDADDEEDVKADEEHGGQRNY--ERLEFLGDTFLKMGTTIAMYTHKTNAT 1040
Query: 1067 EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIH 1126
E E R + N NLLK A L YIR + F+ ++ P + R +H
Sbjct: 1041 EFEHHVDRMLMLCNKNLLKTALDLGLHTYIRSESFNRRTWY------PSL------RLVH 1088
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DDSGFKAATAF 1178
+ P +A L KTIADV EA++GA D KA T
Sbjct: 1089 GK-----PTKASAIQN-------LGDKTIADVCEAIIGAAYMSGVPDGNMDEAVKAVTKM 1136
Query: 1179 LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEI--LLGHQFLHRGLLLQAFVHP 1236
+ ++ A + + SAS+ A + L+G++F LL AF HP
Sbjct: 1137 VADPNHTMQCFADYYAGFSVPAWHASSGSASVRAAVDRVAGLIGYRFRSPLLLRSAFTHP 1196
Query: 1237 SFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
S+ YQ LEFLGDA+LD I +L+ +P P LT+ + + +NQ + V
Sbjct: 1197 SYKAEEIPDYQTLEFLGDALLDMAIVDHLFRAHPDAGPQWLTEHKMGVCSNQFLGYLCVS 1256
Query: 1296 QSFYKFLIFDSNVLSETINNY---VDYMITPSSTREVKEG-----------PRCPKVLGD 1341
+ ++ + I ++ + Y+ + T ++G R PKVL D
Sbjct: 1257 LGLQREVLAADAAVPGQIRSFEERLAYLKDAAETAAAQQGRPVSKGYWTLATRPPKVLAD 1316
Query: 1342 LVESSLGAILLDSGFNLNTVWKIMLSFLDP 1371
+VE+ +GA+ +D+ ++ V + +F+ P
Sbjct: 1317 VVEALIGAMFVDARYDYAVVQRFFEAFVRP 1346
>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
Length = 1495
Score = 301 bits (772), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 367/1428 (25%), Positives = 593/1428 (41%), Gaps = 238/1428 (16%)
Query: 60 RKYQLELCKKAMEENIIVYL--GTGCGKTHIAVLLIYELAHLIR---------KPQKSIC 108
R+YQ+EL + A E+N+IV L GTG GKT I++LL L + IR P+K +
Sbjct: 72 REYQIELFEAAKEKNLIVVLPTGTGSGKTLISILL---LKYYIRIEVESRALGNPRK-VA 127
Query: 109 IFLAPTVALVQQQAKVIEESI-GFKVRTFCGGSKRL-KSHCDWEKEIDQYEVLVMIPQIL 166
FL VAL +QQ + +++ I G + F G ++ + K W+ + +V+V IL
Sbjct: 128 FFLVEKVALCEQQYRFLKDQIFGHNIVMFTGDNRGVTKDKKYWDDQFSSNKVVVCTAHIL 187
Query: 167 LYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPV 225
L CL + FI M+ I LLIFDE HHA K H YA+I++ +Y + K PRI GMTASPV
Sbjct: 188 LDCLNNGFITMDQINLLIFDEAHHA--KKKHDYAQIVRRYYYSTEKNKRPRILGMTASPV 245
Query: 226 VGK-GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
K G A+ L LE LD+++ ++ S ++R V + +
Sbjct: 246 DSKAGDVAELAL-----ELEKTLDSEIATL----------SDKMMRQATDFQVHVEETVK 290
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS 344
Y T L + + Q ++S+ + ++ + S+ F E + G A
Sbjct: 291 YNTLG--LPDETKTQLWDSISKLVSRNKEFKA----------SLDFTKEASTILGPWCAD 338
Query: 345 -YILLSGDETMRNELIEAEGNTI---DDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
Y + D+T L + + L QA E + ++ A + I
Sbjct: 339 RYWQVLIDDTEIKRLADRTRMAFFGGGEKLLARGDQAEEAVREV-QKVVAAHEFRAISPQ 397
Query: 401 KEPFFSK-KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFL 458
+ +K K L I ++ F + +CIVFV++ TA LS + + + ++
Sbjct: 398 SQELSAKVKCLHEI-LVHAFTVDNTKRCIVFVDQRHTACLLSDLYDQVSMAIPGMNASYM 456
Query: 459 VGVNAG---LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+G + L +MS S L+ FR G +N L AT V EEG+DI +C LVIRFDL +V
Sbjct: 457 IGQQSSSSTLGNMSLRKQCSTLKNFRDGVINCLFATSVAEEGIDIPSCDLVIRFDLYTSV 516
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE-------------EDRMNREIM 562
++QS+GRAR S Y +++ GN R++ +K +++ + ++ ++
Sbjct: 517 IQYVQSKGRARHESSRYITMLEDGNMRQIRSLKQAARDATALREFCLRIPADRKLQDDVF 576
Query: 563 DRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D + +YK++S+GA ++ + +L R+ + L E + K +++ +
Sbjct: 577 DEETESQIKQIRFNVYKIESTGAQLTFPSSLEILARFVASLGTAESSHSKAEYHVYKVGT 636
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATED 682
+ LP+++PI G PQ S AK A + + L ++D+L P
Sbjct: 637 YFTAAVNLPSSSPIVSQTGYPQRSKLLAKCSAAFEVCKKLINGKHIDDHLQPTFKKHFHK 696
Query: 683 EPMLFSSDSDSYEGEGSRGELHEM-LVPAV--LRQSWTKSQYPVRLNFYFMQFIPDPADR 739
S + +GE H+M L P V +R WT +P R+ +
Sbjct: 697 MRNARVGISPNKKGE------HDMRLRPNVWSIRGEWTHF-FPTRIT------LDRDCGE 743
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKL------VPSGIMQAQQFQEMFLKV 793
R L +S LPG + L GRS + ++ +P +A LK+
Sbjct: 744 KNRSLILLSRSPLPGLPS---IPLFFGNGRSAIVEVTCSQEPLPITTEEAGGLTAFTLKI 800
Query: 794 ILDRSEFNSEF-----------VPLGKDDYCESSSSTFYLLLPVIFHKNSVDWK------ 836
D F+ EF PL KD S + + ++ +S++W+
Sbjct: 801 FAD--VFSKEFEATCDQFPYLLAPLAKDTNLNEISRIDWDTVNLVRDHDSLEWENAPDDF 858
Query: 837 IIRRCLSSPVFGTPG---GSVDRKSLPSHGPLQLHNGWSSESDVEN-SLVYATHKKWFYL 892
+ + P G +D+ PS + E E+ S Y + ++
Sbjct: 859 FFDKLVVDPYDGGRKLIIKGIDKSKKPSDP--------TPEGVPESRSRAYRSAEQNIKQ 910
Query: 893 VTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLE 952
+N +F K+ + D QP+++A+ L RNLL ++
Sbjct: 911 YSNSLFSKSRLTAQWRDD--------------------QPVVKAELLSLRRNLLDEFQVN 950
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
EE D L L + D+ S P+I+HR+++ L+A++ L S
Sbjct: 951 -------EEINKDCFVILEPLNVSPLPIDVVSMALKFPAIIHRIDSALIALDACELFDLS 1003
Query: 1013 FPEGAEVSAEMLLKALTTE---KCQERF------SLERLEILGDAFLKYAVGRHLFLLHD 1063
P + A M + TE K Q F + ERLE LGD+FLK A +F+L
Sbjct: 1004 IPPALALEA-MTKDSDNTEDHGKQQINFQAGMGSNYERLEFLGDSFLKMATTISIFVLKP 1062
Query: 1064 TVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETER 1123
+E R + N+NL A L YIR FD R
Sbjct: 1063 KSNECLYHVERMLLICNNNLFNTAVDCKLPEYIRSLAFD-------------------RR 1103
Query: 1124 TIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIG 1183
T + R A R L K+IADV EAL+GA A+L
Sbjct: 1104 TWYPDLTLRKGKAFKATAR-----QRLADKSIADVCEALIGA-----------AYLSSKD 1147
Query: 1184 IQVEFEASQVTNICISSKSFLPLSASLDMATLEI---------------------LLGHQ 1222
+ V+ +C +K ++ A+ ++ G+
Sbjct: 1148 DNLNMAVKAVSQMC-KAKYHTMMAYDEYYASFKVPDWQKASPNANQRRLVQKVADATGYH 1206
Query: 1223 FLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F LL AF HPS+ G YQRLEFLGDA++D I YLY +P P LT+ +
Sbjct: 1207 FKSAPLLQSAFTHPSYAYSGNVPNYQRLEFLGDALIDMTIVEYLYRNFPLADPQWLTEHK 1266
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-DYMITPSSTREVKE-------- 1331
+ +NQ + V + + L+F+++ I +YV + + + R+ E
Sbjct: 1267 MAMASNQFLGCLCVKLNLHHHLLFNTSQFISKIRDYVAELELAEETARQEAEEDGTPMRM 1326
Query: 1332 -----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
PK D +E+ +GA+ +DS F+ + V F+ P K
Sbjct: 1327 DFWLNATTPPKAYADSIEALMGAMFVDSEFDYSVVEDFFTKFIFPYFK 1374
>gi|169610828|ref|XP_001798832.1| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
gi|160702165|gb|EAT83689.2| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
Length = 1443
Score = 301 bits (771), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 358/1339 (26%), Positives = 581/1339 (43%), Gaps = 233/1339 (17%)
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY- 207
W+K V+V Q+L+ C+ H F+ + + LLIFDE HHA KSNHPYA++MKD+Y
Sbjct: 93 WDKLFAVNMVIVCTAQVLVDCMMHSFMSISRMNLLIFDEAHHA--KSNHPYARVMKDYYA 150
Query: 208 -KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSS 266
+ D K PRIF MTASPV KG SA+ ++ ++ LE LL +++ + D+ + ++
Sbjct: 151 HELDTSKRPRIFAMTASPVDVKGQSAE-HVREAARELETLLHSRIATTSDSALARNSITR 209
Query: 267 PVVRVYQYGPVINDTSSS-YVTCSEQLAEIK--REQYISALSRKLHDHQSLRNTTKQLNR 323
P V Y + N+ + + + ++ R+ +I+A KLH +L R
Sbjct: 210 PEEEVAVYTRLRNEFETPLHQKVKAKYGDVAPFRKLFITA---KLH--------ASELGR 258
Query: 324 LHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA 383
M + DE R I E + + + A+E+ A
Sbjct: 259 WASDMYWSFA---------------FADEQSRKLQIREE---LKYNRSKRDWSAAELDAQ 300
Query: 384 ICRRDGIASDLSCIEV----LKEPFFSKKLLRLIGILSTFRLQQHM-KCIVFVNRIVTAR 438
+ R + + E+ L E S K+++L L+ + + + +CIVFV + TA+
Sbjct: 301 MARLKEATAFVQQYEIGAPTLSEQDLSSKVMKLQYWLNLYYERTTLARCIVFVEKRHTAQ 360
Query: 439 ALSYILQNLKFLASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEE 496
L I ++ + C LVG+N AG +++S + L+KFR GELN L AT V EE
Sbjct: 361 LLKLIFDHIGG-PNLHCDVLVGINNRAGEENVSLRSQILTLQKFRRGELNCLFATSVAEE 419
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDR 556
GLDI C LV+RFDL T+ ++QSRGRAR S+Y ++++ N+ + + N +E+
Sbjct: 420 GLDIPQCNLVVRFDLYRTMIGYVQSRGRARHRNSKYLHMLEAENKEHTERLMNARHDENI 479
Query: 557 M---------NREIMDRTSSDA-FTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKL 603
M +R++ D A E+++ Y + SGA ++ +S+L + +
Sbjct: 480 MREFCKDLTHDRQLGDVEQEKAELIALEDKLFPSYTDEKSGAKLTYRSSLSILSHFVATY 539
Query: 604 P---HDEFFNP----KPKFYYFDD-----LGGTICHIILPANAPIHQIVGTPQSSMEAAK 651
P H+ P PK DD G +C +ILP + PI +VG S AK
Sbjct: 540 PSPDHNTMAQPTYVVNPKIS--DDPRDPQRNGFVCEVILPEHCPIISMVGQVYSRKTIAK 597
Query: 652 KDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAV 711
A K +L + LN++LLP T + + ++ E +G ++ P
Sbjct: 598 CSAAFKMCIELRRKDHLNEFLLP-----TISKYLPAMRNALLAVSEKKKGNYAMVIKPTF 652
Query: 712 LRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSV 771
+Q + P L+ + DR ++ + + P + + L R ++
Sbjct: 653 WKQD--RDTVPESLHLTIID-ADRGLDRPHQPLAMLTRRPFP-QLPSFPIYLTDCRPSNI 708
Query: 772 MTKLVPSGIMQAQQFQEMFLKVILDRSE--FNSEFVPLGKDDYCESSSSTFYLLLPVIFH 829
+++ + I + EMF + L E +N + DY S S Y +LPVI H
Sbjct: 709 VSQSLHIPISLTPELLEMFTRFTLRIFEDIYNKVY------DYDVSKMS--YWMLPVIEH 760
Query: 830 KNS-----------VDWKIIRRCLSSPVFGTPGGS-----VDRKSL-PSHGPLQLHNG-- 870
+ + +D IR+ + P + S +DR + P +G + ++
Sbjct: 761 RVASVRSMSNPQEVLDMDQIRKVYNEPFWKWSPQSRTDDLIDRYFVDPMNGGRRYYSDRL 820
Query: 871 ---WSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLK 927
+ V ++ HK + NI+ + DS + S I
Sbjct: 821 APHLKPQDPVPANVPRQNHK----FMKNIL-------DFSDSK-------WMKSRDITRW 862
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
H QP+L+ + + RN L N +ED E EL + PE L I +
Sbjct: 863 HQDQPVLQVEKIPFRRNHLAN--VEDKEKKELANLETYICPE--PLHISNLATPFVVMCY 918
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL-- 1039
+LP+I+HR E+ L+A++ +L +VS + L+ALT E +E+ +
Sbjct: 919 VLPAIIHRFESYLIALDACDVLD------LKVSPALALEALTKDSDNSEEHGEEKINFKS 972
Query: 1040 ------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL-------KL 1086
ERLE LGD FLK A +F+ +E E RR + N NL+ K+
Sbjct: 973 GMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKV 1032
Query: 1087 AARN----NLQV--YIRDQPFDPCQFFALGRRCPRICS-KETERTIHSQYDGRAPDDLNA 1139
A+ N +LQ+ Y+R F ++ G + R K+TE D LN
Sbjct: 1033 ASANGTERDLQLYKYVRTDAFSRRNWYPEGLKLLRGKGLKKTEE-----------DWLNV 1081
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVG-AFID------------DSGFKAATAFL------- 1179
H L K++ADV EA +G AF+ D KA F
Sbjct: 1082 T-------HNLGDKSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLM 1134
Query: 1180 -KWIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPS 1237
KW + + + + LD+A +E+ ++F + LL AF+HPS
Sbjct: 1135 EKWTDYYAAYTKPKYQTAGAT-------ATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPS 1187
Query: 1238 FNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
+ YQRLEFLGD++LD +L+ YP P LT+ ++ +V+N+ V +
Sbjct: 1188 QPFMWENIPSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVQI 1247
Query: 1295 DQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDS 1354
+ +++ N VDY ++ V E P+C L D++E+ + AI +DS
Sbjct: 1248 -----RDYVYEVEEAEREANGAVDYWVS------VSEPPKC---LADVIEAFVAAIFVDS 1293
Query: 1355 GFNLNTVWKIMLSFLDPIL 1373
F+ N V K L P
Sbjct: 1294 EFDFNVVQKFFDLHLKPFF 1312
>gi|218184775|gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indica Group]
Length = 1093
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 233/752 (30%), Positives = 331/752 (44%), Gaps = 129/752 (17%)
Query: 695 EGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG 754
+G R ELH L +W + LN Y + F+ D Y F L ++ L
Sbjct: 262 QGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDD 321
Query: 755 EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR-------SE 799
+ K+DL L + V T + P G +Q + FQE F I R S
Sbjct: 322 DVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSG 381
Query: 800 FNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPVFGTPGGSV 854
+F+ K + ++ + YLLLP+ I S+ W+ I C +
Sbjct: 382 AQRDFI-FKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQG 440
Query: 855 DRKSLPSHGPLQLHNGWSSE-----------SDVENSLVYATHKKWFYLVTNIVFEKNGY 903
D +P + Q +G E S +++S+V + H Y V +++
Sbjct: 441 DENVIPVNCIPQKRSGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLIL----- 495
Query: 904 SPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
D+ + D + S G KPL + +H R
Sbjct: 496 ----DTTAEDSFDEMYGSTG-------------KPLLMEKEQIHAR-------------- 524
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
+PPEL L HL
Sbjct: 525 --VPPEL----------------------------------LIHL--------------D 534
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A+TT +C E FSLERLE+LGD+ LKY VG LFL + EG+L+ RS AV N+ L
Sbjct: 535 ILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATL 594
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERT-IHSQYDGRAPDDLN 1138
K +LQ Y+RD FDP ++ A G R P C ET H +Y P +
Sbjct: 595 HKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFVV 654
Query: 1139 AEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI 1198
+ C +GH W+ KTI+D VEALVGA+ G AA ++W GI ++ + + +
Sbjct: 655 GK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKF 713
Query: 1199 SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVL 1256
++ LS D+ LE L + F +GLLL+A HPS LG CYQRLEFLGD+VL
Sbjct: 714 NASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVL 773
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D L+T +LY+ + + PG+LTDLRS LV+N+ FA V + + L S +L E I Y
Sbjct: 774 DLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEY 833
Query: 1317 V-DYMITPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
V + E + C PKVLGD++ES GA+ LD+ FN++ VW+I L P++
Sbjct: 834 VRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFLDTDFNVDMVWEIFEPLLSPLI 893
Query: 1374 KFSNLQLNPIRELLELCNSYDLDLQFPSLKKG 1405
L L P RELLELC+ L KG
Sbjct: 894 TPDKLALPPYRELLELCSHIGCFLNSKCTSKG 925
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVAL 117
R YQ+E+ + A+ N I L TG GKT +AV+L E A +R + + I +FLAPTV L
Sbjct: 28 RGYQVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHL 87
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V QQ +VI E V G S+ + D W++E+ + E++VM PQILL L H F+
Sbjct: 88 VHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLT 147
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD 210
M ++LLIFDECH A +HPYA+IMK + D
Sbjct: 148 MSAVSLLIFDECHRAC--GSHPYARIMKIYIVED 179
>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
Length = 1510
Score = 294 bits (752), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 375/1468 (25%), Positives = 603/1468 (41%), Gaps = 283/1468 (19%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYL-----------------GTGCGKTH 87
S TD P R+YQ+EL + A E+N+IV L GTG GKT
Sbjct: 61 SFAEASTDITP----REYQIELFEAAKEKNLIVVLPTGIFLSLYASTLDILIGTGSGKTL 116
Query: 88 IAVLLIYELAHLIR---------KPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFC 137
I++LL L H IR P+K + FL VAL +QQ + +++ I G K F
Sbjct: 117 ISILL---LKHYIRIEVESRALGNPRK-VAFFLVEKVALCEQQYRFLKDQIFGHKTVMFT 172
Query: 138 GGSKRL-KSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSN 196
G ++ + K W+ + +V+V ILL CL + FI M+ I LLIFDE HHA K
Sbjct: 173 GDNRGVTKDKKYWDDQFASNKVVVCTAHILLDCLNNGFITMDQINLLIFDEAHHA--KKK 230
Query: 197 HPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGK-GASAQANLPKSINSLENLLDAKVYSV 254
H YA+I++ +Y D K PRI GMTASPV K G A+ L LE LD+++ ++
Sbjct: 231 HDYAQIIRRYYYSTDKNKRPRILGMTASPVDSKAGDVAELAL-----ELEKTLDSEIATL 285
Query: 255 ED-----AEDLESFVSSPVVRVYQYGPV-INDTSSSYVTCSEQLAEIKREQYISALSRKL 308
D A D + V V +Y + I D + + + S IS L +
Sbjct: 286 SDKMMRQATDFQVHVEETV----KYSTLGIPDETKTQLWDS-----------ISKLVSRN 330
Query: 309 HDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMR------------N 356
+ ++ + TK+ + + LG A +L+ E R
Sbjct: 331 KEFKASLDFTKEASTI----------LGPWCADRYWQVLIDDTEIKRLADRTRMAFFGGG 380
Query: 357 ELIEAEGNTIDDSLCRFAS-QASEVFAAIC-RRDGIASDLSCI-EVLKEPFFSKKLLRLI 413
E + A G+ ++++ A+ F I + +++ + C+ E+L F R I
Sbjct: 381 EKLLARGDQAEEAVREVQKVVAAHEFGTISPQSQELSAKVKCLHEILVHAFTIDNTKRCI 440
Query: 414 GILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAM 473
F Q+H C+ ++ + + +++ N ++ + ++ L +MS
Sbjct: 441 ----VFVDQRHTACL--LSDLYSQVSMAIPGMNASYMIGQQ-----SSSSALGNMSLRKQ 489
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
S L+ FR G +N L AT V EEG+DI +C LVIRFDL +V ++QS+GRAR S Y
Sbjct: 490 CSTLKNFRDGMINCLFATSVAEEGIDIPSCDLVIRFDLYTSVIQYVQSKGRARHESSRYI 549
Query: 534 FLVDSGNQRELDLIKNFSKE-------------EDRMNREIMDRTSSDAFTCSEERIYKV 580
+++ GN R++ +K +++ + ++ ++ D + +YK+
Sbjct: 550 TMLEDGNMRQIRSLKQAARDATALREFCLRIPADRKLQDDVFDEETEKQIKEIRFNVYKI 609
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV 640
+S+GA ++ + +L R+ + L E + K +++ + + LP+++PI
Sbjct: 610 ESTGAQLTFPSSLEILARFVASLGTAENSHSKAEYHVYKVGTYFTAAVNLPSSSPIVSQA 669
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSR 700
G PQ S AK A + + L ++D+L P S + +GE
Sbjct: 670 GYPQRSKLLAKCSAAFEVCKKLINGKHIDDHLQPTFKKHFHKMRNARVGISPNKKGE--- 726
Query: 701 GELHEM-LVPAV--LRQSWTKSQYPVRLNFYFMQFIPDPAD-RIYREFGLFVKSLLPGEA 756
H+M L P V +R WT +P R+ D D R L +S LPG
Sbjct: 727 ---HDMRLRPNVWSIRGEWTHF-FPTRITL-------DRDDGEKNRPLILLSRSPLPGLP 775
Query: 757 EHLKVDLHLARGRSVMTKL------VPSGIMQAQQFQEMFLKVILDRSEFNSEF------ 804
+ L GRS + ++ +P +A LK+ D F+ EF
Sbjct: 776 S---IPLFFGNGRSAIVEVTCSQEPLPITTEEADGLTAFTLKIFADV--FSKEFEATCDQ 830
Query: 805 -----VPLGKDDYCESSSSTFYLLLPVIFHKNSVDWK------IIRRCLSSPVFGTPG-- 851
PL KD S + + ++ +S++W+ + + P G
Sbjct: 831 FPYLLAPLAKDTNLNEISRIDWDTVNLVRDHDSLEWENAPDDFFFDKLVVDPYDGGRKLI 890
Query: 852 -GSVDRKSLPSHGPLQLHNGWSSESDVEN-SLVYATHKKWFYLVTNIVFEKNGYSPYKDS 909
+D+ PS + E E+ S Y + ++ +N +F K+ +
Sbjct: 891 IKGIDKSKKPSDP--------TPEGVPESRSRAYRSAEQNIKQYSNSLFSKSRLTAQWRD 942
Query: 910 DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPE 969
D QP+++A+ L RNLL ++ EE +D
Sbjct: 943 D--------------------QPVVKAELLSLRRNLLDEFQVN-------EEINNDCFVI 975
Query: 970 LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT 1029
L L + D+ S P+I+HR+++ L+A++ L S P + A M +
Sbjct: 976 LEPLNVSPLPIDVVSMALKFPAIIHRIDSALIALDACELFDLSIPPALALEA-MTKDSDN 1034
Query: 1030 TE---KCQERF------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
TE K Q F + ERLE LGD+FLK A +F+L +E R + N
Sbjct: 1035 TEDHGKQQINFQAGMGSNYERLEFLGDSFLKMATTISIFVLKPKSNECLYHVERMLLICN 1094
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
+NL A L YIR FD RT + R
Sbjct: 1095 NNLFNTAVDCKLPEYIRSLAFD-------------------RRTWYPNLTLRKGKAFKTT 1135
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS 1200
R L K+IADV EAL+GA A+L + V+ +C +
Sbjct: 1136 TR-----QCLADKSIADVCEALIGA-----------AYLSSKDDNLNMAVKAVSQMC-KA 1178
Query: 1201 KSFLPLSASLDMATLEI---------------------LLGHQFLHRGLLLQAFVHPSFN 1239
K ++ A+ ++ +G+ F LL AF HPS+
Sbjct: 1179 KYHTMMAYDEYYASFKVPDWQKASPNANQRRLVQKVADAIGYHFKSAPLLQSAFTHPSYT 1238
Query: 1240 RLGGC--YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS 1297
G YQRLEFLGDA++D I YLY +P P LT+ + + +NQ + V +
Sbjct: 1239 YSGNVPNYQRLEFLGDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLN 1298
Query: 1298 FYKFLIFDSNVLSETINNYVDYMITPSST--REVKE------------GPRCPKVLGDLV 1343
+ L+F+++ I +YV + T +E KE PK D +
Sbjct: 1299 LHHHLLFNTSQFISKIRDYVAELELAEETARQEAKEDGTPMRMDFWLNATTPPKAYADSI 1358
Query: 1344 ESSLGAILLDSGFNLNTVWKIMLSFLDP 1371
E+ +GA+ +DS F+ + V F+ P
Sbjct: 1359 EALIGAMFVDSEFDYSVVEDFFTKFIFP 1386
>gi|413918888|gb|AFW58820.1| hypothetical protein ZEAMMB73_649074, partial [Zea mays]
Length = 237
Score = 293 bits (749), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 175/220 (79%), Gaps = 2/220 (0%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP+ IARKYQL+LCK+A++ENIIVYLGTGCGKTHIAVLL+YEL HLIRKP + +C+FLA
Sbjct: 19 KDPRTIARKYQLDLCKRAVDENIIVYLGTGCGKTHIAVLLMYELGHLIRKPSREVCVFLA 78
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
PT+ LV+QQA VI +S FKV+ + G K + H WEKE+ +YEVLVM PQILL+ L H
Sbjct: 79 PTIPLVRQQAMVIADSTNFKVQRYYGSGKHSRDHQAWEKEMGEYEVLVMTPQILLHNLRH 138
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
FI+M+LIALLIFDECHHAQ + HPYA+IMK+FY + K PR+FGMTASP++GKG S
Sbjct: 139 CFIRMDLIALLIFDECHHAQAQKRHPYAQIMKEFYN-NADKHPRVFGMTASPIIGKGGSN 197
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVY 272
+ K INSLE LL+AKV SV++ E LES ++SP V VY
Sbjct: 198 KLTYTKCINSLEELLNAKVCSVDNVE-LESVIASPKVEVY 236
>gi|403171947|ref|XP_003331125.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169644|gb|EFP86706.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1453
Score = 291 bits (745), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 379/1478 (25%), Positives = 609/1478 (41%), Gaps = 237/1478 (16%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ 104
S G D +I R YQ EL ++A + NII+ TG GKT +A+ LI +A + P
Sbjct: 8 STGGGLHPPDTMKIPRLYQAELLEEAKKRNIIIRADTGTGKTFVALSLITWIA--AQSPA 65
Query: 105 K----SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVL 159
I FLAPT L QQA+ I++ +V+ + G + + D W E+++ +V+
Sbjct: 66 NHDDHRIQAFLAPTRPLAHQQAEYIQKHCTLRVKAYTGDLQPELWNIDKWHSELNEVDVI 125
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVP 215
V QI + + K+E ++LLIFDE HH + NH Y +IM+ Y K +++P
Sbjct: 126 VSTAQIFYDLISKGYWKLEDVSLLIFDEAHHC--RKNHIYNQIMRSHYHRLAKDPTVRLP 183
Query: 216 RIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAE----DLESFVSSPVVRV 271
+I G+TASP +++ +D E D++S S+ ++
Sbjct: 184 KILGLTASP--------------------------IWNYKDLERADSDIKSLQSALAAQI 217
Query: 272 YQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFC 331
Y+ D C ++ Y + + QL LH S K
Sbjct: 218 YEVKTHTEDV------CQHNFKPNEKVVYFEPSPEFEKNSHPPWDQINQLLSLHASPKMI 271
Query: 332 LENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
V L L+ + +++ L N + ++ ++ I + +
Sbjct: 272 AAMESVSLELGTYAHSLAVLDWLKSLLTVGASNQVMSGRLLDPNKQKQIREIIEELEELV 331
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQ-NL 447
+ I+ + E FS K+ L IL +++ + + CIVFV R A+ L ++L+ N
Sbjct: 332 N----IDDIPETQFSSKVAVLNKILVSYKEKDNHDNFLCIVFVERRQHAQLLPFLLERNG 387
Query: 448 KFLASWRCHFLVG-----VN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ R L G VN G+K SR K++ KFR+GE NL +AT V EEGLD
Sbjct: 388 QLKGFLRPTALTGHAGGNVNDLIGIKMDSRTQNKAV-AKFRTGEYNLTIATSVAEEGLDF 446
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM--- 557
++C +VIRFDL T +IQSRGRAR +S+Y ++ +G + F+ +E+++
Sbjct: 447 RSCRVVIRFDLITTWKGYIQSRGRARARESDYIVMLPNGTTNKY---LEFTGKEEQLKAA 503
Query: 558 --NREIMDRTSSDAFTCSEERIYKVDSSGACI-SAGYGVSLLHRYCSKLPHDEFFNPKPK 614
NR + + + I ++ I + SLL+ C +P DEF
Sbjct: 504 LYNRPEDELIEEGEEEWTPQLICQLAGGKESILTYSAATSLLNDVCQLIPPDEFLPVVAP 563
Query: 615 FYYFDDLGGTI-CHIILPANAPIH----QIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
Y LG C + LP A +H G ++ + AK+ A +A + L +L LN
Sbjct: 564 QYEITWLGDNFQCQVTLPPMAALHPSQRTFTGLAMATKKDAKRSAAFEACKVLRELDVLN 623
Query: 670 DYLLPQEDNATEDEPMLFSSDSDSYEGEGSR-GELHEMLVPAVLRQSWTKSQYPVRLNFY 728
+ LPQ + + D+D E E + + E ++P V T ++ +
Sbjct: 624 QHFLPQREGKSAQ-----ICDADGREIEATPLSDQVEAIIPNVYGDFRTSTE------IW 672
Query: 729 FMQF-IPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLAR-GRSVMTKLVPSGIMQAQQF 786
+F PD + + GL A HL V L ++ +P I Q+++
Sbjct: 673 LHKFSFPDDSPDGFSTMGLLC-------ARHLTVPDGLQLFDHYTDSRPLPITIEQSKRI 725
Query: 787 Q--EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSS 844
Q + L R E S V + ++L+ P++ +DW +
Sbjct: 726 QWGQDDAPTNLQRLETFSRVVMQAAINRKAYEGKLYFLVAPLLRDTCEIDWNL------- 778
Query: 845 PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS 904
VD +P SD +SL Y + +F+
Sbjct: 779 ---------VDTPMIPL-------------SDTADSLRYQNTIAPIRHLHYRIFDT--CE 814
Query: 905 PYKDSDSSSHVDHLISSYGIHLKHPKQPLLR--AKPLFRLRNLLHNRK------------ 950
P D +S + P P +R K +F+ NL H K
Sbjct: 815 PAGDISEASPPQSV----------PACPSMRDFCKKIFKFHNLGHFYKVVYDLKEEQFQG 864
Query: 951 --------------LEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRL 996
L SES ++ + LP +LC K + + S LPS+ L
Sbjct: 865 ELVYLETTFHVLNNLSKSESTVVQPHRILLPLKLC--KGTHIPRSMWKVFSYLPSLTRLL 922
Query: 997 ENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGR 1056
+ L A L L FP +S ++ALT + + LE LGDAFLK A
Sbjct: 923 HDTLQATALFKRLD--FPT---ISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSV 977
Query: 1057 HLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI 1116
H++L H EG+++ RS +V+N+ L + A + NL I Q RR
Sbjct: 978 HVYLSHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASILSQ-------HPSTRRRQGA 1030
Query: 1117 CSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FID---DSGF 1172
+E R I K+ ++DVVEAL+GA F+ + G
Sbjct: 1031 PQREFSRKIP-------------------------KRVLSDVVEALLGAGFLTGGIELGL 1065
Query: 1173 KAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS--LDMATLEILLGHQFLHRGLLL 1230
K TA G + V NI + S + L S L LE +G+ F + LL+
Sbjct: 1066 KIGTALDLCFGGTTPWSERPV-NIGLESITHDALEPSILLKCQALEKKIGYVFKEKLLLV 1124
Query: 1231 QAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
QA H S N + CY+R E+LGDAV+D I + Y + +LT R+ +V+N +
Sbjct: 1125 QALTHRSANSFMTNCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSL 1184
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE----------VKEGPRCPKVL 1339
+A+ + + +I ++ E I P + E V P PK+L
Sbjct: 1185 GFLALKKLGLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFDP--PKIL 1242
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIM-LSFLDPILKFSNL-QLNPIRELLELCNSYDLDL 1397
D++E+ +GA+ +DSGFNL+T ++ + + F D I S L +P+ +L L + Y
Sbjct: 1243 NDVLEAIVGAVFIDSGFNLHTAYRTLDIIFEDVIPGLSRLVARDPLSTMLRLRDQY---- 1298
Query: 1398 QFPSLKKGGKFLAEAKVTGKDKD-VFISACATNLSRKE 1434
Q L++ + E + KD + + C L +E
Sbjct: 1299 QCAELRRISTTIREPNPNEEGKDPISVKVCRIELHGQE 1336
>gi|302819687|ref|XP_002991513.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
gi|300140715|gb|EFJ07435.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
Length = 850
Score = 290 bits (743), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 325/640 (50%), Gaps = 64/640 (10%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP-QSEY 532
+ +L+ F G+LNLL+AT V EEGLD+Q CC VIRFD+ +T+ S +QSRGRAR S Y
Sbjct: 27 QEVLDSFAGGKLNLLIATSVAEEGLDVQACCGVIRFDVCQTLQSHVQSRGRARNRLSSTY 86
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD----AFTCSEERIYKVDSSGACIS 588
+L+++GN +L+L E + +++ R D A + ++V+ SGAC S
Sbjct: 87 VWLLETGNVEQLNLFNQLCTSERVVEDQVIFRNYMDITREAPPEGDLEFFRVE-SGACKS 145
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSME 648
+ VS +H YC++L D ++N KPKF + D +C + P NAP+ + G + + +
Sbjct: 146 SQDSVSFIHEYCARL-GDRYYNAKPKFSFKDSF---VCTVEFPPNAPLRSVEGPLRRTEQ 201
Query: 649 AAKKDACLKAIEDLHKLGALN-DYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEML 707
AKK ACL+A L+ +G + D L P D+ E++ + ++S G R E+
Sbjct: 202 LAKKAACLQACRKLYDMGEVRPDTLCPDVDDFDEEDQSMRKNES------GKRKEIFSTA 255
Query: 708 VPAVLRQSWTKSQYPVRLNFYFMQFIPDPAD-RIYREFGLFVKSLLPGEAEHLKVDLHLA 766
P + SW ++ V+L FY + F+ +P + R Y FG V ++ E +V L +
Sbjct: 256 KPLIFEGSWVFNESEVQLQFYKICFVIEPPESRTYSNFGFLVNCVIDAEVTDSEVTL-FS 314
Query: 767 RGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSS 818
R R V ++ G +Q A+ +QE+ L +R S G + S
Sbjct: 315 RNRVVNARVHRVGPIQLDANQVKAAKAYQELLLNGAFNRLARCS-----GSPQEILWNKS 369
Query: 819 TFYLLLPVIFHKNSVDWKIIR------RCL------SSPVFGTPGGSVDRKSLPSHGPLQ 866
+LLLPV +S+DW + R L SSP+ G G + L
Sbjct: 370 QAFLLLPVHDDNDSIDWTSVHATAGVYRTLCSNFSPSSPIDGDGVGEKTHADM-----LC 424
Query: 867 LHNGWSSESDVENSLVYATHKKWFYLVTNIV--FEKNGYSPYKDSDSSSHVDHLISSYGI 924
NG+ S +++ +V H + VT ++ F P + +++D+ Y
Sbjct: 425 TANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLPKR---GFTYIDYYKDKYQR 481
Query: 925 HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGS 984
L+ P QPLL+AKP NLL R ED S + EE F +LPPELC + +
Sbjct: 482 TLRLPDQPLLKAKPTHAFHNLLI-RPKEDHGSRQ-EESFVELPPELCL--CLEIKSGLIR 537
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
SL +PS +H+ + + AI+L+ L P A +L+A+T++KC E FS E LE+
Sbjct: 538 SLYFVPSFLHQFTSTVCAIQLRSPLWPWIP------AAKILEAITSKKCHEEFSYESLEL 591
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
LGD+FLKY V + LFL++D EG+L+ RR+ +++L
Sbjct: 592 LGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSIL 631
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 42/195 (21%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+ LE LGD+ L Y++T L+ VY K GQL+ R+ + + ++ +
Sbjct: 586 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLPLI-- 643
Query: 1305 DSNVLSETINNYVDY----------MITPSS----------------------TREVKEG 1332
N E++ + + Y IT +S + VKE
Sbjct: 644 HQNASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVELDCEIRKFVQNVKEK 703
Query: 1333 PRC--------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIR 1384
P PKVLGDL+ES GAI +D+ F+L +W+++L L P++ + L+ +P+R
Sbjct: 704 PDASCFDDLSSPKVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPATLRFHPVR 763
Query: 1385 ELLELCNSYDLDLQF 1399
L+ELC + + F
Sbjct: 764 ILMELCARKGMKVSF 778
>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
Length = 1629
Score = 288 bits (736), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 382/1444 (26%), Positives = 603/1444 (41%), Gaps = 236/1444 (16%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL--AHLIR- 101
+V Q++D+ Q AR+YQ EL ++A +EN+I L TG GKT IA LLI LI
Sbjct: 81 NVKEQESDRIIDQ-AREYQEELFERAKDENVIAVLDTGSGKTLIAALLIRHFLQQELIDR 139
Query: 102 ---KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYE 157
KP K+I FL +V L QQA+ + ++ KV G SK L +W + +
Sbjct: 140 SQGKPPKTI-FFLVNSVPLANQQARFLNANLPQKVIALYGDSKVDLWRRAEWNRICAENN 198
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRI 217
V+V +L CL H ++ M I+L++FDE HH K NHPY++I++D+Y PRI
Sbjct: 199 VVVCTAPVLDQCLMHGYLNMGQISLIVFDEAHHC--KKNHPYSRIIRDYYLKWQDNRPRI 256
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV 277
FGMTASPV ++ ++ + + LE++L +K+ + D + F P + Y P
Sbjct: 257 FGMTASPV----DESRKDIKQVVADLESMLQSKIITTNDLS-VFGFAPRPADEYWIYPPP 311
Query: 278 INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV 337
+ +Y +AL +LH L + L + K +LG
Sbjct: 312 LVG------------------EYETALHAQLH---PLCGFIEDLKQHFSFSKQASRDLGA 350
Query: 338 CGALHA-SYILLSGDETMRNELIEAEGNT-----IDDSLCRFASQA-SEVFAAICRRDGI 390
A Y L + + + + + E ++ IDD+ A ++ E + I D
Sbjct: 351 WVADRVWKYALPTSEHGITAIISKLERSSTYIHAIDDAGREAALKSVREAISVIENHDFG 410
Query: 391 ASDLSCIEVLKE--PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
A C+E E P + RL S+F + + IVFV + +TA AL + + L
Sbjct: 411 A---PCLEKDNELSPKVAYLRQRLKERYSSF---PNTRAIVFVEQRLTAFALCDLFRVLD 464
Query: 449 FLASWRCHFLVGVN-AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
L + R LVG++ G+ S S + LEKFR G +NL+ AT V EEG+DI C LV+
Sbjct: 465 -LPNVRPGLLVGISQKGIDSSSWKDQEVALEKFRVGTINLIFATSVAEEGIDIPQCNLVV 523
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS 567
RFDL +T ++QSRGRARM S YA +++ G Q + +++ +D R
Sbjct: 524 RFDLYKTPIQYMQSRGRARMKGSVYAHMMEEGKQSHQSEV-DYAISQDDYIRRYCQELPP 582
Query: 568 DAFTCSEERIYKV-----------DSSGACISAGYGVSLLHRYCSKLP---------HDE 607
D R+ ++ S+G + + LL+RY L ++E
Sbjct: 583 DRLLGRGTRLRQIIARDMSCQSFKTSAGVVANYSNSLMLLNRYAESLARIGAVSAEVYEE 642
Query: 608 FFNPKPKFYYFDDLGGTICHIILPAN-----APIHQIVGTPQSSMEAAKKDA---CLKAI 659
+ + + + +ILP A + G + + AK+ A CL +
Sbjct: 643 LIDVEENMFRY--------KVILPPTDDERAAAVKGARGDARMNKVLAKRSAAFWCLVKL 694
Query: 660 EDLH----KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQS 715
H L ++ + P NA E S D YE + L P S
Sbjct: 695 RRAHLLDENLDSIFSKVKPHNLNARE----AVSDKKDIYE---------KKLKPDFWVNS 741
Query: 716 WTKS-QYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG-EAEHLKVDLHLARGRSVMT 773
S P L ++ P D L +S LP + + VD ++ + ++
Sbjct: 742 GVGSPDLPTELFITHVRLEPRTPDWTTAGILLLTRSPLPELPSFPVYVDDNVEK-HVILE 800
Query: 774 KLVPSGIMQAQQFQEM--FLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN 831
+L ++ +Q + + F + FN F P ES S +++L P +
Sbjct: 801 RLDRPVVVSPEQIEALTRFTLCGVFEDVFNKSFAP-------ESQSMSYWLAPP---GEQ 850
Query: 832 SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS-------LVYA 884
S W ++ P G ++ P+ P ++ ++N+ LV
Sbjct: 851 SGKW-TFEDVINVPELHVGGSGERQRWQPAATP---------DTTIDNARKWCNAFLVDP 900
Query: 885 THKKWFYLVTNIVFEKNGYSPYKDSDSS---SHVDHLI----SSYG---------IHLKH 928
K+ Y +IV + DS H D +I S++ H
Sbjct: 901 GSGKFHYFTRDIVPATTIWDAIPDSAKDVQKKHKDTIIEFTDSTWRKKGKDLGSLAHKYD 960
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSL 988
P QP+L+AK + RN LE E ++ P+ ++ + +S + L
Sbjct: 961 PHQPVLQAKLVMAGRNF-----LEKCPKEEQRYAMCEIAPQPLEIARVSYS--VAQICQL 1013
Query: 989 LPSIMHRLENLLVA------IELK----HLLSASFPEGAEVSAEMLLKALTTE-----KC 1033
PSI+HRLE L+ ++L+ +L +F + EM + +E +
Sbjct: 1014 WPSILHRLEAYLIVGEAFDKLDLRQIPYNLALEAFTKDINADDEMGEMGIHSELDGTAEP 1073
Query: 1034 QERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
+ ERLE +GD+ LK +F T +E + +R ++N L +A+ +
Sbjct: 1074 TSSVNYERLEFIGDSLLKMMTTITVF-NRTTCNEEGMHCKRMEMISNKRLCSVASSPEYE 1132
Query: 1094 V--YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH--HW 1149
+ YIR G R E R + GR ++ + H H
Sbjct: 1133 LYRYIR---------AGTGDRWRDTWYPEFLRQLKK---GRV-------IKLTDKHRTHA 1173
Query: 1150 LHKKTIADVVEALVGAFID-----------DSGFKAAT--------AFLKWIGIQVEFEA 1190
L KKTIADV EA +GA I D G KA T A W I ++A
Sbjct: 1174 LGKKTIADVCEATIGACIMTTQDLPTSTRFDLGIKAITKLVGHEDHAITSWREILPMYKA 1233
Query: 1191 SQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS-FNRLGGCYQRLE 1249
+ + + ++ P++ L + G++F + LL AF H S N QRLE
Sbjct: 1234 PRWS-LAMND----PVANDLARKVYHV-TGYRFKNPCLLRSAFTHSSDQNSPVPDLQRLE 1287
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDA LD++ +L+ P P LT+ + +V+N+ A +AV F + + S L
Sbjct: 1288 FLGDACLDWVCIWWLFRNNPTRGPQWLTEHKMAMVSNRFLAALAVILGFNRLISASSPAL 1347
Query: 1310 SETINNYVDYM--------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
I Y + + P V G PK L DLVES LGA+L+DSGF+ +
Sbjct: 1348 YAEIGTYAAKVLELYEQEDVKPDFWTRVTSGSAPPKALADLVESYLGAVLVDSGFDFAEI 1407
Query: 1362 WKIM 1365
K
Sbjct: 1408 EKFF 1411
>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
Length = 1524
Score = 286 bits (732), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 383/1459 (26%), Positives = 603/1459 (41%), Gaps = 255/1459 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQ--KSICIFLAPTVA 116
R+YQL+L ++A ++N I+ L TG GKT+IAVLL+ + LA + K Q K FL VA
Sbjct: 123 RQYQLDLFERAKQQNTIIVLDTGSGKTYIAVLLLRHVLALELEKQQQTKRTAFFLVDKVA 182
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
L QQ + ++ ++ + V F G ++ +W EI + V+V QILL L +K
Sbjct: 183 LCLQQHRFLQANLEYPVGKFYGDKASMR---EWASEIQENMVIVCTAQILLDLLSSGLVK 239
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
M + LL+FDE HH K NHPYA IM+D Y PRI GMTASPV K A
Sbjct: 240 MNQVNLLVFDEAHH--TKKNHPYASIMRDHYIRMKADRPRILGMTASPVDSKTRDFYA-- 295
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESF-VSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE L +K+ +V + L + RV +YGP+++ ++++ I
Sbjct: 296 --AALDLEATLCSKIATVSEEVLLAGMGRKQQIERVVEYGPLVDP--------ADEMTMI 345
Query: 296 KREQYISALSRKLHDHQSLRNTTKQLN-RLH-DSMKFCLENLGVCGALHASYILLSGDET 353
+S Q N R+H ++ ++ +G GA H + L
Sbjct: 346 SLSLSLST------------LCAPQSNFRIHLEAARYAASIIGPWGA-HQYWRQLFKSRD 392
Query: 354 MRNELIEAEGNTIDD-------SLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFS 406
+ E NT D+ + C+ Q+ + R + +D E ++ FS
Sbjct: 393 QYLTITELAANTADELNSHGSGACCQVQEQSDDDLIK-ARAKKLVTDHVRKESTED--FS 449
Query: 407 KKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFL--ASWRCHFLVG--- 460
K+ L +L F QQ +CIVFV + A LS NL L F+VG
Sbjct: 450 LKVHALHEVLHDVFECQQGTRCIVFVQKRYIAFLLSEAF-NLSVLRVPDMAAGFVVGSQP 508
Query: 461 VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
++ + +MS L++FR GE N + AT+V EEG+DI C L+IRFDL ++ +IQ
Sbjct: 509 ASSSIVNMSIKDQTEALDRFRYGETNCIFATQVAEEGIDIPECDLIIRFDLYDSAIQYIQ 568
Query: 521 SRGRARMPQSEYAFLVDSGN----------QRELDLIKNF--SKEEDRMNREIMDRTSSD 568
S+GRAR S Y +V+ N R++ ++ F S DR E
Sbjct: 569 SKGRARQVHSVYINMVERDNIHHRRRLMQAARDVHALRRFCSSLPSDRKIDEAEIDDGLL 628
Query: 569 AFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL-----PHDEFF-NPKPKFYYFDDLG 622
+ ++V +GA ++ +L ++ S + H E+ P + G
Sbjct: 629 KLRVKSQISFEVPQTGARLTFDSSRGVLAKFVSSVCGGADAHPEYIVTPT-------NTG 681
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA-IEDLH------KLGALNDYLLPQ 675
++LP + PI GTPQ S A+ A KA IE L+ L + LLP+
Sbjct: 682 KFTAIVLLPDSCPIKSSSGTPQRSKLLARGSAAFKACIELLNYKYIDGNLRSTLTRLLPR 741
Query: 676 EDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD 735
NA + S S G ++ EL W K P
Sbjct: 742 MRNAR----LALSDKKQSEYGMKAKPEL------------WAKRATSQLFVTTLSIEGPG 785
Query: 736 PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKL------VPSGIMQAQQFQEM 789
R R + + LP + L G V + L VP + +
Sbjct: 786 ATGRPSRPLCILTHAALPTMEP-----IRLWTGNDVQSTLALNQVAVPVTLTGEEVAGLA 840
Query: 790 FLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLL--LPVIFHKN------------SVDW 835
+IL FN F KD C+S S ++L +P N +DW
Sbjct: 841 KFTLIL----FNDVF---SKDFDCDSGSMPYFLAPCVPSTAATNLKETGCPWDGRTVIDW 893
Query: 836 KIIRRC-----------LSSPVFGTPGGSVD-----RKSLPSHGPLQLHNGWSSESDVEN 879
++ R L+SPV +D RK S+ ++ + + V +
Sbjct: 894 DLVNRSEVACAPTCPALLTSPVDFMDRFVIDPYDGSRKFFTSN----VNKNYQAFDPVPS 949
Query: 880 SLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPL 939
+ + +F NI N S YK S + + +QP+ A+ L
Sbjct: 950 GVPPPKSRSYFRAQRNIAQYSNSLS-YKFRQSI-------------IWNSEQPVFDAELL 995
Query: 940 FRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENL 999
RNLL + + + H F L P L I D+ + LP ++ +E+
Sbjct: 996 PLRRNLLC--EPDQGDIHSPRGCFIILEP----LAISTLPVDVVVTALALPVTIYSIESA 1049
Query: 1000 LVAIELKHLLS-ASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHL 1058
+A++ L+ A +P ++ E L K+ Q + ERLE LGDAFLK A L
Sbjct: 1050 AIAMDACGLIDLAIYP---PLALEALTKSEEDVDVQSNKNYERLEFLGDAFLKMATTISL 1106
Query: 1059 FLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICS 1118
F L +E E R + N NL A LQ Y+R + FD ++
Sbjct: 1107 FTLIPNKNEFEYHVERMILICNKNLFNHAVDRGLQEYVRSRGFDRRSWY----------- 1155
Query: 1119 KETERTIHSQYDGRAPDDLNAEVRCSKGH------HWLHKKTIADVVEALVGA--FIDDS 1170
PD + +R K H H L K+IADV EAL+GA +
Sbjct: 1156 ---------------PDLV---LRKGKKHKPVALTHRLADKSIADVCEALIGAAYMTEPE 1197
Query: 1171 GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS-ASLDMATLEIL--------LGH 1221
G A +K + V+ ++T + ++ + ++ +E+L +G+
Sbjct: 1198 GMNLA---VKAVTKMVQSRNHRMTKYSDYYEGYVQQAWQTIPPRPIEVLAADKVEGSIGY 1254
Query: 1222 QFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+F LL AF HPS+ YQRLEFLGDA+LD I +L+ YP P LT+
Sbjct: 1255 KFRSPKLLRSAFKHPSYPYEPELPNYQRLEFLGDALLDVAIVDFLFRRYPLADPQWLTEH 1314
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEG------- 1332
+ + +N F+ + V+ ++ ++ + + I +V+ + + + ++G
Sbjct: 1315 KMAMASNHFFSFLCVELGLHRHILSTGSSMMGHIAGFVEQI--EKAKLQTEDGVLQLDFW 1372
Query: 1333 ---PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL-------NP 1382
PK L D++E+ +GA+ DS ++ N+V F+ P F ++ L +P
Sbjct: 1373 LNTEHPPKALSDILEAVVGAMYEDSKYDYNSVRDFFTKFIAP--HFQDMTLYDTYAAGHP 1430
Query: 1383 IRELLEL------CNSYDL 1395
+ +L +L C S+ L
Sbjct: 1431 VTQLTKLMQDTFCCRSWRL 1449
>gi|414879098|tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 595
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 213/599 (35%), Positives = 300/599 (50%), Gaps = 41/599 (6%)
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
+TT +C E FS+ERLE+LGD+ LKYAV HLF+ EG+L+ RR + N+ L +L
Sbjct: 1 MTTLRCCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLG 60
Query: 1088 ARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERTIHSQYDGRAPDDLNAEV-- 1141
+Q YIRD FDP ++ A G R CP C +E D DD + +
Sbjct: 61 IERRIQGYIRDAAFDPRRWLAPGQLSRRPCPCECPVNSEVVTE---DIHRIDDKSIIIGK 117
Query: 1142 RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS- 1200
C KGH W+ KTI+D VEAL+GA+ + G KAA A LKW I+ E E + S+
Sbjct: 118 ACDKGHRWICSKTISDCVEALIGAYYVEGGLKAAFAVLKWFQIETEIEEELIMEALSSAS 177
Query: 1201 -KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLD 1257
+++LP +++ LE LG+ F +GLL++A H S G CYQRLEFLGDAVLD
Sbjct: 178 VRNYLPKVDVVEL--LEAKLGYTFQMKGLLIEALTHSSQQESGATYCYQRLEFLGDAVLD 235
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
LIT +L+ + G+LTDLRS VNN+ FA VAV + ++FL S L + I YV
Sbjct: 236 ILITRHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYV 295
Query: 1318 DYMITPSSTRE--VKEGP-RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
+ + + S R + GP R PKVLGD+VES GAIL+DS +L+ VW++ L PI+
Sbjct: 296 NSLESSSMDRASLLSSGPCRGPKVLGDIVESIAGAILIDSKLDLDLVWRVFKPLLSPIVT 355
Query: 1375 FSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKE 1434
NL+L REL E + + +G +A + KD + C N + +
Sbjct: 356 PENLELPRFRELNEWSDKNGYFIGIKCENRGDSTMAILNLQLKDLLLVRQGCGKN--KVD 413
Query: 1435 AIRIASQQLFSKLKAAGY-VPKTKS-LESILKSSP--KSEARLIGYDETPINVVAADDNV 1490
A A+ L L+ G +P+ S +E + K+S K ++ +T NV
Sbjct: 414 AKAHAASLLLRDLEEKGLIIPRNASRVEQLEKNSGTVKHCNNVLDVMDTQ-NVAPPRQKE 472
Query: 1491 FEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSH 1550
L + P GS D P + L R LYE C W PTF+ K E
Sbjct: 473 VAVLSTTTP--GSVLD--KPLVVKVKLSKGGPRISLYESCKKLQWPMPTFEFVKVEPSVC 528
Query: 1551 LKL-----------FTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLERE 1597
F F + + P +I G+ +A KK + + AA ML+ L+R+
Sbjct: 529 SSSCGSSQKVAPQGFAFASTITLHIPNGDVISLTGDGRADKKSSQDSAALLMLYELQRQ 587
>gi|225684422|gb|EEH22706.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1469
Score = 277 bits (709), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 354/1403 (25%), Positives = 574/1403 (40%), Gaps = 244/1403 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQLEL +KA NII L TG GKT IAVLL+ ELA R I FL +
Sbjct: 99 REYQLELFEKAKTTNIIAVLDTGSGKTLIAVLLLKHMIRIELADRARGKPPRISFFLVDS 158
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V++ +I + FCG L S W++ + ++V ++L CL H
Sbjct: 159 VTLVYQQAAVLKANIDQSIDKFCGALQTDLWSKETWKRHFSKNMIIVCTAEVLYQCLLHS 218
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYA-------------------KIMKDFY--KPDIM 212
FI+ME I LLIFDE HH K +HPYA +I+KDFY +
Sbjct: 219 FIQMEQINLLIFDEAHH--TKKDHPYARLEGSMFSAHSVSVADGIYRIVKDFYLQMTESQ 276
Query: 213 KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVY 272
P+IFGMTASPV A+ ++ ++ SLE LLD+++ + + + L V+ P + +
Sbjct: 277 HRPKIFGMTASPV-----DAKVDVVTAVKSLEMLLDSQIATASNLDALRQSVARPTEQEW 331
Query: 273 QY---GPVINDTSSSYVTCSEQLAEIK--REQYISALSRKLHDHQSLRNTTKQLNRLHDS 327
Y P + Y + Q I ++ +I +L T L R
Sbjct: 332 VYDRLDPAFE--TDLYKSMHSQFGNISVLKKMFICSL-----------EATSTLGR---- 374
Query: 328 MKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTID--DSLCRFASQASEVFAAIC 385
+C + L S L G + R + + GN D + + +A +V
Sbjct: 375 --WCSDWLWTIVLDEPSLPKLEGSIS-RRYIRTSSGNHTKGVDEMIKSLREAVKVI---- 427
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYIL 444
+ + + C E L S K+ L LS F KCIVFV + +A L +
Sbjct: 428 KDHTFYTPVDCPEHL-----SPKVRLLHHQLSKYFERHTDTKCIVFVEKRHSATLLGELF 482
Query: 445 QNLKFLASWRCHFLVGVN---AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
+L R L+GV AG + +S L KFR GELN L A + + L Q
Sbjct: 483 -SLIGTRHMRTGVLIGVRTDEAGGEKVSFRQQFWTLLKFRKGELNCLYAHMMERDNLIHQ 541
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNF--SKEEDRMNR 559
C L E Q ++++ F S EDR+ R
Sbjct: 542 RC-------LEEA--------------------------QEAENIMRQFCESLPEDRIIR 568
Query: 560 EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
D + + + V S+G+ ++ +++L Y S L ++ + + ++
Sbjct: 569 GASDELDKFLYKERCRKTFTVPSTGSKLTYNSALAVLAHYASSLQYENEMSTRVNYFIHR 628
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA 679
G +C ++LP +P+ + G P + +AK+ A + L K G L+DY L +
Sbjct: 629 IRGAFVCEVVLPEKSPVRGLTGRPAVAKLSAKQSAAFETCLMLRKNGLLDDYFLSKYHKR 688
Query: 680 TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--YPVRLNFYFMQFIPDPA 737
P++ ++ + + ++M+V L W KS+ P ++ + P
Sbjct: 689 L---PLMRNA---KLAIKSKKTNQYDMMVKPKL---WEKSRGMTPYEVHATVLTLRPSAK 739
Query: 738 -DRIYREFGLFVKSLLPGEAE---HLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKV 793
R+++ L + LP +L+ D+ V++ + + + +Q ++F
Sbjct: 740 LRRVHQPLVLLTRESLPKFPVFPLYLETDIEC----DVVSIPLRASMQVSQSELDLFTTF 795
Query: 794 ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSV----------DWKIIRRCLS 843
L F L Y + Y L P+ +V DWKII+
Sbjct: 796 TL------RIFQDLFHKVYDHQPAMMPYWLAPISLEYGNVLEDSNLRQLIDWKIIQHVQE 849
Query: 844 SPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE---SDVENSLVYATHK-KWFYLVTNIVFE 899
+P W+S+ S +EN ++ ++ Y + +
Sbjct: 850 NPEI----------------------CWTSDMPRSSLENIFMFDKWDGRYRYFTSELELN 887
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHL-KHPKQPLLRA----KPLFRLRNLLHNRKLED- 953
P + + I +Y I L K+ + L +P+ R + R L D
Sbjct: 888 LRPSDPPPPTMAKRRYMDNIMNYCISLYKNSRLKFLETCDWNQPVVRAELVRLRRNLLDR 947
Query: 954 SESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASF 1013
+ H+ EE + PE L+I + P+++ R+E+ L+A+E + L +
Sbjct: 948 TTEHKGEETAYYICPE--PLRISALPAPVAVFAFTFPAMISRIESYLIALEACNKLQLT- 1004
Query: 1014 PEGAEVSAEMLLKALT--TEKCQERFS------------LERLEILGDAFLKYAVGRHLF 1059
+ E+ L+ALT ++ +E + ERLE LGD FLK + LF
Sbjct: 1005 -----IIPELALEALTKDSDNTEEHRAEQIHFQRGMGKNYERLEFLGDCFLKMSTSISLF 1059
Query: 1060 LLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSK 1119
++ DE + +R + N NL A + ++R Q F ++ G +
Sbjct: 1060 AMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRTQGFSRRNWYPEGIKL------ 1113
Query: 1120 ETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DDSG 1171
G+A + ++ H L K+IAD+ EAL+GA + D+
Sbjct: 1114 ---------LQGKAKSE------TAENKHSLADKSIADICEALIGASLLSGGRVHRFDTA 1158
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL-SASLDMA-TLEILLGHQFLHRGLL 1229
KA TAF+ QV S V + LD+A + LG++F + LL
Sbjct: 1159 VKAVTAFVNSGNHQVSDWQSYVGLYSLPRYQIAEADDTQLDLAQQIGDRLGYRFKYPRLL 1218
Query: 1230 LQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
AF H S+ CYQRLEFLGD++LD + +LY YP P LT+ + +V+N
Sbjct: 1219 SSAFTHASYPTGWSKVPCYQRLEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKMAMVSN 1278
Query: 1287 QAFANVAVDQSFYKFLIFDSNVLSETINNYVDY--------MITPSSTREVKEGPRCPKV 1338
+ VAV ++ L++ S L I Y + + +P + P+C
Sbjct: 1279 KFLGAVAVKLGLHRHLLYFSKALLGQITRYAEEIEATETESIDSPDFWTTTSDPPKC--- 1335
Query: 1339 LGDLVESSLGAILLDSGFNLNTV 1361
L D++E+ +GAI +DS F+ V
Sbjct: 1336 LPDMLEAYIGAIFVDSNFSFEVV 1358
>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1520
Score = 273 bits (699), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 319/657 (48%), Gaps = 82/657 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI-----RKPQKSICIFLAP 113
AR YQLEL A+E+N IV LGTG GKT IAVLLI + +H I P IFL
Sbjct: 6 ARSYQLELLDSAIEKNTIVLLGTGAGKTFIAVLLIKQFSHEILDSFRDNPNSKRTIFLVT 65
Query: 114 TVALVQQQAKVIEESIGFKVRTFCG----GSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
TVALV QQA I I V T+ G + RL W E++ +LVM QI L
Sbjct: 66 TVALVTQQANYIRTHIDLNVGTYYGEMGVDAWRLTK---WNSELECNHILVMTRQIFLDM 122
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGK 228
L H FI M + L+IFDECHHA VK N PY +IMK + M P I G+TAS + GK
Sbjct: 123 LSHGFISMSRVNLIIFDECHHA-VK-NDPYVQIMKHYNDERYMCNKPHILGLTASIISGK 180
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+ L + I LE L+A+V + D ++ + ++P + YG N S
Sbjct: 181 CKPDK--LEERIRKLEATLNARVETATDLAEVAKYATNPQESLVTYGATSNQHHSELT-- 236
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFC---LENLGVCGALHASY 345
++ + IS + ++ +RL ++ C +EN+ + A+ A
Sbjct: 237 ------VRLKSVISETLKFMYQAPQSSRAGTVPSRLQCYLEECIYVMENISITSAVEAVR 290
Query: 346 ILLSGDETMRNELIEAEGNTI---DDSLCRFASQASEVFAAICRR---DGIASDLSCIEV 399
++ ET ++++ EG+ + D +LC +F++ C DG+
Sbjct: 291 LI----ETEIKDMLD-EGDAVGEWDITLCHLLLLKLSIFSSQCNELLFDGVND------- 338
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNLKFLASWRCHFL 458
P FSK L L+ + S+ Q C IVFV + +TA LS I+ +K L RC F+
Sbjct: 339 -HSPKFSKLLEILLNLRSS---QAEDFCGIVFVEQRMTAMCLSQIITEIK-LPGIRCSFI 393
Query: 459 VGVNA-----------GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
VG + G M+ + +L+KFRSG LNLL+AT V EEGLD++ C +VI
Sbjct: 394 VGHASSSGKIMEKKVSGSGGMNAKKQQEVLKKFRSGTLNLLIATSVVEEGLDVRKCNVVI 453
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDRMNREIMDRTS 566
R+D P+T S +QS+GRAR S Y L+D + + IK ++K E+ + +R S
Sbjct: 454 RYDFPKTFQSHVQSKGRARAKDSRYLVLIDQTQESKCTCDIKEYAKLEEMLASLCHNRES 513
Query: 567 SDAFTCSEERIYKVD------SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--F 618
D S + ++ + SG + +SLLHRYC KLP D++ P F
Sbjct: 514 PDEDEVSRQLMHLMKPYQPYGPSGPSLPIDSSLSLLHRYCQKLPGDQYTVMAPDFKLEPV 573
Query: 619 DD----LGGT------ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
DD L G +C + LP +P+ G + A++ A AI+DLHK+
Sbjct: 574 DDAICQLDGRRYETLFMCTVYLPTCSPVRSAQGIAVPRVNLARQSAAFIAIQDLHKV 630
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 239/532 (44%), Gaps = 118/532 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL++LT ++ F LERLE LGD+FLK AV LF EG+LTR R N ++
Sbjct: 998 SNSLLLQSLTGTSAKDSFDLERLETLGDSFLKLAVSVSLFCGRGKDHEGKLTRSRINRIS 1057
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
N NL LA + L ++ + F+P L P S + + D P+ L A
Sbjct: 1058 NFNLSFLAKKKGLPGLLQTEQFEP-----LSGWIPPGFSLSLDSALP---DHVPPNTLPA 1109
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGA------------FIDDSGFKAAT---AFLKWIGI 1184
++ +H + K IAD EAL+GA F+D G + T +F + + +
Sbjct: 1110 VIQ-KYYYHKVTDKGIADSTEALLGAYLIAGGLGAGFSFLDWLGLQKPTESSSFSQDVTM 1168
Query: 1185 ----------QVEFEASQVTNICIS-----------SKSFLP-----LSASLDMATLEIL 1218
Q + + + CI+ S LP L +S T++ L
Sbjct: 1169 SSCNVSRKQSQSSLMSIEEASPCINPILLQNSTHVFSSCCLPPPPSLLDSSAPDTTIDKL 1228
Query: 1219 LGH----------------QFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYL 1259
L F R LLLQA HPS+ NR+ YQRLEFLGDAVLDYL
Sbjct: 1229 LSSAVPGGGRSSLYDKLSWDFSDRALLLQALTHPSYSNKNRVTRSYQRLEFLGDAVLDYL 1288
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVD 1318
IT LY+ +P PGQ+T+ RS LVNN FA +AV + S + +L++ S L I YV+
Sbjct: 1289 ITCCLYTEFPSYTPGQITETRSALVNNVTFAEIAVKKLSLHTYLLYLSPSLFRKITEYVE 1348
Query: 1319 YMITPSSTREV---KEGPRC---------------------------------PKVLGDL 1342
++ RE KE C PKVLGD+
Sbjct: 1349 FL--QEDERESGSEKELIYCRFGDQSENVHEEMNGDIAMLEEEEEADITELEPPKVLGDV 1406
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDPIL---KFSNLQLNPIRELLELCNSYDLDLQF 1399
+ES GA+ LDSG +L TVW F P++ K ++PI+EL+ S ++
Sbjct: 1407 LESLAGALFLDSGMSLETVWSYFYPFFRPLIESFKEKGPPVHPIQELMRTEPSVEI---M 1463
Query: 1400 PSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
S + K KV DKD+ +S A S K A A++++ K+K G
Sbjct: 1464 QSSTRRSKHRCTIKVI--DKDIQVSCIAE--SYKTAKNGAAKRVIRKIKEIG 1511
Score = 44.3 bits (103), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 80/215 (37%), Gaps = 54/215 (25%)
Query: 1005 LKHLLSASFPEGAEVS-----------AEMLLKALT----TEKCQERFSLERLEILGDAF 1049
+ LLS++ P G S +LL+ALT + K + S +RLE LGDA
Sbjct: 1225 IDKLLSSAVPGGGRSSLYDKLSWDFSDRALLLQALTHPSYSNKNRVTRSYQRLEFLGDAV 1284
Query: 1050 LKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN-NLQVYIRDQPFDPCQFFA 1108
L Y + L+ + G++T RS VNN ++A + +L Y
Sbjct: 1285 LDYLITCCLYTEFPSYTPGQITETRSALVNNVTFAEIAVKKLSLHTY------------- 1331
Query: 1109 LGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG------HHWLH----------- 1151
L P + K TE Q D R + C G H ++
Sbjct: 1332 LLYLSPSLFRKITEYVEFLQEDERESGSEKELIYCRFGDQSENVHEEMNGDIAMLEEEEE 1391
Query: 1152 --------KKTIADVVEALVGAFIDDSGFKAATAF 1178
K + DV+E+L GA DSG T +
Sbjct: 1392 ADITELEPPKVLGDVLESLAGALFLDSGMSLETVW 1426
>gi|241896736|emb|CAZ65730.1| dicer-2 protein [Mucor circinelloides f. lusitanicus]
Length = 1608
Score = 273 bits (697), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 213/653 (32%), Positives = 306/653 (46%), Gaps = 76/653 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA------HLIRKPQKSICIFLAP 113
R+YQ EL KA+EENII L TG GKT I+++LI ++ L R+ K + FL
Sbjct: 97 REYQYELFTKALEENIIAVLDTGSGKTLISIMLIKQMVLQERQERLTRRETK-LAFFLVD 155
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA VI + + CG + S W+ ++ +V VM QI L L+H
Sbjct: 156 RVPLVFQQASVIRANCDVNLEEICGEMEVDAWSEKRWKLIFEENDVCVMTAQIFLDTLHH 215
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGAS 231
FI +E LLIFDECHHA K HP+ IM++FY + + P+IFGMTASP+
Sbjct: 216 GFISLEKAHLLIFDECHHATKK--HPFNLIMREFYDRCPLEHRPKIFGMTASPM-----H 268
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN-DTSSSYVTCSE 290
A+ + +S+ LE L A+VY+ + E L + P Y P + + E
Sbjct: 269 ARTTVERSVAQLEKNLHARVYTATNMESLNISIPKPREISIHYDPTPRYEETEMSKKIRE 328
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV-CGALHASYILLS 349
+L I R + +++ + L +LG C +L
Sbjct: 329 KLGSIGRYKRCFIITQDI-----------------------LTSLGPWCSDRMWKSMLSE 365
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
+ M N + E + + D V R+ ++ + FS K+
Sbjct: 366 LERKMTNMTQDLERDALIDEDLALKETHEYVDPIEFPRNP--------DIFDQSLFSPKV 417
Query: 410 LRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG---VNAGL 465
LI +L T CI+FV R TA+AL ++ +L L RC L G G
Sbjct: 418 AELIRLLQFTSERIPDFCCIIFVERRHTAKALQTLIASLDRLKDIRCESLTGHGSTEEGD 477
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
M+ I++KFRSGELNLL+AT V EEGLDIQ C +V RFD T+ S+IQSRGRA
Sbjct: 478 VQMTFGDQNKIIQKFRSGELNLLIATNVAEEGLDIQPCNVVFRFDFFHTLISYIQSRGRA 537
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSK-------------EEDRMNREI-----MDRTSS 567
R S++ L ++ N + D + FS+ EE + R+ +D S
Sbjct: 538 RKEGSKFIILTEANNAGQEDTLAEFSRLEADMKAFCQTMPEERNVARKYAISMDVDYDSD 597
Query: 568 DAFTCSEERIYKVDS-----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
+ + EE + D+ +GA I+ V L+H+YCS LP D F KP F
Sbjct: 598 EDYISDEEENFLADAFIVPETGATITKQNAVPLIHKYCSSLPSDSFCVLKPIFENIVTGE 657
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
G IC +ILP+NAP ++ S + A+ L A L +L AL+ +LLP+
Sbjct: 658 GYICKLILPSNAPFQEMESHVCGSKDLARASVALNACIRLRELDALDKHLLPR 710
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 160/609 (26%), Positives = 263/609 (43%), Gaps = 85/609 (13%)
Query: 805 VPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP 864
VPL K +CE+++ + L + + +DW G +DR + P
Sbjct: 960 VPLVK--HCENTA---FETLALTDFETLIDW----------------GEIDRIIESTSRP 998
Query: 865 LQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKD------SDSSSHVDHL 918
L + ++S V V + Y VTN+ + + SP D + +S D+
Sbjct: 999 FTLDDYDPTDSIV----VDQSDNMRRYFVTNVRTDMSPLSPVPDGVKIRETGYASFADYY 1054
Query: 919 ISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
+ QP+L K L ++ N L+ K ++ + P CQ +
Sbjct: 1055 NEKKFVEELDTSQPMLEVKRLKKVMNFLYPGKPSQAQMKGPMSTW--TVPSFCQRFFM-- 1110
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFS 1038
S + + ++PSIM R++++L+ + + +L+A TT +
Sbjct: 1111 SASVYQATMMIPSIMTRIDSILLCRQSAERYDLPIDDAN------MLEAYTTPSANMEMN 1164
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD+ LK+ L++ +EGEL R + N L + A R Y+
Sbjct: 1165 YERLETLGDSLLKFIATIRLYINFPFSNEGELHHLRIRVICNRALYRSAKRLKFYRYVTS 1224
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
Q F+ + G P + + TI DG +H L KT+AD+
Sbjct: 1225 QAFNRRYWRPPGFTSP----ADNQETI----DGLK-------------YHKLSDKTLADI 1263
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTN----ICISSKSFLPLSA------ 1208
VEA +GA +G + I +Q+ F+ + + S+ +P A
Sbjct: 1264 VEASLGAAYLSNGLEGG--LHAAIQLQIPFDEIKTWDDFKPTFEESRKQVPARAEVRALR 1321
Query: 1209 SLDMATLEILLGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
SLD+ + ++G +F L+++A H S N CYQRLEFLGDA+LD+++ YL++
Sbjct: 1322 SLDLPKVTEIVGREFKTPLLIVEALTHASLPNSTSPCYQRLEFLGDAILDFMVIRYLFAR 1381
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
YP PG +TDL+ VNN V ++ Y+ +I S L I +V + + R
Sbjct: 1382 YPDADPGIITDLKDSCVNNHILGIVCIETGLYRHIIHYSGKLIRAIEFFVSE-VEETKAR 1440
Query: 1328 EVKEGP-----RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF----SNL 1378
G PKVL D+VES LGA +D+GF L V ++ + PIL +
Sbjct: 1441 GEAVGEYWVDFNIPKVLSDVVESMLGATFVDAGFRLEAVEELFAKWFLPILNNHVTPELI 1500
Query: 1379 QLNPIRELL 1387
+ +P+R+L+
Sbjct: 1501 KFHPLRKLI 1509
>gi|302764440|ref|XP_002965641.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
gi|300166455|gb|EFJ33061.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
Length = 524
Score = 271 bits (693), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 287/627 (45%), Gaps = 109/627 (17%)
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQ 1034
I FS + LP + +R+E ++ AI+L+ ++ + P A +L+ALT C
Sbjct: 1 IHNFSGLVSKGTEKLPHLRNRVERMMQAIQLRKAINYNIP------ASKILEALTAANCH 54
Query: 1035 ERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
E + ER+E+LGDA+LK+AV L+L EGELT R ++NS L LA L+
Sbjct: 55 EPYCYERIELLGDAYLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLET 114
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
Y+R PF P GR P DL L K
Sbjct: 115 YVRINPFVP---------------------------GREPTDLQE----------LSSKV 137
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT 1214
+A+VVEAL+GA+ G K A ++W+GI+ F +++ S + S+D
Sbjct: 138 LANVVEALIGAYYVHHGDKGARHVVEWLGIETGFSDAELQIARAGSVVSPEVLNSIDFEG 197
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
LE LG+ F R LL QA H S + + Y+RLEF+GDAVLD+L+T ++Y Y L
Sbjct: 198 LENTLGYSFRSRNLLAQALTHSSSRQASMVPIYERLEFIGDAVLDHLLTRHIYFSYKDLH 257
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEG 1332
PG+LTDLR +N+++FA V + ++ +SN I Y + + G
Sbjct: 258 PGRLTDLRCAALNSESFARAMVKHKLHAHILHESNDFHSQIKTYAKHALNMEENAIYSYG 317
Query: 1333 ---PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLEL 1389
+ PKVLGD+ +S +GA+ +DSG NL+ VWK+ L P++ + ++P+REL EL
Sbjct: 318 FGAVKAPKVLGDVFQSLVGAVYIDSGLNLDQVWKVFEPLLQPLVTPEAVPIHPVRELYEL 377
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
C+ + L++ G FLA A V K + TN+ +K A ++A+
Sbjct: 378 CDKHLKKLEWDYSLSGDLFLARALVGNK-----VLGRGTNVQKKMAKKLAA--------- 423
Query: 1450 AGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGS 1509
IN +A D L S+ + S
Sbjct: 424 -------------------------------INAIAKLDKSASPLTPSQEEKAS------ 446
Query: 1510 PSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKII 1569
+R L+ELC+ W P ++ E G +H K+FT V IE EK
Sbjct: 447 ---------GEFSRQALHELCSQRGWPCPDYNTHSETGPAHAKMFTCTASVRIEQGEK-Q 496
Query: 1570 ECIGEPQAKKKGAAEHAAEGMLWCLER 1596
ECIG+P+ A + AA ++ L++
Sbjct: 497 ECIGQPRPTINKAKDSAARVLMETLQK 523
>gi|302815180|ref|XP_002989272.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
gi|300143015|gb|EFJ09710.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
Length = 524
Score = 270 bits (690), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 290/627 (46%), Gaps = 109/627 (17%)
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQ 1034
I FS+ + LP + +R+E ++ AI+L+ ++ + P A +L+ALT C
Sbjct: 1 IHNFSELVSKGTEKLPHLRNRVERMMQAIQLRKAINYNIP------ASKILEALTAANCH 54
Query: 1035 ERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
E + ER+E+LGDA+LK+AV L+L EGELT R ++NS L LA L+
Sbjct: 55 EPYCYERIELLGDAYLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLET 114
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
Y+R PF P GR P DL L K
Sbjct: 115 YVRINPFVP---------------------------GREPTDLQE----------LSSKV 137
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT 1214
+A+VVEAL+GA+ G K A ++W+GI+ F +++ S + S+D
Sbjct: 138 LANVVEALIGAYYVHHGDKGARHVVEWLGIETGFSDAELQIARAGSVVSPEVLNSIDFEG 197
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
LE LG+ F R LL QA H S + + Y+RLEF+GDAVLD+L+T ++Y Y L
Sbjct: 198 LENTLGYSFGSRNLLAQALTHSSSRQASMVPIYERLEFIGDAVLDHLLTRHIYFSYKDLH 257
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEG 1332
PG+LTDLR +N+++FA V + ++ +SN I Y + + G
Sbjct: 258 PGRLTDLRCAALNSESFARAMVKHKLHAHILHESNDFHSQIKTYAKHALNMEENAIYSYG 317
Query: 1333 ---PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLEL 1389
+ PKVLGD+ +S +GA+ +DSG NL+ VWK+ L P++ + ++P+REL EL
Sbjct: 318 FGAVKAPKVLGDVFQSLVGALYIDSGLNLDQVWKVFEPLLQPLVTPEAVPIHPVRELYEL 377
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
C+ + L++ G FLA A V K + TN+ +K A ++A+
Sbjct: 378 CDKHMKKLEWDYSLSGDLFLARALVGNK-----VLGRGTNVQKKMAKKLAA--------- 423
Query: 1450 AGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGS 1509
IN +A D L S+ +
Sbjct: 424 -------------------------------INAIAKLDKSASPLTPSQEEK-------- 444
Query: 1510 PSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKII 1569
T+G +R L+ELC+ W P ++ E G +H K+FT V IE EK
Sbjct: 445 ---TSGEF----SRQALHELCSQRGWPCPDYNTHSETGPAHAKMFTCTASVRIEQGEK-Q 496
Query: 1570 ECIGEPQAKKKGAAEHAAEGMLWCLER 1596
ECIG+P+ A + AA ++ L++
Sbjct: 497 ECIGQPRPTINKAKDSAARMLMETLQK 523
>gi|403171531|ref|XP_003330752.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169221|gb|EFP86333.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1403
Score = 267 bits (682), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 357/1431 (24%), Positives = 603/1431 (42%), Gaps = 221/1431 (15%)
Query: 45 SVGAQKTDKDPKQ---IARKYQLELCKKAMEENIIVYLGTGCGKTHIAV-LLIYELAHLI 100
SV A+ + D K+ I R YQ EL ++A + NII+ TG GKT +A+ L+++ A
Sbjct: 10 SVDAEDSSVDVKESLKIPRLYQAELLEEAKKRNIIIRADTGTGKTLVALHLIVWTAAQTE 69
Query: 101 RKPQ-KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEV 158
P I FL PT LV QQA+ I+ +V+ + G + D W + + +V
Sbjct: 70 SAPNGHQIQAFLVPTRPLVHQQAEYIQSQSTLRVKAYAGDLPADLWNVDKWRSGLKEVDV 129
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKV 214
+V QI + F K E I+LLIFDE HH + +H Y +IM+ Y K ++
Sbjct: 130 IVSTAQIFHDLISKGFWKFEDISLLIFDEAHHC--RKDHVYNQIMRSHYHRLAKDPAQRL 187
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQ 273
P+I G+TASP+ +A K I L+ L A++ V+ ED+ P R
Sbjct: 188 PKILGLTASPIWNYKDLERAE--KDIKDLQCSLAAQICEVKRHTEDVSQHNFKPNERAVY 245
Query: 274 YGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE 333
+ P S ++ ++L+ EQ L++ H SL+ T +S+ L
Sbjct: 246 FDP-----SPAF----QKLSHPPWEQINDLLTK----HASLKLITT-----FESVFLELG 287
Query: 334 N----LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG 389
N L + L + ++ ++ M L++ + + +Q E+ +
Sbjct: 288 NYAYSLSILDWLKSLLVVGGPNQLMSGRLLDPNHQ---QKVKQVTNQLEELLS------- 337
Query: 390 IASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ---HMKCIVFVNRIVTARALSYILQ- 445
I + E S K++ L +L ++ + CIVFV R + L +L+
Sbjct: 338 -------INDIPENQLSSKVIALNKLLVKYKEEDGRDDFLCIVFVERRQHTQLLFALLER 390
Query: 446 NLKFLASWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
N + R L G G ++ M A + KFR+GE NL +AT V EEGLD
Sbjct: 391 NTQLKGFIRPGALAGHGGGNENDLLGIKMDSRAQNKTVAKFRTGEHNLTIATSVAEEGLD 450
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR 559
++C +VIRFD T +IQSRGRAR S+Y ++ + + + FS +ED +
Sbjct: 451 FRSCRVVIRFDQITTWKGYIQSRGRARARNSDYIVMLPTDSSSKY---LAFSGKEDELKA 507
Query: 560 EIMDRTSSD-----AFTCSEERIYKV-DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
+ DR ++ A + + I ++ D + + ++ G LL+ C +P DEF
Sbjct: 508 ALYDRPDNELIGGGAVEPTPQLICRLADGNDSILTYGSAPGLLNDVCQLIPQDEFLPVLA 567
Query: 614 KFYYFDDLGGTI-CHIILPANAPI----HQIVGTPQSSMEAAKKDACLKAIEDLHKLGAL 668
Y LG + + LP A + +G S+ + AK+ A +A + L +LG L
Sbjct: 568 PEYEIMCLGESFKSQVTLPPMAALPSSQRTFMGLEMSTKKEAKRSAAFEACKVLRELGVL 627
Query: 669 NDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFY 728
N++ LP ++ T + D+D V A++ + + + +
Sbjct: 628 NEHFLPHREDKTGQ-----ARDADDQ-------------VQAIIPNVYGDFRTSQEVWLH 669
Query: 729 FMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--- 785
+ F PD + + G F+ + +E L + H R++ K+ S M Q
Sbjct: 670 EISF-PDESPAGFSTMG-FLCAQHVDISEGLHLYDHYQDSRTLPVKIKRSRRMTWAQDDL 727
Query: 786 ---------FQEMFLKVILDRSEFNSEFVPLGK---DDYCESSSSTFYL-LLPVIFHKNS 832
F + ++V ++R + + L +D CE + L+P+ H +S
Sbjct: 728 SINLQRLETFTRLVIQVAVNRKSYEGRLLFLVAPLLNDTCEIDWNLVETPLIPLSNHADS 787
Query: 833 VDWKIIRRCLSSP-------VFGT--PGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVY 883
+ ++ C P +F T P G + S P H P H G D +
Sbjct: 788 LRYQ----CTIVPIPHLHCRIFDTCEPSGDLSFASKPHHVPAGQHMG-----DFCKKISK 838
Query: 884 ATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
+ FY V Y + + K L+ + F +
Sbjct: 839 FRNLGHFYAVV---------------------------YNLKPEQFKGKLVYLQSTFEVL 871
Query: 944 NLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
+ L SES + Y LP +LCQ I + + S LPS+ L + L A
Sbjct: 872 D-----NLSKSESLLTQPYRLLLPLKLCQGSRI--PRSLWKVFSYLPSLTRLLHDALQAK 924
Query: 1004 ELKHLL---SASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
L L + S P G + ALT + + LE +GDAFLK A H+++
Sbjct: 925 FLFKRLDFPAISLPHG--------IHALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYI 976
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKE 1120
H EG+++ R+ +++N+ L + A + NL I Q F +F ++E
Sbjct: 977 SHLRKGEGDMSHVRARSIDNAYLRRKAVQANLPGSILSQRFRTGKFRDAQ-------TEE 1029
Query: 1121 TERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID----DSGFKAAT 1176
+ + + + P ++ ++DVVEAL+GA + + G K T
Sbjct: 1030 GKELANGNFSRKIP-----------------RRVLSDVVEALLGAGLLTGGIELGLKVGT 1072
Query: 1177 AF-LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVH 1235
A L + GI + + + + L S L +E + + F + L+QA H
Sbjct: 1073 ALDLCFGGISPWSQRTLTISFGKDAHDKLDPSMLLTCEQIERKINYVFKEKLFLVQALTH 1132
Query: 1236 PSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
S N L CY+R E+LGDAV+D I + Y + +L+ R+ + N + +A+
Sbjct: 1133 RSANSFLTNCYEREEWLGDAVIDMWIVEHAYKRFDNATADELSLARAKVACNGSLGFLAI 1192
Query: 1295 DQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTRE---------VKEGPRCPKVLGDLVE 1344
+ ++F++ S+ + ++ + + E V P PK+L D +E
Sbjct: 1193 KKLGLHEFIMHKSDNFHQACAEAIEAIEPFTKISEFFSNINNLFVVFDP--PKILNDALE 1250
Query: 1345 SSLGAILLDSGFNLNTVWKIM-LSFLDPILKFSNLQL-NPIRELLELCNSY 1393
+ +GA+ +DSG NL T ++++ + F D S L +P+ LL L + Y
Sbjct: 1251 AIVGAVFVDSGLNLPTAYRVLDVIFEDVTPSLSRLAARDPVSTLLRLRDRY 1301
>gi|302772092|ref|XP_002969464.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
gi|300162940|gb|EFJ29552.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
Length = 1255
Score = 266 bits (681), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 242/444 (54%), Gaps = 35/444 (7%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A T+ +CQ+ FS E LE+LGD+ LKYAV R L+LLH T+ EGEL+ RRS+A+ NS L
Sbjct: 815 ILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNSTL 874
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG--RRCPRICSKETERTIHSQYDGRAPDDLNAEV 1141
KLA +L +Y+RD+PF P + G R+ R C + + + P D V
Sbjct: 875 RKLAVAQDLPMYVRDEPFYPSYWVGAGMYRQRSRKCCCRLDNLVTKESSKPRPTDATYYV 934
Query: 1142 --RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICIS 1199
C +GH W+ KT +D +EAL+GA+ GF A F+K + + V+F++ I S
Sbjct: 935 GKTCGQGHRWMCSKTTSDALEALIGAYTVGGGFDGALEFMKALQVDVDFDSGL---IAAS 991
Query: 1200 SKSFLPLSASL----DMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAV 1255
+PL A + +LE L + F ++ LLL+A H S CYQRLEF+GDAV
Sbjct: 992 QHRPVPLDAVQFHMPALLSLEKELCYTFQNKALLLEAITHASTPDTVFCYQRLEFIGDAV 1051
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
LD+L+T +L++ +P L PG L+DLRS VNN A VAV + +L S L IN+
Sbjct: 1052 LDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAELRAKINS 1111
Query: 1316 YVDYMITPSSTREVKEGPRC-----------PKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
++D + P C PK L D+VES GAIL+DSGF+ +W +
Sbjct: 1112 FLDVL---------DRDPECSVMFGFKALSGPKALADIVESVAGAILVDSGFDFEKLWVV 1162
Query: 1365 MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS 1424
+ L P + + L +P+RE ELC+ + ++ G A A++ K + +
Sbjct: 1163 LKRLLSPFVTPATLSFHPVREFHELCSYKSWEFEWVQSSSG----ATAEILLKAGEQRFT 1218
Query: 1425 ACATNLSRKEAIRIASQQLFSKLK 1448
++ ++K+A + +++L + LK
Sbjct: 1219 EVSSIKNKKDARKDVAEKLLTMLK 1242
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 232/500 (46%), Gaps = 59/500 (11%)
Query: 460 GVNAGLKSMSRNAMKSILEKFRSGE---------------LNLLVATKVGEEGLDIQTCC 504
VN+GL + A+ IL ++R+ E LN+L+ T V EEGLD+Q+C
Sbjct: 298 AVNSGLLTSKVKALLKILVRYRNVEPFRCMIFVERVVVTQLNVLICTSVAEEGLDVQSCN 357
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR 564
V+RFD+ T+ SFIQSRGRAR + Y FL++ GN + L+ E+ M E + R
Sbjct: 358 CVVRFDICRTLRSFIQSRGRARKRDATYMFLLERGNLEQESLLMELVNSEELMRAEALSR 417
Query: 565 TSSDAFTCSEERIYKVD------SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
S T + D +SGACIS VS ++RYCS+LP D ++NPKP+
Sbjct: 418 MSK---TIEITPLIDADLDFFYTTSGACISTDGAVSFIYRYCSQLPGDRYYNPKPEIEVT 474
Query: 619 ----DDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
D+ C I P NAP+H + G P+ + + AKK ACL+A L LGAL + P
Sbjct: 475 KCESDNEELFSCTITFPPNAPLHVLTGPPKRNKQLAKKVACLEACRQLDALGALGERHPP 534
Query: 675 Q--EDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF 732
+ E+ + P L G EL + ++ W + + L+ Y + F
Sbjct: 535 EVREEKMASEGPGL---------GSTKLKELFPSIKSTTYQRQWITTSTDIILHIYALIF 585
Query: 733 IPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG--------IMQAQ 784
P+ Y FGL + L + +++V+L+L + R+V KL +G + A+
Sbjct: 586 HPEENGSTYTNFGLLFDAALDDDVGNIEVNLYLTKNRAVKAKLSSAGQRRVDSVQLAAAK 645
Query: 785 QFQEMFLKVILDRSEFNSE-------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKI 837
+QE+ R F + L + S YLLLP++ +DW I
Sbjct: 646 AYQEIMFNGAFSRLVFREDKNDRTLATCLLSSTEKANELWSETYLLLPILDGSCDIDWNI 705
Query: 838 IRRCL-SSPVFGTPGGSVDRKSL----PSHGPLQLHNGWSSESDVENSLVYATHKKWFYL 892
+ RC ++ + + +++ + P G + +G S +++++V H +
Sbjct: 706 VTRCADAAKLLPSLCSELNKTEVCMERPDAGLIYTASGPVSPGALQDAVVLTVHTGKLFS 765
Query: 893 VTNIVFEKNGYSPYKDSDSS 912
+ ++ + S +K+++ S
Sbjct: 766 IVEVLEDLGAQSTFKENEES 785
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPTVALVQQ 120
YQLE+ +K ++EN IV+L TG GKTHIA +L +LA + P+ K I +FL PTVAL Q
Sbjct: 2 YQLEVLEKVLKENTIVFLETGAGKTHIAAMLFNKLADRLSMPEEKRIGVFLTPTVALADQ 61
Query: 121 QAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
QA VI S KV + GG W +EID ++VLVM Q+L L I+ME+I
Sbjct: 62 QANVISSSTRLKVGVYHGGQMDTWDVRKWSEEIDSHQVLVMTAQVLFNSLQLSAIRMEMI 121
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDF 206
+LIFDECH AQ +NHPYA +MK +
Sbjct: 122 EVLIFDECHRAQ--NNHPYASVMKIY 145
>gi|189205613|ref|XP_001939141.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975234|gb|EDU41860.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1572
Score = 261 bits (667), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 219/661 (33%), Positives = 322/661 (48%), Gaps = 85/661 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQ EL ++A EN+I L TG GKTHIA LL+ EL H + + FL +
Sbjct: 118 RDYQTELFQRAKVENVIAVLDTGSGKTHIATLLLRHVLDAELEHRAKGDAPKMAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ+ V+ + V CG L S W+ D V+V ++L+ C+ H
Sbjct: 178 VNLVFQQSNVLRCGLDQNVEGICGSMGASLWSRKTWQTYFDTNMVVVCTAEVLVQCMMHS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI M I LLIFDE HHA KSNHPYA++MKD+Y + D+ K PRIFGMTASPV KG S
Sbjct: 238 FITMSQINLLIFDEAHHA--KSNHPYARLMKDYYTHELDLSKRPRIFGMTASPVDTKGLS 295
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A ++ ++ + LE LL AK+ + ++ + +S P ++ + Y ++
Sbjct: 296 AD-HIKQAASDLEKLLYAKIATTTESTLASNSISRP-----------DEEVAVYTRLQDE 343
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL--ENLGVCGALHASYILLS 349
E Q I A K D S + KF + ++ GV AS + S
Sbjct: 344 F-ETPLHQKIKA---KFGDLPSFK-------------KFFVASKHHGVELGRWASDMYWS 386
Query: 350 ---GDETMRN----ELIEAEGNTIDDSLCRFASQASEVFAA---ICRRDGIASDLSCIEV 399
DE R E ++ +DD + ++ ++ + A + + D LS +V
Sbjct: 387 FAFADEQSRKFQERERLKHNRANVDDDVQKWDAKLKRLQEAAEFVQQFDFGKCTLSDKDV 446
Query: 400 LKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
S K+L+L L + +CIVFV + TAR L I +L ++ RC L
Sbjct: 447 ------SSKVLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGG-SNLRCSVL 499
Query: 459 VGVNAGLKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VGVN + + + IL KFR GELN L AT V EEGLDI C LV+RFDL T+
Sbjct: 500 VGVNNRISEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMI 559
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREI--MDRT 565
+++QSRGRAR S+Y +++ GN + I + ++E M +R+I D+
Sbjct: 560 AYVQSRGRARHRNSKYLHMLEDGNHDHRERIMDVKQDEQVMRNFCRDLPQDRQINEFDKD 619
Query: 566 SSDAFTCSEERIYK--VDSSGACISAGYGVSLLHRYCSKLPH-DEFFNPKPKFYYFDDLG 622
+D T E++++ V GA +S +S+L+ + + LP D +P + ++
Sbjct: 620 GTDLLTF-EDKLFPTFVTKPGAKLSYRSSLSILNHFVATLPGPDRQTMLQPTYVISSEVQ 678
Query: 623 ---------GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
G +C +ILP +P+ I+G Q AK A K L+K G L+D LL
Sbjct: 679 RNVLDPQRRGFVCEVILPEYSPVTSIIGDVQGKKTIAKCSAAFKTCLQLYKKGYLDDNLL 738
Query: 674 P 674
P
Sbjct: 739 P 739
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 219/520 (42%), Gaps = 113/520 (21%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSS 985
+P QP+L + + RN H ++ED E EL DDL +C L I +
Sbjct: 982 NPSQPVLEVEKIPFRRN--HLARVEDKEKGEL----DDLKTYVCPEPLLISNLATPFVVM 1035
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL 1039
+LP+I+HR E+ L+A++ +L +VS + L+ALT E +E+ +
Sbjct: 1036 CYVLPAIIHRFESYLIALDACGVLDL------KVSPALALEALTKDSENSEEHGEEKINF 1089
Query: 1040 --------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
ERLE LGD FLK A +F+ +E E RR + N NLL+ A
Sbjct: 1090 KSGMGPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKK 1149
Query: 1092 -------------LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLN 1138
L YIR F ++ G + R G+ +
Sbjct: 1150 KVTSVDGTERDIKLYNYIRTDSFSRRTWYPDGMKLLR---------------GKGVN--K 1192
Query: 1139 AEVRCSKGHHWLHKKTIADVVEALVGAFID-------------DSGFKAATAFL------ 1179
+E K H L K+IADV EA +GA D KA F
Sbjct: 1193 SEDDWLKLTHNLGDKSIADVCEAFIGAAFQEHYKGGRWNAADWDETVKAVKLFANSPDHE 1252
Query: 1180 --KWIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHP 1236
KW + A Q+ I+ + +A LDMA +E + F + LL AF HP
Sbjct: 1253 MSKWTDY---YAAYQMPKYQIADAT----AAMLDMACKIEAKHPYHFKYPRLLRSAFAHP 1305
Query: 1237 SFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA 1293
S+ + YQRLEFLGD++LD ++LY YP P LT+ ++ +V+N+ V
Sbjct: 1306 SYPYIYENIPNYQRLEFLGDSLLDMAFITHLYYKYPDKDPQWLTEHKTPMVSNKFLGAVC 1365
Query: 1294 VDQSFYKFLIFDSNVLSETINNY--------------VDYMITPSSTREVKEGPRCPKVL 1339
V ++ ++ ++ +L+ I +Y VDY +T + E P+C L
Sbjct: 1366 VKLGWHVYIKQNTAILTSQIRDYVLEAQEAEREASSAVDYWVT------ISEPPKC---L 1416
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ 1379
D++E+ AI +D+ F+ + V L P + L+
Sbjct: 1417 ADVIEAYTAAIFVDAEFDFSVVQDFFNMHLKPFFEDMTLE 1456
>gi|406034947|emb|CCF23094.1| Dicer 2 [Blattella germanica]
Length = 1649
Score = 259 bits (663), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 273/1061 (25%), Positives = 468/1061 (44%), Gaps = 168/1061 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQ L +A + N I+YL TG GKT+IAV+LI EL+ + + + F+ TVALV
Sbjct: 12 ARPYQEVLMNQAKKRNSIIYLPTGSGKTYIAVMLIKELSGALELGKHTF--FMVNTVALV 69
Query: 119 QQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQA+ I+ + V + G + + WE+E+++++++VM QI + L +K+
Sbjct: 70 NQQAEYIKRHTHYSVGEYSGDMNVDFWTRDKWEQELNKHQIMVMTCQIFVDILSFGVVKL 129
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
+ + LLIFDECHHA ++ P ++M+ F + I + PR+ G+TA+ ++ K SA +
Sbjct: 130 QNVNLLIFDECHHAV--NDQPMRQVMQHFERCPIQQQPRVLGLTAT-LLNKNCSA-VKVA 185
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI-- 295
+ LE + V + E+ +++ F ++P+ + S V EQ A
Sbjct: 186 NEVKKLETTFQSTVATCENMDEVCFFATNPIELTVTFK-----EGCSTVGHIEQQARNWL 240
Query: 296 -KREQYISALS----------------RKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC 338
K Q+I+ ++ + L D S K+L L + F ++ LG+
Sbjct: 241 NKTIQFINDIAFENKKVCSPGHAPANLKVLDD--SCNKENKKLRNLLTDVIFHIDTLGMF 298
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
G A + E +R + + + ++ + ++F + SD +
Sbjct: 299 GGSRACLAHIIQVERLRRKSEDMLTKQVYTAMITTLTAVRKLF------EDEMSDCTLGT 352
Query: 399 VLKEPFFSKKLLRLIGILSTF--------------------RLQQHMKCIVFVNRIVTAR 438
++ + S K+L LI I+ + R ++ +VFV R TA+
Sbjct: 353 QIRN-YSSYKVLTLIEIIKKYVPPDIAISPEDADCNTDSLQRKKEKFCTLVFVERRFTAK 411
Query: 439 ALSYILQNL-KFLASWR---CHFLVGVNAGL------KSMSRNAMKSILEKFRSGELNLL 488
+ +IL+ L K A ++ F+VG N ++ RN L +F++GE NLL
Sbjct: 412 VVYWILEELCKVDADFQHISPDFIVGFNYNPFNDTREGALQRNWCYDCLNRFQTGEKNLL 471
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
VA+ V EEG+DIQ C LV++FDLP S++QS+GRAR S Y +V S + + +
Sbjct: 472 VASNVLEEGMDIQKCNLVVKFDLPLNYRSYVQSKGRARHRTSHYILMVPSSDNTFMSKYE 531
Query: 549 NFSKEEDRMNREIMDRTSSD--------AFTCSEERIYKVDSSGACISAGYGVSLLHRYC 600
+ E + R ++ RT A T ++ + +S + ++ + LLHRYC
Sbjct: 532 EYKATEKAIERLLVGRTEEREGPSEELIAKTLYDQLVPPYRTSKSSVNLVSAIPLLHRYC 591
Query: 601 SKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAI 659
+ LP D+F P +Y + IC + LP N+P+ +++ G + + +K+ A L+A
Sbjct: 592 NMLPQDKFTVLAPIWYMAETTKPKIC-LQLPMNSPLTELIEGQEMDNRKLSKRSAALEAC 650
Query: 660 EDLHKLGALNDYLLPQ-EDNATEDEPMLFS---SDSDSYE------GEGSRGELHEMLVP 709
+ LH++G L D LLP ++A D LF D ++ E G +R + + + P
Sbjct: 651 KRLHQMGELTDSLLPTGRESAVLDSSDLFPLYVEDDETEELDTAPRGSKNRKQYYPIQFP 710
Query: 710 AVLRQSWTKSQYPVRLNFYFMQFI-PDPADRIYR-----------EFGLFVKSLLPGEAE 757
L K L+ M+ + P D + F + +P E
Sbjct: 711 DFLSNCRPKPNVDSFLHVIVMEPVYSKPTDNNRKLVFYNLLDSVESFAILSSKPMP---E 767
Query: 758 HLKVDLHLARGRSVM--------TKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGK 809
+++ G ++ +L + + F M + IL + F+ + K
Sbjct: 768 ICDFPIYMNVGELIVHVQQNDKFYRLTEEEVASLEVFNIMIFRQIL---KLMKPFMIIDK 824
Query: 810 DDYCESSSSTFYLLLPVIFHKNSV---DWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQ 866
++ S Y ++P N V DW ++R SHG L
Sbjct: 825 ENLENS-----YFMVPTRIDSNGVHEIDWDVVR---------------------SHGTLP 858
Query: 867 L---------HNGWSSESDVENSLVY----ATHKKWFYLVTNIVFEKNGYSPYKDSDSSS 913
+N SE ++V +T Y+VT I SP+ +D +S
Sbjct: 859 EVVEPTEEERNNLVISEELFGKTVVVPWYRSTQPDQNYIVTQIT-SLTPSSPFPSNDYTS 917
Query: 914 HVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES------HELEEYF-DDL 966
+ D+ Y + + QPLL K + N L R + S S HEL+E F ++L
Sbjct: 918 YADYYDKKYKLEIVKVDQPLLEVKAISNKINCLRPRGNKVSHSTSKRKRHELQEDFEENL 977
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH 1007
ELC F + + LP+I+HR+ ++L+A EL+
Sbjct: 978 IGELCMR--FQFPSVLWLKATCLPTILHRINHILLAEELRQ 1016
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 210/446 (47%), Gaps = 86/446 (19%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
PE EV ++ALT+ + F+LERLE LGD+FLK +L++ + +DEG+LT+
Sbjct: 1158 PELREV-----VQALTSASSNDIFNLERLETLGDSFLKLMASLYLYMHYLRLDEGKLTQV 1212
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC-SKETERTIHSQ---- 1128
+ + N NL L Y++ F P + P IC +E ++ + +
Sbjct: 1213 KGKLIGNRNLYYCGINQKLGGYMKVHDFVPTSDWI----APGICVDREIQQLMRAMNVSP 1268
Query: 1129 ---YDGRAPDD-------------------LNAEVRCSKGHHWLHK---------KTIAD 1157
Y+ P + +A V S H + KTIAD
Sbjct: 1269 NFLYELVLPPNEQMSGVLSENTKEIIRQKLTDANVDKSGIHSSMENFLAVRAVADKTIAD 1328
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM----- 1212
VEAL+GA++ SG + A L W+ I + + + ++ P +A + M
Sbjct: 1329 GVEALIGAYLKGSGIRGALRLLTWLKI---LPSEALPGALLDTQ---PPTADVKMRDHNQ 1382
Query: 1213 -------------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+E +L + F R LLQA H S+ NR+ CYQRLEFLGDA+LD
Sbjct: 1383 PGDIYVLLSIHECMAIENILQYTFKDRSYLLQALTHASYTPNRVTECYQRLEFLGDAILD 1442
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LIT ++Y +L PG+LTDLRS LVNN FA++ V F+KF+ + S L + ++ +V
Sbjct: 1443 FLITCHIYESCGELTPGELTDLRSSLVNNVTFASLTVRYGFHKFMKYTSTRLMDMVDRFV 1502
Query: 1318 DY-------------MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
+ ++ + + E PKVLGDL ES GAI LDSG NL VW++
Sbjct: 1503 KFQEDNGHSINEEVLILLEETETNIAEAIDVPKVLGDLFESIAGAIYLDSGMNLKEVWRV 1562
Query: 1365 MLSFL-DPILKFSN-LQLNPIRELLE 1388
+ I FS + P+R L E
Sbjct: 1563 YYRLMRKEIRTFSKEVPKQPVRLLYE 1588
>gi|313236326|emb|CBY11646.1| unnamed protein product [Oikopleura dioica]
Length = 1519
Score = 250 bits (639), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 285/1038 (27%), Positives = 451/1038 (43%), Gaps = 199/1038 (19%)
Query: 477 LEKFRSGELNLLVATKVGE----EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE- 531
L KFR+ E N+L+A E DI C LV+RFD P S+++ G R+ +
Sbjct: 490 LHKFRTREANILIAQAETENEAHRHFDIPKCNLVVRFDAP---GSYLRYDGGKRLLSQQN 546
Query: 532 ---YAFLVDSGNQREL-DLIKNFSKEEDRM-NREIMDRTSSDAFTCSE-------ERIYK 579
Y L++ + + +++ F E+ + NR + + A C + E + K
Sbjct: 547 DALYGILINKKEKIQFCRMLEEFKMLEEYLKNRASLAEEAGPAELCLDLDVTHLFEDMPK 606
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIHQ 638
+ +S +SLL++YC++LP D F G ++LP N+ +
Sbjct: 607 MRPQ-IKLSMQNSLSLLNKYCNRLPCDSFTQLSVLRKTLQLANGKFQTSLVLPNNSHLRG 665
Query: 639 IV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS------ 691
IV G P+ + E +K+ A L+A L LG L+D+L +++ E + F D
Sbjct: 666 IVVGHPKETAELSKRSAALEACTKLRILGELDDFLF---NSSKEMDKYKFEIDPFPNPLS 722
Query: 692 ------DSYEGEGSRGELHEMLVPAVLR------QSWTKSQYPVRLNFYFMQFIPDPADR 739
EG R + + +P LR ++ S PV P+
Sbjct: 723 RKRKPPPGMEGGPKRRQKYPRHIPRSLRAKPKDSKAEGASALPV----------PEKECY 772
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE 799
+YR +F + + E H +V + +++ S F + ++ ++ R E
Sbjct: 773 VYR-ISMFYRHGVNLEPIHQQVCFS-----ATQLEIIKS-------FHQYIIQDVI-RIE 818
Query: 800 FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN---SVDWKIIRRCLSSPVFGTPGGSVDR 856
P G + S YL+ PV +DW + ++ V +R
Sbjct: 819 -----RPGGVVQFNPDKSPVPYLIAPVDCDNGIEWEIDWDYLTESIAGRVLAKEAAEAER 873
Query: 857 K--SLPSHGPLQLHNGWSSESDVENSLVYATHKKW-------FYLVTNIVFEKNGYSPYK 907
+ + P H +S+ E+S+V ++++ FY V I ++ + SP+
Sbjct: 874 RVNTYSEDDPFIFH-----KSEYEDSVVICSYRRHDAPTQNRFY-VAEIQYDMDPDSPFP 927
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLL-------HNRKLEDSESHELE 960
D S + + + + L + KQPLL NLL R L S +
Sbjct: 928 ADDYESFRQYYMQRWALCLTNEKQPLLDVDHTDCRLNLLTPRFVTQKGRALPASALEKKR 987
Query: 961 EYFDD------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFP 1014
+ ++D L PE+ L + S + LPSI+HR+ LL A +L+ +S
Sbjct: 988 QKYEDKANRQYLIPEI--LDVHPVSASLWRKAVCLPSILHRITCLLAAEDLRRRISR--- 1042
Query: 1015 EGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
+ + +L+ LT K + F+LERLE+LGD FLKY+V +L+ ++ EG+L+ R
Sbjct: 1043 ---QTRVDQILQTLTLSKSSDGFNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFR 1099
Query: 1075 SNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCP-----RICSKETERTIHSQY 1129
S V+N NL +L N++ + + F Q G P + + + I++ Y
Sbjct: 1100 SKKVSNRNLFRLGVYNDIPGRMVAEQF--MQNDTGGNWLPPGYFNKDHAALEKPLIYNHY 1157
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--- 1186
+L K+IAD +EAL+GA++ +G +A FL ++G+ V
Sbjct: 1158 ----------------SDQYLTDKSIADCMEALIGAYLKATGIEATQQFLCYMGLIVLPS 1201
Query: 1187 ---EFEASQVTNI---------------CISSKSFLPLSASLDMAT-----LEILLGHQF 1223
E E + C + L A LD T E +G+ F
Sbjct: 1202 SSCEPETGKPLPPFLLLAPPIEPFHLKSCTQLEKMQRLQA-LDKLTRTYGEFEKKIGYTF 1260
Query: 1224 LHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYP--KLKPGQLTDL 1279
++G LLQ+ H S+ N++ CYQRLEFLGDAVLD+LIT +L+ +P + PG+LTDL
Sbjct: 1261 KNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLDFLITRHLFD-HPTKRFSPGELTDL 1319
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRC---- 1335
R+ LVNN FA +AV F+K+L + L I +YV Y TR+ EG
Sbjct: 1320 RAALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRDYVLY----CQTRQDVEGMEAVLKR 1375
Query: 1336 ----------------------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-I 1372
PKVLGD+ ES GAI LDSG NL+ VW + L I
Sbjct: 1376 IRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVAGAIYLDSGMNLDAVWGVYRPMLQKYI 1435
Query: 1373 LKFS-NLQLNPIRELLEL 1389
K+S N +PIRELLEL
Sbjct: 1436 DKYSINPPRSPIRELLEL 1453
>gi|440632076|gb|ELR01995.1| hypothetical protein GMDG_05164 [Geomyces destructans 20631-21]
Length = 1634
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 316/671 (47%), Gaps = 93/671 (13%)
Query: 47 GAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIR 101
G+Q+ P R+YQ+EL +KA +N I L TG GKT IA LL+ EL
Sbjct: 166 GSQEIISSP----REYQIELFEKAKTQNTIAVLDTGSGKTLIAALLLRHVIDEELERREN 221
Query: 102 KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLV 160
K I FL +VALV QQ V++ ++ K+ FCG L S WEK ++ V+V
Sbjct: 222 GGDKRIAFFLVDSVALVFQQYAVLKCNLNHKMEQFCGDMGCDLWSKELWEKHFNENMVIV 281
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIF 218
++L CL+H FI M+ I LLIFDE HHA K NH YA+I+KDFY +PD VPRIF
Sbjct: 282 CTAEVLFQCLHHSFITMKQINLLIFDEAHHA--KRNHAYARIIKDFYASEPDQSLVPRIF 339
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVI 278
GMTASPV DA+ A +LE+ + S +
Sbjct: 340 GMTASPV----------------------DARTNIKRGAAELEALLHSQIA-------TA 370
Query: 279 NDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC 338
+D S T + E+ Y +AL K++N+L +K C + L
Sbjct: 371 SDASLLQYTNKKTKEEVA---YYNALPPSTESQ-----LFKKVNQLVGGIKECSKPLEYA 422
Query: 339 -------GALHASYILL---SGDETMRNELIEAEGN-----TIDD-SLCRFASQASEVFA 382
G+ A +LL +G++ R E + E N ID L ++ ++ +
Sbjct: 423 VTASSDLGSWIADRVLLISFTGEDVKRLE-AKIESNFHKQAQIDPIPLSNLENRKEKLQS 481
Query: 383 AICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALS 441
A + I + + L S K+L L L F KCIVFV + TA+ L+
Sbjct: 482 A---QQIIMAHVFASPQLSRSQLSSKVLALASKLRERFERTTFDKCIVFVKQRYTAKLLA 538
Query: 442 YILQNLKF-LASWRCHFLVGV----NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEE 496
+ + R L G A L++ RN + + L +FR GE+N L AT V EE
Sbjct: 539 DLFARPQIGTPHLRVGSLTGTRNRNGADLEASFRNQVIT-LRRFRQGEINCLFATSVAEE 597
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDR 556
GLDI C LVIRFDL TV +IQSRGRAR S Y ++ G++ E L++ + E+
Sbjct: 598 GLDIPDCNLVIRFDLYSTVIQYIQSRGRARQDNSVYFHFIERGSKVEDALVREVRRNENI 657
Query: 557 MNREIM----DRTSS------DAFTCSEE---RIYKVDSSGACISAGYGVSLLHRYCSKL 603
+ DR S D F E R Y S+GA ++ +S+L + + L
Sbjct: 658 LKEFCQALPEDRLLSGNNYNMDYFLAKERNIMRTYTEPSTGAKLTYRMSLSVLANFVASL 717
Query: 604 PHDEFFNPKPKFYYFDDLG-GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDL 662
PH P P+ Y +G +C +ILP N+P+H +G P ++ + AK A +A +L
Sbjct: 718 PHSSESTPHPE-YMMTAMGVKYVCEVILPENSPVHGAIGRPANTKQVAKCSAAFEACLNL 776
Query: 663 HKLGALNDYLL 673
K L++YLL
Sbjct: 777 RKGKHLDEYLL 787
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 190/434 (43%), Gaps = 75/434 (17%)
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKAL--TT 1030
L I I + P+I+HR+E+ LVA+E +L P A+++ E + K T
Sbjct: 1068 LTISALPTRIVAMAYTFPAIIHRIESYLVAVEACSMLH--LPISADLALECMTKDTRNTD 1125
Query: 1031 EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
E +E+ ERLE LGD FLK A L+ LH +E + +R + N N
Sbjct: 1126 EHGEEQVEFQRGMGNNYERLEFLGDCFLKMATSISLYTLHPDSNEFDFHVKRMLMICNKN 1185
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L+ +A + L +IR Q F+ ++ G + G+A
Sbjct: 1186 LMDVALQLKLYEFIRSQAFNRRAWYPEGLVLKK---------------GKAAQ------- 1223
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVE-----FE 1189
+ H L KTIADV EAL+GA + D +A T + +E F+
Sbjct: 1224 -APKKHKLGDKTIADVSEALIGAALLTPSNGHAMDHAVRAVTELVYSTDHAIEKWEDYFK 1282
Query: 1190 ASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPS----FNRLGGC 1244
I++ + ++ ++A +EI + F + LL AF HPS + R+
Sbjct: 1283 GYTKPKYQIAAST----ASQRNVAEQIEITHNYHFHYPRLLRSAFTHPSYPFAYERVPN- 1337
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGD++LD ++L+ +P P LT+ + +V+NQ V V F+ L+
Sbjct: 1338 YQRLEFLGDSLLDMACVNFLFHRFPTKDPQWLTEHKMAMVSNQFLGAVCVALGFHTQLLQ 1397
Query: 1305 DSNVLSETINNYVDYMITP------SSTREVKEGPRC-----------PKVLGDLVESSL 1347
+ ++ +I YV + + R K C PK L D++E+ +
Sbjct: 1398 FNPIIQGSITEYVCEITEAREQAEQDAIRHGKLASECARDYWLHTKLPPKCLPDIIEAYI 1457
Query: 1348 GAILLDSGFNLNTV 1361
GAI +DS FN V
Sbjct: 1458 GAIFVDSSFNYGEV 1471
>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
Length = 1842
Score = 248 bits (633), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 278/1055 (26%), Positives = 446/1055 (42%), Gaps = 163/1055 (15%)
Query: 405 FSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQN----LKFLASWRCHFLV 459
S K++ L+ IL F+ + KCIVFV TAR L+ +L FL +
Sbjct: 724 LSTKVVALLSILKDRFQRPTNDKCIVFVKERYTARLLASLLSTPEAGTPFLKAAPLVGTT 783
Query: 460 GVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
+AG ++ + + FR+G++N L+AT V EEGLDI C LV+RFDL TV +I
Sbjct: 784 SASAGEMHITFRSQTLTMHNFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYNTVIQYI 843
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREIM-DRTSSDA 569
QSRGRAR S Y +V+S N+ ++ IK K E + +R++ + + D
Sbjct: 844 QSRGRARHINSRYYHMVESHNEEQIRTIKEVLKHEKMLKLFASALPEDRKLTGNNFNMDY 903
Query: 570 FTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH 627
F E RIY V +S A ++ +++L + LP + + IC
Sbjct: 904 FLRKERGHRIYPVPNSDAKLTYRMSLTVLSAFVDSLPRAPESVLRVDYVVTTVDKQFICE 963
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ-EDNATEDEPML 686
ILP API +G P ++ + AK A + LH+ G +NDYLL + +A L
Sbjct: 964 AILPEEAPIRGAIGRPATTKQVAKCSAAFETCVILHQKGYINDYLLSTFKRSAHMMRNAL 1023
Query: 687 FSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI----PDPADRIYR 742
+ D G + E ++M L S K ++M + PD DR +
Sbjct: 1024 LAVD-------GKKQEAYDMQTKPTLWSSKGKQ------GIFYMTVLSLKSPDNLDRASQ 1070
Query: 743 EFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVP---SGIMQAQQFQE--MFLKVILDR 797
GL +S LP E + LH GR+ T VP S ++ + + MF +
Sbjct: 1071 PLGLLTRSPLPDLPEFV---LHFGAGRNSPTSCVPLASSITLEKNKLDQVNMFTLCL--- 1124
Query: 798 SEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRK 857
F F K D S Y L+P+ VDWK + +S + T D +
Sbjct: 1125 --FQDVFSKAYKSD----PDSMPYFLVPINCLNAIVDWK-SQNPMSIIDWETVEYVQDFE 1177
Query: 858 SLPSHGPLQLHNGWSSESD--VENSLVY----ATHKKWFYLVTNIVFEKNGYSPYKDSDS 911
+ + P + H W + D ++ + + K W +T + P
Sbjct: 1178 NKQADKPWE-HKPWLGKPDDYFKDKFITDPFDGSRKLWSVGITKEYRPLDPVPPNTAPRK 1236
Query: 912 SSHVDHL-ISSYGIHLK---------HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE 961
+ ++ I Y L +QP++ A + RNLL + + E ++
Sbjct: 1237 GARKNNSNIMEYSCSLWAKARAKRTFDEEQPVIEATYISLRRNLLD--EFDGGELETSKK 1294
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
F L P LK+ +G+ LLP+I+HR+E+ L+A+E LL ++
Sbjct: 1295 SFIILEP----LKVSPLPTTVGAMAYLLPAIIHRVESYLIALEATDLLH------LDIRP 1344
Query: 1022 EMLLKALTTE--------KCQERF------SLERLEILGDAFLKYAVGRHLFLLHDTVDE 1067
++ L+A+T + + Q F + ERLE LGD FLK L+ L+ DE
Sbjct: 1345 DLALEAVTKDSDNSGEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSDE 1404
Query: 1068 GELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHS 1127
R + N NL A + L YIR F+ ++ G
Sbjct: 1405 FRYHVDRMCLICNKNLFNTALKLELYKYIRSAAFNRRAWYPEG----------------- 1447
Query: 1128 QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DDSGFKAATAFL 1179
P+ L + + H L K++ADV EA++GA + D+ +A T +
Sbjct: 1448 ------PELLRGKTATAPNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVV 1501
Query: 1180 K--------WIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLL 1230
W +E + + +A +DMA +E+ + F H LL
Sbjct: 1502 NSDNHNAVVWSDYYKLYEKPKWQTATAT-------AAQIDMARQVEMKHPYHFKHPRLLR 1554
Query: 1231 QAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
AF+HP++ + CYQRLEFLGD++LD ++L+ +P P LT+ + +V+NQ
Sbjct: 1555 SAFIHPAYLFIYEQIPCYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQ 1614
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNY---VDYMITPSSTREVKEGP----------- 1333
+ V F+K L+ + + + I +Y ++ + + T + G
Sbjct: 1615 FLGALCVKLGFHKHLLTLDSQVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWI 1674
Query: 1334 ---RCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
+ PK L D+VE+ +GAI +DS ++ V K
Sbjct: 1675 AVRQPPKCLPDIVEAFIGAIFVDSEYDYGEVEKFF 1709
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 42/221 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQLEL +KA ++NII L TG GKT IAVLL+ ++
Sbjct: 424 RDYQLELFEKAKKQNIIAVLDTGSGKTFIAVLLLR---------------------WIID 462
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
Q+ + + +IG R S W+K +D V+V +IL CL+H F+ M
Sbjct: 463 QELE--DRAIGKPHRV---------SFFLWKKRLDTNMVIVCTAEILRQCLHHSFVTMAQ 511
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGASAQANL 236
I LLIFDE HHA K +HPYA+I+KDFY+ D K +P+IFGMTASPV A+ N+
Sbjct: 512 INLLIFDEAHHA--KKDHPYARIIKDFYRNDTEKDIALPKIFGMTASPV-----DARDNV 564
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV 277
K+ LE LL +++ + ED L+ + + Y P+
Sbjct: 565 KKAAEELEGLLHSQICTAEDPSLLQYSIKGKPETLAYYDPL 605
>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1523
Score = 246 bits (629), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 227/744 (30%), Positives = 342/744 (45%), Gaps = 115/744 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL ++A +N I L TG GKT IAVLL L H+I+ KP + I F
Sbjct: 117 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLL---LKHIIQNELIDRANGKPPR-ISFF 172
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V L QQA V+ ++ V F G L S W+ + + V+V +IL C
Sbjct: 173 LVDSVTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQC 232
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGK 228
L + +I+M+ I LLIFDE HH K +HPYA+I+++ Y K D K PRIFGMTASP+ K
Sbjct: 233 LLNSYIRMDQINLLIFDEAHH--TKKDHPYARIIRESYLKADPTKRPRIFGMTASPIDTK 290
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G ++ +S LE LLD+K+ + L V P+ ++Y
Sbjct: 291 G-----DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEY-------------- 331
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE---NLGVCGALHASY 345
++ + KL +Q L+ ++ L +F L+ LG C A A
Sbjct: 332 ---------DKLDPPFATKL--YQILQARFGDISSLQPVFRFTLQASSELGPCCADRAWA 380
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ D L + EGN R +Q+ C I+ +++K F
Sbjct: 381 YALADD-----VLPKLEGNV------RKLAQSISSPIPQCALKEISRIQEASDIVKNHSF 429
Query: 406 SK-----------KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR 454
+ +LLR ++ F KCIVF + TA+ L + L+ + R
Sbjct: 430 NSPNVPGELSPKVQLLRQ-KLIKYFEHPTKTKCIVFTQKRYTAKMLFDLFSTLE-IPYLR 487
Query: 455 CHFLVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
L+GV +G + M+ + + L KFRSGE+N L AT V EEGLDI C LV+RFDL
Sbjct: 488 PGVLIGVRSGDIVGMNVSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDL 547
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQ---------RELD-LIKNFSKE--EDRMNR 559
T+ ++QSRGRAR S YA +++ N RE + L+++F + EDR+
Sbjct: 548 YNTLIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILH 607
Query: 560 EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
I S E+R + + ++GA ++ +++L RY S L +++ + + +
Sbjct: 608 GIDSEIDSILQGEEEKRTFIIRATGAKLTYHSALAILARYASSLQYEKETSAQATYVVLP 667
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL------- 672
+C +ILP +P+ + G P S AAK+ A L K L+D+
Sbjct: 668 QNNSFVCEVILPEKSPVRGLTGVPASKKSAAKQSAAFDTCVLLRKHKLLDDHFNSVYHRR 727
Query: 673 LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--YPVRLNFYFM 730
LP NA + +S SR ++ML L W K Q P +L +
Sbjct: 728 LPAMRNAR----LAITS---------SRTNQYDMLSKPSL---WGKQQGTLPEKLFATVI 771
Query: 731 QFIP-DPADRIYREFGLFVKSLLP 753
FIP +P R +R L + LP
Sbjct: 772 SFIPSEPLRRRHRSIILLTRERLP 795
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 209/461 (45%), Gaps = 57/461 (12%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
+QP+L + + RNLL K+ D+E F + P L+I ++I +S
Sbjct: 966 QQPVLEVELVRLRRNLLD--KMTDTEKDVETRCFVCIEP----LRISAIPEEIAASCLAF 1019
Query: 990 PSIMHRLENLLVAIELKHLLSAS---------FPEGAEVSAEMLLKALTTEKCQERFSLE 1040
P+I++RL+ L+A+E L S F + ++ + E ++ + ++ + + E
Sbjct: 1020 PAIINRLDAYLIALEGCKTLDLSVKPEYALEAFTKDSDNTEEHRVQQIHVQRGMGK-NYE 1078
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
RLE LGD FLK A LF+ + DE + R + N NL A + L Y R +
Sbjct: 1079 RLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYTRSRG 1138
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVE 1160
F ++ G T+ D R ++AE + H L +KT+ADV E
Sbjct: 1139 FSRHTWYPDGL------------TLLHGRDHRK--KISAESK-----HALREKTVADVCE 1179
Query: 1161 ALVGAFIDDSGF--------KAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSASLD 1211
AL+GA + G KA TA + + A ++ + ++ P LD
Sbjct: 1180 ALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSSYMLPKYQTQSPDGYELD 1239
Query: 1212 MA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSV 1267
+ +E LG++F + LL AF HPS+ CYQRLEFLGD++LD + L+
Sbjct: 1240 LGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYR 1299
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
YP P LT+ + +V+N+ +AV + L SN L I +Y + + +
Sbjct: 1300 YPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENES 1359
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
+ V + P PK L D+VE+ LGA +DS F V
Sbjct: 1360 QGAVDYWLVTKDP--PKCLPDMVEAYLGAAFVDSDFQFRVV 1398
>gi|326481629|gb|EGE05639.1| hypothetical protein TEQG_04648 [Trichophyton equinum CBS 127.97]
Length = 1519
Score = 245 bits (625), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 223/724 (30%), Positives = 338/724 (46%), Gaps = 111/724 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK---------PQKSICIF 110
R+YQLEL +KA E+NII L TG GKT IAVLL L H+I + P + I F
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLL---LKHVIEQELTDRSLGLPPR-ISFF 167
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V LV QQA V++ +I K+ FCG + L + WE + V+V ++L C
Sbjct: 168 LVDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQC 227
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H FI+++ I LLIFDE HHA K HPYA+I+KDFY + + P+IFGMTASPV
Sbjct: 228 LLHSFIQIDQINLLIFDEAHHA--KKEHPYARIIKDFYLKEPERKPKIFGMTASPV---- 281
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTC 288
A+ + + +LE +LD+++ + + L V+ P +++Y + + + Y
Sbjct: 282 -DAKVEVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSKL 340
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
++ +IK + + SR+ T+ L C SY L
Sbjct: 341 RQKFGDIKVLEKVFKFSRE---------TSSSLG-------------SWCSDWIWSYCL- 377
Query: 349 SGDETMRNELIEAEGN------TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE 402
+ET+ +EA N + S C ++ AI + ++ E+L
Sbjct: 378 -SEETLPK--LEARSNRPLMKSVPNQSSCDTEAERIREAGAIIKEHEFGDPVANPELLSR 434
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVG 460
K LL +L F+ +CIVF + TAR L + + + +++ R + LVG
Sbjct: 435 ----KVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKIGSQYI---RPNLLVG 487
Query: 461 VNAG-----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
V +G L R +++ FR GE+N L AT V EEGLDIQ C L++RFDL T+
Sbjct: 488 VRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTL 546
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
+IQSRGRAR +S +A +V+ N L+ + EE R + E++ R + E+
Sbjct: 547 IQYIQSRGRARHMESTFAHMVERNN-----LMHETAVEEVRRSEEVLTRFCK---SLPED 598
Query: 576 RI-------------------YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY 616
R+ Y + S+GA ++ +++L Y S L +++ + + +
Sbjct: 599 RLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYI 658
Query: 617 YFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL---- 672
G IC ILP +PI +G S AK+ A + L K L++Y
Sbjct: 659 IHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETCLLLRKNRLLDEYFISTY 718
Query: 673 ---LPQEDNA----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR----QSWTKSQY 721
LP NA T + +S S E SRGE +L VL Q KS +
Sbjct: 719 HKRLPAMRNARLAITSKKSNKYSMISKPAAWELSRGESPTVLYATVLSLSDCQKLQKSYH 778
Query: 722 PVRL 725
P+ L
Sbjct: 779 PIVL 782
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 219/476 (46%), Gaps = 75/476 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSSLSL 988
QP+LR++ + RN L +++++ +Y+ +C LKI S + + + +
Sbjct: 963 QPVLRSELIQLRRNFL---DIDENQKSPPVDYY------VCAEALKISAISVPLATQIFV 1013
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQE------RF--- 1037
P+I+ R+E+ L+A+E L P E+ L+ALT +E +E RF
Sbjct: 1014 FPAIIWRMESYLIALEACEKLQLKIP------PELALEALTKDSENTEEHGMEQIRFQSG 1067
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ ERLE LGD FLK A LF ++ DE + +R + N NL A +
Sbjct: 1068 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFK 1127
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR + F ++ G + + P+ H L KT
Sbjct: 1128 FIRSRSFSRRAWYPEGLTL-----------LKGKDKKEGPNG---------PEHALADKT 1167
Query: 1155 IADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
IADV EAL+GA + D KA T F+ +VE A + +
Sbjct: 1168 IADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASA 1227
Query: 1207 SAS-LDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLIT 1261
SAS +D+A ++ LG+ F + LL AF+HPS+ CYQRLEFLGD++LD +
Sbjct: 1228 SASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDSLLDMVCV 1287
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++L+ YP P LT+ + +V+N+ ++AV+ + + LI SN L I +Y + +
Sbjct: 1288 NHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQGQITSYTEELQ 1347
Query: 1322 TPSSTRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
E E P+C L D+VE+ LGAI +DS FN + V + F+
Sbjct: 1348 AMKIKMEGNLEAWTYTNEPPKC---LPDIVEAYLGAIFVDSNFNFDVVDEFFRKFI 1400
>gi|226294068|gb|EEH49488.1| Dicer [Paracoccidioides brasiliensis Pb18]
Length = 1423
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 318/1304 (24%), Positives = 536/1304 (41%), Gaps = 229/1304 (17%)
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY- 207
W++ + ++V ++L CL H FI+ME I LLIFDE HH K +HPYA+I+KDFY
Sbjct: 132 WKRHFSKNMIIVCTAEVLYQCLLHSFIQMEQINLLIFDEAHH--TKKDHPYARIVKDFYL 189
Query: 208 -KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSS 266
+ P+IFGMTASPV A+ ++ ++ SLE LLD+++ + + + L V+
Sbjct: 190 QMTESQHRPKIFGMTASPV-----DAKVDVVTAVKSLEMLLDSQIATASNLDALRQSVAR 244
Query: 267 PVVRVYQYG---PVINDTSSSYVTCSEQLAEIK--REQYISALSRKLHDHQSLRNTTKQL 321
P + + Y P + Y + Q I ++ +I +L T L
Sbjct: 245 PTEQEWVYDRLDPAFE--TDLYKSMHSQFGNISVLKKMFICSL-----------EATSTL 291
Query: 322 NRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTID--DSLCRFASQASE 379
R +C + L S L G + R + + GN D + + +A +
Sbjct: 292 GR------WCSDWLWTIVLDEPSLPKLEGSIS-RRYIRTSSGNHTKGVDEMIKSLREAVK 344
Query: 380 VFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTAR 438
V + + + C E L S K+ L LS F KC+VFV + +AR
Sbjct: 345 VI----KDHTFYTPVDCPEHL-----SPKVRLLHHQLSKYFERHTDTKCVVFVEKRHSAR 395
Query: 439 ALSYILQNLKFLASWRCHFLVGVN---AGLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
L + +L R L+GV AG + +S L KFR GELN LV +
Sbjct: 396 LLGELF-SLIGTRHMRTGVLIGVRTDEAGGEKVSFRQQFWTLLKFRKGELNCLVCFMIAP 454
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QRELD------- 545
+ + + +D+ +YA +++ N QR LD
Sbjct: 455 PKIFVP----LFNYDM-------------------QYAHMMERDNLIHQRCLDEAQEAEN 491
Query: 546 LIKNF--SKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL 603
+++ F S EDR+ R D + + + V S+G+ ++ +++L Y S L
Sbjct: 492 IMRQFCESLPEDRIIRGASDELDKFLYKERCRKTFTVPSTGSKLTYNSALAVLAHYASSL 551
Query: 604 PHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
++ + + ++ G +C ++LP +P+ + G P + +AK+ A + L
Sbjct: 552 QYENEMSTRANYFIHRIRGAFVCEVVLPEKSPVRGLTGRPAVAKLSAKQSAAFETCLMLR 611
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--Y 721
K G L+DY L + P++ ++ + + ++M+V L W KS+
Sbjct: 612 KNGLLDDYFLSKYHKRL---PLMRNA---KLAIKSKKTNQYDMMVKPKL---WEKSRGMT 662
Query: 722 PVRLNFYFMQFIPDPA-DRIYREFGLFVKSLLPGEAE---HLKVDLHLARGRSVMTKLVP 777
P ++ + P R+++ L + LP +L+ D+ V++ +
Sbjct: 663 PYEVHATVLTLRPSAKLRRVHQPLVLLTRESLPKFPVFPLYLETDIEC----DVVSIPLR 718
Query: 778 SGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSV---- 833
+ + +Q ++F L F L Y + Y L P+ +V
Sbjct: 719 ASMQVSQSELDLFTTFTL------RIFQDLFHKVYDHQPAMMPYWLAPISLEYGNVLEDS 772
Query: 834 ------DWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE---SDVENSLVY- 883
DWKII+ +P W+S+ S +EN ++
Sbjct: 773 NLRQLIDWKIIQHVQENPEIC----------------------WTSDMPRSSLENIFMFD 810
Query: 884 ATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHP-----------KQP 932
++ Y + + P + + I +Y I L QP
Sbjct: 811 KWDDRYRYFTSELELNIRPSDPPPPTMAKRRYMDSIMNYCISLYKKSRLKFLGTCDWNQP 870
Query: 933 LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
++RA+ L RLR L +R E H+ EE + PE L+I + P++
Sbjct: 871 VVRAE-LVRLRRNLLDRTTE----HKGEETSYYICPE--PLRISALPAPVAVFAFTFPAM 923
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFS------------ 1038
+ R+E+ L+A+E + L + + E+ L+ALT ++ +E +
Sbjct: 924 ISRIESYLIALEACNKLQLT------IIPELALEALTKDSDNTEEHRAEQIHFQRGMGKN 977
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD FLK + LF ++ DE + +R + N NL A + ++R
Sbjct: 978 YERLEFLGDCFLKMSTSISLFAMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRT 1037
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
Q F ++ G + G+A + ++ H L K+IAD+
Sbjct: 1038 QGFSRRNWYPEGIKL---------------LQGKAKSE------TAENKHSLADKSIADI 1076
Query: 1159 VEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS-AS 1209
EAL+GA + D+ KA TAF+ QV S V +
Sbjct: 1077 CEALIGASLLSGGRVHRFDTAVKAVTAFVNSENHQVSDWQSYVGLYSLPRYQIAEADDTQ 1136
Query: 1210 LDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLY 1265
LD+A + LG++F + LL AF H S+ CYQRLEFLGD++LD + +LY
Sbjct: 1137 LDLAQQIGDRLGYRFKYPRLLSSAFTHASYPTGWSKVPCYQRLEFLGDSLLDMVCVEHLY 1196
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI---- 1321
YP P LT+ + +V+N+ VAV ++ L++ S L I Y + +
Sbjct: 1197 HKYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSKALLGQITRYAEEIEATET 1256
Query: 1322 ----TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
+P + P+C L D++E+ +GAI +DS F+ V
Sbjct: 1257 ESIDSPDFWTTTSDPPKC---LPDMLEAYIGAIFVDSNFSFEVV 1297
>gi|225561826|gb|EEH10106.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1502
Score = 244 bits (623), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 205/665 (30%), Positives = 301/665 (45%), Gaps = 85/665 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL +KA NII L TG GKT IAVLL+ ELA I FL +
Sbjct: 91 REYQLELFEKAKAANIIAVLDTGSGKTFIAVLLLKHVIQSELADRASGNPPRISFFLVDS 150
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V++ +I + FCG + L S WEK + ++V ++L CL
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRS 210
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI+ME I LLIFDE HHA K HPYA+I+KDFY +P+ K P+IFGMTASPV
Sbjct: 211 FIRMEQINLLIFDEAHHA--KKEHPYARIVKDFYLRRPEAQKRPKIFGMTASPV-----D 263
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ ++ K+ +LE LLD+++ + + + L ++ P +++ Y + + + C
Sbjct: 264 AKVDVAKAAKNLETLLDSQIATASNQDVLRQAIARPTEQIWVYDKLDATSETDLYKC--- 320
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
+++ ++ L + LE + G + ++
Sbjct: 321 ----------------------MQSRFGKIRELEKIFFYALEASSMLGRWCSDWLWTFAL 358
Query: 352 ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPF-----FS 406
E EL + EG + + S+ R A L P S
Sbjct: 359 EAA--ELPKLEGRVSKSYMQSSSRDHSKGLDEAIRLLREAGQLIRNHTFDTPVDCPAHLS 416
Query: 407 KKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN--- 462
K+ L LS F KCIVFV + TAR L+ + + + L+GV
Sbjct: 417 SKVRLLRHELSLYFERHTDTKCIVFVQQRHTARLLAELFSRIG-TRHMQTGILIGVQHDG 475
Query: 463 -AGLKSMSRNAMKSILEKFRSGELNLL--VATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
G R ++L KFR GELN L AT V EEGLDI C L+IRFDL T+ +I
Sbjct: 476 IGGANFSFRQQFLTLL-KFRKGELNCLEQFATSVAEEGLDIPDCNLIIRFDLSLTMIQYI 534
Query: 520 QSRGRARMPQS-----------------EYAFLVDSGNQRELDLIKNFSKEEDRMNR--- 559
QSRGRAR S +YA +V+ GN I+ + E M R
Sbjct: 535 QSRGRARHSNSIVWLSLYDSECLANGTLQYAHMVERGNLIHASCIQEAQRAEHIMRRFCE 594
Query: 560 ----EIMDRTSSD--AFTCSEERIYK---VDSSGACISAGYGVSLLHRYCSKLPHDEFFN 610
+ + R SSD +ER YK V S+GA ++ + +L Y S L +++ +
Sbjct: 595 ALPEDRIIRGSSDDLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKETS 654
Query: 611 PKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
P+ ++ +C ILP +P + G P + A++ A + L K G L+D
Sbjct: 655 PQVNYFIERIDSAFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILDD 714
Query: 671 YLLPQ 675
+ + +
Sbjct: 715 HFVSK 719
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 208/475 (43%), Gaps = 71/475 (14%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
KQP++RA+ L RLR L +R E E Y P L+I + +
Sbjct: 966 KQPVVRAE-LVRLRRNLLDRATEQERGEETAYYICPEP-----LRISALPPPVAAFAFAF 1019
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE--------KCQERF---- 1037
P+I+ R+E+ L+++E L S + + L+ALT + K Q F
Sbjct: 1020 PAIISRIESYLISLEACDKLQLS------IETHLALEALTKDSDNTEEHRKEQIHFQRGM 1073
Query: 1038 --SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
+ ERLE LGD FLK A LF ++ DE + +R + N NL A R L +
Sbjct: 1074 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEF 1133
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
+R Q F ++ G + G+A + ++ L KTI
Sbjct: 1134 VRTQGFSRRNWYPEGIKL---------------LQGKAKSE------SAQNKQALGDKTI 1172
Query: 1156 ADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
AD+ EAL+GA + D+ KA T F+ +V S + + S
Sbjct: 1173 ADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLPSYQIAQAD 1232
Query: 1208 A-SLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITS 1262
A LD+A + LG+ F + LL AF H S+ CYQRLEFLGD++LD +
Sbjct: 1233 AGQLDLAKQIGNRLGYYFTYPRLLRSAFTHASYPSAWSTVPCYQRLEFLGDSLLDMVCVE 1292
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-- 1320
+LY YP P LT+ + +V+N+ VAV +K L++ SN L I Y + +
Sbjct: 1293 HLYHHYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHKHLLYISNALFGQITRYAEEIEV 1352
Query: 1321 ------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
+P + + P+C L D++E+ +GAI +DS F+ V +L
Sbjct: 1353 AVAESADSPDAWTTTSDPPKC---LPDMLEAYIGAIFVDSNFSFEVVEDFFQRYL 1404
>gi|327355811|gb|EGE84668.1| hypothetical protein BDDG_07613 [Ajellomyces dermatitidis ATCC
18188]
Length = 1509
Score = 244 bits (623), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 216/733 (29%), Positives = 334/733 (45%), Gaps = 90/733 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL +KA N I L TG GKT IAVLL+ ELA I FL T
Sbjct: 94 REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 153
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V++ +I + FCG + L S W+K + ++V ++L CL
Sbjct: 154 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 213
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI+ME I LLIFDE HHA K +HPYA+I+KDFY K + P+IFGMTASPV
Sbjct: 214 FIQMERINLLIFDEAHHA--KKDHPYARIIKDFYLQKIVVQNRPKIFGMTASPV-----D 266
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ ++ K+ +LE LLD+++ + + L + P +++ Y ++D S + +
Sbjct: 267 AKVDVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDR-LDDPSETEL----- 320
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL-LSG 350
++S+++ ++ L F LE G + ++ +
Sbjct: 321 -------------------YKSMQSRFGRIRELEKIFSFALEASSTLGRWCSDWLWTFAL 361
Query: 351 DETMRNELIEAEGNTIDDSL-------CRFASQASEVF---AAICRRDGIASDLSCIEVL 400
DE EL + EG + + A +A ++ A + + + + C E L
Sbjct: 362 DEA---ELPKLEGKISKSYMQSRSGNQLKGADEAIDLLREAAQLIKSHAFYTPVDCTEHL 418
Query: 401 KEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
S K+ L LS F KCIVF+ + TAR L+ + + R L+
Sbjct: 419 -----SSKVRLLSHELSMYFERHTDTKCIVFIQQRYTARLLAELFSRIG-TQHMRTGVLI 472
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV G R ++L KFR GELN L AT V EEGLDI C LVIRFDL T+
Sbjct: 473 GVRHDGIGGANFSFRQQFLTLL-KFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTM 531
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR-------EIMDRTSSD 568
++QSRGRAR S YA +V+ N ++ + E+ M R + + R SSD
Sbjct: 532 IQYVQSRGRARHSHSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSSD 591
Query: 569 --AFTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG 623
ER + + S+GA ++ +++L Y S L ++ + + ++ G
Sbjct: 592 DLGMILDNERYRNSFTIHSTGAKLTYESSLAVLAHYASSLQYENDMSAQVNYFIERIDGA 651
Query: 624 TICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
+C LP +P + G P + AK+ A + L K G L+D+ + ++
Sbjct: 652 FVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGLLDDHFV------SKYH 705
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYRE 743
L + + + + ++M+V L W ++ + Y P ++ RE
Sbjct: 706 KRLPAMRNAKLAIKSKKANQYDMIVKPKL---WENARGTIPKEIYATFLTLRPTGKLRRE 762
Query: 744 FG---LFVKSLLP 753
+ LF + LP
Sbjct: 763 YHPLLLFTRDALP 775
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 213/473 (45%), Gaps = 84/473 (17%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
KQP+ RA+ L RLR L +R+ E E E Y+ + PE L+I + +
Sbjct: 950 KQPVFRAE-LVRLRRNLLDRETE-QEKGEGTTYY--ICPE--PLRISALPAPVAAFAFAF 1003
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERF---------- 1037
P+I+ RLE+ L+++E +L + + + L+ALT ++ +E
Sbjct: 1004 PAIISRLESYLISLEACDMLHIN------IKTHLALEALTKDSDNTEEHRGEQIHFQRGM 1057
Query: 1038 --SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
+ ERLE LGD FLK A LF ++ DE + +R + N NL A R L +
Sbjct: 1058 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEF 1117
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
IR Q F ++ G + G+A + S+ H L KTI
Sbjct: 1118 IRTQGFSRRNWYPEGIKL---------------LQGKAKSE-------SQNKHSLGDKTI 1155
Query: 1156 ADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP-- 1205
AD+ EAL+GA + DS KA T F+ + AS+ C + LP
Sbjct: 1156 ADICEALIGASLLSGGKAHRFDSAVKAVTTFVN----SDDHRASEWN--CYVNLYSLPDY 1209
Query: 1206 LSASLDMATLEIL------LGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVL 1256
A D L++ LG+QF + LL AF H SF CYQRLEFLGD++L
Sbjct: 1210 QIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDSLL 1269
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D + YLY YP P LT+ + +V+N+ VAV ++ LI+ SN L I Y
Sbjct: 1270 DMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRY 1329
Query: 1317 V--------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
V D +P + + P+C L D++E+ +GAI +DS F V
Sbjct: 1330 VEEIELAEADSNNSPDAWTTTSDPPKC---LPDMLEAYIGAIFVDSNFKFEVV 1379
>gi|444841767|gb|AGE12616.1| Dicer 2 [Laodelphax striatella]
Length = 1654
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 210/741 (28%), Positives = 357/741 (48%), Gaps = 81/741 (10%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPT 114
+AR YQ EL A++ N I+YL TG GKT +A ++I + I K FL T
Sbjct: 27 VARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMIIKHFSADIEKKLSEGGKRAFFLVNT 86
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV+QQA I+ F++ + G + L S W++E+D V+VM QILL L H
Sbjct: 87 VQLVEQQALSIQHQTTFEIGQYTGQTGCDLWSEDVWKRELDNKSVIVMTAQILLNLLTHY 146
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDF-----YKPDIMKVPRIFGMTASPVVGK 228
++K+ I +++FDECH+A VK +HP IMK F PD + P + G+T S +
Sbjct: 147 YLKLSNIRVIVFDECHNA-VK-DHPMRCIMKFFEGVTLVPPD--QQPHVVGLTGS--LLN 200
Query: 229 GASAQANLPKSINSLENLLDAKVYSVED---AEDLESFVSSPVVRVYQYGPVINDTSSSY 285
A ++ +P+ I LE +++ + + A + + + P + + P + SS
Sbjct: 201 SAIDESRVPEYIRDLEATFQSRIITSVNESMALAIARYSADPQQVIVPFSPGNHMLSSLC 260
Query: 286 VTCSEQLAEIKREQYISALSRKLHD-------------HQSLRNTTKQLNRLHDSMKFCL 332
SE L + R I L+ K+ D + L+ K+L + +K+ +
Sbjct: 261 TDVSEVLDGVMR--IIGKLNLKVEDVHIPQKPSSRAIQMEELQKLNKKLVNMIVDVKYQM 318
Query: 333 ENLGVCGALHASY-ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFA-AICRRDGI 390
ENLG G A+ +++ + R+ ++ NT L + + ++F I + +G
Sbjct: 319 ENLGAYGGFKAALAMMILLERKKRSAQLQVHANTYH-FLITYLTYVRKMFTDVISKYEG- 376
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
E + F S K+L+L+ +L+ F+ + + ++FV R T + L YIL++LK L
Sbjct: 377 -------EERIKLFVSNKVLKLVELLADFK--ETDRALIFVTRRFTCKCLQYILEDLK-L 426
Query: 451 ASWRCHFLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ + F+VG N+ + +R + K +L+ F G+ N L+A+ V EEG+D+Q C
Sbjct: 427 PNVKSDFIVGYNSNPFNDTREGLLEKKVNKRVLKSFNKGKKNFLIASDVLEEGIDVQICN 486
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI--- 561
+V++F P T+ S+IQS+GRAR S+Y L ++ N I F E R+ E+
Sbjct: 487 MVVKFAPPTTMRSYIQSKGRARSRISKYYILTETSNSECYRKISKFETLEARLKYELVGK 546
Query: 562 -MDRT-------SSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
+DRT + F + + + G I +SL++RYC+ L D+F P
Sbjct: 547 FLDRTLPTQEELNESIFKAQMKPFFPLGPDGPKIEGSTPISLINRYCTSLDCDKFSTLSP 606
Query: 614 KFYYFDDLGGTICH-------IILPANAPIHQIVGTPQ-SSMEAAKKDACLKAIEDLHKL 665
+++ + T CH + LP ++P+ QI+ + S+E AK+ A LKA + L++
Sbjct: 607 --FWWKERVVTDCHEQKIIVYLQLPNSSPVRQIIKSDAFPSIELAKRSAALKACKLLYES 664
Query: 666 GALNDYLLP-----QEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ 720
L++ +LP Q+ P + E +G + L P ++ KS
Sbjct: 665 QELDNNMLPCGKRSQQLQNKNLYPCWRDDEPPVDEADGDATSQFKKLSPVGTKKC--KSI 722
Query: 721 YPVRLNFYFMQFIPDPADRIY 741
YP + + P+P ++Y
Sbjct: 723 YPKKFPACIYECRPEPGKKVY 743
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 186/414 (44%), Gaps = 62/414 (14%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
P V +L+ LT + F+LERLE LGD+FLKY+V LF + EG+LT
Sbjct: 1165 PNDLGVELADVLQVLTAASAHDIFNLERLETLGDSFLKYSVSLILFTRFPELSEGQLTMI 1224
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDP-----CQFFALGRRCPRICSK--------- 1119
+ + N NL L I+ F+ F + R R+ +
Sbjct: 1225 KGKIIGNRNLFYCGEEKELGSIIKTVEFNTESDWVAPGFCVDRTVQRLLRELSVNPRYLY 1284
Query: 1120 ETERTIHSQYDGRAPDDLNAEVRCSKGHHW-------------------LHKKTIADVVE 1160
E E T + G+ + + W + KT++D VE
Sbjct: 1285 EIELTKEERDSGQLSESTRDMIENKLYDSWEEDTDYANYSNAHFISQQVVSNKTVSDSVE 1344
Query: 1161 ALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASL---------D 1211
AL+G I G + L+W+ + + + + K P S+
Sbjct: 1345 ALLGLCIKSFGIEKGFEILRWLKVT---DPNLIKPDAYVEKKVEPTILSMIGDINFHIHQ 1401
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYP 1269
LE L+ ++F R LLQA HP++ N + YQRLEFLGDA+LD+LIT++++
Sbjct: 1402 PDYLERLINYKFKQRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLITTHIFEHCD 1461
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD----------- 1318
L PG+LTDLRS LVNN A++AV +KFL+ S LS+ I ++V+
Sbjct: 1462 NLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSFQLSKVIESFVERQESRQHEFTD 1521
Query: 1319 ---YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
Y+I + V E PK+LGD+ ES +GAI LDS L T W+ + F+
Sbjct: 1522 QTLYLINEIDSN-VGECIEVPKILGDVFESLVGAIFLDSNRCLKTTWEFIYRFM 1574
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 1005 LKHLLSASFPEGAEVSAEMLLKALTTEKCQERF---SLERLEILGDAFLKYAVGRHLFLL 1061
L+ L++ F + A LL+AL+ Q + +RLE LGDA L + + H+F
Sbjct: 1405 LERLINYKFKQRA-----FLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLITTHIFEH 1459
Query: 1062 HDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKET 1121
D + GELT RS VNN L +A R L ++ + F + + R S++
Sbjct: 1460 CDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSFQLSK--VIESFVERQESRQH 1517
Query: 1122 ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
E T + Y L E+ + G K + DV E+LVGA DS
Sbjct: 1518 EFTDQTLY-------LINEIDSNVGECIEVPKILGDVFESLVGAIFLDSN 1560
>gi|326472405|gb|EGD96414.1| dicer [Trichophyton tonsurans CBS 112818]
Length = 1519
Score = 243 bits (621), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 222/724 (30%), Positives = 337/724 (46%), Gaps = 111/724 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK---------PQKSICIF 110
R+YQLEL +KA E+NII L TG GKT IAVLL L H+I + P + F
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLL---LKHVIEQELTDRSLGLPPR-FSFF 167
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V LV QQA V++ +I K+ FCG + L + WE + V+V ++L C
Sbjct: 168 LVDSVTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQC 227
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H FI+++ I LLIFDE HHA K HPYA+I+KDFY + + P+IFGMTASPV
Sbjct: 228 LLHSFIQIDQINLLIFDEAHHA--KKEHPYARIIKDFYLKEPERKPKIFGMTASPV---- 281
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTC 288
A+ + + +LE +LD+++ + + L V+ P +++Y + + + Y
Sbjct: 282 -DAKVEVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSKL 340
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
++ +IK + + SR+ T+ L C SY L
Sbjct: 341 RQKFGDIKVLEKVFKFSRE---------TSSSLG-------------SWCSDWIWSYCL- 377
Query: 349 SGDETMRNELIEAEGN------TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE 402
+ET+ +EA N + S C ++ AI + ++ E+L
Sbjct: 378 -SEETLPK--LEARSNRPLMKSVPNQSSCDTEAERIREAGAIIKEHEFGDPVANPELLSR 434
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVG 460
K LL +L F+ +CIVF + TAR L + + + +++ R + LVG
Sbjct: 435 ----KVLLLRDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKIGSQYI---RPNLLVG 487
Query: 461 VNAG-----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
V +G L R +++ FR GE+N L AT V EEGLDIQ C L++RFDL T+
Sbjct: 488 VRSGGDKIGLDISFREQFLNVI-AFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTL 546
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
+IQSRGRAR +S +A +V+ N L+ + EE R + E++ R + E+
Sbjct: 547 IQYIQSRGRARHMESTFAHMVERNN-----LMHETAVEEVRRSEEVLTRFCK---SLPED 598
Query: 576 RI-------------------YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY 616
R+ Y + S+GA ++ +++L Y S L +++ + + +
Sbjct: 599 RLLKGTGDIDMMIEKDRQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYI 658
Query: 617 YFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL---- 672
G IC ILP +PI +G S AK+ A + L K L++Y
Sbjct: 659 IHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETCLLLRKNRLLDEYFISTY 718
Query: 673 ---LPQEDNA----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR----QSWTKSQY 721
LP NA T + +S S E SRGE +L VL Q KS +
Sbjct: 719 HKRLPAMRNARLAITSKKSNKYSMISKPAAWELSRGESPTVLYATVLSLSDCQKLQKSYH 778
Query: 722 PVRL 725
P+ L
Sbjct: 779 PIVL 782
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 219/476 (46%), Gaps = 75/476 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSSLSL 988
QP+LR++ + RN L +++++ +Y+ +C LKI S + + + +
Sbjct: 963 QPVLRSELIQLRRNFL---DIDENQKSPPVDYY------VCAEALKISAISVPLATQIFV 1013
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQE------RF--- 1037
P+I+ R+E+ L+A+E L P E+ L+ALT +E +E RF
Sbjct: 1014 FPAIIWRMESYLIALEACEKLQLKIP------PELALEALTKDSENTEEHGMEQIRFQSG 1067
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ ERLE LGD FLK A LF ++ DE + +R + N NL A +
Sbjct: 1068 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFK 1127
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR + F ++ G + + P+ H L KT
Sbjct: 1128 FIRSRSFSRRAWYPEGLTL-----------LKGKDKKEGPNG---------PEHALADKT 1167
Query: 1155 IADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
IADV EAL+GA + D KA T F+ +VE A + +
Sbjct: 1168 IADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASA 1227
Query: 1207 SAS-LDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLIT 1261
SAS +D+A ++ LG+ F + LL AF+HPS+ CYQRLEFLGD++LD +
Sbjct: 1228 SASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDSLLDMVCV 1287
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++L+ YP P LT+ + +V+N+ ++AV+ + + LI SN L I +Y + +
Sbjct: 1288 NHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQGQITSYTEELQ 1347
Query: 1322 TPSSTRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
E E P+C L D+VE+ LGAI +DS FN + V + F+
Sbjct: 1348 AMKIKMEGNLEAWTYTNEPPKC---LPDIVEAYLGAIFVDSNFNFDVVDEFFRKFI 1400
>gi|388565188|gb|AFK73581.1| dicer-2 [Nilaparvata lugens]
Length = 1656
Score = 243 bits (621), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 272/1063 (25%), Positives = 475/1063 (44%), Gaps = 142/1063 (13%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+AR YQ EL A++ N I+YL TG GKT +A ++I I K FL T
Sbjct: 27 VARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMIIKHFGADIEKKLSEGGKRAFFLVNT 86
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV+QQA+ I+ F V + G + L S W++E+D V+VM QILL L H
Sbjct: 87 VQLVEQQAQSIKRQTTFTVGEYTGQTGCDLWSEQIWKRELDNKSVIVMTSQILLNLLSHS 146
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++K+ I +++FDECH+A VK +HP IMK F + P + G+T S + +
Sbjct: 147 YLKLSNIRIIVFDECHNA-VK-DHPMRCIMKFFENVPASQQPHVVGLTGSLLNSTIDEGK 204
Query: 234 AN----------LPKSINSL-ENL-LDAKVYSVEDAEDLESFVSSPVVR--VYQYGPVIN 279
N L + I S+ EN+ L YS + +++ +F +R + ++
Sbjct: 205 VNEYIRELEATFLSRIITSVNENMALAIARYSTDPQQEMVAFSPGTHMRSELCTSINIVL 264
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--TKQLNRLHDSMKFCLENLGV 337
D++ VT L +K E+ L +H N K+L + +K+ +ENLG
Sbjct: 265 DSAIRNVT----LFNLKMEEDFVPLKPSIHAIAMEENNKLNKKLANMIVDIKYQMENLGA 320
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEV-FAAICRRDGIASDLSC 396
GA A+ ++ E + + LC + ++ F + + +G +
Sbjct: 321 YGAYKAALAMMILLERKKRSAQLRKHAAAFQYLCTMLTLVRKISFDVLSKYEGEERIIR- 379
Query: 397 IEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH 456
F S K+L+L+ + F+ + K ++FV R + + L YIL++LK L + +
Sbjct: 380 -------FVSNKVLKLLELFKGFK--ETDKALIFVTRRFSCKCLQYILEDLK-LPNVKSD 429
Query: 457 FLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
F+VG N + +R + K +L++F G+ N+L+A+ V EEG+D+QTC VI+FD
Sbjct: 430 FIVGYNTNPFNDTREGLLEKKVNKKVLKRFNGGDTNVLIASDVLEEGIDVQTCNTVIKFD 489
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR------ 564
P T+ S+IQS+GRAR QS++ + ++ + + I F + E ++ E++ +
Sbjct: 490 PPTTMRSYIQSKGRARTRQSKFYIMTEAKDYKVEGKINKFERLETKLKHELVGKFLERSL 549
Query: 565 -----TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY-- 617
++ F + + Y + G I ++L++RYC L D F P F++
Sbjct: 550 PSEKELANSIFKTTIKPFYPLGPDGPKIEGSTPIALINRYCMSLDCDRFSTLTP-FWWKE 608
Query: 618 ------FDDLGGTICHIILPANAPIHQIVGTPQ-SSMEAAKKDACLKAIEDLHKLGALND 670
F++ + ++ LP ++P+ ++ + ++E AK+ A LKA + L+ L+D
Sbjct: 609 VSKKNGFNE-NNIVVYLQLPISSPVRDVIKSDAFPNVELAKRSAALKACKLLYDSRELDD 667
Query: 671 YLLPQEDNATEDEPM-LFSSDSDSYEGEGSRGELHEMLV---PAVLRQSWT-----KSQY 721
+LP+ + + E LF D E + + LV P V RQ+ KS Y
Sbjct: 668 KMLPRGKTSQQLEDRGLFPCWRD--EAPPTESDDSAALVRVGPVVKRQTLVGTKKCKSIY 725
Query: 722 PVRLNFYFMQFIPDPADRIY----------------REFGLFVKSLLPGEAEH------- 758
+ + P P +++Y R+ F LL ++E
Sbjct: 726 NKKFPECMCECRPMPGEKVYMHIIKMKPVYSEPKGNRKKAFF--ELLKSDSEFAILTTKK 783
Query: 759 ----LKVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDY 812
LK L + G + +V + ++ E+F + S+ DY
Sbjct: 784 WPMLLKFPLFITMGEIKVEVIVNQACQTLSQKEIDEIFNFHCIIFSDVLQCINMFMFRDY 843
Query: 813 CESSSSTFYLLLPVIFH--KNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNG 870
S YLL P+ ++ ++W +IR P +P +K +
Sbjct: 844 ENKEHS--YLLAPIKLENGRSVINWSVIRDNQEFPEIISPPVEERQKDI----------- 890
Query: 871 WSSESDVENSLVYATHKKWF----YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGI-- 924
+E +NS+V ++ + Y+VT++ + S + D ++ + ++ Y
Sbjct: 891 VVTEEIYKNSVVIPWYRGFLPRQAYIVTDLSKNETALSDFPSGDYPTYEKYFVTKYANVE 950
Query: 925 HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES----HELEEYFDDLPPELCQLKIIGFSK 980
L ++PLL + L R N L R + S + EE+ + L PELC + +
Sbjct: 951 KLYSAQKPLLEVRALSRRLNCLRPRHSVQATSKRKKKQEEEFEESLVPELCVRCAVPAAY 1010
Query: 981 DIGSSLSLLPSIMHRLENLLVAIELK-------HLLSASFPEG 1016
+ + +LLPS +HR+ LL+A EL+ +L + + P G
Sbjct: 1011 WLKA--TLLPSCVHRITALLLADELRVTIATDLNLSTVTLPPG 1051
Score = 171 bits (433), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 188/416 (45%), Gaps = 69/416 (16%)
Query: 1015 EGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
E V L+ LT + F+LERLE LGD+FLKYAV LF+ + EG+LT +
Sbjct: 1169 EAPGVELADFLQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIK 1228
Query: 1075 SNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKET------ERTIHSQ 1128
+ N NL + L I+ F+ + P C T E I+ +
Sbjct: 1229 GKVIGNRNLFYCGEQKGLGSIIKAVEFNTESDWI----APGFCVDRTVQNLFRELNINPR 1284
Query: 1129 YDGRAPDDLNAEVRCSK--------------------------GHHWLHK-----KTIAD 1157
Y P + E+ C K H++ + KT++D
Sbjct: 1285 YLYEIPLSRD-EIECGKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVTSNKTVSD 1343
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL----SASLDMA 1213
VEAL+G +I G + L+W+ + + +T + K P +D
Sbjct: 1344 SVEALLGLYIQSYGLEKGFDMLRWLKV---IDPKLITPDVYTKKKVEPTILFKGGQIDFH 1400
Query: 1214 T-----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
LE L+ ++F R LLQA HP++ N + YQRLEFLGDA+LD+L+T+++Y
Sbjct: 1401 IHHPDYLEKLINYKFKDRTFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYE 1460
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST 1326
L PG+LTDLRS LVNN A++AV +KFL+ S LS+ I +V+ + +
Sbjct: 1461 YCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVERQESRNHD 1520
Query: 1327 RE-------------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
+ E PK+LGD+ ES +GAI LDS L T W + F+
Sbjct: 1521 FSDDTLFLIDEIDCIIGESIEVPKILGDVFESLVGAIFLDSNKCLKTTWDFIYRFM 1576
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 955 ESHELEEYFDDLPPELCQLKIIG---FSKDIGSSLSLLPSIMHRLENLLVAIE----LKH 1007
+S+ LE+ FD L LK+I + D+ + + P+I+ + + I L+
Sbjct: 1354 QSYGLEKGFD----MLRWLKVIDPKLITPDVYTKKKVEPTILFKGGQIDFHIHHPDYLEK 1409
Query: 1008 LLSASFPEGAEVSAEMLLKALTTEKCQERF---SLERLEILGDAFLKYAVGRHLFLLHDT 1064
L++ F + LL+AL+ Q + +RLE LGDA L + V H++ D
Sbjct: 1410 LINYKFKDRT-----FLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYEYCDN 1464
Query: 1065 VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC--PRICSKETE 1122
+ GELT RS VNN L +A R L F L R C ++ E
Sbjct: 1465 LTPGELTDLRSALVNNVTLASIAVRIGLHK------------FLLLRSCQLSKVIEAFVE 1512
Query: 1123 RTIHSQYDGRAPDD---LNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
R +D DD L E+ C G K + DV E+LVGA DS
Sbjct: 1513 RQESRNHD--FSDDTLFLIDEIDCIIGESIEVPKILGDVFESLVGAIFLDSN 1562
>gi|356571230|ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 756
Score = 243 bits (621), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 204/705 (28%), Positives = 334/705 (47%), Gaps = 71/705 (10%)
Query: 774 KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLP-VIFHK-- 830
+L P + ++FQ +++L+R ++ + D + +LLLP + H+
Sbjct: 87 QLSPEKVQSCRRFQTTLFRILLNRDV--TKLTSVSDDFSLGDNPEIDFLLLPATVKHQRP 144
Query: 831 -NSV-DWKIIRRCLSSPVFGTPGGSVDRKSLPSHG-PLQLHNGWSSESDVENSLVYATHK 887
NS+ DWK PV P S H +++ N +EN +VY H
Sbjct: 145 SNSIIDWK--------PVLSVPFSSESTCDCKDHACNVRIRNDSVCSCKLENCVVYTPHN 196
Query: 888 KWFYLV--TNIVFEKNGYSPYKDS--DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
Y++ T+ + NG S +++ +H +GI L Q LL + LF++
Sbjct: 197 GSIYIIYTTDGTKKLNGNSTLNQGLKGITTYKEHFKKRHGIELGFEHQSLLHGRNLFKVE 256
Query: 944 NLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
N L + + + + DLPPE+C + + S S S +PSIMH LE LLVA
Sbjct: 257 NYLLKTRQKTEKGKNMSSV--DLPPEVCSVIMSPISIGTIYSFSFIPSIMHWLEGLLVAF 314
Query: 1004 ELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHD 1063
LK +L F ++ +L+A+T + C+E + + LE LGD++LKY V + LF +
Sbjct: 315 NLKRMLLDHFTPN-DIPISKVLQAITAKGCEEAYDYDYLETLGDSYLKYIVSQQLFKTNQ 373
Query: 1064 TVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETER 1123
EG L+ +R N ++N L K L +IR FDP Q+ G + I
Sbjct: 374 NDREGALSDKRKNIISNDVLFKYGCTRPLPGFIRKDKFDPKQWDVPGDKSNSILL----- 428
Query: 1124 TIHSQYDGRAPDDLNAEVRCSKGHHWLHKK------TIADVVEALVGAFIDDSGFKAATA 1177
L ++ S+ ++ K IADVVEAL+GAFI KAA +
Sbjct: 429 -------------LKQKLDSSRTRVYVRKTREIDLGIIADVVEALIGAFISTEDEKAALS 475
Query: 1178 FLKWIGIQVEFEASQVTNIC-ISSKSFLPLSASLDMATLEIL---LGHQFLHRGLLLQAF 1233
F+ WIGI V+ TNI ++ + + A ++ ++L L + F LL++A
Sbjct: 476 FINWIGINVD------TNIMPYENERHISIIAPEELVKAKLLKSRLNYSFKDPYLLVEAL 529
Query: 1234 VHPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYP--KLKPGQLTDLRSMLVNNQAF 1289
H S R + CY+RLEFLGDAVLDY+IT + Y Y K T++RS+ VNN+ +
Sbjct: 530 THSSGKRPEIRTCYERLEFLGDAVLDYVITMHFYKEYSNDKFSAEFFTNMRSISVNNECY 589
Query: 1290 ANVAVDQSFYKFLIFDS---NVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESS 1346
A A+ + ++ DS N +++T+ + + + E+ E C +VL D++ES
Sbjct: 590 ALSAIKAKLDEHILCDSVVKNNIAQTMEGVKNLSLESTFGWEL-ETYFC-QVLADVIESI 647
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQ-FPSLKKG 1405
GAI +DSG+ V++ + L+P++ + +PI EL ELC ++ +P ++
Sbjct: 648 AGAIFVDSGYKKEVVFQSIKPLLEPLVTPETARRHPISELHELCQKKGYKMKVYPPVRVN 707
Query: 1406 GK--FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
G+ E K G A A+N A ++A++ + ++K
Sbjct: 708 GETSVTIEVKTNGITYKNNPPAKASN--NDTARKLAAKDVLKQIK 750
>gi|320037410|gb|EFW19347.1| hypothetical protein CPSG_03731 [Coccidioides posadasii str.
Silveira]
Length = 1465
Score = 243 bits (619), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 198/646 (30%), Positives = 303/646 (46%), Gaps = 78/646 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQLEL +KA ++NII L TG GKT IAVLL L H+I KP +
Sbjct: 100 REYQLELFEKAKKDNIIAVLDTGSGKTLIAVLL---LKHIIEQELIDRSAEKPHR----- 151
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
+V LV QQA V++ +I +V FCG + L + WE+ + + V+V ++L C
Sbjct: 152 -VDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQC 210
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGK 228
L H F+KME I LLIFDE H+A K +HPYA+I+KDFY D K P+IFGMTASPV
Sbjct: 211 LLHAFVKMENINLLIFDEAHNA--KKDHPYARIVKDFYLKDGNAKRPKIFGMTASPV--- 265
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
A+ ++ K+ +LE LL++++ + + L V+ P V+ Y +
Sbjct: 266 --DAKVDVVKAARNLETLLNSQIATASNLSLLRQSVARPNEEVWSYDRL----------- 312
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL- 347
+Q E + ++ LR+ L L F L+ GA A ++
Sbjct: 313 -DQPFETRL-------------YKELRSRFGDLRALEKLFTFSLKASSNLGAWCADWVWS 358
Query: 348 --LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ + + E A + + + +E+ + I S ++
Sbjct: 359 YALTEESLPKLEGRAARTAMGNLPIAKIVRPEAEIQRIREASEIIRSHKFGDPAIRPELL 418
Query: 406 SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
S K+ RL +L F KCIVF + TAR L + + H GV G
Sbjct: 419 SPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSKIG-----TKHLRPGVLIG 473
Query: 465 LKSMSRNAMKSILEK-------FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
++S + M + FR GE+N L AT V EEGLDI C L++RFDL T+
Sbjct: 474 VRSDASGGMNISFRQQVLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQ 533
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--------EIMDRTSSDA 569
+IQSRGRAR S +A LV+ N + + + E+ M R I++ DA
Sbjct: 534 YIQSRGRARHMNSTFAHLVERDNFVHRESVNHLQSSEEIMKRFCISLPKDRILNSNDVDA 593
Query: 570 FTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH 627
+ + Y V ++GA ++ + +L + + L +++ + +Y+ +C
Sbjct: 594 LYEGDRNRKSYTVQTTGAKLTYNSSLVVLAHFANSLQYEKETSTVVSYYHRFTKNAFVCE 653
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
++LP +PI IVG P S AK+ A + L K G L+D+ +
Sbjct: 654 VVLPEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 699
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 159/357 (44%), Gaps = 56/357 (15%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ERLE LGD FLK A LF ++ DE + +R V N NL K A R L +IR Q
Sbjct: 1026 ERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEFIRSQ 1085
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
F ++ G T Q G ++ H L KTIADV
Sbjct: 1086 SFSRRGWYPEGL---------TLLQGKGQSKG-----------ATENKHALADKTIADVC 1125
Query: 1160 EALVGA--------FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF-LP--LSA 1208
EAL+GA D KA TA V + V N S+ + LP +A
Sbjct: 1126 EALIGACCLLASKNHRFDIAVKAVTAL-------VSSDDHNVLNWEQYSRLYSLPKYQTA 1178
Query: 1209 SLDMATLEIL------LGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYL 1259
+D A L++ LG+ F + LL AF HPS+ CYQRLEFLGDA+LD
Sbjct: 1179 VVDAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMA 1238
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY 1319
++Y +P P LT+ + +V+N+ +VAV + L S L I NYV+
Sbjct: 1239 CVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEE 1298
Query: 1320 MITPSSTREVKEGPRC-------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
+ ++ E + P PK L D+VE+ +GAI +DS F+ V + FL
Sbjct: 1299 I--EAAELESGDSPDAWTLTSDPPKCLPDMVEAYIGAIFIDSNFSFEVVEEFFQKFL 1353
>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1537
Score = 243 bits (619), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 225/741 (30%), Positives = 337/741 (45%), Gaps = 108/741 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ EL + FL +
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDS 186
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ +I V F G L W+K + + V+V +IL CL +
Sbjct: 187 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNS 246
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGKGASA 232
+++M+ I LLIFDE HHA K +HPYA+I++D ++K + PR+FGMTASP+ KG
Sbjct: 247 YVRMDQINLLIFDEAHHA--KKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG--- 301
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
++ ++ LE LD+++ + L VS P+ +V+ Y N + T +L
Sbjct: 302 --DITEAATRLETFLDSRIATTSKITLLREVVSRPIEKVWAY----NRLEPPFAT---EL 352
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD- 351
++ +Y K L ++ LG + A + L+ D
Sbjct: 353 YKLMDTRY---------------GNIKVLEGVYRFAWNASSELGKWCSDRAWWHALADDV 397
Query: 352 ----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF-- 405
E N+LIE+ NT+ ++ VF I R + E +K FF
Sbjct: 398 LPKLEGNINKLIES--NTM-------KAEHGAVFKDIIRIREAS------ETVKNYFFTD 442
Query: 406 -------SKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
S K+ RL LS F KCIVF + TA+ L+ + L + + R
Sbjct: 443 PELPGELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLN-IPNLRPGV 501
Query: 458 LVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+GV G + M+ + L KFR+GE+N L AT V EEGLDI C LVIRFDL T
Sbjct: 502 LIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRT 561
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT----- 565
+ ++QSRGRAR S YA +V+ N +K + E+ M R EI+ DR
Sbjct: 562 LIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHGND 621
Query: 566 -SSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D+F EE R + V S+GA ++ +++L RY S L +++ P+ +
Sbjct: 622 HDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVTIASN 681
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQ 675
+C +ILP +PI + G+P AK+ A L K L+ Y LP
Sbjct: 682 AYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNRLLDGYFNSIYHRRLPA 741
Query: 676 EDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFY--FMQFI 733
NA + + +++Y+ +L P++ W K + FY M +
Sbjct: 742 MRNA---KLAITCKRTNAYDM---------LLKPSI----WAKQRTTPTETFYGIHMSLL 785
Query: 734 PD-PADRIYREFGLFVKSLLP 753
P P R +R L + LP
Sbjct: 786 PSKPLSRDHRPILLLTREKLP 806
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 207/461 (44%), Gaps = 58/461 (12%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L+A+ + RNLL K+ E E F P L+I I S+ P
Sbjct: 979 QPVLQAELVRLRRNLLD--KMTTQEKEMQTECFICAEP----LRISALPPSIVSTCLAFP 1032
Query: 991 SIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+I+ RL++ L+A+E L +F + ++ + E + + ++ + + ER
Sbjct: 1033 AIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGK-NYER 1091
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE LGD FLK A LF + DE + R + N NL A + + YIR + F
Sbjct: 1092 LEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGF 1151
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G +H + D + ++ S+G H L +KTIADV EA
Sbjct: 1152 SRHIWYPDGLTL-----------LHGK-------DHSTKL-LSEGKHALGEKTIADVCEA 1192
Query: 1162 LVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD-- 1211
L+GA + G KA +A + +V +T + S D
Sbjct: 1193 LIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKYQTEKHRGSEDDL 1252
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGG----CYQRLEFLGDAVLDYLITSYLYSV 1267
+E LG+ F + LL A HPS G CYQRLEFLGD++LD + L+
Sbjct: 1253 ARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRR 1312
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
+P P L++ + +V+N+ ++V F++ ++ SN L I +YV+ + T +
Sbjct: 1313 FPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIETAQAES 1372
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
+ V + P PK L D+VE+ LGAI +DS F+ +
Sbjct: 1373 QGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSKFDFQVI 1411
>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1402
Score = 242 bits (618), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 378/1446 (26%), Positives = 607/1446 (41%), Gaps = 263/1446 (18%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQLE+ ++++++N+IV + TG GKT IA+L I A L + + FLAPTV L
Sbjct: 27 SRAYQLEMLRRSLKDNVIVAMDTGSGKTQIAILRIR--AQLESTSDQKVIWFLAPTVLLC 84
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ I+ I +R G S W+ ++ + +V Q+LL L H F+K
Sbjct: 85 AQQFDAIKLEIPSISMRLVVGSDNVHTWSSSTWKSLLNGTQAVVSTYQVLLDALDHAFVK 144
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYK--------PDIMKVPRIFGMTASPVVGK 228
++ ++LLIFDE H+ V SN P KIMK FY D P I G+TA+P
Sbjct: 145 LDRLSLLIFDEAHNC-VGSN-PGGKIMKHFYHYQGLRQDADDGSNRPAILGLTATP---- 198
Query: 229 GASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVIND-----TS 282
S +A++ K + LE +L+A S E+L V P +R+ + + S
Sbjct: 199 --SMKAHI-KGVEKLEQVLNAICVSPSLHREELLKHVKRPQLRIIECETAATEHFTETMS 255
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTK-----------QLNRLHDSMKFC 331
S + C++ +I + Y+ +L + +D +S R K QL+ L +
Sbjct: 256 SLHQECAKM--DILEDPYVVSLCAQ-NDDRSKRCLAKVLIDEKTWSRHQLSSLLSRSRII 312
Query: 332 LENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
+ LG A YI + ++N + ++ E + R I
Sbjct: 313 RQLLGPWAA--DFYIWKAKRSFLQN---------VKSTVPSLDGWVPEEKLYVAR---IL 358
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYILQNL-K 448
D++ +E P + +G+L + + I+FV TA L+ +L ++ K
Sbjct: 359 QDVAALEPAPRPIGYDSISDKVGLLLRELIMHKGDVTGIIFVQERATAAVLAALLHSIPK 418
Query: 449 FLASWRCHFLVGVN------AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+R +VG + A L + ++ L+ FR GE+NLLVAT V EEG+DI
Sbjct: 419 IRERYRVGCMVGTSHNHLRKASLYEVLDSSDCKTLQDFRRGEVNLLVATSVLEEGIDIPA 478
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE------LDLIKNFSK--EE 554
C LVI FD P+ SFIQ RGRARM S+ G+ D I+ + E
Sbjct: 479 CNLVICFDSPKNPKSFIQRRGRARMQDSQLIIFTHQGHSLTDHWAIFEDEIQKLCQDSER 538
Query: 555 DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP- 613
+R + ++R D C ++V +GA + L +C + E+ + +P
Sbjct: 539 ERQQLQTLERLDEDVDFC-----FRVPHTGARLDPENAKQHLEHFCRVISSQEYTDGRPD 593
Query: 614 ---KFYYFDDLGGTI--CHIILPANAPI---HQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
KF D + + LPA+ P H S A KDA +A L++
Sbjct: 594 YITKFTSGDHDHDQLVSAEVFLPASLPTKLRHFQSLRSWRSEANAMKDAAFQAYLALYQA 653
Query: 666 GALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAV-LRQSWTKSQYPVR 724
G +N LLP E N D E + + P + +W++ +
Sbjct: 654 GLVNKNLLPLETNIDFD-----------VESRAPIIPVEPLFDPWTEIASAWSQGDFRWT 702
Query: 725 LNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLK-VDLHLARGRSVMTKLV---PSGI 780
Y +QF AD FG++ LP E L+ +DL+L S M KLV P I
Sbjct: 703 ---YTVQF--QDADEAL--FGVY-NLTLPIELGPLRPIDLYL--DYSTMCKLVFSPPQRI 752
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRR 840
+ +Q D+ + +S+ L+ + + W +
Sbjct: 753 LTSQ------------------------ADEMADDTST----LIALHYCHRWDGWPM--- 781
Query: 841 CLSSPVFGTPGGSVDRKSLPSH-GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFE 899
T G V + L SH G L L++ + D +S V + + YL+ +
Sbjct: 782 --------TAGSHVIK--LTSHDGSLSLNDIGNQPFDANSSAVASGN----YLIRD---- 823
Query: 900 KNGYSPYK---DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLE-DSE 955
+ +P + D S V+ + + + P +P L R + LH ++ +++
Sbjct: 824 RRSKTPSRYIGDLSSKPPVEMVQKPFRYYADAPDEPYLNLMRWTRRSDFLHLIAVDPETQ 883
Query: 956 SHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPE 1015
++Y LP + I L+PSI+H +E +L+A +H LS + +
Sbjct: 884 RASQKQYITVLPVSFATVDSIHIKH--ARFGMLIPSIIHTIETMLIA---RH-LSVTLLK 937
Query: 1016 GAEVSAEMLLK-ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
E++ L++ A++ E + ERLE LGD+ LK+ + + EG LTR +
Sbjct: 938 PLELTDYSLVRDAISARSAYEPTNYERLEFLGDSILKFCASMQAGATNLSWPEGYLTRYK 997
Query: 1075 SNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF--FALGRRCPRICSKETERTIHSQYDGR 1132
V NS L + A L +I PF ++ F L TI
Sbjct: 998 DRLVANSRLSRAAVETGLAKFILTVPFTAQKWHPFFL-------------ETI------- 1037
Query: 1133 APDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLK-------WIG-- 1183
L+ +++ K + K +ADVVEALVG G A L WI
Sbjct: 1038 ----LSGKMKPFKKRE-MSTKVLADVVEALVGVAYIAGGIPKAIQCLSIFINECDWIDPS 1092
Query: 1184 -IQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NR 1240
+ EF A ++ C+ S S+L + LE L+G+ F + LLL+A H S+ +
Sbjct: 1093 ECREEFFACAPSH-CVDS-SYLHI--------LEELIGYSFTKKSLLLEATTHASYIGDI 1142
Query: 1241 LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ---- 1296
G ++RLEFLGDAVLDY+I S L + P L ++ +++ +VN A +++++
Sbjct: 1143 SGRSWERLEFLGDAVLDYMIVSKLMNRSPPLPHSRMHMIKTAMVNKDFLAFLSLEEHELS 1202
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSST---------------------REVKEGPRC 1335
F+ D VL+ + + I SS+ E+ G
Sbjct: 1203 QTESFVTEDGVVLTTNKRSALWRFIRHSSSGIGPAQLETAKRHENLRLEILHELHHGTHY 1262
Query: 1336 P----------KVLGDLVESSLGAILLDSGFNLNT----VWKI-MLSFLDPILKFSNLQL 1380
P K DL E+ +GAI +DSG +L T + +I ML +L+ +L S
Sbjct: 1263 PWHILLKQQASKFYSDLFEALVGAIWVDSG-SLATCDAFLRRIGMLPYLERVLADSLHMQ 1321
Query: 1381 NPIREL 1386
+P EL
Sbjct: 1322 HPKEEL 1327
>gi|168039661|ref|XP_001772315.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162676302|gb|EDQ62786.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 566
Score = 242 bits (617), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 253/455 (55%), Gaps = 30/455 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ+E ++A +E+IIVYL TGCGKTH+AV+L+ +A LIRKP I +FL P+V LVQ
Sbjct: 92 RGYQIEALERAKKEDIIVYLETGCGKTHVAVMLLQHIADLIRKPSTRIAVFLCPSVPLVQ 151
Query: 120 QQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQA+V++ FKV + G + + WE E++ E+ VM P ILL+ L+H F++M+
Sbjct: 152 QQARVVKRYTNFKVGEYYGEVNNNAWNSKAWEAELENTEIFVMTPAILLHNLHHCFMRMD 211
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASAQANL 236
I LLIFDECHHA S+HPYA IM++FY K D+ ++PRI GMTASP+ GK ++
Sbjct: 212 CIELLIFDECHHAH--SHHPYANIMQEFYHGKEDLYRLPRILGMTASPINGKVNCQGDSI 269
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
I+ +E +L AK+++V+++ +L+ V P + Y + C + L +++
Sbjct: 270 RTKIDKIERMLHAKLHTVKESSELDLVVPRPHHKSEYYESAQTPNPVTLKFC-QLLFDLQ 328
Query: 297 REQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
+E + L + + L + K + +L +S+ +C LG A A ILL
Sbjct: 329 KECIGTLLGTSGCEGELLGELCSGVEKKRVKNVKKLCNSLGYCATELGPRCAYEAVKILL 388
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQ-----ASEVFAAICRRDGIASDLSCIEVLKEP 403
++ + +++ D L + + + EV A C A+++ +
Sbjct: 389 HKYDSDCDPELDSNSEGKKDMLRKILNALNSFLSKEVEATSCAVPDGAANIQNL------ 442
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA-SWRCHFLVGVN 462
S K+ LI +L R M+CI+FV R +T R L+ +L +++ L+ ++R L G N
Sbjct: 443 --SSKVQLLINVLERCRDTNEMRCIIFVERKITTRVLASLLSSIEVLSPAFRFQSLAGKN 500
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLL--VATKVGE 495
+G M+ ++++E FR+GE+ ++ VA K+ E
Sbjct: 501 SGSNDMNHKHQQNVVESFRNGEVGIIGVVAAKLCE 535
>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1525
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 305/648 (47%), Gaps = 79/648 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL ++A +N I L TG GKT IAVLL+ EL + I FL +
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ ++ V F G L S W++ + V+V +IL CL +
Sbjct: 178 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASA 232
+IKM I +LIFDE HH K +HPYA+I++D Y ++ K PRIFGMTASP+ KG
Sbjct: 238 YIKMSQINILIFDEAHH--TKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG--- 292
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY------- 285
++ LE LLD+++ + + L PV RV+ + + ++S
Sbjct: 293 --DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDR 350
Query: 286 ---VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGAL 341
+ C E + Q S L R D R L +L S++ +
Sbjct: 351 FGDMACLEGIFRFAW-QASSELGRWCSDRAWARALADDVLPKLEGSVRKTANSETSSNVP 409
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
++Y E +R E + I S +A + E F + + ++VL+
Sbjct: 410 ESAY-----KEILRI----TEASEIVKS---YAFSSPETFGQLSPK---------VQVLR 448
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ--NLKFLASWRCHFLV 459
E +L R G Q KCIVF + TA L+ + Q N+ FL R L+
Sbjct: 449 E-----ELARYFG------RQTETKCIVFTQKRYTALILAELFQTLNIPFL---RPGVLI 494
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV AG+ R S++ KFR+GE+N L AT V EEGLDI C LV+RFDL +T+
Sbjct: 495 GVRSGDLAGMNITFRQQFISLV-KFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTL 553
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGN----QREL-----DLIKNFSKE--EDRMNREIMDR 564
++QSRGRAR S YA +V+ GN QR L +++++F + EDR+
Sbjct: 554 IQYVQSRGRARHFNSTYASMVERGNLEHEQRLLEVQDAEMMQSFCRTLPEDRLLYGFDHD 613
Query: 565 TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
+ R +++ S+GA ++ ++L RY S L +++ F+ + + G
Sbjct: 614 LDTVLQKDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGAF 673
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+C +ILP +PI + G+P AK+ A L K L+D+
Sbjct: 674 VCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHF 721
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 207/476 (43%), Gaps = 57/476 (11%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
H QP+LRA+ + RNLL K+ D+E F + P LK+ S
Sbjct: 966 HWDQPVLRAELVRLRRNLLD--KMTDTERDVETRCFICIEP----LKVSAIPASTAFSCL 1019
Query: 988 LLPSIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFS 1038
P+I+ R++ L++++ L+ +F + ++ + E + + ++ R +
Sbjct: 1020 AFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGR-N 1078
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD FLK A LF + DE + R + N NL A + YIR
Sbjct: 1079 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1138
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ F ++ G + + K+ R ++ H L +KTIADV
Sbjct: 1139 RGFSRHTWYPEGLKL--LQGKDHSRKA-----------------TTESKHALAEKTIADV 1179
Query: 1159 VEALVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSAS 1209
EAL+GA + G KA T + + E ++ I + A
Sbjct: 1180 CEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQRRAADGAE 1239
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLY 1265
L ++ +E L ++F + LL AF HPS+ CYQRLEFLGD+++D + L+
Sbjct: 1240 LYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLF 1299
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
+ +P P LT+ + +V+N+ +AV + L + S L I Y + + T
Sbjct: 1300 ARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEG 1359
Query: 1326 TRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
E V + P PK L D+VE+ +GA+ +DS FN + + ++ P +
Sbjct: 1360 ESEGAVDYWTVTKDP--PKCLPDMVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFE 1413
>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
Length = 1493
Score = 241 bits (616), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 203/649 (31%), Positives = 305/649 (46%), Gaps = 80/649 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL ++A +N I L TG GKT IAVLL+ EL + I FL +
Sbjct: 85 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 144
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ ++ V F G L S W++ + V+V +IL CL +
Sbjct: 145 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 204
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASA 232
+IKM I +LIFDE HH K +HPYA+I++D Y ++ K PRIFGMTASP+ KG
Sbjct: 205 YIKMSQINILIFDEAHH--TKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG--- 259
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY------- 285
++ LE LLD+++ + + L PV RV+ + + ++S
Sbjct: 260 --DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDR 317
Query: 286 ---VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGAL 341
+ C E + Q S L R D R L +L S++ +
Sbjct: 318 FGDMACLEGIFRFAW-QASSELGRWCSDRAWARALADDVLPKLEGSVRKTANSETSSNVP 376
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
++Y E +R E + I S +A + E F + + ++VL+
Sbjct: 377 ESAY-----KEILRI----TEASEIVKS---YAFSSPETFGQLSPK---------VQVLR 415
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ--NLKFLASWRCHFLV 459
E +L R G Q KCIVF + TA L+ + Q N+ FL R L+
Sbjct: 416 E-----ELARYFG------RQTETKCIVFTQKRYTALILAELFQTLNIPFL---RPGVLI 461
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV AG+ R S++ KFR+GE+N L AT V EEGLDI C LV+RFDL +T+
Sbjct: 462 GVRSGDLAGMNITFRQQFISLV-KFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTL 520
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGN----QRELD------LIKNFSKE--EDRMNREIMD 563
++QSRGRAR S YA +V+ GN QR L+ ++++F + EDR+
Sbjct: 521 IQYVQSRGRARHFNSTYASMVERGNLEHEQRLLEVQDAEKMMQSFCRTLPEDRLLYGFDH 580
Query: 564 RTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG 623
+ R +++ S+GA ++ ++L RY S L +++ F+ + + G
Sbjct: 581 DLDTVLQKDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGA 640
Query: 624 TICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+C +ILP +PI + G+P AK+ A L K L+D+
Sbjct: 641 FVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHF 689
Score = 130 bits (327), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 207/476 (43%), Gaps = 57/476 (11%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
H QP+LRA+ + RNLL K+ D+E F + P LK+ S
Sbjct: 934 HWDQPVLRAELVRLRRNLLD--KMTDTERDVETRCFICIEP----LKVSAIPASTAFSCL 987
Query: 988 LLPSIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFS 1038
P+I+ R++ L++++ L+ +F + ++ + E + + ++ R +
Sbjct: 988 AFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGR-N 1046
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD FLK A LF + DE + R + N NL A + YIR
Sbjct: 1047 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1106
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ F ++ G + + K+ R ++ H L +KTIADV
Sbjct: 1107 RGFSRHTWYPEGLKL--LQGKDHSRKA-----------------TTESKHALAEKTIADV 1147
Query: 1159 VEALVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSAS 1209
EAL+GA + G KA T + + E ++ I + A
Sbjct: 1148 CEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQRRAADGAE 1207
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLY 1265
L ++ +E L ++F + LL AF HPS+ CYQRLEFLGD+++D + L+
Sbjct: 1208 LYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLF 1267
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
+ +P P LT+ + +V+N+ +AV + L + S L I Y + + T
Sbjct: 1268 ARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEG 1327
Query: 1326 TRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
E V + P PK L D+VE+ +GA+ +DS FN + + ++ P +
Sbjct: 1328 ESEGAVDYWTVTKDP--PKCLPDMVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFE 1381
>gi|327297344|ref|XP_003233366.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
gi|326464672|gb|EGD90125.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
Length = 1519
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 231/762 (30%), Positives = 349/762 (45%), Gaps = 116/762 (15%)
Query: 26 AVVEECSVAVSGVGFGAESSVGAQKTDKDPKQI---ARKYQLELCKKAMEENIIVYLGTG 82
A+ EE AV V + S+ +D I R+YQLEL +K+ E+NII L TG
Sbjct: 75 AITEEDVKAVIKVTDDTQLSMTNIIAKQDYTSIIHDPREYQLELFEKSKEKNIIAVLETG 134
Query: 83 CGKTHIAVLLIYELAHLIRK---------PQKSICIFLAPTVALVQQQAKVIEESIGFKV 133
GKT IAVLL L H+I + P + I FL +V LV QQA V++ +I K+
Sbjct: 135 SGKTLIAVLL---LKHVIEQELTDRSLGLPPR-ISFFLVDSVTLVYQQAAVLQNNIPQKI 190
Query: 134 RTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQ 192
FCG + L + WE + V+V ++L CL H FI+++ I LLIFDE HHA
Sbjct: 191 DKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSFIQIDQINLLIFDEAHHA- 249
Query: 193 VKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVY 252
K HPYA+I+KDFY + + P+IFGMTASPV A+ + + +LE +LD+++
Sbjct: 250 -KKEHPYARIIKDFYLKEPERKPKIFGMTASPV-----DAKVEVVGAAKTLEAMLDSQIT 303
Query: 253 SVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQ 312
+ + L V+ P +++Y + E+ E + L RKL
Sbjct: 304 TASNPALLRQSVTRPTEEIWEYDRL----------------ELPFE---TPLYRKL---- 340
Query: 313 SLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL--LSGDETMRNELIEAEGN------ 364
R + L KF E G+ + +I +ET+ +EA N
Sbjct: 341 --RQKFGDIKVLEKIFKFSRETSSSLGSWCSDWIWSYCLSEETLPK--LEARSNRPLMKS 396
Query: 365 TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQH 424
+ C ++ AI + ++ E+L K LL +L F+
Sbjct: 397 IPNQPSCDTEAERIREAGAIIKEHEFGDPVANPELLSR----KVLLLRDQLLRRFKENPD 452
Query: 425 MKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVNAG-----LKSMSRNAMKSIL 477
+CIVF + TAR L + + + +++ R + LVGV +G L R +++
Sbjct: 453 TRCIVFTAQRHTARILRDLFKKIGSQYI---RPNLLVGVRSGGDKIGLDISFREQFLNVI 509
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
FR GE+N L AT V EEGLDIQ C L++RFDL T+ +IQSRGRAR +S +A +V+
Sbjct: 510 -AFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVE 568
Query: 538 SGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-------------------Y 578
N L+ + EE R + E++ R + E+R+ Y
Sbjct: 569 RNN-----LMHETAVEEVRRSEEVLTRFCK---SLPEDRLLKGTGDIDMMIEKDRQQKSY 620
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQ 638
+ S+GA ++ +++L Y S L +++ + + + G IC ILP +PI
Sbjct: 621 TIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYIIHPKDGAFICETILPEKSPIRG 680
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNA----TEDEPMLF 687
+G S AK+ A + L K L++Y LP NA T + +
Sbjct: 681 CMGKSASRKLLAKQSAAFETCLLLRKNRLLDEYFISTYHKRLPVMRNARLAITSKKSNKY 740
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLR----QSWTKSQYPVRL 725
S S E SRGE +L VL Q +S +P+ L
Sbjct: 741 SMISKPAAWELSRGESPTILYATVLSLSDCQKLQRSYHPIVL 782
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 216/476 (45%), Gaps = 75/476 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSSLSL 988
QP+LR++ + RN L E+ +S ++ Y +C LKI S + + + +
Sbjct: 963 QPVLRSELIQLRRNFLDID--ENPKSPPVDYY-------VCAEALKISAISVPLATQIFV 1013
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQE------RF--- 1037
P+++ R+E+ L+A+E L P E+ L+ALT +E +E RF
Sbjct: 1014 FPAMIWRMESYLIALEACENLQLKIP------PELALEALTKDSENTEEHGMEQIRFQSG 1067
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ ERLE LGD FLK A LF ++ DE + +R + N NL A +
Sbjct: 1068 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAINLEIFK 1127
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR + F ++ G + + P+ H L KT
Sbjct: 1128 FIRSRSFSRRAWYPEGLTL-----------LKGKDKKEGPNG---------PEHALADKT 1167
Query: 1155 IADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
IADV EAL+GA + D KA T F+ +VE A + +
Sbjct: 1168 IADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSRLYSLPNYQTASA 1227
Query: 1207 SAS-LDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLIT 1261
SAS +D+A ++ LG+ F + LL AF+HPS+ CYQRLEFLGD++LD +
Sbjct: 1228 SASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDSLLDMVCV 1287
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++L+ YP P LT+ + +V+N+ ++AV + + LI SN L I +Y + +
Sbjct: 1288 NHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQ 1347
Query: 1322 TPSSTRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
E E P+C L D+VE+ LGAI +DS FN + V F+
Sbjct: 1348 AMKIKMEGNLEAWTYTNEPPKC---LPDIVEAYLGAIFVDSNFNFDVVDDFFRKFI 1400
>gi|171690380|ref|XP_001910115.1| hypothetical protein [Podospora anserina S mat+]
gi|170945138|emb|CAP71249.1| unnamed protein product [Podospora anserina S mat+]
Length = 1568
Score = 241 bits (614), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 206/653 (31%), Positives = 297/653 (45%), Gaps = 79/653 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL ++A +N I L TG GKT IA LL+ EL + + K I FL
Sbjct: 125 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELENRFQGQPKRIAFFLVDK 184
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
VALV QQ V+ ++ + V FCG S WE + +V +IL CL+H +
Sbjct: 185 VALVFQQHAVLTCNLDYSVAKFCGQMLDRSSAEFWETTFQENMAIVCTSEILYQCLHHSY 244
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASA 232
I+M+ I LLIFDECHH K NHPYA+I+KDFY D PRI GMTASPV A
Sbjct: 245 IRMDQINLLIFDECHH--TKKNHPYARIIKDFYIQNEDNEARPRILGMTASPV-----DA 297
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP---VVRVYQYGPVINDTSSSYVTCS 289
Q + + LE LL +++ +V D ++ +S P +V Y P
Sbjct: 298 QIDPRIAAAELEGLLHSQIATVSDPTIIQHTISCPKEEIVLEYDRRP------------- 344
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS--YIL 347
Q+ + L HQS++ + + F + G A + L
Sbjct: 345 --------RQWTTPL------HQSIKALVGNHDYFTKAFVFTSQATAELGPWCADRYWQL 390
Query: 348 LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP---- 403
E + +AE SL R + S++ R A +L ++P
Sbjct: 391 FFNQEDIAKLETQAER-----SLLRQGA-FSQLMGLDKNRVREAHELVKNHEFEQPILDT 444
Query: 404 -FFSKKLLRLIGILSTFRLQQHM--KCIVFVNRIVTARALSYILQNLKF-LASWRCHFLV 459
FS K++ L L Q + +CIVFV + TA L +L+ + + L+
Sbjct: 445 RLFSSKVIELWKTLHDQFSSQDLVRRCIVFVKQRNTANILVDLLKQPELKIPGLEPGILI 504
Query: 460 GVN------AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
G K+ R+ + +I+ KF+ GELN + AT V EEGLDI C ++IRFDL +
Sbjct: 505 GGGRNDSSWESSKTSYRDQVLTII-KFKKGELNCIFATSVAEEGLDIPDCNIIIRFDLYD 563
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIMDRTSS---- 567
T+ +IQSRGRAR +S Y +++ GN +L +K + ED + + E M T
Sbjct: 564 TLIQYIQSRGRARQEKSTYIHMIERGNSEQLQKMKQLKQSEDGLRKFCEAMPDTRKLTGN 623
Query: 568 ----DAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL 621
D F E +R Y V +GA ++ + L + S LPH N P++
Sbjct: 624 NFKMDYFLRKEKGQRQYTVPETGAKLNYKQSLICLANFVSSLPHPPETNLTPEYTVNTTE 683
Query: 622 GGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
GG C +ILPA +PI +G S AK A + L + L+ +L P
Sbjct: 684 GGFQCEVILPAISPIRSAIGKVHGSKAVAKCSAAFEMCLQLVRGNYLDTHLRP 736
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 212/490 (43%), Gaps = 85/490 (17%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
Q ++ A+ L RNLL + LE E+ E ++ F L P LKI + + P
Sbjct: 987 QAVVEAELLSTQRNLLDD-SLE-GENLEPKQCFLVLEP----LKISPLPVQVVAMAYNFP 1040
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL----- 1039
I+HR+++ LVA++ ++L G + ++ L+A T E+ E+ +
Sbjct: 1041 VIIHRVDSNLVALDACNML------GLNIRPDLALEAFTKDSDNTDEQDVEQVNFQRGMG 1094
Query: 1040 ---ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGDAFLK A ++ L DE E R + N NL A L+ YI
Sbjct: 1095 NNYERLEFLGDAFLKMATTIAIYTLIPDKDEFEYHVERMVLICNRNLFNNALEVKLEEYI 1154
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R F+ ++ G R K+ + H L K+IA
Sbjct: 1155 RSMAFNRRTWYPEGLTLKRGKRKDIRKK-----------------------HVLADKSIA 1191
Query: 1157 DVVEALVGA-FID-------DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL-S 1207
DV EA++GA ++ D +A T + ++ + + +P S
Sbjct: 1192 DVCEAIIGAAYLTAQEAGNFDMAIQAVTRMVNDKNHTMQTWSDYYAVYKKPAWQTMPTNS 1251
Query: 1208 ASLDMA-TLEILLGHQFLHRGLLLQAFVHP----SFNRLGGCYQRLEFLGDAVLDYLITS 1262
DMA +G++F + LL AF HP S+ +L YQRLEFLGDA+LD
Sbjct: 1252 VQEDMAEKFHKRMGYRFQYPRLLRSAFQHPTYPTSWEKLPS-YQRLEFLGDALLDMACID 1310
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---DY 1319
+L+ +P P LT+ + +V+NQ +AV F++ L S + I +YV +
Sbjct: 1311 HLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYIGFHRSLQHSSPAVQSEIASYVTEIEE 1370
Query: 1320 MITPSSTREVKEG--------------PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
+ + V+EG R PK L D +E+ +GAI +DS ++ TV
Sbjct: 1371 ALAAAKAAAVQEGKSESNFARDFWVDCSRPPKCLPDTIEAYVGAIFVDSSYDYQTV---- 1426
Query: 1366 LSFLDPILKF 1375
F D ++F
Sbjct: 1427 QDFFDKHIQF 1436
>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
Length = 1725
Score = 240 bits (613), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 200/675 (29%), Positives = 310/675 (45%), Gaps = 85/675 (12%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R+YQ E+ +A N+I L TG GKT+I+ LLI ++ K I +FL P VAL
Sbjct: 13 LPRRYQEEIFARAQRSNVIAALDTGSGKTYISTLLIKWISTKDAGLGK-IIVFLVPKVAL 71
Query: 118 VQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V QQ I + +VR +CG + L W+ E++ +V VM QI L L H
Sbjct: 72 VDQQGDFIAKQTPLRVRKYCGATAIDLADRTTWKAELEGADVFVMTAQIFLNLLTHSLWS 131
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
++ ++L++FDECHH + NH Y IM+++++ + P+IFGMTASP+ + +
Sbjct: 132 LDRVSLMVFDECHH--TRKNHAYNGIMREYFQGSSDRRPKIFGMTASPIWNPKDAVE--- 186
Query: 237 PKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
S+ +LE LDAKV +V + ++L P ++QY +
Sbjct: 187 --SLATLERNLDAKVIAVRQHVDELMDHSPRPQELLHQYPAPL----------------- 227
Query: 296 KREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE----NLGVCGA----------- 340
E Y + S+ L D L+ +++ D ++ E +LG GA
Sbjct: 228 --ESYPAYHSKTLWDRLDLQRIPPEIDIPVDKIRTRYEVTYASLGPYGAELYLYNDIKQR 285
Query: 341 -LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS------D 393
+ DE + L E G DD+L ++ RDG+A D
Sbjct: 286 IIQMQNTTSGMDEYLALNLAELNG---DDALTAISADIPLPKEVEDLRDGLAEFKSFFED 342
Query: 394 LSCIEVLKEP----FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+ EV+ + S K+ LI IL + + IVFV + A LS IL +
Sbjct: 343 ENGSEVIPTTVHLKWCSPKVRELIDILFA-HYTSNFQGIVFVEQRHVAACLSKILPRVPQ 401
Query: 450 LASW-RCHFLVG------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
L+ + L+G K M+ + I++ FR ++NLL+AT V EEGLD
Sbjct: 402 LSHLIKTGQLIGHGTTNLAKMQTKGMALRTQQDIVKLFRERKINLLIATSVAEEGLDFPA 461
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM 562
C LVIRFD + + ++QSRGRAR S++ +V G++ L KNFS+ E +
Sbjct: 462 CDLVIRFDPLQHMVGYLQSRGRARHRSSKFIIMVQEGHENHLSRYKNFSESEPHLRLVYQ 521
Query: 563 DRTSSDAFT-----------CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
R D +E Y V S+GA ++ V LL+ CS +PHD+ + P
Sbjct: 522 TRGDRDDIDEDEEERDDPADLAERERYVVLSTGAVLTYNSAVGLLNHLCSLIPHDK-YTP 580
Query: 612 KPKFYYFDDLGGTICHIILPANAPIH----QIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
Y D T+ LP++ P+ +G + S + AK+ A++ LH+LG
Sbjct: 581 THLPRYTGDFTSTLQ---LPSSLPLTPADLSFMGPEKRSKKEAKRAVAFLAVKRLHELGV 637
Query: 668 LNDYLLPQEDNATED 682
+DYLLP + + D
Sbjct: 638 FDDYLLPAQSSGVAD 652
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 205/427 (48%), Gaps = 56/427 (13%)
Query: 978 FSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERF 1037
FS+ + + +LP + HR+ ++ A + + P + ++L++ALT F
Sbjct: 910 FSEGVRDAFHVLPELCHRITDVYRAHAAR--VELGLPP---ILDDLLIQALTIPSANAGF 964
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ +RLE LGD+ LK HLF EG+L R N+V+N LL A L+ Y+
Sbjct: 965 NNQRLETLGDSVLKLTTVVHLFNRFPFRHEGQLDTLRRNSVSNRTLLARAKEVGLEEYLS 1024
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK-GHHWLHKKTIA 1156
C ++ R +Y A DD + V + H ++++
Sbjct: 1025 -------------------CESQSMRVW--RYTLAAEDDPSWSVEPRRRAHRVFPRRSLQ 1063
Query: 1157 DVVEALVGAFIDDSG----FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
D +EA +GA G +A TA +G + ++ CI P+SA +
Sbjct: 1064 DCMEATLGAAFTTGGMGMALRAGTALGLSLGGPLPWDIRY--GGCIPKS---PVSALFTL 1118
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
L+ LG++F LLL+A HPSFN YQRLEFLGDAV+D + YLY+ +P+
Sbjct: 1119 --LQESLGYRFRSGRLLLEAMTHPSFNSFETSSYQRLEFLGDAVVDLAVMRYLYNKFPQA 1176
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREV- 1329
GQL+ RS V + A+VAV + +K L+ ++ LS INNYV + S+ +
Sbjct: 1177 TSGQLSWARSRAVCAPSLASVAVKRLGLHKLLLVNNVELSIAINNYVPILEELSNEELIH 1236
Query: 1330 ---KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK------FSNLQL 1380
K+ P PK + D++ES LGA+L+DS +N W+I S + ++ NL
Sbjct: 1237 NAWKQDP--PKAISDVMESVLGAVLVDSDYN----WEIACSVSEMVMGDLLVVLSPNLPR 1290
Query: 1381 NPIRELL 1387
+PI EL+
Sbjct: 1291 DPISELM 1297
>gi|157167186|ref|XP_001652212.1| dicer-1 [Aedes aegypti]
gi|108877338|gb|EAT41563.1| AAEL006794-PA [Aedes aegypti]
Length = 1658
Score = 240 bits (612), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 271/1028 (26%), Positives = 463/1028 (45%), Gaps = 124/1028 (12%)
Query: 55 PKQ---IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SIC 108
P+Q I R YQ + M++N I+YL TG GKTHIA+++I E+ + KP
Sbjct: 6 PQQDDFIPRDYQRTMKTICMQKNTIIYLPTGAGKTHIALMVIKEMGKDLDKPLTEGGKRT 65
Query: 109 IFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILL 167
F+ TVAL +QQA+ + ++ + + D W +E +Y+V+V QILL
Sbjct: 66 FFVVNTVALAKQQAEFLSHNLTYDTSIYTSDRNVDAWKQDKWLEEFAKYQVIVCTCQILL 125
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
L H ++ ++ I LLIFDECHH HP IM+ F + PR+ G++ ++
Sbjct: 126 DVLKHGYLSVKHINLLIFDECHHGV--GEHPMHGIMEQFLRVPKSDHPRVIGLSGM-LLY 182
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAE---DLESFVSSPVVRVYQYG-----PVIN 279
K + A + + LEN +A + +V + ++ F + P + Y PV+
Sbjct: 183 KQIKSVALVSPELERLENTFNATIATVGSYDAFTEVCKFSTDPNELLVSYSTLRLSPVMA 242
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
D ++ S+ + E +Y++ L D K++ +L + + L + G+ G
Sbjct: 243 DIVNNINAFSQTIEEFHLPKYLNQNKALLKDRPK---PLKEIRKLFTELIYQLGDTGLFG 299
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DGIASDLSCI 397
A L+ E + D S+ R A ++ F R + + S L
Sbjct: 300 GSIALLGLIVQ--------FELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDMK 351
Query: 398 EVLKEPFFSKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR 454
L + F S K+ +LI L + K ++FV R +A+ L ++L+ + F +
Sbjct: 352 TKLTK-FSSLKVRQLIDQLEKLYEENRDKKAKTLIFVQRRFSAKVLYHLLK-IYFAETED 409
Query: 455 CH-----FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ F+VG N + + +S + +LE+F+ E N++V T V EEG+D+Q C
Sbjct: 410 ANLIVPDFMVGNNGSMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQMCN 469
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE-LDLIKNFSKEEDRMNREIMD 563
V+++D P+T AS+ QS+GRARM S+Y ++D+ N+ L+ + + E+ + R ++
Sbjct: 470 TVVKYDHPQTFASYQQSKGRARMKNSQYMVMLDNENRHIFLEKYRLYKSIEEELRRCLIG 529
Query: 564 RTSS-----DAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
+T + DA E +Y + GA + A + LL+RYC +P D F N
Sbjct: 530 KTINRPDPLDADVHKE--LYNEIIPPFFTAKGAKLDALSAIQLLNRYCMGMPRDAFTNTN 587
Query: 613 PKFYYFD-DLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
+ D G I ++LP + + + I G P +++ AK+ A A L++ LN+
Sbjct: 588 VTWERIDLKDGRIIVEVLLPLQSTVREKISGNPMRNIKLAKRSAAFNACRKLYENKELNE 647
Query: 671 YLLP----QEDNATEDEPMLFSSDSDSYEGE--GSRG--ELHEMLVPAVLRQSWTKSQYP 722
+L+P + N +D D D+ G+ G++ H + P + + + P
Sbjct: 648 HLIPIDCKYQLNNLKDVYFRHWKDFDADLGKLAGTQKCIRTHAIQYPKQTTECFPQPGKP 707
Query: 723 VRLNFYFMQ----FIPDPAD-------RIY---REFGLFVKSLLPGEAE-HLKVDLHLAR 767
+ Y ++ F DP + +Y FGL LP A+ V L L
Sbjct: 708 CYI--YVLRIAAGFAQDPTNDNVNIFHSLYSSENNFGLMTTKPLPALAKMKFFVTLGLIN 765
Query: 768 GRSVMTKLV-PSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLL 824
T +V P+G ++ ++ + V D + EF+ DY +S +L++
Sbjct: 766 VHIEETPIVLPNGGSEIELALLRQFHVTVFRDVLKLWKEFLCC---DYDNEENS--FLVV 820
Query: 825 PVIFHKNS--VDWKIIR--RCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
P+ KNS +DWK+IR + LS P PS N E+D
Sbjct: 821 PL---KNSTHLDWKLIREFQNLSEP--------------PSEISTIARNKMEFEADKYRH 863
Query: 881 LV----YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRA 936
V Y +K+ Y+VT + SP+ + + S+ ++ +Y + + P Q L+
Sbjct: 864 KVILPWYKNNKEQPYVVTMVHEHLTPESPFPNPEYGSYANYFSQAYHLAVVKPDQFLIEV 923
Query: 937 KPLFRLRNLLHNRKLEDSESHELEEY-FDD-LPPELCQLKIIGFSKDIGSSLSLLPSIMH 994
K + N L+ +D +S + + F++ L PELC F D +LLPS +H
Sbjct: 924 KGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPELCH--NYQFPADYWLKATLLPSALH 981
Query: 995 RLENLLVA 1002
RL LL+A
Sbjct: 982 RLHYLLLA 989
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 216/443 (48%), Gaps = 56/443 (12%)
Query: 1002 AIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLL 1061
AI+L L A+ + + ++KALTT+ + F LER E+LGDAFLK+++ +L
Sbjct: 1154 AIKLLQLTPAN-TVNVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKY 1212
Query: 1062 HDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG-RRCPRICSKE 1120
H EG LT + V+N NL+ A + L ++ FDP + P+ +
Sbjct: 1213 HKEWHEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIKRT 1272
Query: 1121 TERTIHSQ-----------------YDGRAPDDLNAEVRC-------SKGHHWLHKKTI- 1155
+ HS + DD A++ S ++L ++T+
Sbjct: 1273 MQSVNHSARVLYRLTLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMG 1332
Query: 1156 ----ADVVEALVGAFIDDSGFKAATAFLKWIGI------QVEFEASQVTNICISSK-SFL 1204
AD +EAL+G + G + + L GI ++ A ++ N + +
Sbjct: 1333 DKTPADAMEALLGVCVQSVGIERSFKLLPHFGILPKTHNVLKLLADKIENQRLKTHIDIR 1392
Query: 1205 PLSASL-DMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLIT 1261
+ A L + +E +LG++F R LLQA H S+ NR+ G YQ+LEFLGDAVLD+LI+
Sbjct: 1393 EVDAFLKNYRRIESILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLIS 1452
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-- 1319
Y++ P + PGQLTDLRS LVNN A + V + +++ +S ++T++ +V +
Sbjct: 1453 MYIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQE 1512
Query: 1320 -----------MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSF 1368
++ S R++ E PK LGD+ ES + A+ LDSG + W+++
Sbjct: 1513 QNKHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGM 1572
Query: 1369 L-DPILKFS-NLQLNPIRELLEL 1389
+ + IL F+ N + +R+L E
Sbjct: 1573 MGNEILTFTENTPIQIVRQLYEF 1595
>gi|260831340|ref|XP_002610617.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
gi|229295984|gb|EEN66627.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
Length = 1760
Score = 240 bits (612), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 286/1100 (26%), Positives = 454/1100 (41%), Gaps = 187/1100 (17%)
Query: 53 KDPKQIA----RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS-- 106
++P+ ++ R YQ+EL A+E+N IV LGTG GKT +AV+LI EL+ R
Sbjct: 2 REPQHLSIFTPRLYQMELLDAALEKNTIVCLGTGSGKTFVAVMLIKELSSQTRAALSDGG 61
Query: 107 -ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQ 164
FL V LV QQA VI + + G L + W++E D + VLVM Q
Sbjct: 62 KRTFFLVNNVPLVSQQAAVITTHTNLSIGEYVGAMGVDLWTRDRWQQEFDTHHVLVMTAQ 121
Query: 165 ILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASP 224
I L L H F+ + + LLI DECHHA +HPY +IMK F + PR+ G+TAS
Sbjct: 122 IFLDILQHGFLPLSKVNLLIIDECHHA--VGHHPYREIMKTFDTCQVQDYPRVLGLTAS- 178
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
+ +G A +L + + +LE L + + D ++ + + P V + GP N+ S
Sbjct: 179 -ILQGKCAPDSLFQRVRNLEVTLRSSAETATDLVGVDRYTTQPNEVVIESGPAQNEPGLS 237
Query: 285 ---YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGAL 341
+ LA +IS+ ++ + R+ + + + LE LG
Sbjct: 238 QALQTLVDDALA------FISSCKVRVSVEEGERDPCQVPKQAIQECRAILEVLGTWATR 291
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
A+ ++ E +LI+ E + R+ +C D D+ ++V
Sbjct: 292 RAAILINRELE----KLIKHEWSEQHQLFLRWVHTVMHHVHLLC--DEAFKDVEDVDVQ- 344
Query: 402 EPFFSKKLLRLIGIL----------------STFRLQQHMKC------------------ 427
F + K+ RL+ +L S + H
Sbjct: 345 --FVTPKVRRLLEVLRECKPNEVQSDNSKSVSNMNSKNHYHSSRRRDNLDNQDPNTSFQL 402
Query: 428 --IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNA-GLKS----MSRNAM 473
IVFV R TA L+ +LQ +L +++S C G+++ G++S M+
Sbjct: 403 CGIVFVERRYTAVVLNKLLQEFAKSDPDLAYISS-SCITGHGLSSRGMRSRETEMAFRRQ 461
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+ IL +FR E NLL+ T V EEG+D+ C LV+RFDLP+ S++QS+GRAR S Y
Sbjct: 462 EEILRRFRMHENNLLIGTSVVEEGVDVPKCNLVVRFDLPKDYRSYVQSKGRARAQGSHYV 521
Query: 534 FLVDSGNQRELD---------------LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY 578
LV Q ELD L + +++ E EI + D R
Sbjct: 522 MLV---QQHELDSFKEDLVQFKGIEKILRQKWAEHEVPKEEEIWEHLCDDMVPPYMPR-- 576
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGT--ICHIILPANA 634
+VD G ++ + L++RYCSKLP D F PK + D G + + LP N+
Sbjct: 577 QVD-GGPRVTMTSAIGLVNRYCSKLPSDVFTHLTPKSRVDSVSDADGNKYMATLYLPINS 635
Query: 635 PIHQIVGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFS 688
+ + P + A+K LKA + LH+ G L+D LLP +E +
Sbjct: 636 SLRDPIQGPVMPTRRLAEKAVALKACQLLHQAGELDDNLLPVGKEVIHYEEEEEEFEVED 695
Query: 689 SDSDSYEGEGSRGELHEMLVPAVLRQSW---TKSQYPVRLNFYFMQFIPD---------- 735
SD + G R ++++ +P +QS S Y +N + +P+
Sbjct: 696 SDGHARPGTTKRHQVYKKQIPKAFQQSLPVPAASCYLYIINMVLTEPLPEELNIRGRKLH 755
Query: 736 PADRIYREFGLFVKSLLP-----------GE--------AEHLKVDLHLARGRSVMTKLV 776
P + R FGL +P GE A + VD + R V
Sbjct: 756 PPEATTRCFGLLTSKHVPQIPCFPVYTRSGEVSISLRLCASGINVDQNQLRLVQNFHGYV 815
Query: 777 PSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWK 836
S +++ ++ ++ L F VPL K +++ F +D+
Sbjct: 816 FSHVLRLEKKPLYYVPADLQSWYF---VVPLNKGLLADNADQLF------------IDFN 860
Query: 837 IIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
+ S P S D P + ++ V S A + FY V I
Sbjct: 861 FLEHIDQSLDKEKPKYSPD-------NPFKFQEADFIDAVVTPSYRNADQPQRFY-VAEI 912
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED--- 953
+ N S + +D ++ ++ + YG + + QPLL NLL R L
Sbjct: 913 CYTLNPRSEFPSADYATFDEYYLKRYGEAITNLDQPLLDVDHTSSRLNLLTPRHLNQKGK 972
Query: 954 ---SESHELEEYFDD-------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
+ S E + + L PELC++ + S + LPS+++R+ LL+A
Sbjct: 973 ALPTSSAETRKAKRENLQSKQILVPELCEIHPVPAS--LWRKAVCLPSVLYRVTTLLIAE 1030
Query: 1004 ELKHLLS-------ASFPEG 1016
EL+ ++ A PEG
Sbjct: 1031 ELRVQIAQEAGIGQAVLPEG 1050
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 220/479 (45%), Gaps = 113/479 (23%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + F+LERLE +GD+FLK+A+ L+ + V EG+L+ RS V+
Sbjct: 1229 SPSLILQALTLSNAGDFFNLERLETIGDSFLKHAITTFLYCTYSRVHEGKLSYMRSRQVS 1288
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC--------------SKE----- 1120
N NL +L R L + FDP A+ P C SK+
Sbjct: 1289 NLNLYRLGKRKGLASRMVASIFDP----AVNWLPPGFCIQNNREDKEDAGSSSKDSSLDV 1344
Query: 1121 --------TERTIHSQYDGRAPDDLNAEVRCSKG------------HHWLHKKTIADVVE 1160
T + +Q G L A V + H + K+IAD VE
Sbjct: 1345 EPGGNGMTTSKNPIAQVTGYDVTPLKASVLVNGDAIKRLLSYDLHMEHCIADKSIADCVE 1404
Query: 1161 ALVGAFIDDSGFKAATAFLKWIGIQVEF-------------------------EASQVTN 1195
AL+G ++ G +AA FL W+G++V + + Q +
Sbjct: 1405 ALLGCYLTTCGPRAAQLFLCWLGVKVSYLDQFDFAEPDTDPFDDLSGLDSSYEDWDQNPS 1464
Query: 1196 ICISSKSFLPLSASLDMATL-------------------EILLGHQ---------FLHRG 1227
++F+ +S + + + +L G+Q F +
Sbjct: 1465 TVCDLETFMKVSCAEEYGYIAPPKPPLFHHVGHAQDKLSHMLSGYQQFEETVQYSFNDKA 1524
Query: 1228 LLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
+LQAF HPS+ N + CYQRLEFLGDAVLDYLIT++L+ + PG LTDLRS LVN
Sbjct: 1525 YMLQAFTHPSYHYNTITDCYQRLEFLGDAVLDYLITNHLFKDPQQHSPGALTDLRSALVN 1584
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP------------ 1333
N FA++AV ++K+L F S L I+N+V + + +
Sbjct: 1585 NTIFASLAVKYDYHKYLKFVSPELFNIISNFVQFQQEQGEEQGMDSQTYINDEGEEESED 1644
Query: 1334 -RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
PK LGD+ ES GAI LDSG +L TVW++ + P++ KFS + +P+RELLE+
Sbjct: 1645 IEVPKALGDVFESVAGAIYLDSGMSLETVWRVYYRMMKPLIDKFSAKVPRSPVRELLEM 1703
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 13/148 (8%)
Query: 961 EYFDDLPPELCQLKI---IGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA--SFPE 1015
E +D P +C L+ + +++ G P + H + + +L H+LS F E
Sbjct: 1457 EDWDQNPSTVCDLETFMKVSCAEEYGYIAPPKPPLFHHVGH--AQDKLSHMLSGYQQFEE 1514
Query: 1016 GAEVS---AEMLLKALTTEKCQERF---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
+ S +L+A T +RLE LGDA L Y + HLF G
Sbjct: 1515 TVQYSFNDKAYMLQAFTHPSYHYNTITDCYQRLEFLGDAVLDYLITNHLFKDPQQHSPGA 1574
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LT RS VNN+ LA + + Y++
Sbjct: 1575 LTDLRSALVNNTIFASLAVKYDYHKYLK 1602
>gi|57236096|gb|AAW48725.1| dicer-2 [Aedes aegypti]
Length = 1658
Score = 239 bits (611), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 271/1028 (26%), Positives = 464/1028 (45%), Gaps = 124/1028 (12%)
Query: 55 PKQ---IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SIC 108
P+Q I R YQ + M++N I+YL TG GKTHIA+++I E+ + KP
Sbjct: 6 PQQDDFIPRDYQRTMKTICMQKNTIIYLPTGAGKTHIALMVIKEMGKDLDKPLTEGGKRT 65
Query: 109 IFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILL 167
F+ TVAL +QQA+ + ++ + + D W +E +Y+V+V QILL
Sbjct: 66 FFVVNTVALAKQQAEFLSHNLTYDTSIYTSDRNVDAWKQDKWLEEFAKYQVIVCTCQILL 125
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
L H ++ ++ I LLIFDECHH HP IM+ F + PR+ G++ ++
Sbjct: 126 DVLKHGYLSVKHINLLIFDECHHGV--GEHPMHGIMEQFLRVPKSDHPRVIGLSGM-LLY 182
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAE---DLESFVSSPVVRVYQYG-----PVIN 279
K + A + + LEN +A + +V + ++ F + P + Y PV+
Sbjct: 183 KQIKSVALVSPELERLENTFNATIATVGSYDAFTEVCKFSTDPNELLVSYSTLRLSPVMA 242
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
D ++ S+ + E +Y++ L D K++ +L + + L + G+ G
Sbjct: 243 DIVNNINAFSQTIEEFHLPKYLNQNKALLKDRPK---PLKEIRKLFTELIYQLGDTGLFG 299
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DGIASDLSCI 397
A L+ E + D S+ R A ++ F R + + S L
Sbjct: 300 GSIALLGLIVQ--------FELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDMK 351
Query: 398 EVLKEPFFSKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR 454
L + F S K+ +LI L + K ++FV R +A+ L ++L+ + F +
Sbjct: 352 TKLTK-FSSLKVRQLIDQLEKLYEENRDKKAKTLIFVQRRFSAKVLYHLLK-IYFAETED 409
Query: 455 CH-----FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ F+VG N + + +S + +LE+F+ E N++V T V EEG+D+Q C
Sbjct: 410 ANLIVPDFMVGNNGSMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQMCN 469
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE-LDLIKNFSKEEDRMNREIMD 563
V+++D P+T AS+ QS+GRARM S+Y ++D+ N+ L+ + + E+ + R ++
Sbjct: 470 TVVKYDHPQTFASYQQSKGRARMKNSQYMVMLDNENRHIFLEKYRLYKSIEEELRRCLIG 529
Query: 564 RTSS-----DAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
+T + DA E +Y + GA + A + LL+RYC +P D F N
Sbjct: 530 KTINRPDPLDADVHKE--LYNEIIPPFFTAKGAKLDALSAIQLLNRYCMGMPRDAFTNTN 587
Query: 613 PKFYYFD-DLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
+ D G I ++LP + + + I G P +++ AK+ A A L++ LN+
Sbjct: 588 VTWERIDLKDGRIIVEVLLPLQSTVREKISGNPMRNIKLAKRSAAFNACRKLYENKELNE 647
Query: 671 YLLP----QEDNATEDEPMLFSSDSDSYEGE--GSRG--ELHEMLVPAVLRQSWTKSQYP 722
+L+P + N +D D D+ G+ G++ H + P + + + P
Sbjct: 648 HLIPIDCKYQLNNLKDVYFRHWKDFDADLGKLAGTQKCIRTHAIQYPKQTTECFPQPGKP 707
Query: 723 VRLNFYFMQ----FIPDPAD-------RIY---REFGLFVKSLLPGEAE-HLKVDLHLAR 767
+ Y ++ F DP + +Y FGL LP A+ V L L
Sbjct: 708 CYI--YVLRIAAGFAQDPTNDNVNIFHSLYSSENNFGLMTTKPLPALAKMKFFVTLGLIN 765
Query: 768 GRSVMTKLV-PSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLL 824
T +V P+G ++ ++ + V D + EF+ D+ E +S +L++
Sbjct: 766 VHIEETPIVLPNGGSEIELALLRQFHVTVFRDVLKLWKEFLCCDYDN--EENS---FLVV 820
Query: 825 PVIFHKNS--VDWKIIR--RCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
P+ KNS +DWK+IR + LS P PS N E+D
Sbjct: 821 PL---KNSTHLDWKLIREFQNLSEP--------------PSEISTIARNKMEFEADKYRH 863
Query: 881 LV----YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRA 936
V Y +K+ Y+VT + SP+ + + S+ ++ +Y + + P Q L+
Sbjct: 864 KVILPWYKNNKEQPYVVTMVHEHLTPESPFPNPEYGSYANYFSQAYHLAVVKPDQFLIEV 923
Query: 937 KPLFRLRNLLHNRKLEDSESHELEEY-FDD-LPPELCQLKIIGFSKDIGSSLSLLPSIMH 994
K + N L+ +D +S + + F++ L PELC F D +LLPS +H
Sbjct: 924 KGITSYLNRLNPGVEDDGKSTRSKHWRFNEILIPELCH--NYQFPADYWLKATLLPSALH 981
Query: 995 RLENLLVA 1002
RL LL+A
Sbjct: 982 RLHYLLLA 989
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 215/443 (48%), Gaps = 56/443 (12%)
Query: 1002 AIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLL 1061
AI+L L A+ + + ++KALTT+ + F LER E+LGDAFLK+++ +L
Sbjct: 1154 AIKLLQLTPAN-TVNVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKY 1212
Query: 1062 HDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG-RRCPRICSKE 1120
H EG LT + V+N NL+ A + L ++ FDP + P+ +
Sbjct: 1213 HKEWHEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPPLATVPKNIKRT 1272
Query: 1121 TERTIHSQ-----------------YDGRAPDDLNAEVRC-------SKGHHWLHKKTI- 1155
+ HS + DD A++ S ++L ++T+
Sbjct: 1273 MQSVNHSARVLYRLTLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMG 1332
Query: 1156 ----ADVVEALVGAFIDDSGFKAATAFLKWIGI------QVEFEASQVTNICISSK-SFL 1204
AD +EAL+G + G + + L GI + A ++ N + +
Sbjct: 1333 DKTPADAMEALLGVCVQSVGIERSFKLLPHFGILPKTHNVLRLLADKIENQRLKTHIDIR 1392
Query: 1205 PLSASL-DMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLIT 1261
+ A L + +E +LG++F R LLQA H S+ NR+ G YQ+LEFLGDAVLD+LI+
Sbjct: 1393 EVDAFLKNYRRIEGILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLIS 1452
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-- 1319
Y++ P + PGQLTDLRS LVNN A + V + +++ +S ++T++ +V +
Sbjct: 1453 MYIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVLFQE 1512
Query: 1320 -----------MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSF 1368
++ S R++ E PK LGD+ ES + A+ LDSG + W+++
Sbjct: 1513 QHKHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVIYGM 1572
Query: 1369 L-DPILKFS-NLQLNPIRELLEL 1389
+ + IL F+ N + +R+L E
Sbjct: 1573 MGNEILTFTENTPIQIVRQLYEF 1595
>gi|429137921|gb|AFZ74931.1| dicer 2 [Aphis glycines]
Length = 1628
Score = 238 bits (607), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 255/1023 (24%), Positives = 471/1023 (46%), Gaps = 131/1023 (12%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAPT 114
+ RKYQLEL + + N I+YL TG GKT+IA +L+ L + KP + F+ +
Sbjct: 12 VPRKYQLELLEDVKKSNTILYLPTGSGKTYIATMLVKNLGDCLTKPIGHGRKWTFFIVQS 71
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA + + + + TF G + S W++ +++ +LVM QI L L+H
Sbjct: 72 VPLVAQQANNLRRHLPWSIGTFSGDMNVDFWSQKHWDEILEKCHILVMTAQIYLNNLHHG 131
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD--IMKVPRIFGMTASPVVGKGAS 231
++ ++ LLIFDECHHA HP+ +IM+ + + I + P I G+TA+ + S
Sbjct: 132 YMHIKDANLLIFDECHHAVAL--HPFKQIMQVLHDSNLNIDERPHILGLTATLI----NS 185
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT--CS 289
N+ + L+N +A + + D E+++ F + P + Y I D +T S
Sbjct: 186 NTKNVKDELTKLQNTFNATIKTKYD-ENIQIFSARPEEFISLYDEYILDDEMVAITQRIS 244
Query: 290 EQLAEIKREQYISAL-----SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS 344
+ + +K+ Q + + + +++ ++ + ++K ++ L + G A A+
Sbjct: 245 KIVDHLKKFQAPAKIEPIKENNEVYYLENQKQSSKNFANYFLDIEVNLSDGGPYIAFLAT 304
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFASQASE-VFAAICRRDGIASDLSCIEVLKEP 403
+ + E R +++ +TI + + + VF + + I + S L
Sbjct: 305 WHFIVEIEKKRKICTDSKNHTIMSMVLSEVTIIRKLVFDYMNKHSSINNGHST--TLNN- 361
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR-----CHFL 458
S KL +L+ ILS+ + C+VFV+R TA+ L + +++ F+ + C F+
Sbjct: 362 -VSPKLKKLMEILSSIKATD--TCLVFVDRRTTAKILYHYIKD--FIQEYNQENIVCEFI 416
Query: 459 VGVNAGLKSMSRNAM------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
VG + S+ + I++KF +N+L+ ++V EEG+DIQTC VIR+D P
Sbjct: 417 VGARGIISPDSKEMVYKKQQNNDIIKKFNDNIINVLITSEVLEEGVDIQTCNYVIRYDSP 476
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK-NFSKEEDRMNREIMDRTSSDAFT 571
+ S++QS+GRAR S++ +V NQ + + + +++K E+ + + ++D D
Sbjct: 477 KNFPSYVQSKGRARSADSKFIIMV--PNQLKFEKTQSDYNKMEEEIVKILVDNDIDDENN 534
Query: 572 CSE-ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIIL 630
++K + A ++ +S+++RYC LP D F + P++Y + + +
Sbjct: 535 DENMTEVFK--TKHAILTHDVAISIINRYCFSLPQDRFTDLSPEWYIAQNNNKFKKYKL- 591
Query: 631 PANAPIHQIVGTPQ-----SSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDE 683
PI+ ++ TP +S + AKK A A +L+K+GAL++YLLP ++NA ++
Sbjct: 592 --KLPINSVIKTPIDGIFCASKKNAKKSAAFNACIELYKVGALDEYLLPISIKNNAVFND 649
Query: 684 PMLFSS------DSDSYEGEGSRGELHEML---VPAVLRQSWTKSQYPVRLNFYFMQFIP 734
F ++ +Y+ + ++ M+ P L S+ + P L + ++ +P
Sbjct: 650 LKWFPHWDEKDIEASNYKLKPGTNKMRRMVHIESPTHLHGSYPQVTKPSYL--HILRCVP 707
Query: 735 D----------PADRIYR---EFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIM 781
D D++ R EFG+ + LP + + L G ++ +V IM
Sbjct: 708 DYIQLKEDKYKTFDKLLRSNEEFGILTSNKLPKVS---NFPIFLPFGNVNVSIIVNVEIM 764
Query: 782 QA-----QQFQEMFLKVILDRSEFNSEFVPLGKDDYCESS---SSTFYLLLPVIFHKN-- 831
++ ++ K+ LD LG D+ S YL++P+ N
Sbjct: 765 HLDHTSHKKLEDFHNKLFLDV---------LGVKDFIVRSYDNGDNSYLVVPISSTDNKC 815
Query: 832 SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWF- 890
+VDW +I ++ V RK+ L++ N S W+
Sbjct: 816 NVDWNVIN--INKFVETEEPTMEQRKTKFYEEYLKIPNVISP---------------WYR 858
Query: 891 -------YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
Y+VT++ + S + S+ ++ + Y I++ H QP+++ K L +
Sbjct: 859 NIVPIQRYIVTDVYLDMTPESSFPTSEYDTYETYFSDKYSINVTHKDQPMIKVKSLGVTK 918
Query: 944 -NLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
N L R + EY + L PE C F +LP+I++RL+ LL+A
Sbjct: 919 LNYLIPRFIIGKPDRR-NEYIEILIPEFCTWH--KFPSVYWLKALMLPTILYRLDKLLLA 975
Query: 1003 IEL 1005
+L
Sbjct: 976 EDL 978
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 219/476 (46%), Gaps = 91/476 (19%)
Query: 996 LENLLVAIELKHLLSASFPEGAEVSAEM-----------LLKALTTEKCQERFSLERLEI 1044
L+N+L + +L + + P +S E+ +LKA+T + F+ ER+E
Sbjct: 1096 LKNVLTEMNTLNLTNNTSPTLGPLSKEVSTKNIGPRQSDILKAITPPFANDMFNYERMET 1155
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
GD+FLK+AV LF + +EG LT + V N NL + NL Y+ FDP
Sbjct: 1156 YGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKIVGNRNLFYVGRNLNLGSYLTVNVFDPN 1215
Query: 1105 Q-----FFALGRRCPRICSK-----------------------------ETERTIH---- 1126
F + + I K E E+ I
Sbjct: 1216 MDWIPPCFGVPQTLKEIIEKGDLQSDVLHQINIPKDNQIIGILSDNTWKEIEKEIIKFKE 1275
Query: 1127 ----SQYDGRAPDDLNAEVRCSKGHHWLHK-----KTIADVVEALVGAFIDDSGFKAATA 1177
+ D +D+ V S+ +++K K +AD VE+L+G ++ G +
Sbjct: 1276 LSDITMSDSDGEEDI-PRVGHSQSDLFIYKQSVSDKMVADCVESLIGTYVYKRGVEVGFK 1334
Query: 1178 FLKWIGIQVE-----FEASQVTNIC--ISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
L+ +GI + F+ + NI +S LP LE +G+ F H+ LL
Sbjct: 1335 VLQGLGIIPKQFIDAFKPKPIENIYNDLSFSKVLP-----GYELLERRIGYSFKHKHLLA 1389
Query: 1231 QAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
QA HP++ + G CYQRLEFLGDA+LD+LIT+Y+ + PG++TD+RS LVNN
Sbjct: 1390 QALTHPTY-QFGYTECYQRLEFLGDAILDFLITTYIIQHCYQKTPGEITDIRSSLVNNIT 1448
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYVD--------------YMITPSSTREVKEGPR 1334
FA+++ ++F++ S ++E I+ + + Y+I S E
Sbjct: 1449 FASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQEILYLIEESDCY-AAESVD 1507
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKF-SNLQLNPIRELLE 1388
PKVLGDL ES + AI LD G +LN VW FL + I +F +N+ NPIR L E
Sbjct: 1508 VPKVLGDLFESLIAAIYLDCGRDLNFVWTFCYRFLENEINEFCTNVPKNPIRILHE 1563
>gi|393220706|gb|EJD06192.1| hypothetical protein FOMMEDRAFT_145449 [Fomitiporia mediterranea
MF3/22]
Length = 1473
Score = 237 bits (605), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 298/668 (44%), Gaps = 79/668 (11%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS--ICIFLAPTV 115
+ R YQ E+ ++A N+I L TG GKT IA LLI ++ +P ++ +FL P V
Sbjct: 11 VPRAYQEEIFEQAQNGNVIAALDTGSGKTFIAALLI---KWVMSQPSQAGKKTVFLVPKV 67
Query: 116 ALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQ V+ + VR + G WE E Q + LVM QI L H +
Sbjct: 68 PLVDQQRDVLSKQTPLIVRGYVGAMGVDAWDKGRWELEFLQSDCLVMTAQIFKNILVHGY 127
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
++ +ALLIFDECHHA + HPY IM D Y+ K P+IFGMTASP+ + +
Sbjct: 128 WSLDQVALLIFDECHHA--RKYHPYNAIMVDHYRSSEWK-PKIFGMTASPIWNREKPLE- 183
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDL-ESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
SI +L+N L +KV +V DL + V+ P+ + +Y N + Y T
Sbjct: 184 ----SIETLQNNLCSKVIAVRQHMDLLDQHVNRPIELIVRYQ---NPSDEHYDT------ 230
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
Y +L LH + + + + K L +G GA + ++L
Sbjct: 231 -----YYKPSLWDYLHSDEQVISPILAIRDAEVRYKVTLNAVGPAGADY--FLLKHAIHA 283
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD------GIASDLSCI---------- 397
+ + A I + AS S+ + R D G+ S +
Sbjct: 284 VEEYELRAMMPEISSRSRKKASFTSDTISDSGRNDDNELAIGLEKLRSAVLSFRRRLLSD 343
Query: 398 -EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-RC 455
L + S KL + IL R + + I+FVN+ A+ALS+IL + +W RC
Sbjct: 344 GRTLPPEWLSPKLRAAVDILVKHR-SESFQGIIFVNQRQVAKALSWILGRVLETKTWLRC 402
Query: 456 HFLVG------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
L+G ++ K M + I++ FRSG LNLL+AT VGEEGLD C LVIR+
Sbjct: 403 GELIGHGESSKSSSSGKGMDIKRQRDIVQSFRSGNLNLLIATDVGEEGLDFPACALVIRY 462
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM------------ 557
D + + ++QSRGRAR S Y + + +E+ K E +
Sbjct: 463 DSVKHMVGYVQSRGRARQQNSTYVVMAAENDAQEIARYKGLRNAEPELRIVYQTMNAGGS 522
Query: 558 -----NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
N + +D D + Y + S+GA ++ +SLL +CS +P D +
Sbjct: 523 SGELDNGDELDNDYVDPLDLASRETYTIPSTGATLTYSSAISLLSHFCSLIPGDSYTRSL 582
Query: 613 PKFYYFDDLGGT--ICHIILPANAPI--HQIV--GTPQSSMEAAKKDACLKAIEDLHKLG 666
Y + T + LP P+ Q++ G P+ S + AK+ A+ LH LG
Sbjct: 583 QPKYIIESADKTEFTATLHLPRALPLTSDQLLYNGPPKRSKKEAKRAVAFIAMRMLHTLG 642
Query: 667 ALNDYLLP 674
+DYL P
Sbjct: 643 IFDDYLSP 650
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 209/449 (46%), Gaps = 73/449 (16%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
LP C+ + F DI + + S R+ ++ A ++ L +P + +++
Sbjct: 912 LPESYCRRAL--FHMDIVEAFQVFASACQRVCDVFRARVARNFLK--YPP---IPDNLIV 964
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+ALT F+ +RLE +GD+ LK +V ++F EG+LT + N+V+N LL
Sbjct: 965 EALTLPSAMAGFNNQRLETMGDSVLKLSVVVYIFNAFPNRHEGQLTALKENSVSNRLLLA 1024
Query: 1086 LAARNNLQVYI-------RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLN 1138
A +L+ ++ R F+ +LG C +I S+E
Sbjct: 1025 RAKEVHLERFLTSENRSMRTWRFERSSVTSLGT-C-KIGSEE------------------ 1064
Query: 1139 AEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI 1198
+ H ++++ D +EA +GA + A G+ + +C
Sbjct: 1065 ----IALAHRTFPRRSLQDCMEASLGA-----AYVAG-------GLNFALQTGTALGLCF 1108
Query: 1199 SSKS----------FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQ 1246
+ F+P +A L+ L + F + LL++A HPSF+ L CYQ
Sbjct: 1109 GGPTPWPERYPLTEFVPPAALF--GKLQEDLQYTFRNGKLLVEAVKHPSFDFLENYPCYQ 1166
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFD 1305
RLEFLGDAV++ ++T+YLY+ +P GQ++ R+ + N A +AV++ S +K+L+ +
Sbjct: 1167 RLEFLGDAVIELVVTTYLYNKFPGANSGQMSWARARAICNTTLAALAVNRLSLHKYLLAN 1226
Query: 1306 SNVLSETINNYVDYMITPS----STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
LSE + V+ + S S + + P PKVLGD+ ES +GA+ +DSGF+
Sbjct: 1227 CVELSEDVAKEVEILSAASYEDVSLNDWRYDP--PKVLGDIFESVIGAVFVDSGFDYTIT 1284
Query: 1362 WKIMLSFLDPILKF--SNLQLNPIRELLE 1388
I+ + +L ++ +P+ LL+
Sbjct: 1285 APIIEELMKDVLVLLHPDIPYDPVSRLLQ 1313
>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
Length = 1538
Score = 236 bits (602), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 305/647 (47%), Gaps = 76/647 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ EL + + FL +
Sbjct: 128 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDNRANGKPHRVSFFLVDS 187
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ +I V F G L W++ + + V+V +IL CL +
Sbjct: 188 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDEHLQRNMVIVCTAEILNQCLLNS 247
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGKGASA 232
++KM+ I LLIFDE HHA K +HPYA+I++D ++K + PR+FGMTASP+ KG
Sbjct: 248 YVKMDQINLLIFDEAHHA--KKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG--- 302
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
++ ++ LE LLD+++ + L VS P+ +V+ Y N S + T +L
Sbjct: 303 --DITEAATRLETLLDSRIATTSKITLLREVVSRPIEKVWAY----NRLESPFAT---EL 353
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD- 351
++ +Y K L ++ LG + A + L+ D
Sbjct: 354 YKLMDTRY---------------GNIKVLEGVYRFAWHASSELGKWCSDRAWWHALADDV 398
Query: 352 ----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR-RDGIASDLSCIEVLKEPFFS 406
E ++L+E+ NT++ ++ VF I R R+ AS+ +P
Sbjct: 399 LPKLEGNISKLVES--NTLN-------AEHGAVFKDIIRIRE--ASETVKNYSFADPELP 447
Query: 407 KKLLRLIGILSTFRLQQHM------KCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
+L + +L L +H KCIVF + TA+ L+ + L + R L+G
Sbjct: 448 GELSPKVQLLR-MELSKHFSDTTGTKCIVFTQKRYTAKILNELFTVLN-IPHLRPGVLIG 505
Query: 461 VNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
V G + M+ + L KFR+GE+N L AT V EEGLDI C LV+RFDL T+
Sbjct: 506 VRPGDIGGMNVTFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQ 565
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--------EIMDRTSSDA 569
++QSRGRAR S YA +V+ N +K + E M R I+ D
Sbjct: 566 YVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAEKIMQRFCETLPEDRILHGNDHDL 625
Query: 570 FTCSEE----RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI 625
+ +E R + V S+GA ++ +++L RY S L +++ P+ + +
Sbjct: 626 DSLLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVGHVSNAYV 685
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
C +ILP +PI + G+P AK+ A L K L+DY
Sbjct: 686 CEVILPEKSPIRGLTGSPAIRKAVAKQSAAFDTCLLLRKHRLLDDYF 732
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 209/461 (45%), Gaps = 58/461 (12%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L+A+ + RNLL K+ E E F P L+I I S+ P
Sbjct: 980 QPVLQAELVRLRRNLLD--KMTTQEKEMQTECFICAEP----LRISAIPTSIVSTCLAFP 1033
Query: 991 SIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+I+ RL++ L+A+E L +F + ++ + E + + ++ + + ER
Sbjct: 1034 AIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGK-NYER 1092
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE LGD FLK A L+ + DE + R + N NL A + + YIR + F
Sbjct: 1093 LEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGF 1152
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G + K+ + + S+G H L +KTIADV EA
Sbjct: 1153 SRHIWYPDG--LTLLHGKDHSKKL-----------------LSEGKHALGEKTIADVCEA 1193
Query: 1162 LVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSASLDM 1212
L+GA + G KA TA + +V +T + ++ P + D+
Sbjct: 1194 LIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYITLYTMPKYQTEKPRGSEDDL 1253
Query: 1213 AT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG----CYQRLEFLGDAVLDYLITSYLYSV 1267
A +E LG+ F + LL A HPS G CYQRLEFLGD++LD + L+
Sbjct: 1254 ARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRR 1313
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
+P P LT+ + +V+N+ ++V F++ ++ SN L I +YV+ + + +
Sbjct: 1314 FPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIESAQAES 1373
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
V + P PK L D+VE+ LGAI +DS F+ +
Sbjct: 1374 RGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSKFDFQVI 1412
>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
Length = 1463
Score = 236 bits (601), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 217/760 (28%), Positives = 345/760 (45%), Gaps = 128/760 (16%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA--HL-IRKPQKSICIFLAPT 114
+ R+YQ E+ +A N+I L TG GKT+I+ LLI ++ H+ +RK I +FL P
Sbjct: 13 LPRRYQEEIFARAQRGNVIAALDTGSGKTYISTLLIKWISARHIGLRK----IIVFLVPK 68
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
VALV QQ I + +V CG + L W+KE+D+ +VLVM QI L L H
Sbjct: 69 VALVDQQGDFIAKQTPLRVIKCCGATAVDLSDRQGWKKELDRADVLVMTAQIFLNLLTHS 128
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++ ++L++FDECHH + NH Y IM+++++ P+IFGMTASP+ + +
Sbjct: 129 HWSLDKVSLMVFDECHH--TRKNHAYNGIMREYFQCPTQDRPKIFGMTASPIWNPKDAVE 186
Query: 234 ANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
S+ +LE LDAKV +V + +L P +++Y P + + Y T
Sbjct: 187 -----SLATLERNLDAKVIAVRQHVGELMDHSPKPQELLHEYPPPLQ-SYPVYPT----- 235
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGA------------ 340
L +++ Q N ++++ + +LG GA
Sbjct: 236 ---------PTLWERMNLQQLPPNIGIPIDKIRTRYEVTYASLGPFGAELYLYNDIKQRI 286
Query: 341 --------------LHASYILLSGDETMRNEL----IEAEGNTIDDSLCRFASQASEVFA 382
L Y +G +++ L + AE + D+L + S
Sbjct: 287 TQIFQQISGVDIDYLSVGYADTAGGDSVVPNLPDVELPAELEDLQDALVEYRS------- 339
Query: 383 AICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-----STFRLQQHMKCIVFVNRIVTA 437
D ++ + LK + S K+ LI IL STF + IVFV + A
Sbjct: 340 -FFEDDSNSNSVPLTVHLK--WCSPKVRELIDILFGHYTSTF------QGIVFVEQRHVA 390
Query: 438 RALSYILQNLKFLASW-RCHFLVGVNAG------LKSMSRNAMKSILEKFRSGELNLLVA 490
L+ +L + L+ + L+G A +K M+ + I++ FR ++NLL+A
Sbjct: 391 ACLATMLSRVPQLSHLIKSEQLIGHGASTLAKSQMKGMALKTQQDIVKMFRERKINLLIA 450
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNF 550
T V EEGLD C LVIRFD + + ++QSRGRAR S++ +V G+ K+F
Sbjct: 451 TSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRGRARHRSSKFIIMVQQGHTVHTARYKSF 510
Query: 551 SKEEDRMNREIMDRTSSDAFTCSEE-------------RIYKVDSSGACISAGYGVSLLH 597
S+ E ++ R + R +A EE Y V S+GA ++ ++LL+
Sbjct: 511 SESEPQL-RVVYQRRDIEAHFPDEEEEEQAHPADLAERERYVVPSTGAILTYNSAIALLN 569
Query: 598 RYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQ----IVGTPQSSMEAAKKD 653
CS +PHD+ F P Y D T+ LP + P+ Q VG + S + AK+
Sbjct: 570 HLCSLIPHDK-FTPTHLPRYTGDFSSTLQ---LPMSLPLPQEDLTYVGPNRRSKKEAKRA 625
Query: 654 ACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR 713
A++ LH LG +DYLLP + N +D+D + ++ +M+ V R
Sbjct: 626 VAFVAVQRLHLLGVFDDYLLPAQSNGAS------GADADGRAIQDV-SKIPDMMKVDV-R 677
Query: 714 QSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLP 753
WT Q + L+ ++ +P GL +LLP
Sbjct: 678 DPWTTGQT-LWLDIVYLDGLPCA--------GLITGTLLP 708
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 195/432 (45%), Gaps = 47/432 (10%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
P LC+ I S+D+ + +LP + HR+ ++ A + + P + ++L+
Sbjct: 901 FPLSLCRRAEI--SEDVFRAFHVLPELCHRITDVYRAHTAR--IELGLPP---IVDDLLV 953
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+ALT F+ +RLE LGD+ LK A +LF + EG+L R N+V+N LL
Sbjct: 954 QALTLPSANAGFNNQRLETLGDSVLKLATVVYLFNKYPHRHEGQLDVLRRNSVSNRTLLA 1013
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A L+ Y+ +P Q L R Y DL R
Sbjct: 1014 RAKEVGLEQYLSSEP----QSVRLWR-----------------YTALPDRDLFEPYRYVP 1052
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSG----FKAATAFLKWIGIQVEFEASQVTNICISSK 1201
++++ D +EAL+GA G +A TA G + + A I S
Sbjct: 1053 --RVFPRRSLQDCMEALLGAAFVAGGIPMALRAGTALGLSFGGPLPWNARYGGQIAESPV 1110
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAVLDYLI 1260
+ L L+ LG++F LLL+A HPSF YQRLEFLGDA++D +
Sbjct: 1111 TVL-------FTDLQDTLGYRFRCGKLLLEAVTHPSFGAAETSSYQRLEFLGDALIDLTV 1163
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDY 1319
YLY+ +P+ GQL+ RS V A A+VAV + K L+ ++ LS + +
Sbjct: 1164 MRYLYNKFPEATSGQLSWARSRAVCAPALASVAVKRLGLQKLLLVNNVELSIAMGKCIPI 1223
Query: 1320 MITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN 1377
+ + S + G + PK + D++ES LGA+ +D FN I L+ +L+
Sbjct: 1224 LESLSEEEIILSGWKQDPPKAMSDVLESVLGAVFVDLDFNFEKASSIAEQVLNDLLEVLT 1283
Query: 1378 LQL--NPIRELL 1387
+L +P+ L+
Sbjct: 1284 PELPRDPVSNLM 1295
>gi|261198280|ref|XP_002625542.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
gi|239595505|gb|EEQ78086.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
Length = 1522
Score = 236 bits (601), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 218/749 (29%), Positives = 333/749 (44%), Gaps = 106/749 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL +KA N I L TG GKT IAVLL+ ELA I FL T
Sbjct: 91 REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 150
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V++ +I + FCG + L S W+K + ++V ++L CL
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 210
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI+ME I LLIFDE HHA K +HPYA+I+KDFY K + P+IFGMTASPV
Sbjct: 211 FIQMERINLLIFDEAHHA--KKDHPYARIIKDFYLQKIVVQNRPKIFGMTASPV-----D 263
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ ++ K+ +LE LLD+++ + + L + P +++ Y ++D S + +
Sbjct: 264 AKVDVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDR-LDDPSETEL----- 317
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL-LSG 350
++S+++ ++ L F LE G + ++ +
Sbjct: 318 -------------------YKSMQSRFGRIRELEKIFSFALEASSTLGRWCSDWLWTFAL 358
Query: 351 DETMRNELIEAEGNTIDDSL-------CRFASQASEVF---AAICRRDGIASDLSCIEVL 400
DE EL + EG + + A +A ++ A + + + + C E L
Sbjct: 359 DEA---ELPKLEGKISKSYMQSRSGNQLKGADEAIDLLREAAQLIKSHAFYTPVDCTEHL 415
Query: 401 KEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
S K+ L LS F KCIVF+ + TAR L+ + + R L+
Sbjct: 416 -----SSKVRLLSHELSMYFERHTDTKCIVFIQQRYTARLLAELFSRIG-TQHMRTGVLI 469
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV G R ++L KFR GELN L AT V EEGLDI C LVIRFDL T+
Sbjct: 470 GVRHDGIGGANFSFRQQFLTLL-KFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTM 528
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR-------EIMDRTSSD 568
++QSRGRAR S YA +V+ N ++ + E+ M R + + R SSD
Sbjct: 529 IQYVQSRGRARHSHSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSSD 588
Query: 569 --AFTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKL----PHDEFFNPKPKFYYFD 619
ER + + S+GA ++ +++L Y S L + Y +
Sbjct: 589 DLGMILDNERYRNSFTIHSTGAKLTYESSLAVLAHYASSLVRVSARGRYMEANISKQYEN 648
Query: 620 DL------------GGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
D+ G +C LP +P + G P + AK+ A + L K G
Sbjct: 649 DMSAQVNYFIERIDGAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGL 708
Query: 668 LNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
L+D+ + ++ L + + + + ++M+V L W ++ +
Sbjct: 709 LDDHFV------SKYHKRLPAMRNAKLAIKSKKANQYDMIVKPKL---WENARGTIPKEI 759
Query: 728 YFMQFIPDPADRIYREFG---LFVKSLLP 753
Y P ++ RE+ LF + LP
Sbjct: 760 YATFLTLRPTGKLRREYHPLLLFTRDALP 788
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 213/473 (45%), Gaps = 84/473 (17%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
KQP+ RA+ L RLR L +R+ E E E Y+ + PE L+I + +
Sbjct: 963 KQPVFRAE-LVRLRRNLLDRETE-QEKGEGTTYY--ICPE--PLRISALPAPVAAFAFAF 1016
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERF---------- 1037
P+I+ RLE+ L+++E +L + + + L+ALT ++ +E
Sbjct: 1017 PAIISRLESYLISLEACDMLHIN------IKTHLALEALTKDSDNTEEHRGEQIHFQRGM 1070
Query: 1038 --SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
+ ERLE LGD FLK A LF ++ DE + +R + N NL A R L +
Sbjct: 1071 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEF 1130
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
IR Q F ++ G + G+A + S+ H L KTI
Sbjct: 1131 IRTQGFSRRNWYPEGIKL---------------LQGKAKSE-------SQNKHSLGDKTI 1168
Query: 1156 ADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP-- 1205
AD+ EAL+GA + DS KA T F+ + AS+ C + LP
Sbjct: 1169 ADICEALIGASLLSGGKAHRFDSAVKAVTTFVN----SDDHRASEWN--CYVNLYSLPDY 1222
Query: 1206 LSASLDMATLEIL------LGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVL 1256
A D L++ LG+QF + LL AF H SF CYQRLEFLGD++L
Sbjct: 1223 QIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDSLL 1282
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D + YLY YP P LT+ + +V+N+ VAV ++ LI+ SN L I Y
Sbjct: 1283 DMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRY 1342
Query: 1317 V--------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
V D +P + + P+C L D++E+ +GAI +DS F V
Sbjct: 1343 VEEIELAEADSNNSPDAWTTTSDPPKC---LPDMLEAYIGAIFVDSNFKFEVV 1392
>gi|239607869|gb|EEQ84856.1| dicer-like protein [Ajellomyces dermatitidis ER-3]
Length = 1522
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 218/749 (29%), Positives = 333/749 (44%), Gaps = 106/749 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL +KA N I L TG GKT IAVLL+ ELA I FL T
Sbjct: 91 REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 150
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V++ +I + FCG + L S W+K + ++V ++L CL
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 210
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI+ME I LLIFDE HHA K +HPYA+I+KDFY K + P+IFGMTASPV
Sbjct: 211 FIQMERINLLIFDEAHHA--KKDHPYARIIKDFYLQKIVVQNRPKIFGMTASPV-----D 263
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A+ ++ K+ +LE LLD+++ + + L + P +++ Y ++D S + +
Sbjct: 264 AKVDVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDR-LDDPSETEL----- 317
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL-LSG 350
++S+++ ++ L F LE G + ++ +
Sbjct: 318 -------------------YKSMQSRFGRIRELEKIFSFALEASSTLGRWCSDWLWTFAL 358
Query: 351 DETMRNELIEAEGNTIDDSL-------CRFASQASEVF---AAICRRDGIASDLSCIEVL 400
DE EL + EG + + A +A ++ A + + + + C E L
Sbjct: 359 DEA---ELPKLEGKISKSYMQSRSGNQLKGADEAIDLLREAAQLIKSHAFYTPVDCTEHL 415
Query: 401 KEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
S K+ L LS F KCIVF+ + TAR L+ + + R L+
Sbjct: 416 -----SSKVRLLSHELSMYFERHTDTKCIVFIQQRYTARLLAELFSRIG-TQHMRTGVLI 469
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV G R ++L KFR GELN L AT V EEGLDI C LVIRFDL T+
Sbjct: 470 GVRHDGIGGANFSFRQQFLTLL-KFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTM 528
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR-------EIMDRTSSD 568
++QSRGRAR S YA +V+ N ++ + E+ M R + + R SSD
Sbjct: 529 IQYVQSRGRARHSHSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSSD 588
Query: 569 --AFTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKL----PHDEFFNPKPKFYYFD 619
ER + + S+GA ++ +++L Y S L + Y +
Sbjct: 589 DLGMILDNERYRNSFTIHSTGAKLTYESSLAVLAHYASSLVRVSARGRYIEANISKQYEN 648
Query: 620 DL------------GGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
D+ G +C LP +P + G P + AK+ A + L K G
Sbjct: 649 DMSAQVNYFIERIDGAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGL 708
Query: 668 LNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
L+D+ + ++ L + + + + ++M+V L W ++ +
Sbjct: 709 LDDHFV------SKYHKRLPAMRNAKLAIKSKKANQYDMIVKPKL---WENARGTIPKEI 759
Query: 728 YFMQFIPDPADRIYREFG---LFVKSLLP 753
Y P ++ RE+ LF + LP
Sbjct: 760 YATFLTLRPTGKLRREYHPLLLFTRDALP 788
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 213/473 (45%), Gaps = 84/473 (17%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
KQP+ RA+ L RLR L +R+ E E E Y+ + PE L+I + +
Sbjct: 963 KQPVFRAE-LVRLRRNLLDRETE-QEKGEGTTYY--ICPE--PLRISALPAPVAAFAFAF 1016
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERF---------- 1037
P+I+ RLE+ L+++E +L + + + L+ALT ++ +E
Sbjct: 1017 PAIISRLESYLISLEACDMLHIN------IKTHLALEALTKDSDNTEEHRGEQIHFQRGM 1070
Query: 1038 --SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
+ ERLE LGD FLK A LF ++ DE + +R + N NL A R L +
Sbjct: 1071 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEF 1130
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
IR Q F ++ G + G+A + S+ H L KTI
Sbjct: 1131 IRTQGFSRRNWYPEGIKL---------------LQGKAKSE-------SQNKHSLGDKTI 1168
Query: 1156 ADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP-- 1205
AD+ EAL+GA + DS KA T F+ + AS+ C + LP
Sbjct: 1169 ADICEALIGASLLSGGKAHRFDSAVKAVTTFVN----SDDHRASEWN--CYVNLYSLPDY 1222
Query: 1206 LSASLDMATLEIL------LGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVL 1256
A D L++ LG+QF + LL AF H SF CYQRLEFLGD++L
Sbjct: 1223 QIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDSLL 1282
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D + YLY YP P LT+ + +V+N+ VAV ++ LI+ SN L I Y
Sbjct: 1283 DMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQITRY 1342
Query: 1317 V--------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
V D +P + + P+C L D++E+ +GAI +DS F V
Sbjct: 1343 VEEIELAEADSNNSPDAWTTTSDPPKC---LPDMLEAYIGAIFVDSNFKFEVV 1392
>gi|154283385|ref|XP_001542488.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410668|gb|EDN06056.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1359
Score = 235 bits (599), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 330/1323 (24%), Positives = 517/1323 (39%), Gaps = 281/1323 (21%)
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY- 207
WEK + ++V ++L CL FI+ME I LLIFDE H A K HPYA+I+KDFY
Sbjct: 118 WEKHFSKNMIIVCTAEVLCQCLLRSFIRMEQINLLIFDEAHRA--KKEHPYARIVKDFYL 175
Query: 208 -KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSS 266
+P+ K P+IFGMTASPV DAKV + A++LE+ + S
Sbjct: 176 RRPEAQKRPKIFGMTASPV----------------------DAKVDVAKAAKNLETLLDS 213
Query: 267 PVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHD 326
+ T+S+ + +A + ++ + L
Sbjct: 214 QIA-----------TASNLDALRQAIARPTEQIWV-------------------IRELEK 243
Query: 327 SMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDD---SLCRFASQASEVFAA 383
+ LE + G + ++ E EL + EG + S R S+ +
Sbjct: 244 IFFYALEASSMLGKWCSDWLWTFALEA--TELPKLEGRVSKNYMQSSSRDHSKGLDEAIK 301
Query: 384 ICRRDG--IASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARAL 440
+ R G I + V S K+ L+ LS F KCIVFV + TAR L
Sbjct: 302 LLREAGQLIRNHTFDTPVDCPAHLSSKVRLLLHELSLYFERHTDTKCIVFVQQRHTARLL 361
Query: 441 SYILQNLKFLASWRCHFLVGVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEE 496
+ + + + L+GV G R ++L KFR GELN
Sbjct: 362 AELFSRIG-TRHMQTGILIGVQHDGIGGANFSFRQQFLTLL-KFRKGELN---------- 409
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDR 556
CLV R + YA +V+ N I+ + E
Sbjct: 410 -------CLV-----------------RPELDHDSYAHMVERDNLIHASCIQEAQRAEHI 445
Query: 557 MNR-------EIMDRTSSD--AFTCSEERIYK---VDSSGACISAGYGVSLLHRYCSKLP 604
M R + + R SSD +ER +K V S+GA ++ + +L Y S L
Sbjct: 446 MRRFCEALPEDRIIRGSSDDLGMNLDKERYHKSFTVHSTGATLTYPSSLVVLAHYASSLQ 505
Query: 605 HDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHK 664
+++ +P+ ++ G +C ILP +P + G P + A++ A + L K
Sbjct: 506 YEKETSPQVNYFIERIDGAFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRK 565
Query: 665 LGALNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT 717
G L+D+ LP NA + + S ++ Y+ M+V L W
Sbjct: 566 NGILDDHFVSKYYKRLPAMRNA---KLAIKSKKTNQYD----------MMVKPKL---WD 609
Query: 718 KSQYPVRLNFYFMQFIPDPADRIYREFG---LFVKSLLPG------------EAEHLKVD 762
+ + + PA ++ R++ LF + LP E+E + V
Sbjct: 610 SGRGTTPSVIWATLLMLSPAAKLRRDYQPLILFTRYQLPKFPIFPLYLEDDIESEVITVP 669
Query: 763 LHLA-RGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFY 821
LH+ R L+ + ++ FQ++F KV Y + Y
Sbjct: 670 LHMPLRASEDELDLLTTFTLRI--FQDLFHKV------------------YEHQPAMMTY 709
Query: 822 LLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQL--HNG---WSSE-- 874
L P + N D +VD + L +Q N WS +
Sbjct: 710 WLAPAKLNSNYRDM---------------SEAVDPRQLLDISIIQYVQQNSEIRWSFDMP 754
Query: 875 -SDVENSLVYATHKKWFYLVTNIVFE--KNGYSPYKDSDSSSHVDHLISSYGIHLKHP-- 929
SDVEN ++ + T+ V + P H++++++ K+
Sbjct: 755 PSDVENRFLFDKWDGRYRYFTSTVEPTLRPSDPPPATMAKRKHMENIMNYCLSLFKNSRS 814
Query: 930 --------KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKD 981
KQP++RA+ L RLR L +R E E Y P L+I
Sbjct: 815 KFLGECDWKQPVVRAE-LVRLRRNLLDRATEQERGEETAYYICPEP-----LRISALPPP 868
Query: 982 IGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE--------KC 1033
+ + P+I+ R+E+ L+++E L S + + L+ALT + K
Sbjct: 869 VAAFAFAFPAIISRIESYLISLEACDKLQLS------IETHLALEALTKDSDNTEEHRKE 922
Query: 1034 QERF------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
Q F + ERLE LGD FLK A LF ++ DE + +R + N NL A
Sbjct: 923 QIHFQRGMGKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTA 982
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
R L ++R Q F ++ G + G+A + ++
Sbjct: 983 VRLKLYEFVRTQGFSRRNWYPEGIKL---------------LQGKA------QPESAQNK 1021
Query: 1148 HWLHKKTIADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICIS 1199
L KTIAD+ EAL+GA + D+ KA T F+ +V S + +
Sbjct: 1022 QALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLP 1081
Query: 1200 SKSFLPLSA-SLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDA 1254
S A LD+A + LG+ F + LL AF H S+ CYQRLEFLGD+
Sbjct: 1082 SYQIAQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQRLEFLGDS 1141
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
+LD + YLY YP P LT+ + +V+N+ V V +K L++ SN L I
Sbjct: 1142 LLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISNALFGQIT 1201
Query: 1315 NYVDYM--------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
Y + + +P + + P+C L D++E+ +GAI +DS F+ V
Sbjct: 1202 RYAEEIEVAVAESADSPDAWTTTSDPPKC---LPDMLEAYIGAIFVDSNFSFEVVEDFFQ 1258
Query: 1367 SFL 1369
+L
Sbjct: 1259 RYL 1261
>gi|449295521|gb|EMC91542.1| hypothetical protein BAUCODRAFT_570103 [Baudoinia compniacensis
UAMH 10762]
Length = 1569
Score = 234 bits (597), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 199/655 (30%), Positives = 298/655 (45%), Gaps = 59/655 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ EL ++A + N I L TG GKT IAVLL+ EL Q I FL +
Sbjct: 88 REYQWELFQRAQKSNTIAVLDTGSGKTLIAVLLLKWIIDVELERRATGEQPQIAFFLVAS 147
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ V+++++ V CG S W K + +V+V +L CL H
Sbjct: 148 VTLVYQQLAVLQQNLDHPVARVCGADGVDNWSKARWMKLFVENKVIVATADVLHACLAHS 207
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASA 232
FI M+ I+LLIFDE HHA K NH YA+I+KDFY D + PRIFGMTASP+ K
Sbjct: 208 FISMKQISLLIFDEAHHA--KKNHAYARIVKDFYLSEDEGRRPRIFGMTASPIDAKTDVV 265
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS-------- 284
QA + LE+LL +++ + D +E+ V P V+QY + S +
Sbjct: 266 QA-----ASELESLLHSQIATTADMSLVEA-VKKPKEHVFQYDALPTTGSETDFLRSIKT 319
Query: 285 -------YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV 337
+ Q EI R ++ L+ +L L K+ +
Sbjct: 320 RFAVPAMFDGICRQSVEISR--HLGRWCADLYLANALSERKLPQYELEADRKYYYRD--- 374
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
G S +L ++++ + ++ + + + + A I + S + I
Sbjct: 375 -GGKRDSPMLSENEDSISTSRRTPIEIAVGSNISQLDKRQAVIRAIIAFVESEQSKHAAI 433
Query: 398 EVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH 456
E FS K+L L L+ F +CIVFV R TAR LS + + + R
Sbjct: 434 R--NETDFSPKVLGLKRFLAPEFETPSSRRCIVFVERRHTARLLSATFKRFG-VPNLRPG 490
Query: 457 FLVGVNAGLKSMSRNAMKSILE-----KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
FLVG N M + + ++ KFRSGE+N L T V EEGLDI C LVIRFD+
Sbjct: 491 FLVGANN--PEMDEDNFTTPMQVLTMAKFRSGEINCLFCTTVAEEGLDIPDCNLVIRFDM 548
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREIM 562
T+ ++QSRGRAR S++ +V+ GN +L+ +E M NR +
Sbjct: 549 YRTMIQYVQSRGRARQRNSKFLHMVEKGNSVHAELLLQVRAQERAMRRFCQLLPENRRLY 608
Query: 563 DRTSSDAFTCSEE---RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
++E R Y +S+G ++ G + L + S +P D +P +
Sbjct: 609 GNEGILETLMTKEKALRTYIEESTGTKLTYGNALVCLANFISSIPTDTDDMLQPTYIVNS 668
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ ++LP NAPI +G + AK A +A +L + L+++L+P
Sbjct: 669 HGEKFVAEVLLPGNAPIRSAIGKVCTKKLLAKCSAAWEACRELRRKEYLDEHLMP 723
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 204/479 (42%), Gaps = 91/479 (18%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L A + RN+L E E + F L PE L+I + +S P
Sbjct: 973 QPVLEAVKILLRRNMLATP--EKKELTLRTKAF--LCPE--PLRISALPPAVATSCFAWP 1026
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK-------CQERFSL---- 1039
+I+HRLE+ L+A+E ++ G + S +M L A+T + QE +
Sbjct: 1027 AIIHRLESYLIALEASKMI------GVDCSPQMALAAMTKDSDNSGDHDKQEHINFQHGM 1080
Query: 1040 ----ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
ERLE +GD FLK A F+ + +E E +R + N NL +A L Y
Sbjct: 1081 GENYERLEFIGDTFLKTATSISTFIQNPNDNEFEFHVKRMLMLCNQNLFNVAKELKLYEY 1140
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
+R F ++ G + +G+ N + S H L +KTI
Sbjct: 1141 VRSIAFSRRLWYPEGLKL---------------LEGKGA---NKQEETSVIKHSLGEKTI 1182
Query: 1156 ADVVEALVGA-FID-------------DSGFKAAT--------AFLKWIGIQVEFEASQV 1193
ADV EAL+GA ++ ++ +A T L W +E
Sbjct: 1183 ADVCEALIGAAYVTHDRPGDQWQPSHWENAVRAVTRLVNSADHTMLTWSDYIAAYEKPSY 1242
Query: 1194 TNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPS----FNRLGGCYQRL 1248
+S+ + D+A +E + F + LL AF+HPS + ++ YQRL
Sbjct: 1243 QTGEVSA-------SQRDLAEKVEREHPYHFKYPRLLRSAFIHPSQPVMYEKVPN-YQRL 1294
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV 1308
EFLGDA+LD +YL+ YP P LT+ + +V+N+ V V+ F+ L S +
Sbjct: 1295 EFLGDALLDMASIAYLFHRYPDRDPQWLTEHKMAMVSNKFLGAVCVNVGFHLHLRHSSAI 1354
Query: 1309 LSETINNYVDYMITPSSTREVKEGPR--------CPKVLGDLVESSLGAILLDSGFNLN 1359
L I DY I T+ V + PK L D+VE+ +GA +DS F+ N
Sbjct: 1355 LQHQI---ADYAIELLETKRVAGDAKDYWTTVSDPPKCLPDIVEAYVGAAFIDSNFDYN 1410
>gi|170049284|ref|XP_001855187.1| endoribonuclease Dicer [Culex quinquefasciatus]
gi|167871117|gb|EDS34500.1| endoribonuclease Dicer [Culex quinquefasciatus]
Length = 1665
Score = 233 bits (594), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 256/1023 (25%), Positives = 451/1023 (44%), Gaps = 120/1023 (11%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL--IRKPQKS---ICIFLA 112
+ R YQ ++ + +N IVYL TG GKTHIA++ I EL + KP F+
Sbjct: 13 VPRFYQSQMKDVCIAKNTIVYLPTGAGKTHIALMAIRELGRRGHLEKPLSQGGKRTFFIV 72
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLY 171
TVAL +QQA++I ++ FK + D W +E +Y+++V QILL L
Sbjct: 73 NTVALAKQQAEMIGRNVVFKTSVYTSDRDVDTWKQDRWLEEFAKYQIIVCTCQILLDVLK 132
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
H ++ M I LL+FDECHH +HP IM+ + + PR+ G++ ++ K
Sbjct: 133 HGYLAMSHINLLVFDECHHGV--GDHPMHGIMEQYLRARKEDRPRVIGLSGM-LLYKELK 189
Query: 232 AQANLPKSINSLENLLD---AKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+ + + + LEN D A V S + ++ F + P + + V +S
Sbjct: 190 MKEQVAQELERLENTFDSTIATVGSYDAYTEVCRFSTDPKEGLLSFHVV--QSSDVMRNL 247
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTT----KQLNRLHDSMKFCLENLGVCGALHAS 344
Q+ + + + L + L+ ++SL K + + + + E+LG+ G A
Sbjct: 248 QGQINDFINKVALFDLPKLLNQNKSLMRDMPKPKKVITKYFKELNYQFEDLGLFGGAIAL 307
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP- 403
L+ ++ EL + E D ++ R ++ F R + + + +E+ K+
Sbjct: 308 LGLI-----VQFELDKRES---DHTMLRLLYRSCITFCENLRHQ-LENVMQGLEIKKKLT 358
Query: 404 -FFSKKLLRLIGILSTFRLQ---QHMKCIVFVNRIVTARALSYILQNLKFLASWRCH--- 456
F S K +LI L F + + K ++FV R +A+ + ++L+ + F +
Sbjct: 359 LFSSIKARQLIAQLEGFYKEGRSRKTKTLIFVQRRFSAKVVYHLLK-IYFSETENAETIL 417
Query: 457 --FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
F+VG N + + +S + +LE+F+ E N++V T V EEG+D+Q C VI+F
Sbjct: 418 PDFMVGCNGTMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQMCNSVIKF 477
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKN--FSKEEDRMNREIMDRTSS 567
D PET AS+ QS+GRARM S Y ++DS ++RE L K + + E+ + R ++ +T +
Sbjct: 478 DYPETFASYEQSKGRARMKDSTYTVMLDS-DKREKFLKKYLLYKEIEEELRRALVGKTIN 536
Query: 568 DAFTCSEERIYKVDS---------SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
+ ++ + GA + A + LL+RYC +P D F N +
Sbjct: 537 RPEPLEADVTKELTNELIPPFYTKKGAKLDALSSIQLLNRYCMGMPRDAFTNTNVTWERH 596
Query: 619 DD--LGGTICHIILPANAPIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP- 674
DD G + ++LP + + ++ G P ++++ AK+ A +A L++ G LND+L+P
Sbjct: 597 DDKYTGKIVVAVLLPLQSTVRDKVFGQPMTNVKLAKRSAAFEACRKLYEAGELNDHLIPI 656
Query: 675 ----QEDNATE---DEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYP----- 722
Q N +E F +S G H++ P+ + P
Sbjct: 657 DSKRQLANVSEVYFRHWKQFEEESAKQAGTQKNVRNHQIRYPSQTSGCCPQPGKPCYIYV 716
Query: 723 VRLNFYFMQFIPDPADRIYR-------EFGLFVKSLLPGEAEHLK-------VDLHL-AR 767
+R+ F + + + FG+ LP A +K +++HL
Sbjct: 717 LRIAAGFNSDVQNENIETFHTLYSSENNFGIMTTKPLPVLA-RMKFFVSLGLINVHLDPT 775
Query: 768 GRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI 827
V + + +QFQ M + +L EF+ L S+ + +L++P+
Sbjct: 776 PIRVENAGSDADLAALKQFQLMLFRDVL---RLWKEFLVLD-----SSNEANSFLVVPLA 827
Query: 828 FHKNSVDWKIIRRCLSSPVFGTPG--GSVDRKSLPSHGPLQLHN---GWSSESDVENSLV 882
+DW++++ P P +V R + H W
Sbjct: 828 -QSRQIDWQVVK---DFPFLAQPSELSTVARSRMVFDAKQYRHRVILPW----------- 872
Query: 883 YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRL 942
Y T ++ Y+VT + SP+ + ++ D+ + YG + + KQ L+ K +
Sbjct: 873 YRTDRERAYVVTAVHEHLTPGSPFPNEKYQTYEDYFGTVYGQQICNKKQFLIEVKGITTW 932
Query: 943 RNLLHNRKLEDSESHELEE---YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENL 999
N L +D +S + + + L PELC F D +LLPS +HR+ L
Sbjct: 933 LNRLSPGDEDDGKSATRAKNWTFHEILIPELCH--NFAFPADYWLKATLLPSALHRINFL 990
Query: 1000 LVA 1002
L+A
Sbjct: 991 LLA 993
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 197/407 (48%), Gaps = 66/407 (16%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
++KALTT+ + + LER E+LGDAFLK++V L H EG LT + V+N NL
Sbjct: 1184 IIKALTTKSAHDVYDLERYELLGDAFLKFSVSLFLVKKHKEWHEGHLTAVKGQLVSNRNL 1243
Query: 1084 LKLAARNNLQVYIRDQPFDPC---------------QFFALGRRCPRICSK--ETERTIH 1126
L A NL ++ FDP Q A R+ K +E I
Sbjct: 1244 LYCAMLINLPGMMKIHTFDPKNDWSPPLASVPHAVKQKMASINHSARVLYKLKMSEEEIQ 1303
Query: 1127 S-QYDGRAPDDLNAEVRC-------SKGHHWLHKKTI-----ADVVEALVGAFIDDSGFK 1173
+ + +D AE+ S ++L ++ + AD +EA++G + G K
Sbjct: 1304 AGTIEKDKYEDFIAELDVQSRSLDTSPMQNYLSQQAMGDKMPADSMEAMLGVCVSTVGIK 1363
Query: 1174 AATAFLKWIGIQVEFE----------ASQVTNICISSK---SFLPLSASLDMATLEILLG 1220
+ L ++GI + E A+Q ++ SFL + +E +L
Sbjct: 1364 RSFRLLSFLGILPKKENLTTLLDDRIANQRLKADVTKNEVDSFL-----ISPGRIERILD 1418
Query: 1221 HQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ F R LLQA H S+ NR+ G YQ+LEF+GDAVLD+LI++Y+Y P + PGQLTD
Sbjct: 1419 YTFKDRTYLLQALTHASYPTNRITGSYQQLEFVGDAVLDFLISAYIYEQNPTMSPGQLTD 1478
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM------ITPSSTREVKEG 1332
LRS LVNN A + V + +++ +S L++T++ +V + IT +E
Sbjct: 1479 LRSALVNNITLACILVRHGLHLYILSESASLTDTVSKFVAFQEAHKHEITDQVNLLSEES 1538
Query: 1333 PRC----------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
RC PK LGD+ ES +GA+ LDSG +L W+++ +
Sbjct: 1539 ERCQGAMAEFVDVPKALGDVFESLIGAVFLDSGNDLEVTWRVIYGLM 1585
>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1546
Score = 233 bits (593), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 226/757 (29%), Positives = 335/757 (44%), Gaps = 119/757 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLA-- 112
R+YQ+EL ++A +N I L TG GKT IAVLL+ EL + FL
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVFV 186
Query: 113 --------------PTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYE 157
+V L QQA V+ +I V F G L W+K + +
Sbjct: 187 LLALGRCILTWCKVDSVTLAYQQAAVVRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNM 246
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPR 216
V+V +IL CL + +++M+ I LLIFDE HHA K +HPYA+I++D ++K + PR
Sbjct: 247 VIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHA--KKDHPYARIIRDSYFKAQPSQRPR 304
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
+FGMTASP+ KG +A LE LD+++ + L VS P+ +V+ Y
Sbjct: 305 VFGMTASPIDTKGDITEAATYVLSRRLETFLDSRIATTSKITLLREVVSRPIEKVWAY-- 362
Query: 277 VINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG 336
N + T +L ++ +Y K L ++ LG
Sbjct: 363 --NRLEPPFAT---ELYKLMDTRY---------------GNIKVLEGVYRFAWNASSELG 402
Query: 337 VCGALHASYILLSGD-----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
+ A + L+ D E N+LIE+ NT+ ++ VF I R +
Sbjct: 403 KWCSDRAWWHALADDVLPKLEGNINKLIES--NTM-------KAEHGAVFKDIIRIREAS 453
Query: 392 SDLSCIEVLKEPFF---------SKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALS 441
E +K FF S K+ RL LS F KCIVF + TA+ L+
Sbjct: 454 ------ETVKNYFFTDPELPGELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILN 507
Query: 442 YILQNLKFLASWRCHFLVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGL 498
+ L + + R L+GV G + M+ + L KFR+GE+N L AT V EEGL
Sbjct: 508 ELFTVLN-IPNLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGL 566
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN 558
DI C LVIRFDL T+ ++QSRGRAR S YA +V+ N +K + E+ M
Sbjct: 567 DIPDCNLVIRFDLYRTLIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMR 626
Query: 559 R--EIM--DRT------SSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHD 606
R EI+ DR D+F EE R + V S+GA ++ +++L RY S L ++
Sbjct: 627 RFCEILPEDRILHGNDHDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYE 686
Query: 607 EFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLG 666
+ P+ + +C +ILP +PI + G+P AK+ A L K
Sbjct: 687 KETVPQVTYVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNR 746
Query: 667 ALNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS 719
L+ Y LP NA + + +++Y+ +L P++ W K
Sbjct: 747 LLDGYFNSIYHRRLPAMRNA---KLAITCKRTNAYDM---------LLKPSI----WAKQ 790
Query: 720 QYPVRLNFY--FMQFIPD-PADRIYREFGLFVKSLLP 753
+ FY M +P P R +R L + LP
Sbjct: 791 RTTPTETFYGIHMSLLPSKPLSRDHRPILLLTREKLP 827
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 201/454 (44%), Gaps = 56/454 (12%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L+A+ + RNLL K+ E E F P L+I I S+ P
Sbjct: 1000 QPVLQAELVRLRRNLLD--KMTTQEKEMQTECFICAEP----LRISALPPSIVSTCLAFP 1053
Query: 991 SIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+I+ RL++ L+A+E L +F + ++ + E + + ++ + + ER
Sbjct: 1054 AIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGK-NYER 1112
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE LGD FLK A LF + DE + R + N NL A + + YIR + F
Sbjct: 1113 LEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGF 1172
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G +H + D + ++ S+G H L +KTIADV EA
Sbjct: 1173 SRHIWYPDGLTL-----------LHGK-------DHSTKL-LSEGKHALGEKTIADVCEA 1213
Query: 1162 LVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD-- 1211
L+GA + G KA +A + +V +T + S D
Sbjct: 1214 LIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKYQTEKHRGSEDDL 1273
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGG----CYQRLEFLGDAVLDYLITSYLYSV 1267
+E LG+ F + LL A HPS G CYQRLEFLGD++LD + L+
Sbjct: 1274 ARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRR 1333
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
+P P L++ + +V+N+ ++V F++ ++ SN L I +YV+ +
Sbjct: 1334 FPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEI------- 1386
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
E + L D+VE+ LGAI +DS F+ +
Sbjct: 1387 ETAQAESQGACLPDMVEAYLGAIFVDSKFDFQVI 1420
>gi|392895692|ref|NP_498761.2| Protein DCR-1 [Caenorhabditis elegans]
gi|408360292|sp|P34529.3|DCR1_CAEEL RecName: Full=Endoribonuclease dcr-1
gi|379657006|emb|CCD71200.2| Protein DCR-1 [Caenorhabditis elegans]
Length = 1910
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 275/1066 (25%), Positives = 470/1066 (44%), Gaps = 160/1066 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA ++N IV LGTG GKT IAVLL+ E + P F+ V
Sbjct: 14 RDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKRAFFVVEKVN 73
Query: 117 LVQQQAKVIEESIGFKVRTFCG----GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
LV+QQA IE FKV G G K CD + + ++ V+V+ Q LL + H
Sbjct: 74 LVEQQAIHIEVHTSFKVGQVHGQTSSGLWDSKEQCD--QFMKRHHVVVITAQCLLDLIRH 131
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVGKGA 230
++K+E + +LIFDECHHA + S HPY IM D+ K D VPR+ G+TAS + K
Sbjct: 132 AYLKIEDMCVLIFDECHHA-LGSQHPYRSIMVDYKLLKKD-KPVPRVLGLTASLI--KAK 187
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS- 289
A L + + LE+ +D+ + + D L + + P Y+ + D +
Sbjct: 188 VAPEKLMEQLKKLESAMDSVIETASDLVSLSKYGAKP----YEVVIICKDFEIGCLGIPN 243
Query: 290 -EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFC---LENLGVCGALHASY 345
+ + EI E ++ ++ H L ++ + DS+K LG A +
Sbjct: 244 FDTVIEIFDET-VAFVNTTTEFHPDLDLDPRR--PIKDSLKTTRAVFRQLGPWAAWRTAQ 300
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR-DGIASDLSCIEVLKEPF 404
+ E ++I+++ + D RF + A I R + + IE L+ P+
Sbjct: 301 VW----EKELGKIIKSQ--VLPDKTLRFLNMAKTSMITIKRLLEPEMKKIKSIEALR-PY 353
Query: 405 FSKKLLRLIGILSTFRLQ-----------QHMKCIVFVNRIVTARALSYILQNLKFLASW 453
++++RL IL TF + +H+ I+FV++ A +L +++++K SW
Sbjct: 354 VPQRVIRLFEILETFNPEFQKERMKLEKAEHLSAIIFVDQRYIAYSLLLMMRHIK---SW 410
Query: 454 RCHF-LVGVNAGLKSMSRNAMKS-----------ILEKFRSGELNLLVATKVGEEGLDIQ 501
F V + + + RN S +L +F E+N L+AT V EEG+D++
Sbjct: 411 EPKFKFVNPDYVVGASGRNLASSDSQGLHKRQTEVLRRFHRNEINCLIATSVLEEGVDVK 470
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEED----- 555
C LVI+FD P + S++QS+GRAR S Y V+ + D +K+F + E
Sbjct: 471 QCNLVIKFDRPLDMRSYVQSKGRARRAGSRYVITVEEKDTAACDSDLKDFQQIEKILLSR 530
Query: 556 --RMNREIMDRTSSDAF----TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
+N I D SD F S+ Y V+ +GA + ++L++RYCSKLP D F
Sbjct: 531 HRTVNNPIED--DSDRFEEFDVDSQMEPYVVEKTGATLKMSTAIALINRYCSKLPSDIFT 588
Query: 610 N--PKPKFYYFDDLGGT--ICHIILPANAPI-HQIV-GTPQSSMEAAKKDACLKAIEDLH 663
P + ++ G T ++LP N+PI H IV P + + A+ L+A LH
Sbjct: 589 RLVPHNQIIPIEENGVTKYCAELLLPINSPIKHAIVLKNPMPNKKTAQMAVALEACRQLH 648
Query: 664 KLGALNDYLLPQEDNA-------TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW 716
G L+D LLP+ + ++EP ++ + G R +L++ + L +S+
Sbjct: 649 LEGELDDNLLPKGRESIAKLLEHIDEEPDEYAPGIAAKVGSSKRKQLYDKKIARALNESF 708
Query: 717 TKSQ-----YPVRLN-FYFMQFIPDPADRIYRE-------FGLFVKSLLPG--------E 755
++ Y L F + +P R + + FG +P
Sbjct: 709 VEADKECFIYAFELERFREAELTLNPKRRKFEDPFNYEYCFGFLSAKEIPKIPPFPVFLR 768
Query: 756 AEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQE-MFLKVILDRSEFNSEFVPLGKDDYCE 814
++KV L +A ++ +T + + + Q F +F +V+ N EF D
Sbjct: 769 QGNMKVRLIVAPKKTTVTA---AQLQEIQLFHNYLFTQVLQMCKTGNLEF-----DGTSN 820
Query: 815 SSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS-S 873
+ +T L++P+ K+ + + I + +S V + +++P ++ + +
Sbjct: 821 APLNT--LIVPLNKRKDDMSYTINMKYVSEVV-------ANMENMPRIPKDEVRRQYKFN 871
Query: 874 ESDVENSLVYATHKKW----FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHP 929
D ++++V ++ FY V I+ E S + D+ + ++ I Y + +
Sbjct: 872 AEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPSSKFPDTHFETFNEYFIKKYKLEIYDQ 931
Query: 930 KQPLLRAKPLFRLRNLLHNR-----------------KLEDSESHELEEYFDDLP----- 967
Q LL NLL R + + + + +E +P
Sbjct: 932 NQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNTSVPHSSQR 991
Query: 968 ----PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
PEL + I S + + ++ LPSI +R+ LL+ EL+ +
Sbjct: 992 QILVPELMDIHPI--SATLWNVIAALPSIFYRVNQLLLTDELRETI 1035
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 207/464 (44%), Gaps = 95/464 (20%)
Query: 1016 GAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVD--EGELTRR 1073
G VS +LL ALTT + SLER E +GD+FLK+A +L+ H +D EG+L+
Sbjct: 1389 GLGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLY--HTLLDQHEGKLSFA 1446
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFD-------PCQFFALGRRCPRI-----CSKET 1121
RS V+N NL +L + + I FD PC + P E
Sbjct: 1447 RSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEI 1506
Query: 1122 ERTIHSQYDGRAPD-----DLNAEVRCSKG----------------------------HH 1148
ER + Q P+ D+ +V S
Sbjct: 1507 ERILDGQVIEEKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQ 1566
Query: 1149 WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--EFEASQV-----------TN 1195
+ K+IAD VEAL+G + G + W+G++V + + S V TN
Sbjct: 1567 HISDKSIADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTN 1626
Query: 1196 ICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
S L LE +G++F R L+QAF H S+ NR+ GCYQRLEFLGD
Sbjct: 1627 PNASLNFLNNLWQQFQFTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGD 1686
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI---------- 1303
AVLDY+IT YL+ + PG LTDLRS LVNN FA++AV F K I
Sbjct: 1687 AVLDYMITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMI 1746
Query: 1304 -----------FDSNVLSETINNYVDYMITPSSTREVKEGP--RCPKVLGDLVESSLGAI 1350
FD+N +E YM+T + + PK +GD+ ES GAI
Sbjct: 1747 EKFVKLCSERNFDTNFNAEM------YMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAI 1800
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRELLELCNS 1392
LDSG NL+T W+++ + ++ +N +PIREL+E S
Sbjct: 1801 YLDSGRNLDTTWQVIFHMMRGTIELCCANPPRSPIRELMEFEQS 1844
>gi|328905041|gb|AEB54796.1| dicer 2 [Litopenaeus vannamei]
Length = 1502
Score = 233 bits (593), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 202/656 (30%), Positives = 326/656 (49%), Gaps = 72/656 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQLEL A+++N I+ LGTG GKT I++LLI EL H IR+ K +F+ TV
Sbjct: 15 RSYQLELFNCALKKNSILVLGTGSGKTFISILLIKELGHQIRESLKGGSKRTVFVVNTVP 74
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQA I++ F+V + GS + D W+ E++++EVLV++ QI L + H
Sbjct: 75 LVHQQAAAIQQHTPFEVGKY-EGSMGVDYWTDEHWQNELEKHEVLVVVAQIFLDLILHAK 133
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDF-----YKPDIMKVPRIFGMTASPVVGKG 229
+ + + LLI DECHHA +HP +IM+ + + P+ K+PRI G+TA V K
Sbjct: 134 LPLSSVNLLIMDECHHAT--GSHPMREIMRAYENLKQHSPE--KLPRIMGLTACVVHRK- 188
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ + K + SLE +D + + D E + + + P +V + + TS T
Sbjct: 189 -CKRREVLKYMESLEAAMDCALVTSVDPETVLKYTTGPKEKVICFY-TESITSDYQETVK 246
Query: 290 EQLA----EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHAS 344
QLA +I + +I+ +RK Q+ + +++ + +LG C A
Sbjct: 247 AQLAGLECDIITDCFINYKARK------------QIKKKVKNIEHIMSDLGDWCVARAIK 294
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-CRRDGIASDLSCIEVLKEP 403
Y + DET E E I + L + EV+ A + G+A+ + I
Sbjct: 295 YEIEHLDETEGME----EDPKIREILKLLKERLREVYVACELKEKGMANPVEHI------ 344
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL-----QNLKFLASWRCHFL 458
+ K+ RL+ I S + + + ++FV R TA+ L +L QN +F + + ++
Sbjct: 345 --TFKVKRLLEIFS--KCNKEVFGLIFVERRNTAKILYDLLLEIAKQNPEF-SFVKPSYV 399
Query: 459 VGVNAG------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
VG N+ L + K LE FR GE N L++T V EEG+DI+ C +V+RFD+P
Sbjct: 400 VGCNSRPGIDIRLAELELRKQKETLENFRKGETNFLISTSVLEEGVDIRKCNVVVRFDMP 459
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRE-LDLIKNFSKEEDRMN-----REIMDRTS 566
+ +++QSRGRAR S Y +V+ E L+ I + + ED + R + +
Sbjct: 460 QNYRAYVQSRGRARAKPSVYLLMVEEAKVSEMLECIGVYREIEDSLQYLCHGRNLPTAQT 519
Query: 567 SDAFTCSEERIYKVDSSGAC---ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG 623
+ +E I + G I++ + L++ YC KLP D+F + P+ G
Sbjct: 520 TRKHFAEDEYIKPYEPYGPVGPKITSNSAIQLVNLYCGKLPSDKFTDNLPEVVEEVKEGM 579
Query: 624 TICHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN 678
T I LP AP+ ++ G+ ++ + AKK A L+ LH++G L+ L P+E N
Sbjct: 580 TTVGIRLPIMAPLKDMIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPKESN 635
Score = 200 bits (509), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 270/606 (44%), Gaps = 98/606 (16%)
Query: 875 SDVENSLVYATH---KKWFYLVTNIVFEKNGYSPYKDSDSS--SHVDHLISSYGIHLKHP 929
S E++L+Y + Y V++I E N + + + S+ + + YG+ +K
Sbjct: 828 SKFEDALIYPQYGIPSNQMYYVSHIFDELNPCNTFPEGKKGYESYERYFLERYGLEIKDK 887
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
QPLL AK + + N L + PE C L I + + +
Sbjct: 888 NQPLLEAKHIPKELNYLKKIPK--KAKEKKGNLVPRFVPEFCGL--IPIKASLWWQIMCM 943
Query: 990 PSIMHRLE--NLLVAIELKHLLSA--------SFPEGAEVSAEML--------------- 1024
PSI HRL NL+ +K +++ F + E+L
Sbjct: 944 PSIFHRLNSFNLMHEFIVKTKITSPAIKNEVLDFSWTKKFIYELLGSSENTVPIFLDRKK 1003
Query: 1025 ---------LKALTTEKCQE--RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
L A T ++ E F+LERLE+LGD+FLK+ G LFL ++ EG L++
Sbjct: 1004 QEYIHPFSMLHAFTLKEASEDKEFNLERLELLGDSFLKFVTGEALFLRDESYHEGRLSQS 1063
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD--- 1130
R V N L +LA + L+ I + +P + ++ + +E+ R++ +D
Sbjct: 1064 RGKLVCNKTLFRLACQKGLEGKIAAKVLNPKKNGSIPGFRIKPEFEESLRSLEVPHDFWH 1123
Query: 1131 ---------------------GRAPDDLNAEVRCSKGHHW----LHKKTIADVVEALVGA 1165
A D AE + S + W + K+IAD VEA++GA
Sbjct: 1124 QVPNTVKDVGDLKEAVFALMSDDASKDEKAEKKGSCYNPWTEHEVSDKSIADCVEAIIGA 1183
Query: 1166 FIDDSGFKAATAFLKWIGIQV-----------EFEASQVTNICISSKSFLPLSASLDMAT 1214
++ G +AA AFL W+G+ V ++V C + A LD
Sbjct: 1184 YLLVCGNEAAAAFLHWLGVGVFRDNSLLMEPKTVRTARVRKECAQDLTIFYKKAVLD--R 1241
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
LE +G+ F R ++QA H S+ N++ CYQRLEFLGDAVLDYL+T +++ +
Sbjct: 1242 LEKKIGYTFRDRSFIVQAVTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYS 1301
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK-- 1330
PGQL+DLRS V N A ++ L+ + L +I+ ++ + E+
Sbjct: 1302 PGQLSDLRSYFVKNDTLGRAAAKGKLHQHLLHLNPKLEASIDKFLSILHQDPLGEELNTE 1361
Query: 1331 ------EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFS--NLQLNP 1382
E PK LGD+VE+ +GA+ LDS +L W+++ L +L S +QLNP
Sbjct: 1362 DDVQDCEDVEIPKALGDMVEAIIGAVYLDSNRSLKVAWQVIERILGDLLNTSIQTIQLNP 1421
Query: 1383 IRELLE 1388
IR+LLE
Sbjct: 1422 IRQLLE 1427
>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1546
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 226/757 (29%), Positives = 335/757 (44%), Gaps = 119/757 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLA-- 112
R+YQ+EL ++A +N I L TG GKT IAVLL+ EL + FL
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVFV 186
Query: 113 --------------PTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYE 157
+V L QQA V+ +I V F G L W+K + +
Sbjct: 187 LLALGRCILTWCKVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNM 246
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPR 216
V+V +IL CL + +++M+ I LLIFDE HHA K +HPYA+I++D ++K + PR
Sbjct: 247 VIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHA--KKDHPYARIIRDSYFKAQPSQRPR 304
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
+FGMTASP+ KG +A LE LD+++ + L VS P+ +V+ Y
Sbjct: 305 VFGMTASPIDTKGDITEAATYVLSRRLETFLDSRIATTSKITLLREVVSRPIEKVWAY-- 362
Query: 277 VINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG 336
N + T +L ++ +Y K L ++ LG
Sbjct: 363 --NRLEPPFAT---ELYKLMDTRY---------------GNIKVLEGVYRFAWNASSELG 402
Query: 337 VCGALHASYILLSGD-----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
+ A + L+ D E N+LIE+ NT+ ++ VF I R +
Sbjct: 403 KWCSDRAWWHALADDVLPKLEGNINKLIES--NTM-------KAEHGAVFKDIIRIREAS 453
Query: 392 SDLSCIEVLKEPFF---------SKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALS 441
E +K FF S K+ RL LS F KCIVF + TA+ L+
Sbjct: 454 ------ETVKNYFFTDPELPGELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILN 507
Query: 442 YILQNLKFLASWRCHFLVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGL 498
+ L + + R L+GV G + M+ + L KFR+GE+N L AT V EEGL
Sbjct: 508 ELFTVLN-IPNLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGL 566
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN 558
DI C LVIRFDL T+ ++QSRGRAR S YA +V+ N +K + E+ M
Sbjct: 567 DIPDCNLVIRFDLYRTLIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMR 626
Query: 559 R--EIM--DRT------SSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHD 606
R EI+ DR D+F EE R + V S+GA ++ +++L RY S L ++
Sbjct: 627 RFCEILPEDRILHGNDHDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYE 686
Query: 607 EFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLG 666
+ P+ + +C +ILP +PI + G+P AK+ A L K
Sbjct: 687 KETVPQVTYVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNR 746
Query: 667 ALNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKS 719
L+ Y LP NA + + +++Y+ +L P++ W K
Sbjct: 747 LLDGYFNSIYHRRLPAMRNA---KLAITCKRTNAYDM---------LLKPSI----WAKQ 790
Query: 720 QYPVRLNFY--FMQFIPD-PADRIYREFGLFVKSLLP 753
+ FY M +P P R +R L + LP
Sbjct: 791 RTTPTETFYGIHMSLLPSKPLSRDHRPILLLTREKLP 827
Score = 124 bits (311), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 201/454 (44%), Gaps = 56/454 (12%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L+A+ + RNLL K+ E E F P L+I I S+ P
Sbjct: 1000 QPVLQAELVRLRRNLLD--KMTTQEKEMQTECFICAEP----LRISALPPSIVSTCLAFP 1053
Query: 991 SIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+I+ RL++ L+A+E L +F + ++ + E + + ++ + + ER
Sbjct: 1054 AIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGK-NYER 1112
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE LGD FLK A LF + DE + R + N NL A + + YIR + F
Sbjct: 1113 LEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGF 1172
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G +H + D + ++ S+G H L +KTIADV EA
Sbjct: 1173 SRHIWYPDGLTL-----------LHGK-------DHSTKL-LSEGKHALGEKTIADVCEA 1213
Query: 1162 LVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD-- 1211
L+GA + G KA +A + +V +T + S D
Sbjct: 1214 LIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKYQTEKHRGSEDDL 1273
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGG----CYQRLEFLGDAVLDYLITSYLYSV 1267
+E LG+ F + LL A HPS G CYQRLEFLGD++LD + L+
Sbjct: 1274 ARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRR 1333
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
+P P L++ + +V+N+ ++V F++ ++ SN L I +YV+ +
Sbjct: 1334 FPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEI------- 1386
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
E + L D+VE+ LGAI +DS F+ +
Sbjct: 1387 ETAQAESQGACLPDMVEAYLGAIFVDSKFDFQVI 1420
>gi|340372191|ref|XP_003384628.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1530
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 214/721 (29%), Positives = 329/721 (45%), Gaps = 127/721 (17%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL----IRKPQKSICIFLAPT 114
R YQ ++ + A++EN IV LGTG GKT +AV+LI E+AH + + IFLA T
Sbjct: 19 GRPYQDKMVEYAIKENTIVSLGTGAGKTFVAVMLIREMAHFAEGQFTESEGQRIIFLAHT 78
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKE-----IDQYEVLVMIPQILLY 168
V LV+QQA+ I ++ KV F G K + D W KE + VLV I L
Sbjct: 79 VPLVKQQAEYIRDNTSLKVFEFVGDPK---GNIDSWPKETWYNHFNAANVLVFSRTIFLD 135
Query: 169 CLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGK 228
L FIK + L++FDECHHA N P+ +IMK + PRI G++AS ++G+
Sbjct: 136 LLMKGFIKPRQLCLIVFDECHHAT--KNDPFVQIMKVVKDAPPEERPRILGLSAS-LLGQ 192
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+L K + +LE L + + D E++ F ++P ++ Y +++ +S
Sbjct: 193 KVKP-GDLKKGVKNLEATLMSTARTAPDMEEVLKFATNPDEKIASYESALDEPAS----- 246
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
L EI + ++ L T K L D + L +LG A A ++ +
Sbjct: 247 --LLKEIIHPPLVFLQTKIQERKGKLEETAKNL---LDDLHHILIDLGPASA--AGFVSV 299
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASE---VFAAICR----RDGIASDLSCIEVLK 401
+ E + IE +TID+ A A E +F A CR + GI D + ++ L
Sbjct: 300 AIFELRK--AIEYT-DTIDEWEKHIAWLALEKLYIFEASCRQFKTKYGILQDSNKVKTLL 356
Query: 402 EPFFSKKLLRLIGILS-----------------------------TFRLQQHMKCIVFVN 432
+ + + G +S + + ++ ++ I+F
Sbjct: 357 DEI--RDTVSANGEMSDSPPSKGTKEEAKGEEEKEEEVQKKDQKSSPQAKRALRGIIFAE 414
Query: 433 RIVTARALSYILQNLKF----LASWRCHFLVGVNAGLKSMSRNAMK-----------SIL 477
R TA LS ++Q K L C F+VG + G S NAM+ +L
Sbjct: 415 RRHTALCLSKLIQEKKKTQPDLKHVSCDFVVGHSLG---QSGNAMRKEARMKSSRQEQVL 471
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
KFR G +NLLVAT V EEG+D+ C LVIRFDLP+ S++QS+GRAR S++ L+
Sbjct: 472 GKFRKGTVNLLVATSVIEEGVDVPRCNLVIRFDLPQNFRSYVQSKGRARDKPSKFVLLLS 531
Query: 538 SGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKV-----------DSSGAC 586
+ +L I+ + + + E+++ SD SEE I K + GA
Sbjct: 532 DMEKNKLGEIRCYHQ----LETELIELCQSDRALPSEEEIQKKMADIIPPYMPNGTEGAR 587
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGT-------------------- 624
+S G ++LLHRYC +LP DE+ P F GG
Sbjct: 588 VSLGNSLTLLHRYCGRLPQDEYTKLSPHFEVKKIPKAGGRTLSLSELSLEEEDEDPNHNY 647
Query: 625 ICHIILPANAPIHQ--IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATED 682
IC + LP N P+ I P + + +++ A L A+E LHK+ ++D + ++D
Sbjct: 648 ICSLFLPINCPLRSDIIKSPPLGTKQQSQRAAALYAMEKLHKMDEVDDLFKAKASADSDD 707
Query: 683 E 683
E
Sbjct: 708 E 708
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 180/414 (43%), Gaps = 89/414 (21%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + +LERLE+LGD+FLK +L+ L EG+L+ RS V N N
Sbjct: 1106 LILQALTPRGANDSINLERLELLGDSFLKLVTSVYLYNLRPNSHEGKLSEARSRRVANIN 1165
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICS-KETERTIHSQYDGRAPDDLNAEV 1141
L L + + I F I S KE + Y
Sbjct: 1166 LFVLGKKKGITSAILSDDF-----------VSGIDSFKERLTWVPPGYAAL--------- 1205
Query: 1142 RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT---NICI 1198
+ H + K++AD VEAL+GA G + +KW GI++ +S + +
Sbjct: 1206 ---EESHKVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSS 1262
Query: 1199 SSKSFL--------------PLSASL---------------DMATLEILLGHQFLHRGLL 1229
+++S L P + L +++++ + + F + LL
Sbjct: 1263 NTRSLLLAESDSIFSSHFGSPPAPKLAFSDKAISTRNRILPQVSSIQGKIEYSFKNELLL 1322
Query: 1230 LQAFVHPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
++A H S++R + GCYQRLEFLGDA+LDYL+T ++Y +PG++T+LRS LV N
Sbjct: 1323 IEAMTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGEITELRSALVCNS 1382
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT--------------PSSTREVKEGP 1333
FA +A+ + +K L S L + Y + S + + E
Sbjct: 1383 RFAKLAISLNLHKSLCHGSPNLFNDMKKYAQSLRQREKEDMFEEMSINDNDSAQAIVESI 1442
Query: 1334 RC-----------------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD 1370
+ PK L D E+ GA+ +DSG NL TVW+ FL+
Sbjct: 1443 KDGDFDDDDDDDDDDDIEPPKSLSDCFEALAGAVFIDSGMNLQTVWEAFSPFLE 1496
>gi|425626934|gb|AFX89025.1| DCR2 [Mayetiola destructor]
Length = 1646
Score = 232 bits (591), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 268/1049 (25%), Positives = 462/1049 (44%), Gaps = 167/1049 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTV 115
+R YQ E+ KK +E N I+YL TG GKT+IA++ + A+ ++KP +FL T
Sbjct: 17 SRGYQDEIFKKCVENNTIIYLPTGAGKTYIAIMAMKHFANDLQKPISEGGKRSLFLTNTK 76
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRF 174
AL QQA+ I++ +V + G D W +E DQ++V+ QI+L + H +
Sbjct: 77 ALATQQAEYIQKLTPLRVAVYTGDLNVDAWKKDKWYEEFDQHQVITATVQIVLDIIRHGY 136
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
+K+ L++FDECH+AQ HP A +M F PR+ + S + +
Sbjct: 137 LKLSNFNLIVFDECHNAQ--GEHPMAHLMAKFTDIPERDHPRV--IGLSGSLTSSSIKPQ 192
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS--EQL 292
N+ K + LE A + +V+ L ++V V+ ++ +C EQ
Sbjct: 193 NVLKELKDLEAKFRATIVTVQG---LNAYVE-----------VLMHSTKPKESCIQFEQN 238
Query: 293 AEIKREQYISALSRKLHDHQ------SLRNTTKQ-LNRLHDSMKF--------CLE---N 334
A ++ +I + +L + + RNTT + L R+ + +F CL +
Sbjct: 239 APMEFIDFIVNKADELKNTIESWPIINTRNTTDETLKRVLELFEFSVCFIDSACLTINYH 298
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC-----RFASQASEVFAAICRRDG 389
G+ G L ++ + + EL + E +T D++ R E +G
Sbjct: 299 TGLYGGLLSTLATI-----VELELKKREADTTFDAILHRISERLYDSEEEEEEEEKETNG 353
Query: 390 IASDLSCIE---VLKEPFF-----SKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTAR 438
+ D I+ + ++P + ++ RL+ L F ++ +K ++FV R +A+
Sbjct: 354 MEIDNKTIDETNIAEDPVMILTNSTPQVQRLLIYLKKFVQDDPKRQLKGLIFVKRRYSAK 413
Query: 439 ALSYILQNLKFLASW-----RCHFLVGVNAGLKS-----MSRNAMKSILEKFRSGELNLL 488
L +I++ +F+ S+ R F+ G N + +++ +L+KF+ E+NL+
Sbjct: 414 ILCHIIR--RFMNSYPDINIRVDFMTGSNTKIPDSIETILAKKCNDRVLDKFKRDEVNLI 471
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL---- 544
V T V EEG+D+Q C LVI FD PE ++Q++GRARMP SEY +V G Q +L
Sbjct: 472 VTTSVLEEGIDLQECNLVIAFDRPEHYRQYVQTKGRARMPNSEYVIMVPMGQQLKLEQKV 531
Query: 545 -------DLIKNFSKEE--DRM--NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGV 593
D+++ + E DR+ N+E M++ + F + I GA I V
Sbjct: 532 KEWGEVNDILRQYLVERAVDRIQPNKEDMNKIAEREFNEQYKTI-----GGAVIDHFSAV 586
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH-QIVGTPQSSMEAAK 651
SLL+RYC LP D+F +P + + GG I HI+LP +PI +I G +++ AK
Sbjct: 587 SLLNRYCDVLPRDQFTDPVITWRRTEVKGGKIQVHILLPIQSPISAEICGNAMPNLKLAK 646
Query: 652 KDACLKAIEDLHKLGALNDYLLP---------QEDNATE--DEPMLFSSDSDSYEGEGSR 700
+ A KA L++ ALN+ +P Q+D + P F+ D + G
Sbjct: 647 RSAAFKACIKLYEQKALNENAMPVSSIKCMELQKDVYFDVWSSPE-FAKDQKATAGTKKN 705
Query: 701 GELHEMLVPAVLRQSWTKSQ-----YPVRLNFYFMQFIPDPADRIY-------REFGLFV 748
L E+ P L QS + Y + + F D +++ R +G+
Sbjct: 706 YRLLELQTPDALCQSMPQPNRQLFLYKIIIEPNFSTADVDDNVKVFHDLLQSNRTYGILT 765
Query: 749 KSLLPGEAEHLKVDLHLARGRSVMTKLVPS----------GIMQAQQFQEMFLKVILDRS 798
+P L + + T++ P+ + Q ++F + + +L
Sbjct: 766 MKSIPP----LSLMRFYQSFGEIKTQIDPNPMKLSINNVHDLEQLKRFNCILFRDVLG-- 819
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKS 858
+ K+ + + +F + V + NS+DW I+R F T V K
Sbjct: 820 --------VWKEFFVYDLTDSF---ITVPINGNSIDWDIVRS------FQT-WSEVKEKP 861
Query: 859 LPSHGPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHV 915
+ N +E+D + +V Y+T + Y+VT + EK +S + + S+
Sbjct: 862 ISER-----KNAIYNENDWLHRVVCKWYSTDFESRYIVTRVSNEKTPFSDFPNKTYRSYA 916
Query: 916 DHLISSYGI--HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQL 973
+++ Y + Q L+ K + R NL+H + ED + L PELC
Sbjct: 917 AYVMDKYPSIDKVVGEDQFLIEVKGITRNLNLMHPGEGEDGRRQRTNRGPETLIPELCH- 975
Query: 974 KIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
+ D+ +LPS + R+ LL A
Sbjct: 976 -NFMYPGDLWLKAIVLPSALRRIYYLLHA 1003
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 231/509 (45%), Gaps = 83/509 (16%)
Query: 948 NRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH 1007
NRKL+D + + + ++L P Q+ D S E L + + LK
Sbjct: 1104 NRKLDDMSLSDKKRHENELNPSRFQMAEFRGLLDTPSD-----------EKLAIQL-LKT 1151
Query: 1008 LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDE 1067
LS+ P G E +L A+TT + F +E E+LGDAFLK+ V L H E
Sbjct: 1152 KLSSPVPRGVE--QHDMLAAITTASAGDLFHMELFEVLGDAFLKFGVSLSLMHNHQDWHE 1209
Query: 1068 GELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ---------------------- 1105
G L+ + V N NL A + L I FDP
Sbjct: 1210 GFLSAMKGKIVGNRNLCYNAIKMKLPGMINKNNFDPKDDWQPPMFKVDDVIKNKMRQKNI 1269
Query: 1106 ----FFALGRRCPRI----CSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
F L I S++ + ++ +D ++ G + KT +D
Sbjct: 1270 SPNLLFELSLSKMEIESGKVSEQNVEMLEQTFNRYVNNDQEGSMQNVLGLQRIADKTSSD 1329
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNIC---------------ISSKS 1202
VEA++GA + G L+ I + E +T + I S
Sbjct: 1330 CVEAILGACLVSIGVDRTFKVLEMFNILPKRENVDITKLLSNQFHNPRVRTNIKDIEIDS 1389
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLI 1260
FLP + LE +G++F R LLQA HP++ NR+ GCYQ+LEFLGDAVLD+LI
Sbjct: 1390 FLP-----NHTELETNIGYKFKDRAYLLQALTHPTYPTNRVTGCYQQLEFLGDAVLDFLI 1444
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
TSY+Y P++ PG+LTDLRS LVNN A + V + + +++ + L+E I+ +VDY
Sbjct: 1445 TSYIYERCPEMDPGKLTDLRSALVNNVTLACICVRYNIHLYILSQNAALTEFISQFVDYQ 1504
Query: 1321 ITPS-----------STREVK----EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
I + ++V+ E PK LGD++E+ +GAI LDSG NL WK++
Sbjct: 1505 IAHNHEVTDHVDLLMEEKDVECKMAEYVEVPKTLGDVIEALIGAIFLDSGNNLEVTWKVI 1564
Query: 1366 LSFLDP-ILKF-SNLQLNPIRELLELCNS 1392
+ I KF +N+ L+ +R L E N+
Sbjct: 1565 YGLMQKEINKFMANVPLSIVRRLYEHENA 1593
>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor
FP-101664 SS1]
Length = 1459
Score = 231 bits (589), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 190/665 (28%), Positives = 305/665 (45%), Gaps = 80/665 (12%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R+YQ E+ +A + N+I L TG GKT I+ LLI +A ++ +FL P VAL
Sbjct: 13 LPRRYQEEIFVRAQQGNVIAALDTGSGKTFISTLLIKWIAARDVG-HNNLIVFLVPKVAL 71
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIK 176
VQQQ + I + +VR F G + D W+ E + +V VM QI L + H
Sbjct: 72 VQQQGEFIAKQTSLRVRQFSGATAHDMGDRDGWKTEFENSDVFVMTAQIFLNLITHSHWG 131
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
++ + L++FDECHH + NH Y IM+++++ + P+IFGMTASP+ +A+
Sbjct: 132 IDKVTLIVFDECHH--TRKNHAYNGIMREYFQTPVGSRPKIFGMTASPIWNPKNAAE--- 186
Query: 237 PKSINSLENLLDAKVYSV-EDAEDLESFVSSP--VVRVYQYGPV---------------I 278
S+ +LE LDAKV +V E ++L P +++VY P+ +
Sbjct: 187 --SLATLERNLDAKVIAVKEHMDELSGHSPKPTEIIQVYPAPPIKYPEYPSKSLRRLLNL 244
Query: 279 NDTSSSY-VTCSEQLAEIKREQY-ISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG 336
DT + + + L + Y + +L + ++ Q+ + D++ ++ L
Sbjct: 245 EDTPAEIGIPVDKILTRYEVTLYSLGPFGAELFLYTEVKQRVAQM--IQDALDLSMDYL- 301
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-CRRDGIASDLS 395
A Y + + +++E + D L R + F D I +S
Sbjct: 302 ----TPAQYAQTARAGPVSPDMLENVPQKLKD-LHRTLESFRDFFETPESGSDPIPIPMS 356
Query: 396 C----IEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
+ L E F + GI+ F Q+H+ A L+ IL+ + LA
Sbjct: 357 WCSPKVRKLAETLFERYTDSFQGII--FVEQRHV-----------ATCLAVILERIPLLA 403
Query: 452 S-WRCHFLVG-----VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
+ LVG A K M + ++ FR +N+LVAT V EEGLD C L
Sbjct: 404 HVIKSEQLVGHGKDTAKAHTKGMGTRNQQDTVKMFRERAINVLVATSVAEEGLDFPACDL 463
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR- 564
VIRFD + + ++QSRGRAR S + ++ G Q + + FS+ E + + +R
Sbjct: 464 VIRFDPVQHMVGYVQSRGRARHKTSTFIIMLQEGAQAQAERYLQFSQSEPHLKQVYQERD 523
Query: 565 ------------TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
T D +E Y V S+GA ++ + LL+ CS +P D+ F P
Sbjct: 524 LALKAIVEEEEDTHDDPEDLAERERYVVPSTGAVLTYTSAIGLLNHLCSLIPRDK-FTPM 582
Query: 613 PKFYYFDDLGGTI---CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
Y D+ T+ + LPA+ ++Q G P+ S + AK+ A A++ LH L +
Sbjct: 583 HVPTYTGDVSATVHLPSSLPLPADLLVYQ--GPPRRSKKEAKRAAAFLAVKSLHVLNVFD 640
Query: 670 DYLLP 674
DYLLP
Sbjct: 641 DYLLP 645
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 208/429 (48%), Gaps = 39/429 (9%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
P E+C+ ++ + I + +LP + HR+ ++ A E + ++ P ++ ++L+
Sbjct: 900 FPLEICRWALM--PEHIYRTFFVLPELCHRVTDVWRAHEAR--IALKLPP---IADDLLV 952
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+ALT +F+ +RLE LGDA LK + HL+ + EG+L + +V N LL
Sbjct: 953 QALTLPSTNAQFNNQRLETLGDAVLKLSAVVHLYNKYPHRHEGQLDAMKRVSVANRTLLA 1012
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
+L+ ++ +P Q + R + S E DDL + +
Sbjct: 1013 RGVERSLERHLSSEP----QSMRMWRY---VISSE--------------DDLFSARPSRQ 1051
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
+K++ D +EAL+GA G A +G V F NI +P
Sbjct: 1052 APRRFPRKSMQDCMEALLGASFATGGIDMALHAGTVLG--VSFGGPTPWNIRYGL--LMP 1107
Query: 1206 LS-ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSY 1263
S S TL+ LG++F H LLL+A HPSF YQRLEFLGDA++D ++T Y
Sbjct: 1108 KSEPSPLFLTLQEALGYRFEHGQLLLEAVTHPSFGSADSSSYQRLEFLGDALIDMVVTEY 1167
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMIT 1322
LY +P+ GQL+ RS V A A++AV++ +K L+ ++ LS I YV +
Sbjct: 1168 LYKKFPEATSGQLSWARSRAVCGTALASLAVNRLGLHKLLLINNVELSIAIGRYVPILEE 1227
Query: 1323 PSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNL 1378
++ + +G + PK L D+ ES +GA+ +D +N + ++ ++ ++ +L
Sbjct: 1228 ITNEEIILDGWKHDPPKALSDVFESVMGALFVDCDYNYDKAAAVIEMVMEDLIGALRPDL 1287
Query: 1379 QLNPIRELL 1387
+P+ +L+
Sbjct: 1288 PRDPVSQLM 1296
>gi|451856503|gb|EMD69794.1| hypothetical protein COCSADRAFT_341850 [Cochliobolus sativus ND90Pr]
Length = 1575
Score = 230 bits (587), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 289/1071 (26%), Positives = 455/1071 (42%), Gaps = 211/1071 (19%)
Query: 426 KCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMS---RNAMKSILEKFRS 482
+CIVFV + TAR L I + RC LVGVN+ + RN + ++ KFR
Sbjct: 467 RCIVFVEQRQTARLLQLIFSQIGG-PHLRCSVLVGVNSREHEQNISLRNQIITV-AKFRR 524
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN-- 540
GELN L AT V EEGLDI C LV+RFDL T+ +++QSRGRAR S+Y +++ GN
Sbjct: 525 GELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRGRARHRNSKYLHMIEEGNHD 584
Query: 541 --QRELD------LIKNFSKE--EDRMNREIMDRTSSDAFTCSEERIYK--VDSSGACIS 588
+R +D +++ F +E +DR E D S D T E+++Y + GA +S
Sbjct: 585 HRERVMDVKLDEQVMRQFCRELPQDRHIDE-YDNDSMDLLTF-EDQLYPSFITKLGAKLS 642
Query: 589 AGYGVSLLHRYCSKLPH-DEFFNPKPKFYYFDDLG---------GTICHIILPANAPIHQ 638
+++L+ + + LP D +P + DL G + +ILP ++P++
Sbjct: 643 FRSSLAILNHFVATLPGPDRQTMLQPTYVVCPDLNYDGLDPQRRGFVSEVILPEHSPVNT 702
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG 698
+G QS AK A KA +L+K G L+D LLP T + + ++ GE
Sbjct: 703 TIGDVQSKKAIAKCSAAYKACLELYKKGYLDDNLLP-----TTIKRLPAGRNALLALGEK 757
Query: 699 SRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPA--DRIYREFGLFVKSLLPGEA 756
+G ++ P + + P L F+ + A DR ++ G ++ LP
Sbjct: 758 KKGRYPMLIKPEFWQVG--RGLDPTSL---FLTIVDLDAGLDRPHQPLGFLTRNRLPKLP 812
Query: 757 EHLKVDLHLARG-------RSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEF----- 804
E ++L G RS M L P + + L++ D +N EF
Sbjct: 813 E---FPIYLTDGRPSNIVSRSSMVSL-PVSVEMLEIVTVFTLRIYKDI--YNKEFEKNAQ 866
Query: 805 ------VPLGKDDYCE-SSSSTFYLLLPV-----IFHKNSVDWKIIRRC--LSSPVFGTP 850
VP+ D SS +T +L + +F++ + W + + L + F P
Sbjct: 867 NMSYWVVPVHSDRASSLSSVTTLDQILDMDQLSRVFYQPTWRWTLDTKPEDLINRYFVDP 926
Query: 851 GGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSD 910
G R P + V L HK +++I+ Y DS
Sbjct: 927 GNGGRRYYSERFAP-----HLKPQDPVPKGLARQGHK----FMSSIL-------DYSDST 970
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPEL 970
+ S I + QP+L+A+ + RN L ++ED E E F +L +
Sbjct: 971 WT-------RSRNISKWNQSQPVLQAEKIPLRRNQL--ARIEDKEKGE----FGNLKAYI 1017
Query: 971 C--QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKAL 1028
C +I + +LP+I+HR E+ L+A+E ++L+ +V+ + L++L
Sbjct: 1018 CPEPFQISNLATPFVVMCYVLPAIIHRFESYLIALEACNVLN------LKVNPALALESL 1071
Query: 1029 TT------EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
T E +E+ + ERLE LGD FLK A +F+ +E E RR
Sbjct: 1072 TKDSENSEEHDEEKINFKSGMGPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRR 1131
Query: 1075 SNAVNNSNLLKLA-----------ARNNLQV--YIRDQPFDPCQFFALGRRCPRICSKET 1121
+ N NL++ A +LQ+ YIR + F ++ G +
Sbjct: 1132 MEMLCNKNLMETAVGKKKVVSAEGTEQDLQLYKYIRTESFSRRTWYPEGLKL-------- 1183
Query: 1122 ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID------------- 1168
+ + ++ DD K H L K+IADV EA +GA +
Sbjct: 1184 ---LKGKGANKSQDD------WLKLTHNLGDKSIADVCEAFIGAALQEHYTGGLWKPTDW 1234
Query: 1169 DSGFKAATAFL--------KWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILL 1219
D KA F KW +EA Q + S +A LDMA +E+
Sbjct: 1235 DEAVKAVKLFANSPDHTMSKWSDY---YEAYQKPKYQTADAS----AAMLDMAQKIEMKH 1287
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQL 1276
+ F + LL AF HPS+ + YQRLEF GDA+LD ++LY YP P L
Sbjct: 1288 PYHFKYPRLLRSAFAHPSYPYMYENIPSYQRLEFAGDALLDMAFITHLYFKYPDKDPHWL 1347
Query: 1277 TDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY--------------VDYMIT 1322
T+ ++ +V+N+ V V ++ + ++ L+ I +Y VDY +T
Sbjct: 1348 TEHKTPMVSNKFLGAVCVKLGWHVHIKQNTATLTNQIRDYVLEAEEAEREAGGAVDYWVT 1407
Query: 1323 PSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
S PK L D++E+ + +I +DS F+ V L P
Sbjct: 1408 ISDP---------PKCLADVIEAYVASIFVDSEFDFGVVQTFFEMHLKPFF 1449
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 126/223 (56%), Gaps = 11/223 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R YQ EL ++A EN+I L TG GKTHIA LL+ EL H R + FL +
Sbjct: 118 RDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVLDMELDHRARGGIPRMAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V+ + V CG L S W+ D+ +V ++L+ C+ H
Sbjct: 178 VNLVFQQANVLRCGLDQNVEGICGSMGASLWSKSTWQSYFDKNMAIVCTAEVLVQCMMHS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGAS 231
FI M I LLIFDE HHA KSNHPYA++MKD+Y + D+ + PRIFGMTASPV KG S
Sbjct: 238 FIAMSQINLLIFDEAHHA--KSNHPYARLMKDYYLQETDVSQRPRIFGMTASPVDTKGLS 295
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY 274
A ++ ++ +LE LL +K+ + ++ + +S P V Y
Sbjct: 296 AD-HIKEAARNLEKLLHSKIATTTESTLASNSISRPDEEVAMY 337
>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1561
Score = 229 bits (584), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 192/663 (28%), Positives = 312/663 (47%), Gaps = 90/663 (13%)
Query: 53 KDPKQI---ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR-------- 101
KD KQI R+YQ+EL ++A NII L TG GKT IA LL L H+++
Sbjct: 129 KDTKQIIGAPREYQIELFERAKMRNIIAVLDTGSGKTLIAALL---LQHVLQNEVEDRAA 185
Query: 102 -KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVL 159
KP++ I FL V+LV QQ V+E ++G V FCG + SH W ++ ++ +V+
Sbjct: 186 GKPRR-IAFFLVDKVSLVFQQHAVLECNLGHSVARFCGDMLDSMWSHEFWAQQFEENKVV 244
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRI 217
V IL CL H +I+M+ I LLIFDE HH K +HPYA+I+KD+Y +PD+ K P+I
Sbjct: 245 VCTAAILQKCLAHSYIRMDQINLLIFDEAHH--TKKDHPYARIIKDYYIKEPDMEKRPKI 302
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYG- 275
FGMTASPV AQ ++ + LE LL +++ ++ ED+ L++ + + + YG
Sbjct: 303 FGMTASPV-----DAQTDVKIAAARLEGLLHSEIATIPEDSTSLKAHARNIMEKDVFYGM 357
Query: 276 ---PVINDTSSSYVTCSEQLAEIKRE-----QYISALSRKLHDH-QSLRNTTKQLNRLHD 326
P + +E Q S L L D L T + RL +
Sbjct: 358 LPMPFETELYRKVAGLVRHNCHFGKELFFARQATSFLGPWLSDRLWKLFLTDTTILRLTN 417
Query: 327 SMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
L + G A+ + +R + + + + + +L +++ ++ +
Sbjct: 418 RTDMTYYGLDMTGKEAAAV------QKLREIVKDHDFSEVLPTLDHLSTKVLRLWEELQA 471
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
R +D CI + +RL +L T +Q + F+N
Sbjct: 472 RFSKPTDHKCIVFVD--------MRLTALLLTDLFRQEATKLPFLN-------------- 509
Query: 447 LKFLASWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
FL+G ++G +MS + KFR G++N L AT+V EEG+DI C
Sbjct: 510 --------AEFLIGSRPDSGAANMSFKEQVLTISKFRHGKVNCLFATQVAEEGIDIPDCS 561
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR----- 559
+VIRFDL + +IQS+GRAR +SEY ++ GN R + ++ M R
Sbjct: 562 IVIRFDLYRSAIQYIQSKGRARRAESEYLTFIEGGNGRHTRTVAQAQCDQVTMRRFCTAL 621
Query: 560 ------EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL--PHDEFFNP 611
+D T+ ++++ Y + S+GA ++ + +L + S L +DE
Sbjct: 622 PEDKKISGVDMTALFLHGEAQKKTYVIASTGATLTWMSSLEVLSNFTSSLRQSNDEVL-- 679
Query: 612 KPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
P++ ++ + + LP +PI + G P S+ + A+ A + ++L K ++D
Sbjct: 680 APEYVVVNEGQKFLAEVQLPPRSPIQTMAGNPHSTKQDARCSAAFEMCKELIKKKYIDDR 739
Query: 672 LLP 674
L P
Sbjct: 740 LRP 742
Score = 136 bits (343), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 194/432 (44%), Gaps = 72/432 (16%)
Query: 989 LPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL-- 1039
P+I+HR++++++A++ KHL + ++ L+A+T E QE+ +
Sbjct: 1046 FPAIIHRMDSVMIALDACKHL-------NLTIRPDLALEAMTKDSDNNDEHDQEKINFQS 1098
Query: 1040 ------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
ERLE LGD FLK A +F DE + +R + N NL A LQ
Sbjct: 1099 GMGKNYERLEFLGDCFLKMATTIAIFTSKPDDDEFQYHVQRMLLICNQNLFNKAVDRGLQ 1158
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKK 1153
Y+R Q FD ++ G + R G+ N H L K
Sbjct: 1159 EYVRSQSFDRRSWYPQGLKLMR---------------GKQGQPANK--------HALADK 1195
Query: 1154 TIADVVEALVGA----FID----DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL- 1204
+IADV EAL+GA + D D +A TA +K ++ V F
Sbjct: 1196 SIADVCEALIGAAYLSYADSDNYDMAIRAVTAMVKEKTHRMTSWGDYVAGYRHPEWQFRK 1255
Query: 1205 PLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGGC---YQRLEFLGDAVLDYLI 1260
P DMA +E +G++F LL AF HPS+ R YQRLEFLGDA+LD +
Sbjct: 1256 PTPIQRDMAQQVEESMGYKFKSPALLRSAFHHPSYPRAYESLPDYQRLEFLGDALLDMVC 1315
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
+L++ +P P LT+ + +V+NQ A+++V +K ++ ++ + YV +
Sbjct: 1316 VDFLFNKFPNADPQWLTEHKMAMVSNQFLASLSVKLGLHKHILVGTSAMLSQKEEYVSSL 1375
Query: 1321 ITPSSTRE--VKEG----------PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSF 1368
+ E + G PK L D++E+ +GA+ +DSG++ N V K
Sbjct: 1376 NLAMAEAESGAESGMFSQDYWINVKHSPKYLSDVLEAYVGAVFVDSGYDYNEVRKFFDKH 1435
Query: 1369 LDPILKFSNLQL 1380
+ P F+++ L
Sbjct: 1436 IRPF--FTDMSL 1445
>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora
B]
Length = 1702
Score = 228 bits (582), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 202/675 (29%), Positives = 317/675 (46%), Gaps = 94/675 (13%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPTVA 116
+ R+YQ E+ +A E N+I L TG GKT+I+ LLI ++ +R Q I +FL P VA
Sbjct: 14 LPRRYQEEIFSRAQEGNVIAALDTGSGKTYISTLLIRWIS--VRDAGQGKIIVFLVPKVA 71
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
LV QQ I + +V FCG + + W KE++ +VLVM Q+ L L H
Sbjct: 72 LVDQQGDFIAKHTPLRVSKFCGATAIDMADRPGWLKELENVDVLVMTAQLFLNILTHGHW 131
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
++ ++L++ DECHH + NH Y IM+++++ K P+IFGMTASPV + +
Sbjct: 132 GLDKVSLMVIDECHH--TRKNHAYNGIMREYFQLPTRKRPKIFGMTASPVWNPRDAQE-- 187
Query: 236 LPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
S+ +LE LDAKV +V + ++L++ P V++Y P + Y TC+
Sbjct: 188 ---SLLTLERNLDAKVMAVRQHVDELKAHAPKPKEWVHEYPPS-PEVYLEYPTCT----- 238
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
L +L + + ++ + L++LG GA + L D
Sbjct: 239 ---------LWERLSAITIPPDVDIPVEKIRARYEVTLQSLGPYGA----DLFLYTDLRQ 285
Query: 355 R-NELIE--AEGNTIDDSLCRFASQASEVFAAICRRDG-IASDLSCIEVLKEPFF----- 405
R +LIE EGN +D + Q +V+ A D + + +EV+ + F
Sbjct: 286 RIAQLIEQTMEGN-LDTLAIKQYYQDGDVYMAPAFADVLLPPQVQELEVILDDFRELFED 344
Query: 406 ----------------SKKLLRLIGIL-----STFRLQQHMKCIVFVNRIVTARALSYIL 444
S K+ LI IL STF + I+FV + A L+ +L
Sbjct: 345 SANPDVVPVTVHLKWCSPKVRILIDILFDQYTSTF------QGIIFVEQRHVAACLAKML 398
Query: 445 QNLKFLASW-RCHFLVGVNAG-------LKSMSRNAMKSILEKFRSGELNLLVATKVGEE 496
+ L+ R L+G G K M+ + +++ FR ++NLLVAT V EE
Sbjct: 399 PRVPQLSHLIRSAQLIGHGTGNSMYKIRGKGMAVRNQQDVVKLFREKQINLLVATSVAEE 458
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS----- 551
GLD C LVIRFD + + ++QSRGRAR S + +V+ G++ + + FS
Sbjct: 459 GLDFPACDLVIRFDPLQHMVGYLQSRGRARHQTSTFIIMVEQGHEAHIARYRAFSESEPQ 518
Query: 552 -------KEEDR----MNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYC 600
+EE R ++ E+ + D +E + V S+GA ++ LLH+ C
Sbjct: 519 IRQAYQTREEPRNVSDLSEEVEEGEIIDPQDVAERERFVVPSTGAVLTYTSASGLLHQLC 578
Query: 601 SKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS-SMEAAKKDACLKAI 659
+ +P D F P Y D TI + P H + P+ S + AK+ A A+
Sbjct: 579 ALVPRDR-FTPVALPKYEGDFISTIRLPLSLPLPPEHLVYTGPEKRSKKEAKRAAAFLAV 637
Query: 660 EDLHKLGALNDYLLP 674
++LH L ++DYLLP
Sbjct: 638 KNLHVLNVIDDYLLP 652
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 217/486 (44%), Gaps = 58/486 (11%)
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
P +C ++ S+DI + +LP + HRL ++ A + L ++ +++++
Sbjct: 908 PQRMC--RVAHLSEDIFRTFHVLPELCHRLTDVWRARTARAELGLP-----PIADDLMVQ 960
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALT F+ + LE LGDA LK HLF + EG+L R V N LL
Sbjct: 961 ALTLPAAAAGFNNQLLETLGDAVLKLGAAVHLFNKYPHRHEGQLDMLRRTCVCNRTLLAR 1020
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY---DGRAPDDLNAEVRC 1143
+ L+ Y+ + ET+ +Y +G P D
Sbjct: 1021 GLEHGLEQYL---------------------TSETQHIRAWRYIAPEGHDPSDPRPYRHA 1059
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSG----FKAATAFLKWIGIQVEFEASQVTNICIS 1199
++ +++I D +EA +GA G +A TA G + + A +
Sbjct: 1060 ARS---FPRRSIQDCMEATLGAAFATGGIQMALRAGTALGLSFGGPLPWTARYGGRL--P 1114
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL-GGCYQRLEFLGDAVLDY 1258
+K PL L+ +LGHQF H LLL+A HPSF YQRLEFLGDA++D
Sbjct: 1115 AKDASPL-----FTELQEVLGHQFKHGQLLLEAVTHPSFGSYETTSYQRLEFLGDALIDL 1169
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD-QSFYKFLIFDSNVLSETINNYV 1317
++ YLY YP+ GQL+ RS V A A VAV+ +K ++ ++ LS I YV
Sbjct: 1170 VVMRYLYFKYPRATSGQLSWARSRAVCASALAWVAVNCLELHKMMLVNNVGLSVAIGKYV 1229
Query: 1318 DYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGFNLNTVWKIM-LSFLDPILK 1374
+ S+ + G + PK + D++ES LGA+L+D G++ ++ L+ D +
Sbjct: 1230 PILKEISNIDIINNGWKQDPPKAISDVLESVLGAVLVDCGYDFEKAAAVVELTMADLLAV 1289
Query: 1375 FS-NLQLNPIRELLELCNSY---DLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNL 1430
+ +L +PI EL+ + + P LK+ + + D DV A NL
Sbjct: 1290 LTPDLPRDPISELMVWAAQSKCCKITFRRPELKRHDAY----SIIAHDIDVVGPVTAPNL 1345
Query: 1431 SRKEAI 1436
R + +
Sbjct: 1346 PRAKGL 1351
>gi|121714731|ref|XP_001274976.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
gi|158706439|sp|A1C9M6.1|DCL2_ASPCL RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119403130|gb|EAW13550.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
Length = 1389
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 201/677 (29%), Positives = 310/677 (45%), Gaps = 103/677 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + +M+ENIIV + TG GKTHIAVL I A L P I FLAPTVAL
Sbjct: 16 ARNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK--AELDSCPPDKIIWFLAPTVALC 73
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ KVI ++ + RT G K W+ + V+V +L L H F+
Sbjct: 74 TQQHKVIASNLPAVQTRTLTGLDKVELWTEQAIWDAILKDVRVVVSTYAVLADALSHGFM 133
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGA 230
+M +AL+IFDE HH K H KIM+DFY P + K VPRI G+TASPVV
Sbjct: 134 RMSRLALIIFDEAHHCMRK--HAANKIMQDFYHPTVSKFGPSAVPRIMGLTASPVVRSNR 191
Query: 231 SAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGP-------VINDTS 282
+ + ++E LDA + ++L F P ++ Y P V + T
Sbjct: 192 -------EELFTIETNLDAVCKTPRAHRQELLKFSHRPELKQLLYEPPDPMGLQVSSQTL 244
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLEN 334
+ + E L +I+ + Y+ L + D +L +QL R D + E
Sbjct: 245 RALIEAWETL-DIEDDPYVKRLRKSSLDGGALEKALMTGKTFCREQLKRFVDRSRHIFEE 303
Query: 335 LGVCGALHASYILLSGDET------MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
LG A + Y + +T M + EAE + L + + ++
Sbjct: 304 LGEWAADYYIYTSIQHLKTRVQTSYMTGDWDEAERAYLVSFLSKLPAADIQI-------- 355
Query: 389 GIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NL 447
SD +C+ + S KL LIG L ++FV + T ++ +L +
Sbjct: 356 -TLSDAACLRI------SPKLEALIGFLDAMD-DPEFSGLIFVKQRATVSVMTDLLAVHP 407
Query: 448 KFLASWRCHFLVGVN--AGLKS-----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ +R VG + +G K +S + S L+ FRSG NL++AT V EEG+DI
Sbjct: 408 RTRERFRSAAYVGWSNSSGSKDFLGNLLSMHGQLSTLDDFRSGHKNLIIATDVLEEGIDI 467
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNFS 551
C +V+ +D P + SF+Q RGRAR QS YA + + + E +I+ +
Sbjct: 468 SACSVVVCYDKPPNLKSFVQRRGRARQKQSTYAIMFPAEDSAFDLAKWQTLEQAMIEAYQ 527
Query: 552 KEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK 602
+E +R+N E+++R + V+S+ A ++A ++ LH +C+
Sbjct: 528 DDERHLQSAIELERVNEEVVER-------------FTVESTSAVLTADTAMAHLHHFCAV 574
Query: 603 LPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS-----SMEAAKKDACLK 657
LP + + +P F D+ I++ N +H V + + AA K+A +
Sbjct: 575 LPSQPYVDMRPVFSVETDIANLRRGIVILPNC-VHPKVRRSEGQRWWRTERAAMKEAAFQ 633
Query: 658 AIEDLHKLGALNDYLLP 674
A + L++ G +ND LLP
Sbjct: 634 AYKSLYEFGLVNDNLLP 650
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 200/473 (42%), Gaps = 90/473 (19%)
Query: 938 PLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIG----------FSKDIGSSLS 987
P R RNLLH + L + +LE +D P + +++ + FS I L
Sbjct: 851 PFPRRRNLLHRQTLA---TKKLENDKEDTPEPVNKMRTVAADQCTIDRLPFSNAI---LG 904
Query: 988 LLPSIM-HRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L S++ +LE L+A +L + + S + ++ A++ Q + +R E LG
Sbjct: 905 LFISVVVQQLETELIATKLYETI---LRDVGFTSTQHIITAISAPSAQALTNYQRYEFLG 961
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK++V LF H EG L+ R V N L K A L ++ + F P ++
Sbjct: 962 DSILKFSVSCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKW 1021
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
A + S+ ER G + K +ADVVEAL+GA
Sbjct: 1022 SA------PLISERLERV--------------------AGKRQVSSKVLADVVEALIGAA 1055
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLH 1225
D G AA A ++ ++ + + S+S P A + L+ + + F +
Sbjct: 1056 YMDGGHAAAQACIRRFLPEINLHSLDTRTL---SRSVAPEGARQTIHDRLKRHISYTFEN 1112
Query: 1226 RGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
LL++A HPS ++ YQRLEFLGDAVLD +I S +++ ++ G +T ++ L
Sbjct: 1113 ESLLVEALTHPSCDYDASTQSYQRLEFLGDAVLDMIIVSAIFNHPVQMPQGHMTKIKHAL 1172
Query: 1284 VNNQAFA-----------NVAVDQ-SFYKFLIFDSNVLSE----------TINNYVDYMI 1321
VN A +V+Q S +F + + L E +NN D +
Sbjct: 1173 VNANLLAFLCMEFAIPEERASVEQISTLQFEVISNEELVELWRFMRYRGLDLNNARDASL 1232
Query: 1322 TPSST------REVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
++ P P K D++ES LGAI +DSG +L
Sbjct: 1233 ARHRALRDEILHSLQHDPHYPWQALSRLSADKFFSDIMESILGAIFVDSGGDL 1285
>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1374
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 227/768 (29%), Positives = 342/768 (44%), Gaps = 139/768 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGC--------------------GKTHIAVLLIYELAHL 99
R+YQ+EL ++A +N I L TG GKT IAVLL L H+
Sbjct: 5 REYQVELFERAKSQNTIAVLDTGTCIQAQLDVIPFFSPNCTTGSGKTLIAVLL---LKHI 61
Query: 100 IR---------KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDW 149
I+ KP + I FL +V L QQA V+ ++ V F G L S W
Sbjct: 62 IQNELIDRANGKPPR-ISFFLVDSVTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTW 120
Query: 150 EKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-K 208
+ + + V+V +IL CL + +I+M+ I LLIFDE HH K +HPYA+I+++ Y K
Sbjct: 121 DHQFENNMVIVCTAEILNQCLLNSYIRMDQINLLIFDEAHH--TKKDHPYARIIRESYLK 178
Query: 209 PDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPV 268
D K PRIFGMTASP+ KG ++ +S LE LLD+K+ + L V P+
Sbjct: 179 ADPTKRPRIFGMTASPIDTKG-----DIIESATKLEVLLDSKIATTSKPNLLREVVRRPI 233
Query: 269 VRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSM 328
++Y ++ + KL+ Q L+ ++ L
Sbjct: 234 EESWEY-----------------------DKLDPPFATKLY--QILQARFGDISSLQPVF 268
Query: 329 KFCLE---NLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC 385
+F L+ LG C A A L+ D L + EGN R +Q+ C
Sbjct: 269 RFTLQASSELGPCCADRAWAYALADDV-----LPKLEGNV------RKLAQSISSPIPQC 317
Query: 386 RRDGIASDLSCIEVLKEPFFSK-----------KLLRLIGILSTFRLQQHMKCIVFVNRI 434
I+ +++K F+ +LLR ++ F KCIVF +
Sbjct: 318 ALKEISRIQEASDIVKNHSFNSPNVPGELSPKVQLLRQ-KLIKYFEHPTKTKCIVFTQKR 376
Query: 435 VTARALSYILQNLKFLASWRCHFLVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVAT 491
TA+ L + L+ + R L+GV +G + M+ + + L KFRSGE+N L AT
Sbjct: 377 YTAKMLFDLFSTLE-IPYLRPGVLIGVRSGDIVGMNVSFRQQFLALVKFRSGEINCLFAT 435
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ---------R 542
V EEGLDI C LV+RFDL T+ ++QSRGRAR S YA +++ N R
Sbjct: 436 SVAEEGLDIPDCNLVVRFDLYNTLIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVR 495
Query: 543 ELD-LIKNFSKE--EDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRY 599
E + L+++F + EDR+ I S E+R + + ++GA ++ +++L RY
Sbjct: 496 EAEKLMQSFCETLPEDRILHGIDSEIDSILQGEEEKRTFIIRATGAKLTYHSALAILARY 555
Query: 600 CSKL----PHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDAC 655
S L +++ + + + +C +ILP +P+ + G P S AAK+ A
Sbjct: 556 ASSLVRTVQYEKETSAQATYVVLPQNNSFVCEVILPEKSPVRGLTGVPASKKSAAKQSAA 615
Query: 656 LKAIEDLHKLGALNDYL-------LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLV 708
L K L+D+ LP NA + +S SR ++ML
Sbjct: 616 FDTCVLLRKHKLLDDHFNSVYHRRLPAMRNAR----LAITS---------SRTNQYDMLS 662
Query: 709 PAVLRQSWTKSQ--YPVRLNFYFMQFIP-DPADRIYREFGLFVKSLLP 753
L W K Q P +L + FIP +P R +R L + LP
Sbjct: 663 KPSL---WGKQQGTLPEKLFATVISFIPSEPLRRRHRSIILLTRERLP 707
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 211/486 (43%), Gaps = 83/486 (17%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
+QP+L + + RNLL K+ D+E F + P L+I ++I +S
Sbjct: 878 QQPVLEVELVRLRRNLLD--KMTDTEKDVETRCFVCIEP----LRISAIPEEIAASCLAF 931
Query: 990 PSIMHRLENLLVAIELKHLLSAS---------FPEGAEVSAEMLLKALTTEKCQERFSLE 1040
P+I++RL+ L+A+E L S F + ++ + E ++ + ++ + + E
Sbjct: 932 PAIINRLDAYLIALEGCKTLDLSVKPEYALEAFTKDSDNTEEHRVQQIHVQRGMGK-NYE 990
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
RLE LGD FLK A LF+ + DE + R + N NL A + L Y R +
Sbjct: 991 RLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYTRSRG 1050
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVE 1160
F ++ G T+ D R ++AE + H L +KT+ADV E
Sbjct: 1051 FSRHTWYPDG------------LTLLHGRDHRK--KISAESK-----HALREKTVADVCE 1091
Query: 1161 ALVGAFIDDSGF--------KAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSASLD 1211
AL+GA + G KA TA + + A ++ + ++ P LD
Sbjct: 1092 ALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSSYMLPKYQTQSPDGYELD 1151
Query: 1212 MA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSV 1267
+ +E LG++F + LL AF HPS+ CYQRLEFLGD++LD + L+
Sbjct: 1152 LGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYR 1211
Query: 1268 YPKLKPGQLTD------------------LRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
YP P LT+ L+ +V+N+ +AV + L SN L
Sbjct: 1212 YPDKDPQWLTEHKVSVRLFVSTKHLLTITLQMAMVSNKFLGALAVKLGLHTHLRHFSNPL 1271
Query: 1310 SETINNY--------------VDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
I +Y VDY + +V+ RCP L D+VE+ LGA +DS
Sbjct: 1272 QSQITHYAEEIQAAENESQGAVDYWLVTKDPPKVR---RCPGCLPDMVEAYLGAAFVDSD 1328
Query: 1356 FNLNTV 1361
F V
Sbjct: 1329 FQFRVV 1334
>gi|242809985|ref|XP_002485488.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218716113|gb|EED15535.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1420
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 360/1498 (24%), Positives = 609/1498 (40%), Gaps = 249/1498 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++ +N IV + TG GKT IAVL I E L R K + FL PTVAL +
Sbjct: 25 RAYQQEMLAESLRQNTIVAMETGSGKTQIAVLRIQE--ELSRCSPKKLVWFLTPTVALAE 82
Query: 120 QQAKVIEESIG-FKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ VI + + ++ R G + W+K + ++V PQ+LL + H F+K
Sbjct: 83 QQYTVISKQLPIYQSRLLLGSDNVDHWSTQQIWDKILLNIRIVVSTPQVLLDAMCHGFVK 142
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASAQ 233
+ ++LL+FDE H VK++ P+ IM+ ++ K + ++P I G+TA A
Sbjct: 143 LSGLSLLVFDEAHRC-VKAS-PFNGIMRLYHHARKSGLDELPAILGLTA-------TPAT 193
Query: 234 ANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE-- 290
+++ LE+ L A + V + E+L + P + + Y + T+ +
Sbjct: 194 KATAEAVKLLEDNLHAICRTPVIEREELLKWTHKPELSIVTYSSQSDQTTEILKGLDDIL 253
Query: 291 --QLAEIKREQYISALSRKLHDHQS------LRNTTKQLNRLHDSMKFCLENLGVCGALH 342
LA+I+ + Y+ +L K D +S L ++ K R + + V A
Sbjct: 254 ELTLADIENDPYVKSLRAKKDDKKSQEILIKLLDSGKTFTR--KEIMSLAQRAQVINAEL 311
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA--ICRRDGIASDLSCIEVL 400
S+ T + IEA + D+++ R A +++ + IA V
Sbjct: 312 GSWAADVFVVTCAEKFIEAAVHRSDNNIFRQWEDAEKIYMMQYLSMLPAIAKTRVWGSVP 371
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
S+K LI ++ + IVF + T L+++L + +G
Sbjct: 372 DH--ISQKAKSLITTIAN-TYNPGYRVIVFAEQRATVIMLAHLLSVHPLTKGIVTKYFLG 428
Query: 461 VNAGLKSMSRN--------AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
N+ + N K +L + R G+ N+L+AT V EEG+D+ C +VI FD P
Sbjct: 429 -NSNYANRKSNITELSTLVEQKDVLTELRVGKTNVLIATNVLEEGIDVPACNIVICFDPP 487
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE-------DRMNREIMDRT 565
+ + SFIQ RGRAR QS +D GN + L K S EE D M RE+ +
Sbjct: 488 KDLRSFIQRRGRARDRQSRLVLFID-GNDDD-GLAKWESMEEKLKEIYADNM-RELKEIK 544
Query: 566 SSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD---LG 622
+ + I KV S+ A ++ L +C+ + + N +P++ LG
Sbjct: 545 ALEDIEEESTEILKVPSTEAVLNHQNAQPFLAHFCATVSYAHTTN-QPEYIIERQEVSLG 603
Query: 623 GT--ICHIILPANAPIHQIVGTPQS---SMEAAKKDACLKAIEDLHKLGALNDYLLPQE- 676
T ++LP+ V +S + +AAK+DA +A L+ G ++D L+P
Sbjct: 604 FTQITAKVVLPSYIDPSLRVAFSKSKWRTEKAAKRDAAFQAYIALYDAGMVDDNLMPIHR 663
Query: 677 -------DNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF 729
A E +P L S+ + +L +P + P R+ YF
Sbjct: 664 KKYADAVTTAQEKKPKLIEV-SECWNPWNDIAQLRRDDMPLI----------PTRV--YF 710
Query: 730 MQFIPDPADRIYREFGLFVKSLLPGEAEHL-----KVDLHLARGRSVMTKLVPSGIMQAQ 784
Q P+P + L + + +P + E + K+ L + T+L +
Sbjct: 711 NQ--PNPLG--IPDMMLLLPTRIPSDCEFVLFWNQKITLKVKICNDRNTRLGFDSEQATR 766
Query: 785 QFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSS 844
+MFL + + ++ VP K DY + L +PV + L+S
Sbjct: 767 FTHDMFL------AAYQNKVVP-TKSDYITLFWPSGALEMPV------------EKWLAS 807
Query: 845 PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWF--YLVTNIVFEKNG 902
+ GT GP H ++ + + T +K+ + + IV
Sbjct: 808 -ITGT------------MGPFTRHGHLFTKEQMRELGMARTSEKYSRPFFIEQIVETSTD 854
Query: 903 YSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEY 962
+D+D+SS+ ++ +P + L + + LH ++ SE L
Sbjct: 855 DVEIQDADTSSNA----------VEPNSEPHFKGTTLPKRTDFLH--QIAQSEQLPLAHT 902
Query: 963 FDDLPP-ELCQLKII--GFSKDIGSSLSLLPSIMHRLENLLVAIELKH--LLSASFPEGA 1017
L P LC + + FSK +PSI H++E L +A L L F +
Sbjct: 903 SQQLEPVRLCHIDRLPAKFSK----FALFIPSITHKIEVLFIAERLARTVLSRVKFENLS 958
Query: 1018 EVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNA 1077
V L A++ QE +R E LGD+ LK HL + EG L+ +
Sbjct: 959 HV-----LTAISASSAQEEHDYQRYEFLGDSLLKLITSIHLVVKKPLWHEGLLSAEKDTI 1013
Query: 1078 VNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDL 1137
V+N L + A L +I + F GR+ P+ +
Sbjct: 1014 VSNGRLHRTALDLGLDKFILTKSFT-------GRKW-------------------RPNYI 1047
Query: 1138 NAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKA----ATAFL---KWIGI----QV 1186
+ ++ + KT+ADVVEAL+GA D G++ A FL W I +
Sbjct: 1048 SQFETVTEEKRQMSTKTLADVVEALLGAAFLDGGYEKLESCAKIFLPEQTWTSISDDMRT 1107
Query: 1187 EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQ 1246
+E + V+N S+ + +E +LG++F +L +A HP N YQ
Sbjct: 1108 LYEVALVSNQA---------SSHPKLGQMEEILGYKFNKPSILFEALTHPCANDGAPTYQ 1158
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF----------------- 1289
RLEFLGD++LD+ + ++ K+ + +R+ +VN
Sbjct: 1159 RLEFLGDSLLDHFVVQEFFNHPEKISHQDMHLMRTAVVNAHFLGFLCQSLYITEERSEPV 1218
Query: 1290 ----ANVAVDQSFYKFLIFD----------SNVLSETINNYVDYMITPSSTREVKEGPRC 1335
A+++ + +K ++ +N ET Y + P+ + +
Sbjct: 1219 SPGKAHISTISTEHKIYLWQLMRHGASWEITNAQQETKARYEAW--GPAVHDALMHSNKY 1276
Query: 1336 P----------KVLGDLVESSLGAILLDSGFNLNTVWKI-----MLSFLDPILKFSNLQL 1380
P K D+VES LGAI +DS +L+ + +L L I++ L L
Sbjct: 1277 PWADLFRINASKFFSDMVESLLGAIFVDSKGSLDASRQFLERISLLPCLRRIIREEVLIL 1336
Query: 1381 NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRI 1438
+P +L E S + + K+ V +D VFI C+ ++ +E +R+
Sbjct: 1337 HPFNQLHEAAISDKVQISHSVEKRLPTSPGFEDVVREDGLVFI--CSVKVAGEEIVRV 1392
>gi|158706446|sp|Q4WA22.2|DCL2_ASPFU RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1388
Score = 226 bits (576), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 317/684 (46%), Gaps = 104/684 (15%)
Query: 52 DKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL-IRKPQKSICIF 110
D P Q R YQLE+ + +M+ENIIV + TG GKTHIAVL I A L I P K + F
Sbjct: 10 DASPYQ-PRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK--AELDICSPDK-VVWF 65
Query: 111 LAPTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILL 167
LAPTVAL QQ +VI ++ + RT G K W+ ++ Y V+V +L
Sbjct: 66 LAPTVALCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVSTHAVLA 125
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTA 222
L H F+KM +ALLIFDE HH + H KIM+DFY P + K VPRI G+TA
Sbjct: 126 DALSHGFVKMSQLALLIFDEAHHCTRR--HAANKIMQDFYHPTLTKSGPAAVPRIMGLTA 183
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPV---- 277
SPVV + + +E+ LDA + ++L F P ++ Y P
Sbjct: 184 SPVVRSNH-------QELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPTDPAG 236
Query: 278 ---INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHD 326
+ T + E L +I + YI L + D ++L+ +QL R D
Sbjct: 237 FRSASLTLGALYHAWENL-DIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRRFVD 295
Query: 327 SMKFCLENLGVCGALHASYILLSG------DETMRNELIEAEGNTIDDSLCRFASQASEV 380
+ E LG A + Y + D M + EAE + D L + + S++
Sbjct: 296 RSRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMSGDWDEAEKAYLVDFLSKIPT--SDI 353
Query: 381 FAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
A+ DG S K L+ L + Q+ ++FV + VT A+
Sbjct: 354 HFALNDPDGFR-------------ISPKFESLLNFLDSSD-QREFSGLIFVKQRVTVSAM 399
Query: 441 SYILQNLKFLAS-WRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATK 492
+ +L + +RC VG + S ++ + L+ FRSG NL++AT
Sbjct: 400 TSLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATD 459
Query: 493 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-------VDSGNQRELD 545
V EEG+D+ C +V+ +D P + SFIQ RGRAR QS +A + D ++L+
Sbjct: 460 VLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSADVSRWQDLE 519
Query: 546 --LIKNFSKEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVS 594
+I+ + +E + ++ E+M+R + DS+ A ++A ++
Sbjct: 520 QAMIEAYQDDERQLQSVSALESLDEEVMERLTG-------------DSTSAVLTADMAMA 566
Query: 595 LLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQSSME-AA 650
LH +C+ LP + + +P F + + G + +ILP+ + + + G E AA
Sbjct: 567 HLHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAA 626
Query: 651 KKDACLKAIEDLHKLGALNDYLLP 674
K+ +A + L++ G +ND+LLP
Sbjct: 627 MKETAFQAYKSLYEFGLVNDHLLP 650
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 197/475 (41%), Gaps = 87/475 (18%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD-------LPPELCQLKIIGFSKDIGSSL 986
L P RN L + L +S+ +++E D + E C + + F+ I
Sbjct: 847 LECAPFPHRRNFLRRQTLANSQV-DVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLF 905
Query: 987 SLLPSIMHRLENLLVAIELKH--LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
+ +I+ +LE L+A L+ L SF S + ++ A++T + +R E
Sbjct: 906 --ISAIVEQLEIELIATRLRDTILRDVSFK-----STDHIITAISTPLAHRLTNYQRYEF 958
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+ LK++V LF H EG L+ R V N L K A L YI +
Sbjct: 959 LGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTK----- 1013
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
R+ S++ + S+ GR P + K +ADVVEAL+G
Sbjct: 1014 ----------RLASRKWSAPLISEKLGRVP-----------AKRQMSTKVLADVVEALIG 1052
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQF 1223
A D G A A ++ ++ A + +++S P SA M L+ +G+ F
Sbjct: 1053 AAYVDGGHSTAQACIRRFLPEINLHA---VDTRTAARSVAPESARHMMNDRLKDHIGYTF 1109
Query: 1224 LHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
LL++A HPS ++ YQRLE+LGDAVLD +I S +++ + G +T ++
Sbjct: 1110 EDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIKH 1169
Query: 1282 MLVN------------------------NQAFANVAVDQS--FYKFLIFDSNVLSETINN 1315
+VN +FA + +S ++F+ + L +
Sbjct: 1170 AVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARDA 1229
Query: 1316 YV--DYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+ + + + P P K D++ES LGAI +DSG NL
Sbjct: 1230 SLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNL 1284
>gi|378405592|gb|AFB82635.1| dicer-2 [Marsupenaeus japonicus]
Length = 1502
Score = 226 bits (576), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 322/656 (49%), Gaps = 72/656 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQLEL A+++N I+ LGTG GKT I++LLI EL H IR+ K +F+ TV
Sbjct: 15 RSYQLELFNCALKKNSILVLGTGSGKTFISILLIKELGHQIRESLKGGSKRTVFVVNTVP 74
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQA I++ F+V + GS + D W+ E++++EVLV++ QI L + H
Sbjct: 75 LVHQQAAAIQQHTPFEVGKY-EGSMGVDYWTDEHWQNELEKHEVLVVVAQIFLDLILHAK 133
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDF-----YKPDIMKVPRIFGMTASPVVGKG 229
+ + + LLI DECHHA +HP +IM+ + + P+ K+PRI G+TA V K
Sbjct: 134 LPLSSVNLLIMDECHHAT--GSHPMREIMRAYENLKQHSPE--KLPRIMGLTACVVHRK- 188
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ + K + SLE +D + + D E + + + P +V + + TS T
Sbjct: 189 -CKRREVLKYMESLEAAMDCALVTSVDPETVLKYTTGPKEKVICFY-TESITSDYQETVK 246
Query: 290 EQLA----EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHAS 344
QLA +I + +I+ +RK Q+ + +++ + +LG C A
Sbjct: 247 AQLAGLECDIITDCFINYKARK------------QIKKKVKNIEHIMSDLGDWCVARAIK 294
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-CRRDGIASDLSCIEVLKEP 403
Y + DET E E I + L + + EV+ A + G+A+ + I
Sbjct: 295 YEIEHLDETEGME----EDPKIREILKLLSEKLREVYVACELKEKGMANPVEHIT----- 345
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL-----QNLKFLASWRCHFL 458
F K LL + + + + ++FV TA+ L +L QN +F + + ++
Sbjct: 346 FKVKSLLEIFS-----KCNKEVFGLIFVESRNTAKILYDLLLEIAKQNPEF-SFVKPSYV 399
Query: 459 VGVNAG------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
VG N+ L + + LE FR GE N L++T V EEG+DI+ C +V+RFD+P
Sbjct: 400 VGCNSRPGIDIRLAELELRKQRETLENFRRGETNFLISTSVLEEGVDIRKCNVVVRFDMP 459
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRE-LDLIKNFSKEEDRMN-----REIMDRTS 566
+ +++QSRGRAR S Y +V+ E L+ I + + ED + R + +
Sbjct: 460 QNYRAYVQSRGRARAKPSVYLLMVEEAKVSEMLECIGVYKEIEDSLQYLCHGRNLPTAQT 519
Query: 567 SDAFTCSEERIYKVDSSGAC---ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG 623
+ +E I + G I++ + L++ YC K P D+F + P+ G
Sbjct: 520 TRKHFAEDEYIKPYEPYGPVGPKITSNSAIQLVNLYCGKFPSDKFTDNLPEVVEEVKEGM 579
Query: 624 TICHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN 678
T I LP AP+ ++ G+ ++ + AKK A L+ LH++G L+ L P+E N
Sbjct: 580 TTVGIRLPIMAPLKDMIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPKESN 635
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 274/606 (45%), Gaps = 98/606 (16%)
Query: 875 SDVENSLVYATH---KKWFYLVTNIVFEKNGYSPYKDS--DSSSHVDHLISSYGIHLKHP 929
S E++L+Y + Y V++I E N + + + S+ + + YG+ LK
Sbjct: 828 SKFEDALIYPQYGIPSNQMYYVSHIFDELNPCNTFPEGLKGYESYERYFLERYGLELKDK 887
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
QPLL AK + + N L +K+ + PE C L I + + +
Sbjct: 888 NQPLLEAKHIPKELNYL--KKIPKKAREKKGNLVPRFVPEFCGL--IPIKASLWWQIMCM 943
Query: 990 PSIMHRLE--NLLVAIELKHLLSA--------SFPEGAEVSAEML--------------- 1024
PSI HRL NL+ +K +++ F + E+L
Sbjct: 944 PSIFHRLNSFNLMHEFIVKTKITSPAIKNEVLDFSWTKKFIYELLGSSENTVPRFLDRKK 1003
Query: 1025 ---------LKALTTEKCQE--RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
L A T ++ E F+LERLE+LGD+FLK+ G LFL ++ EG L++
Sbjct: 1004 QEYIHPFSMLHAFTLKEASEDKEFNLERLELLGDSFLKFVTGEALFLRDESYHEGRLSQS 1063
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD--- 1130
R V N L +LA + L+ I + +P + ++ + +E+ R++ +D
Sbjct: 1064 RGKRVCNKTLFRLACQKGLEGKIAAKVLNPKKNGSIPGFRIKPEFEESLRSLEVPHDFWH 1123
Query: 1131 ---------------------GRAPDDLNAEVRCSKGHHW----LHKKTIADVVEALVGA 1165
A D AE + S + W + K+IAD VEA++GA
Sbjct: 1124 QVPNTVKDVGDLKEAVFALMSDDASKDEKAEKKGSCYNPWTEHEVSDKSIADCVEAIIGA 1183
Query: 1166 FIDDSGFKAATAFLKWIGIQV-----------EFEASQVTNICISSKSFLPLSASLDMAT 1214
++ G +AA AFL W+G+ V ++V C + A LD
Sbjct: 1184 YLRVCGNEAAAAFLHWLGVGVFRDNSLLMEPKTVRTARVRKECAQDLTIFYKKAVLD--R 1241
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
LE +G+ F R ++QA H S+ N++ CYQRLEFLGDAVLDYL+T +++ +
Sbjct: 1242 LEKKIGYTFRDRSFIVQAVTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYS 1301
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK-- 1330
PGQL+DLRS V N A ++ L+ + L +I+ ++ + E+
Sbjct: 1302 PGQLSDLRSYFVKNDTLGRAAAKGKLHQHLLHINPKLEASIDKFLSILHQDPLGEELNTE 1361
Query: 1331 ------EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFS--NLQLNP 1382
E PK LGD+VE+ +GA+ LDS +L W+++ L+ +L S +QLNP
Sbjct: 1362 DDVQDCEDVEIPKALGDMVEAIIGAVYLDSNRSLKVAWQVIERILEDLLNTSIQTIQLNP 1421
Query: 1383 IRELLE 1388
IR+LLE
Sbjct: 1422 IRQLLE 1427
>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731
SS1]
Length = 1596
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 197/687 (28%), Positives = 317/687 (46%), Gaps = 90/687 (13%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAP 113
KQI R+YQ E+ +A + N+I + TG GKT IA+ LI + +R P + + +F+ P
Sbjct: 12 KQIPRQYQTEIFTQAQQNNVIAVMDTGTGKTLIAITLIKWMTTRLRAPGEARKVVVFIVP 71
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV+QQ + I + + R + G W KE D+ +VLVM P++L L H
Sbjct: 72 KVPLVEQQREAIAQQTSLEARGYYGALDVDYWKREQWAKEFDEADVLVMTPRVLYDLLSH 131
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGAS 231
++ I+LLIFDE HH + N+ Y +IM+D Y K D + P++FGMTASP+
Sbjct: 132 AHWSVDRISLLIFDEAHHC--RKNNDYNQIMRDHYHKCDPARRPKVFGMTASPIWN---- 185
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
N S+ LE ++++V +V D D ++++ P + Y +
Sbjct: 186 -VKNPADSLKELERNMNSRVLAVRDNID----------ELHKHAPKPKEIEVIYDSTPTS 234
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGA-LHASYILLSG 350
I+ + + + L + R + +E++G+ GA + S ++
Sbjct: 235 WLAYPYPTMINP----IMNAERLVVRDSESKRFRTRYEATMESVGIIGAEYYLSAVVPRA 290
Query: 351 DETM----RNELIEAEG-NTIDDSLCRFASQASEVFAAICRRDGIASDL---------SC 396
E++ R EL ++DD A +++ I +GI + L
Sbjct: 291 IESLVLNKRRELSTLRKLLSVDDP----APGIAKINGQIEELEGIKALLVQQSAHFFAQS 346
Query: 397 IEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-R 454
+EV E + + +++RL IL + +CI+F + LS+IL+++ +L + R
Sbjct: 347 LEVRPE-WLAPRVIRLAEILQQCYTADPACQCIIFAEQRQVVMVLSWILRHISYLRTMIR 405
Query: 455 CHFLVGVNAG----------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+ G ++ MS + + FR G+ NLLVAT V EEGLD Q C
Sbjct: 406 PTFITGHGGSTHRSMRDLEDVQGMSVKEQQVAVRHFRDGKANLLVATSVAEEGLDFQPCN 465
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR 564
LVIRFD +T+ S+ QSRGRAR S Y + S E D F + E ++ R
Sbjct: 466 LVIRFDALKTMVSYAQSRGRARQKASTYIIMRRSVPT-EADKYTQFMRAEPQLKEAYQKR 524
Query: 565 TSSDA---------FTCSEERIYKV--DSSGACISAGYGVSLLHRYCSKLPHD------- 606
D + S+ R+ +V S+GA ++ G ++L+ R C+ LP +
Sbjct: 525 AIQDGEIDDDAGEDVSESDLRLREVYTTSTGAKLTYGNAIALISRLCAVLPIEPGLPVLK 584
Query: 607 ------EFFNPKPKFYYFDDLG-GTICHIILPANAPIHQ----IVGTPQSSMEAAKKDAC 655
+ +P P Y LG G +ILP+ P+ + G + + AK+
Sbjct: 585 PMYGLIDGASPSPDPAY--PLGFGFSNTLILPSALPLPRDQLHRQGPYRQNKREAKRAVA 642
Query: 656 LKAIEDLHKLGALNDYLLP-QEDNATE 681
A LH+LG +DYLLP QE+N E
Sbjct: 643 FDAARSLHQLGCFDDYLLPLQENNDRE 669
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 212/474 (44%), Gaps = 71/474 (14%)
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSL 988
P +P++ P+ RK DSES EY +P +K + ++ +
Sbjct: 906 PDEPMVVLLPV-------RKRKSADSES----EYL--IPSSF--IKSVSLEDELFRVVET 950
Query: 989 LPSIMHRLENLLVA---IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
PS++ ++ ++ A I L L P AE AL +++ +RLE L
Sbjct: 951 FPSLLRQITAVVRARAVINLLKLPPYPVPRFAE--------ALVIPGVVPKYNYDRLEFL 1002
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY-IRDQPFDPC 1104
GD FLK A H+F + EG+L+ + +V N+ L A R + Y + D+ P
Sbjct: 1003 GDTFLKLATSIHIFNKYPHRHEGQLSVLKDGSVRNTYLRGKAYRLGIYHYNVTDKVCGP- 1061
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
R P + T H+ DG P +R + ++D VE+L+G
Sbjct: 1062 -----KRWMPPV-------TTHTTLDGVIPYVKQTSLR----------RCLSDCVESLLG 1099
Query: 1165 AFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGH 1221
A G IG+ +E + + T S AS + L+ LG+
Sbjct: 1100 AGYLCGGLDGLLRTGTAIGLCFGGMEPWSHRYTGDSPSC------GASTSLRLLQDTLGY 1153
Query: 1222 QFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
+F + LLL+A HP+F + YQRLEFLGDAV+D I YL+ +P +LT ++
Sbjct: 1154 EFRNPLLLLEALTHPTFPDSQTPSYQRLEFLGDAVVDVFIVDYLFHKFPACTAHKLTWMK 1213
Query: 1281 SMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE-----GPR 1334
++V N VA+ + YK +++ + L I V ++ P S +E+ E P
Sbjct: 1214 HLIVCNSLLGAVAIRELGLYKHMLYMARRLDLEITLSV-RVLEPLSYQELAEKWWEFDP- 1271
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFS--NLQLNPIREL 1386
PK L D++E+ LGA+L+D+ ++L ++ IL + ++ L+P+ EL
Sbjct: 1272 -PKALNDVLEAVLGAVLVDTNYDLQLCRPVLERLFKDILPLAHPDVPLHPVMEL 1324
>gi|119487463|ref|XP_001262524.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
gi|158705692|sp|A1D9Z6.1|DCL2_NEOFI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119410681|gb|EAW20627.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
Length = 1388
Score = 226 bits (575), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 313/677 (46%), Gaps = 105/677 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQLE+ + +M+ENIIV + TG GKTHIAVL I A L P + FLAPTVAL
Sbjct: 17 RNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK--AELDICPPDKLVWFLAPTVALCI 74
Query: 120 QQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ +VI ++ + RT G K W+ ++ Y V+V +L L H F+K
Sbjct: 75 QQHEVIASNLPAVRTRTLTGLDKVELWTEQSIWDAVLNGYRVIVSTHAVLADALSHGFVK 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGAS 231
M +ALLIFDE HH + H KIM+DFY P + K VPRI G+TASPVV
Sbjct: 135 MSRLALLIFDEAHHCTRR--HAANKIMRDFYHPTLTKSGPGAVPRIMGLTASPVVRSNH- 191
Query: 232 AQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ + ++E+ LDA + ++L F P ++ Y P + + + S+
Sbjct: 192 ------QELLTVESNLDAVCRTPRVHRQELVKFTHRPHLQQIWYTPT---DPAGFKSASQ 242
Query: 291 QLA---------EIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLE 333
L +I + YI L + D +L+ +QL R D + E
Sbjct: 243 TLGALYHAWETLDIGDDPYIQRLRKSPLDDTALKKALLTGKTYCREQLRRFVDRSRHIFE 302
Query: 334 NLGVCGALHASYILLS--GDET----MRNELIEAEGNTIDDSLCRFASQASEVFAAICRR 387
LG A + Y + GD M + EAE + D L + ASE+ A+
Sbjct: 303 ELGEWAAEYYIYASIKQLGDRVRNSYMSGDWDEAEKAYLVDFLSKIP--ASEIQLAL--- 357
Query: 388 DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-N 446
+D + S K L+ L + ++ ++FV + T A++ +L +
Sbjct: 358 ----NDPGSFRI------SPKFESLLNFLDSLD-EREFSGLIFVKQRATVSAMTSLLSVH 406
Query: 447 LKFLASWRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+RC VG + G S ++ + L+ FRSG NL++AT V EEG+D
Sbjct: 407 PCTRERFRCAAYVGWSNGSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGID 466
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL---------VDSGNQRELDLIKNF 550
I C +V+ +D P + SF+Q RGRAR QS +A + V E +I+ +
Sbjct: 467 ISACSVVVCYDKPPNLKSFVQRRGRARRKQSTFAIMFPTDDASADVSKWQDLEQAMIEAY 526
Query: 551 SKEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+E + ++ E+M+R + V+S+ A ++A ++ LH +C+
Sbjct: 527 QDDERQLQSVSALESLDEEVMERLT-------------VESTSAVLTADMAMAHLHHFCA 573
Query: 602 KLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQSSME-AAKKDACLK 657
LP + + +P F + + G + +ILP+ + + + G E AA K+ +
Sbjct: 574 VLPPQPYADMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQ 633
Query: 658 AIEDLHKLGALNDYLLP 674
A + L++ G +ND+LLP
Sbjct: 634 AYKALYEFGLVNDHLLP 650
Score = 116 bits (291), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 200/473 (42%), Gaps = 83/473 (17%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD------LPPELCQLKIIGFSKDIGSSLS 987
L P RNLLH ++L +S+ EE + + + C + + F+ I
Sbjct: 847 LECAPFPHRRNLLHRQRLANSQVDVDEETPESAAKNPIVAADACTIDRLPFTMAIFGLF- 905
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+ +I+ RLE L+A L+ + + S + ++ A++T + +R E LGD
Sbjct: 906 -ISAIVERLETELIATRLRETI---LRDVGFKSTDHIITAISTPFAHALTNYQRYEFLGD 961
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK++V LF H EG L+ R+ V N L K A L YI +
Sbjct: 962 SILKFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAYIVTK-------- 1013
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
RI S++ + S+ R P + K +ADVVEAL+GA
Sbjct: 1014 -------RIASRKWSAPLISEKLERVP-----------AKRQMSTKVLADVVEALIGAAY 1055
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM-ATLEILLGHQFLHR 1226
D G A A ++ + ++ A + +++S P SA M L+ +G+ F
Sbjct: 1056 MDGGHATAQACIRRLLPEINLHA---VDTRTATRSVAPESARHMMNERLKDHIGYTFEDE 1112
Query: 1227 GLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP-GQLTDLRSML 1283
LL++A HPS ++ YQRLE+LGDAVLD +I S +++ +P +P G +T ++ +
Sbjct: 1113 SLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFN-HPIQRPQGDMTKIKHAV 1171
Query: 1284 VNNQAFANVAVDQS--------------------------FYKFLIFDSNVLSETINNYV 1317
VN A + ++ + ++F+ + L+ + +
Sbjct: 1172 VNANLLAFLCMESATSEEKLDVAQTSKDSFAVTTSQESVELWRFMRYRGQNLNAARDASL 1231
Query: 1318 --DYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+ + P P K D+VES LGAI +DSG +L
Sbjct: 1232 ARHRALRDEIASSLLHAPHYPWHALSRLNADKFFSDIVESVLGAIFVDSGGDL 1284
>gi|156044530|ref|XP_001588821.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980]
gi|154694757|gb|EDN94495.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1515
Score = 225 bits (574), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 214/731 (29%), Positives = 342/731 (46%), Gaps = 109/731 (14%)
Query: 3 DGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKY 62
D + VEG KI ++ +VE+ + + E ++ ++ K+ R Y
Sbjct: 54 DDQHEVEGYLDGLTSGKI---SNEIVEDLCSSTTESAIENEDAISEEEKGKNVTVTPRTY 110
Query: 63 QLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQA 122
QLE+ +++++ NIIV + TG GKTH+AVL I LA L R + FLAPTVAL Q
Sbjct: 111 QLEMLEESLKGNIIVAMDTGSGKTHVAVLRI--LAELERMEPDKLIWFLAPTVALCTQHN 168
Query: 123 KVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
+ ++ S+ K+ G R W+ + ++ V Q+LL L H F++ME
Sbjct: 169 EYLQLNISSVLVKLLVGSDGVDRWTEQRQWDAILKDVKIAVSPYQVLLDALAHGFVRMER 228
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKP--DIMKVPRIFGMTASPVVGKGASAQANLP 237
++L+IFDE H+ K+ P AKIM FY P I +P I G++ASPV+ P
Sbjct: 229 LSLIIFDEAHNCLNKA--PGAKIMTSFYHPYKSISPLPHILGLSASPVIRSD-------P 279
Query: 238 KSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYGP----VINDTSSSYVTCSEQ 291
+S++ +E LDA + + A DL V P++ + +Y P ++ T +S +
Sbjct: 280 QSLSKIEETLDAVCRTPKIHQA-DLRLRVKLPILSIIEYNPEPEYLMTKTVASLGKVIQD 338
Query: 292 LAEIKREQYISAL------------SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
L I + Y+ AL ++ L+++++ N+ ++L ++++ K L LG
Sbjct: 339 L-NISEDPYVLALKSSGSEKSQRELAKLLNNYKT--NSQRELRLIYNTGKTILVELGSWA 395
Query: 340 A-LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFA----AICRRDGIASDL 394
A + S ++ +TM+ A EVF A R IA L
Sbjct: 396 ADYYISAVVTKYLKTMK---------------------AREVFVVMDLAATERLYIAKAL 434
Query: 395 SCIEVLKEPF-----FSKKLLRLIGILSTFRLQQH--MKCIVFVNRIVTARALSYILQNL 447
+ + F S K+ +L+ I+ LQQ I+FV T L+ +L
Sbjct: 435 KQVGISPSVFSLADKTSDKVAKLLNII----LQQEPPFSAIIFVEERATVFVLADLLSQH 490
Query: 448 KFLASWRCHFLVGVNAGLKSMSR-----------NAMKSILEKFRSGELNLLVATKVGEE 496
+ F +G G S S+ + K L +F+ G++++L+AT V EE
Sbjct: 491 PLT---KERFKIGTMVGSSSNSKRTQIVGELVDLDKQKDTLSRFKLGKIDILIATNVLEE 547
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD---LIKNFSKE 553
G+D++ C LVI F P + SFIQ RGRAR S+ L+D + +D L +N K
Sbjct: 548 GIDVRACNLVICFSKPSNLKSFIQRRGRARQQDSKL-ILLDPLGGKVIDWHELERNMRKM 606
Query: 554 EDRMNREIMDRTSSDAFTCSEE----RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
+ RE+ + S+ T E+ R+ +V+S+GA + V L+ +CS L +F
Sbjct: 607 YENEMREL--QHISEIETADEQSEDGRVLRVESTGAQLDLDNAVPHLYHFCSVLTAKDFV 664
Query: 610 NPKPKFYYFDDLGGTICH--IILPANAP----IHQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ +P F Y DLG +I P + P +H+ G S AA KDA +A L+
Sbjct: 665 DLRPDFVYSFDLGTDFVRAKVIFPLSVPETLRVHESRGVWLSEKGAA-KDAAFEAYVALY 723
Query: 664 KLGALNDYLLP 674
K G +ND LLP
Sbjct: 724 KGGLVNDNLLP 734
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 194/463 (41%), Gaps = 72/463 (15%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
P L P+ R + LH K+E+ +++ LP +C + F + ++PS
Sbjct: 934 PYLALIPVTRRTDFLH--KVENQSPSSSKQFSCVLPASVCVQDAMPFQ--LVQFGMMIPS 989
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEILGDAFL 1050
I H +E L+ L + + E+S L++ A+T + +RLE LGD+ L
Sbjct: 990 ITHHIEVQLIV----DRLCKTILKDLEISDRGLVQTAITHASYSLTSNYQRLEFLGDSIL 1045
Query: 1051 KYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG 1110
K L + EG L+ + V+NS + A L YI + F ++ +
Sbjct: 1046 KLCTSVQLISEYPLWPEGYLSAMKDRIVSNSRSSRAAVELGLDEYIITKKFTGSKWRPMY 1105
Query: 1111 RRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDS 1170
+++ R + S K ++DVVEAL+GA + D
Sbjct: 1106 VEDYLKTTEQKSRQMSS-------------------------KVLSDVVEALIGACMVDG 1140
Query: 1171 GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
G A L+ ++ + + + + + L + + +E +L + F + LL+
Sbjct: 1141 GIPKALKSLQLFFPELNWLPLETRQMSLYQLAADDLHLPIALQPIEQILAYTFTKKSLLV 1200
Query: 1231 QAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
+A HPS+ +RLEFLGDA+LD +I + ++S +L Q+ LRS LVN A
Sbjct: 1201 EAMTHPSYINGTQSLERLEFLGDAILDNIIVTAMWSYETELSHFQMHLLRSALVNADFLA 1260
Query: 1291 NVAVDQSFYKFLIFDSNVLSETIN--------NYVDYMITPSST---------------R 1327
+ ++ S +++ + I+ + V+++ S+T R
Sbjct: 1261 FLCMEMSIEQYVTDLTEGKDHQIHETHTRRRFSLVNFLRHSSATFSIYQKQALARHQELR 1320
Query: 1328 E-----VKEGPRCP----------KVLGDLVESSLGAILLDSG 1355
E +K G + P K D++ES LGAI +DSG
Sbjct: 1321 EEILAVIKTGDKFPWTLLSRLDARKFFSDMIESLLGAIWIDSG 1363
>gi|391348710|ref|XP_003748587.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1732
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 209/695 (30%), Positives = 313/695 (45%), Gaps = 91/695 (13%)
Query: 35 VSGVGFGAESSVGAQKTDKDPKQI----ARKYQLELCKKAMEENIIVYLGTGCGKTHIAV 90
+ +G + V + +KD Q+ AR YQ+EL + A + N IV LGTG GKT I+V
Sbjct: 87 IPSMGSSIRNDVAMARIEKDSLQLIEEQARSYQVELFEYAKKHNTIVCLGTGTGKTFISV 146
Query: 91 LLIYELAHLI---------RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG--G 139
LLI L H + R P IFLAP V LV+QQ+ V+ + KV T+ G
Sbjct: 147 LLIKYLEHQVTGPWLDESGRTPVGKRTIFLAPNVPLVEQQSAVLACHMTVKVGTYVGSMN 206
Query: 140 SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPY 199
+ R S W KE+ ++ VLVM P++ + H FI +E I LL+ DECH A PY
Sbjct: 207 TDRWTSE-HWNKELQEHGVLVMTPEVCRIAVDHGFIPLENINLLVLDECHRAT--GVDPY 263
Query: 200 AKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINS-------LENLLDAKVY 252
KIM+++ + PRI G+TAS V A +P SI S L ++L A+
Sbjct: 264 VKIMENYKNLNANDRPRILGLTASVV-------NAQVPISIRSCDATSAHLIDILGARFP 316
Query: 253 SVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS------EQLAEIKREQYISALSR 306
S E DLE+ + S R + V T + S E++ I E+ AL +
Sbjct: 317 SREKVRDLEACLFS-TARTASHNVVRFGTKPVEIIVSHEDHDAEKVLPIDEEKV--ALLK 373
Query: 307 KLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTI 366
D R K L + + S CGA A +L R ++ N
Sbjct: 374 DCADFAEFRKMIKNLAKTYVS----------CGAFCAKQLL-----EFRERELDKALNLP 418
Query: 367 D--DSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQH 424
D + A +++ A+ D S +V K+ L+ I+ F +
Sbjct: 419 DCAEGFRDHAHVKRDIYKAL--NDFFGPKPSIHDV------PPKMKTLLQIIKQFE-GKT 469
Query: 425 MKCIVFVNRIVTARALSYILQNLKF---LASWRCHFLVGVNAGL-------KSMSRN--A 472
+ +VFV + A L + +L + C F+VG N G +SM N A
Sbjct: 470 LSAVVFVQERLVAYVLYIWMTHLSREDEFSFVNCSFIVGQNQGAYGRDVDQESMKMNAKA 529
Query: 473 MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
K ++ FR G NL+ AT V EEG+D+ C L++RFD P V S+ QS+GRAR S Y
Sbjct: 530 QKKVMRDFRGGIYNLMFATSVIEEGMDVPACNLIVRFDPPMDVRSYTQSKGRARAKPSLY 589
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRM-----NREIMDRTSSDAFTCSEER----IYKVDSS 583
L + + + +E +++ E T+S + +E Y V+ +
Sbjct: 590 VLLSSESELAKTKALLDSYQETEQLVMHCCGIERSPPTASQSLEFLKEDPDLPPYVVEHA 649
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGT- 642
A I+A +S++H YC + ++ N P F + + GG IC + +P P+ + V
Sbjct: 650 RARITAQSAISVIHSYCQQFMRMKYPNVFPFFDFEETAGGYICTLTMPIVCPLREKVSNA 709
Query: 643 --PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
P S + AK L+ + LH G L+D LLP+
Sbjct: 710 TRPFESKDKAKMFVALEMCKRLHACGELSDNLLPR 744
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 191/442 (43%), Gaps = 80/442 (18%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
++KALTT+ QE F LERLE+LGD+FL+ + + + EL R VNN +L
Sbjct: 1198 IMKALTTKASQEVFDLERLELLGDSFLQIVATFSVLDRNPNMSISELNVLRQYEVNNRHL 1257
Query: 1084 LKLAARNNLQVYIRDQPFDPCQ-FFALGRR--------------CPRI-CSKETE----- 1122
L A L + PF F LG R C + C E
Sbjct: 1258 LCRAHDKKLTSVLEAYPFKATHNFLPLGCRPIPHEEKLLRRDILCLLVQCFDYDEDLTPK 1317
Query: 1123 ----------RTIHSQYDGRAPDDLNAEVRCS---------------KGHHWLHKKTIAD 1157
R + ++ P +L + + + H K D
Sbjct: 1318 LKNLRHCKFIRRLLEKFAREQPSNLQEMAKYAFLQDDQLPLRHDVPVRSFHDFKAKVGGD 1377
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGI--------------QVEFEASQ-VTNICISSKS 1202
VVEAL G +++ G A F +WIG+ +++F A+Q + C+ S
Sbjct: 1378 VVEALAGTYLEQCGPIGALRFFRWIGMDLGDTESNNFLDAFKLDFSAAQNIPAECLKSYQ 1437
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLI 1260
+L + +E + F +GL+LQA H S + L Y RL F+G+AV DYL+
Sbjct: 1438 YL-------IEKVEKQIDFTFKSKGLVLQAITHHSCRDHLLTEDYNRLAFIGEAVADYLL 1490
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
T Y+Y + L PGQL+DLRS L+NNQ A V + L++ ++ L I Y++ +
Sbjct: 1491 TLYIYGLSSNLDPGQLSDLRSALINNQVTAYAVVRAELHTVLLYTNSKLFSAIRKYLENI 1550
Query: 1321 ---------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP 1371
+ + E P+ L +++S LGA+ +DSG + +VW+I++ +
Sbjct: 1551 DDIGLRLNTVLGDWETDDAEEAEVPRPLARILQSILGAVFIDSGKSFESVWRILVRIMGH 1610
Query: 1372 ILKFSNLQLNPIRELLELCNSY 1393
+ + + PI ELC +
Sbjct: 1611 EIALFSRNV-PIPPTTELCKKF 1631
>gi|308485595|ref|XP_003104996.1| CRE-DCR-1 protein [Caenorhabditis remanei]
gi|308257317|gb|EFP01270.1| CRE-DCR-1 protein [Caenorhabditis remanei]
Length = 1941
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 283/1120 (25%), Positives = 474/1120 (42%), Gaps = 216/1120 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA ++N IV LGTG GKT IAVLL+ E + P F+ V
Sbjct: 14 RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPYGQGGKRAFFIVEKVN 73
Query: 117 LVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV+QQAK IE FKV G ++ KS ++ + Q V+V+ Q LL + H +
Sbjct: 74 LVEQQAKHIEVHTSFKVGQIHGMTSTELWKSPESCDEFMRQNHVVVITAQCLLDLINHAY 133
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVGKGASA 232
+K++ +LIFDECHHA + S HPY IM + K VPR+ G+TAS + K A
Sbjct: 134 VKLQDTCVLIFDECHHA-LGSKHPYRLIMIKYKELKKAGHPVPRVLGLTASLI--KEKVA 190
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC---- 288
L + +N LE++LD+ + + D L + + P + V C
Sbjct: 191 PEKLTEQLNKLESVLDSVIETASDLVTLSKYGAKPF--------------EALVLCRDFE 236
Query: 289 SEQLAEIKREQYISAL--SRKLHDHQSLRNTTKQLN---RLHDSMKFCLENLGVCGALHA 343
+E L E ++ L + K +H ++ + L+ + DS+K L G A
Sbjct: 237 TENLPLPHYETIMALLLDTEKFVNHTTVFHPDLDLDPRRSIRDSLKTTKAVLRQLGPW-A 295
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK-- 401
++ + + E ++L +++ + D F + A + R + ++ ++ L
Sbjct: 296 AWKIAAMWEKELSKLTKSQ--ILPDKALLFLNLAKTSMTTVKRL--LEPEMRKVKSLADL 351
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMK-----------CIVFVNRIVTARALSYILQNLKFL 450
E F ++ +RL L F + MK IVFV++ A AL +++N++
Sbjct: 352 EKFVPQRFVRLFESLEMFEPEFQMKRMNREVPEKLSAIVFVDQRYIAYALYVMIRNVR-- 409
Query: 451 ASWRCHF-------LVGV---------NAGLKSMSRNAMKSILEKFRSGELNLLVATKVG 494
W F +VG N GL A++ +F E+N+L+AT V
Sbjct: 410 -QWETKFKFVQSDYVVGASGQNLANSDNQGLHKRQTEALR----RFHKNEINVLIATSVL 464
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKE 553
EEG+D++ C LVI+FD P + S++QS+GRAR S Y +VD + D +K+F +
Sbjct: 465 EEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARKMGSRYVVMVDHKDVPSCDSDLKDFQQI 524
Query: 554 EDRM---NREIMDRTSSDAFTCSEERI------YKVDSSGACISAGYGVSLLHRYCSKLP 604
E + +R + + T D+ + + + Y V+S+GA + ++L++RYCSKLP
Sbjct: 525 EKILLSRHRTVNNPTEDDSIDFNLDDVDHLMPPYVVESTGAELKLSNAIALVNRYCSKLP 584
Query: 605 HDEFFN--PKPKFYYFDDLGGT--ICHIILPANAPIHQ--IVGTPQSSMEAAKKDACLKA 658
D F P + +D G T ++LP N+PI I+ P + +AA+ L+A
Sbjct: 585 SDIFTRLVPHSRIIPVEDRGVTKYCAELLLPINSPIKHAIILKDPMPNKKAAQMAVALEA 644
Query: 659 IEDLHKLGALNDYLLPQEDNA-------TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAV 711
LH G L+D LLP+ + +DEP ++ G R +L++ +
Sbjct: 645 CRQLHLKGELDDNLLPKGRESIAKLLEHIDDEPDEYAPGMALKVGSSKRKQLYDKKIARA 704
Query: 712 LRQSWTKSQ-----YPVRLN-FYFMQFIPDPADRIYRE-------FGLFVKSLLPG---- 754
L +S + + Y + L F I +P R++++ FG +P
Sbjct: 705 LNESRVEPEKECYIYALELERFREPDSILNPKGRVFQDPIEYDYCFGFLSTKDIPKIPPF 764
Query: 755 ----EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILD------------RS 798
++ V L A ++ +T+ + + Q F +L +
Sbjct: 765 PIFLRQGNMTVRLTSAPKKTSVTE---RQLEEIQHFHNYIFTQVLQMCKNGLEFDVSATA 821
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSS--PVFGTPGGSVDR 856
N+ VPL K C+ T+ S++ K + +++ + P V R
Sbjct: 822 PLNTLIVPLNK---CKDDEGTY-----------SINMKYVTEVVANMENMPRVPTDDVRR 867
Query: 857 KSLPSHGPLQLHNGWSSESDVEN---SLVYATHKK----WFYLVTNIVFEKNGYSPYKDS 909
K + D EN ++V ++ FY V I+ + N S + D+
Sbjct: 868 K---------------YKFDAENYKDAIVMPWYRNVEQPAFYYVAEILTQFNPSSQFPDT 912
Query: 910 DSSSHVDHLISSYGIHLKHPKQPLL------RAKPLFRLRNLLHNRKLEDSESHELEEYF 963
+ + ++ I Y + + Q LL L R H R+ + +
Sbjct: 913 NFETFNEYFIKKYNLEIYDQNQALLDVDFTSNRLNLLLPRLQPHQRRQRRDSTSSVTSVT 972
Query: 964 DD-----------------------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
D L PEL + I S + + ++ LPSI +RL LL
Sbjct: 973 DRASESKSSESVTSSSGAHSTQRQILVPELMDIHPI--SATLWNVIAALPSIFYRLNQLL 1030
Query: 1001 VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLE 1040
++ EL+ ++ L KA + E + + SLE
Sbjct: 1031 LSDELREII--------------LQKAFSREDTKLKASLE 1056
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 202/454 (44%), Gaps = 81/454 (17%)
Query: 1016 GAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
G VS +LL ALTT + SLER E +GD+FLK+A +L+ EG+L+ RS
Sbjct: 1420 GMGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARS 1479
Query: 1076 NAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETER 1123
V+N NL +L + + I FD C F A KE ER
Sbjct: 1480 KEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNNSDAEEKDKEIER 1539
Query: 1124 TIHSQYDGRAPDD-----------------------------LNAEVRCSK----GHHWL 1150
++ Q P+D LN ++ +
Sbjct: 1540 ILNGQTIEEKPEDKTGWDIGGDTAKSTADGIETINFPKQSRLLNEDISPLPYNLLTQQNI 1599
Query: 1151 HKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASL 1210
K+IAD +EAL+G + G + W+G++V + T + F+ A+
Sbjct: 1600 SDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKV-IQKDAKTEVAHPLLRFIDTPANP 1658
Query: 1211 D--------------MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDA 1254
D A LE +G++F R L+QAF H S+ NR+ GCYQRLEFLGDA
Sbjct: 1659 DASLKALNNLWQQYQFANLEERIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDA 1718
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
VLDY+IT YL+ + PG LTDLRS LVNN FA++AV F K I L I
Sbjct: 1719 VLDYMITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIE 1778
Query: 1315 NYVD---------------YMITPSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGFN 1357
+V YM+T + PK LGD+ ES GAI LDSG N
Sbjct: 1779 KFVKLCADRNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRN 1838
Query: 1358 LNTVWKIMLSFLDPILKF--SNLQLNPIRELLEL 1389
L+T W+++ + + +N +PIREL+EL
Sbjct: 1839 LDTTWQVLFHMMRSTIDSCCANPPRSPIRELMEL 1872
>gi|302318908|ref|NP_001180543.1| dicer-2 [Bombyx mori]
gi|300669733|dbj|BAJ11655.1| DICER-2 [Bombyx mori]
Length = 1677
Score = 224 bits (570), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 203/682 (29%), Positives = 337/682 (49%), Gaps = 82/682 (12%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLA 112
+Q AR YQ L + A +N I++L TG GKT IA LI + + ++KP FL
Sbjct: 11 EQKARPYQAILEEIASSKNTIIHLPTGSGKTFIAQRLIKKFRNQLKKPWGEGGKRSFFLV 70
Query: 113 PTVALVQQQAKVIEESI---GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
TV LV QQ VIE G + G K DW+ E+ + +V+VM QIL
Sbjct: 71 NTVPLVNQQKNVIEMMCPVDGVGAYSSEDGVDYWKK-ADWDSELARNQVIVMTSQILSDM 129
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H +I++E I L+IFDECHHA +HP IMK F + PR+ G+TA+ + G
Sbjct: 130 LTHAYIRIEDINLIIFDECHHAV--EDHPMRVIMKHFLNCKAHEQPRVLGLTAT--LLNG 185
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRV-YQYGPVINDTSSSYVTC 288
+ + + +++ LEN A + +V+D ++ ++ ++P + Y P +++ + ++
Sbjct: 186 NVSISKIEETLKQLENTFHATIATVDDLGEVMTYSTNPQEFIQYFRKPQMSEAAKEAISL 245
Query: 289 SEQLAEI--KREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFC-------LENLGVCG 339
L + + +S S+ R+ + N++ ++K LE +G+ G
Sbjct: 246 LNTLQNLVMSVKLPVSLPSKDFKKTPCQRDISNDPNKIVKAVKNLIVGMITNLEEMGLYG 305
Query: 340 ALHA--SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
+YI+L E ++ + E N + ++ +++A + D + ++
Sbjct: 306 GSLGILAYIVLL--ERLKRKASTKEENLLYSTVITHSTEARMILL-----DAMENETGYD 358
Query: 398 EVLKEPFFSKKLLRLIGILSTFR---------------LQQHMKCIVFVNRIVTARALSY 442
+++K S+K+L+LI +L + ++ + I+F + T++ L
Sbjct: 359 KIIKHS--SEKILQLIDLLKEYNPLILEKPGELLKVNHSRKPLCGIIFTKQRFTSKILYN 416
Query: 443 ILQNLK--------FLASWRCHFLVGVNAG-LKS------MSRNAMKSILEKFRSGELNL 487
IL +LK FL + F+VG + KS + +++ K+IL F +G+LN
Sbjct: 417 ILMDLKKARPDEFEFL---KHDFVVGFSINPFKSTREEHYLKKSSQKAIL-GFNNGDLNC 472
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLI 547
L++T V EEGLDI C LV+R+D P S+IQS+GRAR ++ + LVD +++ LI
Sbjct: 473 LISTSVIEEGLDIPQCALVVRYDAPTEYRSYIQSKGRARSSEASFVILVDIEDKQSF-LI 531
Query: 548 K--NFSKEEDRMNREIMDRTSSDAFTCSE--ERIYKVD-------SSGACISAGYGVSLL 596
K F K E+R+ I+ S A T + E +Y D S+G + + +SLL
Sbjct: 532 KYDAFQKTEERIRNLIVGDDSRAAPTTQDIHENLYDDDEVPPYETSNGNILYSVSAISLL 591
Query: 597 HRYCSKLPHDEFFNPKPKFY--YFDDLGGTICHIILPANAPI-HQIVGTPQSSMEAAKKD 653
RYCS LPHD+F P + ++ +ILP +P+ +I G P S+ + AK+
Sbjct: 592 SRYCSILPHDQFTTITPVWLQEVVENGAKKQVTVILPIGSPVKEEIKGDPYSNTKTAKRS 651
Query: 654 ACLKAIEDLHKLGALNDY-LLP 674
A LKA LH+LG L+ LLP
Sbjct: 652 AALKACIKLHELGELHPLTLLP 673
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 201/441 (45%), Gaps = 62/441 (14%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
P G +L ALTT + F LER E LGD+FLK+A +L ++EG+LT
Sbjct: 1181 PTGRGPELRDVLAALTTINSNDTFDLERPETLGDSFLKFAASLYLHHKFPNMNEGQLTNI 1240
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDP-CQFFALGRRCP------------------ 1114
+ ++N NL A+ NL ++ + F P F G P
Sbjct: 1241 KGKLISNRNLYYAGAKFNLGGRMKVEQFSPRSDFLVPGFFAPPKLEEFIEQRQIRPTFLI 1300
Query: 1115 ------------RICSKETERTIHSQYDGRAPDDLNA----EVRCSKGHHWLHKKTIADV 1158
+ + E +++ +G A + ++C + K+IAD
Sbjct: 1301 GIQFTEEEVMTGELSEESWESVMNNFQNGIAEAEPEGCAQNSMQCYVHSQAVADKSIADS 1360
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM--- 1212
VEAL+G ++ G AA L+W+ + Q F + L A +D
Sbjct: 1361 VEALIGTYLLSGGILAAVKLLEWMEVFPPQDNFADMLHKPVQTPLSKNLATEADIDFLLN 1420
Query: 1213 ---ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
+E +L + F LL A H S+ NRL Y+RLEFLGDA++D+L+TS+++
Sbjct: 1421 NSRTDVEKILNYTFKDSTFLLNALSHSSYIRNRLTSSYERLEFLGDAIIDFLVTSHIFEN 1480
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN-VLSETINNYVDYMITPSST 1326
+LKPG++TDLRS LVNN FA V +K+L + N L + I +V++ I +
Sbjct: 1481 CRELKPGEMTDLRSALVNNVTFAAYTVKLGLHKYLCSELNPSLEKAIMKFVEHQIERNHE 1540
Query: 1327 RE-------------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD-PI 1372
E V E PKVL D+ E+ +GA+ LDSG NL TVW ++ + I
Sbjct: 1541 IEFDVLLLISEVDCQVAEYVDVPKVLSDIFEALVGAVYLDSGGNLETVWSVLYKIMHVEI 1600
Query: 1373 LKFSN-LQLNPIRELLELCNS 1392
FS + P++ L E+ ++
Sbjct: 1601 DSFSKRIPKQPVKILYEMIHA 1621
>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1588
Score = 223 bits (569), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 303/651 (46%), Gaps = 77/651 (11%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK--------PQKSIC 108
Q R+YQ+EL +KA ++N IV L TG GKT IA LL L H++ K K I
Sbjct: 167 QTPREYQIELFEKAKKKNTIVVLNTGSGKTLIAGLL---LRHILEKEIEDRAAGKLKRIA 223
Query: 109 IFLAPTVALVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILL 167
FL V+LV QQ V++ ++ V FCG + S W ++ ++ V+V IL
Sbjct: 224 FFLVDKVSLVFQQHAVLDCNLEHPVGRFCGDMVDEMWSREFWAQQFEENMVIVCTAAILQ 283
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPV 225
CL H +I+M I LL+FDE HH K NHPYA+I+KDFY P PRI GMTASPV
Sbjct: 284 KCLTHSYIRMNQINLLVFDEAHH--TKKNHPYARIIKDFYIKVPAKEMRPRILGMTASPV 341
Query: 226 VGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
AQ ++ + LE LL +++ +V + ES S+ R I + Y
Sbjct: 342 -----DAQTDVKIATAQLECLLHSEIATVSE----ESLYSNSTAR------NITEIEVHY 386
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
+ E K Q +SAL ++ K +LG A
Sbjct: 387 SSLPVPY-ETKLYQKVSALV----------GCNPHFSKELSFAKAATSSLGPWAADRFWQ 435
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL--SCIEVLKEP 403
+ L+ + +R D + S E A RD I S L +
Sbjct: 436 LFLTDETILR------LAQRTDMTYSGLKSNDKETAAVQKLRDVIQGHEFNSATPTLDQ- 488
Query: 404 FFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQN----LKFLASWRCHFL 458
S K+LRL L F +CIVFV +TA L+ + + L +L+ L
Sbjct: 489 -LSIKVLRLWEELKLRFTNGPGYRCIVFVEMRLTAVLLADLFKQEGIKLPYLSP---AML 544
Query: 459 VGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VG A GL +MS + KFR E+N L AT+V EEGLDI C LV+RFDL ++V
Sbjct: 545 VGSQAATGLANMSFKQQVLTIHKFRQAEVNCLFATQVAEEGLDIPDCNLVMRFDLYKSVI 604
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR---------EIM--DRT 565
+IQS+GRAR SEY ++ GN R+ ++ + +++ + R +IM D +
Sbjct: 605 QYIQSKGRARRQDSEYLSFIEGGNGRQARVVLQATYDQNVLRRFCNALPEDKKIMGFDIS 664
Query: 566 SSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLP--HDEFFNPKPKFYYFDDLGG 623
SS + Y + S+GA ++ + +L + S L +DE P++ +
Sbjct: 665 SSVLKGDLHYKTYLIKSTGAMLTWTSSLEVLANFASSLRQFNDEVL--APEYVVINQGQN 722
Query: 624 TICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
I + LPA +PI + G P S+M+AA+ A + ++L K ++ L P
Sbjct: 723 FIAEVQLPAKSPIMHMTGFPHSNMKAARCSAAFEMCKELIKKKYIDHNLHP 773
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 194/431 (45%), Gaps = 73/431 (16%)
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL--- 1039
P+++HR++++++A++ LL + + ++ L+A+T E +E+ +
Sbjct: 1076 FPALIHRIDSVMIALDACKLLELN------IRPDLALEAVTKDSDNSDEHDKEKINFQSG 1129
Query: 1040 -----ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
ERLE LGD FLK A +F + +E R + N NL A NL
Sbjct: 1130 MGKNYERLEFLGDCFLKMATTIAIFTENPDSNEFGYHVDRMLLICNQNLFNKAVDRNLPE 1189
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
Y+R + FD ++ G R R KE + H L K+
Sbjct: 1190 YVRSKSFDRRSWYPSGLRLIR--GKEGSVNLR---------------------HALADKS 1226
Query: 1155 IADVVEALVGA----FIDDSGF----KAATAFLKWIGIQVEFEASQVTNICISSKSFL-P 1205
+ADV EAL+GA + D S F +A TA +K + + F P
Sbjct: 1227 VADVCEALIGAAYLTYADSSDFDMAIRAVTAVVKSKNHLMTSWGDYYAAYTPPAWQFADP 1286
Query: 1206 LSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGGC---YQRLEFLGDAVLDYLIT 1261
++A ++ LG++F LL AF HPS+ R YQRLEFLGDA+LD +
Sbjct: 1287 TPMQKELARQIKDKLGYEFKSPALLRSAFKHPSYPRAYENLPDYQRLEFLGDALLDMVCV 1346
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+L+ +P P LT+ ++ +V+NQ A++ V +K ++ L +N D+++
Sbjct: 1347 DFLFHKFPDADPQWLTEHKTAMVSNQFLASLCVKLGLHKHVLSGHASL---LNQTHDFVV 1403
Query: 1322 TPSSTREVKEG------------PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
+ S ++ E PK L D+VE+ +GAI +DSG++ N V + +
Sbjct: 1404 SLESAKKDGEADGTFTQAYWINVQHAPKYLSDVVEAYIGAIFIDSGYDYNHVRVFFDTHI 1463
Query: 1370 DPILKFSNLQL 1380
P F+++ L
Sbjct: 1464 RPF--FTDMAL 1472
>gi|440655799|gb|AGC22548.1| dicer [Ctenopharyngodon idella]
Length = 1881
Score = 223 bits (569), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 279/1098 (25%), Positives = 453/1098 (41%), Gaps = 200/1098 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
RKYQ+EL + A+E N IV L TG GKT IAVLLI EL+H IR + +FL + V
Sbjct: 35 RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGEDRKRTVFLVNAASSVV 94
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
QQA + +V + W +E+ +VLVM I L+ L + + +
Sbjct: 95 QQASTVRTHSDLQVGDYMSEEMTTWPEEIWNREMMGNQVLVMTCHIFLHVLKNGVLPLSK 154
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKS 239
I LL+FDECH A ++HPY +IMK PRI G+TAS + GK +L +
Sbjct: 155 INLLVFDECHLA--ITDHPYQEIMK--ICEGCPGCPRILGLTASILNGK--CDPCDLEEK 208
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQ 299
I +LE +L + + D L+ + S P V G + +D S S++L
Sbjct: 209 IQNLEKILQSNAETATDLVVLDRYASQPREVVLDCG-LYHDQSG----LSDRL------- 256
Query: 300 YISALSRKLH--------DHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
+S L LH H+ R+ T ++ + + L LG A A+ I++
Sbjct: 257 -LSELDEALHFLNDCNLSTHREDRDPTFISKQVLNDCRAVLTVLGPWCADKAAGIMVREL 315
Query: 352 ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLR 411
+ + I+ E ++ F A+C + L LK F + K++R
Sbjct: 316 Q----KYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLD----LK--FVTPKVIR 365
Query: 412 LIGIL---STFRLQQ--------------------------------------------- 423
L+ IL F QQ
Sbjct: 366 LLDILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKPEANFPSPFT 425
Query: 424 HMKC-IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM-- 473
++ C I+FV R TA L+ +++ L +++S +F+ G + G K+ RN
Sbjct: 426 NILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHSIG-KNQPRNKQME 481
Query: 474 ------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR
Sbjct: 482 VEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARA 541
Query: 528 PQSEYAFLVDSGNQRELDL-IKNFSKEEDRMNREIMDRTSSDAFTCSE------------ 574
P S Y L DS + + +K + E +I+ S + C+E
Sbjct: 542 PVSNYIMLADSERTKTFEEDLKTYKAIE-----KILRNKCSKSAECNEFELEPVTDDDNV 596
Query: 575 --ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTICHIILP 631
+ + + G ++ + ++RYC++LP D F + PK + GG + LP
Sbjct: 597 LPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELKTGGYRSTLFLP 656
Query: 632 ANAPIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPM 685
N+P+ + G + A+K L E LHK+G L+D+L+P + D
Sbjct: 657 INSPLRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD 716
Query: 686 LFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD------- 735
+ G R + + +P LR + + P L M +PD
Sbjct: 717 EEETSVPGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRR 776
Query: 736 ---PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGI-MQAQQFQ--- 787
P + R FG+ +P H V + G ++ +L SG + A+Q +
Sbjct: 777 KLYPPEDTTRCFGILTAKPIP-RIPHFPV--YTRSGEVTISIELQKSGFTLSAEQLELCT 833
Query: 788 ---EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRR 840
+ L IL + EF P+ D + Y +LP+ ++S +D+K +
Sbjct: 834 RLRQFILSRILRLEKPALEFKPVEAD--------SAYCVLPLNIVEDSNTLDLDFKFMED 885
Query: 841 CLSSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVT 894
S G P +++ P L+ D +++++ ++ + FY V
Sbjct: 886 IEKSEARIGIPNTQYTKQN-PFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VA 934
Query: 895 NIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED- 953
++ + S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 935 DVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQK 994
Query: 954 ------SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
S + + + ++ L PELC + I S + LPSI++RL LL
Sbjct: 995 GKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLT 1052
Query: 1002 AIELKHLLSASFPEGAEV 1019
A EL+ + GA+
Sbjct: 1053 AEELRSQTAIDAGVGAQT 1070
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSFLPLSAS 1209
K+IAD VEAL+G ++ G +AA FL +G++V E ++S + +P
Sbjct: 1549 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPPRCM 1608
Query: 1210 LDMATLEILLGH--------------QFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGD 1253
D E L H F ++ LLQAF H S +N + CYQRLEFLGD
Sbjct: 1609 FDHPDAERTLNHLISGFENFEKKINYMFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGD 1668
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
A+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 1669 AILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVI 1728
Query: 1314 NNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAILLDSGFNLNT 1360
+++V + + + + + R PK +GD+ ES GAI +DSG +L T
Sbjct: 1729 DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLET 1788
Query: 1361 VWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1789 VWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1819
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1661 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1718
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1719 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1766
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1767 MGDIFESLAGAIYMDSGMSLETVW 1790
>gi|403419584|emb|CCM06284.1| predicted protein [Fibroporia radiculosa]
Length = 1482
Score = 223 bits (567), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 213/708 (30%), Positives = 325/708 (45%), Gaps = 126/708 (17%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ +++ N+++ L TG GKTHIAVL + + + FLAPTVALV
Sbjct: 17 TRGYQQEMLDESLRMNLVIALDTGSGKTHIAVL---RMKLESERELSKVSWFLAPTVALV 73
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ++VI+ +I V G S+ K D W +D + V+V PQILL L+H +I
Sbjct: 74 EQQSEVIKSAIPVSVTAISGASEP-KQWIDPKLWRSVLDTHRVIVSTPQILLDALHHGYI 132
Query: 176 KM-ELIALLIFDECHHAQVKSNHPYAKIMKDFY----------KPDIMKVPRIFGMTASP 224
+ I LLIFDE HHA S HPY IM++FY + P + G+TASP
Sbjct: 133 DLGRDIGLLIFDEAHHAM--SKHPYNMIMQNFYFSLPPRSECVNTNGRMRPMVLGLTASP 190
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVR--VYQYGPVIND- 280
+ G N+ S ++LE LD+ + S E+L +V PV + Y P + D
Sbjct: 191 IYG------GNVDASFHALERNLDSTIRSSRMHREELAQYVHRPVFKHIFYDCPPYLEDE 244
Query: 281 -TSSSYVTCSE--QLAEIKREQYISALSRKL---HDHQSLRNTTKQLNR-LHDSMKFC-- 331
S++Y L +I+ + Y+ +L +L + R +QL++ + FC
Sbjct: 245 IPSANYQALQSVVDLMKIEDDPYVKSLRNQLKRANPGDEWRRIDQQLSKTIRKEDTFCHK 304
Query: 332 --------LENLGV-CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFA 382
+++G+ G A + +L E+IE D AS +
Sbjct: 305 GLRDFARAAQDIGLELGPWAADWYVL--------EVIEQAQRAADPYNNIMASWGN---- 352
Query: 383 AICRRDGIASDLSCIEVLKEPF--------FSKKLLRLIGIL----STFRLQ-QHMKCIV 429
+ + L+ ++ +K PF S K+ L L FR Q + +V
Sbjct: 353 --TEKRYLLDTLAKVKPIKVPFDENALFSGLSSKVWTLANCLVAEEKEFRSQNESYSGLV 410
Query: 430 FVNRIVTARALSYILQNLKFLAS-WRCHFLVGVNAGLKSMSRNAMKSI------------ 476
FV R T AL+ +L+ L +R LVG ++ S SR+A I
Sbjct: 411 FVTRRDTVLALAEVLRRLPQTGQLFRIGCLVGSSS---SFSRHAFLDITRQLVIDSHLDT 467
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L +FRSGE NL+++T V EEG+DIQ C VIRFDLP S+ QSRGRAR +S + +
Sbjct: 468 LAEFRSGEKNLIISTSVAEEGIDIQACGSVIRFDLPPNTVSWAQSRGRARKSRSSFVLMF 527
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMD--RTSSDAFTCSEERI----YKVDSSGACISAG 590
++G ++ ++ + + E +M D R S F ++ Y V S+GA ++
Sbjct: 528 ENGAEQR-QKVEEWEQTEYKMMTLYNDPNRISGAVFEEDDDEEVDLQYVVPSTGAILTLH 586
Query: 591 YGVSLLHRYCSKLPHDEF------FNPKPKF---------------YYFDDLGGTICHII 629
S L+ +C+ LP+ + +P P F Y G TI
Sbjct: 587 SATSHLNHFCAVLPNSAYQYAAYDLDP-PDFPEDWHSKQDEEKGIPVYQGPWGATIT--- 642
Query: 630 LPANAPIH-QIVGTPQS--SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
LP P H + TP+ + +A++ +A +LHK G LND+LLP
Sbjct: 643 LPRALPKHLRTFTTPREHRTKRSAQRHVAFQAYVELHKAGLLNDHLLP 690
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 140/531 (26%), Positives = 236/531 (44%), Gaps = 98/531 (18%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
L P L ++++ ++D+ ++ LPS++ L N+L + L+ L A P ++ +L
Sbjct: 952 LLPSLATVELVS-NQDVYFAM-YLPSVLRALANVLTVVSLRETLLAGSPV-SQAPFSLLT 1008
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
A+T QE + +RLE LGD LKY LF H EG L RR+ +AV+N L K
Sbjct: 1009 TAVTAPVSQELSNYQRLETLGDTVLKYVTTIQLFADHPLWHEGYLARRKDHAVSNIQLAK 1068
Query: 1086 LAARNNL-QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCS 1144
A L Q IRD+ F P ++ + + TE TI DD + +
Sbjct: 1069 QAISKRLYQWIIRDR-FVPRKWRPHYITDVDVQNVSTEETI-------PLDDKKKKTQA- 1119
Query: 1145 KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
L K +ADVVE+L+GA + GF A G+ + ++ I + ++ L
Sbjct: 1120 -----LSTKVLADVVESLIGAAYEHGGFDLAVDCTSIFGMGLTWK-----KIPVHIENIL 1169
Query: 1205 PLSASLD-----MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
++ L+ +A +E ++G+QF + LL+QA H S+ + Y+RLEFLGD+ LD
Sbjct: 1170 AITEELENPPPQLALVERMIGYQFSRKALLVQALTHASYHGDTASMSYERLEFLGDSALD 1229
Query: 1258 YLITSYLYSVYPK-LKPGQLTDLRSMLVNNQAFA------NVAVDQSFYKF--------- 1301
++T +LY K KPG + + LVN+ A + VD +++
Sbjct: 1230 MIVTDFLYHAPGKNYKPGHMHIRKEALVNSHFLAFICLRTHTDVDGISHRWTPAEGVTTT 1289
Query: 1302 ------------------LIFDSNVL-------SETINNYVDY-MITPSSTREVKEGPRC 1335
++ D NV + I + +D I P + +
Sbjct: 1290 PDRQTIHLYQCLLHSSHRVLDDQNVAFGRYKRGGQDIQDALDRDAIYPWAALTSLQ---S 1346
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDL 1395
PK + D+VES LGA+ +D+ +L V ++ + + ++E + D+
Sbjct: 1347 PKFVSDMVESLLGAVFVDAAGDLGAVRGVLRTL-------------GVVGIMERIVADDV 1393
Query: 1396 DLQFP-------SLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIA 1439
D+Q P + K+ K A+ +VT D +V +CA + E + +
Sbjct: 1394 DVQHPISRLTIWADKQEPKRKAKLEVTRADGNV---SCAVLVDGSEVVEVT 1441
>gi|371486410|gb|AEX31250.1| Dicer 2 [Aedes albopictus]
Length = 1659
Score = 223 bits (567), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 257/1025 (25%), Positives = 449/1025 (43%), Gaps = 119/1025 (11%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+ R YQ + M++N I+YL TG GKTHIA++ I E+ + KP F+ T
Sbjct: 12 VPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNT 71
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
VAL +QQA+ + ++ + + D W E +++V+V QILL L H
Sbjct: 72 VALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHG 131
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++ ++ I LLIFDECHH HP IM+ F + PR+ G++ + + +
Sbjct: 132 YLSIKHINLLIFDECHHGV--GEHPMHGIMEQFLRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLES---FVSSPVVRVYQY-----GPVINDTSSSY 285
P+ + LEN ++ + +V + F ++P + Y PV+ D S
Sbjct: 190 QVSPE-LERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSLRLSPVMVDIVRSI 248
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
S+ + + +Y++ + D K++ +L + + L + G+ G A
Sbjct: 249 EAFSQTINDFHLPKYLNQNKALMKDRPK---PLKEIKKLFTELVYQLGDTGLFGCSIALL 305
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DGIASDLSCIEVLKEP 403
L+ E + D S+ R A ++ F R + + S L E L
Sbjct: 306 GLIVQ--------FELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTR- 356
Query: 404 FFSKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH---- 456
F S K+ +LI L + K +VFV R +A+ L ++L+ + F +
Sbjct: 357 FSSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLK-IYFSQTEDADLILP 415
Query: 457 -FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
F+VG N + + +S + ++E+F+ E N++V T V EEG+D+Q C VI++D
Sbjct: 416 DFMVGSNGSMPESIEQILSAKKDRRVIERFKKNETNVIVTTNVLEEGIDLQMCNTVIKYD 475
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDS-GNQRELDLIKNFSKEEDRMNREIMDRTSS-- 567
P+T AS+ QS+GRARM S+Y ++++ Q+ L+ + + E + R ++ +T +
Sbjct: 476 HPQTFASYQQSKGRARMKDSQYMVMLNNEERQKFLEKYRLYKSIEQELQRCLIGKTINRP 535
Query: 568 ---DAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
DA E +Y + GA + A V LL+RYC +P D F N +
Sbjct: 536 DPLDADVHKE--LYNEIIPPFFTAKGAKLDALSAVQLLNRYCMGMPRDAFTNTNVTWERV 593
Query: 619 DDLGGTI-CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-- 674
D G I ++LP + + + I+G P +++ AK+ A A L++ L+++L+P
Sbjct: 594 DLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIPID 653
Query: 675 --QEDNATEDEPML----FSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYP-----V 723
+ N +D F DS G H + P + + P +
Sbjct: 654 CRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTTGCFPEPGKPCYIYVL 713
Query: 724 RLNFYFMQFIPDPADR-------IY---REFGLFVKSLLPGEAE-HLKVDLHLARGRSVM 772
R+ F Q DP++ +Y FG+ LP A+ V L L V
Sbjct: 714 RIGAGFEQ---DPSNENVNIFHSLYNSENNFGIMTTKPLPVLAKMKFFVTLGLINVHLVE 770
Query: 773 TKLV-PSGIMQAQ--QFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH 829
T +V P+ + + ++ + V D +F+ D+ S +L++P +
Sbjct: 771 TPIVLPNAGSEVELALLRQFHVTVFRDVLRLWKDFLVYDYDNGINS-----FLVVP-LKK 824
Query: 830 KNSVDWKIIR--RCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLV----Y 883
+DW++IR + LS P PS + E+D V Y
Sbjct: 825 STHLDWELIRQFQYLSEP--------------PSEMSTMARSRMDFEADNYRHKVILPWY 870
Query: 884 ATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
+K+ Y+VT + SP+ +++ S+ ++ +Y + + P Q L+ K +
Sbjct: 871 KNNKEQPYVVTMVHEHLTPGSPFPNAEYGSYANYFSEAYHLAVVKPDQFLIEVKGITSYL 930
Query: 944 NLLHNRKLEDSESHELEEY-FDD-LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
N L+ +D +S + + F++ L PELC F D +LLPS +HR+ LL+
Sbjct: 931 NRLNPGVEDDGKSTRSKHWRFNEILIPELCH--NYQFPADYWLKATLLPSALHRIHYLLL 988
Query: 1002 AIELK 1006
A +++
Sbjct: 989 AEKIR 993
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 55/421 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+LKA+TT+ + F LER E+LGDAFLK+A +L H EG LT + V+N NL
Sbjct: 1176 ILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKGQIVSNRNL 1235
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG-RRCPRICSKETERTIHSQ-------------- 1128
+ A + L ++ FDP + P+ + + HS
Sbjct: 1236 VYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRLTMTDEEIK 1295
Query: 1129 ---YDGRAPDDLNAEVRC-------SKGHHWLHKKTI-----ADVVEALVGAFIDDSGFK 1173
D + D+ A++ S ++L ++T+ AD +EAL+G + G +
Sbjct: 1296 TGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGVCVQTVGMQ 1355
Query: 1174 AATAFLKWIGI------QVEFEASQVTNICISSK-SFLPLSASL-DMATLEILLGHQFLH 1225
+ L + G+ ++ ++ N + + + + L + + +E +LG++F
Sbjct: 1356 RSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIESILGYKFKD 1415
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
R LLQA H S+ NR+ G YQ+LEFLGDAVLD+LI+ Y++ P + PGQLTDLRS L
Sbjct: 1416 RTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSAL 1475
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-------------MITPSSTREVK 1330
VNN A + V + +++ +S S+T+N +V + ++ S R++
Sbjct: 1476 VNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLVEESDRKMA 1535
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
E PK LGD+ ES + A+ LDSG + W+++ + + I+ F+ N + +R+L E
Sbjct: 1536 EFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMGNEIMTFTENTPIQIVRQLYE 1595
Query: 1389 L 1389
Sbjct: 1596 F 1596
>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control
protein dcr1; AltName: Full=RNA interference pathway
protein dcr1; Includes: RecName: Full=Endoribonuclease
dcr1; Includes: RecName: Full=ATP-dependent helicase
dcr1
gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
Length = 1374
Score = 223 bits (567), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 323/689 (46%), Gaps = 68/689 (9%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI---YELAHLIRKP---QKSICIF 110
Q+ RKYQ ++ A ++N ++ + TG GKT +AV LI E LI++ K I +F
Sbjct: 10 QLLRKYQQDVYNIASKQNTLLVMRTGAGKTLLAVKLIKQKLEEQILIQESNLEHKKISVF 69
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
L V LV QQA+ I + KV F G S I +Y V+V+ + L
Sbjct: 70 LVNKVPLVFQQAEYIRSQLPAKVGMFYGELSIEMSEQLLTNIILKYNVIVITADLFYLFL 129
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMK----VPRIFGMTAS 223
F+ + + L+IFDECHHA N YA+IM DFY K + K +PRIFGMTAS
Sbjct: 130 ARGFLSINDLNLIIFDECHHAI--GNDAYARIMNDFYHRAKAVLSKKHFTLPRIFGMTAS 187
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSS 283
P GK + NL + E L D+K + V + E L + P
Sbjct: 188 PFTGK----KGNLYHRLYQWEQLFDSKAHVVSENE-LADYFCLP--------------EE 228
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHA 343
SYV S +L + I L + + K L +++ ++G+
Sbjct: 229 SYVMYSNKLVVPPSDSIIKKCEETLQGCKLISRAVK--TALAETI-----DMGLWFGEQV 281
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP 403
L+ ET R + +A G + D A ++F + + + + I V
Sbjct: 282 WLYLVDFVETKRLKK-KALGKQLSDDE-ELAIDRLKIFVEDWKNNKYSDNGPRIPVFDST 339
Query: 404 FFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG-- 460
+ K+ +L+ +L +T+R ++ ++FV R TA LS ++ L L + R H +G
Sbjct: 340 DVTDKVFKLLELLKATYRKSDSVRTVIFVERKATAFTLSLFMKTLN-LPNIRAHSFIGHG 398
Query: 461 -VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
+ G SM+ K L KF++G+ N+L+AT V EEG+D+ +C LVIRF++ TV ++
Sbjct: 399 PSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYV 458
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS---DAFTCSE-E 575
QSRGRAR S++ + N EL + + EE + + + ++S D+ C E E
Sbjct: 459 QSRGRARAMASKFLIFL---NTEELLIHERILHEEKNLKFALSELSNSNIFDSLVCEERE 515
Query: 576 R-----IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC-HII 629
R +Y+V +GA ++ Y VSLL+ +C+ L D + P F L G C +
Sbjct: 516 RVTDDIVYEVGETGALLTGLYAVSLLYNFCNTLSRDVYTRYYPTFTAQPCLSGWYCFEVE 575
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSS 689
LP + G+P S+ AK++A DL ++G ++ +L P + + L +
Sbjct: 576 LPKACKVPAAQGSPAKSIRKAKQNAAFIMCLDLIRMGLIDKHLKPLDFRRKIAD--LETL 633
Query: 690 DSDSYEGEGSRGELHEMLVPAVLRQSWTK 718
+ D + EG E +E VP +SW K
Sbjct: 634 EEDELKDEG-YIETYERYVP----KSWMK 657
Score = 147 bits (371), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 213/468 (45%), Gaps = 66/468 (14%)
Query: 927 KHPKQP--LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGS 984
K K P L + PL +L NR +S ++ ++ + L I+ S+ + +
Sbjct: 827 KKDKAPSALCKKLPLRLNYSLWGNRAKSIPKSQQVRSFY------INDLYILPVSRHLKN 880
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM--LLKALTTEKCQERFSLERL 1042
S L+PSI++ +ENLLVA +SF E + ++ +ALT+ + Q F +RL
Sbjct: 881 SALLIPSILYHIENLLVA--------SSFIEHFRLDCKIDTACQALTSAESQLNFDYDRL 932
Query: 1043 EILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFD 1102
E GD FLK +FL E +L R ++N NL K+A L Y P +
Sbjct: 933 EFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCELPKYALSTPLE 992
Query: 1103 PCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG-HHWLHKKTIADVVEA 1161
+ CP K T +C L K IAD+VEA
Sbjct: 993 ------IRHWCPYGFQKSTSD------------------KCRYAVLQKLSVKRIADMVEA 1028
Query: 1162 LVGAFIDDSGFKAATAFLKWIGIQV-------EFEASQVTNICISSKSFLPLSASLDMAT 1214
+GA + DSG +A K + + + E+ N S + S +
Sbjct: 1029 SIGACLLDSGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYADSLRNVQFPYS---SY 1085
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCY---QRLEFLGDAVLDYLITSYLYSVYPKL 1271
+E +G+ F ++ LL AF+HPS G Y Q+LEFLGDAVLDY+I YLY YP
Sbjct: 1086 IEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNA 1145
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV-K 1330
G+LTD +S V N++ + + + +K++ +S + + I Y + + + RE
Sbjct: 1146 TSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELI---EAFRETAS 1202
Query: 1331 EGP------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
E P PK + D +E+ + AI LDSGF+L ++ ++ FL+ +
Sbjct: 1203 ENPWFWFEIDSPKFISDTLEAMICAIFLDSGFSLQSLQFVLPLFLNSL 1250
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
++L Y RLEF GD L + ++ +P + QL R +++N VA+D
Sbjct: 923 SQLNFDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCEL 982
Query: 1299 YKFLIFDSNVLSETINNYVDYMITPSSTREVKEG---PRCPKVLGDLVESSLGAILLDSG 1355
K+ + S L I ++ Y S++ + + K + D+VE+S+GA LLDSG
Sbjct: 983 PKYAL--STPLE--IRHWCPYGFQKSTSDKCRYAVLQKLSVKRIADMVEASIGACLLDSG 1038
Query: 1356 FNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLK 1403
L++ KI S +L SN E N +DL+ SL+
Sbjct: 1039 --LDSALKICKSLSVGLLDISNWD--------EWNNYFDLNTYADSLR 1076
>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1377
Score = 223 bits (567), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 196/667 (29%), Positives = 316/667 (47%), Gaps = 86/667 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-ELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ + +++ENIIV + TG GKTH+A+L I EL R+PQK I FLAPTVAL
Sbjct: 17 RNYQTEMFEASLQENIIVAMDTGSGKTHVALLRIMNELE--TRRPQKLIW-FLAPTVALC 73
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ VI +++ K RT G K W+ + +V+V +L + + F+
Sbjct: 74 FQQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSNGFV 133
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGA 230
++ + LLIFDE HH + HP +IM+DFY P ++K VP I G+TASPVV +
Sbjct: 134 RVSQLGLLIFDEAHHCMRR--HPANRIMQDFYHPTLVKQGPDAVPGILGLTASPVVRTNS 191
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTC- 288
+ + ++N++ A ++L + P ++ Y PV I+D +S T
Sbjct: 192 QELSMIESNMNAICKTPRAH------RQELLTHTHRPHLQQIWYTPVNIDDPTSGTRTLR 245
Query: 289 ----SEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLENLG 336
+ + +++ + Y+ L R D ++L+ + L R + + LG
Sbjct: 246 ALIHAWETIDLEDDPYVKQLRRSTFDGKALQKALLTRKTYCNESLRRFVERSCHIFQELG 305
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
Y + + +R + IDDS E ++ +AS LS
Sbjct: 306 ---GWAVDYFIHASIRRLREK--------IDDSALMLDWDNEE-------KEYLASFLSN 347
Query: 397 IEVLK-------EPFF-SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
I ++ E F S KL LI LS+ ++F + T L+ +L
Sbjct: 348 IATIQSDPPRRPEDFIPSPKLEALISFLSSTD-DSTFSGLIFAKQRATVTVLATLLSVHP 406
Query: 449 FLAS-WRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+RC VG + G +S + L +FRSG+ NL+VAT V EEG+DI
Sbjct: 407 LTKDRFRCAAFVGWSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDI 466
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ---------RELDLIKNFS 551
C +VI +D P V SF+Q RGRAR +S +A L + ++ E +I+ +
Sbjct: 467 SACSVVICYDKPANVKSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEAMIEAYQ 526
Query: 552 KEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
+E + + T ++ T ER ++V+S+GA ++A V+ LH +CS LP + +
Sbjct: 527 DDERKRCEALALETMAEVVT---ER-FEVESTGAVLTADTAVARLHHFCSILPQQPYVDN 582
Query: 612 KPKFYY-FDDLGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGA 667
+P+ + +D G LP+ + + + G + E AA K+A + + L++ G
Sbjct: 583 RPELSFEYDGTGRRRGTFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGL 642
Query: 668 LNDYLLP 674
LND+LLP
Sbjct: 643 LNDHLLP 649
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 42/328 (12%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
+P C + + F+ I + +I+ RLE L+A L + + S ++
Sbjct: 882 IPATACTIDRLPFTDTIFGLF--ISAILDRLEATLIATRLCETI---LQDVQFSSTRHVI 936
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
A++ Q +R E GD+ LK+ V L++ H EG L+ R V N+ L +
Sbjct: 937 TAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLAR 996
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A L +I + F P ++ A P I K E G+ P
Sbjct: 997 AALDVGLDAFILTRRFTPRKWTA-----PLISEKAVE------VAGKRP----------- 1034
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
L K +ADVVE+L+GA D G A ++ + ++E IC + +
Sbjct: 1035 ----LSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIE--------ICPITPPPVH 1082
Query: 1206 LSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITS 1262
SA M +L+ LG+ F++ LL++A HPS YQRLEFLGDAVLD ++
Sbjct: 1083 ESAPHVMNDSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVH 1142
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
+ + G++T ++ L N A
Sbjct: 1143 AMAHHAVECPQGEMTMIKHALTNANLLA 1170
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQR EF GD+VL + ++ LY +P G L++ R +V N A A+D F++
Sbjct: 950 YQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAFIL- 1008
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
T + +I+ + + P KVL D+VES +GA +D G
Sbjct: 1009 ---TRRFTPRKWTAPLISEKAVEVAGKRPLSSKVLADVVESLIGAAYMDGG 1056
>gi|395330301|gb|EJF62685.1| hypothetical protein DICSQDRAFT_104190 [Dichomitus squalens
LYAD-421 SS1]
Length = 1453
Score = 222 bits (566), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 190/670 (28%), Positives = 311/670 (46%), Gaps = 70/670 (10%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R+YQ E+ +A + N+I L TG GKT I+ LLI ++ + I +FL P VAL
Sbjct: 13 LPRRYQEEIFVRAQQGNVIAALDTGSGKTFISTLLIKWISAQ-ESTEHKITVFLVPKVAL 71
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
VQQQ + I + +VR F G + + W + + +V VM QI L L H
Sbjct: 72 VQQQGEFIAKQTSLRVRMFSGATAHDMSDRGGWANDFETADVFVMTAQIFLNLLTHSHWS 131
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA-- 234
+ + LL+FDECHH + NH Y IM+++++ P++FGMTASP+ +A++
Sbjct: 132 LSKVCLLVFDECHH--TRKNHAYNGIMREYFQTAEGCRPKVFGMTASPIWNPRNAAESLS 189
Query: 235 ----NLPKSINSLENLLDAKV-YSVEDAEDLESFVSSP-VVRVYQYGPV-----INDTSS 283
NL + +++ +D + +S E ++++ +P V YQ + +++T
Sbjct: 190 TLEKNLDAKVIAVKEHVDELIGHSPRPEELIKTYRQAPEVYPEYQKKSLRLRLALHNTPP 249
Query: 284 SYVTCSEQLAEIKREQYIS--ALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV---C 338
++++ Y S +L + ++ QL + ++++ +E L
Sbjct: 250 EVGIPADKILTRYEVTYYSLGPFGAELFLYTEMKQRVVQL--IQEAIESAMEVLTAEQYA 307
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
H Y+ D + +L E E N + + F V + ++
Sbjct: 308 NVAHGGYLSEVPD-AVHPKLREFE-NILAEFSADFDDPPDGVLPTPIPLSWCSPK---VK 362
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA-SWRCHF 457
VL E FS+ STF + IVFV + A L+ +L+ + FL + +C
Sbjct: 363 VLAEELFSR-------YTSTF------QGIVFVEQRHIATCLASMLRRIPFLVHTIKCEP 409
Query: 458 LVGVNAG------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
LVG +G LK M+ + ++ FR LNLLVAT V EEGLD C LVIRFD
Sbjct: 410 LVGHGSGAVAKSHLKGMAMRNQRDTVQLFRERRLNLLVATSVAEEGLDFPACDLVIRFDP 469
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR------- 564
+ + ++QSRGRAR S + +V G+Q + + F + E + + R
Sbjct: 470 VQHMVGYLQSRGRARHKTSTFIIMVQEGSQAQAERYLEFLRSEPHLKKVYQQRDLVPPDV 529
Query: 565 -------TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
+ D F + Y V S+GA ++ +SLL+ CS +P D F P Y
Sbjct: 530 EEEEDESDAPDPFDLARRERYVVPSTGAILTYNTAISLLNHLCSLIPRDR-FTPMHAPRY 588
Query: 618 FDDLGGTIC---HIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
D T+ + LP+N +++ G P+ S + A++ A A++ LH L +DYLLP
Sbjct: 589 TGDFVATVTLPSTLPLPSNLLVYE--GPPKRSKKEARRAAAFFAVKSLHALNVFDDYLLP 646
Query: 675 -QEDNATEDE 683
+ A +DE
Sbjct: 647 AKSSGAAQDE 656
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 203/429 (47%), Gaps = 39/429 (9%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
LP ELC+ +I + + S S+LP + HRL ++ A E++ L + ++L+
Sbjct: 902 LPIELCRWALI--PRHVYQSFSILPELCHRLTDVWRAHEVRTALKLP-----PIVDDLLV 954
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+A+T F+ +RLE GDA LK HL+ + EG+L + A+ N LL
Sbjct: 955 QAITLPSANAGFNNQRLETFGDAVLKLCAVVHLYNRYPHRHEGQLDNMKRTAIANRTLLA 1014
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A + L+ ++ + ET+ +Y + L A C +
Sbjct: 1015 RALEHGLEEHL---------------------TPETQSIRLWRYVVTGDEALFAVRPCRR 1053
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
++++ D +EA++GA G A +G+ F + S +
Sbjct: 1054 ALRQYPRRSLQDCMEAILGASFATGGIDMALRAGTALGLS--FGGPTPWYVRYSGRLKEA 1111
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSY 1263
+A L A L+ LG+ F H LLL+A HPSF R C YQRLEFLGDA +D ++T Y
Sbjct: 1112 PAAPL-FAGLQETLGYTFKHGHLLLEAITHPSF-RSTDCSSYQRLEFLGDAFIDMVVTEY 1169
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMIT 1322
LY +P GQL+ RS V AFA++AV + + +K L+ ++ LS I+ +V +
Sbjct: 1170 LYRKFPSATSGQLSWARSRAVCGPAFASIAVKRLALHKLLLINNVELSMAISKHVPILEE 1229
Query: 1323 PSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNL 1378
+ + G + PK L D++ES LGA+ +D +N + I L+ +L +L
Sbjct: 1230 ITDEEIIINGWKHDPPKALSDVLESVLGALFVDCDYNYDKAAAITEMVLEDLLAALRPDL 1289
Query: 1379 QLNPIRELL 1387
+P+ EL+
Sbjct: 1290 PKDPVTELM 1298
>gi|324500060|gb|ADY40039.1| Endoribonuclease dcr-1 [Ascaris suum]
gi|333440972|gb|AEF32761.1| DCR-1 [Ascaris suum]
Length = 1970
Score = 222 bits (565), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 276/1089 (25%), Positives = 457/1089 (41%), Gaps = 210/1089 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA N+IV LGTG GKT IAVLLI E + +P ++ FL V+
Sbjct: 40 RDYQIELLDKACRGNVIVPLGTGSGKTFIAVLLIKEHTCKLIEPLENGGKRAFFLVDKVS 99
Query: 117 LVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQA IE KV G S + I +++V+V Q+ L L H F
Sbjct: 100 LVDQQAAHIEHHTTLKVGRMHGHLNSDIWSDQSKFNTFIAEHQVVVSTAQVFLDVLDHAF 159
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
M ALLIFDECHH + S H Y IM + + + P+I G+TAS + K + +
Sbjct: 160 FNMNNAALLIFDECHHV-LGSKHAYRVIMHRYSQLPKSERPKILGLTASLINNK--TPPS 216
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
NL + + LE ++ + ++E A DL V V +YG
Sbjct: 217 NLERVLEKLELIMQS---NIETASDL--------VSVAKYG------------------- 246
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
K ++++ ++D + + K ++ L D C+E C H + D
Sbjct: 247 AKPKEFVIECEDFIYDE--CKASRKVISLLEDLRAMCME----CREFHPEF-----DVDP 295
Query: 355 RNELIEAEGNTIDD----------SLCRFAS--------------------QASEVFAAI 384
R L+EA T+ +C+ Q E +
Sbjct: 296 RKPLMEAINRTLSVFKQMGPWCAWKVCQLFQRQLKKHIGQPFLTEKQILFLQMGETTMRL 355
Query: 385 CRR--DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKC--------IVFVNRI 434
++ D + C LK P +++RL+ IL + K I+FV +
Sbjct: 356 SKKILDEKVFGVKCYAELK-PLLPNRIVRLMEILDYYSPSNISKIDPNFSFCGIIFVKQ- 413
Query: 435 VTARALSYILQNL-KFLASWR--------CHFLVGVN-AGLKSMSRNAM----KSILEKF 480
R ++Y++ L K +A W F++G + A + S A+ + +L KF
Sbjct: 414 ---RYVAYVMNTLVKAIAKWDKDRFGYVVSDFVIGYSSANIGSEETMALHKRQEEVLRKF 470
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
R +LNLLVAT V EEG+D++ C +VIRFD P ++IQS+GRAR + Y L++ +
Sbjct: 471 RQKQLNLLVATSVLEEGVDVKQCNVVIRFDRPTDYRAYIQSKGRARKEGASYYILIEHSD 530
Query: 541 QREL--DLIKNFSKEEDRMNREIMDRTSSDAFT-CSEERI------YKVDSSGACISAGY 591
+ DL F E+ + R D CSE+ + Y V+S+GA ++
Sbjct: 531 RANCSSDLKDFFQIEQMLLKRYRTAHNPPDGMPLCSEQEVDAKVAPYVVESTGARVTMSS 590
Query: 592 GVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTICH---IILPANAPIHQ--IVGTPQS 645
++L++RYC+KLP D F P+ + G+I + ++LP N+P+ ++ TP
Sbjct: 591 AIALVNRYCAKLPSDIFTRLVPQNRIIPVSVNGSILYKAELLLPINSPLKNGIMLTTPME 650
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN-----ATEDEPMLFSSDSDSYEGEGSR 700
+ + A+ L+ LH+ LND+LLP + A +D+P F + + G R
Sbjct: 651 TKKLAQMAVALETCRRLHEHKELNDHLLPVGKDTITLTALDDDPDEFIPNMNYKVGSARR 710
Query: 701 GELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI------PDPADR-----IYRE--FGLF 747
+L++ + L + + M I +P +R I E FG
Sbjct: 711 KQLYDKRMAKGLNDALPDVDTTCLIYVMEMDLIKAVTGAANPKNRKIVNPIDTEFCFGFL 770
Query: 748 VKSLLPG--------EAEHLKVDLHLARGR----SVMTKLVPSGIMQAQQFQEMFLKVIL 795
K +P ++ ++ LA+ R + M +L+ + F +L
Sbjct: 771 SKKKIPNVPSFPVFLRQGRMQANIFLAKSRLQVDAEMLELL-------KAFHHYIFDSVL 823
Query: 796 DRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN--------SVDWKIIRRCLSSPVF 847
+ FVP + L++P+ +N +D+ +R +SS
Sbjct: 824 RLVKGGLAFVP--------EKAPVSILIVPLRRERNELTNQVDFKLDYTYVRNVVSS--- 872
Query: 848 GTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHK-----KWFYLVTNIVFEKNG 902
G + R +PS +L + ++++V ++ ++Y+ + + N
Sbjct: 873 ---IGEMPR--VPSEEERRLFK--FDVTKFQDAVVMPWYRDKEHPSFYYVAE--IIDANP 923
Query: 903 YSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEY 962
S + D ++ D+ I Y I + +QPLL NLL R S + +EE
Sbjct: 924 GSKFPDEKFANFNDYFIQKYNIEIYDQQQPLLDVDYTSSRLNLLMPRHTSRSRTRVMEER 983
Query: 963 FDD--------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHL------ 1008
L PEL + I S + + ++ LP++++R+ LL+A EL+
Sbjct: 984 KPGETSSQGQILVPELVDVHPIAAS--LWNVIAALPTLLYRINCLLLADELRETIVSEAL 1041
Query: 1009 -LSASFPEG 1016
L + PEG
Sbjct: 1042 GLDSKVPEG 1050
Score = 194 bits (493), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 219/469 (46%), Gaps = 97/469 (20%)
Query: 1012 SFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
S P G VS LL+ALT + +LERLE +GD+FLKYAV +LF ++ EG+L+
Sbjct: 1440 SHPYG--VSPCTLLQALTMSNASDGINLERLETVGDSFLKYAVTDYLFHMNPEQHEGKLS 1497
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP-------CQFFALGRRCPRIC-SKETER 1123
RS V+N NL +L + NL + FDP C + P ++E ++
Sbjct: 1498 FARSKEVSNCNLYRLGKKRNLPSLMVGAKFDPNDSWLPPCYAPTSDFKAPNSSDAEERDK 1557
Query: 1124 TIHSQYDGRAP-DDLNAEVRCSKG------------------------------------ 1146
+ +G A + N +V+ G
Sbjct: 1558 IMEKVLEGSAAIEQTNFQVKVRTGWDEADSSSEVRQISDGVETINFPRGVASTWDVAEEI 1617
Query: 1147 ---------HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT--- 1194
+L K+IAD VEAL+GA + + G A F+KW+G++V E +
Sbjct: 1618 SPLPYNMLTQQYLGDKSIADAVEALIGAHLLELGPTATLKFMKWVGLKVLTEPVTLDPPL 1677
Query: 1195 ------------NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NR 1240
IC ++ ++ + LE + ++F R LLQAF H S+ NR
Sbjct: 1678 LRFIDTPQEPELAICKLNEFWV----QFQFSKLEDSICYRFKDRAYLLQAFTHASYYKNR 1733
Query: 1241 LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYK 1300
+ GCYQRLEFLGDAVLDY+IT +L+ + PG LTDLRS LVNN FA++AV +F+K
Sbjct: 1734 ITGCYQRLEFLGDAVLDYVITRFLFQHPRQYSPGVLTDLRSALVNNTIFASLAVKYNFHK 1793
Query: 1301 FLIFDSNVLSETINNYVD----------------YMITP--SSTREVKEGPRCPKVLGDL 1342
+ L I +V YM+T +E PK +GD+
Sbjct: 1794 HFVAMCPGLHHMIEKFVRLCAEKNFSGANFNAEMYMVTTEEEIDEGEEEDIEVPKAMGDI 1853
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLEL 1389
ES GAI LDSG +L+ VW++ + + ++ +N +PIRELLEL
Sbjct: 1854 FESVAGAIYLDSGRSLDVVWRVFYNLMKETIEECCNNPPKSPIRELLEL 1902
>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
bisporus H97]
Length = 1717
Score = 222 bits (565), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 207/674 (30%), Positives = 308/674 (45%), Gaps = 81/674 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
RKYQ E+ ++A +EN+I L TG GKT I +LLI ++ L K I IFL P VALV+
Sbjct: 17 RKYQEEIFERAQKENVITALNTGSGKTLIGLLLIKWMSALESSGDKLI-IFLVPRVALVE 75
Query: 120 QQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQAK + ++ + G L W+K++ + +V+VM PQIL+ + H +
Sbjct: 76 QQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTPQILVNFITHSIWSLR 135
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
IALL+FDECHHA + NHPY IM++ FY ++ P+IFGMTASPV
Sbjct: 136 QIALLVFDECHHA--RKNHPYNIIMQEYFYIKEVEDRPKIFGMTASPVWNTKDPV----- 188
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSP----VVRVYQYGPVIND-TSSSYVTCSEQL 292
S+ +LE LD+ + SV + D E V +P ++ ++ P D +++ C +
Sbjct: 189 GSLLTLETNLDSVIISVREHVD-ELAVHTPRPSELITIFPAPPDNYDFHDPNFLRCLSVI 247
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
+ E A S + H + T L S+ LE V ++ L E
Sbjct: 248 SPATWEHLEVAWSSLVMRHDA---TLYNLGPYCASLFLYLEVRHVLKSVQTG---LRTIE 301
Query: 353 TMRNELIE-------------AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
+ E++E E N I D L F R+ + +
Sbjct: 302 DTKMEVVEYVAGASAPKRNPPEELNLIRDILLD--------FEGFFWRNDCPNRVPIPVP 353
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL-ASWRCHFL 458
LK + S K+ L IL F + + IVFV + A LS IL + L R L
Sbjct: 354 LK--WCSPKVDALKRILLEF-YTPNFQVIVFVEQRQVAACLSKILPVIPGLEGKIRSAHL 410
Query: 459 V--GVNA-GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
V GVN+ G+ + ++ FR GE+N+L+AT V EEGLD C LV+RFD +
Sbjct: 411 VGQGVNSDGVSKATDTYHGDAIQAFRKGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHM 470
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT---- 571
++QSRGRAR S + ++ +Q + +N +E MN+ R + A T
Sbjct: 471 VGYVQSRGRARNADSRFIVMIRQDDQVSFEFYQNLLAQEPEMNKAYQGRQRA-AVTMPAQ 529
Query: 572 ---------------CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP-KPKF 615
S ER Y V S+ A +S + LL+ C+ +P D + P KPKF
Sbjct: 530 QEDEDEEEDLNPLDLASRER-YVVPSTEAVLSYDSAIGLLNYLCALIPCDAYTPPHKPKF 588
Query: 616 YYFDDLGGTICHIILPANAPIH----QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
G + LP + P+ G + S + AK+ A++ LH+L + Y
Sbjct: 589 -----TGDFQSTVQLPLSIPLPPDQLTYTGPLKCSKKEAKRAVAFLAVKRLHELDIFDQY 643
Query: 672 LLPQEDNATEDEPM 685
LLP + +E M
Sbjct: 644 LLPTPGSTLGEEEM 657
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 193/423 (45%), Gaps = 34/423 (8%)
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQE 1035
+ S D+ +LP++ H++ + A + + F + ++L++ALT
Sbjct: 924 VDMSPDVIRGFEILPTLCHKITDAYRAQSTRLNIGLPF-----IPDDLLMEALTLPNVDA 978
Query: 1036 RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
FS +RLE LGDA L HL + EG+L+ R+ V+N L+ A L+ +
Sbjct: 979 DFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSNKFLVSCARTVELERF 1038
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
I + ++ + ++ + +++ Q + ++ +
Sbjct: 1039 ISSEKMGVEKWPFVEQKGYEVKEIRNRKSVKRQ---------------------IPRRGL 1077
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATL 1215
D VEAL+GA G A + + F Q + +A L
Sbjct: 1078 QDCVEALLGASFLAGGI--PMALRTGVCFGLSFGGIQPWGERCRRAEAREIGVPALVAGL 1135
Query: 1216 EILLGHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
E +G+ F + LL++A HPS YQRLEFLGD+V+ L+T YLY +PK
Sbjct: 1136 EKEIGYVFENPELLVEAVTHPSLEFSSTPSYQRLEFLGDSVIKMLVTEYLYHKFPKATSH 1195
Query: 1275 QLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
QL R+ + + A A++A+ + +K+L+ +S L+ IN YV + + ++ V+ G
Sbjct: 1196 QLALPRTKAICSPALAHIAIRKLHIHKYLLQNSIDLNNAINLYVPVLESATADEIVRRGW 1255
Query: 1334 RC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELLEL 1389
R PK + D ES +GA+ +D G++L+ I+ ++ IL+ N + +P+ E+LE
Sbjct: 1256 RYDPPKAISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILEVLNPSIPKDPVSEVLEW 1315
Query: 1390 CNS 1392
S
Sbjct: 1316 LAS 1318
>gi|167234451|ref|NP_001107840.1| Dicer-2 [Tribolium castaneum]
gi|270002830|gb|EEZ99277.1| hypothetical protein TcasGA2_TC001108 [Tribolium castaneum]
Length = 1623
Score = 221 bits (563), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 268/1033 (25%), Positives = 455/1033 (44%), Gaps = 137/1033 (13%)
Query: 52 DKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---IC 108
D++ + R YQ+ L + A+ EN I+YL TG GKT IA++++ +L I +P I
Sbjct: 2 DEEDELKPRNYQVNLMEIAIRENTIIYLPTGSGKTFIAIMVLKQLCAPILRPYSDGGKIS 61
Query: 109 IFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILL 167
+ L +VALV Q K + + F V T+ G + S +WE++ ++Y+V++M QI++
Sbjct: 62 VILVNSVALVDQHGKYVRDHATFSVGTYTGEMNVDFWSEAEWEQQFNKYQVVIMTSQIMV 121
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
+ +RFI + + L+IFDECHH + P +IMK F+ PR+ G+TA+ +
Sbjct: 122 NLINNRFIDLGKVNLMIFDECHHGV--EDQPMRQIMKHFH--SCTDKPRVLGLTAT--LL 175
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
G + + I SLE +KV +VE + + + ++P +
Sbjct: 176 NGNCKLSKVMDEIRSLEVTFHSKVATVEGLDVVVGYSTNP--------------QELFKV 221
Query: 288 CSEQLAEIKREQYISALSRKLHD--HQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
C + +Q ++ L + ++D H ++++ +N L LE V +L
Sbjct: 222 CQPGALSLDAKQVLNNLRQLINDLEHINIKDEQNSVNLLQSETLKPLEPSDVLKSLRN-- 279
Query: 346 ILLSGDETMRNELIEAEG-------NTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
L D + E++ A G + I + Q ++F + + + + + +
Sbjct: 280 --LISDLMIHIEMLGAFGGHIACVAHMIQIERIKKHCQNHQLFIVL---NYVMTIMGTTK 334
Query: 399 VLKE-------------PFFSKKLLRLIGILSTFRLQ--QHMKCIVFVNRIVTARALSYI 443
+L E F S K+L++ IL ++ + + + C+VF R TA+ L +I
Sbjct: 335 LLLEETMAGYEPLEKIRKFSSDKVLKVFEILDEYKTKSDEELCCLVFTKRRFTAKVLHHI 394
Query: 444 LQ-----NLKFLASWRCHFLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLVATK 492
+ + KF + +F+VG + +R + + +L F S E+N+LV++
Sbjct: 395 IDKASQVDPKFY-HIKSNFVVGNKNNPYNDTRENLYITKKNREVLNSFVSKEINVLVSSN 453
Query: 493 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSK 552
V EEG+DI C LVI+FD E S+IQS+GRAR +S Y +V++ + + D + K
Sbjct: 454 VLEEGVDIPKCTLVIKFDKSEDYRSYIQSKGRARHIKSLYYTIVETTDVAKYDKKYSAFK 513
Query: 553 E-EDRMNREIMDRTSS-DAFTCSEER-IYKVDS---------SGACISAGYGVSLLHRYC 600
E E+ +N ++ + S D SE R +Y D + A ++ V+LL RYC
Sbjct: 514 EIENLVNDLLIGKNSERDHPNLSEIRNMYNEDKLEPYYVNGPNSAQVNMTSAVALLCRYC 573
Query: 601 SKLPHDEFFNPKPKFYYFDDLGGTICHII--LPANAP-IHQIVGTPQSSMEAAKKDACLK 657
S L D++ P++YY +D ++ LP P I IVG + + AK+ A L
Sbjct: 574 SNLASDKYTTYAPEWYYEEDSSSAKLRVVIFLPVVCPLIDPIVGPYMHNKKDAKRAAALV 633
Query: 658 AIEDLHKLGALNDYLLPQEDNATE-DEPMLFS---SDSDSYEGEGSRGELHEMLVPAVLR 713
A LH+ G L++ LLP + E D LF+ + +S G + LH+ + ++
Sbjct: 634 ACIKLHQCGELDNNLLPWKKQLDEADVSYLFTHWPQEKESDAGNKKKKRLHDKEIAPSVK 693
Query: 714 QSWTKSQYPVRLNFYFMQFIPDP----------ADRIYR------EFGLFVKSLLPGEAE 757
+ P R+ Y +P A IY +FGL LP +
Sbjct: 694 SAIQ----PDRV-LYLHTININPQYKRSDDLKNAVTIYDLYKTPLKFGLLSPKPLPDLCK 748
Query: 758 HLKVDLHLARGRSVMTKL--VPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCES 815
D + + + V + ++ +E V D E EF+
Sbjct: 749 FPLFDSNGTLEIEIRNNVREVEFAANEMKEMREFHFLVFNDLLEILKEFLIFDN----TG 804
Query: 816 SSSTFYLLLPVIFHKNS--VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSS 873
+S L++PV VD+++IR + P + +R +L LH S
Sbjct: 805 MNSEMLLVVPVQDRCGDVCVDFRVIRDNKNLKNKLEPAAT-ERINLNVTEETYLHKIVSP 863
Query: 874 ESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPL 933
Y + K + +VT + +K+ S + + + + V + + + + P QPL
Sbjct: 864 --------WYRSPPKMY-VVTKVCPDKSALSRFPNHEYPNFVSYYSEKHSLSILDPSQPL 914
Query: 934 LRAKPL------FRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
L K L F+ R RK E ELEEY L PEL + F +
Sbjct: 915 LLVKGLSERLNAFKPRGAGGKRKKEKM-YEELEEY---LIPELVIKQ--EFPSCLWIQAR 968
Query: 988 LLPSIMHRLENLL 1000
LPSI+ RL LL
Sbjct: 969 FLPSILSRLAYLL 981
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 202/424 (47%), Gaps = 54/424 (12%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+ +ALT + + +LERLE LGD+FLK+ ++ T +EG+ T + V+N NL
Sbjct: 1146 IYQALTAAEANDIVNLERLETLGDSFLKFVASLYIIFKFPTYNEGKSTTLKGKLVSNKNL 1205
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHS-------------QYD 1130
L R NL +++ P + P+ SK +S Q
Sbjct: 1206 YYLGVRKNLGGILKNSDLSPSDWVPPCFCIPQTISKAIGNKEYSVVSLFNCCISPEEQVS 1265
Query: 1131 GR--------------APDDLNAEVRCSK--GHHWLHKKTIADVVEALVGAFIDDSGFKA 1174
G APD+ N+ ++ K+IAD VEAL+GA+ G +
Sbjct: 1266 GNLNRKTLSDMTTEEIAPDEENSYGNMCNFLNKQYVGDKSIADSVEALLGAYFLSGGIQG 1325
Query: 1175 ATAFLKWIG-------IQVEFEASQVTNICISSKSFLPLSASL-DMATLEILLGHQFLHR 1226
F++WIG IQ E +QV + + + + +E LG+ F +R
Sbjct: 1326 GIKFMEWIGILPLSEQIQRLIETTQVDPVLNKKSTKTDVDFHMPQWREIEQRLGYTFTNR 1385
Query: 1227 GLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LLQA H S+ NR+ Y+RLEFLGDAVLD+LIT Y++ L+PGQ+TDLRS LV
Sbjct: 1386 AFLLQALTHSSYSPNRITLSYERLEFLGDAVLDFLITCYIFEHCGHLEPGQVTDLRSSLV 1445
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS-------------STREVKE 1331
NN FA++ V F+KFL+ ++ L I+ + DY+ + + + E
Sbjct: 1446 NNNTFASLVVRCGFHKFLLMMNSNLQGHIDKFADYLASKNYVIDDEVLILLEEDEMNIAE 1505
Query: 1332 GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
PKVLGD+ E+ GAI LDS +L TVW++ + I FS N+ N IR L E
Sbjct: 1506 YVDVPKVLGDIFEALAGAIYLDSNKDLKTVWRVFYKIIWREIDLFSKNVPKNVIRRLYEC 1565
Query: 1390 CNSY 1393
Y
Sbjct: 1566 HTVY 1569
>gi|371486404|gb|AEX31247.1| Dicer 2 isoform A [Aedes albopictus]
gi|371486406|gb|AEX31248.1| Dicer 2 isoform B [Aedes albopictus]
Length = 1659
Score = 221 bits (563), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 257/1025 (25%), Positives = 448/1025 (43%), Gaps = 119/1025 (11%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+ R YQ + M++N I+YL TG GKTHIA++ I E+ + KP F+ T
Sbjct: 12 VPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNT 71
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
VAL +QQA+ + ++ + + D W E +++V+V QILL L H
Sbjct: 72 VALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHG 131
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++ ++ I LLIFDECHH HP IM+ F + PR+ G++ + + +
Sbjct: 132 YLSIKHINLLIFDECHHG--VGEHPMHGIMEQFLRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLES---FVSSPVVRVYQY-----GPVINDTSSSY 285
P+ + LEN ++ + +V + F ++P + Y PV+ D S
Sbjct: 190 QVSPE-LERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSLRLSPVMVDIVRSI 248
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
S+ + + +Y++ + D K++ +L + + L + G+ G A
Sbjct: 249 EAFSQTINDFHLPKYLNQNKALMKDRPK---PLKEIKKLFTELVYQLGDTGLFGCSIALL 305
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DGIASDLSCIEVLKEP 403
L+ E + D S+ R A ++ F R + + S L E L
Sbjct: 306 GLIVQ--------FELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTR- 356
Query: 404 FFSKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH---- 456
F S K+ +LI L + K +VFV R +A+ L ++L+ + F +
Sbjct: 357 FSSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLK-IYFSQTEDADLILP 415
Query: 457 -FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
F+VG N + + +S + ++E+F+ E N++V T V EEG+D+Q C VI++D
Sbjct: 416 DFMVGSNGSMPESIEQILSAKKDRRVIERFKKNETNVIVTTNVLEEGIDLQMCNTVIKYD 475
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDS-GNQRELDLIKNFSKEEDRMNREIMDRTSS-- 567
P+T AS+ QS+GRARM S+Y ++++ Q+ L+ + + E + R ++ +T +
Sbjct: 476 HPQTFASYQQSKGRARMKDSQYMVMLNNEERQKFLEKYRLYKSIEQELQRCLIGKTINRP 535
Query: 568 ---DAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
DA E +Y + GA + A V LL+RYC +P D F N +
Sbjct: 536 DPLDADVHKE--LYNEIIPPFFTAKGAKLDALSAVQLLNRYCMGMPRDAFTNTNVTWERV 593
Query: 619 DDLGGTI-CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-- 674
D G I ++LP + + + I+G P +++ AK+ A A L++ L+++L+P
Sbjct: 594 DLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIPID 653
Query: 675 ---QEDNATE---DEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYP-----V 723
Q N + F DS G H + P + + P +
Sbjct: 654 CRNQLHNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTTGCFPEPGKPCYIYVL 713
Query: 724 RLNFYFMQFIPDPADR-------IY---REFGLFVKSLLPGEAE-HLKVDLHLARGRSVM 772
R+ F Q DP++ +Y FG+ LP A+ V L L V
Sbjct: 714 RIGAGFEQ---DPSNENVNIFHSLYNSENNFGIMTTKPLPVLAKMKFFVTLGLINVHLVE 770
Query: 773 TKLV-PSGIMQAQ--QFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH 829
T +V P+ + + ++ + V D +F+ D+ S +L++P +
Sbjct: 771 TPIVLPNAGSEVELALLRQFHVTVFRDVLRLWKDFLVYDYDNGINS-----FLVVP-LKK 824
Query: 830 KNSVDWKIIR--RCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLV----Y 883
+DW++IR + LS P PS + E+D V Y
Sbjct: 825 STHLDWELIRQFQYLSEP--------------PSEMSTMARSRMDFEADNYRHKVILPWY 870
Query: 884 ATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
+K+ Y+VT + SP+ +++ S+ ++ +Y + + P Q L+ K +
Sbjct: 871 KNNKEQPYVVTMVHEHLTPGSPFPNAEYGSYANYFSEAYHLAVVKPDQFLIEVKGITSYL 930
Query: 944 NLLHNRKLEDSESHELEEY-FDD-LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
N L+ +D +S + + F++ L PELC F D +LLPS +HR+ LL+
Sbjct: 931 NRLNPGVEDDGKSTRSKHWRFNEILIPELCH--NYQFPADYWLKATLLPSALHRIHYLLL 988
Query: 1002 AIELK 1006
A +++
Sbjct: 989 AEKIR 993
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 55/421 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+LKA+TT+ + F LER E+LGDAFLK+A +L H EG LT + V+N NL
Sbjct: 1176 ILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKGQIVSNRNL 1235
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG-RRCPRICSKETERTIHSQ-------------- 1128
+ A + L ++ FDP + P+ + + HS
Sbjct: 1236 VYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRLTMTDEEIK 1295
Query: 1129 ---YDGRAPDDLNAEVRC-------SKGHHWLHKKTI-----ADVVEALVGAFIDDSGFK 1173
D + D+ A++ S ++L ++T+ AD +EAL+G + G +
Sbjct: 1296 TGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGVCVQTVGMQ 1355
Query: 1174 AATAFLKWIGI------QVEFEASQVTNICISSK-SFLPLSASL-DMATLEILLGHQFLH 1225
+ L + G+ ++ ++ N + + + + L + + +E +LG++F
Sbjct: 1356 RSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIESILGYKFKD 1415
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
R LLQA H S+ NR+ G YQ+LEFLGDAVLD+LI+ Y++ P + PGQLTDLRS L
Sbjct: 1416 RTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSAL 1475
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-------------MITPSSTREVK 1330
VNN A + V + +++ +S S+T+N +V + ++ S R++
Sbjct: 1476 VNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLVEESDRKMA 1535
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
E PK LGD+ ES + A+ LDSG + W+++ + + I+ F+ N + +R+L E
Sbjct: 1536 EFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMGNEIMTFTENTPIQIVRQLYE 1595
Query: 1389 L 1389
Sbjct: 1596 F 1596
>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1427
Score = 221 bits (562), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 204/677 (30%), Positives = 313/677 (46%), Gaps = 72/677 (10%)
Query: 55 PKQI-ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
P Q+ AR+YQ E+ A + NII L TG GKT IAV LI + P++ + +FLAP
Sbjct: 11 PAQLEARRYQEEIFVAAQQGNIIAVLDTGSGKTFIAVQLI-KWVTAQPCPERKVVVFLAP 69
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGGSK------RLKSHCDWEKEIDQYEVLVMIPQILL 167
LV QQA I+ + + + G L W KE + +VLVM PQILL
Sbjct: 70 KRPLVMQQALFIQSQVPLNTQYYLGDMTVDDKKVELWDREQWRKEFTKRDVLVMTPQILL 129
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVV 226
L H +M I+LL+FDE HHAQ K HPY++I+K F + K P+IFGMTASP
Sbjct: 130 DLLTHAHWQMSKISLLVFDEAHHAQGK--HPYSQILKQFVSTLPVGKRPKIFGMTASP-T 186
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSP--VVRVYQ-YGPVINDTS 282
AQ K +++LE+ ++A++ +V++ + +L VS P +V +YQ Y P +T
Sbjct: 187 WDAKRAQ----KQLDALESTMNARIIAVKEHQVELSKHVSRPKELVYLYQSYDPSRRETY 242
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQS--LRNTTKQLNRLHDSMKFCLENLGVCGA 340
T + L + + D S L ++L L++LG A
Sbjct: 243 GLDDTEAAALEDAPLSPGDVPTVPGVWDVLSPLLEKDVPDFSKLKTRRDVLLDSLGPYAA 302
Query: 341 ---LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
H + L+G +L++A + + ++ + R S
Sbjct: 303 ELFAHRYFTALAG------KLLDAARKAAISATAKSLARVKRLEDLHARLAAFLSGFVPG 356
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
E+ + S K LRL+G + +H KC++FV + A L+ +L L L
Sbjct: 357 EI-PDALVSPK-LRLLGDVLCENHDEHFKCVIFVEQKHIAMTLAELLPRLSELDWVSPAA 414
Query: 458 LVGVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
L+G + + M +++ FR+ + N+L+AT V EEGLD Q C LVIRFD +
Sbjct: 415 LIGHSTTGETDIGGMDSKQQAEVVKGFRASKYNVLLATSVAEEGLDFQACHLVIRFDGLQ 474
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS 573
+ S++QSRGRAR S Y L+ + L +K E + E + R AFT +
Sbjct: 475 NLISYVQSRGRARHANSTYVVLLPRDDPLAL------TKYEGMRDAEPLLREQYAAFTAA 528
Query: 574 E-----------------ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY 616
E ++ Y V S+GA ++ + LL C+ P D++ +P Y
Sbjct: 529 ESVEPLDTDEPSAADLALQQQYVVPSTGATLTYDTAIPLLELLCASAPSDQYGVLRPS-Y 587
Query: 617 YFDDLGGTI--CHIILPANAPIHQIV------GTPQSSMEAAKKDACLKAIEDLHKLGAL 668
++LG + LP P+ + P+ S A++ A A+ +LH LG
Sbjct: 588 TVEELGEQAFRAAVALPPALPLPRAALRFDSGDEPRKSKREARRAAAFAAVAELHSLGVF 647
Query: 669 NDYLLP---QEDNATED 682
+D+LLP + D ED
Sbjct: 648 DDHLLPVNYKRDKLGED 664
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 185/425 (43%), Gaps = 56/425 (13%)
Query: 978 FSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERF 1037
S ++ LP + RL ++ A L P G E++A L++A T F
Sbjct: 921 LSSITADAVRYLPQLTRRLCDVARATAL------DLP-GIELNA--LIEATTLPPAMMGF 971
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+RLE LGDAFLK V + F EG+LT R +++N +LL A NLQ Y+
Sbjct: 972 DNQRLETLGDAFLKLGVSVYAFHAFPFKHEGQLTNVRIPSISNKSLLARARAFNLQRYLS 1031
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
+ + + PR+ + + E + ++++ +
Sbjct: 1032 ------VEVSSRRKWSPRLTNGKVE---------------------------MPRRSMQE 1058
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEI 1217
VEAL+GA G A A +G+ + + + P+ + L L
Sbjct: 1059 CVEALLGAAFASGGVPCALAVGGKLGL-----CFGPPDKLWTERYVKPVPSPLRRPLLHE 1113
Query: 1218 L---LGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
L LGH+F + LLL+A H S + Y+RLEFLGDA+LD + YL+ YP+
Sbjct: 1114 LQQRLGHEFANETLLLEAVTHRSMQSSETPSYERLEFLGDALLDMAVMQYLFKKYPQATC 1173
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV-LSETINNYVDYMITPSSTREVKEG 1332
GQL+ R V N A +A + + +++ L++ I+ +I S+ + +++G
Sbjct: 1174 GQLSWARQRAVCNSTLAWIAATRLHVHECLLQNHIELAKVIDAARQELIEMSAEQVIRDG 1233
Query: 1333 PR--CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRELLE 1388
+ PK GDLVE+ A+ +D G + + + + +L ++ +P EL+
Sbjct: 1234 WKMDMPKPPGDLVEAVFAAMFIDMGHDYERAAARICAVIRDVLVLLSPDMPRDPSTELML 1293
Query: 1389 LCNSY 1393
Y
Sbjct: 1294 YIGRY 1298
>gi|121807816|sp|Q2VF18.1|DCL2_CRYPA RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL-2; Includes: RecName:
Full=ATP-dependent helicase DCL-2
gi|77632776|gb|ABB00357.1| dicer-like protein 2 [Cryphonectria parasitica]
Length = 1451
Score = 219 bits (559), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 203/703 (28%), Positives = 318/703 (45%), Gaps = 110/703 (15%)
Query: 43 ESSVGAQKTDKD--PKQI----ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL 96
E S G + K+ PK I AR YQLE+ + +++ENII + TG GKTH+A+L I
Sbjct: 41 EDSPGGKPRPKEQLPKDIVKMDARAYQLEMLEASLKENIICAMDTGSGKTHVAILRIK-- 98
Query: 97 AHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEID 154
A L P+ + FL PTV+L QQ V++ I G+ ++ S W+ +
Sbjct: 99 AELEEMPEGQVVWFLTPTVSLCAQQYAVVKAQIPSVQTKIVTGADKVDSWSSTTWDGALL 158
Query: 155 QYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK- 213
+V++ PQ+LL L H F+ + +AL++FDE HH NH Y+++MK+FY K
Sbjct: 159 NVKVIITTPQVLLDALLHGFVNISSLALMVFDEAHHCN--KNHAYSRVMKEFYWESKTKH 216
Query: 214 --VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVR 270
VPRI G+TASPVV S S+ LE+ LDA S E+L + P +
Sbjct: 217 EPVPRILGLTASPVVRSDIS-------SLKRLESTLDAVCRSPTRHREELIANSQRPALF 269
Query: 271 VYQYGPVINDTSSSYVTCSEQLA------EIKREQYISALSRKLHDHQSLRNTTKQLNR- 323
Y P + ++ + +L I + Y+ +L ++ D +S R K +
Sbjct: 270 SIIYNPKLQPYAAGFSESLTKLMAARNKLNILEDPYVVSLRAEISD-RSRRKLEKAIKEK 328
Query: 324 ---LHDSMK-FCLENLGVC---GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQ 376
+ D+MK FC ++ + GA A + F S+
Sbjct: 329 RTYVQDTMKSFCRRSMEMAKELGAWAADW---------------------------FISE 361
Query: 377 ASEVFAAICRRDGIAS----DLSCIEVLK-------EP--------FFSKKLLRLIGILS 417
A +F A R G +S D I + + EP S+K+ R+I +L
Sbjct: 362 AIRLFLAGIYRQGASSKSFRDAEVIFLARVFQDANIEPPPPLTTHSGLSEKVQRIIEVLL 421
Query: 418 TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WR------CHFLVGVNAGLKSMSR 470
+ + + I FV T LS+IL ++S +R F+ GV +
Sbjct: 422 NY--DKDARAICFVKERATTVVLSHILTTHPEVSSKFRIGTMVGTSFVPGVKRDFLDLPE 479
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
LE FR G N+LVAT V EEG+D+ C L+I FD P + +FIQ RGRARM QS
Sbjct: 480 TGGSQCLEAFREGRKNMLVATSVLEEGIDVPACNLIICFDKPNNLRAFIQRRGRARMRQS 539
Query: 531 EYAFLVDSGNQRELDLIKNFSK----EEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
V+ + + + ++ K +E R + + +S+A EE +V+S+GA
Sbjct: 540 HLYLFVEDEAEADWEALEAQMKLQYEDEKREHERLEAIENSEALDYPEE--LRVESTGAR 597
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKF--------YYFDDLGGTICHIILPANAP--I 636
++ S L + S L +F +P + Y D ++LP + P +
Sbjct: 598 LTINDAKSHLQHFVSTLASRKFVQTQPDYLIEKVSQGYQPGDQPLLKATVLLPVSVPQAL 657
Query: 637 HQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN 678
Q+ + S + A DA +A + L++ G ++D+LLP D
Sbjct: 658 RQVTSSRTWVSEKNACMDAAFQAYKALYEAGLVDDHLLPLRDR 700
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 30/321 (9%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PS++ E LVA EL + A + VS ML++A+ + + + ER+E LGD
Sbjct: 954 LMPSLVCYTELYLVAAELSRKVLAPL-RISNVS--MLVEAICAKSARTPENYERIEFLGD 1010
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK + +L + EG L+ + V+N+ L + A L ++ Q Q
Sbjct: 1011 SILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVTQ-----QLV 1065
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG-AF 1166
G + P + DL + + + L KT+ADVVEAL+G +F
Sbjct: 1066 TKGWQPPYM------------------SDLAKQDQEPESKRILSPKTLADVVEALIGVSF 1107
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
+D KA +I S+V +I + + D+ LE L+ + F +
Sbjct: 1108 VDGGLPKALECIRLFIPESQPRPFSEVRDILFGAAEPKGMKLPADLQLLEQLIEYSFCEK 1167
Query: 1227 GLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LL++A HPS+N G CY RLEF+GDA+LDY+I ++++ P L+ Q+ LR+ LV
Sbjct: 1168 ALLVEAVTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEPALENWQMHLLRTALV 1227
Query: 1285 NNQAFANVAVDQSFYKFLIFD 1305
N + ++ S YK + F+
Sbjct: 1228 NADILGFLIMEWS-YKQMGFE 1247
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+R+EFLGD++L IT L + L G L+ ++ LV+N A D +FL+
Sbjct: 1002 YERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVT 1061
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGF 1356
V T YM + + E R PK L D+VE+ +G +D G
Sbjct: 1062 QQLV---TKGWQPPYMSDLAKQDQEPESKRILSPKTLADVVEALIGVSFVDGGL 1112
>gi|413933740|gb|AFW68291.1| hypothetical protein ZEAMMB73_565304 [Zea mays]
Length = 462
Score = 219 bits (559), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 244/478 (51%), Gaps = 39/478 (8%)
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
S S +PSIM+R++ LL++ +LK L + ++A +L+ALTT++CQE+FS+E LE
Sbjct: 11 SFSFVPSIMYRIQCLLLSAKLKIQLGPRMQQ-FNITAMKILEALTTKECQEKFSMESLET 69
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+F+KY G++LF + E LT R V+N L +LA ++ + YIR + F+P
Sbjct: 70 LGDSFIKYVTGQNLFNKYKH-REDMLTSMREEKVSNPALCQLACKSEIVGYIRGELFNPQ 128
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KTIADVV 1159
++ G YD R + + R + + L K K IAD V
Sbjct: 129 KWTIPG----------------FGYDSRGNNKVF--FRATNNMYSLKKISIKSKRIADTV 170
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
EAL GA++ G AA F+K +G+ VE + I++KS +D +L+ +L
Sbjct: 171 EALTGAYLSTCGELAAVHFIKALGMDVELHSKMQVERTITTKS----EELIDAESLQTML 226
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
+ F LL++A H S+N G C +RLEFLGDAVLDY++T Y Y YP P LT
Sbjct: 227 KYVFYDTSLLVEALTHSSYNITGITACNERLEFLGDAVLDYILTYYFYRKYPNCTPALLT 286
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSN-VLSETINNYVDYMITPSSTREVKEGPRCP 1336
+LR VNN +A+ AV +K ++ S+ + + N PS E G P
Sbjct: 287 NLRKASVNNCCYAHAAVKAGLHKHILHSSSKQMVNDLENSGRSFSGPSHGWEA--GISLP 344
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELC--NSYD 1394
+ L DL E+ GAI +DSG + VW + L+P+ ++ +P+ EL ELC Y
Sbjct: 345 EDLADLFEAIAGAIYVDSGNDKEVVWSAIRRLLEPLATPGTMEPDPVSELKELCEHKHYP 404
Query: 1395 LDLQFPSLKK-GGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
P+ G A+VT + V+ S T ++ A +A++ L K+KAA
Sbjct: 405 KPSYSPTRDSVAGVTRVVAQVTAA-RTVY-SGTGTGRNQDVAEVLAAKALLKKIKAAA 460
>gi|242033789|ref|XP_002464289.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
gi|241918143|gb|EER91287.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
Length = 462
Score = 219 bits (559), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 221/410 (53%), Gaps = 26/410 (6%)
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
S S +PSIM+R++ LL++ +LK L + ++A +L+ALTT++CQE+FSLE LE
Sbjct: 11 SFSFVPSIMYRIQCLLLSAKLKVQLGPRMQQ-FNITAMKILEALTTKECQEKFSLESLET 69
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+FLKY G+ LF + T E LT R V+N L +LA ++ + YIR + F P
Sbjct: 70 LGDSFLKYVTGQDLFSKY-TYREDMLTSMRGEKVSNPALCQLACKSEIVGYIRGELFSPK 128
Query: 1105 QFFALGRRC-PRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALV 1163
++ G R +K RT + Y + D++ + K IAD VEAL
Sbjct: 129 KWTIPGLGYDTRGNNKVLFRTTNDMY---SLDEIP-----------IKSKRIADTVEALT 174
Query: 1164 GAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQF 1223
GA++ G AA F+K +G+ VE + +S+KS +D+ +L+ ++G+ F
Sbjct: 175 GAYLSACGELAAVHFIKSLGMDVELHSKMQVERIVSTKS----EEFIDVESLQTIIGYVF 230
Query: 1224 LHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLY-SVYPKLKPGQLTDLR 1280
LL++A H S+N G C +RLEFLGDAVLDY++T Y Y YPK P LT+LR
Sbjct: 231 DDSSLLIEALTHSSYNTAGITTCNERLEFLGDAVLDYILTDYFYRKYYPKCTPALLTNLR 290
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLG 1340
VNN +A+ AV +K ++ S+ + I + + + G P+ L
Sbjct: 291 KASVNNWCYAHAAVKAGLHKHILHSSS--KQMIKDLESSGPFSGPSHGWEPGIGLPEDLA 348
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELC 1390
DL E+ GAI +DSG + VW+ M L P+ + L+P+ EL ELC
Sbjct: 349 DLFEAIAGAIYVDSGNDKEAVWRAMRRLLVPLATPETILLDPVSELKELC 398
>gi|371486408|gb|AEX31249.1| Dicer 2 [Aedes albopictus]
Length = 1625
Score = 219 bits (559), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 245/1004 (24%), Positives = 442/1004 (44%), Gaps = 111/1004 (11%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+ R YQ + M++N I+YL TG GKTHIA++ I E+ + KP F+ T
Sbjct: 12 VPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNT 71
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
VAL +QQA+ + ++ + + D W E +++V+V QILL L H
Sbjct: 72 VALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHG 131
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++ ++ I LLIFDECHH HP IM+ F + PR+ G++ + + +
Sbjct: 132 YLSIKHINLLIFDECHHG--VGEHPMHGIMEQFLRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLES---FVSSPVVRVYQY-----GPVINDTSSSY 285
P+ + LEN ++ + +V + F ++P + Y PV+ D S
Sbjct: 190 QVSPE-LERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSLRLSPVMVDIVRSI 248
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
S+ + + +Y++ + D K++ +L + + L + G+ G A
Sbjct: 249 EAFSQTINDFHLPKYLNQNKALMKDRPK---PLKEIKKLFTELVYQLGDTGLFGCSIALL 305
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DGIASDLSCIEVLKEP 403
L+ E + D S+ R A ++ F R + + S L E L
Sbjct: 306 GLIVQ--------FELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTR- 356
Query: 404 FFSKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH---- 456
F S K+ +LI L + K +VFV R +A+ L ++L+ + F +
Sbjct: 357 FSSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLK-IYFSQTEDADLILP 415
Query: 457 -FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
F+VG N + + +S + ++E+F+ E N++V T V EEG+D+Q C VI++D
Sbjct: 416 DFMVGSNGSMPESIEQILSAKKDRRVIERFKRNETNVIVTTNVLEEGIDLQMCNTVIKYD 475
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDS-GNQRELDLIKNFSKEEDRMNREIMDRTSS-- 567
P+T AS+ QS+GRARM S+Y ++++ Q+ L+ + + E + R ++ +T +
Sbjct: 476 HPQTFASYQQSKGRARMKDSQYMVMLNNEERQKFLEKYRLYKSIEQELQRCLIGKTINRP 535
Query: 568 ---DAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
DA E +Y + GA + A V LL+RYC +P D F N +
Sbjct: 536 DPLDADVHKE--LYNEIIPPFFTAKGAKLDALSAVQLLNRYCMGMPRDAFTNTNVTWERV 593
Query: 619 DDLGGTI-CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQE 676
D G I ++LP + + + I+G P +++ AK+ A A L++ L+++L+P +
Sbjct: 594 DLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIPID 653
Query: 677 --DNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIP 734
+ + + F +D E G + + + +YP + F P
Sbjct: 654 CRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAI-------EYPKQTTGCF----P 702
Query: 735 DPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ----FQEMF 790
+P Y + L + + + + V++ S+ GIM + ++
Sbjct: 703 EPGKPCYI-YVLRIGAGFEQDPSNENVNIF----HSLYNSENNFGIMTTKPLPVLLRQFH 757
Query: 791 LKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR--RCLSSPVFG 848
+ V D +F+ D+ S ++++P + +DW++IR + LS P
Sbjct: 758 ITVFRDVLRLWKDFLVYDYDNGINS-----FMVVP-LKKSTHLDWELIRQFQYLSEP--- 808
Query: 849 TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLV----YATHKKWFYLVTNIVFEKNGYS 904
PS + E+D V Y +K+ Y+VT + S
Sbjct: 809 -----------PSEMSTMARSRMDFEADNYRHKVILPWYKNNKEQPYVVTMVHEHLTPGS 857
Query: 905 PYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEY-F 963
P+ +++ S+ ++ +Y + + P Q L+ K + N L+ +D +S + + F
Sbjct: 858 PFPNAEYGSYANYFSEAYHLAVVKPDQFLIEVKGITSYLNRLNPGVEDDGKSTRSKHWRF 917
Query: 964 DD-LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
++ L PELC F D +LLPS +HR+ LL+A +++
Sbjct: 918 NEILIPELCH--NYQFPADYWLKATLLPSALHRIHYLLLAEKIR 959
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 55/421 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+LKA+TT+ + F LER E+LGDAFLK+A +L H EG LT + V+N NL
Sbjct: 1142 ILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEWHEGFLTAVKGQIVSNRNL 1201
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG-RRCPRICSKETERTIHSQ-------------- 1128
+ A + L ++ FDP + P+ + + HS
Sbjct: 1202 VYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAVNHSARVLYRLTMTDEEIK 1261
Query: 1129 ---YDGRAPDDLNAEVRC-------SKGHHWLHKKTI-----ADVVEALVGAFIDDSGFK 1173
D + D+ A++ S ++L ++T+ AD +EAL+G + G +
Sbjct: 1262 TGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTPADAMEALLGVCVQTVGIQ 1321
Query: 1174 AATAFLKWIGI------QVEFEASQVTNICISSK-SFLPLSASL-DMATLEILLGHQFLH 1225
+ L + G+ ++ ++ N + + + + L + + +E +LG++F
Sbjct: 1322 RSFKLLPYFGMLPKTHDVLKLLDEKIENQRLRTHIDYREVDGFLKNHSRIESILGYKFKD 1381
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
R LLQA H S+ NR+ G YQ+LEFLGDAVLD+LI+ Y++ P + PGQLTDLRS L
Sbjct: 1382 RTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSAL 1441
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-------------MITPSSTREVK 1330
VNN A + V + +++ +S S+T+N +V + ++ S R++
Sbjct: 1442 VNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQNKHEITDQVNLLVEESDRKMA 1501
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
E PK LGD+ ES + A+ LDSG + W+++ + + I+ F+ N + +R+L E
Sbjct: 1502 EFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGIMGNEIMTFTENTPIQIVRQLYE 1561
Query: 1389 L 1389
Sbjct: 1562 F 1562
>gi|413918885|gb|AFW58817.1| hypothetical protein ZEAMMB73_714278 [Zea mays]
Length = 306
Score = 219 bits (558), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 172/301 (57%), Gaps = 40/301 (13%)
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELC--NSYD 1394
+VLGD+VES +GA+LLDSGFNLN VWK+ML L PIL F + ++P+REL E C N +D
Sbjct: 2 QVLGDIVESCVGAVLLDSGFNLNHVWKLMLMLLKPILSFCGMHIDPMRELRETCQYNGFD 61
Query: 1395 LDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVP 1454
L L P+ K G+F + +V K IS A N + K+A ++A+Q+ SKLK GY
Sbjct: 62 LGLPEPT-KYNGEFHVKVEVNINGK--MISCTAANRNSKDARKVAAQETLSKLKNYGYKH 118
Query: 1455 KTKSLESILKSSPKSEARLIGYDETPINV---------------------VAADDNVFEK 1493
K KSLE IL+S+ K E+ LIGYDE PINV A DN +K
Sbjct: 119 KRKSLEEILRSTTKKESELIGYDEEPINVEDDIDMQMNNLLINGERTSIQSTAGDNKVDK 178
Query: 1494 LKISEPQGGSS-------------CDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTF 1540
+ + S D + G + ++ARS LYELCAAN WKPP F
Sbjct: 179 NDANSGRNNKSNVVMQNGCLPRGATDKINQKEYHGDMVRKTARSFLYELCAANYWKPPEF 238
Query: 1541 DCCKEEGLSHLKLFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGY 1599
+ C +EG SHL+ FT +V++EI ++EC +P+ +K+ A EHAAEG LW L+ GY
Sbjct: 239 ELCNDEGPSHLRKFTCKVLIEITGTSVSLLECYSDPKLQKRAAQEHAAEGALWYLKHLGY 298
Query: 1600 L 1600
L
Sbjct: 299 L 299
>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1430
Score = 218 bits (556), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 207/681 (30%), Positives = 313/681 (45%), Gaps = 95/681 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
RKYQ E+ ++A +EN+I L TG GKT I +LLI ++ L K I IFL P VALV+
Sbjct: 17 RKYQEEIFERAQKENVITALNTGSGKTLIGLLLIKWMSALESSGDKLI-IFLVPRVALVE 75
Query: 120 QQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQAK + ++ + G L W+K++ + +V+VM PQIL+ + H +
Sbjct: 76 QQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTPQILVNFITHSIWSLR 135
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
IALL+FDECHHA + NHPY IM++ FY ++ P+IFGMTASPV
Sbjct: 136 QIALLVFDECHHA--RKNHPYNIIMQEYFYIKEVEDRPKIFGMTASPVWNTKDPV----- 188
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSP----VVRVYQYGPVINDTSSSYVTCSEQLA 293
S+ +LE LD+ + SV + D E V +P ++ ++ P D V
Sbjct: 189 GSLLTLETNLDSVIISVREHVD-ELAVHTPRPSELITIFPAPPDNYDFHDPNVL------ 241
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYILLSGDE 352
+ +S +S +H L L HD+ L NLG C +L ++ L
Sbjct: 242 -----RCLSIISPATWEH--LEVAWPSLVMRHDA---TLYNLGPYCASL---FLYLEVRH 288
Query: 353 TMRNELIEAEGNTIDDS---LCRFASQASEV-----------------FAAICRRDGIAS 392
+++ ++ TI+D+ + + + AS F R+ +
Sbjct: 289 VLKS--VQTGLRTIEDTKMEVVEYVAGASAPKRNPPEELNLIRDILLDFEGFFWRNDCPN 346
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL-A 451
+ LK + S K+ L IL F + + IVFV + A LS IL + L
Sbjct: 347 RVPIPVPLK--WCSPKVDALKHILLEF-YTPNFQVIVFVEQRQVAACLSKILPVIPGLEG 403
Query: 452 SWRCHFLV--GVNA-GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
R LV GVN+ G+ + ++ FR GE+N+L+AT V EEGLD C LV+R
Sbjct: 404 KIRSAHLVGQGVNSDGVSKATDTYHGDAIQAFRKGEVNVLIATSVAEEGLDFPACDLVVR 463
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD 568
FD + ++QSRGRAR S + ++ +Q + +N +E MN+ R +
Sbjct: 464 FDPFRHMVGYVQSRGRARNADSRFIVMIRQDDQVSFEFYQNLLAQEPEMNKAYQGRQRA- 522
Query: 569 AFT-------------------CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
A T S ER Y V S+ A +S + LL+ C+ +P D +
Sbjct: 523 AVTMPAQQEDEDEEDDLNPLDLASRER-YVVPSTEAVLSYDSAIGLLNYLCALIPCDAYT 581
Query: 610 NP-KPKFYYFDDLGGTICHIILPANAPIH----QIVGTPQSSMEAAKKDACLKAIEDLHK 664
P KPKF G + LP + P+ G + S + AK+ A++ LH+
Sbjct: 582 PPHKPKF-----TGDFQSTVQLPLSIPLPPDQLTYTGPLKCSKKEAKRAVSFLAVKRLHE 636
Query: 665 LGALNDYLLPQEDNATEDEPM 685
L + YLLP + +E M
Sbjct: 637 LDIFDQYLLPTPGSTLGEEEM 657
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 195/425 (45%), Gaps = 38/425 (8%)
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQE 1035
+ S D+ + +LP++ H++ + A + + F + ++L++ALT
Sbjct: 924 VDMSPDVIRAFEILPTLCHKITDAYRAQSTRLNIGLPF-----IPDDLLMEALTLPNVDA 978
Query: 1036 RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
FS +RLE LGDA L HL + EG+L+ R+ V+N L+ A L+ +
Sbjct: 979 DFSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSNKFLVSCARTVELERF 1038
Query: 1096 IRDQPFDPCQFFALG-RRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG-HHWLHKK 1153
I + +G + P + K E E+R K + ++
Sbjct: 1039 ISSE--------KMGVEKWPFVEQKGYE---------------AKEIRDRKSVKRQIPRR 1075
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMA 1213
+ D VEAL+GA G A G+ F Q + +A
Sbjct: 1076 GLQDCVEALLGASFLAGGIPMALRTGVCFGLS--FGGIQPWGERCRRAEAREIGVPALVA 1133
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
LE +G+ F + LL++A HPS YQRLEFLGD+V+ L+T YL+ +PK
Sbjct: 1134 GLEKEIGYVFENPELLVEAVTHPSLEFSSTPSYQRLEFLGDSVIKMLVTEYLFHKFPKAT 1193
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
QL R+ + + A A++A+ + +K+L+ +S L+ IN YV + + ++ V+
Sbjct: 1194 SHQLALPRTKAICSPALAHIAIRKIHIHKYLLQNSIDLNNAINLYVPVLESATADEIVRR 1253
Query: 1332 GPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELL 1387
G R PK + D ES +GA+ +D G++L+ I+ ++ IL+ N + +P+ E+L
Sbjct: 1254 GWRYDPPKAISDAFESVVGAVFVDVGYDLDRTGGIVCRLMEDILEVLNPSIPKDPVSEVL 1313
Query: 1388 ELCNS 1392
E S
Sbjct: 1314 EWLAS 1318
>gi|357607884|gb|EHJ65725.1| dicer-2 [Danaus plexippus]
Length = 1871
Score = 218 bits (556), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 207/712 (29%), Positives = 341/712 (47%), Gaps = 81/712 (11%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIF 110
D + + R YQ +L + A+++N I++L TG GKTHIA+ LI L ++KP C F
Sbjct: 199 DDEILPRLYQTQLEEIAVKKNTIIFLPTGSGKTHIAISLIKRLRDTLQKPWGFGGKRCFF 258
Query: 111 LAPTVALVQQQAKVIEESIGFK-VRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLY 168
L TV LV QQ K IE S V F G + W+ E+ +Y+V+VM QIL
Sbjct: 259 LVNTVPLVAQQKKTIERSCPVHGVAGFSGEDNVDYWNKAQWDSELSKYQVIVMTCQILSD 318
Query: 169 CLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGK 228
L H++++++ I+LLIFDECHH +HP IMK F + PR+ G+TA+ +
Sbjct: 319 MLTHQYLQLKDISLLIFDECHHGV--EDHPMRLIMKHFLNCPKNEQPRVLGLTATLL--- 373
Query: 229 GASAQAN-LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYG-PVINDTSSSYV 286
++ + N + ++I LE A + + +D ++ + ++P ++ Y P +S V
Sbjct: 374 NSNVKLNKIQETIRHLETTFQASIATADDMGEVAMYSTNPREQLLYYRRPSATPAASEAV 433
Query: 287 TCSEQLAEIKREQYISALSRK----LHDHQ-----SLRNTTKQLNRLHDSMKFCLENLGV 337
+L +I + + +K L HQ + K + + +SM + +LGV
Sbjct: 434 DLLRRLQQIVLQFELPNTVQKHDIELEPHQRDITGDPKKIIKAVKNMIESMILSICDLGV 493
Query: 338 -CGALH--ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
GAL A+ + L + + +E L + + V A D + ++
Sbjct: 494 YVGALGLLANIVALERRKRWASSQVE--------ELLYTVTITAAVEARSVLLDSMKNES 545
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNR---------IVTARALSYILQ 445
++++ S+K ++L+ IL + + ++ + VN+ + R + IL
Sbjct: 546 GYEKIIRHS--SEKTVQLLNILKEYNPRTPVRRALKVNQERNALCGLILTQQRFTAKILY 603
Query: 446 NL---------KFLASWRCHFLVGVNAGL------KSMSRNAMKSILEKFRSGELNLLVA 490
NL + + F+VG N + ++ + L KF++G+LN L+A
Sbjct: 604 NLLKDVAEVNKEEFGFLKHDFIVGFNISPLCSTREQHYNKKISEQALLKFKNGDLNCLIA 663
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD-LIKN 549
T V EEGLD+ C LV+R+D+P S+IQS+GRAR ++ + LVD N+++ + +
Sbjct: 664 TSVVEEGLDVPQCTLVLRYDVPLEYRSYIQSKGRARNKKANFVILVDEENRQKFNSQYRA 723
Query: 550 FSKEEDRMNREI----MDRTSSDAFTCSEERIYKVD-------SSGACISAGYGVSLLHR 598
F + E +N + + T S+A +E + D +G + A +SLL+R
Sbjct: 724 FQQVESYLNGMLCGGEVRNTPSEAEV--KENLNDDDCIPAYKTRNGNSLFAVSAISLLNR 781
Query: 599 YCSKLPHDEFFNPKPKFYYFDDLGG-TICHIILPANAPIHQIV-GTPQSSMEAAKKDACL 656
YCS LPHD++ P G T+ II+P PI + V G P SS++ AK+ A L
Sbjct: 782 YCSVLPHDQYTTILPMVIQEPAQGNKTMVTIIMPIACPIKEPVQGRPMSSVKNAKRSAAL 841
Query: 657 KAIEDLHKLGALN-DYLLPQE----DNATEDEPMLFSSDSDSYE--GEGSRG 701
LHK G L+ + LLP+ D +T D F + D E EG G
Sbjct: 842 NVCIKLHKAGELDYETLLPKVKGLIDFSTTDVSSCFPNWRDETEVSDEGPPG 893
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 217/475 (45%), Gaps = 79/475 (16%)
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
S +LLP + + + V L +AS P G E +L ALT K + F+LER E
Sbjct: 1353 STALLPPPLRYKDTISV------LSTASSPRGPE--PREVLSALTLIKSNDTFNLERSET 1404
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP- 1103
LGD+FLK+A +LF +DEG+LT +S + N NL R L ++ + F P
Sbjct: 1405 LGDSFLKFAASLYLFHKFPQMDEGQLTNLKSRLIGNRNLYYAGERAGLAGRMKVEQFSPR 1464
Query: 1104 CQFFALGRRCP-RICSKETERTIHSQY-------------DGRAPD------------DL 1137
F G P + S T R I + +P+ DL
Sbjct: 1465 SDFLVPGFLAPSELVSFITRRKIRPTFLIGVQFPVEDALSGNLSPESRSLLQEKLKDSDL 1524
Query: 1138 NAEVRCSKGHHWLHK---------KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ--- 1185
E K + + + K++AD VEAL+G ++ G A + L+W I
Sbjct: 1525 AEEEPFGKAQNAMQRYVGAQAVSDKSVADCVEALIGTYLLSGGITDAVSILEWFKIIPSE 1584
Query: 1186 ---VEFEASQVTNICISSKS------FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHP 1236
+ F +V + K+ +L S D +E +LG++F LLL+A H
Sbjct: 1585 DKFLSFLTKKVNTVISEGKATVQEVDWLLNSCRSD---IETILGYKFKDPSLLLEALSHA 1641
Query: 1237 SF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
S+ NR Y+RLEFLGDA+LD+LIT+Y+Y L PG LTDLRS LVNN FA+ V
Sbjct: 1642 SYIRNRYTRSYERLEFLGDAILDFLITAYIYENCGDLSPGDLTDLRSALVNNVTFASYVV 1701
Query: 1295 DQSFYKFLIFDSN-VLSETINNYVD--------------YMITPSSTREVKEGPRCPKVL 1339
+K+ N VL I +V+ Y+I + + PK L
Sbjct: 1702 RLGLHKYFCSQFNGVLENAIKTFVEHQEQLDHVLLEDVLYLIEEEDC-NIAQYIDVPKAL 1760
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLELCNS 1392
D+ ES GA+ LDSG +L VWK++ + I FS + P+R L+E+ ++
Sbjct: 1761 SDIFESLTGAMFLDSGGDLKLVWKVIYRIMHKEIHDFSMKVPKQPVRVLMEMIHA 1815
>gi|408399323|gb|EKJ78431.1| hypothetical protein FPSE_01388 [Fusarium pseudograminearum CS3096]
Length = 1860
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 302/635 (47%), Gaps = 78/635 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A EN IV L TG GKT IA LL+ EL K + F+
Sbjct: 440 REYQIELFERAKRENTIVVLPTGSGKTLIAALLLRHCLEQELEDRAAGKPKRVAFFVVEK 499
Query: 115 VALVQQQAKVIEESIG-FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
VAL QQ V+ ++G + V F G K+ W K+ +V QILL CL
Sbjct: 500 VALCFQQFAVLNCNLGAYPVTKFWGKMSGTKTKDYWNKQFSDNMAIVCTAQILLDCLNSN 559
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
FI M I LL+FDE HHA K HPYA+I+K+ Y PRI GMTASPV
Sbjct: 560 FINMSQINLLVFDEVHHA--KKEHPYARIIKNHYVHHEGDKPRILGMTASPV-------- 609
Query: 234 ANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
DA+ E A ++E+F+ S + V D ++ + +QL
Sbjct: 610 --------------DAQTKDFEGTAVEIETFLCSKI------ATVSGDVLANSMDLRKQL 649
Query: 293 AEIKREQYISALSRKLHDHQSLRN-TTKQLNRLHD-----SMKFCLENLGVCGALHAS-- 344
E + Y AL +LR Q+ LH+ S++F E G+ A
Sbjct: 650 QE---KAYYDALRFPEESKTALRELIVGQI--LHNALFKASLEFTEEASSTLGSWCADRY 704
Query: 345 -YILLSGDETMRNELIEAEGNTIDDSLCRFAS-QASEVFAAICR-RDGIASDLSCIEVLK 401
++L++ DETM + T + FAS +A A+ R RD + +++ I
Sbjct: 705 WHLLITEDETM-----QLAAKTDREFAKSFASIKADGATDAVRRVRDIVKNNVLGIVRPS 759
Query: 402 EPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLV 459
P S K+ +L IL + F +CIVFV + TA LS + Q + + +++
Sbjct: 760 SPGLSVKVKKLHEILLNAFTFNGTKRCIVFVEKRYTACLLSDLYQQPEMGIRGMNASYMI 819
Query: 460 GVNAGLKSMSRNAMKS---ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
G + + ++ + + L++F+ G++N L AT V EEG+DI C LV+RFDL +V
Sbjct: 820 GRQSSISNIGGMSFRDQVITLQRFKRGDVNCLFATPVAEEGIDIPDCDLVVRFDLFNSVI 879
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM----DRT----SSD 568
++QSRGRAR +S+Y +++ GN +++ +K ++ + + IM DR S D
Sbjct: 880 QYLQSRGRARQQRSKYITMLEHGNSKQIRSLKQAERDAASLEKFIMSLPSDRKLQDESMD 939
Query: 569 AFTCSE-----ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG 623
T ++ +++Y + S+GA ++ + +L ++ S L + N +F
Sbjct: 940 PVTATQNELTTQKVYVMPSTGARLTFSISLGVLAKFTSSLSSSD--NGNLEFVVSKQGPT 997
Query: 624 TICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
I +ILP ++P+ + G PQ S AK A +A
Sbjct: 998 FIADVILPDSSPLRSMSGIPQRSKALAKCSAAFEA 1032
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 216/481 (44%), Gaps = 79/481 (16%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+++A+ L RNLL + +++ + ++ F L P L++ D+ P
Sbjct: 1294 QPVVKAELLSLRRNLLDEFQTDENLN---KDCFVILEP----LRVSPIPIDVVFMTMTFP 1346
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKC--------QERF----- 1037
+I++R+E++L+A++ L + P + L+ALT + Q F
Sbjct: 1347 AIINRIESILIALDACASLDLTIPPA------LALQALTKDGGGTGDLDVKQSNFQPGMG 1400
Query: 1038 -SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+ ERLE LGD+FLK A LF L +E R + N NL +NL YI
Sbjct: 1401 DNYERLEFLGDSFLKMATTISLFTLIPESNECGYHAERVLLICNQNLFNHGVEHNLHQYI 1460
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R + FD ++ P K T+ T+ H L KTIA
Sbjct: 1461 RSKSFDRRAWYP---DLPLKKGKVTKTTMT---------------------HDLADKTIA 1496
Query: 1157 DVVEALVGA-FID------DSGFKAATAFLKWIGIQVEFEASQVTNICI----SSKSFLP 1205
DV EAL+GA ++ D G KA T +K ++EF + ++KS
Sbjct: 1497 DVCEALIGAAYLSGEEGNMDMGVKAVTRMVKSKNHEMEFFRDYFAAFKVPPWHTAKSTTL 1556
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYL 1264
+D + + G++F LL F HPS+ YQRLEFLGDA+LD ++ +L
Sbjct: 1557 QRRLVD--CVAKVTGYRFNSSALLQSVFKHPSWPYEAVPDYQRLEFLGDALLDMVVVDFL 1614
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-DYMITP 1323
Y + P LT+ + +V+NQ + V + +K L+F ++ L+ I+ YV + +
Sbjct: 1615 YKRFKLADPQWLTEHKMAMVSNQFLGCLCVQLNLHKHLLFTTSSLTGQISEYVAELELAK 1674
Query: 1324 SSTREVKEGPRC-------------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD 1370
+V + R PKVL D+ E+ +GA+ +D+ +N + V + F++
Sbjct: 1675 EDAHKVAKANRTPTRMDFWLHASLPPKVLADVAEALIGAMFVDAKYNYSVVNQFFTRFVE 1734
Query: 1371 P 1371
P
Sbjct: 1735 P 1735
>gi|409076508|gb|EKM76879.1| hypothetical protein AGABI1DRAFT_77978 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1528
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 202/709 (28%), Positives = 323/709 (45%), Gaps = 125/709 (17%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ +++++ NII+ + TG GKTHIAVL I H + + F APTVAL
Sbjct: 15 TRGYQQEMLEESIKHNIIIAMDTGSGKTHIAVLRI---KHEVEREPSKAAWFFAPTVALC 71
Query: 119 QQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ VI+ + V G + KS WE+ ++ + V+V PQ+ L L H +I
Sbjct: 72 AQQKAVIQTHLPVSVGLVSGALEPDQWKSAELWERVLNTHRVIVSTPQVFLDALRHAYID 131
Query: 177 M-ELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKV--------PRIFGMTA 222
+ + I+LL+FDE HHA +HPYA+IM DFY +P +++ P + G+TA
Sbjct: 132 LGKDISLLVFDEAHHAT--GDHPYARIM-DFYHRIEERPANLRLYGISQVSRPYVLGLTA 188
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSPVVRVYQYGPVINDT 281
SP+ G ++ KS N LE LD + + +L FV P+ + Y +
Sbjct: 189 SPIYG------GDVVKSFNMLEKNLDCIIRAPRRTRAELAQFVHRPIFQHVMYEQWPDAP 242
Query: 282 SSSYVTCSEQLA---EIKREQYISALSRKLHDHQSLRNTTKQLNR--------------- 323
S+ +T + +I+++ Y+ +L +KL + L + +L++
Sbjct: 243 FSTNLTVISNIVRSLQIEKDPYVISLRQKLATAKPLTSEYFRLDQKLSITIRTQKTFVFK 302
Query: 324 -LHDSMKFCLENLGVCGALHASYILLSGDETMR------NELIEAEGNTIDDSLCRFASQ 376
L D + + L G A + + E R N ++ + +T L +
Sbjct: 303 GLRDFERAASDILLDLGPWAADWYVWRIAEKAREAANPFNNIMASWKDTEKSHLLKLLDS 362
Query: 377 ASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK-----CIVFV 431
A V + + D+ C S KL RLI L +++ + +VFV
Sbjct: 363 A--VLTPVSYGE---EDIMCD-------CSDKLQRLIETLLNEKMETEKRDEVYSGLVFV 410
Query: 432 NRIVTARALSYILQNLKFLAS-WRCHFLVGVNAG---------LKSMSRNAMKSILEKFR 481
R T AL+ +L N F + +R FL+G + + ++R + + +FR
Sbjct: 411 QRRDTVIALAEVLNNHPFTKNIFRIGFLLGTSDSSRRHSFLDISRKLARETQEETMAEFR 470
Query: 482 SGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ 541
SG+LNL++AT V EEG+DIQ C VIR+DLP+ +AS+ QSRGRAR +S + + +G+Q
Sbjct: 471 SGDLNLIIATAVAEEGIDIQACGSVIRWDLPQNMASWAQSRGRARKRRSTFTLMFANGSQ 530
Query: 542 RELDLIKNFSKEEDRM--------------NREIMDRTSSDAFTCSEERIYKVDSSGACI 587
E + ++ + E RM N +MD T D + I+ V+S+ A
Sbjct: 531 DEQN-VRKWELLERRMVELYNDPARDLAMENESLMD-TDDDV-----DEIFFVESTRAST 583
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC-HI------ILPANAPIHQIV 640
S +S L +C+ +P + +P Y D + H +LP N P V
Sbjct: 584 SVHSAISHLAHFCAVIPIRAHVDIRP-IYEIDPPDMPLAWHADPHRSNLLPYNGPWGSKV 642
Query: 641 GTPQ---------------SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
P+ SS +A + +A L+K G LN+ LLP
Sbjct: 643 ILPRCLPLACREFSVPMKYSSKVSAHRHVAFEAYVGLYKAGLLNENLLP 691
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 253/597 (42%), Gaps = 92/597 (15%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
PLL KP N L K D S E + L PE + +I S ++ + LLPS
Sbjct: 925 PLLVVKPFHPRCNFLIPTKPRDPGSSAPEIKYVYLMPEFTGITLIS-STEVEYAF-LLPS 982
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
++ LE L L+ L P ++ +L A+T E+++ +RLE LGD LK
Sbjct: 983 VLRSLEINLTMASLRSNLFMPSPSLQDIPLALLSNAMTASSAGEKYNYQRLETLGDTVLK 1042
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
+ V + + + EG LT+++ + V N +L K + L +I + LGR
Sbjct: 1043 FLVALQVLVEYPLWHEGYLTKKKDHTVANVSLAKENINHRLYRWI-------IKEIMLGR 1095
Query: 1112 RC-PRICSKETERTIHSQYDGRAPD-----DLNAEVRCSKG---------HHWLHKKTIA 1156
+ PR +K T + + D AE+ SKG + L K +A
Sbjct: 1096 KWRPRYSTKLLPPTTPLSEEKIVEELLMVVDEGAEL-SSKGAARKKKNSKNQGLSTKILA 1154
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVTNICISSKSFLPLSASLDMAT 1214
DVVE+L+GA GF K G+ + + ++ + + + + ++L
Sbjct: 1155 DVVESLIGAAYIHGGFPLGYECTKLFGLGLRWLPPPERIKDFLGAVEPDKNIPSAL--YY 1212
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPK-L 1271
+E +LG+ F H+ LLL+A H S+ + Y+R+EFLGD+VLD ++T YLY K
Sbjct: 1213 VEKMLGYTFKHKVLLLEALTHASYQQDARTVSYERMEFLGDSVLDMVVTDYLYHAPDKNY 1272
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKF-------------LIFD------------- 1305
PG + RS +VN A + + S KF L+ D
Sbjct: 1273 SPGHIHLRRSSVVNTHFLAYICLKTSV-KFDALMPRADDEGIELLADAQEVMLWQCLLHS 1331
Query: 1306 -SNVLSETINNYVDYMITPSSTREVKEG-------P-------RCPKVLGDLVESSLGAI 1350
S ++ + N + + E++EG P + PK D++ES LGA+
Sbjct: 1332 SSRIMDDQANTHTRFK---KRREEIEEGLMNDTIFPWAALTRLQAPKFFSDIIESVLGAV 1388
Query: 1351 LLDSGFNLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKG 1405
LDS ++ T + +L L+ I+ + +P+ + + + ++ L + K+
Sbjct: 1389 YLDSNGDIGTARDVITKLGILPTLERIVHDNVDVWHPVSRISQWASKHEKKLGWQFEKER 1448
Query: 1406 GKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESI 1462
G V G+ + ACA + R AS Q KL AA ++ L +
Sbjct: 1449 GVVKCSVLVDGE-----VEACAMD-----DYRGASTQDEVKLIAAENASRSLRLRRV 1495
>gi|391332351|ref|XP_003740599.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1610
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 295/670 (44%), Gaps = 106/670 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR------KPQK-----SI 107
AR YQ+EL K A E N IV LGTG GKT+I+VLL+ L H + +P
Sbjct: 23 ARSYQIELFKSAKERNTIVCLGTGTGKTYISVLLLKHLEHEVSGCWVDGEPATPGSGGKR 82
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQIL 166
IFLAPTV LV+QQ V+ + KV + G + L S W E+ + VLVM P IL
Sbjct: 83 SIFLAPTVPLVEQQGAVLGRHLSVKVGIYVGAMQVDLWSRERWVNELKAHGVLVMTPAIL 142
Query: 167 LYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVV 226
H FI + I+L++ DECH A N Y IMK + PR+ G+T S V
Sbjct: 143 YNAACHGFIPLNKISLIVMDECHRATGDDN--YVSIMKLYKDLQPQDRPRVLGLTGS--V 198
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
A + + I LE A ++S + +S +V +Y P
Sbjct: 199 INSALRGVQVTRRIRELE----ATLFSTASS-------ASGLVSMYCTKP---------- 237
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ----LNRLHDSMKFCLENLGVCGALH 342
+E +S SR H+ + ++ + + L D K L L C
Sbjct: 238 ----------KEMIVSCPSRNPHNRLPIDASSMEDLEDCDDLKDFQKI-LSGLSSCYEEC 286
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE 402
++ L E + EL G+ SQ E R+ + + +E +K+
Sbjct: 287 GAFCTLRLIEFRQRELSRNVGD----------SQYPEEL-----REYLMPKMKILERMKK 331
Query: 403 PFFSK---------KLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNLKFLAS 452
F K K+ RL+ +L+ FR C IVFV V A L L L
Sbjct: 332 -FLGKSPPLLDVPPKMHRLLEVLAAFRTNPAGLCGIVFVKLRVIAYVLYQWLGELSKTDD 390
Query: 453 WR---CHFLVGVNAGLKS----------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
WR C F+VG N S M+ A + + FR G NLL+AT V EEG+D
Sbjct: 391 WRFLRCAFIVGHNQAPMSTSNREFENFKMNSKAQRRTIAAFRDGVYNLLLATNVIEEGMD 450
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL-DLIKNFSKEEDRMN 558
+ C LV+RFD P S+ QS+GRAR QS Y L D + E+ D+I +F +E +R+
Sbjct: 451 VPACNLVVRFDAPRDARSYTQSKGRARARQSLYVVLCDENERLEVEDMIDSF-QETERIV 509
Query: 559 REIMDRTSSDAFTCSEERIYKVD-------SSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
D+T E + + D + A ISA +S+L YC + HD++ N
Sbjct: 510 TTFCDQTRRSPDAEESETVLRDDEFLEPFIAGEARISAKSAMSILCWYCQTIVHDQYSNS 569
Query: 612 KPKFYYFD--DLGGTICHIILPANAPIHQIVGT---PQSSMEAAKKDACLKAIEDLHKLG 666
P+F+ D D G T+ + +P P+ + + P + AK L+ LH+
Sbjct: 570 LPEFFTLDKNDEGFTM-SLTMPLLCPVRESITNEDRPMPTRAKAKAYLALEMCRKLHEKR 628
Query: 667 ALNDYLLPQE 676
L ++LLP++
Sbjct: 629 ELTEHLLPRK 638
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 199/470 (42%), Gaps = 80/470 (17%)
Query: 994 HRLENLLVAIELKHL-LSASFP-----EGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
R E I LKHL L +P EG + + + + T E + R ++G+
Sbjct: 1036 ERREFRRTEISLKHLKLEFVYPDLNDCEGPSAADFVRILSKPTTSVDE-LDIGRYRLVGE 1094
Query: 1048 AFLKYAVGRHLFLLHD---TVDEGELTRRRSNAVNNSNLLKLAARNNLQ------VYIRD 1098
+FL+ +G F LHD + E EL RS ++ NLL A N+ +I
Sbjct: 1095 SFLQMVIG---FSLHDQRRNLHEKELRSLRSYKISTRNLLVRAYERNITEILDNVKFIAK 1151
Query: 1099 QPFDPCQFFALGRRCP--------------------RICSKETERTIHSQYDGRA----- 1133
+ F P + L + +C +E + + +A
Sbjct: 1152 ENFLPPGYRTLEKEEKLLDTTFRLAVYRSYGFEIDGSLCLRELRHATNLEEVVKAIAELD 1211
Query: 1134 PDDLNAEVRCS-------------KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLK 1180
P++L E + K + AD V+A+ G +D G A ++
Sbjct: 1212 PEELQHETLQTTLEAGELPSQVPVKKFQTYRARVAADAVKAITGLAVDKCGPSGALRVMR 1271
Query: 1181 WIGIQ----------VEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
W+G++ V+ A + ++ +S + L+ + T+E L ++F H+ L+L
Sbjct: 1272 WLGLEFGRSIDSPDFVDAFALNLDSLRVSDSDAVILNRLHQIETVESRLRYRFEHKALVL 1331
Query: 1231 QAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
+A H S+ + L +L +G V++YLI+ ++ S+ ++ L +LR+ + +
Sbjct: 1332 EAITHHSYRGDSLTQSNVQLCSIGAVVIEYLISKFIASLPLDVESYNLFELRASICSAVN 1391
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYV----DYMITPSSTREVKEG-----PRCPKVL 1339
A++ +K L++ + L I NY+ DY PS + E R P L
Sbjct: 1392 HAHIVAKNGLHKNLLYTNQSLFTVIRNYIDCLDDYEPQPSKSLGDWESDDTDDDRVPLAL 1451
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELL 1387
+++ + +GA+ +DSG NL VW + + IL+ + N+ ++PIREL
Sbjct: 1452 AEMLMALVGAVFIDSGKNLEIVWSVYAELCGEQILRLANNIPISPIRELF 1501
>gi|346970337|gb|EGY13789.1| RNase3 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1563
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 216/658 (32%), Positives = 310/658 (47%), Gaps = 98/658 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +NII L TG GKT IA LL+ E A K I FL
Sbjct: 148 REYQIELFERAKRKNIIAVLPTGSGKTLIAALLLRHTLEQETADRRAGKPKRIAFFLVEK 207
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR---LKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ V+E ++ F + CG R +K W K D V+V IL CL
Sbjct: 208 VALALQQHAVLECNLEFPIDRVCGDMVRSDWIKE--SWMKRWDDNMVMVCTAAILQQCLA 265
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKG 229
FI+M+ I LL+FDE HHA K NHPYA+I+KD+Y +PD + P+IFGMTASPV
Sbjct: 266 RSFIRMDQINLLVFDEAHHA--KGNHPYARIIKDYYITEPDKERRPKIFGMTASPV---- 319
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESF--VSSPVVRVYQYGPVIND--TSSSY 285
A ++ + LE LL +++ ++E ED SF + VV P + T++ +
Sbjct: 320 -DALTDVKIAAAQLEGLLHSEIATIE--EDSVSFKQIQKEVVEQDCKYPALEPPFTTNLH 376
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
EQ+ K + ALS L SL + +C++ +
Sbjct: 377 KKIQEQVRYNK--NFAKALSNSLEMSSSLGS-------------WCVDRF---------W 412
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE-PF 404
+ +ET L T D++ FA +A + AI I + + K
Sbjct: 413 QIFLTEET----LARLAAQTAQDNI--FADRAEKERVAIEEVRNIIKQHQFLPITKTLQD 466
Query: 405 FSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQ-------NLKFLASWRCH 456
S K+L L+G L F KCI+FV + TA L+++L LK A
Sbjct: 467 LSSKVLCLLGQLELRFSAPTDHKCIIFVEKRNTAMILAHLLSLPGIGPLYLKPAA----- 521
Query: 457 FLVGV---NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
LVG N+ L +MS + KFR GE N L+AT V EEG+DI C +VIRFDL
Sbjct: 522 -LVGNPSDNSPL-AMSYKEQVMTITKFRRGEYNCLLATSVAEEGIDIADCNIVIRFDLFN 579
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQR----------ELDLIKNF--SKEEDRMNREI 561
+V +IQS+GRAR SEY + + GN + +L LI+ F + ED R+I
Sbjct: 580 SVIQYIQSKGRARHLNSEYICMAELGNGKHTRAKIQANYDLSLIRQFCSTLPED---RKI 636
Query: 562 MDRTSSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLP-HDEFFNPKPKFYYF 618
+ A E + + V S+GA ++ + +L + S L +DE +P Y
Sbjct: 637 VGWDPEAALHHGERDHKFHIVPSTGAKLTWTGSLVVLSNFASSLQVNDETLSPS----YM 692
Query: 619 DDLGGT--ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
L G+ IC + LP+ +PI + GT Q + A+ A + L K G ++ +L P
Sbjct: 693 VSLIGSEYICEVQLPSKSPILSVSGTLQKNKAEARCSAAFEMCMKLIKGGFISSHLQP 750
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 239/520 (45%), Gaps = 94/520 (18%)
Query: 915 VDHLISSYGIHLKHPK-----------QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
V+H I Y I L QP++ A+ + RNLL + DS+ +
Sbjct: 975 VEHTIKEYSISLWAKSRARRAGEWLDTQPVVEAELVSLRRNLLD--EFADSKHEGSRVCY 1032
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
L P L+I ++ + P+I+HR+E+ ++A++ +L+ V ++
Sbjct: 1033 VILQP----LQISTLPVEVVAMAYNFPAIIHRIESNMIALDACRMLNL------RVRPDL 1082
Query: 1024 LLKALTT------EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
L+A+T E QE+ ERLE LGD FLK A LF +E E
Sbjct: 1083 ALEAMTKDSSNSEEHDQEKIDFQAGMGNNYERLEFLGDCFLKMATTIALFTRIPDSNEFE 1142
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY 1129
R + N NL +A + NLQ YIR + FD ++ G + Q
Sbjct: 1143 CHVERMLLICNQNLFNVALKKNLQEYIRSKQFDRRSWYPQGLK---------------QK 1187
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA----FIDDSGF----KAATAFLKW 1181
G+A + ++ H L K+IADV EA++GA + D+ F +A TA ++
Sbjct: 1188 AGKA--------QGAQNSHSLADKSIADVCEAIIGASYLSYTDEGNFDMAVRAVTAVVRN 1239
Query: 1182 IGIQVE-----FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHP 1236
++ ++A ++ + S + + ASL + +G++F LL AF HP
Sbjct: 1240 KNHDMKSYEDYYKAFKMPIWQAAEPSAVQMEASLQIKEQ---MGYEFKSPALLRSAFKHP 1296
Query: 1237 SFNRLGGC---YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA 1293
S+ R YQRLEFLGDA+LD + +L+ +P P LT+ + +V+N +++
Sbjct: 1297 SYPRQFESVPNYQRLEFLGDALLDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLS 1356
Query: 1294 VDQSFYKFLIFDSNVLSETINNYVDYM------------ITPSSTREVKEGPR-CPKVLG 1340
V+ FY+ ++ +++++ I +YVD + I+ + +R+ + PK L
Sbjct: 1357 VELGFYRRVLHFNSIMANQIKDYVDALTHARQEAEAVAQISGTVSRDYWLNVKHPPKFLS 1416
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
D+VE+ +GAI +DSG++ V + P F+++ L
Sbjct: 1417 DVVEAYIGAIFVDSGYDYGQVQAFFEKHIRPF--FADMAL 1454
>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
Length = 1452
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 202/675 (29%), Positives = 310/675 (45%), Gaps = 111/675 (16%)
Query: 50 KTDKDPKQIA--RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL------AHLIR 101
KT + K IA R+YQ+EL ++A ++N IV L TG GKT IA LL+ I
Sbjct: 48 KTSESRKIIATPREYQIELFERAKQKNTIVVLPTGTGKTLIAALLLRHYLEQEMEDRAIG 107
Query: 102 KPQKSICIFLAPTVALVQQQAKVIEESIG-FKVRTFCGGSKRL-KSHCDWEKEIDQYEVL 159
KP+K + FL VAL QQ V+ ++G + F G K + + W+++ + V+
Sbjct: 108 KPKK-VAFFLVEKVALCYQQYAVLNCNLGEHPITKFWGNMKGMVRKKQYWDQQFSENMVV 166
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFG 219
V QIL+ CL FIKM I LLIFDE HHA K +HPYA+IM++ Y + PRI G
Sbjct: 167 VCTAQILVDCLNDGFIKMSQINLLIFDEAHHA--KKDHPYARIMRNHYIRYQGERPRILG 224
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV + +A A +LE+F+ S +
Sbjct: 225 MTASPVDSQTKDVKAA---------------------ALELETFLCSEI----------- 252
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
T S + E + Q + Q LRN+ + S++F E G
Sbjct: 253 ------ATVSNEFPEDAKTQLWDLIW-----AQVLRNS-----QFKASLEFTKEAASTLG 296
Query: 340 ALHAS--YILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS-DLSC 396
+ A +ILL D + + + + D A A+E + RD + +L
Sbjct: 297 SWCADRYWILLLTDNETKRLVARTDRDFSRDFATNQADHATEAVRRV--RDIVKKRELPP 354
Query: 397 IEVLKEPFFSKKLLRLIGI-LSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWR 454
IE P S K+ +L I L F +CIVFV + TA LS + Q +
Sbjct: 355 IEP-SSPELSPKMKKLHEILLHAFTRDSTKRCIVFVEKRHTAWLLSDLYQQQGMRIPGMV 413
Query: 455 CHFLVGVNAGLKS---MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
++++G + + MS L+KF+ G +N L AT V EEG+D+ C LVIRFDL
Sbjct: 414 AYYMIGSQSASSTHSNMSHRDQVVTLQKFKRGSINCLFATTVAEEGIDVPDCDLVIRFDL 473
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE-------------EDRMN 558
+V ++QS+GRAR S Y +++ GN +L +K ++ + ++
Sbjct: 474 YNSVIQYLQSKGRARQSNSRYITMLEEGNMGQLRSLKQAERDSTALQKFCLSLPADRKLE 533
Query: 559 REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHD-----EFFNPK- 612
+++D + +++Y++ S+GA ++ + + +L +Y + + EF K
Sbjct: 534 DDVVDAVQDELLV---QKVYEIPSTGARLTFAHSMDVLSKYAASITPGVSSKVEFTVTKL 590
Query: 613 -PKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKK----DACLKAIEDLHKLGA 667
PKF I +ILP +P+ + G PQ S AK +AC+K I+D H G
Sbjct: 591 GPKF---------IADVILPDASPLKAMSGFPQRSKLLAKYSAAFEACVKLIKDKHIDGH 641
Query: 668 LNDYL---LPQEDNA 679
L L +P+ NA
Sbjct: 642 LQPTLSKTIPRMRNA 656
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 207/482 (42%), Gaps = 81/482 (16%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+++A+ L RN L +++ EE +D L L++ D+ + P
Sbjct: 887 QPVVKAQMLSLRRNYLDEFQVD-------EEVNNDCFVILEPLRVSPIPLDVAFMVMAFP 939
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSL--------ERL 1042
+I+HR++ L+ ++ +L P + A + E +E+ + ERL
Sbjct: 940 AIIHRIDAALITLDACAMLDLPIPPVLALEAMTKDSDNSGEHDEEQVNFQPGMGSNYERL 999
Query: 1043 EILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFD 1102
E LGD+FLK A LF L DE R + N NL A L YIR + FD
Sbjct: 1000 EFLGDSFLKMATTISLFTLIPESDECGYHVERMILICNQNLFNHAVDRKLHEYIRSKAFD 1059
Query: 1103 PCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
++ P + K+ G+AP E+R H L K+IADV EAL
Sbjct: 1060 RRSWY------PDLPLKK----------GKAP---KTEMR-----HNLADKSIADVCEAL 1095
Query: 1163 VGA-FIDDSG------FKAATAFLKWIGIQVE-FE---------ASQVTNICISSKSFLP 1205
+GA ++ G KA T +K ++E FE A Q ++ + +
Sbjct: 1096 IGAAYLSGKGGSMDLAVKAVTRMVKSKNHKMEKFEDYFAAFKMPAWQQAEANVNQRRLVD 1155
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSY 1263
A +G++F LL AF HPS ++ + YQRLEFLGDA+LD I
Sbjct: 1156 CVADA--------VGYRFKWPALLRSAFKHPSWPYDPVPN-YQRLEFLGDALLDMAIVDN 1206
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-IT 1322
L+ +P+ P LT+ + + +NQ + V +K L ++ L I++Y + +
Sbjct: 1207 LFQRFPQADPQWLTEHKMAMASNQFLGCLCVKLDLHKHLTSTTSSLIGQISSYASELELA 1266
Query: 1323 PSSTREVKEGPRC-------------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
R+ + + PK D++E+ +GA+ +D+ ++ V F+
Sbjct: 1267 EEDARQEAKANKTAMRKDFWLRASAPPKAFADVMEALVGAMFVDAKYDYTVVRNFFTRFI 1326
Query: 1370 DP 1371
+P
Sbjct: 1327 EP 1328
>gi|367022572|ref|XP_003660571.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
gi|347007838|gb|AEO55326.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
Length = 1604
Score = 217 bits (553), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 194/650 (29%), Positives = 277/650 (42%), Gaps = 75/650 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL + A N I L TG GKT IA LL+ EL K I FL
Sbjct: 135 RDYQLELFELAKTRNTIAVLDTGSGKTLIAALLLRWTIQNELESRSSGLPKRIAFFLVDK 194
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
VALV QQ V+ ++ + + FCG S W K D+ +V IL CL H +
Sbjct: 195 VALVFQQHAVLTCNLDYPIEKFCGDMVENVSEDFWRKAFDENMAIVCTADILYQCLSHSY 254
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK--PDIMKVPRIFGMTASPVVGKGASA 232
++M+ + LL+FDE HH K NHPYA+I+KDFY D K PRI GMTASPV A
Sbjct: 255 VRMDQVNLLVFDEAHH--TKKNHPYARIIKDFYTDVKDENKRPRILGMTASPV-----DA 307
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP---VVRVYQYGPVINDTSSSYVTCS 289
Q + + LE LL +++ +V D L + + P VV Y P
Sbjct: 308 QTDPKVAAAELEGLLHSQIATVADPTVLHNSSAKPKHEVVAEYDKRP------------- 354
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYILL 348
+ + L++ L +SL + R LG C +
Sbjct: 355 --------PDWETELNQAL---KSLVGDLRVFRRPFAFTDTAAAELGPWCADRYWQLFFE 403
Query: 349 SGDETMRNELIEAEG---NTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
G+ E E +T D + + E + R + +
Sbjct: 404 EGEAVKLESRAEMEAFSQSTYDQGVGHPVDKVREAHNLVKRHTFARPSIGVL-------- 455
Query: 406 SKKLLRLIGILST--FRLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVN 462
S K++ L+ IL +R +CIVFV + T L+ +LQ + + LVG
Sbjct: 456 SSKVVLLLRILREQFYRANHRRRCIVFVRQRNTVSLLADLLQQPEMKIPGLVPGLLVGGG 515
Query: 463 ------AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
K R+ +++I KF+ GELN + AT V EEGLDI C +IRFDL +T+
Sbjct: 516 HPDASYGNAKVTYRDQVRTIY-KFKKGELNCIFATSVAEEGLDIPDCNAIIRFDLNDTLI 574
Query: 517 SFIQSRGRARMPQSEYAFLVDSG----------NQRELDLIKNFSKEEDRMNREIMDRTS 566
+IQSRGRAR S Y +V+SG NQ+ D ++ F + + + +
Sbjct: 575 QYIQSRGRARQEGSVYIHMVESGNLEHRRKLAQNQQSEDALRKFCEAMPEDRKLTGNNFN 634
Query: 567 SDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
D F E +R Y V +GA ++ + L + + LPH + + GG
Sbjct: 635 MDYFLRKEKGQRQYTVPETGAKLNYRQSLVFLAAFVASLPHPPGVSLTADYLVLPVPGGF 694
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
C + LP ++PI G S AK A + L K L+ +L P
Sbjct: 695 QCEVTLPDSSPIRNATGKVHESKAVAKCSAAYEMCLKLIKANYLDQHLRP 744
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 213/509 (41%), Gaps = 105/509 (20%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDIGSS 985
QP++ A+ L RN L + + D DDL P+ C L+I D+ +
Sbjct: 996 QPVVEAELLPIRRNFLDD-NIRD----------DDLEPKPCFLVLEPLRISPLPVDVVAM 1044
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERF-- 1037
+ PSIMHR+++ LVA+E L G + ++ L+A T E E+
Sbjct: 1045 VYTFPSIMHRIDSNLVALEACKKL------GLNIRPDLALEAFTKDSDNTDENDAEKIHF 1098
Query: 1038 ------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
+ ERLE LGD FLK A +F L DE E R V N NL A
Sbjct: 1099 QGGMGSNYERLEFLGDCFLKMATTISIFTLLPDKDESEYHIERMLLVCNRNLFNKALEVK 1158
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH 1151
L+ YIR FD ++ G + K +R R G H L
Sbjct: 1159 LEEYIRSTAFDRRSWYPEG-----LTLKRGKR------------------RDVDGKHQLA 1195
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAF---LKWIGIQVEFEASQVTNICISSKSFLPLS- 1207
KTIADV EAL+GA + ++ + F ++ + + V +++ ++ P
Sbjct: 1196 DKTIADVCEALIGAAYLTAQDRSPSDFDLAVRAVTVMVRDRNHAMSSYGDYYAAYRPAKW 1255
Query: 1208 -------ASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVL 1256
A +DMA +G+ F H LL AF HP++ YQRLEFLGDA+L
Sbjct: 1256 QTVPCSPAQIDMAARFRERMGYAFRHPRLLRSAFQHPAYPTFYEGLPSYQRLEFLGDALL 1315
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D +L+ +P P LT+ + +V+NQ A +AV F+K ++ S+ + + +
Sbjct: 1316 DMACVEFLFRRFPGADPQWLTEHKMAMVSNQFLACLAVYLGFHKSIVHCSSQVQSEVAGF 1375
Query: 1317 VDYM-----------------------------ITPSSTRE--VKEGPRCPKVLGDLVES 1345
V + + R+ V+ R PK L D+VE+
Sbjct: 1376 VAEVEGELRAAKEGTEEGEEGEEEEEEKKERGGEEEAFARDFWVRCARRPPKCLADVVEA 1435
Query: 1346 SLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
+GA+ +DSG++ V + + P +
Sbjct: 1436 YVGAVFVDSGYDFGEVRRFFADHVRPFFE 1464
>gi|426194802|gb|EKV44733.1| hypothetical protein AGABI2DRAFT_209093 [Agaricus bisporus var.
bisporus H97]
Length = 1524
Score = 217 bits (552), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 202/703 (28%), Positives = 323/703 (45%), Gaps = 113/703 (16%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ +++++ NII+ + TG GKTHIAVL I H + + F APTVAL
Sbjct: 15 TRGYQQEMLEESIKHNIIIAMDTGSGKTHIAVLRI---KHEVEREPSKAAWFFAPTVALC 71
Query: 119 QQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ VI+ + V G + KS WE+ ++ + V+V PQ+ L L H +I
Sbjct: 72 AQQKAVIQTHLPVSVGLVSGALEPDQWKSAELWERVLNTHRVIVSTPQVFLDALRHAYID 131
Query: 177 M-ELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKV--------PRIFGMTA 222
+ + I+LL+FDE HHA +HPYA+IM DFY +P +++ P + G+TA
Sbjct: 132 LGKDISLLVFDEAHHA--TGDHPYARIM-DFYHRIEERPANLRLYGISQVSRPYVLGLTA 188
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSPVVRVYQYGPVINDT 281
SP+ G ++ KS N LE LD + + +L FV P+ + Y +
Sbjct: 189 SPIYG------GDVVKSFNMLEKNLDCIIRAPRRTRAELAQFVHRPIFQHVMYEQWPDAP 242
Query: 282 SSSYVTCSEQLA---EIKREQYISALSRKLHDHQSLRNTTKQLNR--------------- 323
S+ +T + +I+++ Y+ +L +KL + L + +L++
Sbjct: 243 FSTNLTVISNIVRSLQIEKDPYVISLRQKLATVKPLTSEYFRLDQKLSITIRTQKTFVFK 302
Query: 324 -LHDSMKFCLENLGVCGALHASYILLSGDETMR------NELIEAEGNTIDDSLCRFASQ 376
L D + + L G A + + E R N ++ + +T L +
Sbjct: 303 GLRDFERAASDILLDLGPWAADWYVWRIAEKAREAANPFNNIMASWKDTEKSHLLKLLDS 362
Query: 377 ASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK-----CIVFV 431
A + D I D C S KL RLI L +++ + +VFV
Sbjct: 363 AVLTPVSYGEED-IMGD--C---------SDKLQRLIETLLNEKMETEKRDEVYSGLVFV 410
Query: 432 NRIVTARALSYILQNLKFLAS-WRCHFLVGVNAG---------LKSMSRNAMKSILEKFR 481
R T AL+ +L N F + +R FL+G + + ++R + + +FR
Sbjct: 411 QRRDTVIALAEVLNNHPFTKNIFRIGFLLGTSDSSRRHSFLDISRKLARETQEETMAEFR 470
Query: 482 SGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ 541
SG+LNL++AT V EEG+DIQ C VIR+DLP+ +AS+ QSRGRAR +S + + +G+Q
Sbjct: 471 SGDLNLIIATAVAEEGIDIQACGSVIRWDLPQNMASWAQSRGRARKRRSTFTLMFANGSQ 530
Query: 542 RELDLIKNFSKEEDRM-------NREIMDRTSSDAFTCSE-ERIYKVDSSGACISAGYGV 593
E + ++ + E RM R++ T S T + + I+ V+S+ A S +
Sbjct: 531 DEQN-VRKWELLERRMVELYNDPARDLAMETESLMDTDDDVDEIFFVESTRASTSVHSAI 589
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC-HI------ILPANAPIHQIVGTPQ-- 644
S L +C+ +P + +P Y D + H +LP N P V P+
Sbjct: 590 SHLAHFCAVIPIRAHVDIRP-IYEIDPPDMPLAWHADPHRSNLLPYNGPWGSKVILPRCL 648
Query: 645 -------------SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
SS +A + +A L+K G LN+ LLP
Sbjct: 649 PLACREFSVPMKYSSKVSAHRHVAFEAYVGLYKAGLLNENLLP 691
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 151/596 (25%), Positives = 252/596 (42%), Gaps = 90/596 (15%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
PLL KP N L K D S E + L PE + +I S ++ + LLPS
Sbjct: 925 PLLVVKPFHPRCNFLIPTKPRDPGSSAPEIKYVYLMPEFTGITLIS-STEVEYAF-LLPS 982
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
++ LE L L+ L P ++ +L A+T E+++ +RLE LGD LK
Sbjct: 983 VLRSLEINLTMASLRSNLFMPSPSLQDIPLALLSNAMTASSAGEKYNYQRLETLGDTVLK 1042
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
+ V + + + EG LT+++ + V N NL K + L +I + LGR
Sbjct: 1043 FLVALQVLVEYPLWHEGYLTKKKDHTVANVNLAKENINHRLYRWI-------IKEIMLGR 1095
Query: 1112 RC-PRICSKETERTIHSQYDGRAPD-----DLNAEV--------RCSKGHHWLHKKTIAD 1157
+ PR +K T + + D AE+ + + L K +AD
Sbjct: 1096 KWRPRYSTKLLPPTTPLSEEKIVEELLMVVDEGAELSSKGAAKKKKKSKNQGLSTKILAD 1155
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVTNICISSKSFLPLSASLDMATL 1215
VVE+L+GA GF K G+ + + ++ + + + + ++L +
Sbjct: 1156 VVESLIGAAYIHGGFPLGYECTKLFGLGLRWLPPPERIKDFLGAVEPDKNIPSAL--YYV 1213
Query: 1216 EILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPK-LK 1272
E +LG+ F H+ LLL+A H S+ + Y+R+EFLGD+VLD ++T YLY K
Sbjct: 1214 EKMLGYTFKHKVLLLEALTHASYQQDARTVSYERMEFLGDSVLDMVVTDYLYHAPGKNYS 1273
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKF-------------LIFD-------------- 1305
PG + RS +VN A + + S KF L+ D
Sbjct: 1274 PGHIHLRRSSVVNTHFLAYICLKTSV-KFDALMPRADDEGIELLADAQEVMLWQCLLHSS 1332
Query: 1306 SNVLSETINNYVDYMITPSSTREVKEG-------P-------RCPKVLGDLVESSLGAIL 1351
S ++ + N + + E++EG P + PK D++ES +GA+
Sbjct: 1333 SRIMDDQANTHTRFK---KRREEIEEGLMNDTIFPWAALTRLQAPKFFSDIIESVIGAVF 1389
Query: 1352 LDSGFNLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG 1406
LDS +++T + +L L+ I+ + +P+ + + + ++ L + K+ G
Sbjct: 1390 LDSNGDIDTARDVITKLGILPTLERIVHDNVDVWHPVSRISQWASKHEKKLGWQFEKERG 1449
Query: 1407 KFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESI 1462
V G+ + ACA + R AS Q KL AA ++ L +
Sbjct: 1450 VVKCSVLVDGE-----VEACAMD-----DYRGASTQDEVKLIAAENASRSLRLRRV 1495
>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666 SS1]
Length = 1500
Score = 216 bits (551), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 235/1010 (23%), Positives = 435/1010 (43%), Gaps = 106/1010 (10%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASW-RCHFLVG----VNAGLKSMSRNAMKSILEKFRS 482
IVFV + A L+ +L + L RC VG G+K+ +N +LE FR
Sbjct: 390 IVFVEQRHVASGLARLLSKVDELKGVVRCAEFVGHASDTGEGMKAGEQN---RVLESFRK 446
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
+NLL+AT+V EEGLD C +V+RFD + + F+QSRGRAR S + +V+ G++
Sbjct: 447 RSINLLIATQVAEEGLDFPACDVVVRFDSIQHLVGFVQSRGRARHKDSTFVIMVEQGDET 506
Query: 543 ELDLIKNFSK-------------EEDRMNREIMDRTSSDA------FTCSEERIYKVDSS 583
++ K F++ E N M SD ++ + V +
Sbjct: 507 AIERYKRFAEIDSLSSVSSASAASETPTNLTSMRGMGSDEDDEPNEVDLAQRERFVVSDT 566
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNP-KPKFYY-FDDLGGTICHIILPANAPIH---- 637
A +S + LL R C+ +P D F KP + G +C + LP+ P+
Sbjct: 567 KAVLSYNNAIDLLSRLCALIPTDNFTRTYKPTYITNIAQTGYYVCSLTLPSALPLPHGHL 626
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
+ G + S AK+ A++ L+ L ++YLLP + + D+ E
Sbjct: 627 KYTGPGKCSKREAKRAVAFLAVKALYGLNVFDEYLLPARS--------VKDMEQDAEEST 678
Query: 698 GSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAE 757
G + +P ++ + + + + + D +R+ GL + LP
Sbjct: 679 GGAAYIDVKQIPQMMNVD-VRDPFVLGIKMWLHTVYVD-GERVA---GLVTGTHLP---- 729
Query: 758 HLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESS- 816
+V+L G V T V + A +E + +L EF+ G +C ++
Sbjct: 730 --QVELSW-EGTGVRTGAVEAVAFDADPLKEDRQRQVL------QEFMAWGLW-WCVTTR 779
Query: 817 ---SSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSS 873
L+P++ H+N D++++ R ++ G + S G L N W
Sbjct: 780 PLAGPLTCFLVPLVLHENQPDFELMERIVA---IGLGCSDCTQLSEKDFGRLLCTNRW-- 834
Query: 874 ESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSY-----GIHLKH 928
E+ + H+ + L + + + + +++ +++ L + Y + LK
Sbjct: 835 ----EHGRSFILHRIRYDLTPSSMLPEGSMA--REAGFTTYGQWLRARYKRKKFSVVLKD 888
Query: 929 PKQPLLRAKPL-FRLRNLLH-NRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSL 986
+ L+ A+ L + + H + + +D+ ++++ ++ P L + S + +
Sbjct: 889 -DEVLVEARRLKLQCSGIYHLHSRPDDAVPMDVDDIDTNIFP-LSSCRWTAISTSLYRTF 946
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
LLP ++HR+ ++ A + L+ P ++ ++L++A T + ++ +R E LG
Sbjct: 947 GLLPRLLHRINDVFRAQSAQ--LALGLP---PINTDLLIEAYTIPAARTGWNNQRFETLG 1001
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK H+F + EG+L+ R A++N LL+ A +L+ ++ +
Sbjct: 1002 DSVLKLCTSVHVFNKYPWRHEGQLSVLRQVAISNMTLLRKAKAVSLESFLNTESTS---- 1057
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH----KKTIADVVEAL 1162
R C H + + D + S+ +H ++++ D +EA
Sbjct: 1058 ---NETTWRYCLPSGPAPHHPCHPVKDTDRVPLPPPSSRPRRLVHRRFPRRSLQDCMEAT 1114
Query: 1163 VGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQ 1222
+GA G A +G+ +T +S L L+ LG+
Sbjct: 1115 LGAAYATGGIPMALQAGTALGLNFGGSIPWLTRFGKQCESSAERPGVL-FNVLQERLGYT 1173
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F + LL++A HPSF G YQRLEFLGDAV+D + SYLY+ +P G+L+ R+
Sbjct: 1174 FRNPELLVEAMTHPSFATGGQSYQRLEFLGDAVIDLTVMSYLYNKFPSATSGKLSTARAR 1233
Query: 1283 LVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSSTREV--KEGPRCPKVL 1339
V+ +++AV +K ++ + LS + Y+ + S V PK +
Sbjct: 1234 AVSAPVLSSIAVKHLGLHKLMLVNETNLSIAMGKYLPTLEETSYEDMVLNAWAHDPPKAI 1293
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRELL 1387
D++ES LGA+ +DSG+N + + ++ +L+ + +P+ EL+
Sbjct: 1294 SDVLESLLGAVFVDSGWNWDLAQAVTEGVMNDVLELLSPDTPKDPVSELM 1343
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 12/201 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ E+ +A N+I LGTG GKT+I++LLI + I +FL P V LV+
Sbjct: 15 RQYQEEIFIRARHSNVIAVLGTGSGKTYISILLIKSITSQSHLSAGKIVVFLVPKVPLVE 74
Query: 120 QQAKVIEESI-GFKVRTFCGG---SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ+ IE+ + +VR GG + + + +W+K D +++VM Q+ + L H
Sbjct: 75 QQSVFIEKQLPSLRVRKVHGGDALAGDMLNRAEWKKFFDSADIVVMTAQVFVNALTHSHW 134
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVVGKGASAQA 234
++ ++LLIFDECHH ++ NHPY IM+D YK + P+IFGMTAS VV + + AQ
Sbjct: 135 SIDKVSLLIFDECHHTRL--NHPYNVIMRDSYKHCSPSQRPKIFGMTAS-VVWRPSRAQE 191
Query: 235 NLPKSINSLENLLDAKVYSVE 255
+L LE L AK +V+
Sbjct: 192 DL----QELEANLVAKAITVQ 208
>gi|302422698|ref|XP_003009179.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261352325|gb|EEY14753.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1510
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 215/655 (32%), Positives = 307/655 (46%), Gaps = 92/655 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +NII L TG GKT IA LL+ E A K I FL
Sbjct: 148 REYQIELFERAKRKNIIAVLPTGSGKTLIAALLLRYTLEQETADRRAGKPKRIAFFLVEK 207
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR---LKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ V+E ++ F + CG R +K W K D V+V IL CL
Sbjct: 208 VALALQQHAVLECNLEFPIDRVCGDMVRSDWIKE--SWMKRWDDNMVMVCTAAILQQCLA 265
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKG 229
FI+M+ I LLIFDE HHA K NHPYA+I+KD+Y +PD + P+IFGMTASPV
Sbjct: 266 RSFIRMDQINLLIFDEAHHA--KGNHPYARIIKDYYITEPDKERRPKIFGMTASPV---- 319
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
A ++ + LE LL +++ ++E +D SF + Q V D S +
Sbjct: 320 -DALTDVKIAAAQLEGLLHSEIATIE--QDSASF------KQIQKEVVEQDCKYSAL--- 367
Query: 290 EQLAEIKREQYISALSRKLHDH-QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
+ + L +K+ + + RN K L+ S++ +LG I L
Sbjct: 368 -------EPPFTTNLHKKIQEQVRYNRNFAKALSH---SLEMS-SSLGSWCVDRFWQIFL 416
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE-PFFSK 407
+ + R A+ N FA +A AI I + V K S
Sbjct: 417 TEETLARMAAQTAQDNI-------FADRAEREHVAIEEVRNIIKQHQFLPVTKTLQDLSS 469
Query: 408 KLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQ-------NLKFLASWRCHFLV 459
K+L L+G L F KCI+FV + TA L+++L LK A LV
Sbjct: 470 KVLCLLGQLELRFSAPTDHKCIIFVEKRNTAMILAHLLSLPGTGPLYLKPAA------LV 523
Query: 460 GV---NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
G N+ L +MS + KFR GE N L+AT V EEG+DI C +VIRFDL +V
Sbjct: 524 GNPSDNSPL-AMSYKEQVMTITKFRRGEFNCLLATSVAEEGIDIADCKIVIRFDLFNSVI 582
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQR----------ELDLIKNF--SKEEDRMNREIMDR 564
+IQS+GRAR SEY + + GN + +L LI+ F + ED R+I+
Sbjct: 583 QYIQSKGRARHLNSEYICMAELGNGKHTRAKIQANYDLSLIRQFCSTLPED---RKIVGW 639
Query: 565 TSSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLP-HDEFFNPKPKFYYFDDL 621
A E + + S+GA ++ + +L + S L +DE +P Y L
Sbjct: 640 DPEAALHHGERDHEFHIIPSTGAKLTWTGSLVVLSTFASSLQVNDETLSPS----YMVSL 695
Query: 622 GGT--ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
G+ IC + LP+ +PI + GT Q + A+ A + L K G ++++L P
Sbjct: 696 IGSEYICEVQLPSRSPILSVSGTLQKNKAEARCSAAFEMCMKLIKGGFISNHLQP 750
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 216/510 (42%), Gaps = 127/510 (24%)
Query: 915 VDHLISSYGIHLKH-----------PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
V+H I Y I L KQP++ A+ + RNLL DSE +
Sbjct: 975 VEHTIKEYSISLWAKSRARRAGEWLAKQPVVEAELVSLRRNLLDG--FADSEQAGSRICY 1032
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
L P L+I + + P+I+HR+E+ ++A++ +L+ +V ++
Sbjct: 1033 VILQP----LQISTLPVKVVAMAYNFPAIIHRIESNMIALDACRMLNL------QVRPDL 1082
Query: 1024 LLKALTT------EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
L+A+T E+ QE+ ERLE LGD FLK A LF +E E
Sbjct: 1083 ALEAMTKDSSNSDEQDQEKIDFQAGMGNNYERLEFLGDCFLKMATTIALFTRIPDSNEFE 1142
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY 1129
R + N NL +A + NLQ YIR + FD ++ G + Q
Sbjct: 1143 YHVERMLLICNQNLFNVALKKNLQEYIRSKQFDRRSWYPQGLK---------------QK 1187
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
G+A + ++ H L K+IADV EA++GA ++L +
Sbjct: 1188 AGKA--------QGAQNSHSLADKSIADVCEAMIGA-----------SYLSYAD------ 1222
Query: 1190 ASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC---YQ 1246
+ DMA F LL AF HPS+ R YQ
Sbjct: 1223 -----------------EGNFDMA---------FKSPALLRSAFKHPSYPRQFESVPNYQ 1256
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGDA+LD + +L+ +P P LT+ + +V+N +++V+ FY+ ++ S
Sbjct: 1257 RLEFLGDALLDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVLHFS 1316
Query: 1307 NVLSETINNYVDYM----------------ITPSSTREVKEGPRCPKVLGDLVESSLGAI 1350
V++ I +YVD + I+ V+ PK L D+VE+ +GAI
Sbjct: 1317 GVMANQIKDYVDALTHARQEAEAAAQISGVISQDYWLNVQHP---PKFLSDVVEAYIGAI 1373
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
+DSG+N + V + P F+++ L
Sbjct: 1374 FVDSGYNYSQVQAFFEKHIRPF--FADMAL 1401
>gi|154300125|ref|XP_001550479.1| hypothetical protein BC1G_10438 [Botryotinia fuckeliana B05.10]
Length = 1398
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 313/669 (46%), Gaps = 95/669 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQLE+ +++++ N+IV + TG GKTH+AVL I LA L R I FLAPTVAL
Sbjct: 74 RTYQLEMLEESLKRNVIVAMDTGSGKTHVAVLRI--LAELERMKPGKIIWFLAPTVALCA 131
Query: 120 QQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q + ++ S+ K+ G R W+ + +V+V Q+LL L H F++
Sbjct: 132 QHHEYLQLNIPSVLIKMLIGADGVDRWTEQRQWDTVLKDVKVVVSSYQVLLDALTHGFVR 191
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKP--DIMKVPRIFGMTASPVVGKGASAQA 234
M ++L+IFDE H+ K+ P AKIMK FY P I +P I G++ASPV+
Sbjct: 192 MGRLSLIIFDEAHNCVNKA--PGAKIMKSFYHPYKSIFPLPHILGLSASPVMRSS----- 244
Query: 235 NLPKSINSLENLLDA-----KVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
P+S++ +E LDA K++ DL V P++ + Y P N + V
Sbjct: 245 --PQSLSDIEETLDAICCTPKIHRA----DLRLRVKLPLLSIIYYTPESNIIVTKTVASL 298
Query: 290 EQLAE---IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
++ + I + Y+ L R + ++L ++ S K ++
Sbjct: 299 RKIVQSLNIFEDPYVLTLKR-----SDSEKSQRELAKVLKSFK-----------TYSQTQ 342
Query: 347 LLSGDETMRNELIEAE------GNTIDDSLCRF--ASQASEVF----AAICRRDGIASDL 394
L S D+T NE+I E I + R+ A A + F + + IA L
Sbjct: 343 LKSIDKT-SNEIILVELGPWAADYYISTVVTRYLKAMSAKDTFIVEDSPAAEKLYIAKAL 401
Query: 395 SCIEVLKEPF-----FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+E+ S K+ +L+GI++ + + I+FV T L+++L +
Sbjct: 402 RQVEISPSTLSDTGKISNKVEKLLGIIA--QQKPPFSAIIFVQERATVSVLAHLLSHHPL 459
Query: 450 LAS-WRCHFLVGVNAGLKSMSR-------NAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
++ +VG + K + N K L F+ G++++L+AT V EEG+D+
Sbjct: 460 TKDRFKIGTMVGTSLNGKRTDQIGELVDVNQQKDTLSSFKRGKIDILIATNVLEEGIDVP 519
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG----NQRELD--LIKNFSKEED 555
C LVI F P + SF+Q RGRAR S+ L SG N EL+ + + + KE
Sbjct: 520 ACNLVICFSKPANLKSFVQRRGRARQQDSKLILLDASGDKATNWHELERKMREEYGKEMR 579
Query: 556 RMNR----EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
+ E D S D +R+ +++S+GA + + L+ +CS L +F +
Sbjct: 580 ELQHIYEIETADEQSED------DRVLRIESTGAQLDLDSALPHLYHFCSVLTTKDFVDL 633
Query: 612 KPKFYYFDDLGGTICH--IILPANAP----IHQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
+P F Y +LG +ILP + +H+ G+ S AA KDA +A L++
Sbjct: 634 RPDFVYSSELGSEYVRAKVILPGSVSKPLRVHESRGSWLSERSAA-KDAAFEAYSALYRG 692
Query: 666 GALNDYLLP 674
G +ND LLP
Sbjct: 693 GLVNDNLLP 701
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 201/524 (38%), Gaps = 139/524 (26%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEILG 1046
++PSI H +E LV LS + + E+S + L++ A+T + +RLE LG
Sbjct: 937 MIPSITHHIEVQLVV----DRLSRTILKDLEISDQSLIQTAITHASYSLDSNYQRLEFLG 992
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK L H EG L+ + V+NS + AA L YI + F ++
Sbjct: 993 DSILKLCTSVQLVAEHLDWHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKW 1052
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
+ DDL V + + K ++DVVEAL+GA
Sbjct: 1053 RPM-----------------------YVDDL---VVTEQKTREMSSKILSDVVEALIGA- 1085
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
S P+ E +L + F +
Sbjct: 1086 -----------------------------------SLRPV---------EQILAYTFTKK 1101
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
LL++A HPS+ +RLEFLGD++LD +I + ++S L + LRS LVN
Sbjct: 1102 SLLVEAMTHPSYTSGTQSLERLEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNA 1161
Query: 1287 QAFA----NVAVDQSFYKFLIFDSNVLSETINNYVDYMIT---PSSTR------------ 1327
A +++DQ+ ++ + ET + +++ SS R
Sbjct: 1162 DFLAFLCMEMSIDQNVTNLTEGKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRH 1221
Query: 1328 ---------EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLNTVWKIM--- 1365
+ G P K D++ES LGA+ +DSG ++ +++
Sbjct: 1222 AELRDQILEAIYTGDTFPWALLSRLDARKFFSDMIESLLGAVWIDSG-SMEVCTQLIERM 1280
Query: 1366 --LSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD--- 1420
L ++ ILK ++P EL + +S ++ K GG +A D D
Sbjct: 1281 GVLRYMRRILKDGVRIMHPKEELGIVADSENVRYVLRREKMGG----DATEVNADADEEV 1336
Query: 1421 -------VFISA----CATNLSRKEAIRI-ASQQLFSKLKAAGY 1452
VF+ +RKE I+ A++Q LKA G+
Sbjct: 1337 RTEYRCTVFVGGEEIVEVRGGARKEEIQARAAEQAVRILKARGH 1380
>gi|193582606|ref|XP_001943370.1| PREDICTED: endoribonuclease Dcr-1-like [Acyrthosiphon pisum]
Length = 1626
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 213/409 (52%), Gaps = 67/409 (16%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALTT + + LERLE +GD+FLKYAV +L+ H+ V EG L+ RSN V+
Sbjct: 1187 SPSILLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVS 1246
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRA------ 1133
N NL +L L+++ ER I ++++ R+
Sbjct: 1247 NLNLYRLGK---LKMF-------------------------GERMISTKFEPRSNWLPPC 1278
Query: 1134 ---PDDLNAEV---RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV- 1186
P L V S H + K+IAD VEAL+GA++ G + A F+ W+GI V
Sbjct: 1279 YIGPHKLEKAVINSNISITQHITNDKSIADCVEALIGAYLISCGTRGALLFMSWLGITVL 1338
Query: 1187 -EFEASQVTNICISSKSFL--------PLSASLD-MATLEILLGHQFLHRGLLLQAFVHP 1236
+ S++ + + L L+ +D + E LG+ F R LLQA H
Sbjct: 1339 NTLDDSKLGYLKLPPSPLLRNVNDPEGELTKLMDGFESFEQHLGYYFQDRSYLLQAMTHA 1398
Query: 1237 SF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
S+ N L CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1399 SYYPNCLTDCYQRLEFLGDAVLDYLITRHLYEDKRRHPPGALTDLRSALVNNTIFASLAV 1458
Query: 1295 DQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPKVLGDL 1342
F+K+L S LSE + +V ++ + E E PKVLGD+
Sbjct: 1459 KNGFHKYLKHLSPGLSEVVYRFVAIQEENGHTIDEEFCFSGEDDFEDAEDVEAPKVLGDI 1518
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
ES GAI LDS +L+ VWK+ + + I +FS N+ ++P+RELLEL
Sbjct: 1519 FESVAGAIYLDSNMSLDAVWKVYHKIMENEIKQFSKNVPISPVRELLEL 1567
Score = 90.5 bits (223), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 33/282 (11%)
Query: 422 QQHMKCIVFVNRIVTARALSYILQNLKFLAS----W-RCHFLVGVNAGLKS------MSR 470
++++ I+ VN +TA L ++ +LK W ++V NA + + R
Sbjct: 419 EENVCAIILVNSKMTASVLYHLFLDLKNSNEEDFGWIEPQYMVDNNADPITEPEEFEIER 478
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
++IL++FR N+L+ TK E G+++ C LVI ++LP + S++ S+ +AR +
Sbjct: 479 KTQENILKRFRQRNCNVLIGTKELETGINLPRCNLVINYNLPLSYKSYLMSKSKARTLDA 538
Query: 531 EYAFLVDSGNQREL----DLIKNFSK--------EEDRMNREIM-DRTSSDAFTCSEERI 577
Y + D ++ L K+ ++ ++ M +EI DR + F +
Sbjct: 539 YYVLMFDEHATSKILSCCQLYKDINQMLLSHCTLKDIDMEKEIYADRF--NWFVSPFKPG 596
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPAN 633
K DS A + + L++RYC+KLP D F P + +++ +C I LP N
Sbjct: 597 KKEDS--AFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKIQSIVYENQPMFVCSIRLPIN 654
Query: 634 API-HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+PI H+I G P AK+ A L+ ++ G L+D L P
Sbjct: 655 SPIKHEIHGHPMPCEILAKRIAALEVCRQIYSQGQLDDTLQP 696
>gi|238499727|ref|XP_002381098.1| Dicer-like protein [Aspergillus flavus NRRL3357]
gi|220692851|gb|EED49197.1| Dicer-like protein [Aspergillus flavus NRRL3357]
Length = 694
Score = 214 bits (545), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 188/585 (32%), Positives = 278/585 (47%), Gaps = 87/585 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL ++A +N I L TG GKT IAVLL L H+I+ KP + I F
Sbjct: 105 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLL---LKHIIQNELIDRANGKPPR-ISFF 160
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V L QQA V+ ++ V F G L S W+ + + V+V +IL C
Sbjct: 161 LVDSVTLAFQQAAVLRNNLDQNVVQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQC 220
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGK 228
L + +I+M+ I LLIFDE HH K +HPYA+I+++ Y K D K PRIFGMTASP+ K
Sbjct: 221 LLNSYIRMDQINLLIFDEAHH--TKKDHPYARIIRESYLKADPTKRPRIFGMTASPIDTK 278
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G ++ +S LE LLD+K+ + L V P+ ++Y
Sbjct: 279 G-----DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEY-------------- 319
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE---NLGVCGALHASY 345
++ + KL +Q L+ ++ L +F L+ LG C A A
Sbjct: 320 ---------DKLDPPFATKL--YQILQARFGDISSLQPVFRFTLQASSELGPCCADRAWA 368
Query: 346 ILLSGD-----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
L+ D E +L ++ + I R S+ E ASD+
Sbjct: 369 YALADDVLPKLEGNVRKLAQSISSPIPQCALREISRIQE-----------ASDIVKNHSF 417
Query: 401 KEPFFSKKLLRLIGILST-----FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
P F +L + +L F KCIVF + TA+ L + L+ + R
Sbjct: 418 NSPNFPGELSPKVQLLRQKLIKYFEHPTETKCIVFTQKRYTAKMLFDLFSTLE-IPYLRP 476
Query: 456 HFLVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
L+GV +G + M+ + + L KFRSGE+N L AT V EEGLDI C LVIRFDL
Sbjct: 477 GVLIGVRSGDIVGMNVSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVIRFDLY 536
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQ---------RELD-LIKNFSKE--EDRMNRE 560
T+ ++QSRGRAR S YA +++ N RE + L+++F + EDR+
Sbjct: 537 NTLIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILHG 596
Query: 561 IMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPH 605
I S E+R + + ++GA ++ +++L RY S L +
Sbjct: 597 IDSEIDSILQDEEEKRTFIIRATGAKLTYHSALAILARYASSLSY 641
>gi|328696730|ref|XP_003240109.1| PREDICTED: endoribonuclease dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1648
Score = 214 bits (545), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 239/1013 (23%), Positives = 432/1013 (42%), Gaps = 159/1013 (15%)
Query: 52 DKDPKQ----IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---Q 104
D+ PK + RKYQLEL + + N I+YL TG GKT+IA +L+ + + KP
Sbjct: 2 DQPPKDTSEIVPRKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQG 61
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIP 163
K F+ +V LV QQA + + + + TF G + S W + +++ +LVM
Sbjct: 62 KKWTFFIVQSVPLVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTA 121
Query: 164 QILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM--KVPRIFGMT 221
QI L L H ++ ++ LLIFDECHHA + HP+ +IM+ + D+ + PRI G+T
Sbjct: 122 QIYLNNLRHGYMHIKDANLLIFDECHHAV--ALHPFKQIMQVLHDTDLKTDERPRILGLT 179
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVIN 279
A+ + + + L K L+ +A + + D ++++ F + P +R+Y
Sbjct: 180 ATLINANTKNVKEELTK----LQITFNATIKTRYD-DNIQIFSARPKEFIRLY------- 227
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
Y+ E A +KR L T L ++ MK +E +
Sbjct: 228 ---DEYILDDEIKAIVKR----------------LNTNTCNLRKIQAPMK--IEPIKENN 266
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASD------ 393
+ + N ++ E N +D I ++ I +D
Sbjct: 267 ETYYLEYQKQASKNFANYFLDIEANLVDGGAYIAYLVTWHFMVEIEKKRKICTDAKRLTI 326
Query: 394 ----LSCIEVLKEPFF--------------------SKKLLRLIGILSTFRLQQHMKCIV 429
LS + + ++ + S KL +LI ILS+ +L C+V
Sbjct: 327 MSLVLSELTITRKMLYDYMNKHLIIHKGHSTKLHNTSPKLKKLIEILSSIKLTD--TCLV 384
Query: 430 FVNRIVTARALSYILQNLKFLASWR-----CHFLVGVNA----GLKSM--SRNAMKSILE 478
FV+R TA+ L + +++ ++ + C F+VG K M + I++
Sbjct: 385 FVDRRTTAKILYHYIKD--YIEEFNQVNIVCEFIVGARGIFSPDCKEMVYKKQQNNDIIK 442
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KF +N+L+ ++V EEG+DIQTC VIR+D P+ S+IQS+GRAR S++ +V
Sbjct: 443 KFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFILMV-- 500
Query: 539 GNQRELDLIKNFSKEEDRMNREIMD-----RTSSDAFTCSEERIYKVDSSGACISAGYGV 593
NQ + + E ++M EI+ + ++ ++ A ++ +
Sbjct: 501 PNQLKF---QKTQTEYNKMEEEIVKLLVDNDIDDENNDEKMTEVFHTETDRALLTHEIAI 557
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSM-----E 648
S+++RYC LP D F + P++Y + + + + PI+ ++ TP + +
Sbjct: 558 SIINRYCYSLPQDRFTDLSPEWYMAQNHNMSKKYKL---KLPINSVIKTPIDGLFCTNKK 614
Query: 649 AAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLF------SSDSDSYEGEGSR 700
AKK A A L+K+GAL++ L+P ++ A ++ F ++ Y+ +
Sbjct: 615 NAKKSAAFNACIALYKIGALDENLMPINIKNTAIFNDLKWFPHWDEGDVEATKYKLKAGT 674
Query: 701 GELHEML---VPAVLRQSWTKSQYPVRLNFYFMQFIPD----------PADRIYR---EF 744
++ M+ P L S+ + L + + +PD D++ R EF
Sbjct: 675 NKMKRMVHIESPTYLHGSYPQVNQSSYL--HVLHCVPDYIKLEESKYETFDKLLRSNEEF 732
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEF 804
G+ + LP + + + L + V + + +E+ + N F
Sbjct: 733 GILTSNKLP-QVSNFPIFLPFGNVNVSIEVNVEILYLDHKSHKEL-------ENFHNKLF 784
Query: 805 VP-LGKDDYCESS---SSTFYLLLPVIFHKN--SVDWKIIRRCLSSPVFGTPGGSVDRKS 858
V LG D+ S YL++P++ N +VDW +I +S V RKS
Sbjct: 785 VDVLGVKDFIARSYDNGDNSYLVVPILSTDNIYNVDWNVIN--VSKFVETEEPTMEQRKS 842
Query: 859 LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHL 918
+ + + +V + Y+VT++ ++ S + S+ ++ +
Sbjct: 843 -------KFYEEYLKTPNVISPWYRNIVPVQRYIVTDVYWDMTPESSFPTSEYDTYATYF 895
Query: 919 ISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC 971
Y I + H QP+++ K L + ++ + + EY + L PE C
Sbjct: 896 SDKYSIQVAHKNQPMIKVKSLGVSKINYLVPRISTGKIDKRSEYIEILVPEFC 948
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 215/475 (45%), Gaps = 89/475 (18%)
Query: 996 LENLLVAIELKHLLSASFPEGAEVSAEM-----------LLKALTTEKCQERFSLERLEI 1044
L+N+L + +L + S P+ + +S E+ +LK +T + F+ ER+E
Sbjct: 1116 LKNVLTEMNTLNLTNNSPPKLSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMET 1175
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP- 1103
GD+FLK+AV LF + +EG LT + V N NLL + NL Y+ FDP
Sbjct: 1176 YGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPN 1235
Query: 1104 ------CQFFALGRR-----------------CPR------ICSKETERTIHSQY----- 1129
C + + PR I S ET I ++
Sbjct: 1236 MDWIPPCFGVPIKLKEIIEEGNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKR 1295
Query: 1130 -------DGRAPDDLNAEVRCSKGHHWLHK-----KTIADVVEALVGAFIDDSGFKAATA 1177
D D + ++ S+ +LHK K +AD VE+L+G ++ G +
Sbjct: 1296 LSDMPISDSDEEDGI-PQIGHSQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFK 1354
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-------LEILLGHQFLHRGLLL 1230
L+ +GI Q + K L LD + LE +G+ F H+ LL
Sbjct: 1355 VLQGLGII----PKQFID-TFKPKPIDDLYDGLDFSKILPGYELLERRIGYSFKHKHLLA 1409
Query: 1231 QAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
QA HP++ CYQRLEFLGDA+LD+LIT+Y+ PG++TD+RS LVNN F
Sbjct: 1410 QALTHPTYQFGFSECYQRLEFLGDAILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITF 1469
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVD--------------YMITPSSTREVKEGPRC 1335
A+++ ++F++ S ++E I+ + + Y+I S E
Sbjct: 1470 ASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQEVLYLIEESDCY-AAESVDV 1528
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PKVLGDL ES + AI LD +LN VW I FL+ +K N+ NPIR L E
Sbjct: 1529 PKVLGDLFESLIAAIYLDCNRDLNFVWAICYRFLEKEIKEFCDNVPKNPIRILHE 1583
>gi|328696734|ref|XP_003240110.1| PREDICTED: endoribonuclease dcr-1-like isoform 3 [Acyrthosiphon
pisum]
Length = 1630
Score = 214 bits (545), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 239/1013 (23%), Positives = 432/1013 (42%), Gaps = 159/1013 (15%)
Query: 52 DKDPKQ----IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---Q 104
D+ PK + RKYQLEL + + N I+YL TG GKT+IA +L+ + + KP
Sbjct: 2 DQPPKDTSEIVPRKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQG 61
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIP 163
K F+ +V LV QQA + + + + TF G + S W + +++ +LVM
Sbjct: 62 KKWTFFIVQSVPLVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTA 121
Query: 164 QILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM--KVPRIFGMT 221
QI L L H ++ ++ LLIFDECHHA + HP+ +IM+ + D+ + PRI G+T
Sbjct: 122 QIYLNNLRHGYMHIKDANLLIFDECHHAV--ALHPFKQIMQVLHDTDLKTDERPRILGLT 179
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVIN 279
A+ + + + L K L+ +A + + D ++++ F + P +R+Y
Sbjct: 180 ATLINANTKNVKEELTK----LQITFNATIKTRYD-DNIQIFSARPKEFIRLY------- 227
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
Y+ E A +KR L T L ++ MK +E +
Sbjct: 228 ---DEYILDDEIKAIVKR----------------LNTNTCNLRKIQAPMK--IEPIKENN 266
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASD------ 393
+ + N ++ E N +D I ++ I +D
Sbjct: 267 ETYYLEYQKQASKNFANYFLDIEANLVDGGAYIAYLVTWHFMVEIEKKRKICTDAKRLTI 326
Query: 394 ----LSCIEVLKEPFF--------------------SKKLLRLIGILSTFRLQQHMKCIV 429
LS + + ++ + S KL +LI ILS+ +L C+V
Sbjct: 327 MSLVLSELTITRKMLYDYMNKHLIIHKGHSTKLHNTSPKLKKLIEILSSIKLTD--TCLV 384
Query: 430 FVNRIVTARALSYILQNLKFLASWR-----CHFLVGVNAGL----KSM--SRNAMKSILE 478
FV+R TA+ L + +++ ++ + C F+VG K M + I++
Sbjct: 385 FVDRRTTAKILYHYIKD--YIEEFNQVNIVCEFIVGARGIFSPDCKEMVYKKQQNNDIIK 442
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KF +N+L+ ++V EEG+DIQTC VIR+D P+ S+IQS+GRAR S++ +V
Sbjct: 443 KFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFILMV-- 500
Query: 539 GNQRELDLIKNFSKEEDRMNREIMD-----RTSSDAFTCSEERIYKVDSSGACISAGYGV 593
NQ + + E ++M EI+ + ++ ++ A ++ +
Sbjct: 501 PNQLKF---QKTQTEYNKMEEEIVKLLVDNDIDDENNDEKMTEVFHTETDRALLTHEIAI 557
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSM-----E 648
S+++RYC LP D F + P++Y + + + + PI+ ++ TP + +
Sbjct: 558 SIINRYCYSLPQDRFTDLSPEWYMAQNHNMSKKYKL---KLPINSVIKTPIDGLFCTNKK 614
Query: 649 AAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLF------SSDSDSYEGEGSR 700
AKK A A L+K+GAL++ L+P ++ A ++ F ++ Y+ +
Sbjct: 615 NAKKSAAFNACIALYKIGALDENLMPINIKNTAIFNDLKWFPHWDEGDVEATKYKLKAGT 674
Query: 701 GELHEML---VPAVLRQSWTKSQYPVRLNFYFMQFIPD----------PADRIYR---EF 744
++ M+ P L S+ + L + + +PD D++ R EF
Sbjct: 675 NKMKRMVHIESPTYLHGSYPQVNQSSYL--HVLHCVPDYIKLEESKYETFDKLLRSNEEF 732
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEF 804
G+ + LP + + + L + V + + +E+ + N F
Sbjct: 733 GILTSNKLP-QVSNFPIFLPFGNVNVSIEVNVEILYLDHKSHKEL-------ENFHNKLF 784
Query: 805 VP-LGKDDYCESS---SSTFYLLLPVIFHKN--SVDWKIIRRCLSSPVFGTPGGSVDRKS 858
V LG D+ S YL++P++ N +VDW +I +S V RKS
Sbjct: 785 VDVLGVKDFIARSYDNGDNSYLVVPILSTDNIYNVDWNVIN--VSKFVETEEPTMEQRKS 842
Query: 859 LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHL 918
+ + + +V + Y+VT++ ++ S + S+ ++ +
Sbjct: 843 -------KFYEEYLKTPNVISPWYRNIVPVQRYIVTDVYWDMTPESSFPTSEYDTYATYF 895
Query: 919 ISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC 971
Y I + H QP+++ K L + ++ + + EY + L PE C
Sbjct: 896 SDKYSIQVAHKNQPMIKVKSLGVSKINYLVPRISTGKIDKRSEYIEILVPEFC 948
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 215/475 (45%), Gaps = 89/475 (18%)
Query: 996 LENLLVAIELKHLLSASFPEGAEVSAEM-----------LLKALTTEKCQERFSLERLEI 1044
L+N+L + +L + S P+ + +S E+ +LK +T + F+ ER+E
Sbjct: 1098 LKNVLTEMNTLNLTNNSPPKLSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMET 1157
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP- 1103
GD+FLK+AV LF + +EG LT + V N NLL + NL Y+ FDP
Sbjct: 1158 YGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPN 1217
Query: 1104 ------CQFFALGRR-----------------CPR------ICSKETERTIHSQY----- 1129
C + + PR I S ET I ++
Sbjct: 1218 MDWIPPCFGVPIKLKEIIEEGNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKR 1277
Query: 1130 -------DGRAPDDLNAEVRCSKGHHWLHK-----KTIADVVEALVGAFIDDSGFKAATA 1177
D D + ++ S+ +LHK K +AD VE+L+G ++ G +
Sbjct: 1278 LSDMPISDSDEEDGI-PQIGHSQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFK 1336
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-------LEILLGHQFLHRGLLL 1230
L+ +GI Q + K L LD + LE +G+ F H+ LL
Sbjct: 1337 VLQGLGII----PKQFID-TFKPKPIDDLYDGLDFSKILPGYELLERRIGYSFKHKHLLA 1391
Query: 1231 QAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
QA HP++ CYQRLEFLGDA+LD+LIT+Y+ PG++TD+RS LVNN F
Sbjct: 1392 QALTHPTYQFGFSECYQRLEFLGDAILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITF 1451
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVD--------------YMITPSSTREVKEGPRC 1335
A+++ ++F++ S ++E I+ + + Y+I S E
Sbjct: 1452 ASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQEVLYLIEESDCY-AAESVDV 1510
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PKVLGDL ES + AI LD +LN VW I FL+ +K N+ NPIR L E
Sbjct: 1511 PKVLGDLFESLIAAIYLDCNRDLNFVWAICYRFLEKEIKEFCDNVPKNPIRILHE 1565
>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1453
Score = 214 bits (544), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 195/670 (29%), Positives = 301/670 (44%), Gaps = 94/670 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQLE+ ++M +NIIV + TG GKT +AVL I A L R + I FLAPTV+L
Sbjct: 70 SRAYQLEMFAESMRQNIIVAMDTGSGKTQVAVLRIK--AELERTATEQIVWFLAPTVSLC 127
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ V++ I F G + S D W+ + ++V QILL L H F+
Sbjct: 128 AQQLAVLKSQIPAVQIKFLSGDDNVDSWSDQAVWDAVLLNVRIVVSTYQILLDALSHAFV 187
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP---DIMKVPRIFGMTASPVVGKGASA 232
+ME ++L++FDE H+ KS P +KIM +FY P D +VP I G+TASP G
Sbjct: 188 RMERLSLIVFDEAHNCVGKS--PGSKIMTNFYHPHKRDERRVPHIMGLTASPTFGSKV-- 243
Query: 233 QANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+SIN LE+ LDA + +DL + V P + ++ P
Sbjct: 244 -----ESINVLESTLDAVCKTPTMHRDDLLACVKKPELTFVEFLP--------------- 283
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
+ Y R Q+LRN + L+ D L+ G + + +L
Sbjct: 284 -----KPDY-----RTPKSLQTLRNAIRSLDISEDPFVLHLQAEGTDRSKRELFAVLESH 333
Query: 352 ETMRNELIEAEGNTIDDSLCR-FASQASE--VFAAICRRD-GIASDLSCIEVLKE----- 402
+T + + + G + +CR A+E ++ I R D + S +E KE
Sbjct: 334 DTYVHNQMTSFGRQA-NQICRELGPWAAEYYIWEVITRFDSAVRSQSRWLEAWKEDEKKY 392
Query: 403 --------------------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSY 442
S+K+ LI L F+ + + IVF T L +
Sbjct: 393 LGKILGQIECRRPSPTEISRDVLSEKVFILIEQL--FQDKVDITGIVFAKERATVAVLGH 450
Query: 443 ILQNLKFL-ASWRCHFLVGVNA------GLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
+L + + L A +R ++G + + +SR L +FRSG++NLL+AT V E
Sbjct: 451 LLTSHEALRAKYRVGAMMGTSQYQARKRDIWDLSRTEDLQSLHQFRSGKINLLIATSVLE 510
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG---NQRELDLIKNFSK 552
EG+D+ C LVI FD P + SFIQ RGRARM S+ L+D +Q + +
Sbjct: 511 EGIDVPACNLVICFDRPPNLKSFIQRRGRARMRDSKLLMLLDRSETFSQEWESMEAEMKR 570
Query: 553 EEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
+ ++ RE+ + + + V+++GA + S L +C L EF + +
Sbjct: 571 QYEQQERELEHLQQIEEAEELADMQFNVETTGALLDLDIAKSHLDHFCRILSPGEFIDWR 630
Query: 613 PKFYYFDDLGGTIC-----HIILPANAPIHQIVGTPQSSMEAAK---KDACLKAIEDLHK 664
P Y L T ++LP+ P +S+ ++ K KDA +A L++
Sbjct: 631 PD-YILKKLDNTDAPDLRYTVVLPSYLPAEVRSAESKSTWKSEKNAMKDAAFQAYVALYR 689
Query: 665 LGALNDYLLP 674
G +ND LLP
Sbjct: 690 AGLVNDNLLP 699
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 154/320 (48%), Gaps = 41/320 (12%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSI+HR+E LVA EL L A ++ A++ E + ERLE LGD
Sbjct: 946 LIPSILHRIETCLVAKELSTTLLRPL---AIDDWSLVHTAISAGSAAEPTNYERLEFLGD 1002
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK++ ++ L+ E L+ ++ + V NS L K A ++ L +I +PF
Sbjct: 1003 SILKFSATINVAALNPDWPERLLSFKKDSIVANSTLCKAAIKHGLDRFILTKPF------ 1056
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ + R I+ + + +D + R S KT+AD+VEAL+GA +
Sbjct: 1057 ----------TGQKWRPIYVEDVLKRGEDTSTR-RIST-------KTLADIVEALIGASM 1098
Query: 1168 DDSG--------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
D G + FL+ I + + Q+ LP + + LE L+
Sbjct: 1099 IDGGEDGGLSKALDCMSIFLQQIKWRRIDDCRQLLYDVAPDNVELPST----LKPLEELI 1154
Query: 1220 GHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LL+Q+ H S F GC +RLEF+GDAVLDY+I + L+S+ P L +
Sbjct: 1155 GYDFDKKSLLIQSMTHASSNFGNPLGCLERLEFIGDAVLDYIIVNRLFSIRPHLSHQSMH 1214
Query: 1278 DLRSMLVNNQAFANVAVDQS 1297
L++ +VN ++++QS
Sbjct: 1215 LLKTAVVNGDFLGFLSLEQS 1234
Score = 44.7 bits (104), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+RLEFLGD++L + T + ++ P L+ + +V N A+ +F++
Sbjct: 994 YERLEFLGDSILKFSATINVAALNPDWPERLLSFKKDSIVANSTLCKAAIKHGLDRFILT 1053
Query: 1305 DSNVLSETINNYVDYMIT---PSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
+ YV+ ++ +STR + K L D+VE+ +GA ++D G
Sbjct: 1054 KPFTGQKWRPIYVEDVLKRGEDTSTRRIST-----KTLADIVEALIGASMIDGG 1102
>gi|238814324|ref|NP_001154925.1| endoribonuclease Dicer [Danio rerio]
gi|229485378|sp|Q6TV19.2|DICER_DANRE RecName: Full=Endoribonuclease Dicer
Length = 1865
Score = 214 bits (544), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 275/1084 (25%), Positives = 435/1084 (40%), Gaps = 172/1084 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
RKYQ+EL + A+E N IV L TG GKT IAVLLI EL+H IR +FL + V
Sbjct: 35 RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGENGKRTVFLVNAASSVA 94
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
QQA + +V + W +E+ + +VLVM I L+ L + + +
Sbjct: 95 QQASTVRTHSDLQVGDYMSEDMTSWPEEMWNREMIENQVLVMTCHIFLHVLKNGVLPLSK 154
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKS 239
I LL+FDECH A + HPY +IMK PRI G+TAS + GK +L +
Sbjct: 155 INLLVFDECHLA--ITGHPYREIMK--ICEGCPSCPRILGLTASILNGK--CDPCDLEEK 208
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQ 299
I +LE +L + + D L+ + S P V G + + SE+L E
Sbjct: 209 IQNLEKILQSNAETATDLVVLDRYASQPREEVLDCGQYQDQSG-----LSERLLNELDEA 263
Query: 300 YISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELI 359
L H+ R+ T ++ + + L LG A A+ I++ + + I
Sbjct: 264 LNFLNDCNLSVHREDRDPTFISKQVLNDCRAVLTVLGPWCADKAAGIMVRELQ----KYI 319
Query: 360 EAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--- 416
+ E ++ F A+C + L LK F + K++RL+ IL
Sbjct: 320 KHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLD----LK--FVTPKVIRLLEILHEY 373
Query: 417 STFRLQQHMKCIVFVNR------------------------------------------I 434
F QQ + NR
Sbjct: 374 KPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKTEANFPSPFTNILCGIIF 433
Query: 435 VTARALSYILQNL--------KFLASWRCHFLVGVNAGLKSMSRN--------AMKSILE 478
V R + +L L LA +F+ G + G K+ RN + +L
Sbjct: 434 VERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG-KNQPRNKQMEVEFRKQEEVLR 492
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L DS
Sbjct: 493 KFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYIMLADS 552
Query: 539 GN----QRELDLIKNF--------SKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
Q +L K SK + + E+ T D + + + G
Sbjct: 553 ERTKTFQEDLKTYKAIEKILRNKCSKSAECNDFELEPVTDDDNVL--PPYVLRSEDGGPR 610
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTICHIILPANAPIH-QIVGTPQ 644
++ + ++RYC++LP D F + PK + + GG + LP N+P+ + G
Sbjct: 611 VTMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRSTLFLPINSPLRVPVTGPVM 670
Query: 645 SSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEGS 699
+ A+K L E LHK+G L+D+L+P + D + G
Sbjct: 671 NCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTK 730
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADRIYREFGL 746
R + +P LR + + P L M +PD P + R FG+
Sbjct: 731 RRQCSPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGI 790
Query: 747 FVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGI-MQAQQFQ------EMFLKVILDRS 798
+P H V + G ++ +L SG + A+Q + + IL
Sbjct: 791 LTAKPIP-RIPHFPV--YTRSGEVTISIELQKSGFSLSAEQLELITRLHQYIFSHILRLE 847
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV-FGTPGGS 853
+ EF P+ D + Y +LP+ ++S +D+K + S G P
Sbjct: 848 KPALEFKPVEAD--------SAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQ 899
Query: 854 VDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKD 908
+++ P L+ D +++++ ++ + FY V ++ + S +
Sbjct: 900 YTKQN-PFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDLTPLSKFPS 948
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELEE 961
+ + ++ + Y + L + QPLL NLL R L S + + +
Sbjct: 949 PEYETFAEYYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKA 1008
Query: 962 YFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPE 1015
++ L PELC + I S + LPSI++RL LL A EL+ +
Sbjct: 1009 KWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGV 1066
Query: 1016 GAEV 1019
GA+
Sbjct: 1067 GAQT 1070
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSFLPLSAS 1209
K+IAD VEAL+G ++ G +AA FL +G++V E ++S + +P
Sbjct: 1533 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPPRCM 1592
Query: 1210 LDMATLEILLGH--------------QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
+ E L H F ++ LLQAF H S+ N + CYQRLEFLGD
Sbjct: 1593 FEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGD 1652
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
A+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 1653 AILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVI 1712
Query: 1314 NNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAILLDSGFNLNT 1360
+++V + + + + + R PK +GD+ ES GAI +DSG +L T
Sbjct: 1713 DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLET 1772
Query: 1361 VWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1773 VWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1803
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1278 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1337
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1338 LYRLGKKKGLPSRMVVSIFDP 1358
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1277 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1335
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1645 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1702
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1703 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1750
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1751 MGDIFESLAGAIYMDSGMSLETVW 1774
>gi|270015102|gb|EFA11550.1| dicer-1 [Tribolium castaneum]
Length = 1835
Score = 214 bits (544), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 216/425 (50%), Gaps = 60/425 (14%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ ++ V EG+L+ RS V+
Sbjct: 1351 SPNVLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVS 1410
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY--------DG 1131
N NL +L R L Y+ FDP + C + + E I +Q+ D
Sbjct: 1411 NLNLYRLGRRKGLGEYMIATKFDPHDNWLPP--CFYVPKELEEALIDAQFPANCWTVADM 1468
Query: 1132 RAPDDLNAEVRCS----KG---------------HHWLHKKTIADVVEALVGAFIDDSGF 1172
A D+ + CS +G H + K+IAD VEAL+GA++ + G
Sbjct: 1469 AATRDMTLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGP 1528
Query: 1173 KAATAFLKWIGIQV--EFEASQVTNICISSKSFLPLS-------ASLDMA-----TLEIL 1218
+ A F+ W+GI+V + E I + PLS LDM E
Sbjct: 1529 RGALLFMAWLGIRVLPQLEDGTYGEIELPKS---PLSNHLTYPREELDMLLDGYDQFERH 1585
Query: 1219 LGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQL 1276
+G++F R LLQA H SF N L CYQRLEFLGDAVLDYLIT +LY PG L
Sbjct: 1586 IGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGAL 1645
Query: 1277 TDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST---------- 1326
TDLRS LVNN FA++AV F+++ S L+E + +V T
Sbjct: 1646 TDLRSALVNNTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHTLVDELYLVVE 1705
Query: 1327 REVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFSN-LQLNPIR 1384
E E PK LGD+ ES GAI LDSG +L+ VWK+ + + I +FSN + +PIR
Sbjct: 1706 TEEVEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPIR 1765
Query: 1385 ELLEL 1389
ELLEL
Sbjct: 1766 ELLEL 1770
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 234/1069 (21%), Positives = 430/1069 (40%), Gaps = 171/1069 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFL--APTVAL 117
R+YQ+EL A + N IV K I + L+ E +H +R P +F+ P V +
Sbjct: 17 REYQVELLDSAKKRNTIVCSSASSAKAFITIKLLQEFSHKMRVPHGKQALFVLDGPNVPI 76
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+ K++ + T K + + V+V ++ + F+ +
Sbjct: 77 MTSHVKLLTD------LTVTSIDKE-----ENPPSLKASNVIVTTAEVCVLLCKKNFVHL 125
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN-L 236
+ AL++ D + Q + + Y+ PRI G+TA + G+ Q + L
Sbjct: 126 DSYALIVIDCLYGGQ----QSLVREIMARYQAIQAPRPRILGLTAGLL---GSEMQPDRL 178
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY-----GPVINDTSSSYVTCSEQ 291
+ LE LL + V + + L P R+ + P+ + ++ +C +
Sbjct: 179 EAELQRLEKLLSSSVDTSSEILTLIRLSCRPRERIVECFKPIPSPLQDKIKATITSCQDF 238
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
L + + + L + + + + +Q D L++LG A A+Y +L
Sbjct: 239 LKDHRYDPSEIYDDDLLEEFKQVPDPKEQPLSFFDDFLEILDDLGPWSADRAAYGMLIKI 298
Query: 352 ETMRNEL------------------------IEAEGNTIDDSLCRFASQASEVFAAICRR 387
E ++ ++ +E + T + + RF++ F + ++
Sbjct: 299 EKLKVKVPYERHYLLLCVASSVLVSIRALCELEFQDYTDKEKVFRFSTPKVLRFLQVLKQ 358
Query: 388 DGIASDL--SCIEV--LKEPFFSKKLLRLIG---ILSTFRLQQHMKCIVFVNRIVTARAL 440
D +C ++ LK+P K +S + + + +VFV A AL
Sbjct: 359 FKPTGDKPETCDKLPDLKDPKKGKGKNYKGPRRPYISRAQSDEMLCALVFVKNRYKAEAL 418
Query: 441 SYILQNLKFLASWRCHFLVGVNAGLKSMS------RNA------MKSILEKFRSGELNLL 488
+L + S ++ V V+ + ++ R A + +L K+RS E N++
Sbjct: 419 FALLCVMS--KSDEEYWWVSVSFSVNKIADPVREPREAESEHKRQEEVLRKYRSHECNIM 476
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG--------- 539
+AT E+G D+ C LVIRFDLP++ S+I S+ RAR ++ + L +
Sbjct: 477 IATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKARARANEAHFLLLANENEVSDFVENL 536
Query: 540 ---NQRELDLIKN-FSKEEDRMNREIMDRTSSDAFTCSEERIYK--VDSSGACISAGYGV 593
N+ E L+K +S E D+ N E++ SS C R Y+ + +S +
Sbjct: 537 AEYNEVENTLLKRCYSLEPDK-NEELVADASS--LQC---RPYQPSAEPGANSVSLSNAI 590
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS-SMEAAKK 652
+L++RYC+KLP D F P ++ G IC I LP N+P+ + V +P + A++
Sbjct: 591 ALVNRYCAKLPSDTFTRLTPIWHEEKVENGYICSIRLPINSPVKKTVTSPPMINTLLARR 650
Query: 653 DACLKAIEDLHKLGALNDYLLP--QEDNATEDE----PMLFSSDS---DSYEGEGSRGEL 703
A + LHK G L+D L P +E+ +E L SD D G R +
Sbjct: 651 AAAFMICQLLHKAGELDDNLQPIGKENFKVNEEDWNSSALEESDEENLDPRPGTTKRRQY 710
Query: 704 HEMLVPAVLRQSWTKSQYPVRLNFYFMQFI-PDPAD------RIY------REFGLFVKS 750
+ V L P M+ P P + +IY + FG+
Sbjct: 711 YYKKVADALLDCHPIIGQPTYFYKIVMKLTCPLPEEQNTRGRKIYPPEDSPQGFGILTSK 770
Query: 751 LLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNS 802
+P + + VDL L + ++T+ + I + ++F +L ++ +
Sbjct: 771 EIPKISAFPIFTRSGEVSVDLQLC-SQLIVTE---NQICKIREFLNYTFTSVLRLQKYLT 826
Query: 803 EFVPLGKDDYCESSSSTFYLLLPVI-FHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPS 861
F P +S+ YL++P I +VDW I ++ LP
Sbjct: 827 LFNP--------DASANSYLIVPTIDGATTTVDWDFIDLIYANLTV-----------LPE 867
Query: 862 HGPLQLHNGWSSESD-VENSLVYATHK-----KWFYLVTNIVFEKNGYSPYKDSDSSSHV 915
P ++ + + + +++V ++ ++FY V I N S + SD ++
Sbjct: 868 IIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQPQYFY-VAEICSNLNPASDFPGSDYATFE 926
Query: 916 DHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK----------LEDSESHELEE 961
++ + Y I +++ Q LL N L NRK + ++ +LE+
Sbjct: 927 EYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTPRYVNRKGVALPTSSEATKRAKREKLEQ 986
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
L PELC I FS + LP I++R+ LL+A +++ ++
Sbjct: 987 K-QILVPELC--AIHPFSASLWRKAVCLPCILYRINALLLADQIRRTVA 1032
Score = 47.8 bits (112), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L+ H +LLQA + N G +RLE +GD+ L Y IT+YLYS Y + G+L+
Sbjct: 1344 LVEHPGPSPNVLLQALTMSNAND-GINLERLETIGDSFLKYAITNYLYSKYENVHEGKLS 1402
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1403 HLRSKQVSN 1411
>gi|41469334|gb|AAS07190.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 538
Score = 213 bits (543), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 258/555 (46%), Gaps = 63/555 (11%)
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRS 482
Q ++CIVFV R++T+ L ++L ++ ++ W + G GL S SR I+E FR
Sbjct: 3 QDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRK 62
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
G++++++AT++ EEGLD+ +C LVIRFD TV SFIQSRGRARM S+Y LV G+
Sbjct: 63 GKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGDVE 122
Query: 543 ELDLIKNFSKEEDRMNREIMDRTSSDA----FTCSEERIYKVDSSGACISAGYGVSLLHR 598
+ F M E + S T E+ Y+V+S+ A ++ V L+H
Sbjct: 123 AQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLIHF 182
Query: 599 YCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
+CSKLP DE+FNP P+F D GT C + LP ++P+ + + S+ K+ CLKA
Sbjct: 183 FCSKLPSDEYFNPLPRF-DIDKASGT-CTLHLPKSSPVQTVNVEGEGSI--LKETVCLKA 238
Query: 659 IEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTK 718
++LH +GAL D LLP+ D ++EP + + P +W
Sbjct: 239 CQELHAIGALTDSLLPELDVPCDEEPDIVVENKIE----------QPSYFPEEFVDNWRS 288
Query: 719 SQYPVRLNFYF-----MQFIPDPADRIYREFGL-------FVKS--LLPGEAEHLKVDLH 764
RL Y+ ++ P A L F S LPG ++ V +
Sbjct: 289 FS---RLGIYYCYKISLEGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMK 345
Query: 765 LARGRSVMTKLVPSGIMQAQQFQEMFLKVIL--DRSE-------FNSEFVPLGKDDYCES 815
+ L ++ A++FQ L ++ D E F+ VP+G
Sbjct: 346 YVG----IIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIG------- 394
Query: 816 SSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDR-KSLPSHGPLQLHNGWSSE 874
YLLLP++ +DW ++ SSP++ + S LQ +G
Sbjct: 395 ---VVYLLLPLV--SGRIDWCSMKFS-SSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCR 448
Query: 875 SDVENSLVYATHKKWFYLVTNIV-FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPL 933
++NS+V H FY+++ + + N P D ++ D+ + +G+ L QPL
Sbjct: 449 CILKNSIVCTPHNNIFYVISGFLDLDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPL 508
Query: 934 LRAKPLFRLRNLLHN 948
L ++RN LHN
Sbjct: 509 LAGSKHVKVRNFLHN 523
>gi|328696732|ref|XP_001945890.2| PREDICTED: endoribonuclease dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1691
Score = 213 bits (543), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 239/1013 (23%), Positives = 432/1013 (42%), Gaps = 159/1013 (15%)
Query: 52 DKDPKQ----IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---Q 104
D+ PK + RKYQLEL + + N I+YL TG GKT+IA +L+ + + KP
Sbjct: 2 DQPPKDTSEIVPRKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQG 61
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIP 163
K F+ +V LV QQA + + + + TF G + S W + +++ +LVM
Sbjct: 62 KKWTFFIVQSVPLVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTA 121
Query: 164 QILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM--KVPRIFGMT 221
QI L L H ++ ++ LLIFDECHHA + HP+ +IM+ + D+ + PRI G+T
Sbjct: 122 QIYLNNLRHGYMHIKDANLLIFDECHHAV--ALHPFKQIMQVLHDTDLKTDERPRILGLT 179
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVIN 279
A+ + + + L K L+ +A + + D ++++ F + P +R+Y
Sbjct: 180 ATLINANTKNVKEELTK----LQITFNATIKTRYD-DNIQIFSARPKEFIRLY------- 227
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
Y+ E A +KR L T L ++ MK +E +
Sbjct: 228 ---DEYILDDEIKAIVKR----------------LNTNTCNLRKIQAPMK--IEPIKENN 266
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASD------ 393
+ + N ++ E N +D I ++ I +D
Sbjct: 267 ETYYLEYQKQASKNFANYFLDIEANLVDGGAYIAYLVTWHFMVEIEKKRKICTDAKRLTI 326
Query: 394 ----LSCIEVLKEPFF--------------------SKKLLRLIGILSTFRLQQHMKCIV 429
LS + + ++ + S KL +LI ILS+ +L C+V
Sbjct: 327 MSLVLSELTITRKMLYDYMNKHLIIHKGHSTKLHNTSPKLKKLIEILSSIKLTD--TCLV 384
Query: 430 FVNRIVTARALSYILQNLKFLASWR-----CHFLVGVNA----GLKSM--SRNAMKSILE 478
FV+R TA+ L + +++ ++ + C F+VG K M + I++
Sbjct: 385 FVDRRTTAKILYHYIKD--YIEEFNQVNIVCEFIVGARGIFSPDCKEMVYKKQQNNDIIK 442
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KF +N+L+ ++V EEG+DIQTC VIR+D P+ S+IQS+GRAR S++ +V
Sbjct: 443 KFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFILMV-- 500
Query: 539 GNQRELDLIKNFSKEEDRMNREIMD-----RTSSDAFTCSEERIYKVDSSGACISAGYGV 593
NQ + + E ++M EI+ + ++ ++ A ++ +
Sbjct: 501 PNQLKF---QKTQTEYNKMEEEIVKLLVDNDIDDENNDEKMTEVFHTETDRALLTHEIAI 557
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSM-----E 648
S+++RYC LP D F + P++Y + + + + PI+ ++ TP + +
Sbjct: 558 SIINRYCYSLPQDRFTDLSPEWYMAQNHNMSKKYKL---KLPINSVIKTPIDGLFCTNKK 614
Query: 649 AAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLF------SSDSDSYEGEGSR 700
AKK A A L+K+GAL++ L+P ++ A ++ F ++ Y+ +
Sbjct: 615 NAKKSAAFNACIALYKIGALDENLMPINIKNTAIFNDLKWFPHWDEGDVEATKYKLKAGT 674
Query: 701 GELHEML---VPAVLRQSWTKSQYPVRLNFYFMQFIPD----------PADRIYR---EF 744
++ M+ P L S+ + L + + +PD D++ R EF
Sbjct: 675 NKMKRMVHIESPTYLHGSYPQVNQSSYL--HVLHCVPDYIKLEESKYETFDKLLRSNEEF 732
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEF 804
G+ + LP + + + L + V + + +E+ + N F
Sbjct: 733 GILTSNKLP-QVSNFPIFLPFGNVNVSIEVNVEILYLDHKSHKEL-------ENFHNKLF 784
Query: 805 VP-LGKDDYCESS---SSTFYLLLPVIFHKN--SVDWKIIRRCLSSPVFGTPGGSVDRKS 858
V LG D+ S YL++P++ N +VDW +I +S V RKS
Sbjct: 785 VDVLGVKDFIARSYDNGDNSYLVVPILSTDNIYNVDWNVIN--VSKFVETEEPTMEQRKS 842
Query: 859 LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHL 918
+ + + +V + Y+VT++ ++ S + S+ ++ +
Sbjct: 843 -------KFYEEYLKTPNVISPWYRNIVPVQRYIVTDVYWDMTPESSFPTSEYDTYATYF 895
Query: 919 ISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC 971
Y I + H QP+++ K L + ++ + + EY + L PE C
Sbjct: 896 SDKYSIQVAHKNQPMIKVKSLGVSKINYLVPRISTGKIDKRSEYIEILVPEFC 948
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 145/475 (30%), Positives = 215/475 (45%), Gaps = 89/475 (18%)
Query: 996 LENLLVAIELKHLLSASFPEGAEVSAEM-----------LLKALTTEKCQERFSLERLEI 1044
L+N+L + +L + S P+ + +S E+ +LK +T + F+ ER+E
Sbjct: 1159 LKNVLTEMNTLNLTNNSPPKLSSLSIEVSKQNIGPKQSDILKVITPPFANDMFNYERMET 1218
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP- 1103
GD+FLK+AV LF + +EG LT + V N NLL + NL Y+ FDP
Sbjct: 1219 YGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKLVGNRNLLYVGRNLNLGSYLVVNVFDPN 1278
Query: 1104 ------CQFFALGRR-----------------CPR------ICSKETERTIHSQY----- 1129
C + + PR I S ET I ++
Sbjct: 1279 MDWIPPCFGVPIKLKEIIEEGNFQSDVLHQITIPRDNQTTGILSDETWIEIETELLKFKR 1338
Query: 1130 -------DGRAPDDLNAEVRCSKGHHWLHK-----KTIADVVEALVGAFIDDSGFKAATA 1177
D D + ++ S+ +LHK K +AD VE+L+G ++ G +
Sbjct: 1339 LSDMPISDSDEEDGI-PQIGHSQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFK 1397
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-------LEILLGHQFLHRGLLL 1230
L+ +GI Q + K L LD + LE +G+ F H+ LL
Sbjct: 1398 VLQGLGII----PKQFID-TFKPKPIDDLYDGLDFSKILPGYELLERRIGYSFKHKHLLA 1452
Query: 1231 QAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
QA HP++ CYQRLEFLGDA+LD+LIT+Y+ PG++TD+RS LVNN F
Sbjct: 1453 QALTHPTYQFGFSECYQRLEFLGDAILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITF 1512
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVD--------------YMITPSSTREVKEGPRC 1335
A+++ ++F++ S ++E I+ + + Y+I S E
Sbjct: 1513 ASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQEVLYLIEESDCY-AAESVDV 1571
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PKVLGDL ES + AI LD +LN VW I FL+ +K N+ NPIR L E
Sbjct: 1572 PKVLGDLFESLIAAIYLDCNRDLNFVWAICYRFLEKEIKEFCDNVPKNPIRILHE 1626
>gi|189234048|ref|XP_968993.2| PREDICTED: Dicer-1 [Tribolium castaneum]
Length = 1865
Score = 213 bits (542), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 216/425 (50%), Gaps = 60/425 (14%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ ++ V EG+L+ RS V+
Sbjct: 1381 SPNVLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVS 1440
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY--------DG 1131
N NL +L R L Y+ FDP + C + + E I +Q+ D
Sbjct: 1441 NLNLYRLGRRKGLGEYMIATKFDPHDNWLPP--CFYVPKELEEALIDAQFPANCWTVADM 1498
Query: 1132 RAPDDLNAEVRCS----KG---------------HHWLHKKTIADVVEALVGAFIDDSGF 1172
A D+ + CS +G H + K+IAD VEAL+GA++ + G
Sbjct: 1499 AATRDMTLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEALIGAYLIECGP 1558
Query: 1173 KAATAFLKWIGIQV--EFEASQVTNICISSKSFLPLS-------ASLDMA-----TLEIL 1218
+ A F+ W+GI+V + E I + PLS LDM E
Sbjct: 1559 RGALLFMAWLGIRVLPQLEDGTYGEIELPKS---PLSNHLTYPREELDMLLDGYDQFERH 1615
Query: 1219 LGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQL 1276
+G++F R LLQA H SF N L CYQRLEFLGDAVLDYLIT +LY PG L
Sbjct: 1616 IGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGAL 1675
Query: 1277 TDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST---------- 1326
TDLRS LVNN FA++AV F+++ S L+E + +V T
Sbjct: 1676 TDLRSALVNNTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHTLVDELYLVVE 1735
Query: 1327 REVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFSN-LQLNPIR 1384
E E PK LGD+ ES GAI LDSG +L+ VWK+ + + I +FSN + +PIR
Sbjct: 1736 TEEVEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNKVPKSPIR 1795
Query: 1385 ELLEL 1389
ELLEL
Sbjct: 1796 ELLEL 1800
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 234/1069 (21%), Positives = 430/1069 (40%), Gaps = 171/1069 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFL--APTVAL 117
R+YQ+EL A + N IV K I + L+ E +H +R P +F+ P V +
Sbjct: 17 REYQVELLDSAKKRNTIVCSSASSAKAFITIKLLQEFSHKMRVPHGKQALFVLDGPNVPI 76
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+ K++ + T K + + V+V ++ + F+ +
Sbjct: 77 MTSHVKLLTD------LTVTSIDKE-----ENPPSLKASNVIVTTAEVCVLLCKKNFVHL 125
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN-L 236
+ AL++ D + Q + + Y+ PRI G+TA + G+ Q + L
Sbjct: 126 DSYALIVIDCLYGGQ----QSLVREIMARYQAIQAPRPRILGLTAGLL---GSEMQPDRL 178
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY-----GPVINDTSSSYVTCSEQ 291
+ LE LL + V + + L P R+ + P+ + ++ +C +
Sbjct: 179 EAELQRLEKLLSSSVDTSSEILTLIRLSCRPRERIVECFKPIPSPLQDKIKATITSCQDF 238
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
L + + + L + + + + +Q D L++LG A A+Y +L
Sbjct: 239 LKDHRYDPSEIYDDDLLEEFKQVPDPKEQPLSFFDDFLEILDDLGPWSADRAAYGMLIKI 298
Query: 352 ETMRNEL------------------------IEAEGNTIDDSLCRFASQASEVFAAICRR 387
E ++ ++ +E + T + + RF++ F + ++
Sbjct: 299 EKLKVKVPYERHYLLLCVASSVLVSIRALCELEFQDYTDKEKVFRFSTPKVLRFLQVLKQ 358
Query: 388 DGIASDL--SCIEV--LKEPFFSKKLLRLIG---ILSTFRLQQHMKCIVFVNRIVTARAL 440
D +C ++ LK+P K +S + + + +VFV A AL
Sbjct: 359 FKPTGDKPETCDKLPDLKDPKKGKGKNYKGPRRPYISRAQSDEMLCALVFVKNRYKAEAL 418
Query: 441 SYILQNLKFLASWRCHFLVGVNAGLKSMS------RNA------MKSILEKFRSGELNLL 488
+L + S ++ V V+ + ++ R A + +L K+RS E N++
Sbjct: 419 FALLCVMS--KSDEEYWWVSVSFSVNKIADPVREPREAESEHKRQEEVLRKYRSHECNIM 476
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG--------- 539
+AT E+G D+ C LVIRFDLP++ S+I S+ RAR ++ + L +
Sbjct: 477 IATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKARARANEAHFLLLANENEVSDFVENL 536
Query: 540 ---NQRELDLIKN-FSKEEDRMNREIMDRTSSDAFTCSEERIYK--VDSSGACISAGYGV 593
N+ E L+K +S E D+ N E++ SS C R Y+ + +S +
Sbjct: 537 AEYNEVENTLLKRCYSLEPDK-NEELVADASS--LQC---RPYQPSAEPGANSVSLSNAI 590
Query: 594 SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS-SMEAAKK 652
+L++RYC+KLP D F P ++ G IC I LP N+P+ + V +P + A++
Sbjct: 591 ALVNRYCAKLPSDTFTRLTPIWHEEKVENGYICSIRLPINSPVKKTVTSPPMINTLLARR 650
Query: 653 DACLKAIEDLHKLGALNDYLLP--QEDNATEDE----PMLFSSDS---DSYEGEGSRGEL 703
A + LHK G L+D L P +E+ +E L SD D G R +
Sbjct: 651 AAAFMICQLLHKAGELDDNLQPIGKENFKVNEEDWNSSALEESDEENLDPRPGTTKRRQY 710
Query: 704 HEMLVPAVLRQSWTKSQYPVRLNFYFMQFI-PDPAD------RIY------REFGLFVKS 750
+ V L P M+ P P + +IY + FG+
Sbjct: 711 YYKKVADALLDCHPIIGQPTYFYKIVMKLTCPLPEEQNTRGRKIYPPEDSPQGFGILTSK 770
Query: 751 LLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNS 802
+P + + VDL L + ++T+ + I + ++F +L ++ +
Sbjct: 771 EIPKISAFPIFTRSGEVSVDLQLC-SQLIVTE---NQICKIREFLNYTFTSVLRLQKYLT 826
Query: 803 EFVPLGKDDYCESSSSTFYLLLPVI-FHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPS 861
F P +S+ YL++P I +VDW I ++ LP
Sbjct: 827 LFNP--------DASANSYLIVPTIDGATTTVDWDFIDLIYANLTV-----------LPE 867
Query: 862 HGPLQLHNGWSSESD-VENSLVYATHK-----KWFYLVTNIVFEKNGYSPYKDSDSSSHV 915
P ++ + + + +++V ++ ++FY V I N S + SD ++
Sbjct: 868 IIPEEVRKSYEFDPEKYRDAVVMPWYRNQDQPQYFY-VAEICSNLNPASDFPGSDYATFE 926
Query: 916 DHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK----------LEDSESHELEE 961
++ + Y I +++ Q LL N L NRK + ++ +LE+
Sbjct: 927 EYYLRKYSIQIQNKSQHLLDVDHTSARLNFLTPRYVNRKGVALPTSSEATKRAKREKLEQ 986
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
L PELC I FS + LP I++R+ LL+A +++ ++
Sbjct: 987 K-QILVPELC--AIHPFSASLWRKAVCLPCILYRINALLLADQIRRTVA 1032
Score = 47.8 bits (112), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L+ H +LLQA + N G +RLE +GD+ L Y IT+YLYS Y + G+L+
Sbjct: 1374 LVEHPGPSPNVLLQALTMSNAND-GINLERLETIGDSFLKYAITNYLYSKYENVHEGKLS 1432
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1433 HLRSKQVSN 1441
>gi|195443910|ref|XP_002069632.1| GK11626 [Drosophila willistoni]
gi|194165717|gb|EDW80618.1| GK11626 [Drosophila willistoni]
Length = 2281
Score = 213 bits (541), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 255/544 (46%), Gaps = 119/544 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1747 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1806
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1807 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1866
Query: 1115 -------RICS--KETERTIHSQYDGRAP-----DDLNAEVRCSK----------GHHWL 1150
+IC +E + D RAP DD N C+ H +
Sbjct: 1867 IKNLSSVQICELVREKAEALGLGIDQRAPNGHQLDDSNES--CNDFSCFIPYNLVSQHSI 1924
Query: 1151 HKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------EFEASQVTNICI 1198
K+IAD VEAL+GA++ + G + A F+ W+GI+V E E+++ I
Sbjct: 1925 PDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPYTKQTANTLPEIESNEQQRIPG 1984
Query: 1199 SSKS------------------FLPLS--ASLDMATL-------EILLGHQFLHRGLLLQ 1231
S+K LP + AS ++ L E +LG++F R LLQ
Sbjct: 1985 STKPDSKNTTVVYGKWPTPRSPLLPFAPNASDELEHLLSGFEEFEAILGYRFRDRSYLLQ 2044
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
A H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN F
Sbjct: 2045 AMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIF 2104
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPK 1337
A++AV F+KF S L++ I+ +V +Y + + E PK
Sbjct: 2105 ASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPK 2164
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDL 1395
LGD+ ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL
Sbjct: 2165 ALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMKPEIEQFSNSVPKSPIRELLEL------ 2218
Query: 1396 DLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAG 1451
P K GK LA+ + DVF + R I A++ +LK G
Sbjct: 2219 ---EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQG 2275
Query: 1452 YVPK 1455
+ K
Sbjct: 2276 LIAK 2279
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 506 LIYCNQNHTARVLFELLAEMSRRDADLKFL---RCQYTTDRVADPATEPKEAELEHRRQE 562
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + NLL+AT V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 563 EVLKRFRMHDCNLLIATSVLEEGIDVPKCNLVLRWDPPTTYRSYVQCKGRARAAPAYHVM 622
Query: 535 LV 536
LV
Sbjct: 623 LV 624
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 199/498 (39%), Gaps = 85/498 (17%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ I LP N+P+ H
Sbjct: 826 TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCASTERNGITLYQYTIRLPINSPLKH 885
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QE------------DNATEDE 683
IVG P + A++ A L+ +LHK+G L+D L P +E D EDE
Sbjct: 886 DIVGLPMPTQTLARRLAALQTCVELHKIGELDDELQPIGKEGFRALESDWECFDLEPEDE 945
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ +D + G R + + V + + P L YF+Q IP+
Sbjct: 946 HIVQLTD-EPRPGTTKRRQYYYKRVASEFCNCRPVAGQPCYL--YFIQLTLQCPIPEEQN 1002
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R V+T+ I
Sbjct: 1003 TRGRKIYPPEDAQQGFGILTLKRIPKLSAFSIFTRSGEVKVSLELAKERVVLTE---EQI 1059
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS------VD 834
F +L +F F P S+ ++P I + +D
Sbjct: 1060 SCVNAFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTIRGSGAEGTSRHID 1111
Query: 835 WKIIRRCLSSPVFGTPGGSVDRKSLPSHGPL-QLHNGWSSESDVENSLVYATHKKWFYLV 893
WK + + ++ GS+ +++P L Q + + V + ++ V
Sbjct: 1112 WKFLEQIQAN-------GSMMPQAVPDEQRLAQAFDAQRFQDAVVMPWYRNQDQPQYFYV 1164
Query: 894 TNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NR 949
I + S + + + + + YG+ +++ QPLL N L NR
Sbjct: 1165 AEICPHLSPLSCFPGDNYRTFRHYYLVKYGLTIQNASQPLLDVDHTSARLNFLTPRYVNR 1224
Query: 950 K-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
K E+++ + E E L PELC + F + + LP I++R+ LL
Sbjct: 1225 KGVALPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLL 1282
Query: 1001 VAIELKHLLSASFPEGAE 1018
+A +++ +SA G +
Sbjct: 1283 LADDIRKQVSADLGLGRQ 1300
Score = 48.5 bits (114), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L+GH ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1740 LVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1798
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLI 1303
LRS V N + + +++I
Sbjct: 1799 HLRSKQVANLNLYRLGRRKRLGEYMI 1824
Score = 47.4 bits (111), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ LE+LL E + +L F + + + M + T + + + +RLE
Sbjct: 2008 LPFAPNASDELEHLLSGFEEFEAILGYRFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2065
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2066 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2118
Score = 47.4 bits (111), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL-- 117
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ K + ++L+ V
Sbjct: 17 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRSSRRKGK-VSVYLSCQVGSDT 75
Query: 118 -VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
++ KV + HC W Y V ++ P+ L L +
Sbjct: 76 NATSMCTMLTHLTDLKVWQEQPDMQVPFDHC-WT----DYHVSILRPEGFLELLELGQLA 130
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGAS 231
+ + L++ ++CH V Y+K++ +K I + PRI G+ G S
Sbjct: 131 LNRVGLIVMEDCHDGSV-----YSKLVP-IFKNHICRAPAGDRPRILGL-----AGPLHS 179
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY 274
A+ L + + LE L + + +E A D+ + + + Y+Y
Sbjct: 180 AECQLEELSSMLETLEEHVMCRIETASDIVTVLRYCKPKPYEY 222
>gi|310794641|gb|EFQ30102.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1447
Score = 212 bits (539), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 204/676 (30%), Positives = 300/676 (44%), Gaps = 106/676 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQ E+ ++M +NIIV + TG GKT +AVL I A + R K I FLAPTV+L
Sbjct: 65 ARAYQTEMFDQSMRQNIIVAMDTGSGKTQVAVLRIR--AEVERTSSKHIVWFLAPTVSLC 122
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ V++ I F G + S D W++ + ++V QILL L H F+
Sbjct: 123 AQQFAVLQSQIPEVQIKFLSGDDNVDSWSDQRTWDEVLHNVRIVVSTYQILLDALSHAFV 182
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGASA 232
+ME ++L++FDE H+ KS P +KIM FY + K P I G+TASP G
Sbjct: 183 RMERLSLIVFDEAHNCIGKS--PGSKIMTVFYHEEKGKGRYTPHILGLTASPTFGSKV-- 238
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+ IN+LE LDA SP V S+ L
Sbjct: 239 -----EGINALEATLDA-------------VCKSPTVHR-----------------SDLL 263
Query: 293 AEIKRE--QYISALSRKLHDH----QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
A +K+ YIS + +D QSLR + L+ L D L++ G + A +
Sbjct: 264 ACVKKPTMTYISFQPHRCYDPPGSLQSLRKAIRSLDILDDPHILHLQSEGTERSQRALMV 323
Query: 347 LL-SGDETMRNELIE--AEGNTIDDSLCRFASQ-----ASEVFAAICRRDGIA------- 391
L S D ++N++ + N I + L +A++ F A R I+
Sbjct: 324 ALESHDTWIQNQMTSFGRQANQIFNDLGPWAAEYYIWVVKSRFMAALRSQSISLNTWKDD 383
Query: 392 ---------SDLSCI----EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTAR 438
+ + C E + S+K+ LI L + + + +VFV T
Sbjct: 384 EKEYLAKILNQVECQCPPEETIGGDVLSEKVFLLIEQL--LQDKTDIMGVVFVRERATVS 441
Query: 439 ALSYILQNLKFL-ASWRCHFLVGVNA------GLKSMSRNAMKSILEKFRSGELNLLVAT 491
L ++L + K L A +R +VG + + +SR+ L +FR+G+ NLL+AT
Sbjct: 442 VLCHLLASHKLLRARYRMGAMVGTSQFQARKRDIWDLSRSEDLQSLHQFRNGKTNLLIAT 501
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD---LIK 548
V EEG+D+ C +VI FD P + SFIQ RGRARM S+ L DS + L
Sbjct: 502 SVLEEGIDVPACNVVICFDYPPNLKSFIQRRGRARMKDSKLLMLHDSSESAPKEWAALEA 561
Query: 549 NFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF 608
+ + RE+ + S E I+ ++ +GA + L C L EF
Sbjct: 562 EMKSQYEEKERELEHLKEVEDTEESTEMIFVINQTGAVLDPENAKQHLDHLCRILSPGEF 621
Query: 609 FNPKPKFYYFDDLGGT-----ICHIILPANAPIHQIVGTPQSSM-----EAAKKDACLKA 658
+ +P Y LG ++LP+ P H V T +S M + A KDA +A
Sbjct: 622 IDWRPD-YIIKKLGAVDAPDIRATVVLPSYLPSH--VRTAESQMAWKSEKNATKDAAFQA 678
Query: 659 IEDLHKLGALNDYLLP 674
L+K G +ND LLP
Sbjct: 679 YVGLYKAGLVNDNLLP 694
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 202/450 (44%), Gaps = 75/450 (16%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSI+H +E LVA EL L A ++L A++T E + ER+E LGD
Sbjct: 942 LIPSILHHIETRLVARELSLGLLRPL---AISDLSLILTAISTGSASEPTNYERIEFLGD 998
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK++ ++ L+ E L+ + V+NS L K A ++ L YI +PF ++
Sbjct: 999 SILKFSATINVAALNPQWPERLLSFHKDAIVSNSTLCKAAVKHGLDRYILTKPFTGQKWR 1058
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ + S+ ++++ + KT+AD+VEAL+GA +
Sbjct: 1059 PI--YVDSVLSRGEDKSMRK----------------------MSTKTLADIVEALIGASM 1094
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
D G A + Q+ + + + + S + + LE L+G++F +
Sbjct: 1095 IDGGLDKALKCMSIFLQQINWRTLDACRLALYNFSPPDVELPSTLEPLEHLIGYKFDRKT 1154
Query: 1228 LLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LL+QA H SFN LG GC +RLEF+GD+VLDY++ + L++V P L + L++ +V
Sbjct: 1155 LLIQAMTHASFN-LGNPFGCLERLEFMGDSVLDYVVVNRLFAVEPPLPHQTMHLLKTAMV 1213
Query: 1285 NNQAFANVAVDQS--------------------------FYKFLIFDSNVLS-ETINNYV 1317
N ++++QS +KF+ S + E IN +
Sbjct: 1214 NGDFLGFLSLEQSIGQDEVVLGENTGKEPNLQHSRFSLPLWKFMRHQSPAIGLEQINVHK 1273
Query: 1318 DYM-ITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLNTVWKI-- 1364
Y + ++ G P K D+ ES LGA+ +DSG +L ++
Sbjct: 1274 RYTALRDQIIDSMERGKTYPWALLARIQLRKFYSDIFESLLGAVYVDSG-DLGVCARVVE 1332
Query: 1365 ---MLSFLDPILKFSNLQLNPIRELLELCN 1391
+ +LD IL+ L+P EL L +
Sbjct: 1333 RFGITGYLDRILRDGVHVLHPKEELGHLAD 1362
>gi|402079303|gb|EJT74568.1| dicer-like protein 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1607
Score = 212 bits (539), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 190/648 (29%), Positives = 296/648 (45%), Gaps = 75/648 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK--------PQKSICIFL 111
R+YQ+EL ++A ++N I L TG GKT I++LLI H+I K + FL
Sbjct: 174 REYQIELFERAKQKNTIAVLDTGTGKTLISILLIR---HIIEKELETRSQGKENRATFFL 230
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCD-WEKEIDQYEVLVMIPQILLYC 169
V LV QQ K + ++ F + G S L + + W+K V+V +IL C
Sbjct: 231 VDKVTLVWQQTKQLHSNLDFAITGIHGDSVTHLWNDIEYWQKLRSDNMVIVCTAEILYTC 290
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVG 227
L +I M I LL+FDE HH K NHPYA+I+KDFY + D PR+ GMTASP
Sbjct: 291 LARGYINMRQINLLVFDEAHH--TKKNHPYARIIKDFYVTEEDPDARPRVLGMTASPFDT 348
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
K ++ K+ + LE LL +++ ++ D E L++ + R Y + +
Sbjct: 349 K----TIHIEKAASELERLLHSEIATIADDELLKAIGNRAEERNVPYAFLPH-------- 396
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
RE + L +KL ++L + Q + + K LG A +
Sbjct: 397 ---------REP--TDLCKKL---ETLLRSHSQFKKAFSTAKIVASELGPWCADRLWELK 442
Query: 348 LSGDETMRNELIEAEGNTIDDS----LCRFASQASEVFAAICRRDGIASDLSCIEVLKEP 403
D + AE N+ ++ +C AA+ ++ S + ++
Sbjct: 443 FQDDSGLEG---RAESNSRRENSEWQMCETDQLGDLREAALIVKN------SALGPPQDD 493
Query: 404 FFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW---RCHFLV 459
S K L+L+ IL F + +CIVFV R A L+ ++QN + +L+
Sbjct: 494 GLSSKTLKLLEILEENFCSETSTQCIVFVERRDVAVLLTDLVQNPAMSVRFPYLNAAYLI 553
Query: 460 GVNAG--LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G S+S ++ + FR ELN L AT + EEGLDI C LVIRFDL +T
Sbjct: 554 ASGRGDSHTSISNKKQEATVWSFRLRELNCLFATSIAEEGLDIPGCNLVIRFDLHKTTIQ 613
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--------EIMDRTSSDA 569
+IQSRGRARM S + + + GNQ + +E M + I+ R +D
Sbjct: 614 YIQSRGRARMAGSVFIQMTEMGNQDHMRSWYQHQADERTMRQFCAALPEDRILQRIGADV 673
Query: 570 FTC----SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHD-EFFNPKPKFYYFDDLGGT 624
+ +R+Y V +GA ++ + +++L Y LP + E + P++ +GG
Sbjct: 674 DSALHGDQGQRVYVVPETGARLTYKHSLNVLAEYVGTLPVNVEGLSFGPEYTVIPVIGGF 733
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
++LP ++P+ G+ Q S AK A L + G L+ YL
Sbjct: 734 QGEVLLPESSPLRSATGSIQRSKAVAKCSAAYAMCISLIEAGYLDAYL 781
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 207/479 (43%), Gaps = 90/479 (18%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDIGSSL 986
P++ A+ + RNLL E + +P C L+I ++ S
Sbjct: 1035 PVVEAELVSLRRNLLDQNDAETA-----------VPQRTCFLVLETLQISRLPVEVVSMA 1083
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE--------KCQERF- 1037
P+I++RLEN L+A+ +LL G + ++ L+A+T + + F
Sbjct: 1084 YNFPAIIYRLENNLIALNCCNLL------GLSIRPDLALEAVTKDSDNSDEPDEAPVNFQ 1137
Query: 1038 -----SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
+ ERLE LGD FLK A LF L DE E R + N NLL +A L
Sbjct: 1138 GGMGKNYERLEFLGDCFLKMATTIALFTLM-AGDEFEYHVERMTDICNKNLLNVALDMGL 1196
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
Q YIR + F+ ++ G + E + T H L
Sbjct: 1197 QKYIRSKSFNRRTWYPSGLTLLKGKRLEADAT-----------------------HSLGD 1233
Query: 1153 KTIADVVEALVGA-FID-------DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
K+IADV EAL+GA ++ D KA T + ++ A +
Sbjct: 1234 KSIADVCEALIGAAYLTGRERNSFDMAVKAVTLLTRSQTHTMKSFAEYRAAYVKPEWQTV 1293
Query: 1205 PLSA-SLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYL 1259
P S L++A ++ +G++F LL AF+HPS+ R+ YQRLEFLGDA+LD
Sbjct: 1294 PASRLQLELARRIKEKMGYEFKDARLLRSAFMHPSYPRVYENIPSYQRLEFLGDALLDMT 1353
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY 1319
+L+ +P P LT+ + +V+NQ + +AV+ F++ ++ L I ++VD
Sbjct: 1354 CIDHLFGRFPDRDPQWLTEHKMAMVSNQFYGCLAVELGFHRHVVCLKTQLQGQIADWVDR 1413
Query: 1320 M---------ITPSSTREVKEGPRC--------PKVLGDLVESSLGAILLDSGFNLNTV 1361
+ + R + R PK L D++E+ +GA+ +D+G++ V
Sbjct: 1414 LGERRRRAEQAAVDAGRPAADFARNFWVDMEHPPKCLPDVLEAYVGALFVDAGYDYGAV 1472
>gi|158706449|sp|A2R345.2|DCL21_ASPNC RecName: Full=Dicer-like protein 2-1; Includes: RecName:
Full=Endoribonuclease dcl2-1; Includes: RecName:
Full=ATP-dependent helicase dcl2-1
Length = 1387
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 193/684 (28%), Positives = 316/684 (46%), Gaps = 103/684 (15%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P R YQ+E+ + +++ENIIV +GTG GKTHIA+L I + L P K I FL PT
Sbjct: 15 PAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALLRI--IKELESNPHKLIW-FLTPT 71
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ K + ++I + RT K W+ + + +V+V +L +
Sbjct: 72 VALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAVLADAMS 131
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
H F+K+ + L+IFDE HH + HP KIM+DFY P + + VP+I G+TASPVV
Sbjct: 132 HGFVKITQLGLMIFDEAHHCMRR--HPANKIMQDFYHPALERHGAEAVPKILGLTASPVV 189
Query: 227 GKGASAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYGPVIND---- 280
+ + +E+ LDA K +E L + P ++ + PV+ D
Sbjct: 190 RSNR-------QELLKIESNLDAVCKTPRTHRSE-LMTHTHRPHLQQILFTPVLLDDLQV 241
Query: 281 ---TSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMK 329
T + V+ L ++ + YI L + D ++L+ QL R
Sbjct: 242 GSKTLKALVSAWTSL-RLEDDPYIKKLRKSPLDGRALQKVLESGKTYCNDQLKRFATRSL 300
Query: 330 FCLENLGVCGA---LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
E LG A +HAS E ++A D++ + + + + +
Sbjct: 301 HIFEELGEWAADYFIHASI-----------EQLKARAGNSADTMGWTDEEKAYLLDIVSK 349
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
DL+ + + P S K L+ L T + + + ++F + T + +L
Sbjct: 350 LPIPNIDLTHSDPDRIPI-SSKFRSLLEFLDT-KGEPNFSGLIFAKQRATVSVMEKLLSI 407
Query: 447 LKFLA-SWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+RC VG + G + + L +FR+G+ NL++AT V EEG+D
Sbjct: 408 HPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGID 467
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNF 550
I C +V+ FD P + SF+Q RGRAR QS YA + + ++ E +I+ +
Sbjct: 468 ISACSVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAY 527
Query: 551 SKEEDRM---------NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+E R+ N E+++R +V S+GA ++A V+ L+ +C+
Sbjct: 528 EDDERRLREAWALEAINEEVVER-------------LEVQSTGAVLTADTAVAHLNHFCA 574
Query: 602 KLPHDEFFNPKPKFYYFDD----LGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDA 654
LP + + +P+F Y D L GT+ LP+ + + +I G E AA+K+A
Sbjct: 575 VLPRQPYASNEPEFSYEKDDADLLRGTVT---LPSCVHPGVRRIQGQRWWQTERAARKEA 631
Query: 655 CLKAIEDLHKLGALNDYLLPQEDN 678
+A + L++ G L+D+LLP + N
Sbjct: 632 AFQAYKRLYEFGLLSDHLLPFKRN 655
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 189/461 (40%), Gaps = 79/461 (17%)
Query: 943 RNLLHNRKLE----DSESHELEEYFDDLPPELCQLKIIGFSKDI-GSSLSLLPSIMHRLE 997
RNLLH + L DSE+ + + E C + + +++ I G +S+ I+ RLE
Sbjct: 854 RNLLHRQTLAAKQPDSETPAISSKIRLILAENCTIDKLPYAETIFGRFISV---ILDRLE 910
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
LVA L + S ++ A+T Q + +R E GD+ LK+ V
Sbjct: 911 ATLVATRLCETILRDLEFS---SIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQ 967
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF H EG L+ R V NS L + A L +I ++ F P ++ A P I
Sbjct: 968 LFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSA-----PLIS 1022
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
K + + + K +ADVVEAL+GA D GF AA A
Sbjct: 1023 EK---------------------ISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHA 1061
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+ +V E T + + +L+ L +G+ F ++ LL+++ HPS
Sbjct: 1062 CIHRFLPEVNLENIDRTTAPMPKDGV--TNHTLNDDHLMAHIGYTFTNKSLLVESLTHPS 1119
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA----- 1290
F+ YQRLEFLGDAVLD I S L S ++ G +T ++ +VN A
Sbjct: 1120 CQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCME 1179
Query: 1291 --------NVAVDQS-------------FYKFLIFDSNVLSETINNYVDYM--ITPSSTR 1327
NV V + ++F+ + L + + + S
Sbjct: 1180 FALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIH 1239
Query: 1328 EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+K P P K D++ES LGAI +DS NL
Sbjct: 1240 GLKHSPSYPWKSLSQLNADKFFSDIIESILGAIFIDSHGNL 1280
>gi|317035030|ref|XP_001400925.2| ATP-dependent helicase dcl2 [Aspergillus niger CBS 513.88]
Length = 1407
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 193/684 (28%), Positives = 316/684 (46%), Gaps = 103/684 (15%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P R YQ+E+ + +++ENIIV +GTG GKTHIA+L I + L P K I FL PT
Sbjct: 15 PAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALLRI--IKELESNPHKLIW-FLTPT 71
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ K + ++I + RT K W+ + + +V+V +L +
Sbjct: 72 VALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAVLADAMS 131
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
H F+K+ + L+IFDE HH + HP KIM+DFY P + + VP+I G+TASPVV
Sbjct: 132 HGFVKITQLGLMIFDEAHHCMRR--HPANKIMQDFYHPALERHGAEAVPKILGLTASPVV 189
Query: 227 GKGASAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYGPVIND---- 280
+ + +E+ LDA K +E L + P ++ + PV+ D
Sbjct: 190 RSNR-------QELLKIESNLDAVCKTPRTHRSE-LMTHTHRPHLQQILFTPVLLDDLQV 241
Query: 281 ---TSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMK 329
T + V+ L ++ + YI L + D ++L+ QL R
Sbjct: 242 GSKTLKALVSAWTSL-RLEDDPYIKKLRKSPLDGRALQKVLESGKTYCNDQLKRFATRSL 300
Query: 330 FCLENLGVCGA---LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
E LG A +HAS E ++A D++ + + + + +
Sbjct: 301 HIFEELGEWAADYFIHASI-----------EQLKARAGNSADTMGWTDEEKAYLLDIVSK 349
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
DL+ + + P S K L+ L T + + + ++F + T + +L
Sbjct: 350 LPIPNIDLTHSDPDRIPI-SSKFRSLLEFLDT-KGEPNFSGLIFAKQRATVSVMEKLLSI 407
Query: 447 LKFLA-SWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+RC VG + G + + L +FR+G+ NL++AT V EEG+D
Sbjct: 408 HPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGID 467
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNF 550
I C +V+ FD P + SF+Q RGRAR QS YA + + ++ E +I+ +
Sbjct: 468 ISACSVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAY 527
Query: 551 SKEEDRM---------NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+E R+ N E+++R +V S+GA ++A V+ L+ +C+
Sbjct: 528 EDDERRLREAWALEAINEEVVER-------------LEVQSTGAVLTADTAVAHLNHFCA 574
Query: 602 KLPHDEFFNPKPKFYYFDD----LGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDA 654
LP + + +P+F Y D L GT+ LP+ + + +I G E AA+K+A
Sbjct: 575 VLPRQPYASNEPEFSYEKDDADLLRGTVT---LPSCVHPGVRRIQGQRWWQTERAARKEA 631
Query: 655 CLKAIEDLHKLGALNDYLLPQEDN 678
+A + L++ G L+D+LLP + N
Sbjct: 632 AFQAYKRLYEFGLLSDHLLPFKRN 655
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 189/461 (40%), Gaps = 79/461 (17%)
Query: 943 RNLLHNRKLE----DSESHELEEYFDDLPPELCQLKIIGFSKDI-GSSLSLLPSIMHRLE 997
RNLLH + L DSE+ + + E C + + +++ I G +S+ I+ RLE
Sbjct: 854 RNLLHRQTLAAKQPDSETPAISSKIRLILAENCTIDKLPYAETIFGRFISV---ILDRLE 910
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
LVA L + S ++ A+T Q + +R E GD+ LK+ V
Sbjct: 911 ATLVATRLCETILRDLEFS---SIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQ 967
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF H EG L+ R V NS L + A L +I ++ F P ++ A P I
Sbjct: 968 LFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSA-----PLIS 1022
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
K + + + K +ADVVEAL+GA D GF AA A
Sbjct: 1023 EK---------------------ISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHA 1061
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+ +V E T + + +L+ L +G+ F ++ LL+++ HPS
Sbjct: 1062 CIHRFLPEVNLENIDRTTAPMPKDGV--TNHTLNDDHLMAHIGYTFTNKSLLVESLTHPS 1119
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA----- 1290
F+ YQRLEFLGDAVLD I S L S ++ G +T ++ +VN A
Sbjct: 1120 CQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCME 1179
Query: 1291 --------NVAVDQS-------------FYKFLIFDSNVLSETINNYVDYM--ITPSSTR 1327
NV V + ++F+ + L + + + S
Sbjct: 1180 FALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIH 1239
Query: 1328 EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+K P P K D++ES LGAI +DS NL
Sbjct: 1240 GLKHSPSYPWKSLSQLNADKFFSDIIESILGAIFIDSHGNL 1280
>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum
commune H4-8]
Length = 1342
Score = 211 bits (538), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 293/650 (45%), Gaps = 63/650 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ E+ ++A N I L TG GKT+I ++LI +A + K I +FL P VALV+
Sbjct: 1 RQYQEEIFRQAQAGNRIAALDTGSGKTYIGLMLIKWIASQPQNKDKLI-VFLVPRVALVE 59
Query: 120 QQAKVIEESIGFKVRTFCG-GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQ I + +V G + + W +VLVM QI L L H +
Sbjct: 60 QQGNFIAANSTLRVTQKHGQNALDMADREGWAAVFATSDVLVMTAQIYLDLLTHSHWSIA 119
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
+L+IFDECHHAQ N PY +IM ++ + PR+FG+TASP+ N K
Sbjct: 120 HTSLIIFDECHHAQ--KNDPYRQIMDEYRHCAPGQRPRVFGLTASPIWDA-----RNPGK 172
Query: 239 SINSLENLLDAKVYSVE-DAEDLESFVSSP--VVRVYQYGPVINDTSSSYVTCSEQLAEI 295
++ +LE LDA+V V A +L++ + P V++ Y+ + E+
Sbjct: 173 ALAALETKLDAQVVGVRLHAGELDAHTARPREVIKTYR---------------ALDPEEV 217
Query: 296 KREQYISALSRKLHDHQSL--RNTTKQLNRLHDSMKFCLENLG-VCGALHASYILLSGDE 352
R + + R + +L ++ L +LG C +L+ L
Sbjct: 218 GRGSF-PGMGRSVEVFGTLDWEGADVMWRKIMGRYDVTLASLGPYCASLYLYQELSDIVA 276
Query: 353 TMRNELIEAEGNTIDDSLCRFASQASEVFAAIC---------RRDGIASDLSCIEVLKEP 403
+R + A DD + + A C + SDL+ + L +
Sbjct: 277 RLRPQAETAFERAADDPAGSSTTGKMSLAHARCLLAIEDILTDYEPYFSDLAASDALLDD 336
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-RCHFLVGVN 462
+FS K+ L+ +L L + IVFV++ A L+ IL L L RC +G N
Sbjct: 337 WFSPKVHALVDVLLAQDLATS-RGIVFVDQRQVALCLALILPRLSRLQGLVRCASFIGQN 395
Query: 463 AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
G+ + + + + +FRSGE+NLL+AT V EEG D Q C LV+RFD + + ++QS
Sbjct: 396 PGIDGPKAIGSQRDVASQFRSGEVNLLIATSVAEEGHDFQACDLVVRFDPLQHLVGYLQS 455
Query: 522 RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC--------- 572
RGRAR S + ++ G++ F K E ++ R++ DA +
Sbjct: 456 RGRARNKSSMFVVMLPEGDEPSRAKYDFFRKCEPQLREVYNTRSAEDATSVNVDDDAEEL 515
Query: 573 -----SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC- 626
+E + V S+GA ++ + LL CS +P D F+P P Y D T+
Sbjct: 516 SPEMLAERERFVVPSTGAILTYDNAIGLLGHLCSLIPRDP-FSPPPAPVYTGDFISTVQL 574
Query: 627 --HIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
I LP + Q G +++ + AK+ A + + LH + YLLP
Sbjct: 575 PRSIPLPPAELVFQ--GATKATKKEAKRSAAFRTVRYLHAKDVFDAYLLP 622
Score = 123 bits (308), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 194/425 (45%), Gaps = 51/425 (12%)
Query: 974 KIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKC 1033
K I S+DI S+L +LPS++ R ++ A + L + + ++L++ALT
Sbjct: 884 KWIDLSEDILSALHILPSLLRRATDVYRADRARLALGLPY-----IERDLLIQALTLPCA 938
Query: 1034 QERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
F+ +RLE LGDA L+ + HLF + EG+LT R ++N LL A L+
Sbjct: 939 GMPFNNQRLETLGDAVLELSTTVHLFNKYPHRHEGQLTPLRQICISNKCLLTRAREVQLE 998
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKK 1153
R + ET HS +D RC++ ++
Sbjct: 999 ---------------------RFLTSET----HSLSIWDYVEDSEVPARCAR--RLFPRR 1031
Query: 1154 TIADVVEALVGA-FID---DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS 1209
++ D +EA++GA ++ D+ A TA G V + + +
Sbjct: 1032 SLQDCMEAILGASYLTGGIDTALHAGTALGLAFGGSVPWPRRYPRRRRVPTPDLF----- 1086
Query: 1210 LDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSV 1267
+ L+ LG+ F GLL +A H SF L G Y+RLEFLGDAV++ + YLY
Sbjct: 1087 ---SELQAKLGYTFRDGGLLCEALTHSSFASLDSYGSYERLEFLGDAVINLAVVDYLYRK 1143
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMITPSST 1326
+P QL+ R+ V NQA + ++V +K ++ ++ LS IN + +
Sbjct: 1144 FPDANSDQLSLPRARAVCNQALSALSVKHLQLHKSVLVNNVELSIAINKHAPILEDKPYP 1203
Query: 1327 REVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNP 1382
+ +G + PKVL D+ ES +GA+ +D+G++ ++ ++ +L + +P
Sbjct: 1204 EILVKGWKLDPPKVLSDIFESIVGAVFVDTGYDYEITAAVVEQAMEGLLVHLSPAMPRDP 1263
Query: 1383 IRELL 1387
+ EL+
Sbjct: 1264 VSELI 1268
>gi|328716579|ref|XP_001944314.2| PREDICTED: endoribonuclease Dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1609
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 215/428 (50%), Gaps = 58/428 (13%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ HD V EG+L+ RS V+
Sbjct: 1123 SPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 1182
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA-------LGRRCPRI--------- 1116
N NL +L + + +P D PC F + P
Sbjct: 1183 NLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNMITLPT 1242
Query: 1117 ----CSKETERTIHSQYDGRAPDDL-NAEVRCSKG---HHWLHKKTIADVVEALVGAFID 1168
KE E I G + +D+ N + H + K+IAD VEAL+GA++
Sbjct: 1243 FKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVPYNLVTQHSIPDKSIADCVEALIGAYLI 1302
Query: 1169 DSGFKAATAFLKWIGIQV--EFEASQVTNICISSKSFL--------PLSASLD-MATLEI 1217
G + A F+ W+GI+V + S++ + S L L+ +D + E
Sbjct: 1303 SCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPSSPLLRNVDDPEGELTKLMDGFESFEQ 1362
Query: 1218 LLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ 1275
LG+ F R LLQA H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG
Sbjct: 1363 HLGYHFQDRSYLLQAMTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGA 1422
Query: 1276 LTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITP 1323
LTDLRS LVNN FA++AV F+K+ S LS+ + +V ++
Sbjct: 1423 LTDLRSALVNNTIFASLAVRNGFHKYFKHLSPGLSDVVCRFVTIQEENGHTIDEEFYFLG 1482
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLN 1381
E E PK LGD+ ES GAI LDS +L+TVWK+ + + + +FS N+ +
Sbjct: 1483 EDDCEEAEDVEVPKALGDVFESVAGAIYLDSNMSLDTVWKVYHKIMENEMEQFSKNVPKS 1542
Query: 1382 PIRELLEL 1389
PIRELLEL
Sbjct: 1543 PIRELLEL 1550
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 427 CIVFVNRIVTARALSYILQNLKFLAS----W-RCHFLVGVNAGLKS------MSRNAMKS 475
I+ VN +TA L Y+ +LK W + + V A + + +
Sbjct: 191 AIILVNNKMTASILYYLFLDLKNSNKEDFGWIQPQYTVDKEADPITEPKEFEIEHKKQEE 250
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
L +FR E N+L+ TKV E G+D+ C LVI +++P + S+++S+ RA+ + Y +
Sbjct: 251 TLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKSRAKTLDAHYILM 310
Query: 536 VD----SGNQRELDLIKNFS---------KEEDRMNREIMDRTSSDAFTCSEERIYKVDS 582
D S L L K+ + K+ D DR + F + K DS
Sbjct: 311 FDEDATSNILSRLKLYKDINQMLLSHCTLKDIDMEKETYADR--YNWFVTPFKPGKKEDS 368
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPANAPI-H 637
A + + L++RYC+KLP D F P + +++ +C I LP N+PI H
Sbjct: 369 --AFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKTQSVVYENQPMFVCSIRLPINSPIKH 426
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
I G P AK+ A L+ LH G L+D L P
Sbjct: 427 DIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQP 463
>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
Length = 1591
Score = 210 bits (535), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 189/653 (28%), Positives = 299/653 (45%), Gaps = 82/653 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A ++N I L TG GKT IA+LLI EL + +K I FL
Sbjct: 109 REYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHIIELELGARWQGREKRITFFLVDK 168
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
VALV+QQ I ++ F V G + R S +EK + + EV+V +IL CL+
Sbjct: 169 VALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYRCLHR 228
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGA 230
++ + ++L++FDE HHA K NH YA+I+KDFY + D K PRIFGMTASP+ K
Sbjct: 229 SYLNISQVSLVVFDEAHHA--KKNHVYARIIKDFYLMEEDCQKRPRIFGMTASPIDTKDT 286
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ ++ + LE+LL +++ ++ D + L+ S P Y V+ ++
Sbjct: 287 C--ISYERATHELESLLHSEIATISDRDLLKVIGSRPQEVRKSYARVLRQENTELCN--- 341
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
QL E+ + +H + T DS +F + LG A +
Sbjct: 342 QLREL------------VGNHPLFKQT-------FDSAEFAVTELGAWCADKLWELCF-- 380
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL-----KEPFF 405
R E + ++ S R + E + LS ++ ++
Sbjct: 381 ----REEAVSTLDGRVEGSRARDPDEVGESSHEV---SNAREALSLVQQWSFSPPEDGSL 433
Query: 406 SKKLLRLIGILSTFRLQ----QHMKCIVFVNRIVTARALSYILQNLKF---LASWRCHFL 458
S K +LI IL+ Q ++CIVFV R TA L+ + + + + + FL
Sbjct: 434 STKTHKLIEILAECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFL 493
Query: 459 VGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
+G G + + + + +FR GE+N L AT + EEGLDI C +VIRFDL T
Sbjct: 494 IGAGRGGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTI 553
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE-------------IMD 563
+IQSRGRARM S + + + GN N +DR+N + IM+
Sbjct: 554 QYIQSRGRARMRNSWFIHMTEFGNPEH-----NRRWFQDRVNEQKMRDFCLSLPKDRIME 608
Query: 564 RTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPH--DEFFNPKPKFYYFD 619
+ D + ++I+ V S A ++ + +L + + LP DE + +
Sbjct: 609 KAEVDDVLRGDQSQKIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILS--VDYTVVP 666
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
GG + LPA++P+ +G S + AK A L+ L+D+L
Sbjct: 667 VFGGFQGEVYLPASSPLRSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719
Score = 127 bits (320), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 226/523 (43%), Gaps = 111/523 (21%)
Query: 915 VDHLISSYGI---------HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDD 965
V+H I +Y + H QP++ A+ RNLL E+S
Sbjct: 947 VEHTILNYSVSLWKKSRAGHNSRQDQPVVEAELAPLRRNLLDETDGENSTG--------- 997
Query: 966 LPPELC-----QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
P+ C L I D P+I++RLEN L+++E L G ++
Sbjct: 998 --PQTCYLVLETLLISQIPVDTVVMAYTFPAIIYRLENSLISLEACQNL------GLDIP 1049
Query: 1021 AEMLLKALTTEKCQER--------------FSLERLEILGDAFLKYAVGRHLFLLHDTVD 1066
++ L A+T + + ERLE LGD FLK A L+ L + D
Sbjct: 1050 IDIALIAMTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEG-D 1108
Query: 1067 EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIH 1126
E E R + N NLL A +NLQ +IR + F+ ++ G + + K+TE
Sbjct: 1109 EFEYHVERMLDICNKNLLNWALESNLQEHIRSKSFNRRTWYPPGLKL--LKGKKTE---- 1162
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF---LKWIG 1183
DD H L K+IADV EAL+GA + +++ F +K +
Sbjct: 1163 -------VDD----------EHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVT 1205
Query: 1184 IQVEFEASQV--------TNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFV 1234
+ + + + C S P L++ + ++ +G++F + LL AF+
Sbjct: 1206 VMTHSKTHTMQAWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFM 1265
Query: 1235 HPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
HPS+ R YQRLEFLGD++LD + YL+ +P P LT+ + +V+NQ F
Sbjct: 1266 HPSYPRQYENIPSYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGC 1325
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE------VKEGPR----------- 1334
VAV F++ LI L +I + + + + RE V+ G R
Sbjct: 1326 VAVGLGFHRHLIHMQPALGGSITEWAELV---TKKREEARQLAVRRGQREEDYARDFWIE 1382
Query: 1335 ---CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
PK L D++E+ +GA+ +D+G++ + V + F D +K
Sbjct: 1383 VHHPPKCLPDILEAYVGALFVDTGYDYSAV----VGFFDRHIK 1421
>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
Length = 1658
Score = 210 bits (534), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 189/653 (28%), Positives = 299/653 (45%), Gaps = 82/653 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A ++N I L TG GKT IA+LLI EL + +K I FL
Sbjct: 109 REYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHIIELELGARWQGREKRITFFLVDK 168
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
VALV+QQ I ++ F V G + R S +EK + + EV+V +IL CL+
Sbjct: 169 VALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYRCLHR 228
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGA 230
++ + ++L++FDE HHA K NH YA+I+KDFY + D K PRIFGMTASP+ K
Sbjct: 229 SYLNISQVSLVVFDEAHHA--KKNHVYARIIKDFYLMEEDCQKRPRIFGMTASPIDTKDT 286
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ ++ + LE+LL +++ ++ D + L+ S P Y V+ ++
Sbjct: 287 C--ISYERATHELESLLHSEIATISDRDLLKVIGSRPQEVRKSYARVLRQENTELCN--- 341
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
QL E+ + +H + T DS +F + LG A +
Sbjct: 342 QLREL------------VGNHPLFKQT-------FDSAEFAVTELGAWCADKLWELCF-- 380
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL-----KEPFF 405
R E + ++ S R + E + LS ++ ++
Sbjct: 381 ----REEAVSTLDGRVEGSRARDPDEVGESSHEV---SNAREALSLVQQWSFSPPEDGSL 433
Query: 406 SKKLLRLIGILSTFRLQ----QHMKCIVFVNRIVTARALSYILQNLKF---LASWRCHFL 458
S K +LI IL+ Q ++CIVFV R TA L+ + + + + + FL
Sbjct: 434 STKTHKLIEILAECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFL 493
Query: 459 VGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
+G G + + + + +FR GE+N L AT + EEGLDI C +VIRFDL T
Sbjct: 494 IGAGRGGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTI 553
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE-------------IMD 563
+IQSRGRARM S + + + GN N +DR+N + IM+
Sbjct: 554 QYIQSRGRARMRNSWFIHMTEFGNPEH-----NRRWFQDRVNEQKMRDFCLSLPKDRIME 608
Query: 564 RTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPH--DEFFNPKPKFYYFD 619
+ D + ++I+ V S A ++ + +L + + LP DE + +
Sbjct: 609 KAEVDDVLRGDQSQKIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILS--VDYTVVP 666
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
GG + LPA++P+ +G S + AK A L+ L+D+L
Sbjct: 667 VFGGFQGEVYLPASSPLRSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 231/531 (43%), Gaps = 113/531 (21%)
Query: 915 VDHLISSYGI---------HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDD 965
V+H I +Y + H QP++ A+ RNLL E+S
Sbjct: 947 VEHTILNYSVSLWKKSRAGHNSRQDQPVVEAELAPLRRNLLDETDGENSTG--------- 997
Query: 966 LPPELC-----QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
P+ C L I D P+I++RLEN L+++E L G ++
Sbjct: 998 --PQTCYLVLETLLISQIPVDTVVMAYTFPAIIYRLENSLISLEACQNL------GLDIP 1049
Query: 1021 AEMLLKALTTEKCQER--------------FSLERLEILGDAFLKYAVGRHLFLLHDTVD 1066
++ L A+T + + ERLE LGD FLK A L+ L + D
Sbjct: 1050 IDIALIAMTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEG-D 1108
Query: 1067 EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIH 1126
E E R + N NLL A +NLQ +IR + F+ ++ G + + K+TE
Sbjct: 1109 EFEYHVERMLDICNKNLLNWALESNLQEHIRSKSFNRRTWYPPGLKL--LKGKKTE---- 1162
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF---LKWIG 1183
DD H L K+IADV EAL+GA + +++ F +K +
Sbjct: 1163 -------VDD----------EHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVT 1205
Query: 1184 IQVEFEASQV--------TNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFV 1234
+ + + + C S P L++ + ++ +G++F + LL AF+
Sbjct: 1206 VMTHSKTHTMQAWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFM 1265
Query: 1235 HPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
HPS+ R YQRLEFLGD++LD + YL+ +P P LT+ + +V+NQ F
Sbjct: 1266 HPSYPRQYENIPSYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGC 1325
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE------VKEGPR----------- 1334
VAV F++ LI L +I + + + + RE V+ G R
Sbjct: 1326 VAVGLGFHRHLIHMQPALGGSITEWAELV---TKKREEARQLAVRRGQREEDYARDFWIE 1382
Query: 1335 ---CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQL 1380
PK L D++E+ +GA+ +D+G++ + V + F D +K F+++ +
Sbjct: 1383 VHHPPKCLPDILEAYVGALFVDTGYDYSAV----VGFFDRHIKPYFADMSI 1429
>gi|406863987|gb|EKD17033.1| RNase3 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1477
Score = 210 bits (534), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 196/662 (29%), Positives = 304/662 (45%), Gaps = 74/662 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI-RKPQKSICIFLAPTVALV 118
R YQ E+ +++++ NIIV + TG GKTHIAV+ + H I R I FLAPTV L
Sbjct: 70 RPYQQEMLQESLKRNIIVAMDTGSGKTHIAVM---RMQHEIERSSPNQIIWFLAPTVDLC 126
Query: 119 QQQAKVIEESIGFKVRTFCGGSK---RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ I+ I F G R W + +++V QILL L H F+
Sbjct: 127 DQQFAYIQSQITAVQSKFLRGDDGVDRWTEQTHWNAVLKNVKIVVSTYQILLDALSHGFV 186
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASA 232
ME +AL++FDE H+ VKS H AKIM +FY K + VPRI G+TASPV+
Sbjct: 187 SMETLALIVFDEAHNC-VKS-HAGAKIMTNFYHGRKASNLGVPRILGLTASPVMRSD--- 241
Query: 233 QANLPKSINSLENLLDA--KVYSVEDAE-DLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
P+S+ +E +LDA + S +E L+ + V +YQ P + +
Sbjct: 242 ----PRSLVKIEEVLDAICRTPSKHRSELRLQVKLPKLVTVLYQTAPQAGSEGHTKTMKT 297
Query: 290 EQLA----EIKREQYISALS-------RKLHDHQSLRNTT---KQLNRLHDSMKFCLENL 335
+ A E+ + + LS RK D + + T Q+ H + L +L
Sbjct: 298 LEDAFSNMEVTADPWYLYLSKDTSEKGRKKFDRLRINHNTWCHSQMKSFHTTATKILRDL 357
Query: 336 GVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLS 395
G A + Y+ + +R A G+ L S+A ++ + S S
Sbjct: 358 GAWAADY--YV----SQVIRKLTKVANGSATHTDLSDM-SKAEKLHLTKVLQQVELSQRS 410
Query: 396 CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVN-RIVTARALSYILQNLKFLASWR 454
C+ S K+ +LI +L IVFV R + + L AS
Sbjct: 411 CLGFEDLHLLSDKVTKLIDVL--LNEPASFSGIVFVQVRDLATLDRQSMKTYLTTGASDS 468
Query: 455 CHFL---VG---VNAGLKSMSR----NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
H +G V A ++++S N K L +F+SG++NL +AT V EEG+D+ C
Sbjct: 469 SHPAPSDIGTPLVRARVRNISDLIDLNEQKHTLSRFKSGQINLAIATSVLEEGIDVPACN 528
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR-------ELDLIKNFSKEEDRM 557
VI F P + SF+Q RGRAR S L D + + E D+ K + E +
Sbjct: 529 TVICFQAPANIKSFVQRRGRARHRDSRLVLLSDYADGKVVEWKKLEEDMRKMYEDERRTL 588
Query: 558 NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
++ S + + R+++V+++GA + V+ L+ +C+K+P + + +P+F
Sbjct: 589 QSLLLAEDSEE----DDGRVFRVETTGALLDMDNAVAHLYHFCAKIPQSAYVDRRPEFTC 644
Query: 618 FDDLGGTICHIILPANAPIHQIVGTPQS-----SMEAAKKDACLKAIEDLHKLGALNDYL 672
++ G + ++LP + + Q V QS S + A KDA +A L+K G +ND L
Sbjct: 645 CEESGLSRAEVVLPLS--VDQTVRVAQSLRPWQSEKNAIKDAAFQAYIALYKAGLVNDNL 702
Query: 673 LP 674
LP
Sbjct: 703 LP 704
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 176/425 (41%), Gaps = 84/425 (19%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA-EMLLKALTT---------EKCQERF 1037
+PSIM+RLE +A LL+ + + ++ ++ A+T E +
Sbjct: 955 FIPSIMYRLEKSFLAT----LLTKTILKDIQIQDLNGIVTAITASSASDESHYENIKYEA 1010
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ +RLE LGD LK L + EG LT + V+NS L A N L +I
Sbjct: 1011 NYQRLEFLGDTILKMCTSIQLMAQYPLWHEGYLTELKGRIVSNSCLYAAAIENGLDRFII 1070
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
+ F + H D L + K AD
Sbjct: 1071 TKKF----------------------SGHKWRPTYVDDLLAMGTDHVDKPRTMSSKIPAD 1108
Query: 1158 VVEALVGAFIDDS--GFKAATAFLKWIGIQVEFEA-SQVTNICISSKSFLPLSASLDMAT 1214
VVEAL+GA +D GF+ LK +++++ +Q ++ + L +L +
Sbjct: 1109 VVEALIGACYEDGEMGFEKPLQCLKIFIPRIDWQPLAQSQSLLFQRAPNVELPQTLRI-- 1166
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK--LK 1272
LE +LG++F ++GLL++A H S+N +RLEFLGDA+LDYL+ L +
Sbjct: 1167 LEDMLGYEFNNKGLLVEAVTHASYNLGSASLERLEFLGDAILDYLVVERLMQTEDGTFIS 1226
Query: 1273 PGQLTDLRSMLVNNQAFANVAVD---------------------------QSFYKFLIFD 1305
++ +R+ LVN A + ++ +KF+
Sbjct: 1227 HVKMHLIRTALVNADILAFLCMEFHTTQEVIDLEIQPDGGSPQERPKMATLPLWKFMRHT 1286
Query: 1306 SNVLS--ETINNYVDYMITPSSTREV----KEGP-------RCPKVLGDLVESSLGAILL 1352
S+ ++ + + + ++ P R+V K P + PK DLVES +GA+ +
Sbjct: 1287 SSAIAAEQQVAAELHDLLAP-KIRDVFDSGKNYPWALLARQQAPKFFSDLVESLIGALYV 1345
Query: 1353 DSGFN 1357
DSG +
Sbjct: 1346 DSGLD 1350
>gi|158300291|ref|XP_320248.4| AGAP012289-PA [Anopheles gambiae str. PEST]
gi|157013088|gb|EAA00264.4| AGAP012289-PA [Anopheles gambiae str. PEST]
Length = 1672
Score = 209 bits (532), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 253/1060 (23%), Positives = 465/1060 (43%), Gaps = 137/1060 (12%)
Query: 52 DKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---S 106
+K+P + R YQ+++ + + +N I++L TG GKT+IA++++ E++H +R
Sbjct: 3 NKEPMEDFAPRNYQVQMKEICLAKNTIIFLPTGSGKTYIALMVMKEISHQLRNTVHEGGK 62
Query: 107 ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQI 165
FLA TVAL +QQA+ + F VR + D W +E + +V++ QI
Sbjct: 63 RTFFLANTVALAKQQAQFFARHMPFNVRLYTSEVNVDAWKSDRWHEEFSEGQVIICTAQI 122
Query: 166 LLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPV 225
LL L H ++ I L++FDECH A HP IMK+ + PR+ G++ + +
Sbjct: 123 LLDVLRHGYMSPANINLIVFDECHRA--VGQHPMHAIMKEIVAAPASERPRVLGLSGT-L 179
Query: 226 VGKGASAQANLPKSINSLENLLDAKVYSVEDAED---LESFVSSPVVRVYQYG------- 275
+ K + +P + LEN + + +V + +D + SF ++P + Y
Sbjct: 180 LFKELKMASQVPDELERLENTFSSTIATVANYDDYATVASFSTNPNEVLVTYSKPAVHLM 239
Query: 276 PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL 335
P++ + E L ++ +Y + +R L +S K++ R K LE
Sbjct: 240 PLVKEMWPRIDAFVEWLLQVYLPEYSTQSTRTLQ--KSFCKPLKEVKRALTEFKHQLEEH 297
Query: 336 GV-CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
G+ G+L +++ + + R + ++ S E+ A+ G L
Sbjct: 298 GMYAGSLAILAVIVQLEVSKRQSPCDKARQVYRSAISFCESIRHELVEAMSGLRGTHQIL 357
Query: 395 SCIEVLKEPFFSKKLLRLIGIL-STFRLQQ--HMKCIVFVNRIVTARALSYILQNLKFLA 451
S F S + +L+ L ++R + + + +VFV R TA+ L ++++
Sbjct: 358 S--------FSSDQARKLLKYLEDSYRTAEDKNKQALVFVKRRFTAKVLYHLIRIYFHCL 409
Query: 452 SWRCH------------FLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLVATKV 493
S R + F+VG NA L+ S +A+ + ++E FR ++N+L AT V
Sbjct: 410 SKRDNEDELVEPIVKPDFIVGANAALEE-SIDAILVVREDRRVIENFRKRKINVLCATNV 468
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN-QRELDLIKNFSK 552
EEG+D+Q C +VI +D P + ASF+QS+GRARM S Y + + + Q+ +K +
Sbjct: 469 LEEGIDLQMCNMVIMYDAPLSYASFMQSKGRARMKTSTYLMMTPAADLQQFAKRMKLYRD 528
Query: 553 EEDRMNREIMDRTSSDAFTCSEE-RIYKVDS--------SGACISAGYGVSLLHRYCSKL 603
E+R+ E++ +T + + R +D A + A + LL+RYC +
Sbjct: 529 IENRLKEELVGKTINRPEPLENDVRKELLDDLIPPFYTPFKAKLDALSAIQLLNRYCMSM 588
Query: 604 PHDEFFNPKPKFYYFD-DLGGTICHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAIED 661
P D F + D I + LP + + +++ G +++ AK+ A A +
Sbjct: 589 PRDLFTGSNVTWERIDRSPTEIIVTVKLPLQSTVREVIHGQTMKNLKLAKQSAAFNACKR 648
Query: 662 LHKLGALNDYLLP--QEDNATEDEPMLFS-----SDSDSYEGEGS----RGELHEMLVPA 710
L ++G LN YLLP +D E F SD + + G+ RG H+++ P
Sbjct: 649 LFEVGELNMYLLPIATKDKVEELSEQYFKLWRKMSDEPNPKQAGTMKYVRG--HKIVYPE 706
Query: 711 VLRQSWTKSQ------YPVRLNFYFMQFIPDPADRIYRE-------FGLFVKSLLPGEAE 757
++ Y VR+ +F RI++E FG+ + LP A
Sbjct: 707 ETVGCTPQADGEQCYVYIVRMRAHFDANTHLENVRIFQELYSSANNFGILTRKRLPRLA- 765
Query: 758 HLKVDLHLARGRSVMTKLVPSGIM--------QAQQFQEMFLKVILDRSEFNSEFVPLGK 809
++ L + G ++ ++VP + + Q+ + L + D + F L
Sbjct: 766 --RMKLFVTLG-AIGVEIVPEPVCITLAPDSGELQRLKRFHLLLFRDLLKVWKPFTVL-- 820
Query: 810 DDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
D E + +L++P++ S+DW+++ + + P ++ + H
Sbjct: 821 DALPEENG---FLIVPML-RSQSIDWELMGKF----PYLRPAAETSTRA-------RQHL 865
Query: 870 GWSSESDVENSLVYATHKKWF-------YLVTNIVFEKNGYSPYKDSDSSSHVDHLISS- 921
+ + E L+ H W+ Y+V + + SP+ ++ S+ +
Sbjct: 866 RF----ETEQYLLRVVH-PWYKNDPDQNYVVVRVRDDLRPTSPFPNAKYDSYEQYFAQEH 920
Query: 922 YGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF---DDLPPELCQLKIIGF 978
+ + ++H Q L+ K + N LH D + Y+ + L PEL F
Sbjct: 921 HQVVVRHEDQFLIEVKGITTSLNRLHPGAEADGGASTRSRYWEFQEILIPELVH--NFEF 978
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAE 1018
D +LLPS +HR+ LL+A ++ L+ + G+E
Sbjct: 979 PADYWLKATLLPSALHRVHYLLLAEGIRVDLARNAQVGSE 1018
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 207/420 (49%), Gaps = 57/420 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
LL+ALTT+ + F+LER E+LGDAFLK+AV ++ H + EG LT + V+N NL
Sbjct: 1199 LLQALTTKSSADVFNLERFEVLGDAFLKFAVSVYILFRHTSWHEGYLTTCKGRMVSNRNL 1258
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFF---------ALGR------RCPRICS--KETERTIH 1126
L A L I+ PFDP + A+ R P + K TE I
Sbjct: 1259 LYCAMGYGLPGKIKAHPFDPKNDWVPPLSTVPGAVRRAMVDANESPALLYNLKLTEEEIQ 1318
Query: 1127 SQYDGRA------------PDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKA 1174
S +A P + + + K +ADV EAL+G + G++
Sbjct: 1319 SGVVAQATVDKFLPLIEQAPAPSQSTLHTVLQQVQIRDKVVADVTEALLGVCVKTVGYER 1378
Query: 1175 ATAFLKWIGIQVEFEASQVTNICISSK----SFLPLSASLDM-----ATLEILLGHQFLH 1225
+ FL +GI + + V + ++ + P+ +D +E LG++F +
Sbjct: 1379 SFRFLSHLGIIPK--GADVPMLLRTTTFPIGDYFPVRHKVDQLLCNPERIEATLGYRFRN 1436
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
R LLQAF H S+ N L G YQ+LEFLGDAVLD+L++ Y+Y P + PGQLTDLRS L
Sbjct: 1437 RTYLLQAFTHTSYTSNSLTGSYQQLEFLGDAVLDFLVSMYIYERNPSMSPGQLTDLRSAL 1496
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-------------MITPSSTREVK 1330
VNN A V V ++ ++ S +L++ I +V ++T S +
Sbjct: 1497 VNNVNLACVLVRNELHRHILSQSPMLTDAIGKFVAVHRCHRNQGSNWVRLLTEESDTPMA 1556
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
E PKVLGD++E+ +GAI LDSG +L W++ L D I F+ + +R+L E
Sbjct: 1557 EYVDVPKVLGDVLEALIGAIYLDSGNDLAATWEVCFRLLRDEIADFTRKTPIQVVRQLYE 1616
>gi|340960215|gb|EGS21396.1| hypothetical protein CTHT_0032530 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1596
Score = 209 bits (532), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 198/646 (30%), Positives = 285/646 (44%), Gaps = 88/646 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL ++A E+N I L TG GKT IA LL+ EL + + + + FL
Sbjct: 134 RDYQLELFERAKEQNTIAVLDTGSGKTLIAALLLRWTLQNELENRAKGMSRRVAFFLVDK 193
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
VALV QQ V+ ++ + + FCG + W+K + +V IL CL H
Sbjct: 194 VALVLQQHAVLACNLDYPIDKFCGEMIEDVEEDKSFWDKTFAENMAIVCTADILYKCLAH 253
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM--KVPRIFGMTASPVVGKGA 230
+I+M+ I LL+FDE HHA K NH YA+I+KDFY D+ K PRI GMTASPV
Sbjct: 254 SYIRMDEINLLVFDEAHHA--KKNHTYARIIKDFYV-DVEEDKRPRILGMTASPV----- 305
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
AQ + + LE LL A++ + D L+ ++ +E
Sbjct: 306 DAQVDPKVAAAELEGLLHAQIATAADPAALQYTLTR--------------------LKAE 345
Query: 291 QLAEIKR--EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----CLENLGVCGALHAS 344
++ E R + + + L+ Q L+ Q H F C E C +
Sbjct: 346 EIVEFDRRPDNWETPLN------QRLKMLVGQYEVFHKPFAFTETACAELGPWCADRYWQ 399
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPF 404
D E E + Q S V A DL P
Sbjct: 400 LFFREEDLARLEARCEMEILGVSAYRQDTREQVSRVRQAY--------DLVKNHEFGRPK 451
Query: 405 FSKKLL--RLIGILSTFRLQ-----QHMKCIVFVNRIVTARALSYILQNLKF-LASWRCH 456
S L ++I ++ R Q Q +CIVFV + TA L +LQ + + +
Sbjct: 452 LSTDSLSSKVIELVKVLRKQFEDPDQDPRCIVFVKQRNTASLLVDLLQQPEMHIEGLKSG 511
Query: 457 FLVGVNAG------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
LVG K RN +++I+ KFR G LN + AT V EEGLDI C ++IR+D
Sbjct: 512 MLVGSGRADAHWDNTKVSFRNQVRTII-KFRKGVLNCIFATSVAEEGLDIPDCNVIIRYD 570
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT- 565
L ET+ +IQSRGRAR S Y +V+ GN R + ED + R E + DR
Sbjct: 571 LNETLIQYIQSRGRARRHGSIYIHMVERGNPRHRRRLHENKANEDALRRFCEALPEDRKL 630
Query: 566 -----SSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
+ D F E ++ Y V +GA ++ + +L + S LPH P++
Sbjct: 631 TGNNFNMDYFLRKEMGQQQYIVPGTGAKLNYKQALVILANFVSSLPHPPETVLAPEYVIC 690
Query: 619 DDLGGTICHIILPANAPIHQIVGT--PQSSME--AAKKDACLKAIE 660
GG C ++LP +P+ G P+ +M +A + CLK I+
Sbjct: 691 AVPGGFQCEVMLPPQSPVRSATGKVHPRKAMAKCSAAFELCLKLIK 736
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 221/510 (43%), Gaps = 99/510 (19%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDI 982
+P+QP++ A+ + RNLL + ED DL P+ C L+I
Sbjct: 1001 NPQQPVVEAELMPLRRNLLDDNIGED-----------DLEPKQCFLVLEPLRISPLPAKT 1049
Query: 983 GSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQER 1036
P+I+HR+E+ L+A++ L+ G ++ ++ L+ALT E E+
Sbjct: 1050 AMMAYSFPAIIHRIESNLIALDACRLV------GLDIRPDLALEALTKDSDNTGEHDAEQ 1103
Query: 1037 FSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAA 1088
S ERLE LGD FLK A +F L +E E R + N NL A
Sbjct: 1104 ISFQPGMGNNYERLEFLGDCFLKMATTIAIFTLIPDKEEFEYHVERMLLICNRNLFNNAL 1163
Query: 1089 RNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH 1148
L+ YIR F+ ++ P + ++ +TI + H
Sbjct: 1164 EFKLEEYIRSMAFNRHSWY------PNNLTLKSGKTIQP-----------------RRTH 1200
Query: 1149 WLHKKTIADVVEALVGAFI----DDSGFKAAT--AF---LKWIGIQVEFEASQVTNICIS 1199
L K+IADV EAL+GA + D +G A AF ++ + V+ +++
Sbjct: 1201 LLADKSIADVCEALIGAALLTGQDRAGSTAPEQGAFDLAIRAVSTLVKSPRHSMSSYSEY 1260
Query: 1200 SKSFLPL--------SASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQR 1247
+ P SA +DMA LG+ F H LL AF HP++ + YQR
Sbjct: 1261 YSLYTPPAWQTAPCSSAQVDMAARFACRLGYTFRHPRLLRSAFQHPTYPSVYEHLPSYQR 1320
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGDA+LD I +L++ +P P LT+ + +V+NQ + F+K + S
Sbjct: 1321 LEFLGDALLDMAIVEWLFARFPGADPQWLTEHKMAMVSNQFLGCLGFMLGFHKNIACCSP 1380
Query: 1308 VLSETINNYVDYM---ITPSSTREVKEG--------------PRCPKVLGDLVESSLGAI 1350
+ + + YV M + + V+ G R PK L D+VE+ +GA+
Sbjct: 1381 QVGKDLARYVAEMEEALLAAKEDAVRAGKTEDDWARDFWLNCSRPPKCLPDVVEAYVGAV 1440
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
+DSG+N V + + P F +++L
Sbjct: 1441 FVDSGYNFGEVRAFLERHIRPF--FEDMRL 1468
>gi|358370394|dbj|GAA87005.1| dicer-like protein 2-1 [Aspergillus kawachii IFO 4308]
Length = 1396
Score = 209 bits (532), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 189/674 (28%), Positives = 315/674 (46%), Gaps = 83/674 (12%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P R YQ+E+ + +++ENIIV +GTG GKTHIA+L I + L P K I FL PT
Sbjct: 15 PAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALLRI--MKELESNPHKLIW-FLTPT 71
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ K I ++I + RT K W+ + + +V+V +L +
Sbjct: 72 VALCLQQFKFISDNIPAVRARTLTSLDKVELWTEQPIWDAILKEMQVVVSTHAVLADAMS 131
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
H F+K+ + L+IFDE HH + HP KIM+DFY P + + VP+I G+TASPVV
Sbjct: 132 HGFVKITQLGLIIFDEAHHCMRR--HPANKIMEDFYHPALERHGAEAVPKILGLTASPVV 189
Query: 227 GKGASAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYGPVIND---- 280
+ + +E+ LDA K + +E L + P ++ + PV+ D
Sbjct: 190 RSNK-------QELLKVESNLDAVCKTPRIHRSE-LMTHTHRPHLQQILFTPVLLDDLQA 241
Query: 281 ---TSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMK 329
T + V + ++ + YI L + D ++L+ QL R
Sbjct: 242 GSRTLKALVNAWTSM-RLEDDPYIKKLRKSPLDGRALQKVLESGKTYCNDQLKRFTTRSL 300
Query: 330 FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG 389
E LG A Y + + E ++ N++D S+ + + + + +
Sbjct: 301 HIFEELGEWAA---DYFIYASVEQLKTR----ADNSVD-SMGWTDEEKAYLLDIVSKLPT 352
Query: 390 IASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+ DL+ + + P S K L+ L T + + + ++F + T + +L
Sbjct: 353 PSIDLTPSDPDRIPI-SPKFRSLLEFLDT-KGEPNFSGLIFAKQRATVSVMEKLLSIHPV 410
Query: 450 LA-SWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+RC VG + G + + L +FR+G+ NL++AT V EEG+DI
Sbjct: 411 TKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISA 470
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNFSKE 553
C +V+ +D P + SF+Q RGRAR QS YA + + ++ E +I+ + +
Sbjct: 471 CSVVVCYDKPPNLKSFVQRRGRARHRQSTYAIMFSTDDESSALSKWEDLEQAMIEAYEDD 530
Query: 554 EDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
E R+ D + +A +V S+GA ++A V+ L+ +C+ LP + + +P
Sbjct: 531 ERRLR----DAWALEAINEEVVERLEVPSTGAVLTADTAVAHLNHFCAVLPRQPYASNEP 586
Query: 614 KFYYFDD----LGGTICHIILPANAPIHQIVGTPQ-----SSMEAAKKDACLKAIEDLHK 664
+F + D L GT+ LP+ +H V Q + AA+K+A +A + L++
Sbjct: 587 EFSFEKDDADLLRGTVT---LPSC--VHPGVRRTQGQRWWQTERAARKEAAFQAYKRLYE 641
Query: 665 LGALNDYLLPQEDN 678
G L+D+LLP + N
Sbjct: 642 FGLLSDHLLPFKRN 655
Score = 123 bits (309), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 157/355 (44%), Gaps = 39/355 (10%)
Query: 943 RNLLHNRKLE----DSESHELEEYFDDLPPELCQLKIIGFSKDI-GSSLSLLPSIMHRLE 997
RNLLH + L D+E+ + + E C + + +++ I G +S+ I+ RLE
Sbjct: 854 RNLLHRQTLAAKQLDTETPDNSSKIRLILAENCTIDKLPYAETIFGRFISV---ILDRLE 910
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
LVA L + S ++ A+T Q + +R E GD+ LK+ V
Sbjct: 911 ATLVATRLCETILRDLEFS---SIRHVITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQ 967
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF H EG L++ R V NS L + A L +I ++ F P ++ A P I
Sbjct: 968 LFFQHPNWHEGYLSQGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWTA-----PLIS 1022
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
K + + + K +ADVVEAL+GA D GF AA A
Sbjct: 1023 EK---------------------ISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHA 1061
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+ +V E T S +L+ L +G+ F H+ LL+++ HPS
Sbjct: 1062 CIHRFLPEVNLEHIDRTTTTAPSTPEGTTKHTLNDDHLMTHIGYTFTHKSLLVESLTHPS 1121
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
F+ YQRLEFLGDAVLD I S L S ++ GQ+T ++ +VN A
Sbjct: 1122 CQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPHEIPQGQMTKIKHAVVNANLLA 1176
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 21/136 (15%)
Query: 1229 LLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
++ A PS L YQR EF GD+VL + ++ L+ +P G L+ R +V N
Sbjct: 934 VITAITAPSAQSLTN-YQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSQGRDEIVQNSR 992
Query: 1289 FANVAVDQSFYKFLI--------FDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLG 1340
A A+D F++ + + ++SE I+ +TP K+ KVL
Sbjct: 993 LARAALDAGLDAFIMNKMFTPRKWTAPLISEKIS------LTP------KQRTMSTKVLA 1040
Query: 1341 DLVESSLGAILLDSGF 1356
D+VE+ +GA +D GF
Sbjct: 1041 DVVEALIGASYIDGGF 1056
>gi|403179647|ref|XP_003337961.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165151|gb|EFP93542.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1460
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 220/831 (26%), Positives = 366/831 (44%), Gaps = 96/831 (11%)
Query: 45 SVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ 104
S G D +I R YQ EL ++A + NII+ TG GKT +A+ LI +A + P
Sbjct: 8 STGGGLHPPDTMKIPRLYQAELLEEAKKRNIIIRADTGTGKTFVALSLITWIA--AQSPA 65
Query: 105 K----SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVL 159
I FLAPT L QQA+ I++ +V+ + G + + D W E+++ +V+
Sbjct: 66 NHDDHRIQAFLAPTRPLAHQQAEYIQKHCTLRVKAYTGDLQPELWNIDKWHSELNEVDVI 125
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVP 215
V QI + + K+E ++LLIFDE HH + NH Y +IM+ Y K +++P
Sbjct: 126 VSTAQIFYDLISKGYWKLEDVSLLIFDEAHHC--RKNHIYNQIMRSHYHRLAKDPTVRLP 183
Query: 216 RIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVVRVYQY 274
+I G+TASP+ +A+ I SL++ L A++Y V+ ED+ P +V +
Sbjct: 184 KILGLTASPIWNYKDLERAD--SDIKSLQSALAAQIYEVKTHTEDVCQHNFKPNEKVVYF 241
Query: 275 GPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLEN 334
P +S+ + +++ L H S + + + + +
Sbjct: 242 EPSPEFEKNSHPPWDQ-------------INQLLSLHASPK-MIAAMESVSLELGTYAHS 287
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
L V L + + + ++ M L++ Q EV + +L
Sbjct: 288 LAVLDWLKSLLTVGASNQAMPGRLLDPNKQ----------KQIREVIQEL-------EEL 330
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQ-NLKFL 450
I+ + E FS K+ L IL +++ + + CIVFV R A+ L ++L+ N +
Sbjct: 331 VNIDDIPETQFSSKVAVLNKILVSYKEKDNHDNFLCIVFVERRQHAQLLPFLLERNAQLK 390
Query: 451 ASWRCHFLVG-----VN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTC 503
R L G VN G+K SR K++ KFR+GE NL +AT V EEGLD ++C
Sbjct: 391 GFLRPTALTGHAGGNVNDLIGIKMDSRTQNKAV-AKFRTGEYNLTIATSVAEEGLDFRSC 449
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM-----N 558
+VIRFDL T +IQSRGRAR +S+Y ++ +G + F+ +E+++ N
Sbjct: 450 RVVIRFDLITTWKGYIQSRGRARARESDYIVMLPNGTTNKY---LEFTGKEEQLKAALYN 506
Query: 559 REIMDRTSSDAFTCSEERIYKVDSSGACI-SAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
R + + + I ++ I + SLL+ C +P DEF Y
Sbjct: 507 RPEDELIEEGEEEWTPQLICQLAGGKESILTYSAATSLLNDVCQLIPPDEFLPVVAPQYE 566
Query: 618 FDDLGGTI-CHIILPANAPIH----QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
LG C + LP A +H G ++ + AK+ A +A + L +L LN +
Sbjct: 567 ITWLGDNFQCQVTLPPMAALHPSQRTFTGLAMATKKDAKRSAAFEACKVLRELDVLNQHF 626
Query: 673 LPQEDNATEDEPMLFSSDSDSYEGEGSR-GELHEMLVPAVLRQSWTKSQYPVRLNFYFMQ 731
LPQ + + D+D E E + + E ++P V T ++ + +
Sbjct: 627 LPQREGKSAQ-----ICDADGREIEATPLSDQVEAIIPNVYGDFRTSTE------IWLHK 675
Query: 732 F-IPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLAR-GRSVMTKLVPSGIMQAQQFQ-- 787
F PD + + GL A HL V L ++ +P I Q+++ Q
Sbjct: 676 FSFPDDSPDGFSTMGLLC-------ARHLTVPDGLQLFDHYTDSRPLPITIEQSKRIQWG 728
Query: 788 EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKII 838
+ L R E S V + ++L+ P++ +DW ++
Sbjct: 729 QDDAPTNLQRLETFSRVVMQAAINRKAYEGKLYFLVAPLLRDTCEIDWNLV 779
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 229/504 (45%), Gaps = 58/504 (11%)
Query: 951 LEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
L SES ++ + LP +LC K + + S LPS+ L + L A L L
Sbjct: 879 LSKSESTVVQPHRILLPLKLC--KGTHIPRSMWKVFSYLPSLTRLLHDSLQATTLFKRLD 936
Query: 1011 ASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
FP +S ++ALT + + LE LGDAFLK A H++L H EG++
Sbjct: 937 --FPT---ISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHVYLSHLKKGEGDM 991
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD 1130
+ RS +V+N+ L + A + NL I Q F R R +TE D
Sbjct: 992 SHVRSRSVDNAYLRRKAIQANLPASILSQRF----------RTDRFRDPQTE-------D 1034
Query: 1131 GRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FID---DSGFKAATAFLKWIGIQV 1186
G+ + N + + K+ ++DVVEAL+GA F+ + G K TA G
Sbjct: 1035 GKELPNGNFSRK-------IPKRVLSDVVEALLGAGFLTGGIELGLKIGTALDLCFGGTA 1087
Query: 1187 EFEASQVTNICISSKSFLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGG 1243
+ V NI + S + L S L LE +G+ F + LL+QA H S N +
Sbjct: 1088 PWSERPV-NIGLESITHDALEPSTLLKCQALEEKIGYVFKEKLLLVQALTHRSANSFMTN 1146
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
CY+R E+LGDAV+D I + Y + +LT R+ +V+N + +A+ + + +I
Sbjct: 1147 CYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFLALKKLGLQEII 1206
Query: 1304 FDSNVLSETINNYVDYMITPSSTRE----------VKEGPRCPKVLGDLVESSLGAILLD 1353
++ E I P + E V P PK+L D++E+ +GA+ +D
Sbjct: 1207 MHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFDP--PKILNDVLEAIVGAVFVD 1264
Query: 1354 SGFNLNTVWKIM-LSFLDPILKFSNL-QLNPIRELLELCNSYDLDLQFPSLKKGGKFLAE 1411
SGFNL + ++ + + F D I S L +P+ +L L + Y Q L++ + E
Sbjct: 1265 SGFNLQSAYRTLDIIFEDVIPGLSRLVARDPLSTMLRLRDQY----QCAELRRISTTIRE 1320
Query: 1412 AKVTGKDKD-VFISACATNLSRKE 1434
G+ KD + + C L +E
Sbjct: 1321 PNPNGETKDPISVKVCRIELHGQE 1344
>gi|391348645|ref|XP_003748555.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1461
Score = 208 bits (530), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 182/657 (27%), Positives = 298/657 (45%), Gaps = 86/657 (13%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICI 109
AR YQ+EL + A + N IV LGTG GKT I+VLL+ H + +P +
Sbjct: 26 ARSYQIELFEFAKKHNTIVCLGTGTGKTFISVLLVKHFEHEVAGPWIEGSYGEPIGKRTV 85
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILL 167
FLAP+V LV+QQ+ V+ + + KV ++ G + R S +W +E ++ VLVM P++
Sbjct: 86 FLAPSVPLVEQQSAVLAQHMTVKVASYVGSMDTDRWSSE-NWNREFNENGVLVMTPEVCR 144
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-PDIMKVPRIFGMTASPVV 226
+ H F+ ME I LL+ DECH A + PY KIM+++ D + PRI G+TAS V
Sbjct: 145 IAIDHGFLPMENINLLVLDECHRAT--GDDPYVKIMENYANLGDKSRRPRILGLTASVVN 202
Query: 227 GKGASAQANLPKSINSLENLLD--AKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
K + K I LE LD AK S+ ++F + P + + P +D
Sbjct: 203 AKVQGFEVQ--KKIRDLEACLDSVAKTSSL----SAQNFGTKPTEIIVTHHP--HDAEKQ 254
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS 344
+ ++ AL D+ R K L + + CG A
Sbjct: 255 LPIDAAKM----------ALLEDCADYTEFRRNMKALASTYHT----------CGPYCAK 294
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRFASQAS---EVFAAICRRDGIASDLSCIEVLK 401
++ + ++ L + D F A E+F + G L +
Sbjct: 295 VLVEFRERELQKAL------QLPDCAQGFKDHAHIKFEIFKELYEFLGDCPSLHDV---- 344
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF----LASWRCHF 457
++ RL+ ++ F + ++ +VFV + A L ++ L A RC F
Sbjct: 345 ----PPRMTRLLEVIRRFE-KTNLSAVVFVKERLVAYVLYNWMRQLSVEDSSFAFIRCSF 399
Query: 458 LVG---------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+VG ++ M+ A +++ FR+GE NL+ AT V EEG+D+ C L+IR
Sbjct: 400 IVGQAQINYAREIDPESLKMNSKAQNKVMKNFRNGEYNLMFATSVIEEGMDVPACNLIIR 459
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI--MDRTS 566
FD P V S+ QS+GRAR S Y L ++ + + + +E +++ + +R +
Sbjct: 460 FDPPMDVRSYTQSKGRARAKPSLYVVLSSESDRLMTEALLDSYQETEQLVMKCCGTERIA 519
Query: 567 SDAFTCSEERIYKVD-----SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL 621
AF +E+ + D A I+A +S+++ YC + ++ N P F +
Sbjct: 520 PTAFETAEKFVDDPDLPPYVYGRARITAKSAISIIYGYCQRFMRLKYPNLFPFFDMEETP 579
Query: 622 GGTICHIILPANAPIHQIVGT---PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
G +C + +P P+ + + P S + AK L+ + LH+ G L D LLP+
Sbjct: 580 DGFVCTLSMPIVCPVKEKISNRARPFPSKDKAKSYVALEMCKRLHQCGELADNLLPR 636
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 149/355 (41%), Gaps = 65/355 (18%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L+KALTT C+E F LERLE+LGD+FL+ + + EL R VNNS+L
Sbjct: 1089 LMKALTTRGCEEIFDLERLELLGDSFLQIVSTFAVMDWYPDKSISELNVLRQYEVNNSHL 1148
Query: 1084 LKLAARNNLQVYIRDQPFDPC-QFFALGRRCP---------------------------- 1114
L A L + QPF F G R
Sbjct: 1149 LYRAHEKGLTQVLEAQPFRASYNFLPFGHRTAPFEQKLLQREFLCCLVKHWGFEAVSSVP 1208
Query: 1115 -----RIC----------SKETERTIHSQYDGRAPDDLNAEVRCS---KGHHWLHKKTIA 1156
R C ++ E I++ D + D + R + H K
Sbjct: 1209 RLKDLRFCKNIQEALNHFAESGEEKINAYVDEKIYDSEDLPKRHEIPVRSFHDFKAKIGG 1268
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMA--- 1213
DVVEA+ G +++ G A F KWIG +F ++ N + K L SA+ +
Sbjct: 1269 DVVEAMAGVYLEKCGPVGALRFFKWIG--KDFGDTETNNFLDAFK--LDFSAAQKVPPEQ 1324
Query: 1214 ---------TLEILLGHQFLHRGLLLQAFVHPSFNR--LGGCYQRLEFLGDAVLDYLITS 1262
+E +G++F RGL LQA H S L +L F+G+AV+DYL+T
Sbjct: 1325 MRQYSHLIDKVERQVGYKFKSRGLALQAITHHSCREHLLTDDMDKLAFVGEAVIDYLLTL 1384
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
Y+Y + L PGQLTDLRS L+N Q A V + L+ SN L I Y+
Sbjct: 1385 YIYGLSTSLNPGQLTDLRSALINKQVTAYAVVRAELHTVLLHTSNKLFSAIKKYL 1439
>gi|194744012|ref|XP_001954492.1| GF18290 [Drosophila ananassae]
gi|190627529|gb|EDV43053.1| GF18290 [Drosophila ananassae]
Length = 2252
Score = 208 bits (529), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 246/538 (45%), Gaps = 115/538 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1726 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1785
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1786 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1845
Query: 1115 -------RICSKETERTIHSQYDGRAP-----DDLNAEVRCSK----------GHHWLHK 1152
+IC E+ + P DD N C+ H +
Sbjct: 1846 IKNLSSVQICELVREKAEALGLEQNGPQSGQLDDSNDS--CNDFSCFIPYNLVSQHSIPD 1903
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------EFEASQVTNICISSKS---- 1202
K+IAD VEAL+GA++ + G + A F+ W+GI+V E + + SSKS
Sbjct: 1904 KSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPFTRQPAEQEEAKRVPGSSKSDAEG 1963
Query: 1203 -----------------FLP-LSASLD-----MATLEILLGHQFLHRGLLLQAFVHPSF- 1238
F P + LD E LG++F R LLQA H S+
Sbjct: 1964 MVTVYGAWPTPRSPLLHFAPNATGELDQLLSGFEEFEASLGYKFRDRSYLLQAMTHASYT 2023
Query: 1239 -NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS 1297
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 2024 PNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHG 2083
Query: 1298 FYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPKVLGDLV 1343
F+KF S L++ I+ +V I + + E PK LGD+
Sbjct: 2084 FHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDVF 2141
Query: 1344 ESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFPS 1401
ES GAI LDS +L+ VW++ + + P I +FSN + +PIRELLEL P
Sbjct: 2142 ESIAGAIFLDSNMSLDVVWQVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EPE 2192
Query: 1402 LKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 2193 TAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 2250
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L NLKFL RC + A + + A +
Sbjct: 494 LIYCNQNHTARVLFELLAEMSRRDPNLKFL---RCQYTTDRVADPATEPKEAELEHRRQE 550
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T + EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 551 EVLKRFRMHDCNVLIGTSILEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 610
Query: 535 LV 536
LV
Sbjct: 611 LV 612
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 192/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 817 TGASVDLGSAIALINKYCARLPSDTFTKLTALWRCTRSERAGKTLYQYTLRLPINSPLKH 876
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QE------------DNATEDE 683
IVG P + A++ A L+A +LH++G L+D L P +E D EDE
Sbjct: 877 DIVGLPMPTQTLARRLAALQACAELHRIGELDDQLQPIGKEGFRALEADWECFDLEPEDE 936
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
+L SD + G R + + + + + P L YF+Q IP+
Sbjct: 937 QILQMSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 993
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ + V+T I
Sbjct: 994 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKEQVVLTS---EQI 1050
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI---FHKNSVDWKI 837
F +L +F F P S+ ++P + +DWK
Sbjct: 1051 GCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKMPAGGKMIDWKF 1102
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ V G ++ R+ + + + V + ++ V I
Sbjct: 1103 LD------VIQANGNTLPREVPDEERLAKPFDAQCFQDAVVMPWYRNQDQPQYFYVAEIC 1156
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + YG+++++ QPLL N L NRK
Sbjct: 1157 PHLSPLSCFPGEQYRTFKHYYYAKYGLNIQNSSQPLLDVDHTSARLNFLTPRYVNRKGVA 1216
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1217 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1274
Query: 1005 LKHLLSASFPEGAE 1018
++ +S G +
Sbjct: 1275 IRKQVSTDLGLGQQ 1288
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 1199 SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDY 1258
+S S LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1702 TSFSTLPKGFSFDRQP--GLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKY 1758
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1759 AITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1803
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R K +V L
Sbjct: 18 RDFQVELLASAFERNTIICLGHRSSKEFIALKLLQELSRRARCRGKV-------SVYLST 70
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
Q + E + + + + + + D + D Y V ++ P+ + L R +
Sbjct: 71 QVGRNTEPTSIYTMLSHLTDLRVWQEQPDMQVPFDHCWTDYNVSILRPEEFISLLEAREL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH ++V Y +I+ ++ I+ PRI G+ A P+
Sbjct: 131 LLSSVELIVLEDCHDSEV-----YRRILP-LFEDHILPAAHHDRPRILGL-AGPLHSAEC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-ELSAMLATLERNILCRIETASDIVTVLRYCSRPHEYIVQCAP 228
Score = 44.7 bits (104), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1979 LHFAPNATGELDQLLSGFEEFEASLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2036
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2037 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2089
>gi|167046036|gb|ABZ10549.1| dicer 1 [Nematostella vectensis]
Length = 412
Score = 208 bits (529), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 204/397 (51%), Gaps = 50/397 (12%)
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
+E+LL+ALTT+ + F LERLE+LGDAFLK AV L+ + DEG+LT+R+++ ++N
Sbjct: 17 SELLLQALTTKSAGDAFDLERLEMLGDAFLKQAVSIFLYCCYKDGDEGKLTKRKTSQLSN 76
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI-------CSKETERTIHSQYDGRA 1133
L ++A R L Y+++ D + + + S++T Q R
Sbjct: 77 RALYRVACRLGLPEYLQNTQLDRVSWTTPSLQAAEVEPVGSPGKSQKTASNKRCQSASRQ 136
Query: 1134 PDDLNA--------EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ 1185
P++ R H + K++AD VEAL+GA++ G++ A FL W+G++
Sbjct: 137 PENRPEMSTLEKPETARDKALHQSIPDKSVADSVEALIGAYLTTCGYQGALHFLDWLGVK 196
Query: 1186 VEFEASQVTNICISSKSFLPLSA----------------SLDMATLEILLGHQFLHRGLL 1229
V E+ T+ +S + + ++ + E +G++F ++ L
Sbjct: 197 VLPESPMSTDGPRASSKYSIFTRPTITEYNSNPQVLKRFAVQLQGFENRIGYEFSNKLYL 256
Query: 1230 LQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
+QA H S+ NRL CYQRLEFLGDA+LD+L+T +YS L PG+LTDLR LVNN
Sbjct: 257 IQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLDPGELTDLRQALVNNN 316
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------------ITPSSTREVKEG 1332
FA +AV F K L S I +VD++ +T S+ E EG
Sbjct: 317 IFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQISKDPFLTLSNDDE--EG 374
Query: 1333 PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
PKVLGD+ ES GAI LDSG +L W++ L
Sbjct: 375 IEAPKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRML 411
>gi|195502701|ref|XP_002098342.1| GE24009 [Drosophila yakuba]
gi|194184443|gb|EDW98054.1| GE24009 [Drosophila yakuba]
Length = 2250
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 178/539 (33%), Positives = 248/539 (46%), Gaps = 116/539 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1723 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1782
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1783 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1842
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G P DD N C+ H +
Sbjct: 1843 IKNLSSVQICEMVREKAEALGLEQNGGVPNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1900
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE------FEASQVTNICISSKSF-- 1203
K+IAD VEAL+GA++ + G + A F+ W+G++V EASQ I S+K
Sbjct: 1901 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDEASQEHRIPGSTKPNPE 1960
Query: 1204 ----------LPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
P S L A E LG++F R LLQA H S+
Sbjct: 1961 NMVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFDEFEESLGYKFRDRSYLLQAMTHASY 2020
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 2021 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2080
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPKVLGDL 1342
F+KF S L++ I+ +V I + + E PK LGD+
Sbjct: 2081 GFHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDV 2138
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFP 1400
ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 2139 FESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EP 2189
Query: 1401 SLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 2190 ETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 2248
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 494 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 550
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 551 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 610
Query: 535 LV 536
LV
Sbjct: 611 LV 612
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY-YFDDLGGTICH---IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + ++ G + + LP N+P+ H
Sbjct: 815 TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLYQYTLRLPINSPLKH 874
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 875 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 934
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 935 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 991
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 992 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 1048
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 1049 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKTPAGGKHIDWQF 1100
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1101 LE------LIQANGNTMPRAVPDEERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1154
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1155 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1214
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1215 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1272
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1273 IRKQVSADLGLGRQ 1286
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ + + ++L+ V
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRARQ-RGRVSVYLSCEVGTST 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ + + + T + + D + D Y V ++ P+ L L R +
Sbjct: 77 EPCSI------YTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLSLLEDREL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH + V Y +I + ++ IM PRI G+ A P+ G
Sbjct: 131 LLSSVELIVLEDCHDSAV-----YQRIRR-LFEEHIMPAAAVDRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE ++ ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLATLEQSVNCRIETASDIVTVLRYCSRPHEYIVQCAP 228
Score = 50.1 bits (118), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1700 SSAILPTGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1756
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1757 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1800
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAI-ELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1977 LHFAPNATEELDQLLSGFDEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2034
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2035 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2087
>gi|238497846|ref|XP_002380158.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
gi|220693432|gb|EED49777.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
Length = 1339
Score = 207 bits (527), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 193/667 (28%), Positives = 300/667 (44%), Gaps = 80/667 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK--PQKSICIFLAPTVAL 117
R+YQ E+ + +++ENIIV + TG GKT IA+L I AH + PQK + FL PTVAL
Sbjct: 17 RQYQYEMFEASLKENIIVAMDTGTGKTQIALLRI---AHQLEGGGPQK-LTWFLTPTVAL 72
Query: 118 VQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
QQ +VI + + T G K R KS W++ + +V+V +L L H F
Sbjct: 73 CLQQYEVIRSHLPAVRACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALTHGF 132
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKG 229
+++ + LLIFDE HH + HP IM DFY P + K VP I G+TASPVV
Sbjct: 133 VRISQLGLLIFDEAHHCMRR--HPANMIMLDFYHPTLRKHGRDSVPCILGLTASPVVRSK 190
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ L +++S+ K V E L ++ P + Y + +
Sbjct: 191 SQEMKTLESNLDSI-----CKTPQVHKQE-LTTYAHRPELLPIIYKAIDEGPGGRALQAL 244
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL-----------GVC 338
E + I + + SL N + + L C E +
Sbjct: 245 EHAWDTAD---IDGDPDAIPQNGSLLNGSGEYKALMVRKTLCNEQIKRFVDRSRHIFAEL 301
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
G A Y + + E +R + D SL + + S L E
Sbjct: 302 GEWAADYYICTSVEQLRTTIR-------DQSLTMDWEDEERAYLS-----NFLSKLPVAE 349
Query: 399 V---LKEP---FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKFLA 451
V L +P S KL LI L F ++FV + VT L+ +L + +
Sbjct: 350 VQANLADPNNFTMSPKLAALINFLDKFD-DPEFSGLIFVKQRVTVSVLARLLSLHPQTRD 408
Query: 452 SWRCHFLVGVNAG-----LKSMSRNAMK--SILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+RC VG++ G + NA K ++ FRSG NL+V T V EEG+D+ C
Sbjct: 409 RFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVTTSVLEEGIDVTACR 468
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNFSKEED 555
+V+ FD P + SFIQ RGRAR +S YA + + ++ E +++ + EE
Sbjct: 469 VVVCFDKPANLKSFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQILEQAMVEAYQDEE- 527
Query: 556 RMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF 615
R + + + +A + + V+++GA I+ V+ L+ +C+ LP + + + +P+F
Sbjct: 528 ---RRLREAEAQEAVDENVPEMITVEATGAVITPDSVVTHLYHFCAVLPEERYVDNRPEF 584
Query: 616 YYFDDLGGTI-CHIILPA--NAPIHQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDY 671
+ D G I +ILP+ + + +I G S AA K+ +A L++ G LND+
Sbjct: 585 SFEKDRQGLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVKETAFQAYRALYEFGLLNDH 644
Query: 672 LLPQEDN 678
LLP N
Sbjct: 645 LLPLTKN 651
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 176/472 (37%), Gaps = 116/472 (24%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEY------FDDLPPELCQLKIIGFSKDIGSSLS 987
+ +P+ R RN LH L++ ++ + E + E C + + S I
Sbjct: 840 IECRPIPRRRNFLHPPALDNGQADAIVESEHGSAKVHMVAAESCTVDKLPVSTAIFGLF- 898
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+P I+ RLE+ L+A L + + + ++ A+ Q + +R E LGD
Sbjct: 899 -IPHIVDRLESTLIA---NRLCATILCDVGFADIQHVITAIMAPSAQGVTNYQRYEFLGD 954
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LKY V LF + EG LT R+ V N L + A L +I + P ++
Sbjct: 955 SILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIITKALTPRRWI 1014
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
A P I ++ + Q + K +ADV+EAL+GA
Sbjct: 1015 A-----PLISTRVGAAPVKRQ---------------------MSAKVLADVIEALIGAAY 1048
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL--SASLDMATLEILLGHQFLH 1225
D G A IC + FLP LD+ +L H
Sbjct: 1049 LDGGHSKA-------------------QIC--THCFLPEVNRQPLDIPSLITQTEHGRTA 1087
Query: 1226 RGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
R ++ EFLGDA+LD +I ++ K+ PG +T ++ +VN
Sbjct: 1088 RQII------------------DEFLGDAILDMVIVPIIFQYSNKISPGDMTLIKHAVVN 1129
Query: 1286 NQAFA----NVAVDQS----------------------FYKFLIFDSNVLSETINNYVD- 1318
+++Q ++F+ F+S L + + +D
Sbjct: 1130 ANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLDLQTSRDAALDR 1189
Query: 1319 -YMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLN 1359
+ + GP P K D+VES LGAI +DSG +L+
Sbjct: 1190 HRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSGGDLS 1241
>gi|242019168|ref|XP_002430037.1| dicer-1, putative [Pediculus humanus corporis]
gi|212515099|gb|EEB17299.1| dicer-1, putative [Pediculus humanus corporis]
Length = 701
Score = 207 bits (527), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 189/638 (29%), Positives = 307/638 (48%), Gaps = 65/638 (10%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+ R YQ EL + A ++N I+YL TG GKT IA+ ++ I+KP F+ T
Sbjct: 1 MIRNYQAELIEIAKKQNSIIYLPTGTGKTLIAIQVLLSKTQEIKKPYNEGGKRVFFIGAT 60
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
LV Q AKV+ FK+ + G + D W E + +V+V+ +IL L +
Sbjct: 61 KVLVYQLAKVLCTHTKFKIGYYTGDMNVDSWNKDIWLGEFLKKQVMVLTAEILKGLLTLK 120
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
FI E I+L++FDECHH + NHPY +IM++F K+P I G++A+ + K +
Sbjct: 121 FIGAENISLIVFDECHHGTL--NHPYKRIMQEFKDLPDSKLPLILGLSATLL--KMNIKK 176
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
++ S+ +E AK+ S+ + D+ ++S V ++ Y +N T S +E L+
Sbjct: 177 TDIEISLREMEETYRAKIISISENSDITRYMSVCVEKILNYN--LNTTHS----INEVLS 230
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG-ALHASYILLSGDE 352
++D ++ + LN + ++ + L LG+ G +L A Y ++
Sbjct: 231 --------------IYD-DVIKVIEETLNFVLENARTSLLELGIFGGSLSALYYMI---- 271
Query: 353 TMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRL 412
EL + + D C+ A + I + + L F S K+ L
Sbjct: 272 ----ELDKIRLLSTDPVHCQILIYAKTELSMIMEDEEESGQLIY------DFSSGKVKLL 321
Query: 413 IGILSTFRLQQHM--KC-IVFVNRIVTARALSYILQNL----KFLASWRCHFLVG---VN 462
I + + + KC +VFV+R TA L++I+Q L K S + F+V +N
Sbjct: 322 IDTIRDYFNSDNFDFKCGLVFVHRRQTALLLAFIMQRLRGCDKNFESVKPEFMVASSYMN 381
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
+SR I+++ SGELNL+ AT + EEG+D+ C LVI FD P+ +S+IQSR
Sbjct: 382 NDFVDISRKK-NEIMKRMASGELNLIFATNILEEGIDLPACNLVISFDFPKGYSSYIQSR 440
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS-SDAF--TCSE-ERIY 578
GRAR S Y D ++ LI + E +N I S D + C++ E I
Sbjct: 441 GRARNENSIYYIFSDENEKKNEKLIDEYRDFEKTLNERIRGEISLPDVYLEKCNKNETIS 500
Query: 579 KVDSSGACISAG-YGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTICHIILPANAP 635
V S A G ++ + +YC +LP D F P+ +Y F ++ LP N+
Sbjct: 501 IVGKSDAIFVDGCMAIACVEKYCGQLPQDMFTFLCPEIFYKKFGEMKRAFLK--LPFNSG 558
Query: 636 IHQIV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
I ++ G +S+M+ AKK +K ++ LH+L ++D L
Sbjct: 559 IPDVIEGDLKSNMKEAKKSVFMKTVKLLHELNLIDDSL 596
>gi|350399948|ref|XP_003485689.1| PREDICTED: endoribonuclease Dicer-like [Bombus impatiens]
Length = 1490
Score = 207 bits (527), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 249/1006 (24%), Positives = 437/1006 (43%), Gaps = 179/1006 (17%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPT 114
I R YQ++L + A +EN+I+YL TG GKT IAV+LI EL+ IR+P IF+ T
Sbjct: 9 IPRPYQIDLFETACKENVIIYLPTGAGKTFIAVMLIKELSADIRRPYAEGGKHTIFIVNT 68
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ+ I+ G T H + W + ++Q+EVLVM QIL+ L H
Sbjct: 69 VPLVIQQSDYIKRLTGLSCGTLSSEEGVDFWHDEEWNEHLNQHEVLVMTSQILVNALCHG 128
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
+I + I L+IFDECH A ++HP +IM+ F + PR+ G++AS + ++ +
Sbjct: 129 YIFLNRINLIIFDECHRA--VNDHPMRQIMQLFENCPKEEQPRVLGLSASLL---NSNVR 183
Query: 234 ANLPKSI-NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+S+ SLE +A++ + A+ +S+ +SP+ + Q+ I D + + +
Sbjct: 184 LKKVQSVMQSLEVTFNARIATATVAD--KSYYASPIEEIIQFDQHIIDDVGECI--NNII 239
Query: 293 AEIKREQYISALSRKLHDHQSL-----RNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
E++ AL L ++S + T+K+L+ + ++++ G+ GA +
Sbjct: 240 KEVELILNCIALKDNLKYNESSAEFRPKTTSKKLSGILRNIQYHFLRTGIYGASKCVLLH 299
Query: 348 LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF-- 405
L E ++ +IDD + + CR+ + D KE +
Sbjct: 300 LIQLEYLKK--------SIDDVETLYILEYLITNVINCRK--LLEDKMKGSPEKERIYNY 349
Query: 406 -SKKLLRLIGILSTFRLQQHMK----CIVFVNRIVTARALSYILQNL-------KFLASW 453
S ++ +L+ L F +H CI+FV R TA+ L IL+++ KFL
Sbjct: 350 SSDQIRKLLKALKDFYNNKHHDQVFCCIIFVQRRFTAKILYQILKSISLHDEEYKFLHP- 408
Query: 454 RCHFLVGVNAG--------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
F++GV++ L RN K +L +FR+G LN +VAT V +EG+D+ C L
Sbjct: 409 --EFVMGVSSNPFKNPKELLCVSERN--KEVLLRFRNGLLNCIVATDVIDEGIDVPKCSL 464
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT 565
+IR+DLP V ++IQS+GRAR S Y L+ + + L + K E + + ++D+T
Sbjct: 465 IIRYDLPMDVRTYIQSKGRARHAYSRYVVLLQKDDSQYLRRHNEYKKIEQHLKQLLVDKT 524
Query: 566 SSDAFTCSEE-------------RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
E ++ D CI+ ++++++YC+ L +F
Sbjct: 525 DERNVPTENEIQSELYQHDIEPYQVISDDGQVCCITEQMAINVINQYCTSLLKSKFACLS 584
Query: 613 PKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
P + H I P++Q + ++ LH L A Y
Sbjct: 585 PIW---------TLHKISNNYPPLYQFPSALYGAFPLPQETVY------LHILHATPKYP 629
Query: 673 LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF 732
P DN + + + G L +P + +P+ FM+
Sbjct: 630 APHHDNR-------YLTFYNLLHNSAGFGILSTKQMPEI-------PSFPI-----FMRV 670
Query: 733 IPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK 792
GE L +D+ + + ++T+ ++ ++F +
Sbjct: 671 ---------------------GE---LNIDVKVNHAKMILTE---EEVIYLKRFHTLIF- 702
Query: 793 VILDRSEFNSEFVPLGKD----DYCESSSSTFYLLLPVIFHKNSVDWKI---IRRCLSSP 845
S+ VP+ K D C + +L++PV + DW I + + SS
Sbjct: 703 ---------SDIVPVIKTFMVFDNCNRDNC--FLIVPV-----NEDWDINWEVTKQYSSI 746
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-FYLVTNIVFEKNGYS 904
+ +P KS SD E +LV ++ Y+VT + + S
Sbjct: 747 EYISPPIPFRFKS----------------SDYELALVKPNYRAADTYIVTQVCDDIMPSS 790
Query: 905 PYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFD 964
+ S+++ + + + + + +QP+L K + R + + R D + +E+
Sbjct: 791 CFPTDHFSTYIHYYKEKHRLVINNLEQPMLEVKSISRAIDYIMPR---DKSTESKKEH-- 845
Query: 965 DLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
L PELC I F + LPSI+HR+ LL+A +L+++++
Sbjct: 846 -LVPELCIR--INFPALYWLKATTLPSILHRVSQLLIAEDLRYIIA 888
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 198/420 (47%), Gaps = 70/420 (16%)
Query: 1030 TEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAAR 1089
T+ + F+LERLE LGDA+LK+ L+ EG LT + + N NL +
Sbjct: 1019 TKTGHDAFNLERLETLGDAYLKFITSLFLYNEFPKHSEGYLTALKGKIIGNRNLYYCGIK 1078
Query: 1090 NNLQVYIRDQPFDPCQFFAL---------------GRRCPRI---------------CSK 1119
N+ ++ F P F + P + S+
Sbjct: 1079 KNIPGCMKVDSFIPLSNFIAPAYTVYRQVQDVLLHAKVSPNVLYEIEIPRDEQLSGHISE 1138
Query: 1120 ETERTIHSQYDGRAPDDLNAEVRCSKGHHW----LHKKTIADVVEALVGAFIDDSGFKAA 1175
T+ I + + D AE + H+ + KT+AD VEAL+G ++ G K
Sbjct: 1139 ATKNAIQT----KILDWETAEAQTGMEHYLGIQTVSDKTVADCVEALIGVYLRSMGIKDT 1194
Query: 1176 TAFLKWIGI-QVEFEASQV-----TNICISSKS---FLPLSASLDMATLEILLGHQFLHR 1226
L+W I + +A+++ N IS + +P ++++ E LG++F +R
Sbjct: 1195 LILLQWFQILPYKIDANELLFGTPQNPIISEGNINHLMPWASNI-----ETKLGYRFNNR 1249
Query: 1227 GLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
G LLQAF HPS+ N + CYQRLEFLGDA+LD+LIT+Y+Y L PG LTDLRS LV
Sbjct: 1250 GYLLQAFTHPSYTPNNMTECYQRLEFLGDAILDFLITNYIYESCGNLNPGALTDLRSALV 1309
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITPSSTREVKEGPRC--- 1335
NN FA + V + L+ + L+ I +V +Y + + E C
Sbjct: 1310 NNITFACLTVRHGLHIALLSYAPKLNNIIERFVKFQEERNYAVNDELLWILLEEDECNMA 1369
Query: 1336 -----PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
PKVLGD+ ES +GAI +DS NL VW I+ S + I +FS N+ PIR L E
Sbjct: 1370 EHVDVPKVLGDIFESVIGAIYMDSNKNLTVVWNIVYSIMHKEIDEFSKNIPKQPIRVLYE 1429
>gi|170591572|ref|XP_001900544.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158592156|gb|EDP30758.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 1856
Score = 206 bits (525), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 223/460 (48%), Gaps = 86/460 (18%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
P+G VS LL+ALT + +LERLE +GD+FLKYAV +LF + EG+L+
Sbjct: 1332 PDG--VSPCTLLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFA 1389
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDP-------CQFFALGRRCPR-ICSKETERTI 1125
RS V+N NL +L ++NL I FDP C + P + ++E ++ I
Sbjct: 1390 RSKEVSNCNLYRLGRKHNLPSLIIGSKFDPNDGWLPPCYAPTSDFKAPNTLDAEERDKFI 1449
Query: 1126 HSQYDGRAPD--------------DLNAEVR-CSKG-----------HHW---------- 1149
+ +G+A + D N +VR + G W
Sbjct: 1450 ENVLEGKAVEGQETVKIPTGWDEADRNGQVRRIANGIETIEFPKNMTTSWDGEEITPLPY 1509
Query: 1150 -------LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI---- 1198
L K+IAD VE+L+GA + + G A F+KW+G++V Z Q+ +
Sbjct: 1510 NLLTQQSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTZPVQMEPPLLRFID 1569
Query: 1199 -------SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLE 1249
S + L + LE +G++F R LLQAF H S+ NR+ GCYQRLE
Sbjct: 1570 TTDQPDKSLRKLNDLWIQFQFSKLEDCIGYRFHDRAYLLQAFTHASYYKNRITGCYQRLE 1629
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDAVLDY+IT +L+ PG LTDLRS LVNN FA++AV +F+K I L
Sbjct: 1630 FLGDAVLDYVITRFLFQHSAHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRL 1689
Query: 1310 SETINNYV----------------DYMITP--SSTREVKEGPRCPKVLGDLVESSLGAIL 1351
I +V YM+T +E PK +GD+ ES GAI
Sbjct: 1690 HHMIEKFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIY 1749
Query: 1352 LDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLEL 1389
LDSG +LNTVW++ + + + SN +PIRELLE+
Sbjct: 1750 LDSGRSLNTVWRVFYNLMKETINECCSNPPRSPIRELLEM 1789
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 245/549 (44%), Gaps = 78/549 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA + NIIV LGTG GKT IAVLLI E + P K+ FL V+
Sbjct: 16 RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTTKLVTPWKNGGKRAFFLVDKVS 75
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV+QQA IE V G + ++ I +EV V+ QI L L H F
Sbjct: 76 LVEQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDTFIALHEVTVLTAQIFLDLLDHGF 135
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
M A++IFDECHH + S HPY IM + + + PRI G+TAS + K +
Sbjct: 136 FNMSNAAVIIFDECHHV-LGSKHPYRLIMHRYGQLTEVDRPRILGLTASLISSK--IPPS 192
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
NL + LE ++ + S+E A DL S +S R +Y + +D + C+ + +
Sbjct: 193 NLEHLLEKLERIMHS---SIETASDLVS-ISKYGARPKEYVIMCHD----FFCCTCETS- 243
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSM---------------KFCLENLGVCG 339
++ IS L +SLR + H K LE LG
Sbjct: 244 ---KKVISTL-------ESLRTFCLKCTEFHPEFDVDPRKPVLEAVSRTKSVLEQLGPWC 293
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR-RDGIASDLSCIE 398
A + + + E I F A I R D +++ C
Sbjct: 294 AWKLCQLFQRQLKKQSGQGFLPEKQII------FLQMAYTTMRFIKRLLDVKVANIRCFS 347
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKC--------IVFVNRIVTARALSYILQNL-KF 449
+K P +L RL IL F K I+FV + R ++Y+L L +
Sbjct: 348 DVK-PILPDRLARLFEILKFFSPSNMEKVDPDFTFCGIIFVEQ----RYVAYVLNTLIRA 402
Query: 450 LASWR--------CHFLVGVN-AGLKSMSRNAMKS----ILEKFRSGELNLLVATKVGEE 496
++ W F++G N A + + A+ +L KFR LNLL+AT V EE
Sbjct: 403 ISRWDNDKFGYLVSDFVIGYNSANIGTEETMALHKRQELVLRKFRQRHLNLLIATSVLEE 462
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEED 555
G+D++ C +VIRFD P +++QS+GRAR + Y LV+ ++ + +K+F + E
Sbjct: 463 GVDVRQCNVVIRFDRPTDYRAYVQSKGRARKDGASYFLLVEERDREQCSCDLKDFLQIE- 521
Query: 556 RMNREIMDR 564
R+ +M R
Sbjct: 522 RIGDRVMYR 530
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 164/438 (37%), Gaps = 87/438 (19%)
Query: 628 IILPANAPIHQIVG--TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM 685
++LP N+PI + + P S + A+ L+A LHK LNDYLLP +D M
Sbjct: 533 LLLPINSPIKETIKLKKPLESKKLAQMAVALEACRRLHKRKELNDYLLP----VGKDTIM 588
Query: 686 LFSSDSDSYE---------GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI--- 733
L + D D E G R +L++ + L + ++ + M I
Sbjct: 589 LTALDEDPDEFIPNMSYKVGSARRRQLYDKRMAKALHNAIPRAGEECYIYVMEMDLIKAV 648
Query: 734 ---PDPADRIYRE-------FGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQ 782
+P +R FG +P L L +GR LV S ++
Sbjct: 649 TGAANPKNRRIINPLDTEFCFGFLSNKKIPKVP---SFPLFLRQGRMQANIFLVKSRLLV 705
Query: 783 AQQFQEMF------------------LKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLL 824
Q E+ L + D++ N VPL ++ E+S F L
Sbjct: 706 DTQMLELLKAFHHYLFDNVLRLVKGGLVFVPDKAPVNVLIVPLRRERNSETSEVDFKL-- 763
Query: 825 PVIFHKNSVDWKIIRRCLSS----PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
D+ +R +SS P T + K + + W + D +
Sbjct: 764 ---------DYAYVRNVVSSIDELPRIPTEAERLAFKFDAAKFQDAIVMPWYRDRDHPS- 813
Query: 881 LVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLF 940
FY V I+ K S + D + D+ I Y I + +QPLL
Sbjct: 814 ---------FYYVAEIIDAKPS-SKFPDDKFVTFNDYFIQKYNIIIYDQQQPLLDVDYTS 863
Query: 941 RLRNLLHNRKLEDSESHELEEYFDD---------LPPELCQLKIIGFSKDIGSSLSLLPS 991
NLL R S+S EE + L PEL + I S + + ++ LP+
Sbjct: 864 SRLNLLMPRHWSRSKSRVTEEKSSESGGISQGQILVPELVDVHPIAAS--LWNVIAALPT 921
Query: 992 IMHRLENLLVAIELKHLL 1009
+++R+ +LL+A EL+ L+
Sbjct: 922 LLYRINSLLLADELRELV 939
>gi|402595090|gb|EJW89016.1| type III restriction enzyme [Wuchereria bancrofti]
Length = 1410
Score = 206 bits (525), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 222/460 (48%), Gaps = 86/460 (18%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
P+G VS LL+ALT + SLERLE +GD+FLKYAV +LF + EG+L+
Sbjct: 886 PDG--VSPCTLLQALTLSNASDGISLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFA 943
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDP-------CQFFALGRRCPR-ICSKETERTI 1125
RS V+N NL +L ++NL I FDP C + P + ++E ++ I
Sbjct: 944 RSKEVSNCNLYRLGRKHNLPSLIIGSKFDPNDGWLPPCYAPTSDFKAPNTLDAEERDKFI 1003
Query: 1126 HSQYDGRAPD--------------DLNAEVR-CSKG-----------HHW---------- 1149
+ +G+A + D N +VR + G W
Sbjct: 1004 ENVLEGKAVEGQETVKIPTGWDEADRNGQVRRIANGIETIEFPKNMTTSWDGEEITPLPY 1063
Query: 1150 -------LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI---- 1198
L K+IAD VE+L+GA + + G A F+KW+G++V E Q+ +
Sbjct: 1064 NLLTQQSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTEPVQMEQPLLRFID 1123
Query: 1199 -------SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLE 1249
S + L + LE +G++F R LLQAF H S+ NR+ GCYQRLE
Sbjct: 1124 TTDQPDKSLRKLNDLWIQFQFSKLEDCIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLE 1183
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDAVLDY+IT +L+ PG LTDLRS LVNN FA++AV +F+K I L
Sbjct: 1184 FLGDAVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRL 1243
Query: 1310 SETINNYV----------------DYMITP--SSTREVKEGPRCPKVLGDLVESSLGAIL 1351
I +V YM+T +E PK +GD+ ES GAI
Sbjct: 1244 HHMIEKFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIY 1303
Query: 1352 LDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLEL 1389
LDSG +LN VW++ + + + SN +PIRELLE+
Sbjct: 1304 LDSGRSLNIVWRVFYNLMKETIDECCSNPPRSPIRELLEM 1343
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 193/495 (38%), Gaps = 91/495 (18%)
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF-DDLGGTICH---IILPAN 633
Y V+S+GA ++ +SL++RYC+KLP D F P+ + +G + + ++LP N
Sbjct: 31 YTVESTGAQVTLTTAISLVNRYCAKLPSDIFTRLVPQNTIVPETIGDRVMYRAELLLPIN 90
Query: 634 APIHQIV--GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
+PI + + P S + A+ L+A LHK LNDYLLP +D ML + D
Sbjct: 91 SPIKETIKLKKPLESKKLAQMAVALEACRRLHKRKELNDYLLP----VGKDTIMLTALDE 146
Query: 692 DSYE---------GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI------PDP 736
D E G R +L++ + L + + + M I +P
Sbjct: 147 DPDEFIPNMSYKVGSARRRQLYDKRMAKALHNAIPHAGEECYIYVMEMDLIKAVSGAANP 206
Query: 737 ADRIYRE-------FGLFVKSLLPGEAEHLKV---DLHLARGR-SVMTKLVPSGIMQAQQ 785
+R FG + KV L L +GR LV S ++ Q
Sbjct: 207 KNRRIINPLDTEFCFGFLSNKKYRRYPKRQKVPSFPLFLRQGRMQANIFLVKSRLLVDTQ 266
Query: 786 FQEMF------------------LKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI 827
E+ L + D++ N VPL ++ E+ F L
Sbjct: 267 MLELLKAFHHYLFDNVLRLVKGGLVFVPDKAPVNVLIVPLRRERNSETGEVDFKL----- 321
Query: 828 FHKNSVDWKIIRRCLSS----PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVY 883
D+ +R +SS P T + K + + W + D
Sbjct: 322 ------DYAYVRNVVSSIDELPRIPTEAERLAFKFDAAKFQDAIVMPWYRDRD------- 368
Query: 884 ATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
H ++Y+ + + S + D + D+ I Y I + +QPLL
Sbjct: 369 --HPSFYYVAE--IIDAKPSSKFPDDKFITFNDYFIQKYNIIIYDQEQPLLDVDYTSSRL 424
Query: 944 NLLHNRKLEDSESHELEEYFDD---------LPPELCQLKIIGFSKDIGSSLSLLPSIMH 994
NLL R S+S EE + L PEL + I S + + ++ LP++++
Sbjct: 425 NLLMPRHWSRSKSRVTEERSSESGGISQGQILVPELVDVHPIAAS--LWNVIAALPTLLY 482
Query: 995 RLENLLVAIELKHLL 1009
R+ +LL+A EL+ L+
Sbjct: 483 RINSLLLADELRELV 497
>gi|312069719|ref|XP_003137813.1| hypothetical protein LOAG_02227 [Loa loa]
gi|307767024|gb|EFO26258.1| hypothetical protein LOAG_02227 [Loa loa]
Length = 1928
Score = 206 bits (524), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 240/528 (45%), Gaps = 95/528 (17%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRR 1073
P+G VS LL+ALT + +LERLE +GD+FLKYAV +LF + EG+L+
Sbjct: 1404 PDG--VSPCTLLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFA 1461
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFDP-------CQFFALGRRCPRICSKETE---- 1122
RS V+N NL +L ++NL I FDP C + P E
Sbjct: 1462 RSKEVSNCNLYRLGRKHNLPSLIIGSKFDPNDGWLPPCYAPTSDFKAPNTLDAEERDKFI 1521
Query: 1123 ------RTIHSQYDGRAPD-----DLNAEVR-CSKG-----------HHW---------- 1149
+T+ Q R P D N++VR + G W
Sbjct: 1522 ENVLEGKTVERQEPVRVPTGWDEADRNSQVRRIADGIETIEFPKNMITSWDGEEITPLPY 1581
Query: 1150 -------LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI---- 1198
L K+IAD VE+L+GA + + G A F+KW+G++V E QV +
Sbjct: 1582 NLLTQQSLGDKSIADAVESLIGAHLLELGPTATLRFMKWLGLKVLTEPVQVEPPLLRFID 1641
Query: 1199 -------SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLE 1249
S + L + LE +G++F R LLQAF H S+ NR+ GCYQRLE
Sbjct: 1642 TTEQPDKSLRKLNDLWVQFQFSKLEDFIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLE 1701
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDAVLDY+IT +L+ PG LTDLRS LVNN FA++A+ +F+K I L
Sbjct: 1702 FLGDAVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAIKHNFHKHFIAMCPRL 1761
Query: 1310 SETINNYV----------------DYMITP--SSTREVKEGPRCPKVLGDLVESSLGAIL 1351
I +V YM+T +E PK +GD+ ES GAI
Sbjct: 1762 HHMIEKFVCLCTEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIY 1821
Query: 1352 LDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK-- 1407
LDSG +L+ VW++ + + + SN +PIRELLE+ + + + GK
Sbjct: 1822 LDSGRSLDIVWRVFYNLMKETIDECCSNPPRSPIRELLEMEPERARFSKLERILETGKVR 1881
Query: 1408 ----FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
+ + TG + I+ C + K A+R K +AAG
Sbjct: 1882 VTVDIQGKCRFTGMGRSYRIAKCT---AAKRALRYLRSLKKEKERAAG 1926
Score = 205 bits (522), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 207/699 (29%), Positives = 312/699 (44%), Gaps = 76/699 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA + NIIV LGTG GKT IAVLLI E + P KS FL V+
Sbjct: 16 RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTSKLVIPWKSGGKRAFFLVDKVS 75
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQA IE V G + ++ I +EV V+ QI L L H F
Sbjct: 76 LVGQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDAFIALHEVTVLTAQIFLDLLDHGF 135
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
M A++IFDECHH + S HPY IM + + + PRI G+TAS + K
Sbjct: 136 FNMSNAAVIIFDECHHV-LGSKHPYRLIMHRYGQLTEVDRPRILGLTASLISSKIP---- 190
Query: 235 NLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
P S+ L L+ +YS +E A DL S +S + +Y + +D S+++
Sbjct: 191 --PNSLEQLLEKLERIMYSSIETASDLLS-ISKYGAKPKEYVIMCHDFFCCSCEISKKVV 247
Query: 294 EIKREQYISALS-RKLH---DHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
+ L + H D + + +NR K LE LG A +
Sbjct: 248 DTLENLRTFCLKCTEFHPEFDVDPRKPVLEAVNR----TKSVLEQLGPWCAWKVCQLFQR 303
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR-DGIASDLSCIEVLKEPFFSKK 408
+ + E I F A R D + + C +K P +
Sbjct: 304 QLKKHSGQGFLPEKQVI------FLQMAYTTMRFTKRLLDAKVASVRCFNDMK-PILPDR 356
Query: 409 LLRLIGILSTFRLQQHMKC--------IVFVNRIVTARALSYILQNL-KFLASWRCH--- 456
L RL IL + K IVFV + R ++Y+L L + ++ W
Sbjct: 357 LSRLFEILKFYSPSNMEKVDPDFTFCGIVFVEQ----RYVAYVLNTLIRAISRWDSDKFG 412
Query: 457 -----FLVGVN-AGLKSMSRNAMKS----ILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
F++G N A + + A+ +L KFR LNLL+AT V EEG+D++ C +V
Sbjct: 413 YLVSDFIIGYNSANISAEETMALHKRQELVLRKFRQRHLNLLIATSVLEEGVDVRQCNVV 472
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDRMNREIMD-- 563
IRFD P +++QS+GRAR + Y LV+ ++ + +K+F + E + + +
Sbjct: 473 IRFDRPTDYRAYVQSKGRARKDGASYFLLVEERDREQCSRDLKDFLQIERMLLKRYQNVH 532
Query: 564 ----RTSSDAFTCSEERI--YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
T S + ++ I Y V+S+GA ++ + L++RYC+KLP D F P+
Sbjct: 533 NPPEPTISPSIEAMDDIIAPYTVESTGAQVTLTSAIGLVNRYCAKLPSDIFTRLVPQNTI 592
Query: 618 FDDLGGT----ICHIILPANAPIHQIV--GTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
+ G ++LP N+PI + + P S + A+ L+A LHK LNDY
Sbjct: 593 VPETVGDHVMYRAELLLPINSPIKETIKLKKPLGSKKLAQMAVALEACRRLHKRKELNDY 652
Query: 672 LLPQEDN-----ATEDEPMLFSSDSDSYEGEGSRGELHE 705
LLP + A +++P F + + G R +L++
Sbjct: 653 LLPVGKDTIMLTALDEDPDEFIPNMNYKVGSARRRQLYD 691
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 890 FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR 949
FY V I+ K S + D ++ D+ I YGI + +QPLL NLL R
Sbjct: 888 FYYVAEIIDAKPS-SKFPDDKFATFNDYFIQKYGIVIYDQEQPLLDVDYTSSRLNLLMPR 946
Query: 950 KLEDSESHELEEYFDD---------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
S + EE + L PEL + I S + + ++ LP++++R+ +LL
Sbjct: 947 HWSRSRNRTTEERGSESGGMSQGQILVPELVDVHPIAAS--LWNVIAALPTLLYRINSLL 1004
Query: 1001 VAIELKHLL 1009
+A EL+ L+
Sbjct: 1005 LADELRELI 1013
>gi|169868762|ref|XP_001840952.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
gi|116498110|gb|EAU81005.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
Length = 2074
Score = 206 bits (523), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 206/733 (28%), Positives = 318/733 (43%), Gaps = 141/733 (19%)
Query: 53 KDPKQIA-RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFL 111
+D K IA R YQ E+ +++ NII+ L TG GKTHIAVL I H + + + IC FL
Sbjct: 28 QDTKIIATRAYQQEMLDESLRRNIIIALDTGSGKTHIAVLRI---KHELERENRKICWFL 84
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYC 169
APTVAL QQQ VI+ I V G + + K+ W+ ++ + V+V PQ+ L
Sbjct: 85 APTVALCQQQQSVIKTYIPGPVGLISGAHQPDQWKNAALWKSVLETHRVIVSTPQVFLDA 144
Query: 170 LYHRFIKMEL-IALLIFDECHHAQVKSNHPYAKIMKDFY----------KPDIMKVPRIF 218
L H +I M L I LL+FDE HHA K HPY IMKDFY D P +
Sbjct: 145 LRHGYINMGLQIGLLVFDEAHHAADK--HPYNLIMKDFYFKLPARSPMHDADFPCRPMVL 202
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPV 277
G+TASP+ G G ++ K+ +E LDA + + + ++L V P ++++ P
Sbjct: 203 GLTASPIFGSG-----DVNKAFRLIEAHLDAMICTPRYNRKELAQHVHRP---IFKHAPY 254
Query: 278 INDTSSSYVTCSEQLA------EIKREQYISALSRKLH------------DHQSLRNTTK 319
++ + S+ T L+ +I+ + + +L +L D + + TK
Sbjct: 255 MSCPTQSFSTNLATLSSVLEGLDIQNDPNVLSLRSQLSKTPPDSPEWRRLDQRLSKTITK 314
Query: 320 QLNRLHDSM-KFCLENLGVC---GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFAS 375
Q + H + F +C GA A + + + + ++ N ++ + + S
Sbjct: 315 QDSFTHKGLADFHRAASDICFSIGAWAADWYVWTVVQKAKH-----AANPYNNIMSTWRS 369
Query: 376 QASEVFAAICR----------RDGIASDLS-CIEVLKEPFFSKKLLRLIGILSTFRLQQH 424
I D I S+ + + VL E +K + G+ +F
Sbjct: 370 SEKAYLLQILTSLVLSPPSYYEDDILSECTDKVRVLVECLLEEK-EEVEGLNESF----- 423
Query: 425 MKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG-------------LKSMSRN 471
IVFV R AL+ +L++ F + F VGV G + +++
Sbjct: 424 -SGIVFVQRRDAVLALAELLKHHPFT---KDSFTVGVLLGTSDSAHRHSLMDVTRHITKQ 479
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
+ S L FR G NL++AT V EEGLDI C VIR+D P +AS+IQSRGRAR +S
Sbjct: 480 SQDSTLSSFRLGIHNLILATSVAEEGLDIPACGSVIRWDPPPNMASWIQSRGRARRKRST 539
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS----SDAFTCSE----------ERI 577
+ + D R + + + E+RM E+ R S DA E + +
Sbjct: 540 FTLMYDVEEDRAQANVAKWREVEERMV-EMYSRNSGGREGDAGVDVEDWEGEEPDDFDAV 598
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD------------------ 619
V+S+GA ++ VS L +C+ + +P Y D
Sbjct: 599 LSVESTGAYLTPHSAVSHLAHFCAVISRSGSNENRP-IYDIDPPDYVPGLHLTAPSAAGS 657
Query: 620 ---DLGGTICHIILPANAPIHQIVGTPQS---------------SMEAAKKDACLKAIED 661
++ H P P V P+S + AA + A A
Sbjct: 658 QSTGFASSMAHAHQPYAGPWTSTVTLPRSLPLPTRSFTTAKPYATKLAAHRHAAFLAYSY 717
Query: 662 LHKLGALNDYLLP 674
LH++G LN++LLP
Sbjct: 718 LHEVGLLNEHLLP 730
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 201/512 (39%), Gaps = 115/512 (22%)
Query: 1018 EVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNA 1077
++ ++L ALT ER + +RLE LGD LK+ G +F + EG LT+R+ +A
Sbjct: 1487 QIPLDVLTVALTAPVAGERHNYQRLETLGDTVLKFLAGIQIFAEYPMWHEGYLTKRKDHA 1546
Query: 1078 VNNSNLLKLAARNNLQVYI---------------------RDQPFDPCQFFALGRR---- 1112
V N L K + + +I R +P D + +R
Sbjct: 1547 VANVRLAKECVKRGVVRWIIRDRLLGKKWKPRYITKADPSRGEPMDVDPIPDVVKRDKPK 1606
Query: 1113 ---CPRICSKET---------ERTIHSQYDGRAPDD---LNAEVRCS----------KGH 1147
I +KET ++ S + + DD L AE + + +
Sbjct: 1607 DTGAKEIGAKETSVSDAEMKVDKGEESNAEAKIDDDGKGLKAETKVQGEKKKKKKNKQAN 1666
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA--SQVTNIC--ISSKSF 1203
L K +ADV+E+L+GA GF K+ + +++ ++V I + +
Sbjct: 1667 KQLSTKVLADVIESLIGAAYISGGFPLGYECAKFFDLGLKWAPLPTRVDQILSRVQPEDD 1726
Query: 1204 LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLIT 1261
+P+ L A +E +LG+ F + LL++A H S+ Y+R+EF+GD++LD ++T
Sbjct: 1727 IPIPPQL--ADVEHMLGYTFKRKILLIEALTHASYREHINTISYERMEFIGDSILDMVVT 1784
Query: 1262 SYLYSVYPKLKP---------------------GQLTDLRSMLVNNQAFANVAVDQ---- 1296
LY + P G +L ++ A +N D
Sbjct: 1785 DMLYRAPREYSPGHIHLRRSAVVNGHFLAYICLGMWRELEGVMPQPSASSNAGKDDWNPY 1844
Query: 1297 ---------------SFYKFLIFDSNVLSETINNYVD-YMITPSSTREVKEGP------- 1333
+ L+ S + + + N V+ Y + + E
Sbjct: 1845 LNPPTFEEGTTAHRIHLSQCLLHSSQQVLDDLRNTVERYELRREEIADALEHGSIFPWSS 1904
Query: 1334 ----RCPKVLGDLVESSLGAILLDSGFNLNTVWKI-----MLSFLDPILKFSNLQLNPIR 1384
+ PK L D+VES++GA +DSGF++ V I +L L+ I++ L+P+
Sbjct: 1905 LTRLQAPKFLSDIVESTIGAAFIDSGFSIPVVTSIIRRIGILPVLERIIRDDVDVLHPVS 1964
Query: 1385 ELLELCNSYDLDLQFPSLKKGGKFLAEAKVTG 1416
L + +++ KK G V G
Sbjct: 1965 RLSMWAAQNERKVEYKYEKKRGDVACTVVVDG 1996
>gi|169768544|ref|XP_001818742.1| ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40]
gi|121804870|sp|Q2UNX5.1|DCL2_ASPOR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|83766600|dbj|BAE56740.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868391|gb|EIT77606.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1377
Score = 205 bits (522), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 307/669 (45%), Gaps = 84/669 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK--PQKSICIFLAPTVAL 117
R+YQ E+ + +++ENIIV + TG GKT IA+L I AH + P+K + FL PTVAL
Sbjct: 17 RQYQYEMFEASLKENIIVAMDTGTGKTQIALLRI---AHQLEGGGPRK-LTWFLTPTVAL 72
Query: 118 VQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
QQ +VI + + T G K R KS W++ + +V+V +L L H F
Sbjct: 73 CLQQYEVIRSHLPAVRACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALTHGF 132
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKG 229
+++ + LLIFDE HH + HP IM DFY P + K VP I G+TASPVV
Sbjct: 133 VRISQLGLLIFDEAHHCMRR--HPANMIMLDFYHPTLRKHGRDSVPCILGLTASPVVRSK 190
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP-----VVRVYQYGP---VINDT 281
+ L +++S+ K V E L ++ P + + GP +
Sbjct: 191 SQEMKTLESNLDSI-----CKTPQVHKQE-LTTYAHRPELLPIICKAIDEGPGGRALQAL 244
Query: 282 SSSYVTCSEQLAEIKREQYISALS-----RKLHDHQSLRNTTKQLNRLHDSMKFCLENLG 336
++ T Q S L+ + L ++L N +Q+ R D + LG
Sbjct: 245 EHAWDTADIDGDPDAIPQNGSLLNGSGEYKALMVRKTLCN--EQIKRFVDRSRHIFAELG 302
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
A Y + + E +R + D SL + + S L
Sbjct: 303 EWAA---DYYICTSVEQLRTTIR-------DQSLTMDWEDEERAYLS-----NFLSKLPV 347
Query: 397 IEV---LKEP---FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKF 449
EV L +P S KL LI L F ++FV + VT L+ +L + +
Sbjct: 348 AEVQANLADPNNFTMSPKLAALINFLDKFD-DPEFSGLIFVKQRVTVSVLARLLSLHPQT 406
Query: 450 LASWRCHFLVGVNAG-----LKSMSRNAMK--SILEKFRSGELNLLVATKVGEEGLDIQT 502
+RC VG++ G + NA K ++ FRSG NL+V T V EEG+D+
Sbjct: 407 RDRFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVTTSVLEEGIDVTA 466
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNFSKE 553
C +V+ FD P + SFIQ RGRAR +S YA + + ++ E +++ + E
Sbjct: 467 CRVVVCFDKPANLKSFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQILEQAMVEAYQDE 526
Query: 554 EDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
E R + + + +A + + V+++GA I+ V+ L+ +C+ LP + + + +P
Sbjct: 527 E----RRLREAEAQEAVDENVPEMITVEATGAVITPDSVVTHLYHFCAVLPEERYVDNRP 582
Query: 614 KFYYFDDLGGTI-CHIILPA--NAPIHQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALN 669
+F + D G I +ILP+ + + +I G S AA K+ +A L++ G LN
Sbjct: 583 EFSFEKDRQGLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVKETAFQAYRALYEFGLLN 642
Query: 670 DYLLPQEDN 678
D+LLP N
Sbjct: 643 DHLLPLTKN 651
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 192/472 (40%), Gaps = 78/472 (16%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEY------FDDLPPELCQLKIIGFSKDIGSSLS 987
+ +P+ R RN LH L++ ++ + E + E C + + S I
Sbjct: 840 IECRPIPRRRNFLHPPALDNGQADAIVESEHGSAKVHMVAAESCTVDKLPVSTAIFGLF- 898
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+P I+ RLE+ L+A L + + + ++ A+ Q + +R E LGD
Sbjct: 899 -IPHIVDRLESTLIA---NRLCATILCDVGFADIQHVITAIMAPSAQGVTNYQRYEFLGD 954
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LKY V LF + EG LT R+ V N L + A L +I + P ++
Sbjct: 955 SILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIITKALTPRRWI 1014
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
A P I ++ + Q + K +ADV+EAL+GA
Sbjct: 1015 A-----PLISTRVGAAPVKRQ---------------------MSAKVLADVIEALIGAAY 1048
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
D G A +V + + ++ ++ +D L+ LG+ F +
Sbjct: 1049 LDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTEHGRTARHIID-GDLQRHLGYTFKNED 1107
Query: 1228 LLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LL++A HPS ++ YQRLEFLGDA+LD +I ++ K+ PG +T ++ +VN
Sbjct: 1108 LLIEALTHPSCQHDQTTQSYQRLEFLGDAILDMVIVPIIFQYSNKISPGDMTLIKHAVVN 1167
Query: 1286 NQAFA----NVAVDQS----------------------FYKFLIFDSNVLSETINNYVD- 1318
+++Q ++F+ F+S L + + +D
Sbjct: 1168 ANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLDLQTSRDAALDR 1227
Query: 1319 -YMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLN 1359
+ + GP P K D+VES LGAI +DSG +L+
Sbjct: 1228 HRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSGGDLS 1279
>gi|168046558|ref|XP_001775740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672892|gb|EDQ59423.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 792
Score = 205 bits (522), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 206/742 (27%), Positives = 330/742 (44%), Gaps = 88/742 (11%)
Query: 716 WTKSQYPVR-LNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTK 774
WT Y +R LNF + DP + EF L LL E + V L+L +V +K
Sbjct: 52 WTCFTYTIRFLNF---KAGTDPIQQSASEFLLLSPQLLDEEVSSISVHLNLPAFAAVDSK 108
Query: 775 LVPSGIMQA--------QQFQEMFLKVILDRSEFNSEFVPLGKDDY----CESSSSTFYL 822
L G++ ++F + + + + GK +Y C+ +
Sbjct: 109 LNYCGVLNVSPEKVETVKKFNIWLFHLAMGKCFALPKVSGEGKKNYYVLPCKPITGD--- 165
Query: 823 LLPVIFHKNSVDWKIIRRCLSS--------PVFGTPGGSVDRKSLPSH-----GPLQLHN 869
V + VDW ++ ++S P FG ++D ++ S+ G L++ N
Sbjct: 166 --TVPSPEELVDWHVVEIAITSSLLYRRKVPFFGG-YATLDCQNTQSNEALDGGGLRMRN 222
Query: 870 GWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIH---- 925
G E D+E+++V + V+ I+ + +G S S + + S Y H
Sbjct: 223 GIFQEHDLEDAVVTCANNGLPCFVSGILHDLSGSSFCSQSAGRKQISY--SDYYFHECKY 280
Query: 926 -LKHPKQPLLRAKPLFRLRNLLH-NRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIG 983
L++P QPLL+ L R N + + + +S + E + LPPE+C L + G +
Sbjct: 281 KLEYPDQPLLKGYRLVRAGNYVRRTSAVSNGDSVKPWETME-LPPEVCILHV-GLKGKLC 338
Query: 984 SSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLE 1043
LPSI+H LE LVA EL++ + G+ +S + +ALT+ C+ S E LE
Sbjct: 339 RGGMRLPSILHSLEMSLVAAELRNNI------GSPLSCFKVQEALTSGACEGNHSYETLE 392
Query: 1044 ILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP 1103
+LGD+ L + G H+++ + L R + V+N NL K L YI
Sbjct: 393 LLGDSVLNFIGGVHMYIDFPSCTSELLHSYRHDLVSNRNLYKCGLACGLPGYI------- 445
Query: 1104 CQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALV 1163
FA E T G A +DL + S + KT+ADVVEAL+
Sbjct: 446 ---FA-----------ELLNTKTWVPPGPALEDLPQK---SPDGQVIGLKTLADVVEALI 488
Query: 1164 GAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASL---DMATLEILLG 1220
G +A + W+ + + F I + + + D+ TLE +G
Sbjct: 489 GVTFLHGDLNSAVKTMVWLQVPIPFPEKIPEVIIADIQELMEARNTFKDHDIVTLEKKIG 548
Query: 1221 HQFLHRGLLLQAFVHP---SFNRLGGC-----YQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
+QF + LLL AF + +F + G +QRLEFLGD+VLD+LI + +Y
Sbjct: 549 YQFKCKSLLLSAFDYGDEVTFTQSGVPRGSFQFQRLEFLGDSVLDFLIMRHFVQLYSAFN 608
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEG 1332
P QL DLR VN++ FA A+ F+ +L S +L + I Y + +
Sbjct: 609 PEQLNDLRQATVNSENFACTAIRHGFHHYLKRMSPILRDEIELYAASVHREGGSPFGIPS 668
Query: 1333 PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNS 1392
PK +GDL+++ G+ILLDS F+ + VWK++ L P+ + +P R L LC+
Sbjct: 669 RASPKAIGDLMQTLAGSILLDSNFDHDLVWKVLKPLLSPLATPKTVMRHPRRLLEALCHK 728
Query: 1393 YDLDLQFPSLKKGGKFLAEAKV 1414
DL L+ +++ G EA+V
Sbjct: 729 QDLKLELQTIQLEGA--VEARV 748
>gi|158706440|sp|P0C5H7.1|DCL2_EMENI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1429
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 184/648 (28%), Positives = 290/648 (44%), Gaps = 79/648 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + +++ NIIV +GTG GKT IA+L I H + + FLAPTV L
Sbjct: 14 ARSYQLEMFEASLKGNIIVVMGTGSGKTQIALLRII---HELENSDGKLIWFLAPTVPLC 70
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ +VI + I K RT G K W+ ++ +V+V P +L + H F+
Sbjct: 71 LQQHRVISQHIPAVKSRTLLGSDKVELWTEQAVWDAVLEGLQVIVSTPAVLHDAMTHGFV 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGA 230
++ + LLIFDE HH K HP IM++FY P + + VPRI G+TAS G
Sbjct: 131 RISRLGLLIFDEAHHCIRK--HPTNMIMRNFYHPALQEYGPGAVPRILGLTAS--AGSSR 186
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ ++NS+ A ++L + P +R Y P++ + +S + +
Sbjct: 187 EGLQTIEMNLNSVCTTPQAH------RQELLEYTHMPELRRVLYTPLMKENASLWEGSTL 240
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
Q + Y S Q+ + LG+ A + +I S
Sbjct: 241 QKLLERDNTYCSG----------------QMKTFVCKAVHIFQELGIWAAEY--FIRASV 282
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS-DLSCIEVLKEPFFSKKL 409
+E + + + ++ + D E I + + D+ + P S K
Sbjct: 283 EELLSHAYVHSKIDLDYDE--------REYLVNILSKSPVPDIDVHSTDPKDFP-VSPKF 333
Query: 410 LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL-KSM 468
LI L + + ++FV + +SY+L S R F G G+ S
Sbjct: 334 EALISFLMSTE-DINFSGLIFVEQRAAVTVMSYLLST---HPSTRDRFRTGSFIGMSNST 389
Query: 469 SRNAM----------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+R M L+ FR G NL+VAT V +EG+D+ C +VI +++P+ SF
Sbjct: 390 NRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESF 449
Query: 519 IQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNFSK-------EEDRMNREIMDRTSSDAF 570
IQ RGRAR S Y+ ++ + + LD + F K E+ R E+ S D
Sbjct: 450 IQRRGRARRQNSTYSMMLSTEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGSLDED 509
Query: 571 TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHII 629
C+ + V S+GA ++A Y + L +C LP + KP+F + + GG + +I
Sbjct: 510 VCTR---FCVRSTGAILTAEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGGLLRAKVI 566
Query: 630 LPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALNDYLLP 674
LP+ N + + G E AAKK+A A + L++ G +ND LLP
Sbjct: 567 LPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLP 614
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 172/433 (39%), Gaps = 101/433 (23%)
Query: 988 LLPSIMHRLENLLVAIEL--KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+P I+ RLE LVA L L F + V + A+T Q +R E
Sbjct: 860 FIPVILDRLEAALVATRLCETVLRDIQFQDLRHV-----ITAITMPLAQAPTDYQRYEFF 914
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK+ V LF + EG LT V N+ L + A L YI F P +
Sbjct: 915 GDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRK 974
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ A P I K + S + K +ADVVEAL+GA
Sbjct: 975 WSA-----PLISEK---------------------LYASASTRSMSAKVLADVVEALIGA 1008
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS------LDMATLEILL 1219
D G A + + ++E ++ + +P+S + LE +
Sbjct: 1009 AYIDGGLHKAQSCIVRFLPEIELPETK-----LPRPESMPMSKDHKKPHLIQQENLENHI 1063
Query: 1220 GHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LL++A HPS ++ YQRLEFLGDAVLD LI + + + + + G++T
Sbjct: 1064 GYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMT 1123
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLI-------FDSNVLSET-----------INNYVDY 1319
++ +VN A + + +K+ + D+ +ET + +Y+ Y
Sbjct: 1124 KIKHAIVNGHLLAFLCMQ---FKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRY 1180
Query: 1320 --------MITP---SSTREVKEGPRCPKVL-----------------------GDLVES 1345
+ P SS + CP +L D+VES
Sbjct: 1181 SPSRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVES 1240
Query: 1346 SLGAILLDSGFNL 1358
+GAI +DSG +L
Sbjct: 1241 IIGAIFVDSGGDL 1253
>gi|213408108|ref|XP_002174825.1| dicer [Schizosaccharomyces japonicus yFS275]
gi|212002872|gb|EEB08532.1| dicer [Schizosaccharomyces japonicus yFS275]
Length = 1384
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 186/638 (29%), Positives = 293/638 (45%), Gaps = 82/638 (12%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAH---LIRKPQKSICIFL 111
KQ R YQ A+++N ++ + TG GKT +A+ LI Y L K K I IFL
Sbjct: 17 KQALRNYQEVAYNIAIKQNTLLVMNTGAGKTLLAIKLIEYVLEQENSTCEKTSKRISIFL 76
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
P V LV+QQA ++ + V FCG L + ++ + +V+V+ +L CL
Sbjct: 77 VPKVPLVEQQADYVQTQLNRPVGRFCGEISNLYHDNVFAEKFMKNDVVVVTGGLLFECLS 136
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
FIK+ + LLIFDECHHA + Y +IMK FY + + +PR+FGMTASP++
Sbjct: 137 KGFIKLSDVNLLIFDECHHAS--KDDVYVRIMKYFYHEPLREHPETIMPRVFGMTASPLM 194
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
G + L K N LE++ D+K+ + D EDL + SP + QY I D S+
Sbjct: 195 GNKWA----LEKEFNKLEDIYDSKLCIITD-EDLGKELRSPKTFILQYS--IEDFST--- 244
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
K+ D T+ +RL + + G Y
Sbjct: 245 ------------------QSKVSDR--FWKLTENFDRLKQIITRVVTETVELGLWFGDY- 283
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF- 405
S +R+ L + + + + + F A+ A+ L+ + L++P
Sbjct: 284 --SWQFFLRHALKKYDARRLRGA--EVPKEEVLAFEALQEEVRKANLLTTSKQLRKPKLN 339
Query: 406 ----SKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
+ K++ L L + F + I+FV R VTA L + F R LVG
Sbjct: 340 GIDVTNKVIILYKFLRNLFATNSTARVIIFVERKVTAFLLKLFFDKIDF-EGIRVESLVG 398
Query: 461 ---VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
AG + MS K ++ +F+ G N+LVAT + EEGLDI +C +V RF L +T
Sbjct: 399 NGSNQAGDEQMSYKLQKEVIRRFKHGSANVLVATAIAEEGLDIPSCDVVFRFSLCKTAIQ 458
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS---- 573
IQS+GRAR S + L+ S +++EL FS + +EI+ + + A+ C+
Sbjct: 459 LIQSKGRARANTSIFVNLL-SEDEKEL-----FS---ELCTKEIILKETLYAYCCTRSPK 509
Query: 574 -------------EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
+ +YK++ +GA ++ VSLL+ C ++P D + P+F ++
Sbjct: 510 VEFDNNITDFFNDDNELYKIEETGALLTPFIAVSLLYGLCQRIPSDPYTLYLPEFKIQNE 569
Query: 621 LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
C + LPA I + P + + AK+ A +KA
Sbjct: 570 GEHFTCELRLPAILKIPPYITPPCRNKKKAKRYAAVKA 607
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 201/429 (46%), Gaps = 63/429 (14%)
Query: 969 ELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKAL 1028
E+ +L I+ F +I +S LLPS+++ E + + L+ L A ++S + LL+A
Sbjct: 886 EVTKLLIMPFPYEIRNSALLLPSLLYMFEQVHLVDALRVRLQA------KISTKSLLEAS 939
Query: 1029 TTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAA 1088
T+ F +R E GD FLK A +FL + V E +L R + NS L ++
Sbjct: 940 TSPGSVLPFDYDRYEFYGDTFLKLAASNSVFLSYLWVPECKLHIERKRIIRNSTLFTISK 999
Query: 1089 RNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH 1148
+++L ++ +PF F G + + + ER+
Sbjct: 1000 KHDLPGFLLSEPFVIKTFIPFGYQPTQKSKNKMERS-----------------------Q 1036
Query: 1149 WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT--NICISSKSFLPL 1206
L KT+AD+VE+ +GA + DSG A A +G+ ++ ++ N + ++ +P
Sbjct: 1037 LLANKTVADIVESSLGACLYDSGVDEALALGTRLGLNF-YKTTKWDEWNSVFNVENLVP- 1094
Query: 1207 SASLD----MATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYL 1259
SA D + LE L+G+ F H GLL AF H S+ + YQ+LEFLGDAVLD++
Sbjct: 1095 SAENDCFKHASGLESLVGYTFKHPGLLKIAFTHASYVKTTQTAVNYQQLEFLGDAVLDFI 1154
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY--- 1316
+ YL+ Y +LTD +S V N++ A V+ Y F++ D+ + Y
Sbjct: 1155 VVRYLFKKYQNKTAAELTDTKSFYVCNKSLAYVSFKLGLYDFMLQDNEDIRNAYKEYKSV 1214
Query: 1317 VDYMI----------TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
+D + TPS + P PK L D+ ES + A+ LDSGF
Sbjct: 1215 IDKLQQDTKIDSNHPTPSEKFWLLIEP--PKFLSDIFESFVCAVYLDSGFQ--------F 1264
Query: 1367 SFLDPILKF 1375
S L+P LKF
Sbjct: 1265 SALEPFLKF 1273
>gi|212723814|ref|NP_001131630.1| uncharacterized protein LOC100192986 [Zea mays]
gi|194692090|gb|ACF80129.1| unknown [Zea mays]
Length = 365
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 200/390 (51%), Gaps = 48/390 (12%)
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQY 1129
LT+ + N ++N+ L +LA NNL YIR + F+P + G Y
Sbjct: 2 LTKMKKNVISNAALCQLACSNNLVGYIRSEAFNPKTWIVPG----------------VGY 45
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
D C + L K IAD VEAL+GA++ +G +AA FLK +G+ +EF
Sbjct: 46 D-----------ICDRSLRKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGMDIEFH 94
Query: 1190 ASQVTN-ICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQ 1246
+ I I ++ F +++ +LE+LL + F LL++A H S+ G CYQ
Sbjct: 95 KMPIERVITIKAEEF------INVKSLELLLDYSFNDPSLLMEALTHGSYQIAGTTPCYQ 148
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGDAVLD++ T Y Y YP+ P LTDLRS VNN +A+ AV +K ++ S
Sbjct: 149 RLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHVLHSS 208
Query: 1307 NVLSETINNYVD----YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
+ L + + +Y+D PS E G PKVLGD+VES GAI +D+ + VW
Sbjct: 209 SALHKRMADYLDKFEQSFSGPSHGWEA--GISLPKVLGDVVESIAGAIYIDAKHDKGVVW 266
Query: 1363 KIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGG--KFLAEAKVTGKDKD 1420
+ M L+P++ LQ +P++EL E C+S L++ + G +AE + G
Sbjct: 267 RSMKRILEPLVTPDTLQNDPVKELQEFCDSKGYTLEYTVTRDNGVSSVVAEVRTEG---- 322
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKAA 1450
A T S+ +A ++A+ + LKAA
Sbjct: 323 TTYKATRTGFSKLDAKKLAASSVLRDLKAA 352
>gi|194910778|ref|XP_001982226.1| GG12488 [Drosophila erecta]
gi|190656864|gb|EDV54096.1| GG12488 [Drosophila erecta]
Length = 2249
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 250/539 (46%), Gaps = 116/539 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1722 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1841
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1842 IKNLSSVQICEMVREKAEALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1899
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----EFE-ASQVTNICISSKSFL- 1204
K+IAD VEAL+GA++ + G + A F+ W+G++V + E A+Q I S+K +
Sbjct: 1900 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLEGANQEHRIPGSTKPNVE 1959
Query: 1205 -----------PLSASLDMA---------------TLEILLGHQFLHRGLLLQAFVHPSF 1238
P S L A E LG++F R LLQA H S+
Sbjct: 1960 KMVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEVFEESLGYKFRDRSYLLQAMTHASY 2019
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 2020 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2079
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPKVLGDL 1342
F+KF S L++ I+ +V I + + E PK LGD+
Sbjct: 2080 GFHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDV 2137
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFP 1400
ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 2138 FESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EP 2188
Query: 1401 SLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 2189 ETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 2247
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 494 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 550
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 551 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 610
Query: 535 LV 536
LV
Sbjct: 611 LV 612
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 814 TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTMFQYTLRLPINSPLKH 873
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 874 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 933
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 934 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 990
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 991 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 1047
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI---FHKNSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 1048 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1099
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1100 LE------LIQANGNTMPRAVPDEERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1153
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1154 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1213
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1214 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1271
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1272 IRKQVSADLGLGRQ 1285
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ + + ++L+ V
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRGRQ-RGRVSVYLSCEVGTST 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ + + + T + + D + D Y V ++ P+ L L R +
Sbjct: 77 EPCSI------YTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLSLLEDREL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH + V Y +I + ++ IM PRI G+ A P+ G
Sbjct: 131 LLSSVELIVLEDCHDSAV-----YQRIRR-LFEEHIMPAAPVDRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLATLEQSVLCRIETASDIVTVLRYCSRPHEYIVQCAP 228
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1699 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1755
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1756 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1799
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L++LL E+ + L F + + + M + T + + + +RLE
Sbjct: 1976 LHFAPNATEELDHLLSGFEVFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2033
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2034 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2086
>gi|156032684|ref|XP_001585179.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980]
gi|154699150|gb|EDN98888.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1867
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 261/1041 (25%), Positives = 429/1041 (41%), Gaps = 185/1041 (17%)
Query: 405 FSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-RCHFLVGV- 461
S K++ L+ IL F+ + KCIVFV TAR L+ +L + + + LVG
Sbjct: 758 LSTKVVALLSILKDRFQRPTNDKCIVFVRERYTARLLASLLSTPEAGTPFLKVAPLVGTT 817
Query: 462 --NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
+AG ++ + + FR+G++N L+AT V EEGLDI C LV+RFDL TV +I
Sbjct: 818 STSAGEMHITFRSQTLTMHDFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYSTVIQYI 877
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREIM-DRTSSDA 569
QSRGRAR S Y +V+S N+ + IK K E + +R++ + + D
Sbjct: 878 QSRGRARHVNSRYYHMVESHNEEQRRTIKEVLKHEKLLKHFASALPEDRKLTGNNFNMDY 937
Query: 570 FTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH 627
F E R+Y V S A ++ +++L + LP + + + IC
Sbjct: 938 FLRKERTHRVYTVPGSNAKLTYRMSLTVLSAFVDSLPQAQDSALRVDYVVTTVNKQFICE 997
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ-EDNATEDEPML 686
+ILP API +G P ++ + AK A + LH+ G ++ +LL + +A L
Sbjct: 998 VILPEEAPIRGAIGRPATTKQVAKCSAAFETCVILHQKGYIDQFLLSTFKKSAHMMRNAL 1057
Query: 687 FSSDSDSYEGEGSRGELHEMLVPAVLRQSW-TKSQYPVRLNFYFMQFIPDPADRIYREFG 745
+ D G + E +EM L W +K + + P+ DR + G
Sbjct: 1058 LAVD-------GKKREAYEMSTKPTL---WLSKGEQGIFYMTILSLISPESLDRASQPLG 1107
Query: 746 LFVKSLLPGEAEHLKVDLHLARGRSVMTKLVP---------SGIMQAQQFQEMFLKVILD 796
L +S LP + L LH GR+ VP + + Q F + +
Sbjct: 1108 LLTRSPLPVLPQFL---LHFGGGRNSPVSCVPLTSSVKLEGTTLDQVNMFTLCLFQDVFS 1164
Query: 797 RSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDR 856
++ Y + S Y L+P+ ++ DWK +S + T D
Sbjct: 1165 KA-------------YKSNPDSMPYFLVPINCPNHTGDWKDY-EPMSIIDWETVQYVQDF 1210
Query: 857 KSLPSHGPLQLHNGWSSESD--VENSLVY----ATHKKWFYLVTNIVFEKNGYSPYKDSD 910
++ + P + H W + D +N + + K W +T + P
Sbjct: 1211 ENKQAGKPWE-HKPWLGKPDEYFKNKFITDPFDGSRKLWSVGITKDYKPLDPVPPNTAPR 1269
Query: 911 SSSHVDHL-ISSYGIHLK---------HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE 960
+ ++ I Y L +QP++ A + RNLL + + E +
Sbjct: 1270 KGARKNNSNIMEYSCSLWAKARTRRTFDEEQPVVEATYISLRRNLLD--EFDTGEVETPK 1327
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
+ F L P LK+ S + + LLP+I+HR+E+ L+A+E LL ++
Sbjct: 1328 KCFVILEP----LKVSPLSTTVVAMAYLLPAIIHRVESYLIALEATDLLH------LDIR 1377
Query: 1021 AEMLLKALTTE--------KCQERF------SLERLEILGDAFLKYAVGRHLFLLHDTVD 1066
++ L+A+T + + Q F + ERLE LGD FLK L+ L+ D
Sbjct: 1378 PDLALEAVTKDSDNSEEHGEEQTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSD 1437
Query: 1067 EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIH 1126
E R + N NL A + L +IR F+ ++ G
Sbjct: 1438 EFRYHVDRMCLICNKNLFNTALKLELYRFIRSAAFNRRAWYPEG---------------- 1481
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DDSGFKAATAF 1178
P+ L + + H L K+IADV EA++GA + D+ +A T
Sbjct: 1482 -------PELLRGKTATAPNTHKLGDKSIADVCEAMIGAALLSHHESKSMDNAVRAVTEV 1534
Query: 1179 LK--------WIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLL 1229
+ W ++ + ++ + +A +D+A +E + F + LL
Sbjct: 1535 VNSDNHKAIVWSDYYKLYQKPKY-------QTAVATAAQIDLARQVETKHPYHFKYPRLL 1587
Query: 1230 LQAFVHP----SFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
A HP S+ ++ YQRLEFLGDA+LD + K+ D+ L+
Sbjct: 1588 RSASTHPAYPFSYEQIPS-YQRLEFLGDALLDMV---------QKMVAEYACDINEALIQ 1637
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYV-DYMITPSSTREVKEGPRCPKVLGDLVE 1344
+A D+ ++ ++Y DY IT V++ P+C L D+VE
Sbjct: 1638 AKA----------------DAKRAGKSEDDYAPDYWIT------VRQPPKC---LPDMVE 1672
Query: 1345 SSLGAILLDSGFNLNTVWKIM 1365
+ +GAI +DS + V K
Sbjct: 1673 AFIGAIFVDSEYKFEEVEKFF 1693
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 196 NHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVY 252
+HPYA+I+KDFY+ D + +P+IFGMTASPV A+ N+ K+ LE LL +++
Sbjct: 560 DHPYARIIKDFYRSDTDEPISLPKIFGMTASPV-----DARDNIKKAAEELEGLLHSQIC 614
Query: 253 SVED 256
+ D
Sbjct: 615 TAVD 618
Score = 44.7 bits (104), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI 93
R YQLEL +KA ++N+I L TG GKT IAVLL+
Sbjct: 502 RDYQLELFEKAKKQNLIAVLDTGSGKTFIAVLLL 535
>gi|296812107|ref|XP_002846391.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
gi|238841647|gb|EEQ31309.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
Length = 1437
Score = 204 bits (520), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 185/677 (27%), Positives = 321/677 (47%), Gaps = 86/677 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQ+E+ ++++++NIIV + TG GKT IA+L I L R P I FLAP V L
Sbjct: 57 SRAYQVEMLEESLKQNIIVAMDTGSGKTQIAILRIRH--ELERCPIHKIVWFLAPKVPLA 114
Query: 119 QQQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ I + + ++ R G +R + W+ + ++V PQ+LL L + FI
Sbjct: 115 EQQYLAISKQLPAYQTRILTGADNLERWSTQKIWDAFLLNTRIVVSTPQVLLDALSNGFI 174
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV------PRIFGMTASPVVGKG 229
+ IALL+FDE HH VKS P +IM++FY + ++ P I G+TASP
Sbjct: 175 TLRRIALLVFDEAHHC-VKSA-PENRIMQNFYHAQVHQLRKTNDLPYILGLTASPTSSSA 232
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYV 286
A L ++++ K ++ E++ FV P +R Y ++N+ +
Sbjct: 233 EDALRQLELNLHAC-----CKTPNIH-REEMMQFVHIPELRKVSYQKDLMLLNNLEVKFF 286
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTK----------QLNRLHDSMKFCLENLG 336
+ +I+ + + K HD +S T QL R + + LG
Sbjct: 287 AMLNSI-DIQDDPFFQRYKGK-HDRKSQERYTLALERKTPCLIQLKRCFSKIVYMFSELG 344
Query: 337 VCGALHASYI--LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
+ A ++YI + + +LI+ + D F IC + L
Sbjct: 345 LWAA--STYISEIYRRAHDKKAKLIDQNWSEWDKDDASF----------ICN-----AML 387
Query: 395 SCIEVLKEPFF-------SKKLLRLIGILSTFRLQQHM---KCIVFVNRIVTARALSYIL 444
IE++ E + S+K+ LI +LS+ +H + I+FV + TA L++++
Sbjct: 388 PVIEIMGERHWDTAPDSVSQKVDHLIHLLSS----EHTGTSRGIIFVEQRATAVMLTHLI 443
Query: 445 QNLKFLASWRCHFLVGVNA------GLKSMSRNA-MKSILEKFRSGELNLLVATKVGEEG 497
L + + +G +A + +S+ MK + +SG+ NLLVAT V EEG
Sbjct: 444 SQHPKLTHIKSDYFLGNSAFAARKSDITELSKPGDMKDSINDLKSGKKNLLVATSVLEEG 503
Query: 498 LDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSGNQRELDLIKNFSKEE 554
+D+ C LV+ FD P+ + SF+Q RGRAR S+Y D+ +++ + +++ KE
Sbjct: 504 IDVSACDLVVCFDPPKQLRSFVQRRGRARKANSKYVIFHAEDDTSTKKDWEAMEDIMKER 563
Query: 555 DRMNREIMDRTSSDAFTCSEERIY---KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
N+E++D + +E Y +++S+GA ++ L +CS LP D F +
Sbjct: 564 YSNNKELIDEYLAQESDDEDENDYENLRIESTGALLTLDNARQHLSHFCSTLPCD-FTDI 622
Query: 612 KPKFYYFDDLGGTI--CHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLG 666
+P F + GT+ ++LP + + G E AK+DA +A L+++
Sbjct: 623 QPDFIISKAVAGTMFTAKVLLPTALDPQFREFEGIRTWKKEKMAKRDAAFQAYLQLYEVS 682
Query: 667 ALNDYLLPQEDNATEDE 683
+N++L+P+ + T++E
Sbjct: 683 LVNEHLMPEHCHTTDEE 699
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 187/441 (42%), Gaps = 86/441 (19%)
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQ 1034
+GFSK +PS++H + L+A EL K +LS P G + +++L A++ +
Sbjct: 945 VGFSK----FALFIPSLIHTVGRFLLAEELSKTILS---PIGFK-DIQLVLTAISASSAR 996
Query: 1035 ERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
E + +RLE LGD+ LK L + H EG L+ ++ ++NS L K L
Sbjct: 997 ESTNYQRLEFLGDSALKLHTSMQLLVDHPFWHEGLLSHKKGFIISNSRLWKATIETGLDR 1056
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+I F ++ L + ++ GR + E+ KT
Sbjct: 1057 FILTACFTGAKWRPL------------YNSTYTANAGRVGKNSTREIST---------KT 1095
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLS 1207
+ADVVEAL+GA I D G A L+ W+ + E + +S F +
Sbjct: 1096 LADVVEALIGAAIVDGGEDKALHCLQVFLPEINWLSYEKRIEM-----LYDASPEFHDNA 1150
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
++ +E L+ + F + LL + HPS G YQRLEFLGD++LD ++T L+
Sbjct: 1151 PHDILSKIEPLIDYSFTKKALLATSLSHPSNPISGMTYQRLEFLGDSILDSIVTRALFRS 1210
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
++ + +R+ LVN +Y+ ++ +ST
Sbjct: 1211 NKEIPHQDMHLMRTALVN----------------------------ADYLAFLCMNTSTD 1242
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELL 1387
E +E D+ SS+G + + S ++W+ M L +N QL +R+
Sbjct: 1243 EQRE---------DVSASSIGKVEITSSTRRVSLWQYMSH--SAALDIANAQLATVRKFE 1291
Query: 1388 ELCNSYDLDLQFPSLKKGGKF 1408
EL D +L+ G ++
Sbjct: 1292 ELREKID-----EALRSGTRY 1307
>gi|242076430|ref|XP_002448151.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
gi|241939334|gb|EES12479.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
Length = 194
Score = 204 bits (520), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 118/152 (77%), Gaps = 12/152 (7%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP++IARKYQL+LCK+A+EENI+VYLGTGCGKTHIAVLL+YEL HLIRKP + +CIFLA
Sbjct: 21 KDPRRIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLMYELGHLIRKPSREVCIFLA 80
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
PT+ LV+Q V+ + G K + H WEKEI +YEVLVM PQILL+ L H
Sbjct: 81 PTIPLVRQ------------VQRYYGSGKNSRDHQAWEKEIGEYEVLVMTPQILLHNLRH 128
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMK 204
FIKM+ IALLIFDECHHAQ + HPYA+IMK
Sbjct: 129 CFIKMDSIALLIFDECHHAQAQKRHPYAQIMK 160
>gi|391341486|ref|XP_003745061.1| PREDICTED: endoribonuclease Dicer [Metaseiulus occidentalis]
Length = 1863
Score = 204 bits (520), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 227/470 (48%), Gaps = 55/470 (11%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ + V EG+L+ RS ++
Sbjct: 1359 SPAILLQALTMSNANDGINLERLETVGDSFLKYAITNYLYCTYLGVHEGKLSFLRSKQIS 1418
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPC-QFFALGRRCPRICSK--------ETERTIHSQYD 1130
N NL +L + + F+P + A G P K + I D
Sbjct: 1419 NVNLYRLGKELGIGSLMVATKFEPSDNWLAPGFCIPEGLEKAVLDSKIPNSHCNISQFKD 1478
Query: 1131 GRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-EFE 1189
G A + HH + K+IAD +EAL+GA++ G + W G++V +
Sbjct: 1479 GEASGEGEFVPYSLLTHHSIPDKSIADCLEALIGAYLVSCGRCNTLKCMTWFGLRVLPLD 1538
Query: 1190 ASQVTNICISSKSFLPLSASLDMATLEILL----------GHQFLHRGLLLQAFVHPS-- 1237
+ K PL AS D L LL G++F ++G LLQAF H S
Sbjct: 1539 CEGDAFASLFKKIPPPLPASYDERVLRQLLHGHVSFEERIGYKFKNKGFLLQAFTHASYH 1598
Query: 1238 FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL-KPGQLTDLRSMLVNNQAFANVAVDQ 1296
+N L CYQRLEFLGDAVLDYLIT YLY K PG LTDLRS LVNN FA +AV
Sbjct: 1599 YNTLTDCYQRLEFLGDAVLDYLITRYLYEDPVKQHSPGALTDLRSALVNNTFFAALAVKY 1658
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------------------CPK 1337
F+K+ + S L + I+ +V ST++ G + PK
Sbjct: 1659 EFHKYFLNLSPRLFKLIHRFV-------STKKHLSGKQYFEKYYLGEDECEEAEEIEVPK 1711
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRELLELCNSYDL 1395
LGD+ ES GAI LDSG +L+T W + L+ + P +++ ++ +PIRELLEL
Sbjct: 1712 ALGDIFESVAGAIYLDSGMSLDTTWNVYLAMMKPEIEYFSKHVPKSPIRELLEL-EPQTA 1770
Query: 1396 DLQFPSLKKGGKFLAEAKVTGKDKDVFIS---ACATNLSRKEAIRIASQQ 1442
+ L GK + +V GK + I A + K A+R Q+
Sbjct: 1771 KFEKAELTLNGKIRVKVEVFGKGSFIGIGRNKRIAKCTAAKRALRSVEQR 1820
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 158/655 (24%), Positives = 261/655 (39%), Gaps = 96/655 (14%)
Query: 431 VNRIVTARALSYILQNLKFLASWRCHFLVG-----------VNAGLKSMSRNAMKSILEK 479
+ +V R L + + + LA + +F++G V AGL + +L+K
Sbjct: 418 ITALVVNRWLETVSKTVPSLAFVKSNFIIGQTTLDGDDPELVAAGL-----TRQEEVLQK 472
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
FR + NLL+ T E+ L++ C LV+RFD PE+ S+I + +A+ F +
Sbjct: 473 FRYRDYNLLITTTATEDTLELPHCNLVVRFDPPESYKSYIVCKAKAKASSKCARFFI-ML 531
Query: 540 NQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSE---------ERIYKVDSSGACISA- 589
+Q E + + +M +++R+ + T ER Y+ SSG C+ A
Sbjct: 532 SQYETAKFTHLFSDYRKMEGLLLERSHQEDVTTEGDEGASPSDLERCYR-PSSGDCLVAT 590
Query: 590 -GYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI-HQIVGTPQSS 646
+++++RYC +LP D P F T C + LP N+P+ +IVG P ++
Sbjct: 591 LSNSIAIINRYCLRLPSDTLTKLAPVFRINKLPDDTYQCVLRLPINSPLKEEIVGEPMAT 650
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLFSSDSDSYEGEGSRGE-- 702
AK+D L+A+E LHK G ++D+L P ++ + E + D G G
Sbjct: 651 PVLAKQDVSLRALERLHKRGEIDDHLSPFGKDSLKAKTEDQVVPLDETVAHGAARPGTTK 710
Query: 703 ----LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIP-----------DPADRIYREFGLF 747
H+ L P T++ + ++ + IP DPAD R FG
Sbjct: 711 RRQYYHKSLAPPFQGTLDTETFFLYNISMKLLCAIPEEQNSRARTIYDPADSP-RGFGFV 769
Query: 748 VKSLLPGEAEHLKVDLHLARGRSVMTKL------VPSGIMQAQQFQEMFLKVILDRSEFN 801
+ L L R VM + +P + + Q+ + F + R
Sbjct: 770 SGTRL----TPLCPFPIYTRSGEVMVDVEELSCALP--LTEEQRKKAEFFHAYVFRDVLR 823
Query: 802 SEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPS 861
E P+ D +S +L++P+ SV+W I R ++ F VD + S
Sbjct: 824 LEKFPMKFD---LKASRAGFLIIPIT--DGSVEWSFIDRIMNEDEFKP--HKVDEEERRS 876
Query: 862 HGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISS 921
N V K F+ V NI + S + + + D+
Sbjct: 877 F----TFNREIFSDAVVMPWYRNIDKPQFFYVANICEQLTPVSEFPATPFKTFDDYYRHK 932
Query: 922 YGIHLKHPKQPLLRAKPLFRLRNLLHNRKL-----------EDSESHELEEYFDD--LPP 968
Y I + + QPLL NLL R + E+S + E L P
Sbjct: 933 YNIGICNKSQPLLDVDHTSARLNLLTPRYVNRKGVSLPTSSEESRKAKRENLQQKQILVP 992
Query: 969 ELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL-------SASFPEG 1016
ELC I F + + LP I++R+ +LL+A ++ + A PEG
Sbjct: 993 ELCL--IHPFPASLWRKVVCLPCILYRMNHLLLADSIRMRIVNACGVGKAELPEG 1045
>gi|158706455|sp|Q2H0G2.2|DCL1_CHAGB RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1607
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 290/647 (44%), Gaps = 67/647 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL ++A +N I L TG GKT IA LL+ EL ++ K I FL
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
VALV QQ V+ ++ + + FCG + W K D+ +V +IL CL H +
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDVTQDFWHKTFDENMAIVCTAEILYQCLTHSY 255
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK--PDIMKVPRIF-GMTASPVVGKGAS 231
I+M+ + LL+FDE HH K NHPYA+I+KDFY D+ K RI MTASPV +
Sbjct: 256 IRMDQVNLLVFDEAHH--TKKNHPYARIIKDFYAEVKDLNKRLRISRAMTASPVDAQIDP 313
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A P+ LE LL +++ +V D L + SS ++ + + Y C
Sbjct: 314 KIARSPE----LEGLLHSQIATVADPTALHN--SSTKLK--------REVTVEYGKC--- 356
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
L E + + L+R L D L + + LG A + G+
Sbjct: 357 LPEFE-----TGLNRALKD---LVGEHRLFQKPFAFTATAASELGPWCADRYWQLFFRGE 408
Query: 352 ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP---FFSKK 408
E+++ E T + L + S S+ AA + A L P S K
Sbjct: 409 -----EVVKLEAKTEREILRK--SAYSQEIAAQVNKVREAHRLVGQHEFASPSSDLLSSK 461
Query: 409 LLRLIGIL-STFRLQQH-MKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVNA-- 463
++ L+ IL FR H +CIVFV + A L+ +LQ + + LVG
Sbjct: 462 VVILLRILRGEFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGLEPGILVGGGRPE 521
Query: 464 ----GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
K R+ + +I+ KF+ GELN + AT V EEGLDI C ++IR+DL T+ +I
Sbjct: 522 ASYDNAKVTYRDQVLTII-KFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYI 580
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS------ 573
QSRGRAR S Y +V+S N+ + + + ED + + + T +
Sbjct: 581 QSRGRARQEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEALPADRKLTGNNFDMEY 640
Query: 574 ------EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH 627
++R Y V +GA ++ + L + + LPH N + GG C
Sbjct: 641 FLRKEKDQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTAGYLVLSVPGGYQCE 700
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ LP ++PI G +S AK A + L K L+ +L P
Sbjct: 701 VTLPESSPIRSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLRP 747
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 215/513 (41%), Gaps = 105/513 (20%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDIGSS 985
QP++ A+ L RNLL + +D DL P+ C L+I D+ +
Sbjct: 1000 QPVVEAEVLPIRRNLLDDHIGDD-----------DLEPKPCFIVLEPLRISPLPVDLVAM 1048
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL 1039
P+IMHR+++ LVA+E +L+ + V ++ L+A T E E+ S
Sbjct: 1049 AYNFPAIMHRIDSNLVALEACKMLNLN------VRPDLALEAFTKDSDNSGEHDAEQISF 1102
Query: 1040 --------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
ERLE LGD FLK A +F L E E R + N NL A
Sbjct: 1103 QSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALEVK 1162
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH 1151
L+ +IR FD ++ G + K+ R H L
Sbjct: 1163 LEEHIRSMAFDRRSWYPEGLTLKKGKRKDLTR-----------------------QHVLA 1199
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAF---LKWIGIQVEFEASQVTNICISSKSFLPL-- 1206
KTIADV EAL+GA + + F ++ + + V+ + +T+ ++ P
Sbjct: 1200 DKTIADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAW 1259
Query: 1207 ------SASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVL 1256
S LDMA E +G+ F H LL AF HP++ + YQRLEFLGDA+L
Sbjct: 1260 QTAPCNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALL 1319
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D +L+ +P P LT+ + +V+NQ +AV F++ + + ++ + + I Y
Sbjct: 1320 DMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFHRAISYCASAIQKEITEY 1379
Query: 1317 V------------DYMITPSSTREVKEGP--------------RC---PKVLGDLVESSL 1347
V D TP + P RC PK L D+VE+ +
Sbjct: 1380 VTEIEDALQSARDDASKTPCNRHATTPSPGDLPAESFARDFWVRCSRPPKCLPDVVEAYV 1439
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
GA+ +DS ++ V + P F +++L
Sbjct: 1440 GAVFVDSRYDFARVRAFFADHVRPF--FEDMRL 1470
>gi|345571082|gb|EGX53897.1| hypothetical protein AOL_s00004g556 [Arthrobotrys oligospora ATCC
24927]
Length = 1587
Score = 204 bits (519), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 258/1066 (24%), Positives = 436/1066 (40%), Gaps = 184/1066 (17%)
Query: 405 FSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF-----L 458
FS KL L+ L F KCI+FV R TA+ + I + + F+ R H L
Sbjct: 489 FSPKLFILLRFLVHAFDQHPEYKCIIFVTRRHTAQCIQAIFKKV-FIQHGRDHLIRLGTL 547
Query: 459 VGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VG + G SM+ A L +F+ G N L+AT V EEGLD+ C LVIRFDL +T+
Sbjct: 548 VGSSGQHGTDSMTFRAQTLALHRFKKGVTNCLIATAVAEEGLDVPDCNLVIRFDLYDTMI 607
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREIMDRTSS 567
++QSRGRAR S Y +V+ N ++++ + E M +R + + +
Sbjct: 608 KYVQSRGRARHATSTYIHMVEQNNWTHKRMVQDGQEAEKIMKEFCSKLPEDRLLDKQAPT 667
Query: 568 DAF--TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT- 624
D F +++ Y V +GA ++ + +L+++ L +E + Y G
Sbjct: 668 DIFGPDPTDDMTYIVPETGAKLTLNSSMQILNQFADHLGTEEGIASEHVMYIVQAQPGHG 727
Query: 625 -ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
C + +P +PI ++G S AAK+ A +A + LH L+DYL+P
Sbjct: 728 FKCEVKMPEISPIRSVLGDTARSKGAAKRHAAFEACKKLHHGKYLDDYLMPIYTKRL--R 785
Query: 684 PMLFSSD--SDSYEGEGSRGELHEMLVPAVLRQS-WTKSQYPVRLNFYFMQFI---PDPA 737
PM+ ++ DS++ P+ ++ S W + + PV + P+
Sbjct: 786 PMMANAHLAVDSHKLSS---------YPSQIKPSFWDRKEPPVPTRLWATCLTLRHPNQL 836
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGRS------VMTKLVPSGIMQAQQFQEMFL 791
++ + L + P + L+ RG M + + +QF E
Sbjct: 837 EKPSQGICLATRDKPP---KFPSFTLYFDRGGQSLVDCVTMDDPIICDENKIKQFNEFTS 893
Query: 792 KVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---------NSVDWKIIRRCL 842
+ +D FN EF D E Y +LP+ +K + +DW+++
Sbjct: 894 RFFIDI--FNKEF-----DIQTEKLP---YWVLPIKLNKTVTSASSIDDMIDWELVMN-- 941
Query: 843 SSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNG 902
VF P + D + P + + G + S + FY++ + +
Sbjct: 942 ---VFKNPEENFDLATTPP----EFYFGKFVIDRRQGS-------RRFYILDH----EPK 983
Query: 903 YSPYKD-SDSSSHVDHLIS----SYGIHLKH---------PKQPLLRAKPLFRLRNLLHN 948
Y PY + +S+ H +S SY K P QP+L A + N L
Sbjct: 984 YHPYDPIPEGASNAPHTVSIIDYSYSAGKKGWQRWVGDLPPDQPVLIADRVLHRLNFL-E 1042
Query: 949 RKLEDSESHELEEY-------FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
R E ++ Y LP + C + + L P+I+ R++ L
Sbjct: 1043 RPTEREKTQNTMAYVVPSPFRVSPLPAKFCTMGL------------LFPAIITRIDAYLQ 1090
Query: 1002 AIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQER------------FSLERLEILG- 1046
A ++ L ++ E+ L+A+T ++ QE + ERLE LG
Sbjct: 1091 AYDVCKLFK------VQIDLELALEAITKDSDNTQEHDEEPQNKRRGMVTNYERLEFLGG 1144
Query: 1047 ---DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP 1103
+ FLK L+ + DE R V N +L + A L YI+ + F
Sbjct: 1145 ELNNCFLKLGTTIALYSTNPDQDEFAYHVERMVLVCNRSLYERAVELELYKYIQSEGFSR 1204
Query: 1104 CQFFALGR--RCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ + + + E++RT H L K++ADV EA
Sbjct: 1205 RLWYPMITLIKGKAVGKTESQRT-----------------------HRLSDKSMADVCEA 1241
Query: 1162 LVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTN----ICISSKSFLPLSASLD--MATL 1215
L+GA + G A + + + + + + + P++AS +
Sbjct: 1242 LIGASLCGGGLDMAARMVTTLVNKSIHKVNSFKDYYSLYTLPEYQIGPVNASQQELADKI 1301
Query: 1216 EILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
E +G++F + LL AF HPSF + CY+RLEFLGDA++D L+ +P
Sbjct: 1302 ERDMGYKFKYPRLLRSAFTHPSFPTMWEKIPCYERLEFLGDALIDMACVEDLWERFPGKD 1361
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-----MITPSSTR 1327
P LT+ + ++NN+ ++V F+ L ++ + YV + + S
Sbjct: 1362 PQWLTEHKMSMINNRFQGALSVKLKFHTHLRAMGAHINSAVQEYVQLIEEARIASNDSVD 1421
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
+ + PKVL D++E+ +GAI +DSGFN + V + + P
Sbjct: 1422 YWIDAKQPPKVLPDILEAYVGAIFVDSGFNYDVVTSFFRTHVRPFF 1467
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 18/235 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS-----ICIFLAPT 114
R+YQLEL ++A +N I L TG GKT IA LLI + L + +KS +C+FL +
Sbjct: 163 REYQLELFERAKMDNTIAVLDTGSGKTLIATLLIRWMLELELEERKSGRSPKVCVFLVNS 222
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V+E ++ +V +CG L + W+ + ++V IL CL H
Sbjct: 223 VTLVFQQAAVLECNLDAQVGKYCGDMGTDLWTKSQWDARLKSDRIIVATADILWNCLTHS 282
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASA 232
FI+M I LLIFDECHH K H YA+IM+DFY+ + + PRIFGMTASPV A
Sbjct: 283 FIRMSDICLLIFDECHH--TKKQHAYARIMRDFYETEKEENRPRIFGMTASPV-----DA 335
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY----GPVINDTSS 283
+ + K+ + LE L+ +++ + + + F+ P +Y PVI + +S
Sbjct: 336 RVDPVKAAHQLERLMHSRICTTSNPAYMRKFLPRPEEMTLEYQGVPTPVITELNS 390
>gi|395331143|gb|EJF63525.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1526
Score = 203 bits (517), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 191/696 (27%), Positives = 307/696 (44%), Gaps = 99/696 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQ EL ++ NI++ L TG GKTHIAVL + YE RK + F+APTVALV
Sbjct: 23 RAYQQELLDESKRRNIVIALDTGSGKTHIAVLRVKYEAERESRK----VSWFIAPTVALV 78
Query: 119 QQQAKVIEESIGFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
+QQ++VI+ +I V G S+ + K W I ++ ++V PQ+LL L+H ++
Sbjct: 79 EQQSEVIKTAIPVSVGYVSGASEPNQWKDAGLWRGIIAKHRIMVTTPQVLLDALHHGYVD 138
Query: 177 M-ELIALLIFDECHHAQVKSNHPYAKIMKDFY---------KPDIMKV-PRIFGMTASPV 225
M I+LL+FDE HHA K HPY IMK Y +V P + G+TASP
Sbjct: 139 MGSDISLLVFDEAHHAIGK--HPYNMIMKKHYFGLPPRSPLGTSTSRVRPMVLGLTASPT 196
Query: 226 VGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDT--- 281
G AN+ + LE LD+ + S + +L +V P + Y I+
Sbjct: 197 YG------ANVDVAFRDLEKNLDSTIRSSRNNRHELAQYVHRPEFKHVIYASPIHVQDGI 250
Query: 282 -SSSYVTCSEQLAEIKREQYISALS-----RKLHDHQSLRNTTKQLNR--------LHDS 327
S +Y +AE+ EQ S ++ KL R +QL++ H
Sbjct: 251 PSVNYKALEVVIAELDIEQDPSVIALRARLAKLQPGDDRRRVDQQLSKALDKKDTFTHKG 310
Query: 328 MK-FCLENLGVC---GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA 383
++ F +C G A + + E + N ++ + + +
Sbjct: 311 LRDFARTAADICIDLGTWAADWYIARVIERAKQ-----AANPYNNIMSAWQEKEKRYLLG 365
Query: 384 ICRRDGI---ASDLSCIEVLKEPFFSKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARA 439
I R + + D+ I P + L+ + FR + + I+FV R T
Sbjct: 366 ILNRVSVMEPSEDIEQIVANLTPKVRTLVDSLLVEEALFRSMDEEYSGIIFVTRRDTVLV 425
Query: 440 LSYILQNLKFLAS-WRCHFLVGVNAGLK---------SMSRNAMKSILEKFRSGELNLLV 489
L+ +L+ + + +R L+G ++ K SM + +L F+ G+ NL+V
Sbjct: 426 LAELLRRIPETSHLFRIGCLLGSSSSFKRHSFLDITRSMLDESQSDVLRDFKIGDKNLIV 485
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKN 549
+T V EEG+DIQ C V+RFD+P V S+ QSRGRAR +S + + D RE +++
Sbjct: 486 STSVAEEGIDIQACGSVVRFDIPPNVVSWAQSRGRARRKRSSFVIMFDQAEPRE--VVRK 543
Query: 550 FSKEEDRMNREIMDRTSSDAFTCSEERI--------YKVDSSGACISAGYGVSLLHRYCS 601
+ + E RM D A + E+ ++V S+GA ++ V L+ +C+
Sbjct: 544 WEETERRMMAAYNDPRRDAAASVEEDDFDDLDGYCEFEVASTGALLTIHTAVPHLNHFCA 603
Query: 602 KLP-----------------HDEFFNPKPKFYYFDD--LGGTICHIILPANAPIHQ---I 639
+P + E ++ P+ F + G + LP P H
Sbjct: 604 VIPTGGHEHLVPIYELDPPDYAEGWHALPEHARFTERYTGPWGATVTLPRALPPHLRKFS 663
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
V + A++ +A L++ G LN++LLP
Sbjct: 664 VDRIHRTKRRAQQRVAFEAYVALYQAGLLNNHLLPH 699
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 239/570 (41%), Gaps = 88/570 (15%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP----PELCQLKIIGFSKDIGSSLS 987
PLL + L + RN L ED++ HE+ D P P+ +++ ++ +L
Sbjct: 928 PLLVVRSLPKRRNFLIPFPEEDTD-HEIPSQSGDAPFLLHPQYTLVELAS-QTEVQYTL- 984
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
LLPSI+ L L L+ L P V+ L+ A+T QERF +RLE LGD
Sbjct: 985 LLPSILRWLAMALTVHSLRTSLFKQNPVST-VALRHLVTAITAPAAQERFHYQRLETLGD 1043
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ-- 1105
LK+ L+ EG L+R++ +AV N NL + A + L +I F P +
Sbjct: 1044 TVLKFITSNLLYADFPLWHEGYLSRKKDHAVANVNLARWAVKKGLYRWIIRDRFIPRKWK 1103
Query: 1106 --FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALV 1163
+ + I + + D A + + E R K L K +ADVVE+L+
Sbjct: 1104 PHYSSAAGAFDEILDDRSREGTPTASDAAAQNGNSKESRKGKAED-LSTKMLADVVESLI 1162
Query: 1164 GAFIDDSGFKAA----TAF---LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLE 1216
GA +D GF A TAF L W + A + +P +A +E
Sbjct: 1163 GAAYEDGGFDRAIDCVTAFNLGLSWKKLPEYIGAMH----AVDDIDDIPEQ----LALVE 1214
Query: 1217 ILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK-LKP 1273
++ ++F R L+QA H S+ + +RLEFLGDA LD ++ YLY K P
Sbjct: 1215 QMINYRFARRTFLVQALTHASYQGDFATMSLERLEFLGDAALDMIVVDYLYHAEGKDYSP 1274
Query: 1274 GQLTDLRSMLVNNQAFANV----------------------AVDQS----FYKFLIFDSN 1307
G + + +VN+ A AVD S ++ L+ S+
Sbjct: 1275 GYMHIKKMAVVNSHILAYTCLKTAVTVESTMPTWSPEHGLEAVDDSQQVYLWQCLLHSSH 1334
Query: 1308 VLSETIN-NYVDYMITPSSTREVKEGP-----------RCPKVLGDLVESSLGAILLDSG 1355
+ E N ++ Y + + E + PK + D+VES LGA+ +DS
Sbjct: 1335 RVLEDQNLTFLRYQKHGAEIADALENDAVYPWAGLTSLQAPKFISDMVESILGAVYVDSF 1394
Query: 1356 FNLNTVWKIM-----LSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLA 1410
+L V ++M + L+ ++ L+P+ L+ + + +
Sbjct: 1395 GDLGKVRQVMETLGLMRVLERVVHDDVDALHPVSR-----------LEIWAAQHKPRKEV 1443
Query: 1411 EAKVTGKDKDVFISACATNLSRKEAIRIAS 1440
E K+T + DV CA + KE +++ +
Sbjct: 1444 EYKLTKEKGDV---TCAVYIDEKELLQVTA 1470
>gi|371496114|gb|AEX31636.1| Dicer 2 [Aedes albopictus]
Length = 821
Score = 203 bits (517), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 177/658 (26%), Positives = 309/658 (46%), Gaps = 59/658 (8%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+ R YQ + M++N I+YL TG GKTHIA++ I E+ + KP F+ T
Sbjct: 12 VPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKRTFFVVNT 71
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
VAL +QQA+ + ++ + + D W E +++V+V QILL L H
Sbjct: 72 VALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQILLDVLKHG 131
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++ ++ I LLIFDECHH HP IM+ F + PR+ G++ + + +
Sbjct: 132 YLSIKHINLLIFDECHHGV--GEHPMHGIMEQFLRVPKSDHPRVIGLSGMLLYKQIKTVD 189
Query: 234 ANLPKSINSLENLLDAKVYSVEDAE---DLESFVSSPVVRVYQY-----GPVINDTSSSY 285
P+ + LEN ++ + +V + ++ F ++P + Y PV+ D S
Sbjct: 190 QVSPE-LERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYDSLRLSPVMVDIVRSI 248
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
S+ + + +Y++ + D K++ +L + + L + G+ G A
Sbjct: 249 EAFSQTINDFHLPKYLNQNKALMKDRPK---PLKEIKKLFTELVYQLGDTGLFGCSIALL 305
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DGIASDLSCIEVLKEP 403
L+ E + D S+ R A ++ F R + + S L E L
Sbjct: 306 GLIVQ--------FELDKRQSDSSMLRLALRSCITFCESLRHQIEKLMSGLDIKEKLTR- 356
Query: 404 FFSKKLLRLIGILSTF---RLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCH---- 456
F S K+ +LI L + K +VFV R +A+ L ++L+ + F +
Sbjct: 357 FSSLKIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLK-IYFSQTEDADLILP 415
Query: 457 -FLVGVNAGL-----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
F+VG N + + +S + ++E+F+ E N++V T V EEG+D+Q C VI++D
Sbjct: 416 DFMVGSNGSMPESIEQILSAKKDRRVIERFKRNETNVIVTTNVLEEGIDLQMCNTVIKYD 475
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDS-GNQRELDLIKNFSKEEDRMNREIMDRTSS-- 567
P+T AS+ QS+GRARM S+Y ++++ Q+ L+ + + E + R ++ +T +
Sbjct: 476 HPQTFASYQQSKGRARMKDSQYMVMLNNEERQKFLEKYRLYKSIEQELQRCLIGKTINRP 535
Query: 568 ---DAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
DA E +Y + GA + A V LL+RYC +P D F N +
Sbjct: 536 DPLDADVHKE--LYNEIIPPFFTAKGAKLDALSAVQLLNRYCMGMPRDAFTNTNVTWERV 593
Query: 619 DDLGGTI-CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
D G I ++LP + + + I+G P +++ AK+ A A L++ L+++L+P
Sbjct: 594 DLKNGQIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLIP 651
>gi|332029751|gb|EGI69620.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1257
Score = 202 bits (515), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 230/471 (48%), Gaps = 75/471 (15%)
Query: 1012 SFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
SF +G S E ++ ALTT+ + F+LERLE LGD++LK+ V L+ T +EG+LT
Sbjct: 770 SFSQGPN-SIE-IVHALTTKLGSDMFNLERLETLGDSYLKFIVSLFLYHKFPTFNEGQLT 827
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFA----------------------- 1108
+ + N NL + + I++ F P F
Sbjct: 828 ALKGKMIGNRNLYYCGNKKGIPGRIKNDAFVPMSNFIPPAYSVYHPLQKILMDELVAPNV 887
Query: 1109 ----LGRRCPRICSKETERTIH------SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
L R +E T++ S +D R D V G L KT+AD
Sbjct: 888 LYEFLIPNMERFTGYISEDTLNMMKQTVSSWDKR---DKQTGVEHYLGVQILSDKTVADS 944
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD------- 1211
VEAL+G ++ ++ K A LKW GI + + ++ + S S P+ D
Sbjct: 945 VEALIGVYLKNNHIKGAAKLLKWFGILPDVK----IDMLLGSISQNPVIGVGDPNYYMPW 1000
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYP 1269
TLE +G++F +R LLQAF HPS+ N + CYQRLEFLGDA+LD+LIT Y+Y
Sbjct: 1001 ADTLESKIGYKFKNRAFLLQAFTHPSYTANGITECYQRLEFLGDAILDFLITCYIYENDV 1060
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITP 1323
L PG LTDLRS LVNN FA ++V + L+ + L E I+ +V DY++
Sbjct: 1061 NLSPGDLTDLRSALVNNITFACLSVRHGLHTALLAYAPKLHEIIDCFVRFQEERDYVVND 1120
Query: 1324 SSTREVKEGPRC--------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILK 1374
+ E C PKVLGDL ES +GAI LDSG NL VW+I+ SF+ I +
Sbjct: 1121 ELLYVLIEEDECNITEYVDVPKVLGDLFESLIGAIYLDSGKNLTKVWEIIYSFMHKEIDE 1180
Query: 1375 FS-NLQLNPIRELLE---LCNSYDLDLQFPSLKKGGKFLAEAKVT--GKDK 1419
FS N+ PIR + E +C + L+ +K G + K+T GK+K
Sbjct: 1181 FSRNIPKQPIRVIYENTDICPKF---LEATLIKGTGMIMVPLKITIAGKEK 1228
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
K +L++ ++G N +VAT V +EG+DI C L+IR+D+P +++QS+GRAR S Y
Sbjct: 126 KEVLQRLKNGSSNCIVATDVVDEGIDIPMCTLIIRYDVPTDFRAYVQSKGRARHNLSSYL 185
Query: 534 FLVDSGNQRELDLIKNFSKEEDRMNR--------------EIMDRTSSDAFTCSEERIYK 579
LV++ ++ L + E ++ R +I++ SD F +
Sbjct: 186 ILVENDDEDFLKKYHQYKDTEKKLKRILVGKNERPLPTQDDIVNGLYSD-FDIEPYTVKC 244
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHII--LPANAPIH 637
D + ++ + L++ YC+ L +F P + D + I LP +P+
Sbjct: 245 DDVVKSRLTEFTAIDLINMYCAALLTSKFVYLVPIWKLDKDDSKNMYRISLKLPNLSPLK 304
Query: 638 QIV-GTPQSSMEAAKKDACLKAIEDLHKLGAL 668
++ G S++ AK+ +K LHKLGAL
Sbjct: 305 DVIYGDFMRSIDGAKRSVAMKTCIQLHKLGAL 336
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 75 IIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTVALVQQQAKVIEESIGF 131
+I+YL TG GKT+IAV+L+ L+ +RKP + IF+ TVALV+QQ+ I+
Sbjct: 1 MILYLPTGAGKTYIAVMLLKHLSRDVRKPYQEGGKRSIFVVNTVALVEQQSTYIKRHTDL 60
Query: 132 KVRTFCG 138
+ + + G
Sbjct: 61 RCKGYSG 67
Score = 44.3 bits (103), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 875 SDVENSLVYATHK-KWFYLVTNIV--FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQ 931
SD E +LV ++ Y+VT + Y P +D D+ +H + +G+ +++ +Q
Sbjct: 496 SDYELALVAPNYRYNAVYIVTRVCDDLTPESYFPNEDFDTYTH--YYKEKHGLIIENLQQ 553
Query: 932 PLLRAKPLFRLRNLLHNRKLE---------DSESHELEEYFDDLPPELCQLKIIGFSKDI 982
+L KP+ N + RKL D +L+E+ L PELC I F
Sbjct: 554 SMLEVKPIPIKINYIKPRKLSEGPLKNKKTDDTVEDLQEH---LVPELCYK--INFPSVY 608
Query: 983 GSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+ LPSI+HR+ +L+A +L+ ++ G ++LK ++ K +E S+ER
Sbjct: 609 WLKATTLPSILHRICQILIAEDLRVTIARETKLGT-----LILKESSSLKIEE--SVER 660
>gi|449549195|gb|EMD40161.1| hypothetical protein CERSUDRAFT_112373 [Ceriporiopsis subvermispora
B]
Length = 1511
Score = 202 bits (515), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 213/707 (30%), Positives = 327/707 (46%), Gaps = 126/707 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++ NI++ + TG GKTHIAVL + A R+ QK I FLAPTVALV+
Sbjct: 23 RGYQKEMLDESLRRNIVIAMDTGSGKTHIAVLRMKLEAE--RETQK-ISWFLAPTVALVE 79
Query: 120 QQAKVIEESIGFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ +VI +I V G S+ + K W K I + ++V PQ+LL L+H +I +
Sbjct: 80 QQREVIASAIPVSVGIISGASEPNQWKDANLWRKIIQTHRIMVTTPQVLLDALHHAYIDL 139
Query: 178 -ELIALLIFDECHHAQVKSNHPYAKIMKDFY---------KPDIMKV-PRIFGMTASPVV 226
I LL+FDE HHA VK HPY +M +FY + +V P I G+TASPV
Sbjct: 140 GRDIGLLVFDEAHHA-VKV-HPYNAVMSNFYFDLPPRDPTRGSQGRVRPMILGLTASPVY 197
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVV---------------- 269
G N+ KS LE LD+ + S + ++L V PV
Sbjct: 198 G------GNVDKSFMVLEKNLDSVIRSTRLNQDELAQHVHRPVFQHLLYTIPEYDWDHIP 251
Query: 270 -RVYQYGPVINDT----SSSYV-TCSEQLAEI----KREQYISALSRKL-----HDHQSL 314
R YQ + D+ YV + +QLA++ +R + LS+ + H+ L
Sbjct: 252 SRNYQALRAVVDSLNIEDDPYVASLRQQLAKLPPGDERVRVDQKLSKTIGKEDTFTHKGL 311
Query: 315 RNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFA 374
R+ + + + CL +LGV A YI+ E ++ I A + ++ + +
Sbjct: 312 RDFARA------AQEICL-DLGVWAA--DWYIV----EVIKRAKIAA--DPYNNVMSNWQ 356
Query: 375 SQASEVFAAICRR--DGIASDLSCIEVLKEPFFSKKLLRLI-GILSTFRLQQH----MKC 427
+ +I R + SD + L+ S K+ RL+ G+LS + +
Sbjct: 357 EKEKRYLLSIIGRVQAVLPSDNTEDIRLRS---SSKVHRLVGGLLSEYAKAESEGETYSG 413
Query: 428 IVFVNRIVTARALSYILQNLKFLA-------------SWRCHFLVGVNAGLKSMSRNAMK 474
+VFV R T ALS +L +A S++ H + + +S+ +++
Sbjct: 414 LVFVTRRDTVVALSELLSRFPEVAQRFNIGCLLGSSNSFQRHSFLDIT---RSIPKDSQS 470
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+ L F+ G+ NL+++T V EEG+DIQ C VIRFD P + S+ QSRGRAR +S +
Sbjct: 471 ATLRDFKIGDKNLIISTSVAEEGIDIQACGSVIRFDPPVNMVSWAQSRGRARRKKSTFIL 530
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC--------SEERIYKVDSSGAC 586
+ + G L++ + E RM + + S DA + E Y V+S+GA
Sbjct: 531 MFEDGGVHH-KLVQQWEDIEARM-MALYNDVSRDAASAPEPEDDEDDESEEYVVESTGAV 588
Query: 587 ISAGYGVSLLHRYCSKLP---HDEF-----FNPK--PKFYYFDD------LGGTICHIIL 630
++ S L+ +CS LP H +F +P P+ ++ G + L
Sbjct: 589 LTLHSATSHLNHFCSVLPSAHHGDFLPVYDLDPPEFPEGWHVTREAVPIYTGPWGAKVTL 648
Query: 631 PANAPIHQIVGTPQ---SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
P P V + + S +A + A KA LHK G LND LLP
Sbjct: 649 PRALPKDLRVFSTECVYGSKRSAHRHAAFKAYVALHKAGLLNDNLLP 695
Score = 114 bits (284), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 234/536 (43%), Gaps = 87/536 (16%)
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
P+ + ++ S+D L+PSIM L + L+ L A P +EV +L A
Sbjct: 958 PQFATVDLV--SRDDLQYALLIPSIMRWCSITLTVMSLRKQLLAKNP-ISEVPLALLTTA 1014
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
T QE+ + +RLE LGD LK+ LF + EG L RR+ +AV+N+ L + A
Sbjct: 1015 TTAPVAQEQTNYQRLETLGDTVLKFLASLQLFAQYPLWHEGYLARRKDHAVSNARLAREA 1074
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGR-RCPRICSKETERTIHSQYDGRAPDDLNAEVRCS-- 1144
L +I + F P ++ L R + P E +I S+ D P + EV
Sbjct: 1075 LGKCLYRWIIRERFVPRKWKPLYRVQEPSTIITNAEHSISSEQDS-IPVEAEQEVDTELQ 1133
Query: 1145 ------KGHHWLHKKTIADVVEALVGAFIDDSGFKAAT--AFLKWIGIQVEFEASQVTNI 1196
K L K +ADVVEAL+GA + GF A A L +G+ + +++ I
Sbjct: 1134 KKLKKKKQSQQLSTKVLADVVEALIGASYEHGGFDLAADCAALFGMGLTWKKVPDRISEI 1193
Query: 1197 CISSKSFLPL-SASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGD 1253
++ PL + +E +L + F + LL++A H S++ Y+RLEFLGD
Sbjct: 1194 LARTE---PLEEPPTQLYLVERILNYTFKRKELLVEALTHASYHGEHAAMSYERLEFLGD 1250
Query: 1254 AVLDYLITSYLYSVYPK-LKPGQLTDLRSMLVNN--------QAFANVAVDQSFY----- 1299
LD ++T YLY K PG + + LVN+ +AF + +
Sbjct: 1251 CALDMVVTDYLYHAPGKEYTPGHMHLRKESLVNSHFLAFICLRAFTTTEATSAHWTPKKG 1310
Query: 1300 -------------KFLIFDSNVLSETINNYVDYMITPSSTREVKE--------------G 1332
+ L+ S + E + ++ + S R+++E
Sbjct: 1311 TSTTTEHQQIHLHQCLMHSSRRVLE--DQHIAFSRFEKSGRKIEEMLLRGTMYPWAALTS 1368
Query: 1333 PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNS 1392
+ PK L D++ES LGA+ LD+ +L V ++M ++ I E++E
Sbjct: 1369 LQAPKFLSDMLESLLGAVYLDTEGSLEAVREVM-------------RVLGIIEVMEHIVM 1415
Query: 1393 YDLDLQFP-------SLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQ 1441
D+D+Q P + ++ + + ++ KD +V +CA + +E IRI +
Sbjct: 1416 ADVDVQHPVSRLAIWAAQQVPQHKIKYEIEKKDGNV---SCAVVMDGEEIIRITEK 1468
>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1519
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 186/646 (28%), Positives = 293/646 (45%), Gaps = 74/646 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL--AHLIRKPQKS---ICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ + LI + + I FL +
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V+ ++ V F G L + W + ++ V+V +IL CL +
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASA 232
+I M+ I LL+FDE HH K +HPYA+I++D Y + PRIFGMTASPV KG
Sbjct: 230 YITMQQINLLVFDEAHH--TKKDHPYARIIRDSYLRVPPSSRPRIFGMTASPVDTKGDVL 287
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND-TSSSYVTCSEQ 291
+A +LE LLD+K+ + L V+ P V+ Y + TS Y +
Sbjct: 288 EA-----ARNLEALLDSKIATTSKLTILRQVVNRPNEEVWIYDKLQPTFTSDLYKLMESR 342
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNR-----LHDSMKFCLENLGVCGALHASYI 346
+I + + +R H + T +R L D + +E + G ++ +
Sbjct: 343 FGDISHLEPMFRFAR----HATSELGTWCADRVWVSALADDVLPKVEG-SIGGKRQSTGL 397
Query: 347 LLSGDETMRN--------ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
+ R+ EL+E+ + +S+ ++ I + G ++ CI
Sbjct: 398 GQLPKDVHRDITRIKEASELVESHPPNDPGAPEALSSKVRVLWKEISQCFGQETNTKCIV 457
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
++ + +K L L +L+ L+ + ++ R+ I N+ F R L
Sbjct: 458 FTEKRYTAKVLFDLFTVLNVPGLRPGV--------LIGVRSSDRIGMNVTF----RQQIL 505
Query: 459 VGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
V +FR+GE+N L AT V EEGLDI C LV+RFDL +T+ +
Sbjct: 506 TMV-----------------RFRTGEINCLFATAVAEEGLDIPDCNLVVRFDLYKTLIQY 548
Query: 519 IQSRGRARMPQSEYAFLVDSGN-QRELDLIKNFSKE-----------EDRMNREIMDRTS 566
+QSRGRAR S YA +++ N E L++ E EDR+ D T
Sbjct: 549 VQSRGRARHADSTYASMIEKDNADHESILVQVNDAEKIMQSFCQLLPEDRILHGNDDDTD 608
Query: 567 SDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC 626
+ E Y + S+ A ++ +++L RY S L ++ + + + +C
Sbjct: 609 AVLDREEWEEPYTLPSTAARLTHHSAITVLARYASSLQYENDTSAQVTYVVLPVNDAYVC 668
Query: 627 HIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+ILP +PI G P AK+ A +A L K L++YL
Sbjct: 669 EVILPEKSPIRGATGMPAMKKSTAKRYAAFEACRLLRKHRLLDEYL 714
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 202/469 (43%), Gaps = 74/469 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L A+ L RLR L +R + E P LKI I ++ P
Sbjct: 961 QPVLHAE-LVRLRRNLLDRMTDKERKLETRSVICIEP-----LKISAIPAAIAATCLAFP 1014
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFS---------- 1038
+I+ RL+ L+ +E L G E+S E L+ALT ++ E S
Sbjct: 1015 AIISRLDAYLIGLEACKKL------GLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMG 1068
Query: 1039 --LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGD FLK A LF H +E + R + N NL A + L +I
Sbjct: 1069 KNYERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFI 1128
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R + F ++ G + HS+ G S+ H L +KTIA
Sbjct: 1129 RSRGFSRDTWYPEGLTL-------LQGRDHSKKIG------------SESKHALAEKTIA 1169
Query: 1157 DVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISS----KSFL 1204
DV EAL+GA + D G +A +A + AS I + S +
Sbjct: 1170 DVCEALIGAALLTPGPQHRFDMGVRAVSAV---VDSNEHNAASWRDYISLYSIPKYQEQA 1226
Query: 1205 PLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLI 1260
P + +D+ +E LG+ F + LL AF HPS+ CYQ LEFLGDA+LD +
Sbjct: 1227 PDGSEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDALLDMVC 1286
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
L+ +P P LT+ + +V+N+ +AV + L + S+ L I +Y +
Sbjct: 1287 VEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEA 1346
Query: 1321 ITPSSTREV-------KEGPRCPKV-LGDLVESSLGAILLDSGFNLNTV 1361
+S +V + P PKV L D+VE+ LGA+ +DS F V
Sbjct: 1347 QAAASQSDVAVDYWTLTQDP--PKVCLPDMVEAYLGAVFVDSNFRFEEV 1393
>gi|134084339|emb|CAK48679.1| unnamed protein product [Aspergillus niger]
Length = 1531
Score = 202 bits (513), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 285/637 (44%), Gaps = 73/637 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL ++A +N I L TG GKT IAVLL+ EL + I FL +
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ ++ V F G L S W++ + V+V +IL CL +
Sbjct: 178 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASA 232
+IKM I +LIFDE HH K +HPYA+I++D Y ++ K PRIFGMTASP+ KG
Sbjct: 238 YIKMSQINILIFDEAHH--TKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG--- 292
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY------- 285
++ LE LLD+++ + + L PV RV+ + + ++S
Sbjct: 293 --DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDR 350
Query: 286 ---VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGAL 341
+ C E + Q S L R D R L +L S++ +
Sbjct: 351 FGDMACLEGIFRFAW-QASSELGRWCSDRAWARALADDVLPKLEGSVRKTANSETSSNVP 409
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
++Y E +R E + I S +A + E F + + ++VL+
Sbjct: 410 ESAY-----KEILRI----TEASEIVKS---YAFSSPETFGQLSPK---------VQVLR 448
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ--NLKFLASWRCHFLV 459
E +L R G Q KCIVF + TA L+ + Q N+ FL R L+
Sbjct: 449 E-----ELARYFG------RQTETKCIVFTQKRYTALILAELFQTLNIPFL---RPGVLI 494
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV AG+ R S++ KFR+GE+N L AT V EEGLDI C LV+ + V
Sbjct: 495 GVRSGDLAGMNITFRQQFISLV-KFRTGEINCLFATSVAEEGLDIPDCNLVV--STCKAV 551
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
S R R+ E + + G R ++K EDR+ +
Sbjct: 552 GVRDISIQRMRVWSKEGIWSMSRGYLRS-KMLKTLP--EDRLLYGFDHDLDTVLQKDEGN 608
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAP 635
R +++ S+GA ++ ++L RY S L +++ F+ + + G +C +ILP +P
Sbjct: 609 RTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGAFVCEVILPEKSP 668
Query: 636 IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
I + G+P AK+ A L K L+D+
Sbjct: 669 IRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHF 705
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 214/500 (42%), Gaps = 83/500 (16%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
H QP+LRA+ + RNLL K+ D+E F + P LK+ S
Sbjct: 950 HWDQPVLRAELVRLRRNLLD--KMTDTERDVETRCFICIEP----LKVSAIPASTAFSCL 1003
Query: 988 LLPSIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFS 1038
P+I+ R++ L++++ L+ +F + ++ + E + + ++ R +
Sbjct: 1004 AFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGR-N 1062
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD FLK A LF + DE + R + N NL A + YIR
Sbjct: 1063 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1122
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDL-------NAEVRCSKGHHWLH 1151
+ F S+ T+ H+ Y P+ L ++ ++ H L
Sbjct: 1123 RGF----------------SRLTDAARHTWY----PEGLKLLQGKDHSRKATTESKHALA 1162
Query: 1152 KKTIADVVEALVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KS 1202
+KTIADV EAL+GA + G KA T + + E ++ I +
Sbjct: 1163 EKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQR 1222
Query: 1203 FLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDY 1258
A L ++ +E L ++F + LL AF HPS+ CYQRLEFLGD+++D
Sbjct: 1223 RAADGAELYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDM 1282
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-- 1316
+ L++ +P P LT+ + +V+N+ +AV + L + S L I Y
Sbjct: 1283 VCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAE 1342
Query: 1317 ------------VDY---------MITPSSTREVKE-GPRCPKVLGDLVESSLGAILLDS 1354
VDY ++TPS+ R +C L D+VE+ +GA+ +DS
Sbjct: 1343 EIQTAEGESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQC---LPDMVEAYVGAVFVDS 1399
Query: 1355 GFNLNTVWKIMLSFLDPILK 1374
FN + + ++ P +
Sbjct: 1400 DFNFEVIERFFRDYIKPFFE 1419
>gi|392585234|gb|EIW74574.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1534
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 201/710 (28%), Positives = 310/710 (43%), Gaps = 114/710 (16%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R YQLE+ ++ ENIIV TG GKT IA+L + H + + + +C F APTVAL
Sbjct: 32 VTRDYQLEMFTASLRENIIVAQDTGSGKTLIAIL---RMKHEVEREPRKVCWFFAPTVAL 88
Query: 118 VQQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ VI I V G + K W + ++ ++V PQ+LL L H ++
Sbjct: 89 CEQQRDVIALDIPVSVGLISGALEPNQWKDIALWRGVLQRHRIIVSTPQVLLDALRHGYV 148
Query: 176 KM-ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-------------VPRIFGMT 221
K+ E I LL+FDE HHA NHPY IMK+FY ++ P + G+T
Sbjct: 149 KLGEDIGLLVFDEAHHA--VDNHPYNCIMKEFYFRVAVREHGAASGAESREERPMVLGLT 206
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVR--VYQYGPVI 278
ASPV G N+ S+ LE LD V S L SFV P+ + +Y+ P
Sbjct: 207 ASPVYG------GNVEASMRILERNLDCIVRSPRLHRSQLISFVHRPIFKHVLYRPAPFF 260
Query: 279 ND--TSSSYVTCSEQLA--EIKREQYISALSRKL-----------HDHQSLRNTTKQLNR 323
+ T+S+ S LA +K + YI +L +L Q L T K+ +
Sbjct: 261 DKTYTASNITALSSVLATLNVKDDPYIISLRGQLAHKTPGSPDYMRTDQKLSKTIKKEDT 320
Query: 324 -----LHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQAS 378
L D + E G A + + R + E + +
Sbjct: 321 YTHRGLKDIVSTATEICFDLGRWAADWYVHKAISLARENPMPYES-----AFTSVQEKEK 375
Query: 379 EVFAAICRRDGIAS---DLSCIEVLKEPFFSKKLLRLIGIL------STFRLQQHMKCIV 429
I R ++ D + IE S KL LI L + + +V
Sbjct: 376 AYLLRILARVHVSPPSYDPAAIEA----GVSDKLCVLIDTLLAEKRGAEEEANEAYSGLV 431
Query: 430 FVNRIVTARALSYILQ-NLKFLASWRCHFLVGVNAG-----LKSMSRNAMKS----ILEK 479
FV R +L+ +L + + R +VG + L ++R M++ L
Sbjct: 432 FVTRRDAVLSLAEVLAVHPRTAGVLRVGRIVGTSESAYRKTLLDVTRALMRNTHGETLGS 491
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
FR+GE N+LVAT V EEGLDIQ CC V+R+D+P + S+ QSRGRAR +S + + +SG
Sbjct: 492 FRTGEFNVLVATSVAEEGLDIQACCNVVRWDVPNNMVSWAQSRGRARRWRSTFVLMFESG 551
Query: 540 N----------QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI----YKVDSSGA 585
N Q E +++ ++ + R+ + R + E+ + V+S+GA
Sbjct: 552 NMDAAGVERWMQLERQMVEQYNNQM-RLAGNALPRYDEEDDEDQEDDDHAVRFTVESTGA 610
Query: 586 CISAGYGVSLLHRYCSKLP------HDEFFNPKPK-----FYYFDDLGGTI-------CH 627
++ L+ +CS LP H ++ P ++ D T+ C
Sbjct: 611 LLTLQSAPPHLNHFCSVLPNSRHTAHRALYDIDPPEFPEGWHALDPRTNTLPYPGPFGCT 670
Query: 628 IILP-ANAPIHQIVGTPQ--SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ LP P+ + PQ SS +A++ KA + L+ G LN++L+P
Sbjct: 671 VTLPRVLPPLLRTFSVPQKYSSKLSARRHVSFKAYKTLYDAGLLNEHLMP 720
Score = 128 bits (322), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 183/410 (44%), Gaps = 59/410 (14%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSI+ + A L+ L P+ AE+ ++ A++ QE + +RLE LGD
Sbjct: 1003 LVPSILRYISVANTAASLRATLLTD-PQLAEIPLSLVKMAISAPVSQEPTNYQRLESLGD 1061
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
A LK VG +L+ H EG LT+RR +AV+N L K A + L +I F P +F
Sbjct: 1062 AVLKLVVGAYLYSEHPLWHEGYLTQRRDHAVSNVRLAKSAIQKKLYRWIVRDHFAPKRFM 1121
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
R + E E + D N KG L K +ADVVE+L+GA
Sbjct: 1122 PRYLTDNRGATNEEENS-----------DENGN---GKGKEDLSTKVLADVVESLIGAAY 1167
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
GF+ A + ++ I + + + + + L A +A ++ ++G+ F
Sbjct: 1168 VHGGFELAISLIRTIDVHLALSPLSASIEAAYAAADPSLEAPPQVAHVQNMIGYTFTKPL 1227
Query: 1228 LLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LL++A H S + Y+RLEFLGDAVLD LI YLY PG++T LR +
Sbjct: 1228 LLVEALTHASHQTDLRTVSYERLEFLGDAVLDMLIADYLYKHPKNFSPGEIT-LRKHAIG 1286
Query: 1286 NQAFANVA-------VDQS----------------------FYKFLIFDSNVLSE----- 1311
N F + A VD S Y+ ++ S+ L +
Sbjct: 1287 NALFLSYACLSSCTPVDASVPAPDPLRHGKITLRAKTEHIYLYQCMLHSSSALLDEQKGA 1346
Query: 1312 -----TINNYVDYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDS 1354
++ + ++ SS E R PK+L D+VES +GA+ +D+
Sbjct: 1347 FARFASVGGPLARSLSHSSVFPWAELTRLQAPKILSDIVESVIGAVYIDA 1396
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLE LGDAVL ++ +YLYS +P G LT R V+N A A+ + Y++++
Sbjct: 1053 YQRLESLGDAVLKLVVGAYLYSEHPLWHEGYLTQRRDHAVSNVRLAKSAIQKKLYRWIVR 1112
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKE------GPR--CPKVLGDLVESSLGAILLDSGF 1356
D + Y+ ++ E + G KVL D+VES +GA + GF
Sbjct: 1113 DHFAPKRFMPRYLTDNRGATNEEENSDENGNGKGKEDLSTKVLADVVESLIGAAYVHGGF 1172
Query: 1357 NL 1358
L
Sbjct: 1173 EL 1174
>gi|358397707|gb|EHK47075.1| hypothetical protein TRIATDRAFT_291296 [Trichoderma atroviride IMI
206040]
Length = 1507
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 188/653 (28%), Positives = 304/653 (46%), Gaps = 58/653 (8%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQLE+ ++++ +N+IV + TG GKT +AVL I A L R K I F+ PTV L
Sbjct: 124 SRAYQLEMLEQSLRQNVIVAMDTGSGKTQVAVLRIK--AELERCDPKKIVWFITPTVHLS 181
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ V++ I G++ L + W + + V++ PQILL L H ++K
Sbjct: 182 AQQHTVLKLQIPSVPMQMLAGNRHLPTWTQEMWTPLLAKTRVVITTPQILLDALDHAYLK 241
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASAQ 233
ME +AL++FDE H+ K +P KIM+ Y P + VP I G+TA+P + A+
Sbjct: 242 MEHLALIVFDEVHNCVGK--YPGGKIMQHHYHPCLSAGKSVPAILGLTATPSIQSEAT-- 297
Query: 234 ANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+ +LE L+DA+ S ++L V P ++ Y P ++ + + S
Sbjct: 298 -----DLVALEQLMDARCISPTLHRDELLKCVKRPSIQHKAYIPAEEYSTPTMKSLSRVY 352
Query: 293 AE--IKREQYISALSRKLHDHQSL---RNTTKQLNRLHDSMK-FCLENLGVCGALHASYI 346
++ I ++ ++ +L L + + K+ MK F ++ +C L
Sbjct: 353 SDLDINKDPFVQSLRENLTERNGRLLEKTILKEDTYTQIQMKTFKSQSQSICKQLGPWAA 412
Query: 347 LLSGDETMRNELIEAE-GNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L +++ + L +AE G+ D + + + A I RR + + L +
Sbjct: 413 DLFIWKSISSYLDKAEYGDEFFDQWYQCRDREKKYLAGIFRRVEVEPPPKAPQGLND--I 470
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVNAG 464
S K+L L+ L + Q M I+FV V + L+ IL N +R +VG ++
Sbjct: 471 SDKVLVLLEELLSIDEQSTMG-IIFVEERVMVKMLAEILSINPAIKKKYRVGTMVGSSS- 528
Query: 465 LKSMSRNAMKSI--------LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
S R + L+ FRSG++NLL+AT V EEG+D+ C LVI FD+P+T
Sbjct: 529 -YSSKRRVVYDFGDKGDLKALQNFRSGKINLLIATAVLEEGIDVPACNLVICFDVPKTSK 587
Query: 517 SFIQSRGRARMPQSEYAFLVDSGN-------QRELDLIKNFSKEEDRMNR-EIMDRTSSD 568
SFIQ RGRARM S D G+ ++E ++ + F E+ + + E+++ + S
Sbjct: 588 SFIQRRGRARMKDSRLVLFFDEGDASSKKWEEKEDEMARLFEDEQREIQQLEMIEESESL 647
Query: 569 AFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG----GT 624
C Y +GA + L +C L EF + +P + + G
Sbjct: 648 GTIC-----YTHPVTGARLDFDNAKPHLEHFCRTLSPTEFVDSRPDYIIHKEDGVGSNAL 702
Query: 625 ICHIILPANAPIHQIVGTPQS---SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
++LP P++ S S + A KDA +A L+ G LND LLP
Sbjct: 703 TATVLLPPFIPVNPRQYNSASVWRSEKNATKDAAFQAYMALNDAGLLNDNLLP 755
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 172/416 (41%), Gaps = 81/416 (19%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEILG 1046
++P+I+H L +L+A EL + + E +S L++ A+ E + ERLE LG
Sbjct: 1009 IIPTIIHELGVMLMAKEL----ATTVLEPVGISDWGLVREAICARSANEPMNYERLEFLG 1064
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK + EG L+ R ++N L + A L ++ +PF
Sbjct: 1065 DSILKLCTCIQAAVTKPDWPEGYLSYWRDRLISNVRLYQAAVDFRLPRFLVTKPF----- 1119
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
T H D L +V L KT+ADVVEAL+GA
Sbjct: 1120 -----------------TGHKWRPLYLEDVLQEDVNAPTTERRLSTKTLADVVEALIGAS 1162
Query: 1167 IDDSGFKAA----TAFLK---WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
+ G A FL W GI E + N ++ P+ + LE LL
Sbjct: 1163 YCEGGIAMAEKCIAMFLSEIDWDGIDKGREI--LFNRVPPNERLPPI-----LEPLERLL 1215
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLG------GCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
G+ F + LL +A H SF G +R+EFLGDAVLD++I + ++ V P+L
Sbjct: 1216 GYTFQRKALLTEALTHASFMADGVMDHGKRSLERMEFLGDAVLDHVIVTRIFEVRPELPH 1275
Query: 1274 GQLTDLRSMLVNNQAFANVAVD---QSFYKFLIFDSNVLSETINNYVDYMIT-------- 1322
+ L++ LVN A + ++ +S + + +V ++ + Y+ +
Sbjct: 1276 YTMHTLKTGLVNGDFLAFMTMEHGLKSMETVVTEEGSVENQETHTYLWQFMRHAANSIGI 1335
Query: 1323 ---PSSTRE----------VKEGPRCP----------KVLGDLVESSLGAILLDSG 1355
++TR ++ G P K DL E+ LGA+ +DSG
Sbjct: 1336 EQLATATRHAALRAEILDVMENGAHYPWALLAALNPKKFYSDLFEAVLGAVWVDSG 1391
>gi|17738129|ref|NP_524453.1| Dicer-1 [Drosophila melanogaster]
gi|51316117|sp|Q9VCU9.1|DCR1_DROME RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1
gi|7300916|gb|AAF56056.1| Dicer-1 [Drosophila melanogaster]
Length = 2249
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 245/537 (45%), Gaps = 112/537 (20%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1722 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1841
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1842 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1899
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1900 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1959
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1960 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 2019
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 2020 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2079
Query: 1297 SFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPKVLGDLVE 1344
F+KF S L++ I+ +V +Y + + E PK LGD+ E
Sbjct: 2080 GFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFE 2139
Query: 1345 SSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFPSL 1402
S GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 2140 SIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EPET 2190
Query: 1403 KKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 2191 AKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 2247
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 496 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 552
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 553 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 612
Query: 535 LV 536
LV
Sbjct: 613 LV 614
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 816 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 875
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 876 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 935
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 936 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 992
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 993 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 1049
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 1050 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1101
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1102 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1155
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1156 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1215
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1216 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1273
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1274 IRKQVSADLGLGRQ 1287
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ + ++L+ V
Sbjct: 18 RDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRARR-HGRVSVYLSCEVGTST 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ + + + T + + D + D Y V ++ P+ LY L R +
Sbjct: 77 EPCSI------YTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETREL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH + V Y +I + ++ IM PRI G+ A P+ G
Sbjct: 131 LLSSVELIVLEDCHDSAV-----YQRI-RPLFENHIMPAPPADRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQCAP 228
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
++E E T S+ LP S D L+GH ++LQA + N G
Sbjct: 1686 RIEIEPPTSTKAITSA--ILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GIN 1740
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1741 LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1799
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1976 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2033
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2034 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2086
>gi|195331135|ref|XP_002032258.1| GM23619 [Drosophila sechellia]
gi|194121201|gb|EDW43244.1| GM23619 [Drosophila sechellia]
Length = 2249
Score = 201 bits (511), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 249/539 (46%), Gaps = 116/539 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1722 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1841
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G DD N C+ H +
Sbjct: 1842 IKNLSSVQICEMVREKADALGLEQNGGVQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1899
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----EFEA-SQVTNICISSKS--- 1202
K+IAD VEAL+GA++ + G + A F+ W+G++V + +A +Q I S+K
Sbjct: 1900 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDAGNQEQRIPGSTKPNAE 1959
Query: 1203 ------------------FLP-LSASLD-----MATLEILLGHQFLHRGLLLQAFVHPSF 1238
F P + LD E LG++F R LLQA H S+
Sbjct: 1960 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 2019
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 2020 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2079
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPKVLGDL 1342
F+KF S L++ I+ +V I + + E PK LGD+
Sbjct: 2080 GFHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDV 2137
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFP 1400
ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 2138 FESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EP 2188
Query: 1401 SLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 2189 ETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 2247
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKS------MSRNAMK 474
+++ N+ TAR L +L +LKFL RC + A + M +
Sbjct: 496 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAEMEHRRQE 552
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 553 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 612
Query: 535 LV 536
LV
Sbjct: 613 LV 614
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 816 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 875
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 876 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 935
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 936 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 992
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 993 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 1049
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 1050 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKSPAGGKHIDWQF 1101
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1102 LE------LIQANGNTMPRAVPDEERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1155
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1156 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1215
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1216 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1273
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1274 IRKQVSADLGLGRQ 1287
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ + ++L+ V
Sbjct: 18 RDFQVELLASAYERNTIICLGHRSSKEFIALKLLQELSRRARR-HGRVSVYLSCEVGTST 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ + + + T + + D + D Y V ++ P+ Y L R +
Sbjct: 77 EPCSI------YTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFFYLLETRDL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ I L++ ++CH + V Y +I + ++ IM PRI G+ A P+ G
Sbjct: 131 LLSSIELIVLEDCHDSAV-----YQRI-RPLFENHIMTAPPADRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLATLEQSVLCRIETASDIVTVLRYCSRPHEYIVQCAP 228
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1699 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1755
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1756 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1799
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1976 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2033
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2034 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2086
>gi|340712553|ref|XP_003394821.1| PREDICTED: endoribonuclease Dicer-like [Bombus terrestris]
Length = 1488
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 310/664 (46%), Gaps = 80/664 (12%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPT 114
I R YQ++L + A +EN+I+YL TG GKT IAV+LI EL+ IR+P IF+ T
Sbjct: 9 IPRPYQIDLFEIACKENVIIYLPTGAGKTFIAVMLIKELSADIRRPYAEGGKHTIFIVNT 68
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ+ I+ G T H + W + ++ +EVLVM QIL+ L H
Sbjct: 69 VPLVIQQSDYIKRLTGLSCGTLSSEEGVDFWHDEEWNEHLNNHEVLVMTSQILVNALCHG 128
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
++ + I L+IFDECH A ++HP +IM+ F + PR+ G++AS + A+ +
Sbjct: 129 YMFLNRINLIIFDECHRA--VNDHPMRQIMQLFENCPKEEQPRVLGLSASLL---NANVR 183
Query: 234 ANLPKSI-NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+S+ SLE +A++ + A+ +S+ +SP+ + Q+ + D + + +
Sbjct: 184 LEKVQSVMQSLEVTFNARIATATVAD--KSYYASPIEEIIQFDQHVIDNVGECI--NNII 239
Query: 293 AEIKREQYISALSRKLHDHQSL-----RNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
E++ + L L ++S + +K+L+ + ++++ G+ GA +
Sbjct: 240 KEVESILNCAVLKDNLKYNESSAEFRPKTISKKLSCILRNIQYHFLRTGIYGASKCVLLH 299
Query: 348 LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF-- 405
L E ++ +IDD + + CR+ + D KE +
Sbjct: 300 LIQLEYLKK--------SIDDVETLYILEYLITKVINCRK--LLEDKMKGSPEKERIYNY 349
Query: 406 -SKKLLRLIGILSTFRLQQHMK----CIVFVNRIVTARALSYILQNL-------KFLASW 453
S ++ +L +L F +H CI+FV R TA+ L IL+++ KFL
Sbjct: 350 SSDQIQKLFKVLKDFYNNKHSDQVFCCIIFVQRRFTAKILYQILKSVSIYDEECKFLHP- 408
Query: 454 RCHFLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
F++GV++ S+ + K +L +FR+G LN +VAT V +EG+D+ C L+I
Sbjct: 409 --EFVIGVSSNPFRNSKELLCVSERNKEVLLRFRNGSLNCIVATDVIDEGIDVPKCSLII 466
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS 567
R+DLP V ++IQS+GRAR S Y L+ S + + L + K E + + ++D+T
Sbjct: 467 RYDLPMDVRTYIQSKGRARHAYSRYVVLLQSDDSQYLRRHNEYKKIEQHLKQLLVDKTDE 526
Query: 568 DAFTCSEE-------------RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPK 614
E ++ D CI+ +S++++YC+ L +F P
Sbjct: 527 RNLPTENEIQSELYQHDIEPYQVISDDGQICCITEQMAISIINQYCTSLLKSKFACLSPI 586
Query: 615 FYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ I + P++Q + +K I LH L A Y +P
Sbjct: 587 W---------TLRKISENHVPMYQFPSALYGAFPLPRK------ITYLHILHATPKYPVP 631
Query: 675 QEDN 678
DN
Sbjct: 632 HHDN 635
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 209/445 (46%), Gaps = 65/445 (14%)
Query: 1001 VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
+ + + H+LS G + ++ ALT + + F+LERLE LGD++LK+ L+
Sbjct: 991 IPVPVLHILSLKCSYGPDPG--QIVYALT-KTGHDAFNLERLETLGDSYLKFITSLFLYN 1047
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF-----ALGRRC-- 1113
EG LT + + N NL + N+ ++ F P F + R+
Sbjct: 1048 EFPKHSEGYLTALKGKIIGNRNLYYCGIKKNIPGCMKVDSFIPLSNFIAPAYTVYRQVQD 1107
Query: 1114 -----------------PR---ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHW---- 1149
PR +C +E T + + D AE + H+
Sbjct: 1108 VLLYAKVSPNVLYEIEIPRDEQLCGNISEAT-KNAIQAKILDWEAAEAQTGMEHYLGIQT 1166
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI--------QVEFEASQVTNICISSK 1201
+ KT+AD VEAL+G ++ G K L+W I ++ F Q I +
Sbjct: 1167 VSDKTVADCVEALIGVYLRSMGIKDTLILLQWFQILPHKIDANELLFGTPQNPIISEGNV 1226
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYL 1259
+ L AS +E LG+QF +RG LLQAF HPS+ N + CYQRLEFLGDA+LD+L
Sbjct: 1227 NHLMPWAS----NIETKLGYQFNNRGYLLQAFTHPSYTPNNMTECYQRLEFLGDAILDFL 1282
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-- 1317
IT+Y+Y L PG LTDLRS LVNN FA + V + L+ + L+ I +V
Sbjct: 1283 ITNYIYESCGNLNPGALTDLRSALVNNITFACLTVRHGLHIALLSYAPKLNNVIERFVKF 1342
Query: 1318 ----DYMITPSSTREVKEGPRC--------PKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
+Y + + E C PKVLGD+ ES +GAI LDS NL+ VW I+
Sbjct: 1343 QEERNYAVNDELLWILLEEDECNMAEHVDVPKVLGDIFESVIGAIYLDSNKNLSVVWNIV 1402
Query: 1366 LSFL-DPILKFS-NLQLNPIRELLE 1388
S + I +FS N+ PIR L E
Sbjct: 1403 YSIMHKEIDEFSKNIPKQPIRVLYE 1427
Score = 40.4 bits (93), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 875 SDVENSLVYATHKKW-FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPL 933
SD E +LV ++ Y+VT + + S + S+++ + + + + + +QP+
Sbjct: 760 SDYELALVKPNYRAADTYIVTQVCDDITPSSCFPTDHFSTYIHYYKEKHRLEINNLEQPM 819
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIM 993
L K + R + + R D + +E+ L PELC I F + LPSI+
Sbjct: 820 LEVKSISRAIDYIMPR---DKSTESKKEH---LVPELCIR--INFPALYWLKATTLPSIL 871
Query: 994 HRLENLLVAIELKHLLS 1010
HR+ LL+A +L+++++
Sbjct: 872 HRVSQLLIAEDLRYVIA 888
>gi|383856609|ref|XP_003703800.1| PREDICTED: endoribonuclease Dicer-like [Megachile rotundata]
Length = 1441
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 283/588 (48%), Gaps = 51/588 (8%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ---KSICIFLAPT 114
IAR YQ++L + A+ +N IVYL TG GKT IAV LI EL+ IR+P K IF+ T
Sbjct: 9 IARTYQVDLLEVALRQNTIVYLPTGAGKTFIAVKLIEELSADIRRPYNEGKKHTIFVVNT 68
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ++ I G G +W +++++Y+VLVM QIL+ L H
Sbjct: 69 VPLVVQQSEYIGRLTGLLCSPLSGDCNVDFWKDQEWNQQLEKYQVLVMTAQILVDALSHG 128
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
+I + I L+IFDECH A ++HP +IM+ F + + P++ ++AS + ++
Sbjct: 129 YIYLRNINLIIFDECHRA--VNDHPMRQIMQFFERCSNNEQPKVLALSASLLNSNVKLSK 186
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYG-PVINDTSSSYVTCSEQL 292
+ I SLE AKV +V E L+++ P + +Y VI+D + +
Sbjct: 187 VD--SMIKSLEITFQAKVATVNSFEQLQNYYPVPQQVIVEYDLNVISDVENRVRAIISET 244
Query: 293 AEIKREQYISALSRKLHDHQSLR--NTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
+I + ++ + + + + R + TK+L + ++ N G+ GA ++ + L
Sbjct: 245 CDILNKLLLNTMMKNIESDEVFRPKSVTKKLMSIMVDIQNQFSNAGIYGASKSALLHLIQ 304
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
E ++ E + + L ++ +V D + + ++ K + S +
Sbjct: 305 LECLKKNADELNTIHVLEYLITEVTKCRKVL-----EDEMKGNTELEKIYK--YSSDQTR 357
Query: 411 RLIGILSTFRLQ----QHMKCIVFVNRIVTARALSYILQNL-------KFLASWRCHFLV 459
+L +L F + Q CI+FV + T L +L+NL KFL + F+V
Sbjct: 358 KLFSLLKEFYNKRSEGQQFCCIIFVQQRFTVNVLYQVLKNLAEHDEEYKFL---KPEFMV 414
Query: 460 GVNAG-----LKSMS-RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
G + ++S+ K+ L +F++G N ++AT V +EG+DI TC LVIRF+LP
Sbjct: 415 GFSNNPYKNCIESLCIAKCNKAALLRFKNGLSNCIIATDVIDEGIDIPTCTLVIRFNLPM 474
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS 573
V ++IQS+GRAR S Y LV G+ L + F E + + ++ +
Sbjct: 475 DVRAYIQSKGRARFASSHYVLLVPKGDIDYLKRYEQFQMVEKYLQQLLVSENNVRTKPTE 534
Query: 574 EE---RIYK--------VDSSGA--CISAGYGVSLLHRYCSKLPHDEF 608
E +YK D +G ++ ++L++RYC L +F
Sbjct: 535 NEIKNVLYKYNIEPYAVTDENGITYTVTEQSAIALINRYCVSLLKSKF 582
Score = 197 bits (500), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 214/421 (50%), Gaps = 61/421 (14%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
++ ALT++ + F LERLE LGD++LK+ V +L+ + +EG LT + + N NL
Sbjct: 1017 VMYALTSKMGLDAFDLERLETLGDSYLKFIVSLYLYTIFPNYNEGSLTVLKGKMIGNRNL 1076
Query: 1084 LKLAARNNLQVYIR-DQPFDPCQFFALGRRCPRICSK-------------ETERTIHSQY 1129
+ N+ ++ D F A R K E + H Q+
Sbjct: 1077 YYCGIKKNIPGRMKVDDFIASSNFIAPAYTVFRQLQKQLLEKKVSPNVLYEIQIPKHEQF 1136
Query: 1130 DGRAPDD---------LNAEVRCSKG--HHWLH-----KKTIADVVEALVGAFIDDSGFK 1173
+G ++ LN E S+ H+L KT+AD VEAL+G ++++ G K
Sbjct: 1137 NGSISEETGIKIQEKVLNWETAESQTGMEHYLGIQTVPDKTVADCVEALIGVYLENLGIK 1196
Query: 1174 AATAFLKWIGI-QVEFEASQV-----TNICISSK--SFLPLSASLDMATLEILLGHQFLH 1225
A LKW I E +A ++ NI + F+P ++ + E LG++F +
Sbjct: 1197 NAITLLKWFQILPNETDAHRLLHDISENIVVDENINRFMPWASDI-----ETKLGYRFEN 1251
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
R LLLQAF HPS+ N + CYQRLEFLGDA+LD+LIT Y+Y L PG LTDLRS L
Sbjct: 1252 RALLLQAFTHPSYTANNVTECYQRLEFLGDAILDFLITCYIYENCGNLTPGALTDLRSAL 1311
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITPSSTREVKEGPRC-- 1335
VNN FA ++V + L+ + L++ I+ +V D+++ + E C
Sbjct: 1312 VNNITFACLSVRYGLHTALLAYAPNLNDVIHRFVKFQEERDHIVNDELLWILLEEDECNM 1371
Query: 1336 ------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELL 1387
PKVLGDL ES +GAI LDSG NL W+I+ SF+ I +FS N+ P+R L
Sbjct: 1372 AEHVDVPKVLGDLYESVIGAIYLDSGKNLRKTWEIIYSFMHKEIDEFSKNIPKQPVRVLY 1431
Query: 1388 E 1388
E
Sbjct: 1432 E 1432
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 27/203 (13%)
Query: 815 SSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE 874
S+ +L++PV ++W++I+ SV+R +P P + N
Sbjct: 716 SNRDNCFLVVPVD-ENEKINWEVIKE----------HNSVER--IPPSIPFRFKN----- 757
Query: 875 SDVENSLVYATHKKW--FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQP 932
SD E +LV T++ Y+VT I + S + + S+ + +G+ + KQP
Sbjct: 758 SDYELALVIPTYRPSPDVYIVTQICEDLTPNSCFPTDNFFSYAHYYKEKHGLIINDLKQP 817
Query: 933 LLRAKPLFRLRNLLHNRKLE-DSESHELEEYFDD----LPPELCQLKIIGFSKDIGSSLS 987
+L K + R N + R+++ +S+ ++ + + D L PELC I F +
Sbjct: 818 MLEVKAISRKINYIKPRRMQNNSKKRKIADVYKDFKEHLVPELCIR--ITFPALYWLKTT 875
Query: 988 LLPSIMHRLENLLVAIELKHLLS 1010
LLPSI+HR+ LL+A +L+ ++
Sbjct: 876 LLPSILHRVSQLLIAEDLRSTIA 898
>gi|195572986|ref|XP_002104476.1| Dicer-1 [Drosophila simulans]
gi|194200403|gb|EDX13979.1| Dicer-1 [Drosophila simulans]
Length = 1533
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 244/539 (45%), Gaps = 116/539 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1006 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1065
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1066 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1125
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1126 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1183
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1184 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1243
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1244 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1303
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1304 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 1363
Query: 1297 SFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPKVLGDL 1342
F+KF S L++ I+ +V I + + E PK LGD+
Sbjct: 1364 GFHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDV 1421
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFP 1400
ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 1422 FESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EP 1472
Query: 1401 SLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 1473 ETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 1531
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 100 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 159
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LHK+G L+D L P EDE
Sbjct: 160 DIVGLPMPTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 219
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 220 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 276
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 277 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 333
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI---FHKNSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 334 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 385
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 386 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 439
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 440 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 499
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 500 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 557
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 558 IRKQVSADLGLGRQ 571
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 983 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1039
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
IT+YLY Y + G+L+ LRS V N
Sbjct: 1040 ITTYLYITYENVHEGKLSHLRSKQVAN 1066
Score = 45.8 bits (107), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1260 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1317
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1318 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 1370
>gi|332020119|gb|EGI60563.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1979
Score = 200 bits (509), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 228/474 (48%), Gaps = 105/474 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1442 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1501
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFF---------------ALGRRC--PR 1115
N NL +L + L + + +P D PC + AL + P
Sbjct: 1502 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSALWNQADIPT 1561
Query: 1116 ICS----------KETERTI---HSQYD---GRAPDDLNAEVRCSKGH-----HWLHKKT 1154
+ + KETE + S+ D R ++L+ +RC + H + K+
Sbjct: 1562 LQAMNPTEITQLVKETEEKLVIMKSELDKNESRLSNNLD-NLRCFIPYNLITQHSIPDKS 1620
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQV---------------------------- 1186
IAD VEAL+GA++ G + A F+ W+GI V
Sbjct: 1621 IADCVEALIGAYLIACGPRGALLFMTWLGIHVLPTEEICVISENEPKERIPGSTPYIKGV 1680
Query: 1187 -EFEASQVTNICISSKS--------FLP-----LSASLD-MATLEILLGHQFLHRGLLLQ 1231
E+ + T IC ++P L LD LE +G++F LLQ
Sbjct: 1681 NEYRETTWTQICYGKLEEPQNPLLRYIPDPESELYMMLDGYEELEKSIGYKFRDSSYLLQ 1740
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
AF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN F
Sbjct: 1741 AFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNNTIF 1800
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPK 1337
A++AV F+K+ S LS IN +V +Y + E E PK
Sbjct: 1801 ASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPK 1860
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
LGD+ ES GAI LDSG +L+ VW + + + I +FS N+ +PIRELLEL
Sbjct: 1861 ALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLEL 1914
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 155/660 (23%), Positives = 267/660 (40%), Gaps = 107/660 (16%)
Query: 428 IVFVNRIVTARALSYIL-------QNLKFLASW----RCHFLVGVNAGLKSMSRNAMKSI 476
++FV++ TA+ L Y+L ++L FL+ R VG + L+ M + +
Sbjct: 446 VIFVDKGFTAKILFYLLSEICKHDEDLHFLSPLYTIERNTDDVGYSRDLE-MGHRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L++FR E NLL+AT + EEG+DI C V+R+D P+ S+IQ + RAR + + LV
Sbjct: 505 LKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYIQCKSRARAMDALHVLLV 564
Query: 537 DSGNQRELDL-IKNFSKEEDRM-----NREIM--DRTSSDAFTCSEERIYKVDSSGAC-I 587
+E + + E + N+E+ + +D + +D A +
Sbjct: 565 PQEASKEFIWQLAQYQYIEKTLLLKCSNKELTEDEENEADMYAAMIPHYKPLDGDDAPKV 624
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYY----FDDLGGTICHIILPANAPIHQIVGT- 642
+ +SL++RYC+KLP D F P++ D+ IC + LP N+P+ ++ +
Sbjct: 625 TFNSAISLVNRYCAKLPSDTFTRLTPEWRIETVNIHDIMMYICFLRLPINSPLKYVITSY 684
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP---------QEDNATEDEPMLFSSD-SD 692
P + A++ A L+ DLH+ ++D LLP ED P +D S+
Sbjct: 685 PMPNRAMARRMAALQMCIDLHRENEIDDNLLPIGKENFKAKPEDAEVPALPDESRADFSE 744
Query: 693 SYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPAD----RIYRE-- 743
+ G R + + L R Y +N +P+ + RIY
Sbjct: 745 ARPGTTKRRQYYYKKTAEALTDCRPIVGVPSYLYHINMVLSCPLPEEQNTRGRRIYPPEE 804
Query: 744 ----FGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFL 791
FG+ +P + + V L L++ ++ + I + F
Sbjct: 805 SAIGFGILTLKEIPKLCPFPIYTRSGEVHVQLKLSKKTVILDEF---QIERVDTFLNYTF 861
Query: 792 KVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN------SVDWKIIRRCLSSP 845
+L ++ F P ++S Y+++PV SVDW + C+
Sbjct: 862 TNVLRLQKYLMLFDP--------NASENSYIIVPVKIFATCEGSDISVDWNFL-ECIYQN 912
Query: 846 VFGTPGG--SVDRKSLPSHGPLQLHNG----WSSESDVENSLVYATHKKWFYLVTNIVFE 899
P DRK+ P + ++ W D ++FY V I
Sbjct: 913 RNAVPTKIPEEDRKNF-KFDPSKYYDAVIMPWYRSQD---------QPQYFY-VAEICTN 961
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK----- 950
N S + D S+ ++ YGI +++ +Q LL N L NRK
Sbjct: 962 LNPKSSFPGHDYSTFEEYYYKKYGIQIQNLEQSLLDVDHTSARLNFLTPRYVNRKGVALP 1021
Query: 951 --LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
E+++ + E E L ELC I F + LP I++R+ LL+A +++
Sbjct: 1022 TSSEETKRAKRENLEQKQILVAELC--AIHPFPASLWRQAVCLPCILYRINALLLANQIR 1079
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L GH L+LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1435 LKGHSGPSPSLILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLS 1493
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1494 HLRSKQVSN 1502
>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
Length = 1399
Score = 200 bits (508), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 322/669 (48%), Gaps = 70/669 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++M+ NII + TG GKTHIA+ + R P K I FLAPTV L +
Sbjct: 12 RSYQAEMVEESMQSNIICVMDTGSGKTHIAIDRTRAELEICR-PDK-IVWFLAPTVTLCE 69
Query: 120 QQAKVIEESI-GFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ V + ++ G+ ++ G L D W+ + +++ Q+LL L H F+
Sbjct: 70 QQFAVFKSNLPGYGIQ-LLSGKDNLDHWTDQGVWDDVLLNIRIVLSTHQVLLDALSHGFV 128
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASPVVGKGASAQA 234
KM ++LLIFDE HH +K HP +IM DFYKP I ++PRI G++ASP+ +++
Sbjct: 129 KMRNLSLLIFDEAHHCSLK--HPAHRIMSDFYKPRIGTELPRILGLSASPIKTAKVTSE- 185
Query: 235 NLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDTSS---SYVTCSE 290
+ +E L A V + + +L +V P + Y D S S++ +
Sbjct: 186 ----DLQQIERNLCATVKTPKLHRSELLRYVHRPHLMRIDYPVEPQDLQSNMLSFLKSAY 241
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK-FCLENLGVCGALHASYI--- 346
+++++ ++S L L Q + TK ++++ K +C + L AL A +
Sbjct: 242 TNYDLQKDPWVSEL---LQQRQQGHDVTKNIHKVFIGGKTYCRDQLRSL-ALKAEAMSQE 297
Query: 347 --------LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
L G T ++++ + + D E+ + D + D+ +
Sbjct: 298 LGMSVMDWYLRGCITQFSKMVHMSDSQLLDWSADEKRHLLEILRTLPSIDLNSHDIPPMS 357
Query: 399 VLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYIL----QNLKFLASW 453
+ S KL LI L + + C+VFV + V ++ +L + L
Sbjct: 358 LGS---MSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACIAEVLAIHPETRDLL--- 411
Query: 454 RCHFLVGVN------AGLKSMS--RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
R VG + A + S+S RN ++ LE FR+G+LNL++AT V EEG+D+ +C L
Sbjct: 412 RVGTFVGESENSKRKANIASISEPRN-QQATLENFRAGKLNLILATSVLEEGIDVSSCHL 470
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMN------ 558
V+ F+ P+ + SF+Q RGRAR +S+Y F+ +G +R+ + ++ E+ M
Sbjct: 471 VVCFESPKNLKSFVQRRGRARKEESKYVIFVPQAGRRRDPE---SWQSLEEGMKAAYLDD 527
Query: 559 -REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
R++ T + + + R ++V S+GA ++ LH +CS L + + +P+F +
Sbjct: 528 LRQVKLATEKEQQSETGHRNFEVKSTGALLTLDNASQHLHHFCSILGAGPYIDNRPQFEF 587
Query: 618 FDDLGGTI-CHIILP--ANAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLL 673
+ G I +ILP + + + E AK+DA +A + L+ G +ND LL
Sbjct: 588 TEIRPGVITARVILPLTVDPEVRTACALDTWATEKMAKQDAAFEAYKALYVAGLVNDNLL 647
Query: 674 PQEDNATED 682
P A ++
Sbjct: 648 PARQEADDE 656
Score = 107 bits (266), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 218/527 (41%), Gaps = 117/527 (22%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL-KALTTEKCQERFSLERLEILG 1046
LLPSI+HR ++A L+ L P + + +LL +AL + + +RLE LG
Sbjct: 896 LLPSILHRFGMAIIAETLRTTLLG--PVALDSAHSLLLTRALKSSAADGNDNYQRLEFLG 953
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D LK+ HL + E LT ++ V+N L + L ++ + F ++
Sbjct: 954 DCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMITKSFTGAKW 1013
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR Y G + V+ + K IAD++E+L+GA
Sbjct: 1014 ------APR-------------YAGDLLAETGPAVKEERS-----SKLIADIIESLIGAC 1049
Query: 1167 IDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
GF+ A ++ WI + A+ + + +++ L + + LE L+
Sbjct: 1050 YTVGGFEKAVLCVQTLLPLEPWISVPA---ANSILHEAAPAEADL-----MGLDVLETLI 1101
Query: 1220 GHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LLL+A H SF+ + Y+RLEFLGDAVLDY+I+ L++ P+L ++
Sbjct: 1102 GYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPELSHQKMH 1161
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRC-- 1335
+R+ VN SF F +F++ + ETIN M S R + + R
Sbjct: 1162 AIRTATVN----------ASFLAFRLFETTIDEETINK--TSMRPESQKRAIWQFLRSGS 1209
Query: 1336 -----------------------------------------PKVLGDLVESSLGAILLDS 1354
PK L D+VES +GA+ +DS
Sbjct: 1210 PSLNANRDNALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 1269
Query: 1355 GFNLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSL------K 1403
++ T I +L LD IL L+P L L + D +Q+ +
Sbjct: 1270 LGDILTCEAIVRRLGILDCLDHILCNGVDCLHPKERLGHL--AVDKGVQYARVGMNTEPN 1327
Query: 1404 KGGK-FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
+G K + + KV G+D + A L R A +A+ + L++
Sbjct: 1328 EGDKMYKCQVKVGGED----VGDVAEGLKRLNAETVAAWKAVGVLES 1370
>gi|15150411|gb|AAK84929.1| SD01621p [Drosophila melanogaster]
Length = 865
Score = 200 bits (508), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 250/537 (46%), Gaps = 112/537 (20%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 338 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 397
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 398 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 457
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 458 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 515
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----EFEA-SQVTNICISSKS--- 1202
K+IAD VEAL+GA++ + G + A F+ W+G++V + + +Q I S+K
Sbjct: 516 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 575
Query: 1203 ------------------FLP-LSASLD-----MATLEILLGHQFLHRGLLLQAFVHPSF 1238
F P + LD E LG++F R LLQA H S+
Sbjct: 576 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 635
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 636 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 695
Query: 1297 SFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPKVLGDLVE 1344
F+KF S L++ I+ +V +Y + + E PK LGD+ E
Sbjct: 696 GFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFE 755
Query: 1345 SSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFPSL 1402
S GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 756 SIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE---------PET 806
Query: 1403 KKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 807 AKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 863
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
++E E T S+ LP S D L+GH ++LQA + N G
Sbjct: 302 RIEIEPPTSTKAITSA--ILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GIN 356
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
+RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N
Sbjct: 357 LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVAN 398
Score = 45.8 bits (107), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 592 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 649
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 650 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 702
>gi|307198394|gb|EFN79336.1| Endoribonuclease dcr-1 [Harpegnathos saltator]
Length = 1479
Score = 200 bits (508), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 211/420 (50%), Gaps = 58/420 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALTT+ C + F+LERLE LGD++LK+ L+ + EG+LT + + N NL
Sbjct: 1054 ILQALTTKMCHDMFNLERLETLGDSYLKFITSLFLYHTFPMLSEGQLTAIKGRIIGNRNL 1113
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQ-------YDGRAPDD 1136
+ ++ F P F + + ++T+ Q Y+ PD+
Sbjct: 1114 YYNGVNKGIPGRLKIDEFAPMSTFIVPAYT---VFRPLQKTLLDQDVSSNILYELPVPDE 1170
Query: 1137 --LNAEVRCSKGH-------------------HWLH-----KKTIADVVEALVGAFIDDS 1170
L ++ S + H+L+ K I+D +EAL+G ++ ++
Sbjct: 1171 ERLTGDISASTSNTIQNTISQWSLAEIQTGMEHYLNIQIISDKAISDSIEALIGVYLRNT 1230
Query: 1171 GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMA----TLEILLGHQFLHR 1226
G A LKW GI + + ++ N SS + + + ++E LG++F +R
Sbjct: 1231 GISGAAKLLKWFGILPDIKIDELLNGTNSSNPIIGIGNPNEHMPWADSIEKRLGYKFNNR 1290
Query: 1227 GLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LLQAF HPS+ NR+ CYQRLEFLGDAVLD+LIT ++Y L PG LTDLRS LV
Sbjct: 1291 AYLLQAFTHPSYSVNRITDCYQRLEFLGDAVLDFLITCHIYEFCGNLSPGALTDLRSALV 1350
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITPSSTREVKEGPRC--- 1335
NN FA +AV + L+ + L E IN +V +Y I + E C
Sbjct: 1351 NNITFACLAVRYGLHTCLLAYAPQLHEMINRFVKFQEDRNYAINDELLWVLLEEEDCNIA 1410
Query: 1336 -----PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
PKVLGDL E+ +GAI LDS NL VW+++ SF+ I +FS N+ NP+R + E
Sbjct: 1411 EYIDVPKVLGDLFETLIGAIYLDSNRNLAKVWEMVYSFMHKEIDEFSRNVPKNPVRVIYE 1470
Score = 190 bits (482), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 169/631 (26%), Positives = 282/631 (44%), Gaps = 97/631 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
R YQ++L +KA+E NIIVYL TG GKT+IAV+L+ + + I+ IF+ TVA
Sbjct: 11 RAYQIDLYEKAVENNIIVYLPTGAGKTYIAVMLLKKFSGEIQMSYSKNGKRSIFIVNTVA 70
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC----DWEKEIDQYEVLVMIPQILLYCLYH 172
LV+QQ I + + G +K C W E+D +VLVM QI + + H
Sbjct: 71 LVRQQTDYIRRHTCLTCKGYSGD---MKVDCWKEDQWILELDANQVLVMTAQIFVDTITH 127
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
+IK++ I L++FDECH A +NHP +IM+ F K + PRI M+A+ + S
Sbjct: 128 GYIKLDRINLIMFDECHRAV--NNHPMRQIMQLFEKYCKKQQPRILAMSATLLNANIKSD 185
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---------------- 276
+ + +I LE AKV +V+ + ++ + ++P + +Y
Sbjct: 186 K--IESTIKDLEVTFQAKVATVKSTDCIQEYCTNPKENIIKYDTYVAATVAVDVNQIIDD 243
Query: 277 -------VINDTSSSYVTCSEQLAEIKREQYISALSRKLHD-------HQSLRNTTKQLN 322
+I DT ++ S K+ ++ + + + + ++ L
Sbjct: 244 SISILKNIIFDTDKLFMDSSPHFQPRKKSTKLTGIMKDILTTTIQAGIYAGNKSVLLHLI 303
Query: 323 RLHDSMKFC-----------LENLGVC----GALHASYILLSGDETMRNELIEAEGNTID 367
+L K+C L C LH ++L+ R +I + N I
Sbjct: 304 QLEYLKKYCDNIVSRIFLEILIKTLFCMVHSKVLHVIFVLIKN----RVLIIFQQTNIIL 359
Query: 368 DSLCRFASQASEVFAAICRRDGIASDLSCIEVLK-EPFFSKKLLRLIGILSTFR----LQ 422
+ L + ++F R C E+ + F S ++ +L +L F +
Sbjct: 360 EYLITQLVRIRKLFDDAMR--------GCTELERIYKFSSDQMYKLFTLLKDFNANKLID 411
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL-----VGVNAGLKSMSRNAM---- 473
Q CI+FV + L +IL+ L + + HFL VG + +R +
Sbjct: 412 QKFCCIIFVKERFMTQVLYHILKTLS-MHDDQYHFLLPDFIVGCHNSPYKNTREVLCLAK 470
Query: 474 --KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
K ++++FR G N +VAT V +EG+D+ C LV+R+DLP +++QS+GRAR S
Sbjct: 471 WQKEVMQRFRKGLSNCIVATDVVDEGIDVPLCALVVRYDLPTDYRAYVQSKGRARHGTSH 530
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIM---------DRTSSDAFTCSEERIYKVDS 582
Y LV ++ L K+F E +M ++ D+ + E Y V +
Sbjct: 531 YTVLVPRDDETFLSRYKDFKITELKMKTILIGNEVRSLPTDKEIENGLYQHEILPYTVSA 590
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
+G ++ VS+L+RYC+ L +F P
Sbjct: 591 AGIVLTENNVVSILNRYCNSLLRCKFVTLIP 621
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 875 SDVENSLVYATHKKW--FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQP 932
SD E +LV +++ Y+VT + + S + D ++ + +GI +++ KQP
Sbjct: 792 SDYEVTLVNPSYRTSPSVYIVTQVCDDLTPTSLFPTDDFETYTHYYEEKHGIKIQNLKQP 851
Query: 933 LLRAKPLFRLRNLLHNRKLEDSESHE-----LEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
LL K + N + R ++ S LE++ + L PELC ++I F S
Sbjct: 852 LLEVKAISTKINCIKPRSMKPGLSKRRRADVLEDFEEHLIPELC--RMICFPALYWLKAS 909
Query: 988 LLPSIMHRLENLLVAIELKHLLS-------ASFPEGAEVSAEMLLKALTTEKCQE 1035
LPSI+HR+ +LL+A +L+ + + P G+E A +++ E+ E
Sbjct: 910 TLPSILHRITHLLIAEDLRETIVRETNLGILALPSGSEWPALDMIEKEIVEQSTE 964
>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
Length = 1416
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 186/673 (27%), Positives = 304/673 (45%), Gaps = 79/673 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ++L ++A +EN IV L TG GKT IA LL+ EL + + FL
Sbjct: 3 REYQVDLYERAKQENTIVVLDTGSGKTLIAALLMRHILQRELQYRADGHKHQYAFFLVEK 62
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
VAL QQ V+ ++ F + F G + +++ W+K+ ++ V QILL L
Sbjct: 63 VALCFQQHAVLTCNLEFPIGKFYGEMTGIIRTQEYWDKQFAEHMAFVCTAQILLDLLACG 122
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
FI M I L++FDE HHA K +HPYA+I+KD Y + PRI GMTASPV +
Sbjct: 123 FISMSQINLIVFDEAHHA--KKSHPYARIIKDHYLRAGNERPRILGMTASPV----DALT 176
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
++ + LE++L +K+ ++ D + S V V ++ + D +S +
Sbjct: 177 RDVRYAAAELESMLCSKIATITDDAMMASQAHRNQVEVKEFYDRLEDPENSKTRLWGII- 235
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS--YILLSGD 351
Q +R + ++F G A + LL+ D
Sbjct: 236 -----------------FQHVRGNPQ----FKGHLEFAANASSTLGTWCADRYWKLLTTD 274
Query: 352 ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK-EPFFSKKLL 410
E+I+ E T DS + + E AA+ R D + ++ P S K+
Sbjct: 275 A----EMIKLEARTGRDSFDVDVTASDEAMAAVRRAREEIRDYNLGPIVSGSPELSSKVK 330
Query: 411 RLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNL-----KFLASWRCHFLVGVNAG 464
L +L F +Q +CIVFV AR+ ++IL +L + +++G +
Sbjct: 331 LLHEVLEDAFCKRQTKRCIVFVQ----ARSTAFILADLFQQPGMLIPGMTVGYMIGSQST 386
Query: 465 LKS---MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
S MS L+KFR GE N L AT V EEG+D+ C +++RFDL + +IQS
Sbjct: 387 SSSAAYMSYREQIVSLQKFRYGETNCLFATSVAEEGIDVPECDVIVRFDLYSSAIQYIQS 446
Query: 522 RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM---------NREIMDRTSSDAFTC 572
+GRAR S Y +++ GN + ++ ++ + +R++ D +
Sbjct: 447 KGRARQKSSLYISMMEEGNLDHMRKLRRAVRDAHALRQFCSALPEDRKVQDFVITPELLV 506
Query: 573 SEE----RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT-ICH 627
S E + + + +GA ++ + +L ++ S P++ P Y + +G I
Sbjct: 507 SHEQATQKTFAIAETGAQLTFITSLDVLAKFASSFPNEAEDGIMPLEYIVNTVGKKFIAR 566
Query: 628 IILPANAPIHQIVGTPQSSMEAAK----KDACLKAIEDLHKLGALNDYL---LPQEDNAT 680
++LP +PI I G Q S + A+ +AC++ I+ + G L LP+ NA
Sbjct: 567 VVLPEGSPIKTITGEAQQSKQLARCSAAFEACVRLIQKKYITGNLQPAFAKKLPEMRNAR 626
Query: 681 EDEPMLFSSDSDS 693
+ SSD S
Sbjct: 627 ----LALSSDKKS 635
Score = 128 bits (322), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 184/431 (42%), Gaps = 78/431 (18%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT-----TEKCQER------ 1036
+LP +M+R++++L+A E L+ G + +++ L+A+T TE+ E
Sbjct: 907 VLPVVMYRVDSVLIAQEACSLV------GLTIRSDLALEAVTKDSFNTEEHGEHQVDFQP 960
Query: 1037 ---FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
+ ERLE LGD FLK A +F L T DE E R + N NL K A +
Sbjct: 961 GMGRNYERLEFLGDTFLKMATTISVFTLFPTADEFEYHVTRMVMLCNQNLFKHAVEKGMP 1020
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKK 1153
YIR + FD ++ R + +TE H L K
Sbjct: 1021 AYIRTKAFDRRTWYPSNMTLKRGKAAKTE-----------------------SKHCLSHK 1057
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL------- 1206
+IADV EAL+GA S +K + V + + S K +
Sbjct: 1058 SIADVCEALIGAAYMSSSPGDMDMAVKAVAAMV----CSINHTMTSYKDYFATFTAPKWY 1113
Query: 1207 ------SASLDMATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLD 1257
+ L + + + G++F L AF HPS+ N + YQRLEFLGD +LD
Sbjct: 1114 SQQATAAQRLTVDKVAEITGYRFKAAPLARSAFRHPSYVFENNIRD-YQRLEFLGDGLLD 1172
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
I +L+ +P+ P LT+ ++ +V+NQ + V +K ++ ++ L I Y
Sbjct: 1173 MAIVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSSLLGDIGRYA 1232
Query: 1318 DYMITPSST-----REVKEG---------PRCPKVLGDLVESSLGAILLDSGFNLNTVWK 1363
+ T R E P+ PKVL D+VE+ +GA+ +DS ++ + V
Sbjct: 1233 AQLEQAEETARQTLRAEAESIPQNFWVDVPQPPKVLADVVEALVGAMFVDSEYSFSVVLD 1292
Query: 1364 IMLSFLDPILK 1374
F+ P +
Sbjct: 1293 FFTKFIQPYFE 1303
>gi|307169911|gb|EFN62420.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 506
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 207/429 (48%), Gaps = 61/429 (14%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
+A ++ ALTT+ + F LERLE LGD++LK+ L+ +EG+LT + +
Sbjct: 26 NAVEIMHALTTKLGNDMFDLERLETLGDSYLKFITSLFLYHKFPAFNEGQLTALKGKIIG 85
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGR------------------------RCPR 1115
N NL + N+ I++ F P F R P
Sbjct: 86 NRNLYYCGNKKNIPGRIKNDAFIPTSNFIAPAYTVLRPLQKILLDESVAPNVLYELRIPE 145
Query: 1116 ------ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDD 1169
S++T+ T+ +D G L KTIAD VEAL+G ++
Sbjct: 146 EEKFTGYISEDTKMTMQQIVMNWDKEDTKTGYEHYLGVQILSDKTIADSVEALIGVYLKS 205
Query: 1170 SGFKAATAFLKWIGI----QV-EFEASQVTNICISS---KSFLPLSASLDMATLEILLGH 1221
+G K A LKW GI Q+ E S + I+ S++P + + E +G+
Sbjct: 206 NGIKGAAKLLKWFGILPNIQIDELLYSNPPDPLINPGNPNSYMPWANDM-----ETKIGY 260
Query: 1222 QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+F +R LLQAF HPS+ N + CYQRLEFLGDA+LD+LIT Y+Y L PG LTDL
Sbjct: 261 KFNNRAFLLQAFTHPSYTPNVITECYQRLEFLGDAILDFLITCYIYETCGNLSPGHLTDL 320
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITPSSTREVKEGP 1333
RS LVNN FA +AV L+ + L E I+ +V +Y++ + E
Sbjct: 321 RSALVNNITFACLAVRYGLDTALLSYAPKLHEAIDRFVKFQQERNYVVNDELLWVLLEEE 380
Query: 1334 RC--------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPI 1383
C PKVLGDL ES +GAI LDSG NL VW+I+ SF I KFS N +P+
Sbjct: 381 ECNLAEYVDVPKVLGDLFESLIGAIYLDSGKNLTKVWEIVYSFTHKEIDKFSKNTPKHPV 440
Query: 1384 RELLELCNS 1392
R + E +S
Sbjct: 441 RLIYENTDS 449
>gi|289711908|gb|ACC62400.2| ribonuclease III [Penaeus monodon]
Length = 2473
Score = 198 bits (503), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 216/450 (48%), Gaps = 80/450 (17%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ L+ + EG+L+ RS V+
Sbjct: 1961 SPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVS 2020
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPC-QFFALGRRCPR----------------------- 1115
N NL +L R L + F+P + G PR
Sbjct: 2021 NLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPG 2080
Query: 1116 ---ICSKETERTIHS---QYDGRAPDDLNAEVRCSKG--------------HHWLHKKTI 1155
+ S E R + Q + +E+ ++ H + K+I
Sbjct: 2081 LHDLASDEIRRLVQERSEQIKRSKSEQATSELTATQNPHDLPIFIPYNLLTQHSIPDKSI 2140
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICI------SSKSFL-- 1204
AD VEAL+GA++ G + A F+ W+GI+V E+S + I S +S L
Sbjct: 2141 ADYVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEASELITYGHLESPQSPLYH 2200
Query: 1205 -PLSAS---LDM-----ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
PL+ + LD+ E +G+ F R LLQAF H S+ NRL GCYQRLEFLGD
Sbjct: 2201 CPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQAFTHASYYKNRLTGCYQRLEFLGD 2260
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 2261 AVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVI 2320
Query: 1314 NNYV------------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
++V +Y E E PK LGD+ ES GAI LDSG +L+ V
Sbjct: 2321 RDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAV 2380
Query: 1362 WKIMLSFL-DPILKFSN-LQLNPIRELLEL 1389
W + + + I +FS + +PIRELLE+
Sbjct: 2381 WSVYYTMMCREIEQFSGVVPKSPIRELLEM 2410
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 149/651 (22%), Positives = 261/651 (40%), Gaps = 97/651 (14%)
Query: 428 IVFVNRIVTARALSYILQNLKFLA---SW-RCHFLVGVNAGLKSMSRNA------MKSIL 477
++FV+ A+ + +L+ L + +W + V +K R A + +L
Sbjct: 931 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAEHKKQEEVL 990
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR----------M 527
+FR E +LV+T+V EEG+D+ C LV+RFD P S++ S GRAR
Sbjct: 991 RRFRHHECKILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVLSCGRARGHDTFYFHLIT 1050
Query: 528 PQSEYAFLVDSGNQRELD--LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGA 585
E +FL D L+ + E +RE++ SS+A + + A
Sbjct: 1051 KNQEISFLHDMATYSAFQQVLVSHCGSVEVGTDREVL---SSEANAAHAPYLTPAE---A 1104
Query: 586 CISAGYGVSLLHRYCSKLPHDEF------FNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
++ + LL++YC+KLP D F ++ + ++ C I+LP N+P+
Sbjct: 1105 AVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEEAEVEIPKYKCKIMLPINSPLKGT 1164
Query: 640 VGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG 698
+ P QS + AK A L+ LH++G L+D L P + + + L + +D EG
Sbjct: 1165 IEGPWQSKVSLAKMAAALECCRRLHQMGELDDQLQPVGKESMKLDDHLCAPPADDQVPEG 1224
Query: 699 -------SRGELHEMLVPAVLRQSWTKSQ---YPVRLNFYFMQFIPDPAD----RIY--- 741
R + + V L K + +L+ IPD + +IY
Sbjct: 1225 MPRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYKLDMVLTCPIPDEQNTRGRKIYRPE 1284
Query: 742 ---REFGLFVK------SLLPGEAEHLKVDLHLAR-GRSVMTKLVPSGIMQAQQFQEMFL 791
R FG+ S P +V +H+ R V + + Q F +
Sbjct: 1285 QSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKV--NVTQDQLSALQYFHKFTF 1342
Query: 792 KVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH-KNSVDWKIIRRCLS--SPVFG 848
+L ++ +F P ++ + FY++ F+ +DW+ ++ S P
Sbjct: 1343 THVLRLEKYPIKFDPT-------NARTAFYIVPLNKFNGSEGIDWEFVKEIQSEGDPRPV 1395
Query: 849 TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKD 908
P +K Q + ++ V ++FY V I N S + D
Sbjct: 1396 PPQDDARKK-------FQFQHDLYEDAVVMPWYRNQDQPQYFY-VAEICTHLNPQSDFPD 1447
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL-----------EDSESH 957
+ + + ++ YG+ + + QPLL NLL R + E+++
Sbjct: 1448 AGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEETKRA 1507
Query: 958 ELEEYFDD--LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ E L PELC I F + LP+I++R+ LL+A +L+
Sbjct: 1508 KRENLQQKQILVPELC--TIHPFPASLWRKAVCLPTILYRINALLLADQLR 1556
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
LL H ++LQA + N G +RLE +GD+ L Y IT++LY YP+ G+L+
Sbjct: 1954 LLNHPGPSPSVILQALTMSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2012
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 2013 YLRSKQVSN 2021
>gi|409042283|gb|EKM51767.1| hypothetical protein PHACADRAFT_150441 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1556
Score = 197 bits (501), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 207/728 (28%), Positives = 317/728 (43%), Gaps = 133/728 (18%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + R YQ EL +++ NI++ L TG GKTHIA+L + H + + FLAPT
Sbjct: 12 PGIVTRGYQQELLDESLRRNIVIALDTGSGKTHIAML---RMKHEVEHTSNKVSWFLAPT 68
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
VAL++QQ VI +I V G S + K W + Q+ ++V PQILL L H
Sbjct: 69 VALIEQQRDVIAAAIPVSVGLISGASAPDQWKDADLWLNILSQHRIVVSTPQILLDALRH 128
Query: 173 RFIKM-ELIALLIFDECHHAQVKSNHPYAKIMKDFYKP-------DIMKV--PRIFGMTA 222
+I + + I+LL+FDE HHA S HPY +IM+ FY P DI + P I G+TA
Sbjct: 129 GYINLGKHISLLVFDEAHHAM--SKHPYNEIMRGFYHPLPPRHGCDIQAIVRPAILGLTA 186
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVR--VYQYGPVIN 279
SP+ + +++ KS +E+ LD+ + S + E+L +FV P R +Y
Sbjct: 187 SPIY-----SASDIAKSFREIESNLDSVIRSSRFNREELATFVHRPEFRYILYNQSTFTG 241
Query: 280 DTSSSYVTCSEQLA---EIKREQYISALSRKLHDHQSLRNTTKQLNR------------- 323
SS Y+ + +I+ + Y+ AL +L S KQ NR
Sbjct: 242 ALSSRYLNTLYAVVDSLDIESDPYVIALRSQLAKLPS----GKQRNRVDQKLSKALDKRD 297
Query: 324 ------LHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTID---DSLCRFA 374
L D ++ + G+ A + + S +I+A + ID L +
Sbjct: 298 TFTHKGLRDFLRTATDIYAELGSWPADWYITS--------IIQATNDEIDLHTGVLGSWQ 349
Query: 375 SQASEVFAAICRR---DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQ-QHMKCIVF 430
I R + ++ D I P + L L R + + I+F
Sbjct: 350 DHEKHYLLNILSRVPVETLSYDPEHIRAGITPKVHELLKCLRSEERRSRAEDEPFSGIIF 409
Query: 431 VNRIVTARALSYILQNL-KFLASWRCHFLVGVNAGLK-----SMSRNAMK----SILEKF 480
V R AL+ ++ +L + A ++ L+G +A K +SR+ +K +L+ F
Sbjct: 410 VTRRDAVLALARVISSLPEMTADFQIGCLLGTSASFKRHAFLDISRSLLKETATQVLKDF 469
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
R+G+ NL+V+T V EEG+DIQ C VIRFD P+ + S+ QSRGRAR +S FLV G+
Sbjct: 470 RTGDKNLVVSTAVAEEGIDIQACGTVIRFDPPDNMVSWAQSRGRARRRRS--TFLVMLGS 527
Query: 541 QRELDLIKNFSKEEDRMNREIMDRTSSD----AFTCSEERIYKVDSSGACISAGYGVSLL 596
+ I + + E M + D T + E+ + V +GA ++ +S L
Sbjct: 528 DSASEKIALWQEMEKTMIKLYTDTTRGNDPPPETELEEDLEFVVPHTGAKLTLESSISHL 587
Query: 597 HRYCSKLPH------------------------DEFFNPKPKFYYFDDLGGTICHIILPA 632
+ +C+ LPH D + P P + G C LP
Sbjct: 588 YHFCAILPHSSHTVQGPIFELDPPEYDEGWHSLDPRYAPAP----YGGPWGATC--TLPR 641
Query: 633 NAP-----------------IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
P ++ T QS A+ A A L+ G LND+LLP
Sbjct: 642 QVPKEVKTEDGETIKLRKFSTSRVYPTKQS----ARNHAAFFAYHQLYLAGLLNDHLLPL 697
Query: 676 EDNATEDE 683
+DE
Sbjct: 698 TSAIDKDE 705
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 50/262 (19%)
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS-----KSFL 1204
L K +ADVVE+L+GA + GF AT ++ + ++ + C+ +
Sbjct: 1186 LSTKMLADVVESLIGAAYEHGGFDLATECMQLFHLGID--TWETVPACVEKSLGHIEELG 1243
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL--GGCYQRLEFLGDAVLDYLITS 1262
L +L++ +E ++G++F R LL++A H S+ + Y+RLEF+GDAVLD ++T
Sbjct: 1244 ELPPALEL--VERMVGYKFSKRVLLVEALTHASYTGVIETQSYERLEFIGDAVLDMIVTD 1301
Query: 1263 YLYSVYPK-LKPGQLTDLRSMLVNNQ--AFA----NVAVDQSFYKF-----LIFDS---- 1306
+LY V K PG + + LVN+ AFA +V VD S + ++ D+
Sbjct: 1302 FLYHVPGKNYTPGHMHLRKEALVNSHLLAFACMNTHVDVDASMPAWNAQDGIVLDTATQR 1361
Query: 1307 ------------NVLSETINNYVDYMITPSSTREVKEGP-----------RCPKVLGDLV 1343
VL + Y + + R E + PK + D+
Sbjct: 1362 IPLCRCLLHSSPRVLDDLNLTYARWEKHGAGIRRALEHDVIYPWAALTSLQAPKFVSDMF 1421
Query: 1344 ESSLGAILLDSGFNLNTVWKIM 1365
ES LGAI LDS +L TV ++
Sbjct: 1422 ESVLGAIFLDSHGDLGTVRAVL 1443
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSL 988
P PL+ A+ R RN L D+ + + L P+ + ++ + DI +L L
Sbjct: 921 PSYPLIVAEAPPRRRNFLEPLDSADAGLSDGKPVL--LHPKYTTVDLV-CADDIQFAL-L 976
Query: 989 LPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
LPS++ R ++ + ++ L AS P A + +L ALT + S +RLE LGD
Sbjct: 977 LPSLL-RFASISATVHAVRITLFASSPRLASIPFTLLRPALTAPVATDLVSYQRLETLGD 1035
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY-IRDQPFDPCQF 1106
LKY V L + EG L RR+ +AVNN+ L K A R LQ + IRD+
Sbjct: 1036 TVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWIIRDR------- 1088
Query: 1107 FALGRRCPR 1115
FA + PR
Sbjct: 1089 FAAKKWRPR 1097
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
YQRLE LGD VL Y+++ L++ YP G L + VNN A A+ ++I
Sbjct: 1026 SYQRLETLGDTVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWII 1085
Query: 1304 FD 1305
D
Sbjct: 1086 RD 1087
>gi|157120736|ref|XP_001659747.1| dicer-1 [Aedes aegypti]
gi|108883036|gb|EAT47261.1| AAEL001612-PA [Aedes aegypti]
Length = 2193
Score = 197 bits (501), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 225/479 (46%), Gaps = 110/479 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ ++ V EG+L+ RS V+
Sbjct: 1653 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVS 1712
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L + + +P D PC + + + P
Sbjct: 1713 NLNLYRLGRRKVLGESMIATKFEPHDNWLPPCYYVPKELEQALIDAKIPACHWNLADLPD 1772
Query: 1115 -------RICSKETERTIH------------------SQYDGRAPDDL-NAE-VRCSKGH 1147
IC ER + Q + R + + NAE C +
Sbjct: 1773 IKQLSSEEICRLVKERALALGLLDDSDNEEGETMKEIQQLETRNDEFIKNAEYFACFIPY 1832
Query: 1148 HWLHKKTIAD-----VVEALVGAFIDDSGFKAATAFLKWIGIQV---------------- 1186
+ + + +I D VEAL+GA++ + G + A + W+GI+V
Sbjct: 1833 NLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKVP 1892
Query: 1187 ----EFEAS-----QVTNICISSKSFLPLSASLDMATLEIL----------LGHQFLHRG 1227
+E V + KS L + A TLE L LG+QF R
Sbjct: 1893 GSSQRYEKDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFEDSLGYQFTDRS 1952
Query: 1228 LLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LLQA H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVN
Sbjct: 1953 YLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVN 2012
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVD-------------YMITPSSTREVKEG 1332
N FA++AV F+K+ S L++ I+ +V Y+I+ E E
Sbjct: 2013 NTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLISEDECDEA-ED 2071
Query: 1333 PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLEL 1389
PK LGD+ ES GAI LDS +L+ VWK+ S + P I +FSN + +PIRELLEL
Sbjct: 2072 VEVPKALGDVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPKSPIRELLEL 2130
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVAL 117
R YQ+EL A E N+I+ L K IA+ LI+EL +RKP ++ I+++ ++
Sbjct: 17 RDYQVELLASAKERNLILCLAHNSSKEFIALKLIHELGSQLRKPAGKRKRTIYISQNDSV 76
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+I + KV + DWE+ +D Y+V++ + L + ++ +
Sbjct: 77 FN----LIRDLTDLKVINV-NDLEDADEDYDWEQIVDDYQVIITDERKCLDAIICGYLDL 131
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
+ LL+ D+CH +V N +K+ D+Y + P+I G+ A P+ G L
Sbjct: 132 NEVNLLVIDDCH--KVYGNEEISKLFIDYYNV-CREKPKILGL-AGPLHNAGC-IPGRLS 186
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ LE L AK + D + + + P + Q P N +SY+
Sbjct: 187 AELEQLEYCLQAKAETASDIVTVLRYCTKPKEILLQCAPPANSNLASYL 235
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 203/488 (41%), Gaps = 85/488 (17%)
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL--GGTI--CHIILPANA 634
+ D + + + ++++YC+KLP D F P + + G + C I +P N+
Sbjct: 747 ETDENSNSVRLSNAIQMVNKYCAKLPSDTFTKLTPLWRGAKTVRNGQELYQCTIRMPINS 806
Query: 635 PIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP------------QEDNATE 681
P+ + IVG P + A++ A A LHK G L+D L P ED E
Sbjct: 807 PLKEDIVGLPMPTEILARRMAAYTACRVLHKAGELDDSLQPIGKESFRAFEADWEDFELE 866
Query: 682 -DEPMLFSSDSDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPA 737
++ + +S+ G R + + + + R + Y +N IP+
Sbjct: 867 SNDAQIVIENSEPRPGTTKRRQYYYKRIASAFSECRPTIGSKVYLYHINMTLQCPIPEEQ 926
Query: 738 D----RIY------REFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSG 779
+ +IY + FG+ L+P + +KV L+L R ++ +
Sbjct: 927 NTRGRKIYPPEDSPQGFGILTTKLIPKVSAFPIFTRSGEVKVALNLCDERPILNQ----- 981
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN--SVDWKI 837
Q ++ MF+ + +++ L D E+ + ++P I ++ +VDW
Sbjct: 982 -EQLERIH-MFINYTFTKVLRLQKYLMLYDPDAMENC----FFIVPTITRESVVTVDWNF 1035
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESD-VENSLVYATHK-----KWFY 891
I T +VD+ +P+ P + ++ +S+ ++++V ++ ++FY
Sbjct: 1036 I---------DTIAKNVDK--MPTFIPDENRKNYTFDSNQFKDAVVMPWYRNQDQPQYFY 1084
Query: 892 LVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH---- 947
V I + + S + + S+ ++ Y I +++ KQPLL N L
Sbjct: 1085 -VAEICYHLSPKSSFPGLNYSTFEEYYYKKYSIQIQNCKQPLLDVDHTSARLNFLTPRYV 1143
Query: 948 NRK-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLEN 998
NRK E+++ + E E L PELC I F + + LP I++R+
Sbjct: 1144 NRKGVALPTSSEETKRAKRENLEQKQILIPELC--TIHPFPASLWRAAVCLPCILYRINA 1201
Query: 999 LLVAIELK 1006
LL+A E++
Sbjct: 1202 LLLADEIR 1209
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+ +L++FR E NLL+ T V EEG+D+ C LVIR++ P + S++Q +GRAR + +
Sbjct: 553 EEVLKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARASTAYHI 612
Query: 534 FLV--DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
V S Q +L ++ S +RMN I +++ + T +E+
Sbjct: 613 LFVTPKSDAQNCANLCEDLS---ERMNHYICEKSIAKLNTVNED 653
>gi|315051166|ref|XP_003174957.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
gi|311340272|gb|EFQ99474.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
Length = 1425
Score = 197 bits (500), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 195/703 (27%), Positives = 325/703 (46%), Gaps = 85/703 (12%)
Query: 34 AVSGVGFGAESSVGAQKTDKD----PKQI-ARKYQLELCKKAMEENIIVYLGTGCGKTHI 88
+ SG G ++ +++ KD P + +R YQ+E+ K+++++NIIV + TG GKT I
Sbjct: 16 STSGSGGMSQGEAAHEESPKDQEAAPAMVKSRTYQIEMLKESLKQNIIVAMDTGSGKTQI 75
Query: 89 AVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGS--KRLKS 145
A+L I L R + FLAP V L +QQ + I + F+ + G +R +
Sbjct: 76 AILRIRH--ELERCSNDKLVWFLAPKVPLAEQQYRAISSQLPAFQTKILTGADNLERWST 133
Query: 146 HCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD 205
W+ + ++V PQ+LL L + FI ++ IALLIFDE HH VKS+ P +IM++
Sbjct: 134 QKIWDAFLLNTRIVVSTPQVLLDALSNGFITLQRIALLIFDEAHHC-VKSS-PENRIMQN 191
Query: 206 FYKP------DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAED 259
FY + +P I G+TASP +A L +++++ K ++ ED
Sbjct: 192 FYHARKDQLSETNDLPYILGLTASPTSSLIENALRQLEQNLHAC-----CKTPTIH-RED 245
Query: 260 LESFVSSPVVR--VYQYGPVI------------NDTSSSYVTCSEQLAEIKREQYISALS 305
+ FV P +R YQ +I ND + Y + ++Y
Sbjct: 246 MMQFVHIPELRKVSYQNDSIIPLNMELKFLSMLNDIDTKY--------DPFFQRYQGKTD 297
Query: 306 RKLHDHQSLRNTTK-----QLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIE 360
RK + SL K QL R + LG + ++YI E R E
Sbjct: 298 RKSLERFSLVAARKTPCFVQLKRCCRRISHMFGELGQWAS--STYI----SEVYRRAR-E 350
Query: 361 AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP--FFSKKLLRLIGILST 418
E +D + + + IC ++ P S+K+ L+ ILS+
Sbjct: 351 KETKLLDQNWSEWDRDDTSF---ICNALKPVVEIMGERCWNAPPDVISEKVEHLVHILSS 407
Query: 419 FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNA------GLKSMSRNA 472
L + I+FV + TA L++++ + L + +G +A + +S+
Sbjct: 408 -ELTGASRGIIFVEQRATAVMLTHLISHHPRLTHVNSDYFLGNSAFAARKSDITELSKAG 466
Query: 473 -MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
MK ++ RSG+ NLL+AT V EEG+D+ C LV+ FD P+ + SF+Q RGRAR S+
Sbjct: 467 DMKDSIDDLRSGKKNLLIATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKASSK 526
Query: 532 YAFLV---DSGNQRELDLIKNFSKEEDRMNREIMDR-TSSDAFTCSEERIYKVDSSGACI 587
+ D+ +++ + +++ KE+ N+ +D + E ++++S+GA +
Sbjct: 527 FVIFYAEDDTTTKKDWEAMEDIMKEKYSSNKAFIDSLLEQEDEEEVEYESFRIESTGALL 586
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYY----FDDLGGTICHIILPA--NAPIHQIVG 641
+ S L +CS LP EF + +P F DL ++LP + G
Sbjct: 587 TLENAPSHLSHFCSTLPC-EFTDTQPDFIISKVGIKDL--LTAKVLLPTVLDHQFRDFEG 643
Query: 642 TPQSSMEA-AKKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
E AK+DA +A L+K G +ND+L+P+ AT++E
Sbjct: 644 IEAWKKEKMAKRDAAFQAYLQLYKAGLVNDHLMPEHCRATDEE 686
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 171/408 (41%), Gaps = 65/408 (15%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+PS++H + L+A +L + + +S +++L A+T +E + +RLE LGD
Sbjct: 940 FIPSLIHSIGRFLLAEDLSNTILSSI---GFKDIKLVLTAITATSARENTNYQRLEFLGD 996
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK L H EG L++++ + V+NS L K A L +I F ++
Sbjct: 997 SALKLHASMQLLADHPIWHEGILSKKKDSIVSNSRLWKAAVDTGLDRFILTTCFTGAKWR 1056
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
L + + G A + E L KT+ADVVE+L+GA I
Sbjct: 1057 PL------------YNSTYRHNVGTARREQTRE---------LSTKTLADVVESLIGAAI 1095
Query: 1168 DDSGFKAATAFLKWIGIQVEFEAS--QVTNICISSKSFLPLSASLDMATLEILLGHQFLH 1225
D G L+ ++ + S +V + S+ F ++ +E L+ + F
Sbjct: 1096 VDGGENKVLRCLELFLPEINWLPSGERVEILYDSAPDFSDDFPRDILSKIEPLIDYSFTK 1155
Query: 1226 RGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
R LL + HPS G YQRLEFLGD++LD ++T L+ ++ + +R+ LVN
Sbjct: 1156 RALLAASLSHPSNLISGMTYQRLEFLGDSILDNVVTRALFRCDKEIPHQDMHLIRTALVN 1215
Query: 1286 NQAFA---------------------NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS 1324
A NV V S + ++ S +++
Sbjct: 1216 ADFLAFLCMKTSTDERREDVCASPTGNVKVTSSTRRVSLWQYMAHSASLDILETQQAMAC 1275
Query: 1325 STREVKE--------GPR----------CPKVLGDLVESSLGAILLDS 1354
+ ++++ G R PK D+VES LGAI +DS
Sbjct: 1276 TFEKLRDEIDDALRSGTRYPWTLLSTLNAPKFFSDIVESILGAIFIDS 1323
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
L+L A S R YQRLEFLGD+ L + L + +P G L+ + +V+N
Sbjct: 972 LVLTAITATS-ARENTNYQRLEFLGDSALKLHASMQLLADHPIWHEGILSKKKDSIVSNS 1030
Query: 1288 AFANVAVDQSFYKFLI---FDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVE 1344
AVD +F++ F N+ + + + + +E K L D+VE
Sbjct: 1031 RLWKAAVDTGLDRFILTTCFTGAKWRPLYNSTYRHNVGTARREQTRE--LSTKTLADVVE 1088
Query: 1345 SSLGAILLDSGFN 1357
S +GA ++D G N
Sbjct: 1089 SLIGAAIVDGGEN 1101
>gi|305354766|emb|CBL30926.1| Dicer protein [Echinococcus multilocularis]
Length = 1981
Score = 196 bits (499), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 241/490 (49%), Gaps = 82/490 (16%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
M+L++LT + ++ERLE +GD+FLK+AV LFL + EG L+ RS V NSN
Sbjct: 1505 MILQSLTLLGAGDFINMERLETIGDSFLKFAVTMDLFLRYPEAHEGHLSSLRSQIVGNSN 1564
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHS-QYDGRAPDDLNAEV 1141
L +L NL I F+P + + C +C+ ++ I S + + P
Sbjct: 1565 LYRLGCEKNLPGRIVGMAFEPHENWLPP--C-YVCTTDSTNNIASTRIKNQCP------- 1614
Query: 1142 RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSK 1201
S H +L K++AD VE+LVG ++ + G ++A L+W GI+ A ++ K
Sbjct: 1615 --SLTHQFLTNKSVADCVESLVGCYLTERGERSALKLLQWFGIECLPPAGEMQPAGSPWK 1672
Query: 1202 --SFLPLS----ASLD-------MATLEILLGHQFLHRGLLLQAFVHP------------ 1236
PLS A+++ + LE ++G+ F +R LL++AF H
Sbjct: 1673 LAEEKPLSKVEEATVERVYRAGRFSKLEEIIGYTFKNRRLLIEAFTHSTCRDLHGPPSDD 1732
Query: 1237 ------SFNRLGGCYQRLEFLGDAVLDYLITSYLYSV--YPKLKPGQLTDLRSMLVNNQA 1288
S + G Y+RLEFLGDAVLDY +T +L++ +L PG LTDLRS LVNN
Sbjct: 1733 DGGFHGSVTSISGGYERLEFLGDAVLDYAVTRFLFTTDATARLSPGALTDLRSALVNNVV 1792
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNY-----------VDYMITP--SSTREVK----- 1330
F +AV + FL + L+ T+ + +D +I P ++ RE K
Sbjct: 1793 FGALAVRHGLHAFLRAAAPPLTRTMALFLRHHHDVVRGDLDVLIAPEVNACRENKGATAS 1852
Query: 1331 --EGPRC------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFSN-LQL 1380
EG R PK LGD+ ES GA+ LDSG LNT+W++ L + I ++S +
Sbjct: 1853 QAEGDRANEEVEVPKALGDVFESLAGAVFLDSGLCLNTLWRVFFPLLRERIERYSTCVAK 1912
Query: 1381 NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS-------ACATNLSRK 1433
+P+R LLELC + + P ++ GK +V G + V + + A +L+ +
Sbjct: 1913 SPVRRLLELCPER-VKFERPMVRPDGKMRVVVRVAGIGRYVGVGRTYRLAKSAAADLAYR 1971
Query: 1434 EAIRIASQQL 1443
+++Q+
Sbjct: 1972 RVTEASTEQV 1981
>gi|307190121|gb|EFN74275.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 1976
Score = 196 bits (498), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 227/474 (47%), Gaps = 105/474 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1438 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1497
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFF---------------ALGRRC--PR 1115
N NL +L + L + + +P D PC + AL + P
Sbjct: 1498 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSALWNQADIPT 1557
Query: 1116 ICS----------KETERTI---HSQYD---GRAPDDLNAEVRCSKGH-----HWLHKKT 1154
+ + +ETE + S+ D R ++L+ +RC + H + K+
Sbjct: 1558 LQAVNPTEITQLVRETEEKLVIMKSELDKNESRMSNNLD-NLRCFIPYNLITQHSIPDKS 1616
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQV---------------------------- 1186
IAD VEAL+GA++ G + A F+ W+GI V
Sbjct: 1617 IADCVEALIGAYLIACGPRGALLFMTWLGIHVLPAEEVCVMSESEPEERIPGSTPYVKGI 1676
Query: 1187 -EFEASQVTNICISSKS--------FLP-----LSASLD-MATLEILLGHQFLHRGLLLQ 1231
E + T IC ++P L LD LE +G++F LLQ
Sbjct: 1677 SEQGGATWTQICYGKLEEPQNPLLRYIPDPENELRMMLDGYDELEKSIGYKFRDSSYLLQ 1736
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
AF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN F
Sbjct: 1737 AFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNNTIF 1796
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPK 1337
A++AV F+K+ S LS IN +V +Y + E E PK
Sbjct: 1797 ASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPK 1856
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
LGD+ ES GAI LDSG +L+ VW + + + I +FS N+ +PIRELLEL
Sbjct: 1857 ALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLEL 1910
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 153/678 (22%), Positives = 278/678 (41%), Gaps = 117/678 (17%)
Query: 428 IVFVNRIVTARALSYIL-------QNLKFLASWRCHFLVGVNAGLKSMSRN------AMK 474
++FV++ TA+ L Y+L ++L FL+ + + N + SR+ +
Sbjct: 446 VIFVDKGFTAKILFYLLSEICKHDEDLHFLSPL---YTIERNNDDVNYSRDLEIEHRKQE 502
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR E NLL+AT + EEG+DI C V+R+D P+ S++Q + RAR + +
Sbjct: 503 EVLKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYVQCKSRARAVDALHVL 562
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDRTS-----------SDAFTCSEERIYKVDSS 583
LV + D I ++ + + + ++ + S +D + ++
Sbjct: 563 LVPQEASK--DFIWQLAQYQ-YIEKTLLLKCSNKELTEEEENEADMYAAMIPHYKPLNGD 619
Query: 584 GAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY-FDDLGGTI---CHIILPANAPIHQ 638
A ++ +SL++RYC+KLP D F P++ ++ TI C + LP N+P+
Sbjct: 620 DAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIEVVNIQETIMYTCSLRLPINSPLKY 679
Query: 639 IVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP---------QEDNATEDEPMLFS 688
+V + P + A++ A L+ DLH+ ++D LLP ED P
Sbjct: 680 VVTSYPMPNRAMARRMAALQMCVDLHRENEIDDNLLPIGKENFKAKPEDAEVPALPDESR 739
Query: 689 SD-SDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPAD----RI 740
+D S++ G R + + L R Y +N +P+ + RI
Sbjct: 740 TDFSEARPGTTKRRQYYYKKTAEALTDCRPIVGVPSYLYHINMILSCPLPEEQNTRGRRI 799
Query: 741 YRE------FGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQF 786
Y FG+ +P + + V L L++ ++ ++ + + F
Sbjct: 800 YPPEESAIGFGILTLKEIPKLCPFPIYTRSGEVHVQLKLSKQTIILDEV---QVERVDTF 856
Query: 787 QEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV-IFHKNS-----VDWKIIRR 840
+L ++ F P ++S Y+++PV IF + VDW +
Sbjct: 857 LNYTFTNVLRLQKYLMLFDP--------NASENSYIIVPVKIFTTDEGSDVCVDWNFL-E 907
Query: 841 CLSSPVFGTPGG--SVDRKSLPSHGPLQLHNG----WSSESDVENSLVYATHKKWFYLVT 894
C+ P DRK+ P + ++ W D ++FY V
Sbjct: 908 CIYQNRNAVPTKVPEEDRKNF-KFDPSKYYDAVIMPWYRSQD---------QPQYFY-VA 956
Query: 895 NIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK 950
I N S + D S+ ++ + YGI +++ +Q LL N L NRK
Sbjct: 957 EICTNLNPKSSFPGHDYSTFEEYYLKKYGIQIQNLEQSLLDVDHTSARLNFLTPRYVNRK 1016
Query: 951 -------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
E+++ + E E L ELC I F + LP I++R+ LL+
Sbjct: 1017 GVALPTSSEETKRAKRENLEQKQILVAELC--AIHPFPASLWRQAVCLPCILYRINALLL 1074
Query: 1002 AIELKHLLSASFPEGAEV 1019
A +++ ++ G +V
Sbjct: 1075 ANQIRCQVAQMINLGQQV 1092
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLE 1216
D +E++V F D+ K + FL + + TN + S + P
Sbjct: 1381 DYIESVVRKFTDEVLNKKSAKFLHVAKKINKLDEINYTNGDLFSFDYQPE---------- 1430
Query: 1217 ILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQL 1276
L H L+LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L
Sbjct: 1431 -LKNHPGPSPSLILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKL 1488
Query: 1277 TDLRSMLVNN 1286
+ LRS V+N
Sbjct: 1489 SHLRSKQVSN 1498
Score = 42.0 bits (97), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+EL A E+NIIV LG +T +A+ LI E A R +SI T+ ++
Sbjct: 17 REYQVELLYAAKEKNIIVCLGKNSEQTFLAIKLIQEFATNNR---RSISDGGKRTIYILN 73
Query: 120 QQAKVIEESIGFK----VRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+ K + K ++ S K ++ + ++ VLV ++ + +
Sbjct: 74 DEDKCTIIATYIKQLTDLKVLACNSNIFK---EFAEHFERSHVLVGTAKVYAQLISESKL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPV 225
I L+I DECH + SN + +++ F + VPRI G+ A PV
Sbjct: 131 LSCHINLVIVDECHKSIEDSNLKF--VLQTFLLCN--NVPRIIGL-AVPV 175
>gi|327303976|ref|XP_003236680.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
gi|326462022|gb|EGD87475.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
Length = 1460
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 189/673 (28%), Positives = 318/673 (47%), Gaps = 82/673 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ + ++++NIIV + TG GKT IA+L I L R + FLAP V L +
Sbjct: 83 RGYQREMLEASIKQNIIVAMDTGSGKTQIAILRIRH--ELERCSNDKLVWFLAPKVPLAE 140
Query: 120 QQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ + I E + ++ + G +R + W+ + ++V PQILL L + FI
Sbjct: 141 QQYRAISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFIT 200
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV------PRIFGMTASPVVGKGA 230
+ IALL+FDE HH VK++ P KIMK+FY I ++ P I G+TASP
Sbjct: 201 LRRIALLVFDEAHHC-VKAS-PENKIMKNFYHARIDQLSETNDLPSILGLTASPT----- 253
Query: 231 SAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSP-VVRV-YQYGPVI-NDTSSSY 285
+ S+ LE LDA K ++ E++ +V P +++V YQ +I ++ Y
Sbjct: 254 --SRLIEDSLRQLEQNLDAFCKTPAIH-REEMMQYVHIPELLKVSYQKDSIIPHNMKMKY 310
Query: 286 VTCSEQL------------AEIKR---EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF 330
+ + + + R E+++ AL+RK QL R +
Sbjct: 311 LHMLDDIDIESDPFFQRYKGKTDRKSTERFLCALARKT-------PCLDQLKRCFTKVSH 363
Query: 331 CLENLGVCGALHASYI--LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
LG + ++YI + R +L++ + D F A E AI
Sbjct: 364 MYGELGHWAS--STYISEIYRRTREKRAKLVDQNWSEWDRDDSSFMCNALEPVVAIMGER 421
Query: 389 GIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
S + S K+ L+ +LS+ L + I+FV + TA LS+++ +
Sbjct: 422 CWNSTPDAV--------SPKVEHLVDLLSS-ELTGASRGIIFVEQRATAVMLSHLIAHYP 472
Query: 449 FLASWRCHFLVGVNA------GLKSMSRNA-MKSILEKFRSGELNLLVATKVGEEGLDIQ 501
LA + + +G +A + +S+ MK ++ +SG+ NLLVAT V EEG+D+
Sbjct: 473 ELAHIKSDYFLGNSAFSDRKADITEISKPGDMKDSIDDLKSGKKNLLVATSVLEEGIDVS 532
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMN 558
C LV+ FD P+ + SF+Q RGRAR S++ D+ ++ + +++ KE N
Sbjct: 533 ACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAEDDTATYKDWEAMEDIMKERYLSN 592
Query: 559 REIMDRTSSDAFTCSEERI-YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
+E +DR + E ++++S+GA ++ + L +CS +P EF + +P F
Sbjct: 593 KEFIDRLQEEDDEDEIEYESFRIESTGALLTLANARAHLSHFCSTIPC-EFTDTQPDFII 651
Query: 618 ----FDDLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALND 670
D+ ++LP + + G E AK+DA +A L+++G +ND
Sbjct: 652 SKSGIKDM--LTAKVLLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYEVGLVND 709
Query: 671 YLLPQEDNATEDE 683
+L+P+ T++E
Sbjct: 710 HLMPEHCRTTDEE 722
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 175/408 (42%), Gaps = 66/408 (16%)
Query: 988 LLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+PS++H + L+A EL K +LS P G + + +++L A+T +E + +RLE LG
Sbjct: 976 FIPSLIHTIGRYLLAEELSKTILS---PIGFQ-NIQLVLTAITAASAREDINYQRLEFLG 1031
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK L H EG L++++ + V+NS L K A L +I F ++
Sbjct: 1032 DSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILTTCFTGAKW 1091
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
L +S Y NA K L KT+ADVVE+L+GA
Sbjct: 1092 RPL---------------YNSTYTN------NAGKIGEKSTRELSTKTLADVVESLIGAA 1130
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEAS--QVTNICISSKSFLPLSASLDMATLEILLGHQFL 1224
I D G L+ ++ + S ++ + S+ F ++ +E L+ + F
Sbjct: 1131 IIDGGENKVLHCLELFLPEINWLPSGERIEILYDSALDFNDDCPRDILSKVEPLIEYSFT 1190
Query: 1225 HRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
+ LL + HPS G YQRLEFLGD++LD ++T L+ ++ + +R+ LV
Sbjct: 1191 KKALLAASLSHPSNPISGMTYQRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTALV 1250
Query: 1285 NNQAFA----NVAVDQ----------------------SFYKFLIFDSNVLSETINNYVD 1318
N A N + D+ S ++++ S + ET
Sbjct: 1251 NADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMSHSSTDIVETQQAMAR 1310
Query: 1319 YM--ITPSSTREVKEGPR----------CPKVLGDLVESSLGAILLDS 1354
+ ++ G R PK D++ES LGAI +DS
Sbjct: 1311 TFEELRGQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIFIDS 1358
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
YQRLEFLGD+ L + L + +P G L+ + +V+N AVD +F++
Sbjct: 1024 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1083
Query: 1304 --FDSNVLSETINN-YVDYM--ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F N+ Y + I STRE+ K L D+VES +GA ++D G N
Sbjct: 1084 TCFTGAKWRPLYNSTYTNNAGKIGEKSTRELST-----KTLADVVESLIGAAIIDGGEN 1137
>gi|440632208|gb|ELR02127.1| hypothetical protein GMDG_05286 [Geomyces destructans 20631-21]
Length = 1377
Score = 196 bits (497), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 194/704 (27%), Positives = 312/704 (44%), Gaps = 85/704 (12%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + +R YQLE+ + +M N IV + TG GKTHIAV+ I A L R P + FLAPT
Sbjct: 27 PPEKSRLYQLEMFEASMARNTIVVMDTGSGKTHIAVMRIQ--AELERCPPQKRVWFLAPT 84
Query: 115 VALVQQQAKVIEESIGF-KVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
V L +QQ + +I + + R G R W+ ++ ++V +L L
Sbjct: 85 VTLCEQQYTTLRTNIPYVQTRLLVGSDNVDRWSEQRIWDAVLENVRIVVSTHGVLSDALS 144
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-----KVPRIFGMTASPVV 226
H F+++E + LL+FDE HH HP KIMK++Y P + VP I G+TASPV+
Sbjct: 145 HGFVRIEELTLLVFDEAHHC--AGEHPANKIMKNYYHPLLALKGPNAVPHILGLTASPVI 202
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRV-YQYGPVI--NDTSS 283
S + +++N+L + V E LE VR+ Y P I TS
Sbjct: 203 RSKPSDLEIIERNLNAL-----CRTPRVHRGELLEYVHPPTFVRLAYLSNPSIYGQYTSP 257
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGA--- 340
+ V + A SA D + L++ ++ ++D LG A
Sbjct: 258 ALVNLTIVYANATNS---SASQDSDIDLRELKSFCRKSRHIYD-------ELGQWAADYY 307
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
+ S + S ET RN + ++L + +V +A D D
Sbjct: 308 IKTSVDIWSAAETKRNGDPFFDNGKRSNALLKLLRH--QVQSASSALDSSHPD------- 358
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-RCHFLV 459
E ++K+ +L+ L+++ + I+FV + T L +L RC +
Sbjct: 359 -EMNTTRKVRQLVRFLTSYG-NGDLHGIIFVEQRATVAVLHQLLSLHPMTKGMLRCGTFI 416
Query: 460 GVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
G ++ ++ L+ FR + N ++AT V EEG+DI C +VI F+ P
Sbjct: 417 GTSSFSSRKSSLGDWLTPLEQMDTLDCFRKKDKNFIIATSVLEEGIDISACNIVICFNKP 476
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQ----RELDLIKNFSKEEDRMNREIMDRTSSD 568
+ SFIQ RGRAR +S + LV S ++ +E ++N +EE ++ R
Sbjct: 477 PNLKSFIQRRGRARKSRSIFVLLVSSDDRSLGPQEWGDMENQIREE--YQKDASKRQKLQ 534
Query: 569 AFTCSEERI-------YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL 621
+EE + +++ S+GA ++ V+ +H +C+ LP + + +PKFY+ +
Sbjct: 535 QLEDAEEHVEGRSNARFEIKSTGALLTLETAVAHIHHFCATLPPQPYVDLQPKFYFQESF 594
Query: 622 GGTICHIILPANAPIHQIVGTPQSSME-----AAKKDACLKAIEDLHKLGALNDYLLPQE 676
G I + N + V T S E AKKDA +A L+K G +N+ LL
Sbjct: 595 YGLITGNVTLPNC-VDSSVRTASSGWEWKSERMAKKDAAFQAYVALYKKGLVNENLL--- 650
Query: 677 DNATEDEPMLFSSDSD---SYEGEGSRGELHEMLVPAV-LRQSW 716
P+L + D E S E+ E+ P + + +SW
Sbjct: 651 -------PLLLGKEEDVMADIETRASVEEVSEIFDPWISIAKSW 687
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 226/506 (44%), Gaps = 88/506 (17%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSIMHRL VA++L +A F + ++ + ++ A E + +RLE +GD
Sbjct: 899 LIPSIMHRLWRQAVALDL---YNAVFEDQGFLNLDYVITATNAPSANENSNYQRLEFIGD 955
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LKY V +L+ + EG L+R + AV NS+L + A L YI + F
Sbjct: 956 SVLKYLVCVNLYASQPSWPEGYLSRAKDQAVANSHLSRAALAVGLDRYIVTKTF------ 1009
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
T R Y D L+A S L K +ADVVEAL+G
Sbjct: 1010 -------------TARKWSPPY---IQDILDAA--SSPEKRTLSTKVLADVVEALIGGAF 1051
Query: 1168 DDSGFKAATAFLKWIGIQVEFEAS-QVTNICISSKS-FLPLS-ASLDMATLEILLGHQFL 1224
D G++AA + ++ A + I ++S F P S A+ +A +E L+G+QF
Sbjct: 1052 LDRGYEAAATCISRFLPEMRITAPLDIFARGIHTESVFAPTSLANGHLADVERLIGYQFK 1111
Query: 1225 HRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
+RG LL+A HPS + YQRLEF+GDA LD ++ S++ P+L G++ ++
Sbjct: 1112 NRGYLLEAITHPSCEHDSHTSSYQRLEFIGDATLDMIVVSFMIDNAPELSHGRMHLTKTA 1171
Query: 1283 LVN-------------NQAFANVAVDQSFYKFLIFD--------------------SNVL 1309
+VN Q +VA+ + Y + + +
Sbjct: 1172 VVNAGFLAYLCMDASLEQVVTDVALSPNHYSTGFTEVHSSKLVHLCQLMRHQHPEINTAM 1231
Query: 1310 SETINNYVDYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLN 1359
S + Y + + P+ + G P K L D+VES +GA+L+D+ +L+
Sbjct: 1232 SSCLERY--HKLQPAIASAIAHGNEYPWVLLTSLAPAKFLSDIVESIIGAVLIDAAGDLS 1289
Query: 1360 TVWKI-----MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKV 1414
K+ ++++L IL +P +L E+ + ++ + K+G ++ +V
Sbjct: 1290 ACKKVAENLGLIAYLRRILDEDVNIPHPKNKLGEMSSGRTVEYKLG--KEGQEYTCTVEV 1347
Query: 1415 TGKDKDVFISACATNLSRKEAIRIAS 1440
G I + + +S++E + A+
Sbjct: 1348 GG----TAIVSVSQGISQEEVMTKAA 1369
>gi|411170363|gb|AFW16070.1| dicer-1 [Nilaparvata lugens]
Length = 2239
Score = 195 bits (496), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 244/530 (46%), Gaps = 106/530 (20%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLK+A+ +L+ ++++V EG+L+ RS V+
Sbjct: 1716 SPSVLLQALTMSNANDGINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLRSKQVS 1775
Query: 1080 NSNLLKLAARN---NLQVYIRDQPFD----PCQFFA--LGR---------------RCPR 1115
N NL +L + + +P D PC F L R P
Sbjct: 1776 NLNLYRLGKHKIFGESMIATKFEPHDNWLPPCYFVPKELERALIEAGVPAFQWNQAELPS 1835
Query: 1116 ICSKETE------RTIHSQYDGRAPD------DLNAEVRCSK-GHHWLHKKTIADVVEAL 1162
+ TE + Q G D +L V C+ H + K+IAD VEAL
Sbjct: 1836 LRDMSTEEINAIVKERGEQLQGTMTDSPLSVENLPCFVPCNLITQHSIPDKSIADCVEAL 1895
Query: 1163 VGAFIDDSGFKAATAFLKWIGIQV----EFEASQVTNICISSKSFLP------------- 1205
+GA++ + G + A F+ W+GI+V E + + T + S LP
Sbjct: 1896 IGAYLIECGPRGALIFMSWLGIKVMPCEEVKVTDDTALERPVGSHLPDQNNVQIRYGFVK 1955
Query: 1206 -------------------LSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGC 1244
L A D+ LE L ++F R LLQA H S+ NRL C
Sbjct: 1956 PPRSPLLRHVSNPECELERLLAGFDV--LERSLRYRFNDRSYLLQAMTHASYHTNRLTDC 2013
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGDA LDYLIT +LY + PG LTDLRS LVNN FA++AV F+K+
Sbjct: 2014 YQRLEFLGDAALDYLITRHLYEDKRQHCPGDLTDLRSALVNNTIFASLAVRHGFHKYFCH 2073
Query: 1305 DSNVLSETINNYVD-------------YMITPSSTREVKEGPRCPKVLGDLVESSLGAIL 1351
S LSE I +V Y+I E E PK LGD+ ES GAI
Sbjct: 2074 LSPGLSEVIERFVRIQEENGHAISEECYLIG-EEECEEAEDVEVPKALGDVFESVAGAIF 2132
Query: 1352 LDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLELCNSYDLDLQFPSLKKGGK-- 1407
LDSG +L+ VW + + + I +FS N+ +PIRELLEL P K GK
Sbjct: 2133 LDSGMSLDAVWMVYYHMMKNEIDQFSTNVPKSPIRELLEL---------EPETAKFGKPE 2183
Query: 1408 FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
LA+ + + +VF + R I A++ +LK G + K
Sbjct: 2184 KLADGRRVRVNVEVFGKGTYKGIGRNYRIAKCTAAKCALKQLKKQGLLAK 2233
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 31/274 (11%)
Query: 428 IVFVNRIVTARALSYILQNLKF----LASWRCHFLVGVNAGLKSMSRNA------MKSIL 477
+V V TA+ LS+ +LK L F V A R A + +L
Sbjct: 709 LVLVENRFTAKILSHFSNDLKRNDPDLNHVCAQFTVSKIADPVKEPREAEIEHRKQEEVL 768
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY----- 532
++FR E N+LV T + E+G+D+ C LV+R+++P S+ QS+GRAR P S Y
Sbjct: 769 KRFRMRECNVLVGTSLLEDGIDLPKCNLVVRYNVPTNYRSYAQSKGRARAPDSHYVHLIE 828
Query: 533 -----AFLVDSGNQRELD--LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGA 585
AF+ D E++ L++ S +E + E +D T + + S +
Sbjct: 829 RENCDAFITDLAQFMEIEKMLLRRCSNQEPSEDEEREADLYNDCVTPYKPK----QDSES 884
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKP----KFYYFDDLGGTICHIILPANAPIHQ-IV 640
++ V+ ++RYC+KLP D F P + +F++ +C I LP N+P+ Q IV
Sbjct: 885 SVTMANSVASVNRYCAKLPSDTFTRLTPQATLRRIFFNEQDMYVCTIRLPINSPVKQDIV 944
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
G P + A++ A ++A L++ L+D L P
Sbjct: 945 GHPMPTRVLARRIAAMEACRTLYEARELDDNLQP 978
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI---CIFLAPTVA 116
++YQ+EL A NIIV +G G KT IA+ LI EL++ RK + ++L T
Sbjct: 17 KEYQVELLDAAKNRNIIVCVGNGPNKTFIALKLIQELSNSSRKSVRKYGQRMVYLTATDT 76
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
+V Q V V + K L ++D+ +VLVM + + +
Sbjct: 77 VVSQMGVVFRNLTDLNVGEYISSEKDL--------DLDENQVLVMTSEACWDFIQTGQLN 128
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVP--RIFGMTASPVVGKGASAQA 234
+++ LLI DECHH+ +HP K+M+ + ++ P R+ G+T+ + G G
Sbjct: 129 FKIVNLLIVDECHHS--IRDHPMKKVMEACWH--VLGNPEMRVVGLTSPIMPGPGGGEPG 184
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
L + LE+ L K + D + + S P
Sbjct: 185 RLEAEVKRLEHALHCKAETASDIVSVLRYCSKP 217
Score = 47.0 bits (110), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLY 1265
L++ + L H +LLQA + N G +RLE +GD+ L + IT+YLY
Sbjct: 1697 LTSGFSFDSQPALESHPGPSPSVLLQALTMSNAND-GINLERLETIGDSFLKFAITTYLY 1755
Query: 1266 SVYPKLKPGQLTDLRSMLVNN 1286
VY + G+L+ LRS V+N
Sbjct: 1756 CVYESVHEGKLSHLRSKQVSN 1776
>gi|283827860|gb|ADB44075.1| dicer-1 [Marsupenaeus japonicus]
Length = 2482
Score = 195 bits (496), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 214/450 (47%), Gaps = 80/450 (17%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ L+ + EG+L+ RS V+
Sbjct: 1970 SPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVS 2029
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPC-QFFALGRRCPR----------------------- 1115
N NL +L R L + F+P + G PR
Sbjct: 2030 NLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPG 2089
Query: 1116 ---ICSKETERTIHS---QYDGRAPDDLNAEVRCSKG--------------HHWLHKKTI 1155
+ S E R + Q + +E+ ++ H + K+I
Sbjct: 2090 LHDLASDEIRRLVQERSEQIKRSKNEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSI 2149
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICI------SSKSFL-- 1204
AD VEAL+GA++ G + A F+ W+GI+V E S T I S +S L
Sbjct: 2150 ADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLEDSPETGQLIIYGHLESPQSPLYH 2209
Query: 1205 -PLSAS---LDM-----ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
PL+ + LD+ E +G+ F R LLQAF H S+ NRL CYQRLEFLGD
Sbjct: 2210 CPLTDTKKELDLLLSGYQVFEEKIGYTFQDRSYLLQAFTHASYYKNRLTDCYQRLEFLGD 2269
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 2270 AVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVI 2329
Query: 1314 NNYV------------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
++V +Y E E PK LGD+ ES GAI LDSG +L+ V
Sbjct: 2330 RDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAV 2389
Query: 1362 WKIMLSFL-DPILKFSN-LQLNPIRELLEL 1389
W + + + I +FS + +PIRELLE+
Sbjct: 2390 WSVYYTMMCREIEQFSGVVPKSPIRELLEM 2419
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 153/650 (23%), Positives = 261/650 (40%), Gaps = 96/650 (14%)
Query: 428 IVFVNRIVTARALSYILQNLKFLA---SW-RCHFLVGVNAGLKSMSRNA------MKSIL 477
++FV+ A+ + +L+ L + +W + V +K R A + +L
Sbjct: 941 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAEHKKQEEVL 1000
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR----------M 527
+FR E N+LV+T+V EEG+D+ C LV+RFD P S++ S GRAR
Sbjct: 1001 RRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLIT 1060
Query: 528 PQSEYAFLVDSGNQRELD--LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGA 585
E +FL D L+ + E +RE++ SS+A I ++
Sbjct: 1061 KNQELSFLHDMATYSAFQQVLVSHCGSVEVGTDREVL---SSEANAAHAPYITPAAAAVT 1117
Query: 586 CISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTI---CHIILPANAPIHQIV 640
SA + LL++YC+KLP D F ++ G + C I+LP N+P+ +
Sbjct: 1118 MASA---IGLLNKYCAKLPSDTFTRLTAMWDVEEMEETAGALKYKCKIMLPINSPLKGTI 1174
Query: 641 GTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG- 698
P Q + AK A L+ LH++G L+D L P + + + L + +D EG
Sbjct: 1175 EGPWQDKVSLAKMAAALECCRRLHQMGELDDQLQPVGKESMKLDDHLCAPPADDQVPEGM 1234
Query: 699 ------SRGELHEMLVPAVLRQSWTKSQ---YPVRLNFYFMQFIPDPAD----RIY---- 741
R + + V L K + +L+ IPD + +IY
Sbjct: 1235 PRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYKLDMVLTCPIPDEQNTRGRKIYRPEQ 1294
Query: 742 --REFGLFVK------SLLPGEAEHLKVDLHLAR-GRSVMTKLVPSGIMQAQQFQEMFLK 792
R FG+ S P +V +H+ R V + + Q F +
Sbjct: 1295 SSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKV--NVTQDQLSALQYFHKFTFT 1352
Query: 793 VILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH-KNSVDWKIIRRCLS--SPVFGT 849
+L ++ +F P ++ + FY++ F+ S+DW+ ++ S P
Sbjct: 1353 HVLRLEKYPIKFDPT-------NARTAFYIVPLNKFNGSESIDWEFVKEIQSEGDPRPVP 1405
Query: 850 PGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDS 909
P +K Q + ++ V ++FY V I N S + D+
Sbjct: 1406 PQDDARKK-------FQFQHDLYEDAVVMPWYRNQDQPQYFY-VAEICTHLNPQSDFPDA 1457
Query: 910 DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL-----------EDSESHE 958
+ + ++ YG+ + + QPLL NLL R + E+++ +
Sbjct: 1458 GFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEETKRAK 1517
Query: 959 LEEYFDD--LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
E L PELC I F + LP+I++R+ LL+A +L+
Sbjct: 1518 RENLQQKQILVPELC--TIHPFPASLWRKAVCLPTILYRINALLLADQLR 1565
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
LL H ++LQA + N G +RLE +GD+ L Y IT++LY YP+ G+L+
Sbjct: 1963 LLNHPGPSPSVILQALTMSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2021
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 2022 YLRSKQVSN 2030
>gi|148829108|gb|ABR14013.1| Dicer-1 [Penaeus monodon]
Length = 2473
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 215/450 (47%), Gaps = 80/450 (17%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ L+ + EG+L+ RS V+
Sbjct: 1961 SPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVS 2020
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPC-QFFALGRRCPR----------------------- 1115
N NL +L R L + F+P + G PR
Sbjct: 2021 NLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPG 2080
Query: 1116 ---ICSKETERTIHS---QYDGRAPDDLNAEVRCSKG--------------HHWLHKKTI 1155
+ S E R + Q + +E+ ++ H + K+I
Sbjct: 2081 LHDLASDEIRRLVQERSEQIKRSKSEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSI 2140
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICI------SSKSFL-- 1204
AD VEAL+GA++ G + A F+ W+GI+V E+S + I S +S L
Sbjct: 2141 ADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEASELITYGHLESPQSPLYH 2200
Query: 1205 -PLSAS---LDM-----ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
PL+ + LD+ E +G+ F R LLQAF H S+ NRL CYQRLEFLGD
Sbjct: 2201 CPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQAFTHASYYKNRLTDCYQRLEFLGD 2260
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 2261 AVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVI 2320
Query: 1314 NNYV------------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
++V +Y E E PK LGD+ ES GAI LDSG +L+ V
Sbjct: 2321 RDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAV 2380
Query: 1362 WKIMLSFL-DPILKFSN-LQLNPIRELLEL 1389
W + + + I +FS + +PIRELLE+
Sbjct: 2381 WSVYYTMMCREIEQFSGVVPKSPIRELLEM 2410
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 149/651 (22%), Positives = 259/651 (39%), Gaps = 97/651 (14%)
Query: 428 IVFVNRIVTARALSYILQNLKFLA---SW-RCHFLVGVNAGLKSMSRNA------MKSIL 477
++FV+ A+ + +L+ L + +W + V +K R A + +L
Sbjct: 931 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAEHKKQEEVL 990
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR----------M 527
+FR E N+LV+T+V EEG+D+ C LV+RFD P S++ S GRAR
Sbjct: 991 RRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLIT 1050
Query: 528 PQSEYAFLVDSGNQRELD--LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGA 585
E +FL D L+ + E +RE++ SS+A + + A
Sbjct: 1051 KNQEISFLHDMATYSAFQQVLVSHCGSVEVGTDREVL---SSEANAAHAPYLTPAE---A 1104
Query: 586 CISAGYGVSLLHRYCSKLPHDEF------FNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
++ + LL++YC+KLP D F ++ + ++ C I+LP N+P+
Sbjct: 1105 AVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEEAEVEIPKYKCKIMLPINSPLKGT 1164
Query: 640 VGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG 698
+ P QS + AK A L+ LH++ L+D L P + + + L + +D EG
Sbjct: 1165 IEGPWQSKVSLAKMAAALECCRRLHQMEELDDQLQPVGKESMKLDDHLCAPPADDQVPEG 1224
Query: 699 -------SRGELHEMLVPAVLRQSWTKSQ---YPVRLNFYFMQFIPDPAD----RIY--- 741
R + V L K + +L+ IPD + +IY
Sbjct: 1225 MPRPGTTKRRQYCYKKVAVCLTGEQPKQGLDLFVYKLDMVLTCPIPDEQNTRGRKIYRPE 1284
Query: 742 ---REFGLFVK------SLLPGEAEHLKVDLHLAR-GRSVMTKLVPSGIMQAQQFQEMFL 791
R FG+ S P +V +H+ R V + + Q F +
Sbjct: 1285 QSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKV--NVTQDQLSALQYFHKFTF 1342
Query: 792 KVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH-KNSVDWKIIRRCLS--SPVFG 848
+L ++ +F P ++ + FY++ F+ DW+ ++ S P
Sbjct: 1343 THVLRLEKYPIKFDPT-------NARTAFYIVPLNKFNGSEGTDWEFVKEIQSEGDPRPV 1395
Query: 849 TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKD 908
P +K Q + ++ V ++FY V I N S + D
Sbjct: 1396 PPQDDARKK-------FQFQHDLYEDAVVMPWYRNQDQPQYFY-VAEICTHLNPQSDFPD 1447
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL-----------EDSESH 957
+ + + ++ YG+ + + QPLL NLL R + E+++
Sbjct: 1448 AGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEETKRA 1507
Query: 958 ELEEYFDD--LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ E L PELC I F + LP+I++R+ LL+A +L+
Sbjct: 1508 KRENLQQKQILVPELC--TIHPFPASLWRKAVCLPTILYRINALLLADQLR 1556
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
LL H ++LQA + N G +RLE +GD+ L Y IT++LY YP+ G+L+
Sbjct: 1954 LLNHPGPSPSVILQALTMSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2012
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 2013 YLRSKQVSN 2021
>gi|391328911|ref|XP_003738926.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1347
Score = 194 bits (494), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 203/677 (29%), Positives = 300/677 (44%), Gaps = 108/677 (15%)
Query: 48 AQKTDKDPKQIA-RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS 106
AQ TD ++A R +QLEL + A+++N+I+ LGTG GKT ++ LLI EL H R+ ++
Sbjct: 14 AQTTDSAICELAARHFQLELFELAVKQNVIICLGTGTGKTLVSALLIKELLHQTRERLEN 73
Query: 107 ---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMI 162
+FLAPTV LVQQQ ++ + V +F G + + W +E DQ+ VLVM
Sbjct: 74 GGRRSVFLAPTVPLVQQQTAYLKRHLNASVASFVGAMRVDDWTGTQWWQEFDQHNVLVMT 133
Query: 163 PQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMT 221
P IL L F+ M I LLIFDECH A K PY +IM++ Y PRI G+T
Sbjct: 134 PTILNNILNANFVSMANINLLIFDECHCATGKD--PYVQIMQNHYMSTHPTSRPRILGLT 191
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYG-----P 276
AS V+ K + + I LE L A + + A D +++ P + +Y
Sbjct: 192 AS-VLNKRVKTSEMMDR-IEELECKLGANLVTAFSAVD---YITRPREIIVKYAHRNERS 246
Query: 277 VINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG 336
++ + +E LA + + + RK+ +QLN +
Sbjct: 247 LVTPHPKATAWVNEMLAAVGPFGCLEVIRRKI----------RQLNNM------------ 284
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+LS I AE + R A + +E IC D
Sbjct: 285 ----------ILSE--------IAAEHRLREAKELRQAYEIAE--RTICSWGAPLEDA-- 322
Query: 397 IEVLKEPFFSKKLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNL--KFLASW 453
S+K +L+ +L FR + C IVF T AL ++ + K+ W
Sbjct: 323 ---------SEKAWKLMNVLEAFRTVEEELCGIVFTVERSTVFALCSWIKEMIKKYPERW 373
Query: 454 ---RCHFLVGVNAGL-------------KSMSRNAMKSILEKFRSGELNLLVATKVGEEG 497
RC F++G + S S + +L+ FR +LNLL+AT V EEG
Sbjct: 374 GFLRCDFVIGQHGMTLYGPEYSESFQVPDSDSIRHQERVLQDFRKRQLNLLIATSVIEEG 433
Query: 498 LDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDR 556
+DI C LV+R+D P+ + S++QSRGRAR S Y D + I F E +
Sbjct: 434 VDIPACNLVLRYDPPKNMRSYVQSRGRARGNPSMYLLFADVKAAPVIHQDIFQFKNIEFQ 493
Query: 557 MNR--EIMDRT---SSDAFTCSEER-----IY-KV--DSSGACISAGYGVSLLHRYCSKL 603
+ R RT SS F R IY KV ++ A I+ +L YC L
Sbjct: 494 LLRYCNAHHRTPIESSQMFLHLYNRSHLSNIYSKVHPNNCRAMITPFAARQILQWYCDSL 553
Query: 604 PHDEFFNPKPKFYYFDDLGGTI---CHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAI 659
D + KP + Y + C I LP +P+ IV G + S A+ A + +
Sbjct: 554 GSDRYTLQKPDYVYETAASPSKLVRCGIHLPRQSPLQMIVYGAWEESSLTARTSAAINVL 613
Query: 660 EDLHKLGALNDYLLPQE 676
L+ LG L ++LLP++
Sbjct: 614 SRLYSLGELTEHLLPRK 630
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 186/371 (50%), Gaps = 47/371 (12%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+LKALT + ERLE++GD+FLK AV H + + +EGELT RR ++N +L
Sbjct: 987 ILKALTPLYITDIVDSERLEVIGDSFLKIAVTLHFYQELISSNEGELTTRRCRIISNMSL 1046
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV-R 1142
L+ A + + C F + R + ER + S GR L A+V
Sbjct: 1047 LQHAVPKGIHEMVE------CVKFRV--RVNFVPPGAQERALLS---GRC---LKADVAE 1092
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
S+ + K AD VEAL+G +++ G A +L+W+ I + + +
Sbjct: 1093 MSRRSQYYKSKMCADSVEALIGVYLEKCGPVGALEYLRWLDIPL----GRYNEGDFLDRF 1148
Query: 1203 FLPLSASL-------------DMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQR 1247
LPL L ++ T++ LG+ F + L+L+A H S+ NRL Y+R
Sbjct: 1149 ELPLPEPLREDKKADVERWRKEILTVQETLGYIFQNELLVLEAITHKSYRYNRLTRSYER 1208
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGDAV+DYLI+ Y+Y+ L PGQLTD+R+ LV+N FA + VD + + S
Sbjct: 1209 LEFLGDAVIDYLISKYIYTADSDLNPGQLTDVRASLVSNNTFAAIIVDNKLHTVMQHHSP 1268
Query: 1308 VLSETINNYVDY-------------MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDS 1354
+L + N +V+Y M E E PK LGDL+ES +GA+ LDS
Sbjct: 1269 LLLKLTNRFVEYRETEKRIDILAHMMGEEDEDLEDLEQVDIPKPLGDLMESLMGAVFLDS 1328
Query: 1355 GFNLNTVWKIM 1365
G +L+ VW ++
Sbjct: 1329 GKDLDVVWAVL 1339
>gi|195143531|ref|XP_002012751.1| GL23778 [Drosophila persimilis]
gi|194101694|gb|EDW23737.1| GL23778 [Drosophila persimilis]
Length = 2278
Score = 193 bits (491), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 244/544 (44%), Gaps = 121/544 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1746 SPSVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1805
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1806 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1865
Query: 1115 -------RICSKETERTIHSQYDGRA--------------PDDLNAEVRCSKGHHWLHKK 1153
+IC E+ G A +D + C ++ + +
Sbjct: 1866 IKNLSSVQICEMVREKAEALGLPGSAEQATPQATTVPLDESNDSCNDFSCFIPYNLVSQH 1925
Query: 1154 TIAD-----VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSA 1208
+I D VEAL+GA++ + G + A F+ W+G++V + Q S ++ P S
Sbjct: 1926 SIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYSRQPAPASDSERT--PGST 1983
Query: 1209 SLD---MATL--------------------------------EILLGHQFLHRGLLLQAF 1233
+ D M T+ E LG++F R LLQA
Sbjct: 1984 TPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHLLSGFEEFEASLGYRFRDRSYLLQAM 2043
Query: 1234 VHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA+
Sbjct: 2044 THASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFAS 2103
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPK 1337
+AV F+KF S L++ I+ +V I + + E PK
Sbjct: 2104 LAVRHGFHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPK 2161
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDL 1395
LGD+ ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL
Sbjct: 2162 ALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL------ 2215
Query: 1396 DLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAG 1451
P K GK LA+ + DVF + R I A++ +LK G
Sbjct: 2216 ---EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQG 2272
Query: 1452 YVPK 1455
+ K
Sbjct: 2273 LIAK 2276
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 506 LIYCNQNHTARVLFELLAEMGKRDADLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 562
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 563 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 622
Query: 535 LV 536
LV
Sbjct: 623 LV 624
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 191/496 (38%), Gaps = 81/496 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 829 TGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCAQSERSGVTLYQYTLRLPINSPLKH 888
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P ++ A++ A L+A +LHK+G L+D L P EDE
Sbjct: 889 DIVGLPMTTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 948
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----- 735
++ SD + G R + + + + + P L F + IP+
Sbjct: 949 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIKLTLQCPIPEEQNTR 1007
Query: 736 -----PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQ 782
P + + FG+ +P + +KV L LA+ R V+T P I
Sbjct: 1008 GRKIYPPEDAQQGFGILTMKRIPKLSAFSIFTRSGEVKVSLELAKERVVLT---PEQIGC 1064
Query: 783 AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH------KNSVDWK 836
F +L +F F P S+ ++P + +DW+
Sbjct: 1065 INVFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTLKTGSPPEGSKKIDWQ 1116
Query: 837 IIRRCLSSPVFGTPGGSVDRKSLPSHGPL-QLHNGWSSESDVENSLVYATHKKWFYLVTN 895
+ ++ G+ KS+P L Q + + V + ++ V
Sbjct: 1117 FLELIQAN-------GNTMPKSVPDEERLAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAE 1169
Query: 896 IVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK- 950
I + S + + + + YG+ +++ QPLL N L NRK
Sbjct: 1170 ICPHLSPLSCFPGDNYRTFKHYYFVKYGLTIQNAAQPLLDVDHTSARLNFLTPRYVNRKG 1229
Query: 951 ------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
E+++ + E E L PELC + F + + LP I++R+ LL+A
Sbjct: 1230 VALPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLA 1287
Query: 1003 IELKHLLSASFPEGAE 1018
+++ +SA G +
Sbjct: 1288 DDIRKQVSADLGLGRQ 1303
Score = 48.9 bits (115), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
LP S D+ L+GH ++LQA + N G +RLE +GD+ L Y IT+
Sbjct: 1726 ILPAGFSFDLQPE--LVGHPGPSPSVILQALTMSNAND-GINLERLETIGDSFLKYAITT 1782
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1783 YLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1823
Score = 47.4 bits (111), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ K + ++L+ V + +
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRGRRHGK-VSVYLSCQVGIDK 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ A + + + T + + D + Y V ++ P+ L L +
Sbjct: 77 EPASI------YTMLTHLTDLRVWQEQPDMQTPFAHNWMDYHVSILRPEGFLCLLVSGEL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH + V Y +I+ F I+ PRI G+ A P+ G
Sbjct: 131 PLTSVELIVLEDCHDSAV-----YQRILPIFLD-HILPARPADRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLVTLEQNVLCRIETASDIVTVLRYCSKPHEYIVQCAP 228
Score = 45.8 bits (107), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ LE+LL E + L F + + + M + T + + + +RLE
Sbjct: 2005 LHYAPNAERELEHLLSGFEEFEASLGYRFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2062
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2063 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2115
>gi|268576156|ref|XP_002643058.1| C. briggsae CBR-DCR-1 protein [Caenorhabditis briggsae]
Length = 1863
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 204/454 (44%), Gaps = 81/454 (17%)
Query: 1016 GAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
G VS +LL ALTT + SLER E +GD+FLK+A +L+ EG+L+ RS
Sbjct: 1343 GMGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQEQHEGKLSWARS 1402
Query: 1076 NAVNNSNLLKLAARNNLQVYIRDQPFD-------PCQFFALGRRCPRICS-----KETER 1123
V+N NL +L + + I FD PC + P KE ER
Sbjct: 1403 KEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDAEEKDKEMER 1462
Query: 1124 TIHSQYDGRAPDD-----------------------------LNAEVRCSK----GHHWL 1150
+ Q P++ LN ++ +
Sbjct: 1463 ILSGQTIEEKPENKTGWDLGQDEAKKTVDGIETITFQKQTRILNEDITPLPYNLLTQQNI 1522
Query: 1151 HKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNIC------------- 1197
K IAD +EAL+G + G + W+G++V + Q T++
Sbjct: 1523 SDKAIADAMEALIGVHLLTLGPNPTLKVMNWMGLKV-IQKDQATDVQPPLLRFIDTPINP 1581
Query: 1198 -ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDA 1254
S+K+ L A LE +G++F R L+QAF H S+ NR+ GCYQRLEFLGDA
Sbjct: 1582 DASTKALDNLWQQFQFAQLEEKIGYRFKDRAYLVQAFTHASYINNRVTGCYQRLEFLGDA 1641
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
VLDY+IT YL+ + PG LTDLRS LVNN FA++AV F K I L I
Sbjct: 1642 VLDYMITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIE 1701
Query: 1315 NYVD---------------YMITPSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGFN 1357
+V YM+T + PK LGD+ ES GAI LDSG N
Sbjct: 1702 KFVKLCGDRSFDTNFNTEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRN 1761
Query: 1358 LNTVWKIMLSFLDPILKF--SNLQLNPIRELLEL 1389
L+T W+++ + ++ +N +PIREL+EL
Sbjct: 1762 LDTTWQVIYHLMKGTIETCCANPPRSPIRELMEL 1795
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 259/1071 (24%), Positives = 431/1071 (40%), Gaps = 235/1071 (21%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA ++N IV LGTG GKT IAVLL+ E + P ++ F+ V
Sbjct: 14 RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPLENGGKRAFFVVEKVN 73
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV+QQA IE FKV G + KS ++ + Q V+V+ Q LL + H +
Sbjct: 74 LVEQQAAHIEVHTSFKVGQVHGQTSNELWKSTETCDEFMRQNHVVVITAQCLLDLINHAY 133
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVGKGASA 232
++++ +LIFDECHHA + S HPY IM + K M VPR+ G+TAS + K A
Sbjct: 134 VRLQDTCVLIFDECHHA-LGSKHPYRLIMSKYKELKKAGMPVPRVLGLTASLI--KEKVA 190
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
L + +N LEN+LD+ + + D L + + P + + C
Sbjct: 191 PDKLSEQLNKLENVLDSVIETASDLVSLSKYGARPF--------------EAIILCRNFE 236
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLN---------RLHDSMKF---CLENLGVCGA 340
A+ R + + L D + N T + + DS+K L LG A
Sbjct: 237 ADQLRLRNYETIRDLLKDTEDFVNQTSVFHPDLDLDPRRSIRDSLKTTKAVLRQLGPWAA 296
Query: 341 LHASYILLSGDETMRNELIE-AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
+ + EL + + N + + F + A I R + ++ +
Sbjct: 297 WKTT-------QMWEKELSKLTKTNILPEKALTFLNLARTTMITIKRL--LEPEMREVRS 347
Query: 400 LK--EPFFSKKLLRLIGILSTF-------RLQ----QHMKCIVFVNRIVTARALSYILQN 446
L + F + +R+ IL F RL+ +++ I+FV++ A +L +++
Sbjct: 348 LADLQKFVPHRFVRIFEILEMFQPGFQTERLRKEKPENLSAIIFVDQRYIAYSLHIMIKA 407
Query: 447 LKFLASWRCHF-------LVGVNAGLKSMSRNA-----MKSILEKFRSGELNLLVATKVG 494
++ SW F +VG + + S N L +F E+N+L+AT V
Sbjct: 408 IR---SWEPKFKFLNSDYVVGASGQNLANSDNQGLHKRQTDTLRRFHKSEINVLIATSVL 464
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
EEG+D++ C +VI+FD P + S++QS+GRAR P S Y LVD + D+ SK
Sbjct: 465 EEGVDVKQCNVVIKFDRPLDMRSYVQSKGRARKPGSTYVVLVD-----QKDVTAYCSK-- 517
Query: 555 DRMNREIMDRTSSDAFT--CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
SD FT RI V+ G +YC++L
Sbjct: 518 ----------LPSDIFTRLVPHSRIIPVEDRGVT-----------KYCAEL--------- 547
Query: 613 PKFYYFDDLGGTICHIILPANAPIHQ--IVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
+LP N+PI I+ + + A+ L+A LH G L+D
Sbjct: 548 ----------------LLPINSPIKHAIILKDAMPNKKIAQMAVALEACRQLHLKGELDD 591
Query: 671 YLLPQEDNA-------TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--- 720
LLP+ + +DEP ++ + G R +L++ + L +S +
Sbjct: 592 NLLPKGRESIAKLLEHIDDEPDEYAPGMTAKVGSSKRKQLYDKKIARALNESLIEPDKDC 651
Query: 721 --YPVRLN-FYFMQFIPDPADRIYRE-------FGLFVKSLLPG--------EAEHLKVD 762
Y L F + + +P R ++ FG +P +++V
Sbjct: 652 YIYAFELECFREPEPVANPKRRKFQNPTEYEYCFGFLSTKDIPKIPPFPLFLRQGNMEVR 711
Query: 763 LHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILD-------------RSEFNSEFVPLGK 809
L +A + T++ + Q Q F +L + N+ VPL K
Sbjct: 712 LTVAPEK---TRVTEEQLEQIQYFHNYLFTQVLQMCKTGNLVFDATVNAPLNTLIVPLNK 768
Query: 810 DDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHN 869
S T+ S++ K + ++ + +++P +
Sbjct: 769 -----SKEGTY-----------SINMKYVTEVVA-----------NMENMPRVPTEDVRK 801
Query: 870 GWSSESDV-ENSLVYATHKK----WFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGI 924
G+ +D ++++V ++ FY V +I+ + S + DS+ + ++ I Y +
Sbjct: 802 GFKFNADAYKDAIVMPWYRNVEQPVFYYVADILTDLRPSSQFPDSNFRTFNEYFIKKYHL 861
Query: 925 HLKHPKQPLLRAKPLFRLRNLLHNRK-------------------LEDSESHELE----- 960
+ Q LL NLL R + SES E +
Sbjct: 862 EIYDQDQSLLDVDFTSNRLNLLLPRSQPQPRRARSNSASSTTSNPVTPSESRESQASGGH 921
Query: 961 --EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
L PEL + I S + + +S LPSI +RL LL++ EL+ ++
Sbjct: 922 HSSQRQILVPELMDVHPI--SATLWNVISALPSIFYRLNQLLLSDELREII 970
>gi|125773725|ref|XP_001358121.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
gi|54637856|gb|EAL27258.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
Length = 2280
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 244/544 (44%), Gaps = 121/544 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1748 SPSVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1807
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1808 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1867
Query: 1115 -------RICSKETERTIHSQYDGRA--------------PDDLNAEVRCSKGHHWLHKK 1153
+IC E+ G A +D + C ++ + +
Sbjct: 1868 IKNLSSVQICEMVREKAEALGLPGSAEQATPQATTVPLDESNDSCNDFSCFIPYNLVSQH 1927
Query: 1154 TIAD-----VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSA 1208
+I D VEAL+GA++ + G + A F+ W+G++V + Q S ++ P S
Sbjct: 1928 SIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYSRQPAPASDSERT--PGST 1985
Query: 1209 SLD---MATL--------------------------------EILLGHQFLHRGLLLQAF 1233
+ D M T+ E LG++F R LLQA
Sbjct: 1986 TPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHLLSGFEEFEASLGYRFRDRSYLLQAM 2045
Query: 1234 VHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA+
Sbjct: 2046 THASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFAS 2105
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCPK 1337
+AV F+KF S L++ I+ +V I + + E PK
Sbjct: 2106 LAVRHGFHKFFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVPK 2163
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDL 1395
LGD+ ES GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL
Sbjct: 2164 ALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL------ 2217
Query: 1396 DLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAG 1451
P K GK LA+ + DVF + R I A++ +LK G
Sbjct: 2218 ---EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQG 2274
Query: 1452 YVPK 1455
+ K
Sbjct: 2275 LIAK 2278
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 508 LIYCNQNHTARVLFELLAEMGKRDADLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 564
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 565 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 624
Query: 535 LV 536
LV
Sbjct: 625 LV 626
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 190/496 (38%), Gaps = 81/496 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 831 TGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCAQSERSGVTLYQYTLRLPINSPLKH 890
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P ++ A++ A L+A +LHK+G L+D L P EDE
Sbjct: 891 DIVGLPMTTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 950
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----- 735
++ SD + G R + + + + + P L F + IP+
Sbjct: 951 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIKLTLQCPIPEEQNTR 1009
Query: 736 -----PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQ 782
P + + FG+ +P + +KV L LA+ R V+T P I
Sbjct: 1010 GRKIYPPEDAQQGFGILTMKRIPKLSAFSIFTRSGEVKVSLELAKERVVLT---PEQIGC 1066
Query: 783 AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH------KNSVDWK 836
F +L +F F P S+ ++P + +DW+
Sbjct: 1067 INVFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTLKTGSPPEGSKKIDWQ 1118
Query: 837 IIRRCLSSPVFGTPGGSVDRKSLPSHGPL-QLHNGWSSESDVENSLVYATHKKWFYLVTN 895
+ ++ G+ KS+P L Q + + V + ++ V
Sbjct: 1119 FLELIQAN-------GNTMPKSVPDEERLAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAE 1171
Query: 896 IVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL---- 951
I + S + + + + YG+ +++ QPLL N L R +
Sbjct: 1172 ICPHLSPLSCFPGDNYRTFKHYYFVKYGLTIQNAAQPLLDVDHTSARLNFLTPRYVNRKG 1231
Query: 952 -------EDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA 1002
E+++ + E E L PELC + F + + LP I++R+ LL+A
Sbjct: 1232 VALPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLA 1289
Query: 1003 IELKHLLSASFPEGAE 1018
+++ +SA G +
Sbjct: 1290 DDIRKQVSADLGLGRQ 1305
Score = 48.9 bits (115), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
LP S D+ L+GH ++LQA + N G +RLE +GD+ L Y IT+
Sbjct: 1728 ILPAGFSFDLQPE--LVGHPGPSPSVILQALTMSNAND-GINLERLETIGDSFLKYAITT 1784
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1785 YLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1825
Score = 47.4 bits (111), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ K + ++L+ V + +
Sbjct: 18 RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRGRRHGK-VSVYLSCQVGIDK 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ A + + + T + + D + Y V ++ P+ L L +
Sbjct: 77 EPASI------YTMLTHLTDLRVWQEQPDMQTPFAHNWMDYHVSILRPEGFLCLLVSGEL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH + V Y +I+ F I+ PRI G+ A P+ G
Sbjct: 131 PLTSVELIVLEDCHDSAV-----YQRILPIFLD-HILPARPADRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLVTLEQNVLCRIETASDIVTVLRYCSKPHEYIVQCAP 228
Score = 45.8 bits (107), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ LE+LL E + L F + + + M + T + + + +RLE
Sbjct: 2007 LHYAPNAERELEHLLSGFEEFEASLGYRFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2064
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2065 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2117
>gi|307195788|gb|EFN77602.1| Endoribonuclease Dcr-1 [Harpegnathos saltator]
Length = 1807
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 251/546 (45%), Gaps = 118/546 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1271 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1330
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQF---------------FALGRRC--PR 1115
N NL +L + L + + +P D PC + FAL + P
Sbjct: 1331 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPFALWNQADIPT 1390
Query: 1116 ICS----------KETERTI---HSQYDGRAPD---DLNAEVRCSKGH-----HWLHKKT 1154
+ + KETE + S+ D +L+ +RC + H + K+
Sbjct: 1391 LQAVNPTEINQLVKETEEKLVIMKSELDKNESKLSCNLD-NMRCFIPYNLITQHSIPDKS 1449
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGI------QVEF------------------EA 1190
IAD VEAL+GA++ G + A F+ W+GI +V+ E
Sbjct: 1450 IADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEVQIVSEDEPEERIPGSIPYVKET 1509
Query: 1191 SQVTNICISS-------------KSFLP-----LSASLD-MATLEILLGHQFLHRGLLLQ 1231
S+ I + ++P L LD LE +G++F LLQ
Sbjct: 1510 SEHGEIVWTQIRYGKLEEPQNPLLRYIPDPEGELCMMLDGYEELEKSIGYKFRDSSYLLQ 1569
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
AF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN F
Sbjct: 1570 AFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNNTIF 1629
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPK 1337
A++AV F+K+ S LS IN +V +Y + E E PK
Sbjct: 1630 ASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGKEECEEAEDVEVPK 1689
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLELCNSYDL 1395
LGD+ ES GAI LDSG +L+ VW + + + I +FS N+ +PIRELLEL
Sbjct: 1690 ALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLEL------ 1743
Query: 1396 DLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAG 1451
P K GK LA+ + DVF + R I A++ KLK
Sbjct: 1744 ---EPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKLKRIQ 1800
Query: 1452 YVPKTK 1457
P+ K
Sbjct: 1801 IYPREK 1806
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 146/646 (22%), Positives = 267/646 (41%), Gaps = 98/646 (15%)
Query: 433 RIVTARALSYILQNL--KFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVA 490
+I T Y+L N+ R VG + L+ M + +L++FR E NLL+A
Sbjct: 308 KIKTPYERHYLLLNMVASVFIKIRTTDDVGYSRDLE-MEHRKQEEVLKRFRIHECNLLIA 366
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKN 549
T + EEG+DI C V+R+D P+ S++Q + RAR + + LV +EL +
Sbjct: 367 TSILEEGIDIPKCNFVMRYDFPKNYQSYVQCKSRARAIDALHVLLVPQKISKELIWQLAQ 426
Query: 550 FSKEEDRM-----NREIMDR--TSSDAFTCSEERIYKVDSSGAC-ISAGYGVSLLHRYCS 601
+ E + N+E+ ++ T +D + +D A ++ +SL++RYC+
Sbjct: 427 YQYIEKTLLLKCSNKELTEKEETGADMYAAMIPHYKPLDGDDAPKVTFNSAISLVNRYCA 486
Query: 602 KLPHDEFFNPKPKF----YYFDDLGGTICHIILPANAPIHQIVGT-PQSSMEAAKKDACL 656
KLP D F P++ +++ C + LP N+P+ +V + P + A++ A L
Sbjct: 487 KLPSDTFTRLTPEWSIETVNINEVTMYTCSLRLPINSPMKYVVTSYPMPNRAMARRMAAL 546
Query: 657 KAIEDLHKLGALNDYLLP---------QEDNATEDEPMLFSSD-SDSYEGEGSRGELHEM 706
+ DLH+ ++D LLP ED P +D S++ G R + +
Sbjct: 547 QLCIDLHRGNEIDDNLLPIGKENFKAKPEDAEVPALPDESRADFSEARPGTTKRRQYYYK 606
Query: 707 LVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPAD----RIYRE------FGLFVKSLLP 753
L R Y +N +P+ + RIY FG+ +P
Sbjct: 607 KTAEALTDCRPIVGVPSYLYHINMVLSCPLPEEQNTRGRRIYPPEESAIGFGILTLKEIP 666
Query: 754 --------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFV 805
+ + V L L++ ++ + I + F +L ++ F
Sbjct: 667 KLCPFPIYTRSGEVHVQLKLSKQTVILDDV---QIERVATFLNYTFTNVLRLQKYLMLFD 723
Query: 806 PLGKDDYCESSSSTFYLLLPV-IFHKN-----SVDWKIIRRCLSSPVFGTPGGSVDRKSL 859
P ++S Y+++PV I N SVDW + C+ +R ++
Sbjct: 724 P--------NASENSYIIVPVKIVTTNEGSDISVDWDFL-ECIYQ----------NRNAV 764
Query: 860 PSHGPLQLHNGWSSE-SDVENSLVYATHK-----KWFYLVTNIVFEKNGYSPYKDSDSSS 913
P+ P ++ + + S ++++ ++ ++FY V I N S + D S+
Sbjct: 765 PTKVPEEVRKNFKFDPSKYYDAVIMPWYRSQDQPQYFY-VAEICTNLNPKSSFPGDDYST 823
Query: 914 HVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL-----------EDSESHELE-- 960
++ + Y I +++ +Q LL N L R + E+++ + E
Sbjct: 824 FEEYYLKKYDIQIQNLEQSLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENL 883
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
E L ELC I F + LP I++R+ LL+A +++
Sbjct: 884 EQKQILVAELC--AIHPFPASLWRQAVCLPCILYRINALLLANQIR 927
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 123/305 (40%), Gaps = 22/305 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA----HLIRKPQKSICIFLAPTV 115
R+YQ+EL A E+NII+ LG +T I + LI E A LI K K I++
Sbjct: 17 REYQVELLYAAKEKNIIICLGKNFEQTFIVIKLIQEFATNNRRLISKGGKR-AIYILNNE 75
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+A I++ KV C D+ + + VLV P++ + + +
Sbjct: 76 DKCVIKATYIKQLTDLKV-LVCDSVPE-----DFAESFESSHVLVGTPKVYTQLISEKKL 129
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
I L+I DECH + SN + I++ F + VPRI G+ A P+ A
Sbjct: 130 LPCHINLVIVDECHKSNEDSNLKF--ILQTFLLCN--NVPRIIGL-AVPLFNL-TEAPGR 183
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY-----GPVINDTSSSYVTCSE 290
L I +E V + D + + P V +Y G + N + + +E
Sbjct: 184 LGLEIEKVEATFQCGVETTNDILSIIRYSPKPREYVVEYSKGEKGDLYNTLENLVLDATE 243
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
L + + + D Q + + ++ + + LE LG A A+ LL
Sbjct: 244 FLRDHRYDPTEIYNDEFFEDIQKIPDPREKPLEMMQDFLYILETLGPWCADRAALALLIL 303
Query: 351 DETMR 355
E ++
Sbjct: 304 TEKLK 308
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 1149 WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSA 1208
+ HK I VVE ++ + F++ K I + + + + + S + P
Sbjct: 1209 YKHKDYIGTVVERFTDEVLNKNSFESTEIVKKRIH---KLDETNYLHSDLFSFDYQPE-- 1263
Query: 1209 SLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVY 1268
L GH L+LQA + N G +RLE +GD+ L Y IT+YLY Y
Sbjct: 1264 ---------LRGHPGPSPSLILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTY 1313
Query: 1269 PKLKPGQLTDLRSMLVNN 1286
+ G+L+ LRS V+N
Sbjct: 1314 DNIHEGKLSHLRSKQVSN 1331
>gi|449299331|gb|EMC95345.1| hypothetical protein BAUCODRAFT_46072, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1298
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 198/669 (29%), Positives = 307/669 (45%), Gaps = 97/669 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ + ++ N I+ + TG GKT +A+ I +EL P K I FLA +V L
Sbjct: 6 RAYQREMLEASLCGNRII-MPTGSGKTLVAIARIRHELE--TSTPTKLIW-FLANSVELC 61
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+Q + ++ + + + + G G W+ + V++ P +L L H F+
Sbjct: 62 RQHLETLKLHLSAYPILSLTGEAGVDAWSEQRLWDAVLSDVRVVIGTPAVLKDALSHAFV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP--DIMKVPRIFGMTASPVVGKGASAQ 233
+M +ALL+FDE HH +K NHP IM+ FY P +VP I G+TASP + +AQ
Sbjct: 122 RMSRLALLVFDEAHHC-IK-NHPMNAIMQHFYHPGNSHKEVPHILGLTASPAI----NAQ 175
Query: 234 ANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
S+ LE LDA V + + + EDL FV P + + QY P + Y SE
Sbjct: 176 YG---SLTQLEANLDAFVATPKRSIEDLMRFVYPPHITIVQYPPT---SILDYPASSELC 229
Query: 293 AEIKR---------EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHA 343
A +KR + Y++ L + HD +S R K + + S + L C
Sbjct: 230 AAVKRAVDEYDFLTDPYVAELG-QYHDERSRRKLQKTVEKRTTSCYDEISKLNRCAEAVY 288
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV--LK 401
+ + E N IE R+ + AA+ + D++ +E L
Sbjct: 289 DQLGVPSAEHFVNTCIE-----------RY------ITAAVSYGTTMLPDITSLERQHLV 331
Query: 402 EPF------FSKKLL------RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+ F F +LL RL+ +L+ + ++ IVFV AL ++L+N +
Sbjct: 332 DLFRAFPARFPGRLLVSPKADRLLSLLAAY-ASPEVRAIVFVKERAVVTALVHLLRNAEQ 390
Query: 450 LASWRCHFLVGVNAGLKSM-SRNAMKSI---------LEKFRSGELNLLVATKVGEEGLD 499
L R H+ +G G + R+++ + L FR G+ NL+VAT V EEG+D
Sbjct: 391 L---RGHYSIGSFVGTSTFEGRSSLADLADPRQQQNDLLGFRRGDKNLIVATSVLEEGID 447
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR 559
+ C LVI FD P+T +F+Q RGRAR S Y LV + R + EE +M R
Sbjct: 448 VSACNLVINFDQPDTFIAFLQRRGRARQENSRYFLLVSEDDTRA--SASKWQAEEAKMKR 505
Query: 560 EIMDRTSSDAFTCSEE------RIYKVDSSGACISAGYGVSLLHRYC-SKLPHDEFFNPK 612
E + A +E+ R Y+V+S+GA ++ + L+ +C + + + + + +
Sbjct: 506 EYESARAERAAAEAEDVQALNARSYRVESTGALLTINDAKAHLYHFCNTSVQANNYVDTE 565
Query: 613 PKFYYF--DDLGGTICHIILPANAPIHQIVGTPQ-----SSMEAAKKDACLKAIEDLHKL 665
P FY D T + LP+ +H V + SS A KDA +A LHK
Sbjct: 566 PDFYAVRGKDNAWT-ASVTLPSY--VHPDVRSAASRDRWSSEAGAIKDAAFEAYVALHKA 622
Query: 666 GALNDYLLP 674
G L D LLP
Sbjct: 623 GLLTDNLLP 631
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 216/488 (44%), Gaps = 86/488 (17%)
Query: 943 RNLLH--NRKLEDSESHELEEYF--DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLEN 998
R+ LH + ++++ EE F +D E L+ F+ + +PSIMH+++
Sbjct: 833 RDFLHPVQARQHSNQAYTKEESFALEDCTVEKTPLRSARFA-------AFIPSIMHQVDV 885
Query: 999 LLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHL 1058
L E++H S+ + + +++ +A++ E+ RLE LGDA LK+ V ++
Sbjct: 886 RLTVQEMQH--SSVLQDLQLKNGDLIQEAISAPSAAEKSDYNRLEYLGDALLKFWVSINV 943
Query: 1059 FLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICS 1118
+LH T E LT +S V+N+ L + A L +I + F G + I +
Sbjct: 944 MVLHPTWPEKYLTMEKSRRVSNNTLAQAAHNLQLNRWILTKSF-------TGTKWRPIYA 996
Query: 1119 KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
E RT SQ P +++ KT+ADVVEAL+GA D G++ A
Sbjct: 997 SEVLRTDFSQ-----PKQISS-------------KTLADVVEALIGAAYLDGGYQNAYTC 1038
Query: 1179 LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPS 1237
++ + Q S+ IC S + + +A+ +++ L +GH F LL++A H S
Sbjct: 1039 IRSLLKQC---WSEHYLICSSLRGHMEQTAADQVSSDLGRFIGHHFRFPYLLIEALTHAS 1095
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA----N 1291
F R Y+RLEFLGDAVLD +I YL KLK ++ D+ LVN N
Sbjct: 1096 LPFQRRMMSYERLEFLGDAVLDAIIVPYLCGNARKLKASEMHDIHEALVNEHFLGYCCLN 1155
Query: 1292 VAVDQSFYKF---------------------------LIFDSNVLSETINNYVDYMITPS 1324
++Q + L+ V + Y D + T
Sbjct: 1156 AKIEQEYRTVEKTGDGHDVSTATRTLKLADFIRAGGQLLKAKQVAMANFDRYQDAVATAL 1215
Query: 1325 STREVKEGP-----RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSF-----LDPILK 1374
+ E P PK D+VES LGA+ +D+ +++ + + +D +L+
Sbjct: 1216 ADGEEYPWPDLIAMNLPKAFSDVVESVLGALYIDTDGDMSVCEQFVAKLGIYKHMDIMLR 1275
Query: 1375 FSNLQLNP 1382
SN+++ P
Sbjct: 1276 -SNMKVVP 1282
>gi|322704697|gb|EFY96289.1| Dicer-like protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1476
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 183/653 (28%), Positives = 287/653 (43%), Gaps = 74/653 (11%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL--- 99
ES Q+ P+Q YQ++L ++A E+N I+ L TG GKT+IAVLL+ + L
Sbjct: 110 ESGTSHQRIVTTPRQ----YQIDLFERAKEQNTIIVLDTGSGKTYIAVLLLRHVLALELE 165
Query: 100 IRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVL 159
++ K FL VAL QQ + ++ ++ + V G ++ +W EI + V+
Sbjct: 166 TQQQTKRTAFFLVDKVALCLQQHRFLQANLEYPVGKLYGDKASMR---EWASEIQENMVI 222
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFG 219
V QILL L + M I LL+FDE HH K NHPYA IM+D Y PRI
Sbjct: 223 VCTAQILLDLLSSGLVTMNQINLLVFDEAHH--TKKNHPYATIMRDHYIRMKAHHPRILA 280
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESF-VSSPVVRVYQYGPVI 278
MTASPV K A + LE L +K+ +V + L + RV +YGP +
Sbjct: 281 MTASPVDSKTRDFYA----AALDLEATLCSKIATVSEEVLLAGMGRKQQIERVIEYGP-L 335
Query: 279 NDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC 338
D + + L+ +Y S L ++ ++ +G
Sbjct: 336 ADPADEMTMTTLSLSLSTLCRYQSNFQIHL-----------------EAARYTASTIGPW 378
Query: 339 GA-LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI------CRRDGIA 391
GA + + S D+ + + E NT D+ + + + + I R +
Sbjct: 379 GADQYWRQLFKSPDQYL--TITELTANTADELISQVSGTYCQAHEQIDDDLIKARARKLV 436
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKF- 449
+D E ++ FS K+ L IL F QQ +CIVFV + A LS
Sbjct: 437 TDHVHNESNQD--FSLKVDALHEILHDAFESQQSTRCIVFVQKRYIAFLLSEAFNRSALR 494
Query: 450 LASWRCHFLVGVNAGLKSMSRNAMKSILE---KFRSGELNLLVATKVGEEGLDIQTCCLV 506
+ F+VG S+ ++K +E +FR GE+N + AT+V EEG+DI C L+
Sbjct: 495 IQDMTAGFVVGSQPASSSIVNMSIKDQIESLNRFRYGEINCIFATQVAEEGIDIPECDLI 554
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN----------QRELDLIKNF--SKEE 554
IRFDL ++ +IQS+GRAR S Y +V+ N R++ ++ F S
Sbjct: 555 IRFDLYDSAIQYIQSKGRARQTNSVYVNMVERDNIQHRRKLIQATRDVHALRRFCSSLPS 614
Query: 555 DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKL-----PHDEFF 609
DR ++ + ++V +GA ++ +L ++ S + H E+
Sbjct: 615 DRKINDVEINDGLLGLQAKSQISFEVPQTGARLTFDSSRGVLAKFVSSVCGGADAHPEYI 674
Query: 610 NPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDL 662
++G ++LP + P+ GTPQ S A+ A KA +L
Sbjct: 675 VTS------TEMGKFTAIVLLPDSCPVKSFSGTPQRSKLLARGSAAFKACIEL 721
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 200/461 (43%), Gaps = 70/461 (15%)
Query: 972 QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS-ASFPEGAEVSAEMLLKALTT 1030
Q + D+ + LP ++ +E+ +A++ + A +P ++ E L K
Sbjct: 974 QANMFQLPVDVVVTAFALPVAIYSIESAAIAMDACGSIDLAIYPP---LALEALTKGEED 1030
Query: 1031 EKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN 1090
Q + ERLE LGDAFLK A LF L +E E R + N NL A
Sbjct: 1031 VDVQTSKNYERLEFLGDAFLKMATTISLFTLIPNRNEFEYHVERMILICNKNLFNHAVDR 1090
Query: 1091 NLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWL 1150
LQ Y+R + FD ++ P + ++ ++ P L L
Sbjct: 1091 GLQEYVRSRGFDRRSWY------PDLVLRKGKK--------HKPVGLTQR---------L 1127
Query: 1151 HKKTIADVVEALVGA--FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL-PLS 1207
K+IADV EAL+GA + G A +K + + V+ + ++ + ++ P
Sbjct: 1128 ADKSIADVCEALIGAAYMTEPEGMDLA---VKAVTVMVQSKNHRMKKYSDYYEKYVQPAW 1184
Query: 1208 ASLDMATLEIL--------LGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLD 1257
++ +E+L +G+ F LL AF HPS+ YQRLEFLGDA+LD
Sbjct: 1185 QTIPSRPIELLAVGKVKASIGYNFRSPKLLRSAFKHPSYPYEPELPNYQRLEFLGDALLD 1244
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
I +L+ YP P LT+ + + +N F+ + V+ ++ ++ + + I +V
Sbjct: 1245 VAIVDFLFQRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSIMGHIAGFV 1304
Query: 1318 DYMITPSSTRE----------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
+ + S E E P PK L D++E+ +GA+ DS ++ N+V
Sbjct: 1305 EQIEKAKSQTEDGVLQLDFWLNTEHP--PKALSDILEAVVGAMYEDSKYDYNSVRNFFTK 1362
Query: 1368 FLDPILKFSNLQL-------NPIRELLEL------CNSYDL 1395
F+ P F ++ L +P+ +L +L C S+ L
Sbjct: 1363 FIAPY--FQDMTLYDTYAGGHPVTQLTKLMQDTFCCRSWRL 1401
>gi|389740167|gb|EIM81358.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 1537
Score = 193 bits (490), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 189/724 (26%), Positives = 316/724 (43%), Gaps = 108/724 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++ NI++ L TG GKTHIAVL + H + K +C FL PTVAL
Sbjct: 14 RGYQQEMLDESLNNNIVIALDTGAGKTHIAVL---RMRHEVEKETTKVCWFLTPTVALCY 70
Query: 120 QQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ VI+ + V G + K W + + + ++V +LL L H +I +
Sbjct: 71 QQRSVIQSHLHVPVAMISGALEPDQWKDPNLWSRTLATHRIVVSTHDVLLNALRHGYIHL 130
Query: 178 -ELIALLIFDECHHAQVKSNHPYAKIMKDFY-------KPDIMKVPRIFGMTASPVVGKG 229
I+L++FDE HHA K HPY +IM++FY + D PR+ G+TASPV G
Sbjct: 131 GRHISLVVFDEAHHAADK--HPYNRIMQEFYFELPKVDRGDGNVRPRVLGLTASPVFG-- 186
Query: 230 ASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVR--VYQ-------YGPVIN 279
++ ++ LE LD + + V + +L + V P + +Y+ YG +
Sbjct: 187 ----GDIERAFLKLEANLDCTIRAPVANRSELATHVHRPEFKHVIYEEPEYMMGYGEAPS 242
Query: 280 DTSSSYVTCSEQLAEIKREQYISALS-----------RKLHDHQSLRNTTKQLNRLHDSM 328
+ S + E L +I+++ Y+ L R D + + +Q + H M
Sbjct: 243 ASVVSLQSVVESL-DIRQDPYVLGLQAELARLPPGPDRSRTDQRLSKTINRQDSYTHKGM 301
Query: 329 K-FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFAS-----QASEVFA 382
+ F +C L A + D ++ ++E +T+ + FA + +
Sbjct: 302 RDFFRAADEICSDLGA----WAADWYVQT-VLEQAWDTMKGPVPEFAGALNNREKQYLMG 356
Query: 383 AICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL----STFR-LQQHMKCIVFVNRIVTA 437
A+ R E+++ S K+ +LI L F + ++FV R
Sbjct: 357 ALSRVQATPVSYDPEEIVRRS--SDKVKKLIETLLHEKEVFESYDEEYHGLIFVTRRDAV 414
Query: 438 RALSYILQNLKFLAS-WRCHFLVGV--NAGLKS---MSRNAMKS----ILEKFRSGELNL 487
ALS IL+N +R L+G+ N+ K+ ++RN +K L F+ G+LNL
Sbjct: 415 IALSEILENHPETKDVFRTGALLGMSENSARKAFLDITRNMLKQSNEDTLRDFKVGDLNL 474
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR----- 542
+VAT V EEGLD+Q C V+R+D P + S+ QSRGRAR +S + + + +
Sbjct: 475 IVATAVAEEGLDVQACNNVVRWDPPMNMVSWAQSRGRARRQRSSFVLMFSTASVHAKDVQ 534
Query: 543 -----ELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLH 597
E ++++ ++ E R + + + + +GA I+ ++ L+
Sbjct: 535 GWEYLEQEMVRMYNMERQRREEDEAGEEDEEDGNEEYVKPLYNEKTGAKITLDSAITHLN 594
Query: 598 RYCSKLP-------HDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQ------ 644
+C+ LP H ++ P + + I +LP P V P+
Sbjct: 595 HFCAILPGGGGLGSHSPIYDINPPEFPSEWHAQPIA--LLPYAGPFGATVTLPKLLDRRF 652
Query: 645 ---------SSMEAAKKDACLKAIEDLHKLGALNDYLLPQE---DNATEDEPMLFSSDSD 692
A++ +A + LH G LND+LLP + EDE S+ D
Sbjct: 653 RVFSTPVIHGRKSYARRRVAFEAYKALHDAGLLNDHLLPLMSVLEPELEDEVKKLLSEVD 712
Query: 693 SYEG 696
+G
Sbjct: 713 KRDG 716
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 217/529 (41%), Gaps = 100/529 (18%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSL-LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEML 1024
L PE + + F + + +L +PSI+ L + ++ L P + + ++L
Sbjct: 959 LLPEFSTVALTSF---VETQYALWMPSILRYLSITMTVCAMRDDLLLGSPRLSAIPLKLL 1015
Query: 1025 LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
A+T+ Q + +RLE LGD LK+ +L + EG L RR+ +AV+N+ L
Sbjct: 1016 TTAVTSGVAQMGMNYQRLETLGDTVLKFVTSLNLLSEYPFWHEGYLARRKDHAVSNAQLA 1075
Query: 1085 KLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV--R 1142
K A L YI F P ++ R I + E S P+D+ V R
Sbjct: 1076 KAAYEKKLFKYIIRDMFAPRKW-----RPTYIGGAKVEPP--SDAKAEDPEDMAPTVVKR 1128
Query: 1143 CSKGHHWLHK------------KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE- 1189
KG K K +ADVVEAL+GA F A +K G+ + E
Sbjct: 1129 PQKGPSEAKKKQRAKAQGEISTKVLADVVEALIGAAYIHGSFDLAVECIKVFGLGLSCEW 1188
Query: 1190 ---ASQVTNIC--ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
A+++ + + F P ++ +E +LG+ F + LL++A H S+ G
Sbjct: 1189 LPIAARIEPMLSRVIELEFFPTQ----LSAVENILGYTFERKALLVEALTHASYQTDLGT 1244
Query: 1245 --YQRLEFLGDAVLDYLITSYLYSVYPK-LKPGQLTDLRSMLVNNQAFANVAVDQSFY-- 1299
Y+R+EFLGDAVLD L+T YLY K KP +L ++ +VN + + S +
Sbjct: 1245 ISYERMEFLGDAVLDMLVTDYLYHAPGKDYKPAELHLRKTAVVNGHFLGFICLRASTFIS 1304
Query: 1300 -----------------KFLI-----------------FDSNVLSETINNYVDYMITPSS 1325
FLI +S VL N + + T
Sbjct: 1305 TEMPTKVNNPNSRRRGNAFLIQLEQQQERLYLSKCLLHSNSKVLELQSNAFARFEKTDGG 1364
Query: 1326 ---TREVKEGP----------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
R + E P PK L D+VES +GAI LDS N + V +
Sbjct: 1365 EHIERSLLEDPIFPWAALTWLEAPKFLSDMVESLIGAIFLDSKGNWDVVRDV-------- 1416
Query: 1373 LKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDV 1421
L+L I E+LE D++++ P + + K TG + +V
Sbjct: 1417 -----LRLLGIWEVLERIVRDDVEVKHPVSRLAEWAAKQEKETGIETEV 1460
>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
Length = 1607
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 259/1051 (24%), Positives = 433/1051 (41%), Gaps = 185/1051 (17%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIF 110
D + R YQ+EL + A++ENIIVYL TG GKT IA LLI E +H + KP S +F
Sbjct: 28 DTEFTPRDYQIELFQAALDENIIVYLPTGSGKTFIAALLIKEKSHEVTKPLDSGGKRTVF 87
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L PTV L QQA + KV+ F G + W E D VLVM QI +
Sbjct: 88 LVPTVVLAIQQAAYLRRHTYLKVKEFYGSMGVDIWEKDRWNIEFDSNHVLVMTAQIFVDI 147
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H F + LL+FDEC HA VK + P +++ ++ + P+I G+TA+ + +
Sbjct: 148 LNHAFFSPHQLNLLVFDEC-HAAVK-DAPMKQVLSKLKNCEVSQRPKILGLTAA--LFRM 203
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY-------GPVINDTS 282
+P I L + V D E + + P + QY P ++ S
Sbjct: 204 RCKPEKVPDLIQQLSETMGCVVRIPSDVETVARSSTKPCETILQYEDKNSNPNPDADELS 263
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK---FCLENLGVCG 339
L + +QY S+ D + +++ L D++ + L +G G
Sbjct: 264 RIIFVMVSSLMQQLEQQYGEGNSK---DGPDVNKQPDKIDVLFDALNDIDYLLSTIGPYG 320
Query: 340 ALHASYILLSGDETMRNELIEAE--GNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
A H +++ + E ++ A + I +C + + + + +C
Sbjct: 321 AFHCAHVYIRILERTKSRAKTAPFLTDLIRKQVC---NGLNFIISEVC------------ 365
Query: 398 EVLKEPFFSK--KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
P+F+K + RL+ + + +H + F+ + T +
Sbjct: 366 ----TPYFAKYSPVDRLLLFVQPRDIAKHDTTLEFLKPLFTMGKAA-------------- 407
Query: 456 HFLVGVNAGLKSMSRNAMKS--ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
G N+ LK MK I++ FR G NLLVAT V EEG+DI C L+IRFD +
Sbjct: 408 ----GRNSSLKETQILNMKQNEIMQYFREGLCNLLVATSVLEEGIDIPDCNLIIRFDRIK 463
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRE--LDLIKNFSKEEDRMN----REIMDRTSS 567
T ++Q++GRAR ++ Y LV G DL + S E+ ++ + D
Sbjct: 464 TYCDYVQTKGRARSKKAFYCILVSRGETESCLADLAQFHSIEQQLLSTGNFEDERDNAID 523
Query: 568 DAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP-------------- 613
+ F+ G I+ +SL++RYC +L D + P
Sbjct: 524 NLFSQIIPPYVPFGEDGPRITLPSSISLINRYCGQLSSDPDVSLAPQLTTKKVAESDVDP 583
Query: 614 ------------------KFYYFDDLGGTICHIILPANAPIH-QIVGTPQSSMEAAKKDA 654
K+ ++L CH+ LP N+P+ +++G + AK+
Sbjct: 584 IQLQKIKDILKKLPTDASKYSSINNLFQ--CHLFLPLNSPLRDEVIGDVMPTKRLAKRAV 641
Query: 655 CLKAIEDLHKLGALND-YLLPQED-NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVL 712
LKA LH+L L+D +L P N +DE SS D + + V
Sbjct: 642 ALKASIKLHELKELDDNHLFPVPRLNVIDDE----SSTEDEENSAAPQLNKENIAV---- 693
Query: 713 RQSWTKSQYPVRLNFYFMQFIPDPADRIYR---EFGL------FVKSLLPGEAEHLKVDL 763
Y RL F P P + +F L K P VD
Sbjct: 694 --------YNRRLPVCFSNCRPLPGQPCFVYAIDFTLTKPCLDITKLYFP-----FAVDT 740
Query: 764 HLARGRSVMTKLVPS-----GIMQAQQFQEMFL---KVILDRSEF------------NSE 803
LA + +K++P+ + +A +FQ VILD+S+ +
Sbjct: 741 KLA---ILTSKVIPAICPFPVVTRAGEFQVNLCGADSVILDQSQLGKLERFHQFVFQDVL 797
Query: 804 FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHG 863
F+ + D+ +S YL++P+ + +D+ ++ +++P +++ + P G
Sbjct: 798 FLWKRQLDFDVLASDLQYLVVPLQTANDKIDFALVENMINAP-------AINWEKPPYAG 850
Query: 864 PLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKDSDSSSHVDHL 918
H + S S + +S++ ++K FY+ + V + +P+ +++ ++ +
Sbjct: 851 D---HFIFDS-SRLIDSVIVPSYKPLGTLNAFYV--DRVSDLTPLTPFPNNEFKTYASYF 904
Query: 919 ISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
Y + L + +Q LL+ +N L NR E + L ELC + +
Sbjct: 905 QLKYKLTLTNQQQQLLQVSREISGKNFLVNRVASTREETPMH-----LVAELCHVHPLAG 959
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
S I + LP I+HRL+ +LVA EL+ L+
Sbjct: 960 S--IWKQVVWLPCILHRLDRMLVAEELRVLV 988
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 206/421 (48%), Gaps = 64/421 (15%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLF--LLHDTVDEGELTRRRSNA 1077
S M+L+ALT K E F +ER E +GD+ LK + +++ D DEG L+ R
Sbjct: 1154 SPGMILEALTLAKTHEGFDMERSETIGDSILKLVISIYVYGETGSDRCDEGRLSLMRMRQ 1213
Query: 1078 VNNSNLLKLAARNNLQVYIRDQPFD-PCQFFALGRRCPRICSKETERTIHSQYDGRAPD- 1135
+NN +L KL A+ ++ + Q F+ F G + P PD
Sbjct: 1214 INNKHLFKLGAKKDIGEFTVAQRFELMANFLPPGFKTPT-----------------DPDT 1256
Query: 1136 DLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTN 1195
D+NA V+ ++ K +AD +EAL+G ++ +G K A + W+G++ T
Sbjct: 1257 DINAHVQ-----QYVLMKNVADCMEALIGVYLTTTGIKGAIKLMDWMGLKTVPRLEIATF 1311
Query: 1196 ICISSKSFLPL---SASLD-----------------MATLEILLGHQFLHRGLLLQAFVH 1235
++ LP S++L+ + + E L + F ++ LL++A H
Sbjct: 1312 NEMNGFPILPSTFGSSTLNDTQLKDQEEALSQLFAGLESFEKRLRYTFKNKALLIEALTH 1371
Query: 1236 PSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA 1293
S+ NR+ CYQRLEFLGDAVLDYL+T Y Y + P LTDLRS +VNN+ FA +A
Sbjct: 1372 ASYIPNRITNCYQRLEFLGDAVLDYLVTRYYYDNPCQYTPAILTDLRSAMVNNETFAVMA 1431
Query: 1294 VDQSFYKFL---------IFDSNVLSETINNYV---DYMI---TPSSTREVKEGPRCPKV 1338
V F+ +L I D V S+ N ++ +Y + T + + PKV
Sbjct: 1432 VQNRFHLYLKHLSLSLNVILDRFVRSQEENGHLLMHNYFVLEETSEPHQSLASNIDVPKV 1491
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQ 1398
LGD+ ES GAI +DSG +L+ VWK L FL L+ N ++ PI L L Y L+
Sbjct: 1492 LGDIFESVAGAIFVDSGMSLDAVWKSYLPFLHDALEKFNEKI-PISALRVLHERYPNALK 1550
Query: 1399 F 1399
F
Sbjct: 1551 F 1551
>gi|321458470|gb|EFX69538.1| hypothetical protein DAPPUDRAFT_329028 [Daphnia pulex]
Length = 1597
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 280/1098 (25%), Positives = 442/1098 (40%), Gaps = 163/1098 (14%)
Query: 53 KDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI--- 107
++PK+ I R YQLEL + A EN IVYL TG GKT IAVLLI + A + K I
Sbjct: 5 EEPKENSIPRNYQLELYEHARRENTIVYLPTGSGKTMIAVLLIRDYAAQVNKFAAQIKCF 64
Query: 108 ---------CIFLAPTVALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQY 156
+FL PTV L +QQA I +V + G G K W KE+++
Sbjct: 65 RPLAQDGQRVVFLVPTVILAKQQAAYIRRHTCLEVGEYYGELGVDLWKGD-RWAKELEKN 123
Query: 157 EVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKV 214
VLVM Q+ + + H FI + +ALL+ DECH A S ++ I+ + + + V
Sbjct: 124 NVLVMTAQLFVNAVNHGFISVGQMALLVIDECHRAVKDSPMKHSLIVLNEFCQRHGAGSV 183
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY 274
PR+ G+TA+ + K ++ K+I+ L+ +++ + + + + + P+ + +Y
Sbjct: 184 PRVLGLTAALFLEK--CKPKDVTKNISKLKTSMNSIIRTAH-PHKIAGYSTKPIEIICEY 240
Query: 275 GPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLEN 334
+T + + L+ +E + L D +L + +K
Sbjct: 241 SSWQENTGNCE---TAWLSSHIQELLDTCLMELRGDLDCDSPCPGELTDILREIKILTSI 297
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
G G H I E R + + + + E IC + I L
Sbjct: 298 FGPYGTNHTVSIF--SKEIRRLGFQSVNNSQLVNRFFKIVDVMLEEIRKIC--EFIFGQL 353
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTF---------RLQQHMKCIVFVNRIVTARALSYILQ 445
S IE L+ F + + RL+ IL F + + IVFV R +A L +IL+
Sbjct: 354 SPIERLRL-FTTPHVTRLMDILRQFSPGEIDTTAKFTPLLCSIVFVERRSSANVLYHILR 412
Query: 446 NLK----FLASWRCHFLVGVNAG--LKSMSRN-----AMKSILEKFRSGELNLLVATKVG 494
L+ F +G +G M N + I+ +FR G NLLVAT V
Sbjct: 413 EASQCDPGLSYLNPLFTMGQASGNPKGKMKENHHLNQSQSKIIRQFRDGTCNLLVATSVL 472
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE-LDLIKNFSKE 553
EEG+D++ C LVIRFD +T ++QS+GRAR P + Y +V + LD + F
Sbjct: 473 EEGVDVRACNLVIRFDGIKTFCDYVQSKGRARSPNAFYILMVPTEKLSPFLDTLAGFHFI 532
Query: 554 EDR-------MNREIMDRTSSDA-FTCSEERI---YKVDSSGACISAGYGVSLLHRYCSK 602
E M + D SD ++I Y G ++ +SLL+ YC+
Sbjct: 533 EQSLMDPSSVMMSSVTDDEPSDPQLEQLWQKIIPPYCPYPDGPRVTLLSSISLLNWYCAT 592
Query: 603 LPHDEFFNPKPKFY------------------YFDDLGGTI-----CHIILPANAPIH-Q 638
LP D P + + LG TI C ++LP N P+ +
Sbjct: 593 LPSDGSAPLAPYYVVNRISAGSLAEMDRDHTNHLRRLGSTIQNPFRCTLLLPLNCPLRDE 652
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALND-YLLPQEDNATE-DEPMLFSSDSDSYEG 696
++G S AK++ L+A LH+LG L+D +L+P + E DE D
Sbjct: 653 LIGRVMPSKRLAKQEVSLQACIRLHQLGELDDQHLMPLSKSVVETDENADVDFDCQFEHS 712
Query: 697 EGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPA--------DRIYREFGLFV 748
+GS + + V R P L + + D A +R R G
Sbjct: 713 QGS-----DFYLRGVARLLDGVIASPFYLYLLTYEVVKDSAQPENQFDPNRAQRRMGFLS 767
Query: 749 KSLLPG-------------EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL 795
LP L+VD L +L + +FQ+ + IL
Sbjct: 768 SQKLPAVNPFGLYSPAGQINVGFLEVDSFL--------RLTLDDVKLCHRFQQFLFEKIL 819
Query: 796 DRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVD 855
+P G++ Y S S YL++P+ N +D + L S V
Sbjct: 820 Q--------LP-GEEQYNPSRGS--YLVVPIT--NNRIDVAFMNEHLDSTV-----PDWQ 861
Query: 856 RKSLPSHGPLQLHNGWSSESDVENSLVYATH-----KKWFYLVTNIVFEKNGYSPYKDSD 910
S Q+ + + D ++V A H K Y V + E S + +
Sbjct: 862 PHPPSSLSSSQVVDYFKVYGD---AVVTAHHDQTKGKSSCYYVNAVRPEVTPLSRFPNPA 918
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRA-KPLFRLRNLLHNRKLEDSE-SHELEEYFDDLP- 967
+++ ++ + + + QPLL K F+ N L + + E + E + LP
Sbjct: 919 YATYANYFRDRHNAIIANLSQPLLEVRKESFKTFNFLTPKYVNRKEAADEGDGEIQSLPK 978
Query: 968 ------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
PE C++ F + +PSI +RL +LL+A EL+ + A G V
Sbjct: 979 GSIYFVPEFCEVH--RFPASMWRQAVWIPSIFYRLNSLLLADELRMEIQAKTGLGLSVLP 1036
Query: 1022 EML----LKALTTEKCQE 1035
L L+ T+ KCQ+
Sbjct: 1037 PNLQWEPLQMKTSGKCQQ 1054
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 202/432 (46%), Gaps = 65/432 (15%)
Query: 1014 PEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDT-VDEGELTR 1072
P+G S +L+ALTT + LERLE++GD+FLK A ++ + EG++T
Sbjct: 1147 PKGP--SPGEVLRALTTSVANAGYDLERLEVIGDSFLKLAASIRVYCDSPSHFHEGKMTH 1204
Query: 1073 RRSNAVNNSNLLKLAARNNLQVYI-------RDQPFDPCQFFALGRRCPRICSKETERTI 1125
R V N NL KL ++ ++ ++ PC F T+
Sbjct: 1205 LRMLQVCNRNLFKLGKIKSIPRFVVATKFVAKENWLPPCYF-----------PNNTDDDC 1253
Query: 1126 HSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ 1185
P+ +K + KK++AD VEAL G ++ G K A ++W+G+
Sbjct: 1254 MELETDEKPN--------AKLWQRISKKSVADSVEALFGLYLTLHGIKGALKVMRWMGVN 1305
Query: 1186 VEFEASQVTNICISSKSFL--PLSASLD--------------MATLEILLGHQFLHRGLL 1229
V + + SS P LD TLE L +F +R L
Sbjct: 1306 VPDSSGDEDSSSSSSSFGGTPPEPLLLDSPQAKHLLDDHLAGFETLERSLNFRFGNRFYL 1365
Query: 1230 LQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYP-KLKPGQLTDLRSMLVNN 1286
LQAF H S+ NR+ CYQRLEFLGDAV DYLIT YLY +L PG L+D+RS LVNN
Sbjct: 1366 LQAFSHASYHHNRMTSCYQRLEFLGDAVFDYLITKYLYDCRLFQLTPGALSDMRSALVNN 1425
Query: 1287 QAFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPR 1334
FA +AV F+++L + + I+ +V ++ + + + E
Sbjct: 1426 VTFAVLAVRNGFHRYLKHLVPDVHQAIDRFVQQQEMCDHATPDEFFLIGTHDDPMAEAVE 1485
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN--LQLNPIRELLELCNS 1392
PKVLGD+ ES +GA+ LDS +L+ VW++ + ++ + +PIR + E
Sbjct: 1486 VPKVLGDIFESLVGAVFLDSDMSLDAVWRVFYPLIRQEIEACTRVVPKSPIRTIYE---K 1542
Query: 1393 YDLDLQFPSLKK 1404
Y +QF +L+
Sbjct: 1543 YPGKVQFKTLEN 1554
>gi|343791208|gb|AEM61141.1| RNase III dicer-like protein [Puccinia striiformis f. sp. tritici]
Length = 1386
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 187/653 (28%), Positives = 287/653 (43%), Gaps = 82/653 (12%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKS-ICIFLAPT 114
+I R YQ EL ++A + NII+ TG GKT +A+ LI + A P I FL PT
Sbjct: 19 KIPRLYQAELLEEAKKRNIIIRADTGTGKTLVALNLIAWTAAQPKSNPDDHLIQAFLVPT 78
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHR 173
LV QQA+ I+ +V+ + G + + D W+ E+++ +VLV Q+
Sbjct: 79 RPLVHQQAEYIQSQSILRVKAYTGDLQPELWNIDKWQSELNEVDVLVSTAQV-------- 130
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY----KPDIMKVPRIFGMTASPVVGKG 229
+LLIFDE HH + NH Y +IM+ Y K ++P+I G+TASP+
Sbjct: 131 -------SLLIFDEAHHC--RKNHVYNQIMRSHYHRLAKNPTNRLPKILGLTASPIWNY- 180
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
K ++ E+ D+ S SS ++Y+ I+D S +
Sbjct: 181 --------KDLDKAED-------------DIRSLQSSLAAQIYEVKRHIDDVSQHNFKPT 219
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
E + LS D +L LH S K + V L L+
Sbjct: 220 ELAIYFEPSPDFVKLSHHPWDQ------INELLTLHASPKLIVAFESVSLELGTYAYSLA 273
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
+ +++ L + S + I + D I+ + E S K+
Sbjct: 274 ILDWLKSLLTIGSTKQLMSGRLLDPSHQERIQGLIKQLDETVD----IDDIPEDQLSAKV 329
Query: 410 LRLIGILSTFRLQQ---HMKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVNA-- 463
+ L IL ++ + + CIVFV R A+ L +L+ N + R L G
Sbjct: 330 IALNKILVNYKEKDDHGNFLCIVFVERRQHAQLLPILLERNTQLKDFLRPAALTGHGGHN 389
Query: 464 -----GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
G+K SR K++ KFR+GE NL +AT V EEGLD ++C +VIRFDL T +
Sbjct: 390 ENDIIGIKMDSRTQKKTV-AKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGY 448
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSE---- 574
IQSRGRAR SEY ++ +G+ + FS EED + + DR ++ E
Sbjct: 449 IQSRGRARARDSEYIVMLPAGSSSKY---LAFSGEEDNLKAALYDRPENELIGEGEVEST 505
Query: 575 -ERIYKV-DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT-ICHIILP 631
+ I ++ D + ++ SLL+ C +P DEF Y LG IC + LP
Sbjct: 506 PQLICRLPDGKDSILTYSAATSLLNDVCQLIPPDEFLPIVAPEYEMTCLGDNFICQVTLP 565
Query: 632 ANAPI----HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNAT 680
A + G ++ + AK+ A +A L + G LN++ LPQ ++ T
Sbjct: 566 PMAALDPSQRTFKGLEMTTKKEAKRSAAFEACRVLRERGVLNEHFLPQREDKT 618
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 226/490 (46%), Gaps = 60/490 (12%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
LP +LC I + + S LPS+ + + L A L L+ FP +S + +
Sbjct: 875 LPLKLCTGTHI--PRTLWKVFSYLPSLTRLVHDSLQATALFEQLN--FPT---ISLLLGM 927
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+ALT + + LE +GD FLK A H++L H EG+++ RS +V+N+ L +
Sbjct: 928 QALTPPGVGVPWDYQTLETVGDTFLKLATSVHVYLSHLKKGEGDMSHVRSKSVDNAYLRR 987
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A + NL +I Q F R R +TE DG+ E+
Sbjct: 988 KAVQANLPSFILSQRF----------RTDRFRDAQTE-------DGK-------ELANGS 1023
Query: 1146 GHHWLHKKTIADVVEALVGA-FID---DSGFKAATAFLKWIGIQVEFEASQVTNICISSK 1201
+ ++ ++DVVEAL+GA F+ + G K TA G V + + N+ S
Sbjct: 1024 FSRTIPRRVLSDVVEALLGAGFLTGGIELGLKVGTALDLCFGGTVPWN-QRTLNLSFESA 1082
Query: 1202 SFLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDY 1258
+ L S L TL+ +G+ F + LL+QA H S N + CY+R E+LGDAV+D
Sbjct: 1083 ALSRLDPSILLKCETLQQKIGYVFKEQLLLVQALTHRSANSFMTNCYEREEWLGDAVIDM 1142
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYV 1317
I + + + +LT R+ +V+N + +A+ + + ++ S + +
Sbjct: 1143 WIVEHAFKRFANATAEELTLARARVVSNGSLGFLAIKKLGLQEIIMHKSENFDQACREAI 1202
Query: 1318 DYMITPSSTRE----------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM-L 1366
+ I P + E V P PK+L D++E+ +G++ +DSGF+L TV++ + +
Sbjct: 1203 E-AIEPFTKIEEFFSKMDNLFVVFDP--PKILNDVLEAIVGSVFIDSGFDLQTVYRTLDI 1259
Query: 1367 SFLDPILKFSNL-QLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD-VFIS 1424
F D I S L +P+ +L L + Y Q L++ + E G+DKD + +
Sbjct: 1260 IFEDVIPGMSRLVNRDPLSTMLRLRDQY----QCMELRRISTTVNEPNPEGEDKDPISVK 1315
Query: 1425 ACATNLSRKE 1434
C +E
Sbjct: 1316 VCRVEFHGEE 1325
>gi|383862048|ref|XP_003706496.1| PREDICTED: endoribonuclease Dcr-1-like [Megachile rotundata]
Length = 1952
Score = 192 bits (489), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 242/550 (44%), Gaps = 126/550 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1416 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1475
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFALGRRCPRICSKETERTIHSQYD-- 1130
N NL +L + L + + +P D PC + I S T+ +Q D
Sbjct: 1476 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIKSG-IPSTLWNQADIP 1534
Query: 1131 ---GRAPDDLNAEVRCSK---------------------------------GHHWLHKKT 1154
P+++ VR ++ H + K+
Sbjct: 1535 TLQAVNPNEITQLVRETEQKLGIMKDELVRNEAILSNNLDNLRCFIPYNLITQHSIPDKS 1594
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS------------ 1202
IAD VEAL+GA++ G + A F+ W+GI V + ICI ++
Sbjct: 1595 IADCVEALIGAYLIACGPRGALLFMAWLGIHV----LPMEEICIVQETEPEERIPGSTPY 1650
Query: 1203 -----------------------------FLP-----LSASLD-MATLEILLGHQFLHRG 1227
++P L LD LE +G++F
Sbjct: 1651 VKGTNDQGEVTWIQIRYGKLEEPQNPLLRYIPNPEQELLMMLDGYEELEKNIGYKFNDIS 1710
Query: 1228 LLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LLQAF H S+ N+L CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVN
Sbjct: 1711 YLLQAFTHASYQPNKLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALVN 1770
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGP 1333
N FA++AV F+K+ S LS IN +V +Y + E E
Sbjct: 1771 NTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEKCEEAEDV 1830
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLELCN 1391
PK LGD+ ES GAI LDSG +L+ VW + + + I +FS N+ +PIRELLEL
Sbjct: 1831 EVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYVIMKNEIEQFSTNVPKSPIRELLEL-- 1888
Query: 1392 SYDLDLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKL 1447
P K GK LA+ DVF + R I A++ KL
Sbjct: 1889 -------EPETAKFGKPEKLADGHRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKL 1941
Query: 1448 KAAGYVPKTK 1457
K P+ K
Sbjct: 1942 KQMQNYPRDK 1951
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 153/677 (22%), Positives = 281/677 (41%), Gaps = 117/677 (17%)
Query: 419 FRLQQHMK--------C-IVFVNRIVTARALSYIL-------QNLKFLASWRCHFLVGVN 462
F+ Q+HM+ C ++FV++ A+ L Y+L ++L+FL+ + + N
Sbjct: 418 FKFQRHMRGATDPDLLCGVIFVDKGFVAKVLFYLLNEISAHDEDLEFLSPL---YTIERN 474
Query: 463 AGLKSMSRN------AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
S S++ + +L+KFR E NLL++T + EEG+DI C V+R+D P+T
Sbjct: 475 TDDVSYSKDLEIEHKKQEEVLKKFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQ 534
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRE--LDLIKNFSKEEDRMNR------EIMDRTSSD 568
S++Q + RAR + + LV +E L + E+ + + + +D
Sbjct: 535 SYVQCKSRARAIDALHVLLVPKETSKECIWQLAQYHYIEKTLLIKCSNNEPSEEEENEAD 594
Query: 569 AFTCSEERIYKVDSSGAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGG 623
+ + A ++ +SL++RYC+KLP D F P++ D++
Sbjct: 595 MYAAMIPHYKPLSEDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIEQINSDNMPM 654
Query: 624 TICHIILPANAPIHQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-------- 674
+C + LP N+P+ V + P + A++ A L+ DLH+ ++D LLP
Sbjct: 655 YVCSLRLPINSPVKYAVSSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKA 714
Query: 675 -QEDNATEDEPMLFSSD-SDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYF 729
ED P D S++ G R + + L R Y +N
Sbjct: 715 KPEDAEVPALPDEIKVDFSEARPGTTKRRQYYYKKTANALTDCRPIVGAPSYLYHINMVL 774
Query: 730 MQFIPDPAD----RIYRE------FGLFVKSLLP--------GEAEHLKVDLHLARGRSV 771
+P+ + RIY FG+ +P + + V L L++ V
Sbjct: 775 SCALPEEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVQLKLSKCTVV 834
Query: 772 MTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN 831
+ ++ I + F +L ++ F P ++S Y+++PV
Sbjct: 835 LNEI---QIEKISTFLNYTFTNVLRLQQYLMLFDP--------NASENSYMIVPVKLDTE 883
Query: 832 S---VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLVYATHK 887
S VDW+ + C+ + +R ++P+ P + + + S +++++ ++
Sbjct: 884 SDVTVDWEFL-ECIYN----------NRTTVPTKVPEEDRKDFKFDASKYQDAVIMPWYR 932
Query: 888 -----KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRL 942
++FY V I N S + D S+ ++ Y I +++ QPLL
Sbjct: 933 NQDQPQYFY-VAEICTNLNPKSSFPGDDYSTFEEYYFKKYEIQIQNLDQPLLDVDHTSAR 991
Query: 943 RNLLH----NRK-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
N L NRK E+++ + E E L ELC I F + L
Sbjct: 992 LNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELC--AIHPFPASLWRQAVCL 1049
Query: 990 PSIMHRLENLLVAIELK 1006
P I++R+ LL+A +++
Sbjct: 1050 PCILYRINALLLANQIR 1066
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 35/261 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-----QKSICIFLAPT 114
R+YQ+EL A ++NIIV LG +T I + LI E A R+P ++S+ I
Sbjct: 17 REYQVELFYAARDKNIIVCLGKSYEQTFIVIKLIQEFAANNRRPLSEGGKRSLYILTDEE 76
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYE---VLVMIPQILLYCLY 171
++ +A I++ KV + C + +D++E VLV+ ++ L
Sbjct: 77 KCII--KASYIQQLTDLKVLMYTA--------CSSNEFVDKFETSHVLVLTSEVCTKLLA 126
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ I I L+I DECH + +++ I++ F VPRI G+ A P+
Sbjct: 127 EKKILPHQINLVIVDECH--KFINDNKLKFILQTFLS--CTDVPRIIGL-AVPLF----- 176
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
++ L ++ VE E +S ++ + +Y P + Y +
Sbjct: 177 -------NLTQEPGRLGLEIEKVETTFQCEVETASDILSILRYSPKAKEYIVEYCNGEKG 229
Query: 292 LAEIKREQYISALSRKLHDHQ 312
I + YI L DH+
Sbjct: 230 ELHITIKNYILHAIEFLRDHR 250
>gi|350423180|ref|XP_003493408.1| PREDICTED: endoribonuclease Dcr-1-like [Bombus impatiens]
Length = 1934
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 222/473 (46%), Gaps = 103/473 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1398 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1457
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFF------------------------A 1108
N NL +L + L + + +P D PC + A
Sbjct: 1458 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIKSGVPSTLWNQADIPA 1517
Query: 1109 LGRRCPRICS---KETER---TIHSQYDGRAPDDLNA--EVRCSKGH-----HWLHKKTI 1155
L P + +ETE+ + ++ D N VRC + H + K+I
Sbjct: 1518 LQAVNPSEITQLVRETEQKLGVMKTELDRNETSLSNNLDNVRCFIPYNLITQHSIPDKSI 1577
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV---------------------------EF 1188
AD VEAL+GA++ G + A F+ W+GI V
Sbjct: 1578 ADCVEALIGAYLIACGSRGALLFMAWLGIHVLPTEEITIIQESEPRERVPGSTPYIKGTN 1637
Query: 1189 EASQVTNICISSKS----------FLP-----LSASLD-MATLEILLGHQFLHRGLLLQA 1232
E Q T I ++P L LD LE +G++F LLQA
Sbjct: 1638 EKGQTTWTQIRYGKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKSIGYEFHDISYLLQA 1697
Query: 1233 FVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
F H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA
Sbjct: 1698 FTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDGRQHSPGALTDLRSALVNNTIFA 1757
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPKV 1338
++AV F+K+ S LS IN +V +Y + E E PK
Sbjct: 1758 SLAVRCGFHKYFRHLSPGLSIVINRFVRIQQENGHSISEEYYLIGEEECEEAEDVEVPKA 1817
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
LGD+ ES GAI LDSG +L+ VW + + + + I +FS N+ +PIRELLEL
Sbjct: 1818 LGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLEL 1870
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 238/1087 (21%), Positives = 425/1087 (39%), Gaps = 197/1087 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK-----PQKSICIFLAPT 114
R+YQ+EL A +++IIV LG +T I + LI E A R+ ++S+ I
Sbjct: 17 REYQVELFYAAKDKDIIVCLGKNYEQTFIVIKLIQEFATNNRRLLSEGGRRSLFILTDEE 76
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYE---VLVMIPQILLYCLY 171
++ A I++ KV C C + I+ +E VLV + L
Sbjct: 77 KCTIK--ASYIQQLTDLKV-LLCDT-------CSLTEFIENFETSHVLVTTAKTCAQLLT 126
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
I I L+I DECH + N+ I++ + VPRI G+ A P+
Sbjct: 127 DGKILPCQINLVIIDECHKS--IDNNKLKFILQTILACE--NVPRIIGL-AVPLF----- 176
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
++ L ++ VED E +S ++ + +Y P + Y +
Sbjct: 177 -------NLTQEPGRLGLEIEKVEDTFQCEVETASDILSILRYSPKPKEYVVEYAKNEKG 229
Query: 292 LAEIKREQYISALSRKLHDH----------------QSLRNTTKQLNRLHDSMKFCLENL 335
E YI L DH Q + + T++ + + LE L
Sbjct: 230 KLHTTMENYILHALEFLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLYILETL 289
Query: 336 GVCGALHASYILLSGDETMRNELIEAEG----NTIDDSLCRFASQASEVFAAICRRDGIA 391
G A A+ LL E ++ + N + + + F + ++ I
Sbjct: 290 GPWCADRAALALLILIEKLKVKTPYERHYLLLNMVASVFTKIRALCDNTFEVLSEKERIY 349
Query: 392 SDLS-----CIEVLKE--PFFSKKLLRLIGILSTF--------------RLQQHMKCI-- 428
+ +++LK P+++K + + L+ R +HM+ I
Sbjct: 350 KYTTPKVHRLLQILKTYTPYYNKNINKTANKLNENIPQKLPVNNRGKPPRASRHMRGITD 409
Query: 429 -------VFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN---------- 471
+FVN+ A+ L Y+L + + HFL + L ++ RN
Sbjct: 410 PDLLCGVIFVNKAFVAKVLFYLLNEIS-MHDKDLHFL----SPLYTIERNIEDISYSKDL 464
Query: 472 -----AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
+ +L++FR E NLL++T + EEG+DI C V+R+D P+T S++Q + RAR
Sbjct: 465 EIEHRKQEEVLKRFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRAR 524
Query: 527 MPQSEYAFLVDSGNQRE--LDLIKNFSKEEDRMNR------EIMDRTSSDAFTCSEERIY 578
+ Y LV +E L + E+ + + + +D +
Sbjct: 525 ATDALYVLLVPQEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHYK 584
Query: 579 KVDSSGAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPAN 633
+D A ++ +SL++RYC+KLP D F P++ D+ C + LP N
Sbjct: 585 PLDGDNAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIREMIVDNKFMYTCSLRLPIN 644
Query: 634 APIHQIV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDE----PML 686
+P+ +V P + A++ A L+ DLH+ ++D LLP +E+ + E P L
Sbjct: 645 SPVKYVVLSYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPAL 704
Query: 687 FSSD----SDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPAD- 738
S++ G R + + L R Y +N +P+ +
Sbjct: 705 PDESKVNFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYLYHINLVLSCPLPEEQNT 764
Query: 739 ---RIYRE------FGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIM 781
RIY FG+ +P + + V L L++ V+ + M
Sbjct: 765 RGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQTIVLNE------M 818
Query: 782 QAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS---VDWKII 838
Q ++ +FL +++ L + E+S Y+++PV + S VDW +
Sbjct: 819 QVEKIA-IFLNYTFTNVLRLQQYLMLFDPNASENS----YMIVPVKLDEQSDVIVDWNFL 873
Query: 839 RRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLVYATHK-----KWFYL 892
C+ +R + P+ P ++ + + S ++++ ++ ++FY
Sbjct: 874 -ECIYK----------NRNAGPTKVPEEIRKNFKFDASKYHDAVIMPWYRSQDQPQYFY- 921
Query: 893 VTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----N 948
V I N S + D S+ ++ + Y I +++ QPLL N L N
Sbjct: 922 VAEICTNLNPKSSFPGDDYSTFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPRYVN 981
Query: 949 RK-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENL 999
RK E+++ + E E L ELC I F + LP I++R+ L
Sbjct: 982 RKGVALPTSSEETKRAKRENLEQKQILVAELC--AIHPFPASLWRQAVCLPCILYRINAL 1039
Query: 1000 LVAIELK 1006
L+A +++
Sbjct: 1040 LLANQIR 1046
>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1400
Score = 192 bits (488), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 181/663 (27%), Positives = 301/663 (45%), Gaps = 80/663 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ ++++ENIIV + TG GKTHIA+ I A + R + FLAP+ L +
Sbjct: 23 RSYQTEMVDRSLKENIIVAMDTGSGKTHIAIARIR--AEVERLRDNRLVWFLAPSRTLAE 80
Query: 120 QQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ + ++ + G ++ T G ++ W+ + +V++ P +L L H F+
Sbjct: 81 QQYRALDLELSAYGVRLLTGADGVEKWTDQRLWDAVLTNIKVVIATPAVLKDALAHGFVT 140
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGASAQ 233
+ +AL +FDE H K+ P +IM+ FY+P + VP I G++ASPV
Sbjct: 141 ISRLALCVFDEAHRCTKKA--PMNQIMQLFYRPARERGEPVPHILGLSASPVTSVKQGGL 198
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ +++SL + K + E LE V+ P + ++ + T+S+ + + +A
Sbjct: 199 ETIESNLHSLA--VTPKTHRTE----LEKHVNLPELLTIRFSE--SHTASNRLCDALAVA 250
Query: 294 ----EIKREQYISALSRKLHDH-----------------QSLRNTTKQLNRLHDSMKFCL 332
++ R+ Y AL+ + D Q LR + RLH + +
Sbjct: 251 ARSYDLARDPYFVALTGQHDDRSRKILQQVQLKQETYCLQQLRALDTRAARLHKQLGPSM 310
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ + +S + + +L EAE + E+F + + G A
Sbjct: 311 AQWYISTCIRRFRQGMSSENFLMPDLSEAERKHL-----------LEIFEDVEQHAGPAV 359
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA- 451
L ++ S+K L+ IL + + C++FV + V AL+ +L+ + L
Sbjct: 360 ALGTVD--DTLVISEKARLLLQILLQ-HAEPGVHCLIFVEQRVQVTALAELLRRVPALED 416
Query: 452 SWRCHFLVGVN---------AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
S++ VG + A L ++S + L+ FR G N++VAT V EEG+DI
Sbjct: 417 SYKIAGFVGTSTNTNRKISVADLVALSDQSKD--LQAFRDGHKNVMVATNVLEEGIDISA 474
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM 562
C LVI FD P+ + SF+Q RGRAR S+Y V + + K +S E M M
Sbjct: 475 CNLVICFDAPKNLVSFVQRRGRARRTDSKYFLFVSENESAKGN--KPWSALEAEMKAMYM 532
Query: 563 DRTSSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCS-KLPH-DEFFNPKPKFYYF 618
D + SE+ R+Y V S+GA ++ +S L+ +CS H + + + +P+F
Sbjct: 533 DDSRQLQLRPSEKPPRVYGVASTGAMMTMDDAMSHLYHFCSVSTKHANNYIDLRPEFE-- 590
Query: 619 DDLGGTICHIILPANAPI-------HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
L + P+ H P + E A KDA L+A LH+ G +ND
Sbjct: 591 TSLNEITTRWSASVDLPMTVHPSVRHANSAKPWETEEEAIKDAALEAYIALHRAGLVNDN 650
Query: 672 LLP 674
LLP
Sbjct: 651 LLP 653
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 176/418 (42%), Gaps = 86/418 (20%)
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+ +PSI++RLE L+ ++ L+ + + A ++ +A+++ E RLE LG
Sbjct: 892 AFVPSILYRLETSLL---VRDLMETALKDIALTDHALIKEAISSPAAGEPTDYNRLEYLG 948
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D LK+ + H E LT R V NSNL K A L YI +PF
Sbjct: 949 DCVLKHYTELQVMSQHTDWPEAYLTLERDRIVRNSNLAKAALERELDKYILTEPF----- 1003
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA- 1165
GR+ P V+ + KT+ADVVEAL+GA
Sbjct: 1004 --TGRKW-------------------RPPYATEHVKDQAAKRQMSTKTLADVVEALIGAA 1042
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNIC----ISSKSFLPLSASLDMATLEILLGH 1221
+++ KA + I+V + +N C I+ + P++ L LE L+GH
Sbjct: 1043 YLEGDTEKA------FQCIRVLLPQEKWSNDCFETLIAELTACPVANVL---LLETLIGH 1093
Query: 1222 QFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
F H LL++A H S N+ G Y+RLEFLGD+VLD +IT L+S KLK QL +
Sbjct: 1094 TFSHPTLLVEATTHGSCPANKTGMSYERLEFLGDSVLDMIITPKLFSHPRKLKHWQLHSV 1153
Query: 1280 RSMLVN-------------NQAFANVAVDQS-------------FYKFLIFDSNV----- 1308
+ LVN NQ ++ S Y+F+ + V
Sbjct: 1154 HAALVNSHLLGYCCLRYYINQEMFDIVQTTSGNYDSVSARRKTHLYEFMRAGAQVNNITC 1213
Query: 1309 --------LSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNL 1358
S I + + I V P PK DLVES LGAI +D+ NL
Sbjct: 1214 QAVEHFHECSSQIEKALAHGIEYPWVELVTLSP--PKFFCDLVESILGAIFIDTHGNL 1269
>gi|345494561|ref|XP_001602524.2| PREDICTED: endoribonuclease Dicer [Nasonia vitripennis]
Length = 1450
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 180/622 (28%), Positives = 289/622 (46%), Gaps = 108/622 (17%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTV 115
AR YQ+ L +K +E+N I+YL TG GKT+IAVLL+ L+ +++ IF+ TV
Sbjct: 11 ARPYQIYLYEKTIEQNSILYLPTGSGKTYIAVLLVKRLSGDVQRQYTEGGKRTIFIVNTV 70
Query: 116 ALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
ALV QQ + G + + G S +W KEI+ +VLVM QI L L H +
Sbjct: 71 ALVVQQTAFLTRHTGLVCKGYSGDMGVDFWSKEEWRKEINTNQVLVMTAQIFLNLLTHGY 130
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
I ++ I LLIFDECH A VK +HP +IM+ F K+PR+ M+AS + A
Sbjct: 131 ISLDKINLLIFDECHRA-VK-DHPMRQIMQRFQDYPKEKLPRVLAMSASLL-------NA 181
Query: 235 NLP-----KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP-----VINDTSSS 284
N+P ++ LE AK+ +VE + + ++P V Y ++N+ S+
Sbjct: 182 NVPLGKIETTLRELEVTFQAKIITVESLAYVTDYATNPKEFVEYYETPHKISLLNEISAI 241
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLR-----NTTKQLNRLHDSMKFCLENLGVCG 339
S L ++ L ++ + +S + T +LNR+ ++ L ++G+ G
Sbjct: 242 VEYASSILKQV-------VLPNRMENPESSMIFKPVSKTIKLNRILSDVEEHLTDMGLYG 294
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
G E++ +I+ E L RF + AI D I + L I+
Sbjct: 295 ----------GSESVLQHIIQLE------CLKRFGDEKE----AIAMFDFIITQLVKIQK 334
Query: 400 LK-------------EPFFSKKLLRLIGILSTFRLQQHMK----CIVFVNRIVTARALSY 442
L + F S K+L+L+ +L TF K CI+FV R TA+ L
Sbjct: 335 LLSDAMNEVQLPDTIQRFSSSKVLKLMEVLKTFYNNMENKRNFCCIIFVKRRFTAKVLYQ 394
Query: 443 IL-------QNLKFLASWRCHFLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLV 489
+L ++ +FL + ++VG + +R + +L KFR+G N +V
Sbjct: 395 LLSKLSSCDEDFQFL---KPQYMVGYSNNPYKNARETVCIAKWNDEVLTKFRNGVANCVV 451
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKN 549
AT V +EG+DI +C L++R+ P ++IQS+GRAR S + L S E D I
Sbjct: 452 ATDVVDEGVDIPSCTLIVRYYAPMDFRAYIQSKGRARHSTSHFIILASS----EDDYISR 507
Query: 550 FS--KEEDRMNREIMDRTSSDAFTCSEERI-----------YKV-DSSG--ACISAGYGV 593
+ ++ +R R+ + S S + Y V D++G + I+ +
Sbjct: 508 YRSFQQTERFLRQALHGKSDYRIKPSNNDVDALLYQYVIQPYIVKDANGTISVITEQSAI 567
Query: 594 SLLHRYCSKLPHDEFFNPKPKF 615
SL++ YC+ L +F P +
Sbjct: 568 SLINEYCANLVKSKFIMLTPTW 589
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 217/438 (49%), Gaps = 62/438 (14%)
Query: 1008 LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDE 1067
+L++S P G S +L++LTT+ + F+LER+E LGD+FLK+A+ L+ + T E
Sbjct: 1009 MLTSSNPYGP--SPVDILQSLTTKVKNDVFNLERVETLGDSFLKFAISLFLYQAYPTCGE 1066
Query: 1068 GELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETER---- 1123
G LT + V N NL + + N+ + + F P F ++ R
Sbjct: 1067 GPLTHLKGKLVGNLNLFYCSKQKNIAGRMHVEDFAPTGNFVTPAYAAHQVLQQILRAEKV 1126
Query: 1124 TIHSQYDGRAP-------------DDL----------NAEVRCSKGHHWL-----HKKTI 1155
+ + Y+ R P D+ + +V + H+L K++
Sbjct: 1127 SANILYEIRVPAAERFSGCISNNTTDMMQDKVLAWPSDEKVTHTGMEHFLGIQVVSDKSV 1186
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV------EFEASQVTNICISSKSFLPLSAS 1209
+D EAL+G ++ G K A LKW I ++ S+V N + ++
Sbjct: 1187 SDCTEALIGTYLLHLGIKGALQILKWFEILPKSLNVDQYLYSEVENPQLGDGD---VNVH 1243
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
+ A T+E LG++F +R LLQAF HPS+ NR YQRLEFLGDAVLD+L+T ++Y
Sbjct: 1244 IPWAQTMEERLGYKFRNRAFLLQAFTHPSYMPNRQTASYQRLEFLGDAVLDFLLTIHIYE 1303
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYM 1320
L PG+LTDLRS LVNN FA +AV + L+ + L + I+ +V +Y
Sbjct: 1304 TCGNLSPGELTDLRSALVNNITFACLAVRYGLHTALLALAPKLFDLIDKFVKFQENRNYK 1363
Query: 1321 ITPSSTREVKEGPRC--------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DP 1371
I + E C PKVLGD+ ES +GAI LDSG NL VW+++ + + +
Sbjct: 1364 IDDELLWVLLEEEECNMAEHVDVPKVLGDIYESVIGAIFLDSGKNLEVVWQVIYNLMKNE 1423
Query: 1372 ILKFS-NLQLNPIRELLE 1388
I FS N+ PIR + E
Sbjct: 1424 IDLFSKNVPKQPIRVIHE 1441
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 821 YLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
+L++P I + ++W I+ R K + S P + N ES+ + +
Sbjct: 722 FLVVP-INERGQINWDIVNR---------------YKIIASISPSE--NLVVKESEYDLA 763
Query: 881 LVYATHKKW-FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPL 939
LV ++ Y+VT + S + SD +S+V + + I +K+P QP+L KP+
Sbjct: 764 LVTPNYRASNMYIVTQVCEYLKAESSFPTSDYNSYVHYFKERHYIEIKNPAQPMLEVKPI 823
Query: 940 FRLRNLLHNRKLEDSESHE-----LEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMH 994
N R ++ + S E++ + L PELC I F + LPSI+H
Sbjct: 824 SSKINCTKPRSIKANLSKRKRASLTEDFEEHLVPELCDR--IDFPSLYWLKATTLPSILH 881
Query: 995 RLENLLVAIELK 1006
R+ L+ A EL+
Sbjct: 882 RISQLIAAEELR 893
>gi|340727238|ref|XP_003401955.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like [Bombus
terrestris]
Length = 1957
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 218/474 (45%), Gaps = 105/474 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1423 SPSLILQALTMSNANDGINLERLETIGDXFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1482
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFALGRRCPRICSKETERTIHSQYDGR 1132
N NL +L + L + + +P D PC ++ + T+ +Q D
Sbjct: 1483 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPC-YYVPKELEQALIESGVPSTLWNQADIP 1541
Query: 1133 A-----PDDLNAEVRCSK---------------------------------GHHWLHKKT 1154
A P ++ VR ++ H + K+
Sbjct: 1542 ALQAVNPSEITQLVRETEQKLGVMKTELDRNETSLSNNLDNMRCFIPYNLITQHSIPDKS 1601
Query: 1155 IADVVEALVGAFIDDSGFKAATAFLKWIGIQV---------------------------E 1187
IAD VEAL+GA++ G + A F+ W+GI V
Sbjct: 1602 IADCVEALIGAYLIACGSRGALLFMAWLGIHVLPTEEITIIQESEPRERVPGSTPYIKGT 1661
Query: 1188 FEASQVTNICISSKS----------FLP-----LSASLD-MATLEILLGHQFLHRGLLLQ 1231
E Q T I ++P L LD LE +G++F LLQ
Sbjct: 1662 NEKGQTTWTQIRYGKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKSIGYEFHDISYLLQ 1721
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
AF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN F
Sbjct: 1722 AFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALVNNTIF 1781
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPK 1337
A++AV F+K+ S LS IN +V +Y + E E PK
Sbjct: 1782 ASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPK 1841
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
LGD+ ES GAI LDSG +L+ VW + + + + I +FS N+ +PIRELLEL
Sbjct: 1842 ALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLEL 1895
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 151/659 (22%), Positives = 273/659 (41%), Gaps = 108/659 (16%)
Query: 428 IVFVNRIVTARALSYIL-------QNLKFLASWRCHFLVGVNAGLKSMSRN------AMK 474
++FVN+ A+ L Y+L ++L+FL+ + + N S S++ +
Sbjct: 441 VIFVNKAFVAKVLFYLLNEISMHDEDLRFLSPL---YTIERNIEDISYSKDLEIEHRKQE 497
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR E NLL++T + EEG+DI C V+R+D P+T S++Q + RAR + Y
Sbjct: 498 EVLKRFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKTRARATDALYVL 557
Query: 535 LVDSGNQRE--LDLIKNFSKEEDRMNR------EIMDRTSSDAFTCSEERIYKVDSSGAC 586
LV +E L + E+ + + + +D + +D A
Sbjct: 558 LVPQEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHYKPLDGDDAP 617
Query: 587 -ISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPANAPIHQIV- 640
++ +SL++RYC+KLP D F P++ D+ C + LP N+P+ +V
Sbjct: 618 KVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMVVDNKFMYTCSLRLPINSPVKYVVL 677
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP---------QEDNATEDEPMLFSSD- 690
P + A++ A L+ DLH+ ++D LLP ED P D
Sbjct: 678 SYPMPNRAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDESKVDF 737
Query: 691 SDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPAD----RIYRE 743
S++ G R + + L R Y +N +P+ + RIY
Sbjct: 738 SEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYLYHINLVLSCPLPEEQNTRGRRIYPP 797
Query: 744 ------FGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEM 789
FG+ +P + + V L L++ V+ + MQ ++ +
Sbjct: 798 EESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQTIVLNE------MQVEKIA-I 850
Query: 790 FLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS---VDWKIIRRCLSSPV 846
FL +++ L + E+S Y+++PV + S VDW + C+
Sbjct: 851 FLNYTFTNVLRLQQYLMLFDPNASENS----YMIVPVKLDEQSDVIVDWNFL-ECIYK-- 903
Query: 847 FGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLVYATHK-----KWFYLVTNIVFEK 900
+R + P+ P ++ + + S ++++ ++ ++FY V I
Sbjct: 904 --------NRNAGPTKVPEEIRKNFKFDASKYHDAVIMPWYRSQDQPQYFY-VAEICTNL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK------ 950
N S + D S+ ++ + Y I +++ QPLL N L NRK
Sbjct: 955 NPKSSFPGDDYSTFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLTPRYVNRKGVALPT 1014
Query: 951 -LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
E+++ + E E L ELC I F + LP I++R+ LL+A +++
Sbjct: 1015 SSEETKRAKRENLEQKQILVAELC--AIHPFPASLWRQAVCLPCILYRINALLLANQIR 1071
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 124/309 (40%), Gaps = 29/309 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK-----PQKSICIFLAPT 114
R+YQ+EL A + +IIV LG +T I + LI E A R+ ++S+ I
Sbjct: 17 REYQVELFYAAKDRDIIVCLGKNYEQTFIVIKLIQEFATNNRRLLSEGGRRSLFILTDEE 76
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYE---VLVMIPQILLYCLY 171
+ +A I++ KV C C + I+ +E VLV + L
Sbjct: 77 KCTI--KASYIQQLTDLKV-LLCDT-------CSVTEFIENFETSHVLVTTGKTCAQLLT 126
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
R I I L+I DECH + N+ I++ + VPRI G+ A P+
Sbjct: 127 DRKILPCQINLVIIDECHKS--IDNNELKFILQTILACE--NVPRIIGL-AVPLFNLTQE 181
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP----VINDTSSSYVT 287
L I +EN +V + D + + P V +Y ++ T +Y+
Sbjct: 182 P-GRLGLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKNEKGKLHTTIENYIL 240
Query: 288 CSEQLAEIKREQYISALSRKLH-DHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+ + R + + + D Q + + T++ + + LE LG A A+
Sbjct: 241 HALEFLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLYILETLGPWCADRAALA 300
Query: 347 LLSGDETMR 355
LL E ++
Sbjct: 301 LLILTEKLK 309
>gi|326475978|gb|EGD99987.1| hypothetical protein TESG_07315 [Trichophyton tonsurans CBS 112818]
Length = 1435
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 188/670 (28%), Positives = 311/670 (46%), Gaps = 74/670 (11%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQ+E+ ++++NIIV + TG GKT IA+L I L R + FLAP V L
Sbjct: 57 SRGYQIEMLDASIKQNIIVAMDTGSGKTQIAILRIRH--ELERCSNDKLVWFLAPKVPLA 114
Query: 119 QQQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ + I + + ++ + G +R + W+ + ++V PQILL L + FI
Sbjct: 115 EQQYRAISQQLPAYQTKILTGADNLERWSTQKIWDAFLLNTRIVVSTPQILLDVLSNGFI 174
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV------PRIFGMTASPVVGKG 229
+ IALL+FDE HH VK++ P KIMK+FY I ++ P I G+TASP
Sbjct: 175 TLRRIALLVFDEAHHC-VKAS-PENKIMKNFYHARIDQLSETNDLPSILGLTASPT---- 228
Query: 230 ASAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSP-VVRV-YQYGPVINDTSSSY 285
S+ LE L A K S E++ +V P ++++ YQ I
Sbjct: 229 ---SKLTEDSLRQLEQNLHACCKTPSFHH-EEMMQYVHIPELLKISYQKDSTIPHNMEMK 284
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC------- 338
+I+ + + + + ++ R + ++ R D CL+ L C
Sbjct: 285 FLSMLNDIDIESDPFF-----QRYKGKTDRKSIERFMRARDRKTPCLDQLKRCFTRVSHI 339
Query: 339 -GAL--HASYILLS----GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
G L AS +S R +LI+ + D F A + AI
Sbjct: 340 YGELGHWASSTFISEIYRRTREKRAKLIDQSWSEWDRDDSSFLCNALKPVVAIIGERCWN 399
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
S + S+K+ L+ +L++ L + I+FV + TA LS+++ + LA
Sbjct: 400 STPDAV--------SQKVEHLVDLLAS-ELTGTSRGIIFVEQRATAVMLSHLISHYPELA 450
Query: 452 SWRCHFLVGVNA------GLKSMSRNA-MKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ +G +A + +S+ MK+ ++ +SG+ NLLVAT V EEG+D+ C
Sbjct: 451 HIMPDYFLGNSAFSDRKADITELSKPGDMKNSIDDLKSGKKNLLVATSVLEEGIDVSACD 510
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNREI 561
LV+ FD P+ + SF+Q RGRAR S++ D+ ++ + +++ KE N+E
Sbjct: 511 LVVCFDPPKQLRSFVQRRGRARKQSSKFVIFYAEDDTATHKDWEAMEDIMKERYFNNKEF 570
Query: 562 MDRTSSDAFTCSEERI-YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--- 617
+DR + E +++S+GA ++ S L +CS LP EF + +P F
Sbjct: 571 IDRLREEDDEEDVEYESLRIESTGALLTLENARSHLSHFCSTLPC-EFTDTQPDFIISNS 629
Query: 618 -FDDLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLL 673
D+ ++LP + + G E AK+DA +A L+K G +ND+L+
Sbjct: 630 GIKDM--LTAKVLLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYKAGLVNDHLM 687
Query: 674 PQEDNATEDE 683
P+ T++E
Sbjct: 688 PEHCRTTDEE 697
Score = 103 bits (257), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 171/409 (41%), Gaps = 68/409 (16%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+PS++H + L+A EL + + P G + + +++L A+T +E + +RLE LGD
Sbjct: 951 FIPSLIHTIGRYLLAEELSQTILS--PVGFQ-NIQLVLTAITATSAREDTNYQRLEFLGD 1007
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK L H EG L++++ + V+NS L K A L +I F ++
Sbjct: 1008 SALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILTTCFTGAKWR 1067
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
L Y+ D NA K L KT+ADVVE+L+GA I
Sbjct: 1068 PL-------------------YNSTYAD--NAGKIGEKSTRELSTKTLADVVESLIGAAI 1106
Query: 1168 DDSG----FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQF 1223
D G + FL I Q E ++ + S+ F M+ +E L+ + F
Sbjct: 1107 IDGGENKVLRCLELFLPEINWQPSGERIEI--LFDSAPDFNDDCPRDIMSKIEPLIDYSF 1164
Query: 1224 LHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
+ LL + HPS YQRLEFLGD++LD ++T L+ ++ + +R+ L
Sbjct: 1165 TKKALLATSLSHPSNLISRMTYQRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTAL 1224
Query: 1284 VNNQAFA----NVAVD----------------------QSFYKFLIFDSNVLSETINNYV 1317
VN A N + D S ++++ S + ET
Sbjct: 1225 VNADFLAFLCMNTSTDVTREDVCVSPTGEVEVTSSTHQVSLWQYMSHSSTDIVETQQAIA 1284
Query: 1318 DYM--ITPSSTREVKEGP----------RCPKVLGDLVESSLGAILLDS 1354
+ + ++ G PK D++ES LGAI +DS
Sbjct: 1285 RTFEELRDQIEKALRSGASYPWTLLSTLNAPKFFSDIIESILGAIFIDS 1333
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
YQRLEFLGD+ L + L + +P G L+ + +V+N AVD +F++
Sbjct: 999 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1058
Query: 1304 --FDSNVLSETINN-YVDYM--ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F N+ Y D I STRE+ K L D+VES +GA ++D G N
Sbjct: 1059 TCFTGAKWRPLYNSTYADNAGKIGEKSTRELST-----KTLADVVESLIGAAIIDGGEN 1112
>gi|189199432|ref|XP_001936053.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983152|gb|EDU48640.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1439
Score = 191 bits (485), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 185/663 (27%), Positives = 307/663 (46%), Gaps = 61/663 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR--KPQKSICIFLAPTVAL 117
R YQ E+ +++M+ NIIV + TG GKTHIA+ + KP I FLAPTV+L
Sbjct: 25 RAYQAEMVEESMKANIIVVMDTGSGKTHIAIERTRAELETCQPDKPTWKIVWFLAPTVSL 84
Query: 118 VQQQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
+QQ +V ++ GF + CG + + W+ + ++V Q+LL L H F
Sbjct: 85 CEQQHEVFLSNLPGFGHQILCGRDDIEFWTTQRHWDSILTNVRIVVSTHQVLLEALTHGF 144
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+K+ +ALLIFDE HH + NHP ++M +FY P + +P++ G+TASPV+ A
Sbjct: 145 VKLTKLALLIFDEAHHCTL--NHPANQLMTNFYMPQLHDNRNSLPKVLGLTASPVMKAVA 202
Query: 231 SAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSP--VVRVYQYGPVINDTSSSYVT 287
+ Q + +E L A + + +L +V P V Y P S +
Sbjct: 203 TRQG-----LELIEQNLHATAKTPKLHRSELMRYVHQPELVQIAYPSSPAGTHYSQLLLA 257
Query: 288 CSE--QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK-FCLENLGVCGALHAS 344
E + ++R+ Y+ AL L H + ++QLN+L S K +C + L +
Sbjct: 258 LQEAYETYNLQRDPYVIAL---LDQHSKGYDVSRQLNKLWSSRKTYCYDQLKQLKNKAEA 314
Query: 345 YILLSGDETMRNEL------IEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
G M L E D L ++ + + +R + + S +
Sbjct: 315 MADELGTSVMEGYLRQCIATFEKMAGIFDQQLLDLSTNERQHLLNVFKRFPLHNPSSVSD 374
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ---NLKFLASWRC 455
+ + K + + +++ +VFV + V +L+ IL K L R
Sbjct: 375 GILDNLSQKVNILVDTLVAEAEGNPDFTGLVFVEQRVWVASLAEILTCHPRTKHLL--RV 432
Query: 456 HFLVGVNAGLKSMSRNAM-------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
VG + K S ++ ++ L+ FR+G +NL++AT V EEG+D+ +C LVI
Sbjct: 433 GTFVGTSQSSKRKSNISVFAEPKNQQTTLDDFRAGIINLVLATSVLEEGIDVSSCHLVIC 492
Query: 509 FDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNREIMD---- 563
F+ P+ + SF+Q RGRAR +S Y F+ D+ N + +K++ E M R D
Sbjct: 493 FEQPKNLKSFVQRRGRARQQRSRYLVFVPDNSNVQS---VKSWQSLEAEMRRAYEDDKRK 549
Query: 564 -RTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
R + + E ER +++S+GA ++ LH +C++L + N P+F + D
Sbjct: 550 VRLAQEQEQVDEYGERHLRIESTGALLTLENASQHLHHFCARLGSGTYANITPEFDFTHD 609
Query: 621 LGGTICHIILPANAPIHQIVGTPQS-----SMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
G + LP + + V T +S + A+KD +A + L+ +ND LLP
Sbjct: 610 RGQITAKVTLPIS--VDPKVRTARSLKTWVTERMAQKDVAFEAYKALYHTKLVNDNLLPV 667
Query: 676 EDN 678
D+
Sbjct: 668 RDD 670
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 204/459 (44%), Gaps = 72/459 (15%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIM 993
++A L + R+ LH D+++ E ++L C ++ + S I L PSI+
Sbjct: 874 IQAVRLPKRRDFLHPVSEHDNKN-EAYTRIENLVASACTVENLPVSYAIFGLL--FPSIV 930
Query: 994 HRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYA 1053
H+LE +VA L+ L E + +L+ ALT+ E +RLE LGD LK+
Sbjct: 931 HKLEIYIVADTLRTTLLNPV-EVDNLHLPILVTALTSSALNEGNDYQRLEFLGDCILKFI 989
Query: 1054 VGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRC 1113
HL + + EG LT ++ V+N L + L YI + F ++
Sbjct: 990 ASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFHKRFTGAKWR------ 1043
Query: 1114 PRICSKE-TERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
PR S+ E T+ + + + K IADV+E+L+GA GF
Sbjct: 1044 PRYISQVLAESTLPEKQEKSS-------------------KLIADVIESLIGASYIIGGF 1084
Query: 1173 KAATAFLK-WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
A A ++ + ++ S+ +I + SL + +E LLG++F ++ LLL+
Sbjct: 1085 PKAFACVQTLLPLERWTPLSEAKDILYDAAPHQDTVMSLGL--VEKLLGYKFTNKALLLE 1142
Query: 1232 AFVHPSFNRLG-GC-YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN--- 1286
A H +F L C Y+R EFLGDAVLDY+++ L++ P+L ++ +R+ +VN
Sbjct: 1143 ALTHVTFRGLNTNCSYERHEFLGDAVLDYIVSRRLFAHKPELSHRKMHGIRTAMVNASFL 1202
Query: 1287 --QAFANVAVDQ--------------SFYKFLIFDSNVLSETINNYVDYMITPSSTREV- 1329
F D+ + ++FL SN L + + + + RE+
Sbjct: 1203 AYSMFETTVTDELTNKDTLEPEVHHRALWQFLRSTSNAL---VASRIVATQQHAEAREII 1259
Query: 1330 ----KEGPRC----------PKVLGDLVESSLGAILLDS 1354
K R PK L D+VES +GA+ +DS
Sbjct: 1260 ATGLKHDSRFPWHALSLTDPPKYLSDIVESVIGALYIDS 1298
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 1224 LHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
LH +L+ A + N G YQRLEFLGD +L ++ + +L + ++ G LT + L
Sbjct: 955 LHLPILVTALTSSALNE-GNDYQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKL 1013
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLV 1343
V+N A + +++ ++ Y+ ++ S+ E +E + K++ D++
Sbjct: 1014 VSNGYLARATLAAGLDQYIFHKRFTGAKWRPRYISQVLAESTLPEKQE--KSSKLIADVI 1071
Query: 1344 ESSLGAILLDSGF 1356
ES +GA + GF
Sbjct: 1072 ESLIGASYIIGGF 1084
>gi|342872111|gb|EGU74508.1| hypothetical protein FOXB_14953 [Fusarium oxysporum Fo5176]
Length = 1500
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 186/644 (28%), Positives = 290/644 (45%), Gaps = 69/644 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A E N++V L TG GKT I+ LL+ EL K + FL
Sbjct: 82 REYQIELFERAKERNLLVVLPTGTGKTLISALLLRHHLEQELEARAIGKLKKVAFFLVEK 141
Query: 115 VALVQQQAKVIEESIG-FKVRTFCGGSKRL-KSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
VAL QQ V+ ++G V F G K + K+ W+++ + V+V QILL CL
Sbjct: 142 VALCVQQHAVLSCNLGAHPVTKFVGHMKGMTKTKEYWDEKFGENMVVVCTAQILLDCLTC 201
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
FI M I LLIFDE HH K HPYA+IM +Y + PRI GMTASPV +
Sbjct: 202 GFITMSRINLLIFDEAHH--TKKKHPYARIMDGYYCKHEGEKPRILGMTASPVDAR---- 255
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
++ + LE LD+++ ++ D +E+ + R Q +N S + +
Sbjct: 256 TKDVRDTALELERSLDSQIATISDEVLMET-----MHRKKQTEETVN---YSRLEAPDDT 307
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
EQ + +SR + +++F E V G A
Sbjct: 308 KTHLWEQIFALVSRN--------------EQFKLTLEFTKEASSVLGTWCADRYWELAMT 353
Query: 353 TMRNELIEAEGNT--IDDSLCRFASQASEVFAAICRRDGI--ASDLSCIEVLKEPFFSKK 408
+ E + A + I D A A+E A+ R I A I+ E S K
Sbjct: 354 DLETERLAARTSREFIGDIAVTRADLATE---AVRRVQEIVQAHKFGAIDPKAEG-LSAK 409
Query: 409 LLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVG---VNA 463
+ L ILS F + +CIVFV + TAR LS + Q + ++VG N+
Sbjct: 410 VKSLHEILSHAFTMDGTKRCIVFVEKRYTARLLSDLYSQPSMRIPGMSASYMVGCQSTNS 469
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
+MS L +F+ G N L T V EEG+D+ C LVIRFDL +V ++QS+G
Sbjct: 470 SFGTMSFREQVLALHEFKRGNTNCLFTTPVAEEGIDVPDCDLVIRFDLYNSVIQYLQSKG 529
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKNFSKE-------------EDRMNREIMDRTSSDAF 570
RAR +S Y +++ GN + K ++ + +++ +++D
Sbjct: 530 RARQARSRYITMMEEGNLTHIRSAKQALRDSQALEKFCLPLSADRKLHDDLIDEDMEMMV 589
Query: 571 TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT-ICHII 629
+ ++Y++ S+GA ++ + +L R+ S L + + Y +G + ++
Sbjct: 590 ERMQHQVYEIPSTGARLTFPASLEILARFVSHLSTGSYAKVE---YQVQKVGDRYLADVV 646
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKA----IEDLHKLGALN 669
+P +P++ + GT Q S AK A +A I D H G L
Sbjct: 647 MPLQSPVNFVKGTQQRSKLLAKCSAAFEACKILIRDKHVDGNLQ 690
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 222/496 (44%), Gaps = 93/496 (18%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+++A+ L RNLL ++++ + E F L P L + D+ S P
Sbjct: 936 QPVVKAELLSLRRNLLDEFEVDEKVNMEC---FIILEP----LHVSPLPIDVVSMAMAFP 988
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT----------TEKCQERFSL- 1039
+I+HR++++L+ ++ +LL P E+ L+A+T TE+ + +
Sbjct: 989 AIIHRIDSVLIVLDACNLLDLEIP------PELALEAMTKDSDNSGEHDTEQINFQTGMG 1042
Query: 1040 ---ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGD FLK A ++ L +E + R + N NL A LQ ++
Sbjct: 1043 DNYERLEFLGDCFLKMATTISIYTLMPDGNECKYHVERMLLICNQNLFNHAVDRKLQEFV 1102
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R + FD ++ P + K+ G+AP + H L KTIA
Sbjct: 1103 RSKAFDRRTWY------PDLPLKK----------GKAPK--------TSMKHNLADKTIA 1138
Query: 1157 DVVEALVGAFI-------DDSGFKAATAFLKWIGIQVE-----FEASQVT-----NICIS 1199
DV EAL+GA D KA T K +++ ++A +V N S
Sbjct: 1139 DVCEALIGAAYLTSKASNMDLAVKAVTRMTKSKNHRMKAFKDYYKAYKVPEWQEGNASAS 1198
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDY 1258
+S + A AT G++F L+ AF HPS+ YQRLEFLGD++LD
Sbjct: 1199 QRSLVQKVAQ---AT-----GYRFKSAQLVQSAFKHPSWPYESVPDYQRLEFLGDSLLDM 1250
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
I YLY +P+ P LT+ + +V+NQ + V ++ L+ ++ L I +YV
Sbjct: 1251 AIVDYLYQNFPRADPQWLTEHKMAMVSNQFLECLCVKLGLHQHLLSSTSSLLSQIRDYVV 1310
Query: 1319 YM--ITPSSTREVKE--GP----------RCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
+ ++ +E KE P PKV D++E+ +GA+ +DS + + V
Sbjct: 1311 ELEVAEENAHKEAKEVGTPMRKDFWLKVGSAPKVYADVIEALVGAMFVDSKYKFSVVENF 1370
Query: 1365 MLSFLDPILKFSNLQL 1380
F+ P F +++L
Sbjct: 1371 FTKFIQPY--FQDMRL 1384
>gi|195424855|gb|ACF96960.1| dicer-1 [Litopenaeus vannamei]
Length = 2473
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 211/450 (46%), Gaps = 80/450 (17%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ L+ + EG+L+ RS V+
Sbjct: 1961 SPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVS 2020
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPC-QFFALGRRCPR----------------------- 1115
N NL +L R L + F+P + G PR
Sbjct: 2021 NLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPG 2080
Query: 1116 ---ICSKETERTIHS---QYDGRAPDDLNAEVRCSKG--------------HHWLHKKTI 1155
+ S E R + Q + +E+ ++ H + K+I
Sbjct: 2081 LHDLASDEIRRLVQERSEQIKRSKSEQATSELMATQNPHDPPIFIPYNLLTQHSIPDKSI 2140
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICI---------SSKSF 1203
AD VEAL+GA++ G + A F+ W+GI+V E+S I S
Sbjct: 2141 ADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEACELITYGHLESPQSPPYH 2200
Query: 1204 LPLSAS---LDM-----ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
PL+ + LD+ E +G+ F R LLQA H S+ NRL CYQRLEFLGD
Sbjct: 2201 CPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQASTHASYYKNRLTDCYQRLEFLGD 2260
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S I
Sbjct: 2261 AVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGPDRVI 2320
Query: 1314 NNYV------------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
++V +Y RE E PK LGD+ ES GAI LDSG +L+ V
Sbjct: 2321 RDFVKMQEENGHKINEEYYFMEEDEREAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAV 2380
Query: 1362 WKIMLSFLDP-ILKFSN-LQLNPIRELLEL 1389
W + + + P I +FS + +PIRELLE+
Sbjct: 2381 WSVYYTMMCPEIERFSGVVPKSPIRELLEM 2410
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 150/652 (23%), Positives = 260/652 (39%), Gaps = 99/652 (15%)
Query: 428 IVFVNRIVTARALSYILQNLKFLA---SWR-CHFLVGVNAGLKSMSRNA------MKSIL 477
++FV+ A+ + +L+ L + +W + V +K R A + +L
Sbjct: 931 LIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAEHKKQEEVL 990
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR----------M 527
+FR E N+LV+T+V EEG+D+ C LV+RFD P S++ S GRAR
Sbjct: 991 RRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLIT 1050
Query: 528 PQSEYAFLVDSGNQRELD--LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGA 585
E +FL D L+ + E +RE++ SS+A I + A
Sbjct: 1051 KNQEISFLHDMATYSAFQQVLVSHCGSVEVGTDREVL---SSEANAAHAPYITPAE---A 1104
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT-------ICHIILPANAPIHQ 638
++ + LL++YC+KLP D F + +++ C I+LP N+P+
Sbjct: 1105 AVTMASAIGLLNKYCAKLPSDTFTR-LTAMWDVEEIKEAEALTPVYKCKIMLPINSPLKG 1163
Query: 639 IVGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
+ P Q + AK A L+ LH++G L+D L P + + + L + +D E
Sbjct: 1164 TIEGPWQKKVSLAKMAAALECCRRLHQMGELDDQLQPVGKESMKLDDHLCAPPADDQVPE 1223
Query: 698 G-------SRGELHEMLVPAVLRQSWTKSQ---YPVRLNFYFMQFIPDPAD----RIY-- 741
G R + + V L K + +L+ IPD + +IY
Sbjct: 1224 GMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYKLDMVLTCPIPDEQNTRGRKIYRP 1283
Query: 742 ----REFGLFVK------SLLPGEAEHLKVDLHLAR-GRSVMTKLVPSGIMQAQQFQEMF 790
R FG+ S P +V +H+ R V + + Q F +
Sbjct: 1284 EQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKV--NVTQDQLSALQYFHKFT 1341
Query: 791 LKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFH-KNSVDWKIIRRCLS--SPVF 847
+L ++ +F P ++ + FY++ F+ +DW+ ++ S P
Sbjct: 1342 FTHVLRLEKYPIKFDPT-------NARTAFYIVPLNKFNGSEGIDWEFVKEIQSEGDPRP 1394
Query: 848 GTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYK 907
P +K Q + ++ V ++FY V I N S +
Sbjct: 1395 VPPQDDARKK-------FQFQHDLYEDAVVMPWYRNQDQPQYFY-VAEICTHLNPQSDFP 1446
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKL-----------EDSES 956
D+ + + ++ YG+ + + QPLL NLL R + E+++
Sbjct: 1447 DAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTTSEETKR 1506
Query: 957 HELEEYFDD--LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ E L PELC I F + LP+I++R+ LL+A +L+
Sbjct: 1507 AKRENLQQKQILVPELC--TIHPFPASLWRKAVCLPTILYRINALLLADQLR 1556
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
LL H ++LQA + N G +RLE +GD+ L Y IT++LY YP+ G+L+
Sbjct: 1954 LLNHPGPSPSVILQALTMSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2012
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 2013 YLRSKQVSN 2021
>gi|312384317|gb|EFR29067.1| hypothetical protein AND_02261 [Anopheles darlingi]
Length = 1651
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 173/677 (25%), Positives = 316/677 (46%), Gaps = 84/677 (12%)
Query: 50 KTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK---PQKS 106
K + D + R YQ ++ + +N IVYL TG GKT+IA++++ E++H +R
Sbjct: 4 KKEPDEDLVPRDYQQQMKDICLRKNTIVYLPTGAGKTYIALMVMREMSHQLRSNIDDGGK 63
Query: 107 ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQI 165
FLA TVAL +QQA+ F VR + D W E + ++LV QI
Sbjct: 64 RSFFLANTVALAKQQAQFFCRFFPFNVRLYTSEVNVDTWKQDRWLNEFREVQILVSTSQI 123
Query: 166 LLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPV 225
LL L H ++ I L++FDECH A HP IMK+ PR+ G++ + +
Sbjct: 124 LLDILRHGYLSPSNINLIVFDECHRA--VGQHPMHAIMKELMGVPKNCQPRVIGLSGT-L 180
Query: 226 VGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ + ++ + + + LEN A + +V D ++ S S +
Sbjct: 181 LYRELKSKTQVEEELERLENTFSATIATVGDYDEYTSMCS-------------------F 221
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASY 345
T +++ + R ++ ++ + +Q+ ++H K+ L++ AS
Sbjct: 222 STNAQEKICVYRNSFLESVPVIKMVIGMVMKFGEQIEKIHLP-KYSLQS--------AST 272
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRF--ASQASEVFAAICRRDGIASDLSC-IEVLKE 402
+ +S + + + +L F + +SEV+ C + D+ ++V+K
Sbjct: 273 LRVSAPKPTKE---------VKRALNEFQHSCWSSEVY---CVLQSVMKDMPIRVQVMK- 319
Query: 403 PFFSKKLLRLIGILS---TFRLQQHMKCIVFVNRIVTARALSYIL--------QNLKFL- 450
F S ++ R+I L + + + +VFV R +A+ L ++L QNL
Sbjct: 320 -FSSDRVRRMIMYLEQEYSGTVDAEKQALVFVKRRFSAKVLYHVLRLYFGHDEQNLPDED 378
Query: 451 ASWRCHFLVGVNAGLKSMSRNAM-----KSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
A R F+VGVN ++ + + + +++KFR ++N+L AT V EEG+D+Q C +
Sbjct: 379 AIVRPEFIVGVNRPMEESIEHIIVAKHDRQVIKKFRKHQINVLCATNVLEEGIDLQMCNI 438
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDRMNREIMDR 564
V+ FD P + +S++QS+GRARM S Y +V+ ++ + I+ + E+ + + ++ +
Sbjct: 439 VVMFDEPLSYSSYMQSKGRARMKSSTYLLMVNDEDRSKFTARIQLYHDIENTLKKALIGK 498
Query: 565 TSSDAFTCSEERIYK----------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPK 614
T + E + K + +GA + V LL+RYC +P D F
Sbjct: 499 TINRPEPL-EHDVRKELLDDITAPFITPAGAKLDLTSSVQLLNRYCMSMPRDLFTGTNVA 557
Query: 615 FYYFDDLGGTICHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
+ + G + LP + I ++V G P +++ AK+ A + L+++G L+ +LL
Sbjct: 558 WERIEQHGKICVTVKLPLQSTIREVVHGEPMKNLKLAKQSAAFNVCKQLYEVGELSMHLL 617
Query: 674 P--QEDNATEDEPMLFS 688
P +D + E + FS
Sbjct: 618 PVTVKDKVQQVEDLYFS 634
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 210/423 (49%), Gaps = 63/423 (14%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT++ + F+LER E+LGDAFLK++V L + H T EG LT + V+N NL
Sbjct: 1177 ILQALTSKHAHDVFNLERFELLGDAFLKFSVSAFLLMRHVTWHEGYLTTCKGRMVSNRNL 1236
Query: 1084 LKLAARNNLQVYIRDQPFDP-CQFFALGRRCPRIC--------------------SKETE 1122
L A + L + FDP ++ P++ +E +
Sbjct: 1237 LYCAMQYGLPGMQKVHRFDPRNEWLPPLATVPKVIREAMIKAKEMPALLFKLELSEEEVQ 1296
Query: 1123 RTI--HSQYDGRAP------DDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKA 1174
I S+ D P ++ + + H + KT+AD +EAL+G + G++
Sbjct: 1297 SGIVQQSKIDAFLPMIKESEEESRSTLMAVLQHVQVSDKTVADSMEALLGVCVKAVGYER 1356
Query: 1175 ATAFLKWIGIQVEFEASQVTNIC--ISSKSFLPLSASLDMATLEILL----------GHQ 1222
+ L GI + T++ + + + L+ + T++ LL G++
Sbjct: 1357 SFRALSHFGI-----MPRDTDLAKLLRTHEYTVLNYQDERETIDRLLINPEKIERTVGYK 1411
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F +R LLQAF H ++ N L Y++LEFLGDAVLD+LIT Y++ P + PGQLTDLR
Sbjct: 1412 FRNRTFLLQAFTHATYTTNTLTKSYEQLEFLGDAVLDFLITLYIFERNPHMSPGQLTDLR 1471
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY-------------MITPSSTR 1327
S LVNN A V V + +++ S +L++ I+ +V+ ++T S
Sbjct: 1472 SALVNNVTLACVLVRFRLHHYILSQSPMLTDKIDKFVEVQGQKRNRIGDWVRLLTEESET 1531
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD-PILKFS-NLQLNPIRE 1385
+ E PKVLGD+ E+ +GAI LDSG +L T W+I S L I FS + + +R+
Sbjct: 1532 PLAEYVDVPKVLGDVFEALIGAIYLDSGCDLVTTWRICYSLLQREIENFSLDTPIQVVRQ 1591
Query: 1386 LLE 1388
L E
Sbjct: 1592 LYE 1594
>gi|295673975|ref|XP_002797533.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280183|gb|EEH35749.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1450
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 187/672 (27%), Positives = 308/672 (45%), Gaps = 71/672 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHL----IRK-PQKSICIFLAP 113
R YQLE+ + +++ENII+ + TG GKT IA+L I +EL +RK K FLAP
Sbjct: 31 RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCTEDKVRKFGLKEFVWFLAP 90
Query: 114 TVALVQQQAKVIEESIG-FKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
TVAL QQ K+I + + ++ R G K + W+ + ++V PQILL L
Sbjct: 91 TVALADQQHKIISQQLSVYQTRLLLGSDKVHYWSTKKIWDDILLNIRIVVSTPQILLDAL 150
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASP 224
H F+ M I+LL+FDE HH S P IM+ FY + + +P I G+TASP
Sbjct: 151 SHGFVTMSRISLLVFDEAHHCDGFS--PANTIMQRFYHEQLQRTGTKTDLPHILGLTASP 208
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQY--GPVINDT 281
V P+S+ +E L+A+ + E+L +V P + ++ +I+
Sbjct: 209 VTRAD-------PESLKKVEKNLNARCETPRIHREELMRYVHRPELYTVKFRTDSLIHSD 261
Query: 282 SSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL--------- 332
++ +I+++ +I L R+ + R+ K L+ L CL
Sbjct: 262 MLQNLSRIIGTVDIEKDPWIKRLRRQ----EDRRSQEKLLHALEKRKTHCLSQLSKLLRQ 317
Query: 333 -----ENLGVCGALHASYILLSGDETMRNELIEAE-GNTIDDSLCRFASQA-SEVFAAIC 385
++LG A ++ ET R + E +++D F S+ SE+ +
Sbjct: 318 AISVHDDLGPWAADAFISEVIERLETKRGMYQQVEFHSSLDREEEAFISEVLSELSISPV 377
Query: 386 RRDGIASD---LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSY 442
++D + + + +L E S+ GI+ QQ + + I L
Sbjct: 378 KQDWDSESNVVSTKVNLLVELLESEHTADFTGIIFA---QQRATVTMLSHLISKHPRLKD 434
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
I+ + FL C + + + + K ++ RSG+ NLL+AT V EEG+D+
Sbjct: 435 IIVSGAFLGD-AC-YASRTSTITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEGIDVSA 492
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN---- 558
C LV+ FD + + SFIQ RGRAR S++ +DS N E K +++ ED M
Sbjct: 493 CHLVVCFDAIKNLRSFIQRRGRARKEHSKFVMFLDSDNISEE---KQWTRLEDVMKSIYE 549
Query: 559 ---REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF 615
R + D + + ++ +++S+GA ++ L +C+ L H F + +P F
Sbjct: 550 DDMRRLEDNMARENIVEEGDQYLRIESTGALLTLENARQHLEHFCATL-HYAFTDSRPHF 608
Query: 616 YYFD--DLGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALND 670
+ + + G +ILP + I G+ + E A++DA +A L+ G +ND
Sbjct: 609 IFHESKEDGMVAAKVILPNVLDPKFRVIHGSKRWKTERMAQRDAAFQAYLKLYNEGLVND 668
Query: 671 YLLPQEDNATED 682
YLLP ED
Sbjct: 669 YLLPVHWKGDED 680
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 187/457 (40%), Gaps = 90/457 (19%)
Query: 988 LLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L PSI+H++E L+A EL K +LS P G +++ AL +E + +R+E LG
Sbjct: 938 LSPSIIHKVETYLIAEELNKTILS---PVGF-TDLNLVITALCAPDAREATNYQRIEFLG 993
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK+ L + EG L+ + V+N L A L +I F ++
Sbjct: 994 DSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETGLDKFIFVDIFTGVKW 1053
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
R ++++ + D E + KT+ADV+EAL+GA
Sbjct: 1054 ----------------RPLYNKAHVKEQDIPRRE---------MSTKTLADVIEALLGAA 1088
Query: 1167 IDDSG-------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
D G K ++WI A + N LP S D +E L+
Sbjct: 1089 TIDGGQIKVEKCLKIFLPEIRWIPFADRLNA--LYNSVPEVYENLPTSWFRD---IESLV 1143
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
G+ F + L QAF HPS YQRLEFLGD++LD++I +L++ + +
Sbjct: 1144 GYTFNKKVFLAQAFTHPSNPGSTMSYQRLEFLGDSILDHIIVDHLFNSPRNFPHVDMHLM 1203
Query: 1280 RSMLVN-------------------------NQAFANVAVDQ-SFYKFLIFDSNV----- 1308
R+ L N N F + + S ++++ ++
Sbjct: 1204 RASLANADFLAFLCIGMTTDEERGEIVEASRNGTFTRMTTRKISLWQYMRHGTSWELTVS 1263
Query: 1309 LSETINNYVDYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+T+N Y + T+ + E P K DL+ES LGAI +DS +L
Sbjct: 1264 QQQTVNQY--QALKADITKALYEADTYPWALLSRLRAQKFFSDLIESVLGAIFIDSHGSL 1321
Query: 1359 NTVWKI-----MLSFLDPILKFSNLQLNPIRELLELC 1390
+ +++FL IL+ ++P + L E+
Sbjct: 1322 DACTAFLERIGLMNFLRRILQAEIDIMHPKQRLGEMV 1358
>gi|391345092|ref|XP_003746827.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1446
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 192/677 (28%), Positives = 299/677 (44%), Gaps = 97/677 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI-CIFLAPTVAL 117
AR YQ+EL KA+E NII+ LGTG GKT ++VLLI EL + R + +FLAPTV L
Sbjct: 25 ARDYQIELLLKAVERNIIICLGTGTGKTFVSVLLIKELLYETRPDGGNRRSVFLAPTVPL 84
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V+QQA VI+ + +V + GG +W +EI++ VLVM+PQ+ L FI
Sbjct: 85 VKQQAAVIKIHVDAEVGCYFGGDTVDNWQESEWRREIEKNNVLVMVPQVFSNILNQNFIN 144
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASAQAN 235
++ I L++FDECH A +S Y +IM++ Y K K PRI G+TAS + K + Q
Sbjct: 145 LDQINLMVFDECHAATGQSC--YVQIMQNHYVKMGPEKRPRILGLTASVLNKKVKTTQVR 202
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY-------------GPVINDTS 282
I L + LD+ + + A + F + P + +Y P + + S
Sbjct: 203 --SEIRGLCSRLDSTLATSMSAMN---FGTKPREMIVEYQESDAVVAFAAAASPEVGNFS 257
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALH 342
+ T L E+ + +L +L Q L N + L D +
Sbjct: 258 AKMKT---MLIEVGPHGAMKSLEHRLKAVQHLLNVS-----LADKSRL------------ 297
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEV---FAAICRRDGIASDLSCIEV 399
+ +R L+E E + C + E+ + +C G A + ++
Sbjct: 298 ---------DGLRALLLEIETARERSTACLQRIREGEMRNPYYVLCPDPGAADTIPADDL 348
Query: 400 LKEPFFSKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSYILQNL-----KFLASW 453
E KL RL+ I TFR + + C+VF T AL +L L +
Sbjct: 349 --EFSVPPKLRRLLNIFETFRDCGRELCCVVFARERYTVFALWCVLTTLSRKHPQRFGFI 406
Query: 454 RCHFLVGV-NAGLKSMSRNAMK-----------SILEKFRSGELNLLVATKVGEEGLDIQ 501
R F++G N+ LK + S LE FR+G N+LVAT V EEG+D+
Sbjct: 407 RPGFVMGAGNSSLKCEETKIVDFADEGFVENEGSTLENFRTGVHNVLVATSVIEEGVDVP 466
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDRMNRE 560
C L++R + S++Q RGRAR S YA LV + + +++ I +F E + R
Sbjct: 467 QCNLIVRMNGDMNFRSYVQGRGRARAKPSIYAILVAATSAAKVNSDIGDFKVTEQIITRY 526
Query: 561 IMDRTSSDAFTCSEERIYKVDS-------------SGACISAGYGVSLLHRYCSKLPHDE 607
+ E + D + A I+A S+L YC L +D
Sbjct: 527 CQEHDMDVMCESDVELALEGDPDLPTIYANPEDPLNSAIITAQSARSVLQWYCDTLGNDR 586
Query: 608 FFNPKPKFYYFDDLGG------TICHIILPANAPIH--QIVGTPQSSMEAAKKDACLKAI 659
F +P Y + C I+LP + ++ ++ G S ++ A L
Sbjct: 587 FQVMRPLISYHSRPSKNQNEVESRCSILLPKASKLYPEEVYGKWLPSKPKSRVSAALATC 646
Query: 660 EDLHKLGALNDYLLPQE 676
+ L++L L + L+P++
Sbjct: 647 KRLYELDELTENLVPRK 663
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 184/380 (48%), Gaps = 48/380 (12%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L ALT Q+ + ER E+LGD+FLK AV HLF D DEG LT R ++N NL
Sbjct: 1009 ILTALTPSSAQDVVNSERFEVLGDSFLKIAVTLHLFPREDLPDEGTLTAERCRLISNMNL 1068
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
LKLA + + + F + F R P + S+E + Y
Sbjct: 1069 LKLAVPKKIHEAVESRIFSARESF----RVPGMISREGNKLQLQVY-------------- 1110
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV----------EFEASQV 1193
K AD VEA++G +++ SG A FL+++G+ + F+ S
Sbjct: 1111 -------KSKICADSVEAMIGVYLERSGPIGALEFLRYLGLSLSDSDSGSFLSRFDLS-Y 1162
Query: 1194 TNICISSKSFLPLSASLD-MATLEILLGHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFL 1251
+ + ++ + D M+ +E +LG++F +R LL+A H S+N R+ Y+RLEFL
Sbjct: 1163 DPVVGGNHDYISIRRHNDVMSRVESILGYRFKNRLYLLEAITHQSYNNRVTHSYERLEFL 1222
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GDAV+DYL++ ++++ P L PGQLT +RS LV N FA + + L+ S +L
Sbjct: 1223 GDAVIDYLVSCFIFTNDPHLGPGQLTSVRSALVCNNQFAQIVTKAGLSRCLLHRSPLLFR 1282
Query: 1312 TINNYV---------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
+ +Y D I T E + PK GDL+ES +GA+ +DS + + W
Sbjct: 1283 MMTSYTEAVEIGRPCDSFIGDDET-EDADLVDAPKPFGDLMESLIGAVFIDSNQDFSRTW 1341
Query: 1363 KIMLSFLDPILKFSNLQLNP 1382
+ + + L+ NP
Sbjct: 1342 DVFRGLMGDRVLLETLKDNP 1361
>gi|170099920|ref|XP_001881178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643857|gb|EDR08108.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1469
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 186/701 (26%), Positives = 309/701 (44%), Gaps = 109/701 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ ++++ +NII+ L TG GKT IAVL L H I + +C F APTVAL
Sbjct: 13 TRGYQQEMLEESLRKNIIIALDTGSGKTLIAVL---RLKHEIHREPTKVCWFFAPTVALC 69
Query: 119 QQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
+QQ VI+ + V G + ++ WEK I + V+V PQ+ L L H ++
Sbjct: 70 EQQKSVIQTYLPVSVGLISGSLEPDQWRNAALWEKVIRTHRVMVSTPQVFLDALRHGYLV 129
Query: 177 M-ELIALLIFDECHHAQVKSNHPYAKIMKDFY------KPDIMKVPRIFGMTASPVVGKG 229
+ I LL+FDE HHA NHPY +IM++FY D ++ P + G+TASP+ G
Sbjct: 130 LGRDICLLVFDEAHHA--VDNHPYNRIMQEFYFDLPIQGSDFVR-PAVLGLTASPIYG-- 184
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSPVVRVYQY---GPVINDTSSSY 285
N+ K+ ++E LD+ + + +L FV P + Y P+ S++Y
Sbjct: 185 ----GNVVKAFQTIEANLDSTIRAPRRHRAELAQFVYKPKFKHVLYQPPDPLCLPFSTNY 240
Query: 286 VT-CSE-QLAEIKREQYISALSRKLHD-----------HQSLRNTTKQLNRL-HDSMK-F 330
CS EI+++ Y+ +L +++ Q L + N H +K F
Sbjct: 241 AALCSVIDTLEIEKDPYVVSLRKQIKKTIPGSAEFHRLDQKLSTVISKRNSFTHKGLKDF 300
Query: 331 CLENLGVCGALHASYILLSGDETMRNELIEAE--GNTIDDSLCRFASQASEVFAAICRR- 387
+C + + D + L +A+ N ++ + + + I +
Sbjct: 301 SNATSSICQDIGP----WAADWFVEKVLAKAKLAANPHNNFMSSWKNSEKAYLLGILNQI 356
Query: 388 ---------DGIASDLS-CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTA 437
D I D S + VL E ++K + I+FV R
Sbjct: 357 VVSPVSYYPDDITDDSSDKVRVLVECLLAEK-------AEAEAHDEAYSGIIFVQRRDAV 409
Query: 438 RALSYILQN-LKFLASWRCHFLVGVNAG---------LKSMSRNAMKSILEKFRSGELNL 487
AL+ +L N + +R L+G + +++ R + + + F+ GE NL
Sbjct: 410 LALAELLSNHPQTKDQFRVGLLIGTSESSYRHAVMDITRNLIRESQEDTIADFKIGEKNL 469
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLI 547
+V+T V EEG+DIQ C VIR+D P +AS+ QSRGRAR +S + + + G++ + D+
Sbjct: 470 IVSTSVAEEGIDIQACGSVIRWDPPPNMASWAQSRGRARRQRSTFTVMFEDGSKNQKDVA 529
Query: 548 KNFSKEEDRMNREIMDRTSSDAFTCSEER------------IYKVDSSGACISAGYGVSL 595
K + E +M D T F E+ +++ S+GA ++ VS
Sbjct: 530 K-WENLERQMVALYNDPTRDLEFILDEQDSDEMEEEEDDDWVFRHPSTGALLTLHSAVSH 588
Query: 596 LHRYCSKLPHDEFFNPKPKF-----YYFDDLGGTICH--IILPANAPIHQIVGTPQS--- 645
L +C+ +P+ + +P + + + H I+P P V P++
Sbjct: 589 LSHFCAVIPNSAHVDNRPLYDIDPPDFIEGWHALEPHARAIIPYTGPYGSKVTLPRALPL 648
Query: 646 ------------SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ +A + A +A L++ G LND LLP
Sbjct: 649 PTREFFVERMYDTKISAHRHAAFRAYFSLYEAGLLNDNLLP 689
Score = 118 bits (296), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 216/491 (43%), Gaps = 68/491 (13%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
LLP+++ + L L+ + + + ++L+ A+T ER + +RLE LGD
Sbjct: 935 LLPALLRSIGMLTTTHSLQKAVFTPASPISSIPMQLLMVAITAPSSNERKNYQRLETLGD 994
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL-AARNNLQVYIRDQPFDPCQF 1106
LK+ G L + EG LTR++ +AV+N L K AR + IRD
Sbjct: 995 TVLKFVCGIQLLSEYPLWHEGYLTRKKDHAVSNVRLAKENVARELYRWIIRD-------- 1046
Query: 1107 FALGRRC-PRICSKETERTIHSQYDGRAPDDLNA-EVRCSKGHHWLHKKTIADVVEALVG 1164
LG++ P SK+ T + D +++N + + L K +ADVVE+++G
Sbjct: 1047 MLLGKKWKPHYLSKKDAETT-PEPDKMTVEEVNTKKKKKKGKSQSLSTKVLADVVESIIG 1105
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFE--ASQVTNICISSKSFLPLSASLDMATLEILLGHQ 1222
A GF +K+ + ++++ +++ + ++ + +E +LG+
Sbjct: 1106 AAYLHGGFDLGYECIKFFDLGLKWQPLPTRIEQLLSRARDSEETPYPHQLVDVESMLGYT 1165
Query: 1223 FLHRGLLLQAFVHPSFNR---LGGCYQRLEFLGDAVLDYLITSYLYSVYPK-LKPGQLTD 1278
F H+ LL++A H S+ + Y+R+EFLGD++LD ++T YLY K PG +
Sbjct: 1166 FNHKLLLIEALTHASYQQDQYTSSSYERMEFLGDSILDMIVTDYLYRAPGKEYSPGHMHL 1225
Query: 1279 LRSMLVNNQAFANVAV-------------------DQS--------------FYKFLIFD 1305
+S +VN A + + DQ ++ L+
Sbjct: 1226 RKSAVVNAHFLAFICLRTCLHFDASMPRPSPDSQGDQGPVKIELAPDSQEIYLWQCLLHS 1285
Query: 1306 S-NVLSETINNYVDYMITPSSTREVKEGP-----------RCPKVLGDLVESSLGAILLD 1353
S VL + N ++ + + + E + PK L D+VES +GAI LD
Sbjct: 1286 SPRVLDDQSNTFIRFRKCKAVIEKALEKGIIFPWAALTRLQAPKFLSDMVESLIGAIFLD 1345
Query: 1354 SGFNLNTVWKIM-----LSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKF 1408
S +++ V ++ + L+ I++ L+P+ L + + D ++++ K G
Sbjct: 1346 SNGDMDCVKGVLRKTGIIQILERIVRDDVDILHPVSRLSDWASKNDKEIEYKFEKSKGNV 1405
Query: 1409 LAEAKVTGKDK 1419
V GK++
Sbjct: 1406 SCIILVNGKEE 1416
>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1635
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 179/661 (27%), Positives = 298/661 (45%), Gaps = 100/661 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ + +++ENIIV ++ FLAPTVAL
Sbjct: 17 RNYQTEMFEASLQENIIV----------------------------ALIWFLAPTVALCF 48
Query: 120 QQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ VI +++ K RT G K W+ + +V+V +L + + F++
Sbjct: 49 QQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSNGFVR 108
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGAS 231
+ + LLIFDE HH + HP +IM+DFY P ++K VP I G+TASPVV +
Sbjct: 109 VSQLGLLIFDEAHHCMRR--HPANRIMQDFYHPTLVKQGPDAVPGILGLTASPVVRTNSQ 166
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTC-- 288
+ + ++N++ A ++L + P ++ Y PV I+D +S T
Sbjct: 167 ELSMIESNMNAICKTPRAH------RQELLTHTHRPHLQQIWYTPVNIDDPTSGTRTLRA 220
Query: 289 ---SEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLENLGV 337
+ + +++ + Y+ L R D ++L+ + L R + + LG
Sbjct: 221 LIHAWETIDLEDDPYVKQLRRSTFDGKALQKALLTRKTYCNESLRRFVERSCHIFQELG- 279
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDS--LCRFASQASEVFAAICRRDGIASDLS 395
Y + + +R + IDDS + + ++ E A+ IA+ S
Sbjct: 280 --GWAVDYFIHASIRRLREK--------IDDSALMLDWDNEEKEYLASFL--SNIATIQS 327
Query: 396 CIEVLKEPFF-SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-W 453
E F S KL LI LS+ ++F + T L+ +L +
Sbjct: 328 DPPRRPEDFIPSPKLEALISFLSSTD-DSTFSGLIFAKQRATVTVLATLLSVHPLTKDRF 386
Query: 454 RCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
RC VG + G +S + L +FRSG+ NL+VAT V EEG+DI C +V
Sbjct: 387 RCAAFVGWSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVV 446
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ---------RELDLIKNFSKEEDRM 557
I +D P V SF+Q RGRAR +S +A L + ++ E +I+ + +E +
Sbjct: 447 ICYDKPANVKSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEAMIEAYQDDERKR 506
Query: 558 NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
+ T ++ T ER ++V+S+GA ++A V+ LH +CS LP + + +P+ +
Sbjct: 507 CEALALETMAEVVT---ER-FEVESTGAVLTADTAVARLHHFCSILPQQPYVDNRPELSF 562
Query: 618 -FDDLGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALNDYLL 673
+D G LP+ + + + G + E AA K+A + + L++ G LND+LL
Sbjct: 563 EYDGTGRRRGTFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGLLNDHLL 622
Query: 674 P 674
P
Sbjct: 623 P 623
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 42/328 (12%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
+P C + + F+ I + +I+ RLE L+A L + + S ++
Sbjct: 856 IPATACTIDRLPFTDTIFGLF--ISAILDRLEATLIATRLCETI---LQDVQFSSTRHVI 910
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
A++ Q +R E GD+ LK+ V L++ H EG L+ R V N+ L +
Sbjct: 911 TAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLAR 970
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A L +I + F P ++ A P I K E G+ P
Sbjct: 971 AALDVGLDAFILTRRFTPRKWTA-----PLISEKAVE------VAGKRP----------- 1008
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
L K +ADVVE+L+GA D G A ++ + ++E IC + +
Sbjct: 1009 ----LSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIE--------ICPITPPPVH 1056
Query: 1206 LSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITS 1262
SA M +L+ LG+ F++ LL++A HPS YQRLEFLGDAVLD ++
Sbjct: 1057 ESAPHVMNDSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVH 1116
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
+ + G++T ++ L N A
Sbjct: 1117 AMAHHAVECPQGEMTMIKHALTNANLLA 1144
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQR EF GD+VL + ++ LY +P G L++ R +V N A A+D F++
Sbjct: 924 YQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAFIL- 982
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
T + +I+ + + P KVL D+VES +GA +D G
Sbjct: 983 ---TRRFTPRKWTAPLISEKAVEVAGKRPLSSKVLADVVESLIGAAYMDGG 1030
>gi|402073770|gb|EJT69322.1| dicer-like protein 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1538
Score = 190 bits (483), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 204/735 (27%), Positives = 316/735 (42%), Gaps = 103/735 (14%)
Query: 3 DGESTVEGSQPSGGGTKICAATSAVVEECSVAVSGVGFGAE--SSVGAQKTDKDPKQIAR 60
+GE+ +GG + VVEE + S A S G R
Sbjct: 15 EGEADEMAVLVAGGSQQPRLGHHDVVEEHEDSASPTTGSARLHDSAGPGTPAPRTSMTPR 74
Query: 61 KYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQLEL + +ME+NIIV + TG GKT +AVL I ++ L R FLAPTV L Q
Sbjct: 75 VYQLELFQASMEQNIIVSMDTGSGKTQVAVLRI--ISELERTDADKRIWFLAPTVTLCNQ 132
Query: 121 QAKVIEE---SIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
Q +V+ SIG K+ T + W+ + + V+V QIL L H F+ +
Sbjct: 133 QFEVLRSQLPSIGVKILTGDDNVDSWSNQSIWDAVLFETRVVVCTYQILFDALSHSFVTL 192
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKP---DIMKVPRIFGMTASPVVGKGASAQA 234
+ I+L++FDE H+ N+ ++M FY P + VP I G+TASPV+ +
Sbjct: 193 DTISLIVFDEAHNCL--GNNSGRRMMMQFYHPRKESGLPVPHILGLTASPVMRSDIT--- 247
Query: 235 NLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
S++SLE LDA ++L + V+ P++ + Y P D +TC
Sbjct: 248 ----SMDSLEASLDAVCRGPTVHRDELLANVNRPLMAIDAY-PRPPDP----MTCPTD-- 296
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI------L 347
++R Q + + D + + +R ++ EN H ++I
Sbjct: 297 NMRRLQDAFSQLKIAEDPYVMHLYAQGTDRSKRMLEKVFEN-------HDTFIRRQIKAF 349
Query: 348 LSGDETMRNELIEAEGNTIDDS-LCRFASQASEVFAAICRRDGI--ASDLSCIEVLKE-- 402
+S +T+ E+ G+ DS +C+ +A++ G A +++LK
Sbjct: 350 ISRSQTILEEM----GSWAADSYMCQAIKRATKSRTRSSYLVGWLDAEQRYLVKILKGVR 405
Query: 403 --------PFFSKKLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNLKFL-AS 452
P F +L +L+ Q IVFV TA LS +LQ +
Sbjct: 406 AKPPQPPYPAFETSAPKLQALLTVLASHQGNPVGIVFVKERATAAVLSSLLQEFPMINER 465
Query: 453 WRCHFLVGV--NAG-------LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTC 503
++ ++VG NA L M S L+ FRSG +NLLVAT V EEG+D+ C
Sbjct: 466 YKVGYMVGTSRNAARKRDFYDLSPMEDGKGASALDNFRSGRINLLVATSVLEEGIDVPVC 525
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ---------------------R 542
LV+ FD P + SFIQ RGRARM S+ L++ G + R
Sbjct: 526 NLVVCFDRPANLKSFIQRRGRARMRSSQLHLLLEEGERLVAHDWEALEKEMKRRYEDEMR 585
Query: 543 ELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK 602
ELD +K EE + T+ D + + A I+ L +C
Sbjct: 586 ELDHLKQLEDEE-------AENTTMDGPLAP----LRARDTAAEITIKDAKGHLDHFCRV 634
Query: 603 LPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIH-QIVGTPQSSM--EAAKKDACLKAI 659
+ F +P P++ + ++LP + P+ + + + + M + A KDA L+A
Sbjct: 635 IGSRMFVDPSPEYLINETSSEIHATVLLPVSLPLKLRRISSSRGWMSQKNACKDAALQAY 694
Query: 660 EDLHKLGALNDYLLP 674
+ L+ G LN +LLP
Sbjct: 695 KMLYDAGLLNQHLLP 709
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 67/327 (20%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSI + +EN +VA EL L + +++ AL+ Q + ER+E LGD
Sbjct: 988 LIPSITNAMENYMVAEEL--LRTTPLGTLGFKDVALVVTALSAPSSQNVTNYERIEFLGD 1045
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK + EG L+ + V+NS L + A + L +I
Sbjct: 1046 SILKLCASITCAANNLEYPEGYLSLVKDRIVSNSRLCRAAVKFGLDRFI----------- 1094
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ ++ K + + +Q D L KT+ADVVEAL+GA +
Sbjct: 1095 -ITKQHTLRGWKRVLQAMEAQRD-------------------LSTKTLADVVEALIGAAL 1134
Query: 1168 DDSGFKAA----TAFL---KW----IGIQVEFEASQVTNICISSKSFLPLSASLDMATLE 1216
+ G A + FL +W +G Q+ ++A+ S LP++ M +E
Sbjct: 1135 IEGGMDKALRCISLFLPDEEWRSLDLGRQILYQAAP------KSVKKLPVT----MRPVE 1184
Query: 1217 ILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVY----- 1268
LLG+ F ++ LL++A H S++ G GC +RLEFLGD++LD ++ L+++
Sbjct: 1185 GLLGYTFRNKALLVEALTHSSYSVPGSETGCLERLEFLGDSILDSVVVEKLFAIGGGDGD 1244
Query: 1269 -----PKLKPGQLTDLRSMLVNNQAFA 1290
P L + LR+ +VN A
Sbjct: 1245 GDNGRPPLAHTDMHLLRTAMVNGDFLA 1271
Score = 41.2 bits (95), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F L++ A PS + Y+R+EFLGD++L + + + G L+ ++
Sbjct: 1016 FKDVALVVTALSAPSSQNVTN-YERIEFLGDSILKLCASITCAANNLEYPEGYLSLVKDR 1074
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDL 1342
+V+N AV +F+I + T+ + + + R++ K L D+
Sbjct: 1075 IVSNSRLCRAAVKFGLDRFIITKQH----TLRGWKRVLQAMEAQRDLST-----KTLADV 1125
Query: 1343 VESSLGAILLDSGFN 1357
VE+ +GA L++ G +
Sbjct: 1126 VEALIGAALIEGGMD 1140
>gi|41469332|gb|AAS07188.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 416
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 155/266 (58%), Gaps = 8/266 (3%)
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRS 482
Q ++CIVFV R++T+ L ++L ++ ++ W + G GL S SR I+E FR
Sbjct: 3 QDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRK 62
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
G++++++AT++ EEGLD+ +C LVIRFD TV SFIQSRGRARM S+Y LV G+
Sbjct: 63 GKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGDVE 122
Query: 543 ELDLIKNFSKEEDRMNREIMDRTSSDA----FTCSEERIYKVDSSGACISAGYGVSLLHR 598
+ F M E + S T E+ Y+V+S+ A ++ V L+H
Sbjct: 123 AQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLIHF 182
Query: 599 YCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKA 658
+CSKLP DE+FNP P+F D GT C + LP ++P+ + + S+ K+ CLKA
Sbjct: 183 FCSKLPSDEYFNPLPRF-DIDKASGT-CTLHLPKSSPVQTVNVEGEGSI--LKETVCLKA 238
Query: 659 IEDLHKLGALNDYLLPQEDNATEDEP 684
++LH +GAL D LLP+ D ++EP
Sbjct: 239 CQELHAIGALTDSLLPELDVPCDEEP 264
>gi|374259480|gb|AEZ02176.1| Dicer [Arabidopsis thaliana]
Length = 1033
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 172/329 (52%), Gaps = 21/329 (6%)
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
K+ LI +L ++ + IVFV R+V A L + L L+ RC ++G N +
Sbjct: 648 KVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNS-QE 706
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
M + M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR
Sbjct: 707 MKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARK 766
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCSEE 575
P S+Y +V+ GN ++N E+ + +E ++RT S DA +
Sbjct: 767 PGSDYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT-- 824
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIIL 630
+YKV+++GA +S V L+H YCS+LP D + +P+F + GG C + L
Sbjct: 825 -VYKVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQL 883
Query: 631 PANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSD 690
P NAP + G SSM A++ CL A + LH++GA D LLP + + + E +
Sbjct: 884 PCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDE 943
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKS 719
+ G E + V VL+ W S
Sbjct: 944 GEPVPGTARHREFYPEGVADVLKGEWVSS 972
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 146/253 (57%), Gaps = 10/253 (3%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA+VI F+V +CG G S W++E + +VLVM QILL L H I
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQVLVMTAQILLNILRHSII 367
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQA 234
+ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q
Sbjct: 368 RMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
+ I +LE LD+ V +++D ++LE V P V +Y S + T + +A
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAAT-MWSLHETIKQMIAA 484
Query: 295 IKREQYISALSRK 307
+ E+ A SRK
Sbjct: 485 V--EEAAQASSRK 495
>gi|442570278|sp|Q1DW80.3|DCL2_COCIM RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|392868830|gb|EAS34630.2| dicer-like protein 2 [Coccidioides immitis RS]
Length = 1435
Score = 190 bits (482), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 181/660 (27%), Positives = 308/660 (46%), Gaps = 66/660 (10%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + AR YQLE+ +++ +NIIV + TG GKT IA+L I L R P F+APT
Sbjct: 43 PPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQR--ELERCPAHKFVWFMAPT 100
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSKRLKSHCD----WEKEIDQYEVLVMIPQILLYC 169
VALV+QQ I + + F+ R G + SH W+ + +++ PQ+LL
Sbjct: 101 VALVEQQHSAISKQLPAFQTRLLTGAAN--VSHWSTKKIWDDILLNIRIVISTPQVLLDA 158
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKVPRIFGMTASP 224
L + F+ + I+LL+FDE HH + P +IM+DFY + +P I G+TASP
Sbjct: 159 LSNGFVDLHTISLLVFDEAHHC--VRDAPANRIMRDFYHYHRQEEGTDGLPHILGLTASP 216
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
+ L ++N++ + K++ E++ FV P R +Y P + + SS
Sbjct: 217 TTRARQTDLEVLEINLNAV--CVTPKMHR----EEMMQFVHMPEYRSIEYQPDVQNFSSI 270
Query: 285 YVTCSEQLAE--IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC---- 338
S + E I+ + ++ + R+ L++ + L+ L + CL+ L C
Sbjct: 271 VEKLSVIINELDIENDPFVKFMRRR----NDLKSRQRLLDALENKKTPCLDQLKRCLRRS 326
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
+H + + + ++ + + S ++A E + + + ++ +S E
Sbjct: 327 RVIHRELGPWASERFLTRCIMGLKSKQTNASGPQWADWDREDNSYML--NVLSQVVSSTE 384
Query: 399 V-LKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKFLASWR 454
+ ++ P +L R + L F + +H+ IVF L+ +L +
Sbjct: 385 MGVQNP--PDELSRKVHKLIDFLVLEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIK 442
Query: 455 CHFLVGVNAGLKSMSRNA----------MKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+G +A S+SR + + ++ R+G+ +L++AT V EEG+D+ C
Sbjct: 443 TTAFLGSSA---SVSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICD 499
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNREI 561
LVI FDLP+ + SFIQ RGRAR S++A + D EL L++ K+ N+
Sbjct: 500 LVICFDLPKDLRSFIQRRGRARKKGSKFALFLHSEDRATSSELHLMEKTMKQLYLENKRA 559
Query: 562 MDRTSSDAFTCSEERIY---KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY- 617
++ EE Y +V S+GA ++ + L +C L EF P+F
Sbjct: 560 LEHIQ--YLENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTLS-AEFIATDPEFVLE 616
Query: 618 FDDLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLLP 674
DD G +ILP+ + + + G E AK+DA +A L++ G +NDYL+P
Sbjct: 617 GDDTTGFSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 97.8 bits (242), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 39/328 (11%)
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
D LP E Q + +P ++H +EN +A EL + P G + +
Sbjct: 930 DRLPVEYSQFAL------------FIPCLIHSIENYFIANELAQTIL--HPVGFS-NLSL 974
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L A+++ +E + +RLE LGD+ LK L H EG LT R+ N V+N L
Sbjct: 975 VLTAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYL 1034
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
A + L +I +PF ++ + + T H D+ R
Sbjct: 1035 ANAALQTGLDKFILTKPFTGAKW------------RPSYNTDHIN-----TGDMTEPTRE 1077
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKS 1202
+ K +ADVVEAL+GA D G LK +++ ++ NI +
Sbjct: 1078 ------MSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQED 1131
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+ ++ +E L+G+ F + LLL A HPS G YQRLEF+GD++LD ++
Sbjct: 1132 SFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSSKGSGHSYQRLEFVGDSILDIIVVQ 1191
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
L+ + +R+ LVN A
Sbjct: 1192 ELFESPRCFHHFDMHLMRTALVNADFLA 1219
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F + L+L A + S R YQRLEFLGD++L + L + +P G+LT +
Sbjct: 969 FSNLSLVLTA-ISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGN 1027
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-VDYMITPSSTREVKEGPRCPKVLGD 1341
+V+N AN A+ KF++ ++ +Y D++ T T +E KVL D
Sbjct: 1028 IVSNGYLANAALQTGLDKFILTKPFTGAKWRPSYNTDHINTGDMTEPTRE--MSTKVLAD 1085
Query: 1342 LVESSLGAILLDSGFNLNTVWKIM--LSFLDPILKFSNLQ 1379
+VE+ +GA +D G N KI+ L P +K+S L
Sbjct: 1086 VVEALIGAANIDGGEN-----KILNCLKIFIPDIKWSPLN 1120
>gi|392566224|gb|EIW59400.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 1508
Score = 189 bits (481), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 192/716 (26%), Positives = 317/716 (44%), Gaps = 114/716 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ EL ++++ N+I+ L TG GKTHIAVL + A + + + F+APTVALV
Sbjct: 20 RAYQQELLEESLHRNLIIALDTGSGKTHIAVLRMKLEAE---RHSRKVSWFIAPTVALVD 76
Query: 120 QQAKVIEESIGFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ +VI+ +I V G S+ + K W + + + ++V PQ+LL L+H ++ +
Sbjct: 77 QQYEVIKTAIPVSVGHVSGASEPNQWKDASLWRRILATHRIMVTTPQVLLDALHHAYVDL 136
Query: 178 EL-IALLIFDECHHAQVKSNHPYAKIMKDFYK----------PDIMKVPRIFGMTASPVV 226
I L++FDE HHA K HPY+ IMK+FY P P + G+TASP+
Sbjct: 137 GTDIGLMVFDEAHHATGK--HPYSMIMKNFYMNLPSRTNLTGPTDRVRPAVLGLTASPIY 194
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAED-LESFVSSPVVRVYQYGPVIND----T 281
G N+ + LE LD+ + S D L V P + Y I+
Sbjct: 195 G------GNVDVAFRDLEKNLDSTIRSARKHRDNLAEHVYRPEFKHVLYASPIHVWDGLP 248
Query: 282 SSSYVTCSEQL--AEIKREQYISALSRKLH-----------DHQSLRNTTKQLNRLHDSM 328
S++Y + + +I+ + Y+ +L +L D Q + K+ H +
Sbjct: 249 SANYQSLQTVIDALDIENDPYVKSLRSRLAKLRPTDDRHRLDQQLSKAIDKEDTFTHKGL 308
Query: 329 K-FCLENLGVC---GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
+ F +C G A + + E + N ++ + + + +I
Sbjct: 309 RDFARAAAEICVELGPWAADWYVAKVIERAK-----VAANPYNNIMSAWQEKEKRYLLSI 363
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL----STFRLQ-QHMKCIVFVNRIVTARA 439
+ + + S ++ + S K+ L+ L FR + + ++FV R T A
Sbjct: 364 ISKVNVTTPPSDVDKIVS-GVSPKVRALVDSLVVEEGLFRSRDEDYSGLIFVTRRDTVLA 422
Query: 440 LSYILQNLKFLAS-WRCHFLVGVNAGLK-----SMSRNAMK----SILEKFRSGELNLLV 489
L+ +LQ + A +R L+G ++ K ++RN + L F+ G+ NL+V
Sbjct: 423 LAELLQRIPETAQLFRIGCLLGSSSSFKRHSFLDITRNILDESQADTLRDFKIGDKNLIV 482
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV-DSGNQRELDLIK 548
+T V EEG+DIQ C VIRFD P + ++ QSRGRAR +S + + ++G Q+ +K
Sbjct: 483 STSVAEEGIDIQACGSVIRFDPPPNIVAWAQSRGRARRKRSSFIIMFEETGPQK----VK 538
Query: 549 NFSKEEDRMNREIMDRTSSDAFTCSEERI----------YKVDSSGACISAGYGVSLLHR 598
+ E +M D DA +E ++V S+GA ++ + L+
Sbjct: 539 EWEATERQMMLAYND-PRRDAIVPVDEDDAFDDMDGYVEFEVASTGALLTLHSAIPHLNH 597
Query: 599 YCSKLP------HDEFFNPKPKFY--------------YFDDLGGTICHIILPANAPIH- 637
+C+ +P H + P Y Y G T+ LP P H
Sbjct: 598 FCAVIPSGGHESHVPIYELDPPDYVEGWHSLPNPSRMPYQGPWGATVS---LPRALPKHL 654
Query: 638 QIVGTPQ--SSMEAAKKDACLKAIEDLHKLGALNDYLLP-----QEDNATEDEPML 686
+ TPQ S A++ +A +L+ G L+++LLP + D E E ML
Sbjct: 655 RKFSTPQIHGSKRRAQQHVAYQAYLELYHAGLLDNHLLPLSTAIEPDKKEEVEAML 710
Score = 110 bits (275), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 206/491 (41%), Gaps = 69/491 (14%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDD----LPPELCQLKIIGFSKDIGSSLS 987
PL+ + L R RN L LE+++ ++ DD L P+ +++ S+D
Sbjct: 923 PLMVVQSLPRRRNFLIPLTLENAD-RRIQPPPDDSLFLLHPQYALVELA--SRDEVQYAL 979
Query: 988 LLPSIMHRLENLLVAIELK-HLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+LPSI+ L N L L+ +L + G V +LL A+T QE +RLE LG
Sbjct: 980 MLPSILRWLANALTVDALRTNLFRTTSVAG--VPLPLLLTAITAPIAQELSHYQRLETLG 1037
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL-QVYIRDQPFDPCQ 1105
D LK+ L+ EG L+R++ +AV NS+L K A + L Q IRD+ F P
Sbjct: 1038 DTVLKFTSSNQLYAEFPLWHEGYLSRKKDHAVANSSLAKEAVKKGLYQWIIRDR-FVP-- 1094
Query: 1106 FFALGRRCPRICSKETE------RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
R+ C+ T+ + K L K +ADVV
Sbjct: 1095 -----RKWKPHCASSTQGPLDELVEEKEEVKEVDAKVGKDGKPKKKKAEELSTKMLADVV 1149
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKSFLPLSASLDMATLEIL 1218
E+L+GA + GF A + G+ + ++ S+ + + L L A +E +
Sbjct: 1150 ESLIGAAYEHGGFDLAIDCVARFGLGISWKKLSERIKEMHEVEDLVDLPDQL--ALVEQM 1207
Query: 1219 LGHQFLHRGLLLQAFVHPSFNRLGGCY--QRLEFLGDAVLDYLITSYLYSVYPK-LKPGQ 1275
L +QF R L+QA H S+ +RLEFLGD+ LD ++T YLY K PG
Sbjct: 1208 LNYQFKRRTFLVQALTHASYQGDSAVMSLERLEFLGDSALDMVVTDYLYHAEGKNYSPGY 1267
Query: 1276 LTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-------ITPSSTRE 1328
+ + VN+ A V + S + + L + D + SS R
Sbjct: 1268 MHIKKEAAVNSHILAYVCLSTSVTVESVMPTWTLGGGLATTDDSQKVHLWQCLLHSSHRV 1327
Query: 1329 V-----------KEGP--------------------RCPKVLGDLVESSLGAILLDSGFN 1357
+ K GP + PK + D+VES LGA+ +DS +
Sbjct: 1328 LEDQNLTFARFEKHGPAIAQALREDRIYPWAALTSLQAPKFISDMVESILGAVYVDSMGS 1387
Query: 1358 LNTVWKIMLSF 1368
L+ V +M S
Sbjct: 1388 LDAVRGVMRSL 1398
>gi|321477029|gb|EFX87988.1| hypothetical protein DAPPUDRAFT_311480 [Daphnia pulex]
Length = 711
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 197/724 (27%), Positives = 319/724 (44%), Gaps = 120/724 (16%)
Query: 43 ESSVGAQKTDKDPKQIA-RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
E++V DKD + R YQ+EL + A++ENIIVYL TG GKT+IA LLI E +H +
Sbjct: 10 EAAVANIHLDKDDGVFSPRDYQIELFQAALDENIIVYLPTGSGKTYIAALLIKEKSHEVA 69
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYE 157
K + +FL PT+ L QQA + + KV+ F G + WE E +
Sbjct: 70 KSLSAGGKRTVFLVPTIVLAIQQAAYLRKHTLLKVKEFYGSMGVDMWGRNKWETEFETNH 129
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRI 217
VLVM QI + L H F + LL+FDECH A VK + P +++ D+ + P+I
Sbjct: 130 VLVMTAQIFVDILNHAFFSPYQLNLLVFDECHSA-VK-DAPMKQVLTKLRSCDVARRPKI 187
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV 277
G+TA+ + + + I L + V D + + + P ++QY
Sbjct: 188 LGLTAA--LFRKRCKPREVRGVIKQLSESMGCIVRIPSDVQTVYRSSTKPCEVIFQY--- 242
Query: 278 INDTSSSYVTCSEQLAEIKREQYIS-ALSRKLHDHQ---------SLRNT-----TKQLN 322
+D + S++L+++ S LS + D L NT ++++
Sbjct: 243 -DDVNIGQNPVSQELSKLIETLLASCTLSSWIQDFLKLSQNYSGCGLNNTFGGKKSEKIE 301
Query: 323 RLHDSMK---FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE 379
L D++K F LEN G GA H + + + ++ A+ N + + + +
Sbjct: 302 VLCDALKDIGFLLENFGPYGAYHCAQLYIPILMGAKSRSQSADFNKVINICHKIQDVCAP 361
Query: 380 VFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ--------HMKCIVFV 431
VFA ++ + F + ++RL+ I+ F ++ M I+FV
Sbjct: 362 VFAKYSAKERLVL-----------FVNPNVIRLLDIIQNFNPKRCRPDEKAFKMCGIIFV 410
Query: 432 NRIVTARALSYIL-------QNLKFLASWRCHFLVGVNAGLKSMSRNAM------KSILE 478
R A L + L +NL+F+ F +G AG S R + K I+
Sbjct: 411 ERRSVASVLYHFLKDIRQHDENLEFVKPL---FTMGQAAGSASSLRESQILNMNQKDIMR 467
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
FRSG NLLVAT V EEG+DI C L++RFD T ++Q++GRAR ++ + LV S
Sbjct: 468 DFRSGNCNLLVATSVLEEGVDIPECNLIVRFDKIRTYCDYVQTKGRARSKKAFFCMLVSS 527
Query: 539 GNQR------------ELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
+ + E L+ + E+D+ D + F+ E + G
Sbjct: 528 SDSKKFLEDMAQFHAIEQQLVATGNFEDDK------DAILDNLFSQIIEPYTPYGNQGPR 581
Query: 587 ISAGYGVSLLHRYCSKLPH--DEFFNPKPKFYYFDD------------------------ 620
++ +SL++RYCS+L P+ D+
Sbjct: 582 VTLQSSISLVNRYCSQLVSYGASVLVPRWSIKEVDESKADPLMLKKMKELMKQLPVVKPL 641
Query: 621 --------LGGTICHIILPANAPIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALND- 670
+ C ++LP ++P+ ++VG P + AK+ A L+A E LH+L L+D
Sbjct: 642 STKEPAEKIALFQCRLLLPKSSPLQGEVVGDPMLTKRLAKRAAALRACERLHQLKELDDL 701
Query: 671 YLLP 674
+LLP
Sbjct: 702 HLLP 705
>gi|322707759|gb|EFY99337.1| Dicer-like protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 1442
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 197/688 (28%), Positives = 308/688 (44%), Gaps = 92/688 (13%)
Query: 37 GVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL 96
G+ E+S T P R YQLE+ +++++N IV + TG GKT +AVL I
Sbjct: 66 GIACDNETSGTPSATAMSP----RAYQLEMLDQSLKQNAIVVMDTGSGKTQVAVLRIK-- 119
Query: 97 AHLIRKPQKSICIFLAPTVALVQQQAKVIE-ESIGFKVRTFCGGSKRLKSHCD-WEKEID 154
A L R I FLAPTVAL QQ VI ++ ++ G + D W+ +D
Sbjct: 120 AELDRSAPDKIIWFLAPTVALCGQQFDVIRLQAASVAMKLLTGNDQVDTWSADTWDTILD 179
Query: 155 QYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDI 211
V+V Q+LL L H FI ++ +L+IFDE HP +KIM DFY K
Sbjct: 180 GVRVVVSTYQVLLDALCHAFISIDRFSLIIFDE-------GKHPGSKIMTDFYHHNKHAA 232
Query: 212 MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVR 270
+P I G+TA+P S + +L +++ LE +LDAK S E+L V P +
Sbjct: 233 KSIPNILGITATP------SMKEDL-ENMEILEAVLDAKCISPTRHREELLKCVKRPQIY 285
Query: 271 --VYQYGPVINDTSSSYVTCSEQL-AEIKREQYI------------SALSRKLHDHQSLR 315
VY + T S Y E L +I+++ YI AL R + + +
Sbjct: 286 SIVYDAPRSLQYTESMYRLRKEFLDLDIRKDPYILRLQEDPSDRNRRALVRAVEKYDTF- 344
Query: 316 NTTKQLNRLHDSMKFCLENLGVCGA------LHASYILLSGDETMRNELIEAEGNTIDDS 369
Q+ L L+ LG A A+++ + + N+ I+AE + D
Sbjct: 345 -VQNQIKGLWGRSAEILQQLGTWAADMYIWKSSAAFLARINTDAIFNDWIDAEKKYLAD- 402
Query: 370 LCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIV 429
F + S A + G +++E L+ + ++ C++
Sbjct: 403 ---FIRRVSPSCPASMPQSGSEVSEKATALVRE---------LVSV------EESTVCLI 444
Query: 430 FVNRIVTARAL-SYILQNLKFLASWRCHFLVGVNA---------GLKSMSRNAMKSILEK 479
FV TA AL +++ + + R +VG + L S + M + L+
Sbjct: 445 FVKERATAGALREFLVSCPRIVEKHRIGSMVGTSNYQSRKLALYELVGQSSDPMAA-LQS 503
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD-- 537
FRSG++N+L+AT V EEG+D+ C +VI FD P+T SF+Q RGRARM +S+ L +
Sbjct: 504 FRSGKINILIATSVLEEGIDVPACNMVICFDHPQTPKSFLQRRGRARMKESKLILLSEHS 563
Query: 538 -SGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLL 596
S + L +N REI S + S +V+S+GA + S L
Sbjct: 564 SSAVAKWEALEENMKAVYQDTQREIRAIQSMENSEESSSTFMEVESTGARLDFENAKSHL 623
Query: 597 HRYCSKLPHDEFFNPKPKF--YYFDDLGGT-----ICHIILPANAP--IHQIVGT-PQSS 646
+C L EF + +P + + +D + ++LP+ P + QI S
Sbjct: 624 EHFCRVLSQGEFVDSRPDYIIHSHEDCDSSSKPRLSATVLLPSFVPSQLRQIDSKFSWRS 683
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ A KDA +A + L++ G +N +LLP
Sbjct: 684 EKNATKDAAFQAYQTLYEAGLVNKHLLP 711
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 41/321 (12%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEILG 1046
L+PS+MH LE L+A EL S + E ++ L++ A+++ E + ERLE LG
Sbjct: 958 LIPSLMHELEVTLIAKEL----STTILERINITDLRLVREAISSRSAAEPVNYERLEFLG 1013
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LKY + +H EG L+ + V+NS L + A L +I + F ++
Sbjct: 1014 DSILKYCTAIQVSAIHPEWPEGYLSFFKDRLVSNSRLSRAAIDVGLAKFILTKTFTGQKW 1073
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
L Y G +V K L KT+ADVVEAL+GA
Sbjct: 1074 RPL---------------YLENYTGNP-----GKVSPRK----LSTKTLADVVEALIGAS 1109
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD-----MATLEILLGH 1221
+ G A + + +++++ ++ + F ++ D + LE L+G+
Sbjct: 1110 YVNGGITKALSCISLFVNEIQWQ-----DVSANRALFFKMARDQDKLPAELKPLEHLVGY 1164
Query: 1222 QFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
QF + LL++A H S F+ Y+ LEF+GDA+LD++I +Y+ P L P Q+ L
Sbjct: 1165 QFNKKSLLIEAMTHQSCMFDYQRRSYEHLEFIGDAILDFIIVRKMYTAEPLLAPHQMHSL 1224
Query: 1280 RSMLVNNQAFANVAVDQSFYK 1300
++ +VN A +++D +
Sbjct: 1225 KTAMVNADFLAFLSLDHQMRR 1245
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+RLEFLGD++L Y + +++P+ G L+ + LV+N + A+D KF++
Sbjct: 1006 YERLEFLGDSILKYCTAIQVSAIHPEWPEGYLSFFKDRLVSNSRLSRAAIDVGLAKFILT 1065
Query: 1305 DSNVLSETINNYVD-YMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGFN 1357
+ + Y++ Y P K PR K L D+VE+ +GA ++ G
Sbjct: 1066 KTFTGQKWRPLYLENYTGNPG-----KVSPRKLSTKTLADVVEALIGASYVNGGIT 1116
Score = 41.2 bits (95), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 25/185 (13%)
Query: 1005 LKHLLSASFPEGAEVSAEMLLKALTTEKCQ---ERFSLERLEILGDAFLKYAVGRHLFLL 1061
L+HL+ F + + +L++A+T + C +R S E LE +GDA L + + R ++
Sbjct: 1158 LEHLVGYQFNKKS-----LLIEAMTHQSCMFDYQRRSYEHLEFIGDAILDFIIVRKMYTA 1212
Query: 1062 HDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ---------VYIRDQPFDPCQFFALGRR 1112
+ ++ ++ VN L L+ + ++ + I D+ P + R
Sbjct: 1213 EPLLAPHQMHSLKTAMVNADFLAFLSLDHQMRRTETAVTSDLQIVDKETTPLALWTFMRH 1272
Query: 1113 CPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWL------HKKTIADVVEALVGAF 1166
E T+ R ++ A +R + W KK +D+ E+L+GA
Sbjct: 1273 SSEAIGIEQATTLKRYEALRG--EILATLRQGSHYPWALLAGLQAKKFYSDIFESLLGAV 1330
Query: 1167 IDDSG 1171
DSG
Sbjct: 1331 WVDSG 1335
>gi|302687578|ref|XP_003033469.1| hypothetical protein SCHCODRAFT_37756 [Schizophyllum commune H4-8]
gi|300107163|gb|EFI98566.1| hypothetical protein SCHCODRAFT_37756, partial [Schizophyllum
commune H4-8]
Length = 1343
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 194/720 (26%), Positives = 316/720 (43%), Gaps = 138/720 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ ++++ NII+ L TG GKTHIAVL L H + + I F APTV L +
Sbjct: 1 RSYQQEMLEQSLHRNIIIALDTGSGKTHIAVL---RLKHEMERRTNKISWFFAPTVGLCE 57
Query: 120 QQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ VI+ S+ V G + K W + + +++++ PQ+LL L H +I +
Sbjct: 58 QQRSVIQRSLPVPVGLISGALEPDQWKDAALWMRVLRDHKIMISTPQVLLDALRHGYINL 117
Query: 178 -ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM------------KV-----PRIFG 219
I+LL+FDE HHA NHPY ++M +FY+P KV P + G
Sbjct: 118 GRDISLLVFDEAHHA--VDNHPYNRVMLEFYRPLATVPVNVESQIAPGKVVPLCRPAVLG 175
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGP-- 276
+TASP+ G N K+ ++E+ LDA + + V ++L S V P + Y P
Sbjct: 176 LTASPIFG------GNTEKAFRTIESNLDATICAPVVHRKELLSHVHRPTFKHVMYTPPG 229
Query: 277 -------------------VINDTSSSYVTCSEQLAEIKR-----EQYISALSRKLHDHQ 312
V + + ++ ++L + R E+ LS+ +H +
Sbjct: 230 EWDRPFSTNLASLQAVVKSVDINRDPAVISLRQKLPTLARGTPEYERTDQRLSKAIHKKK 289
Query: 313 SLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCR 372
+ +T L + + + E++G G Y+ E + I GN+I SL
Sbjct: 290 TFTHTG--LTQFQRAAEEICEDIG--GWAADWYVWTVVQEARKAARI---GNSI-ISLSS 341
Query: 373 FASQASEVFAAICRRDGIAS-DLSCIEVLKEPFFSKKLLRLIGIL-----STFRLQQHMK 426
+ ++ + I R + L+ ++L + ++K+ L+ L +
Sbjct: 342 WGNKEKKYLLDILDRVHVNPVSLAPDDILDDS--TEKVHALVNTLLSEKAEAEAANEAFS 399
Query: 427 CIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL-KSMSRNAMKSI--------- 476
+VFV R + AL+ +L+N F VG G +S R++ I
Sbjct: 400 ALVFVERRDSVFALAELLKNHPVAGR---EFSVGNLVGTSESTHRHSFLDITRVLLDQKL 456
Query: 477 ---LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
LE FR G N++V+T V EEG+DIQ C V+R+D P +AS++QSRGRAR +S +
Sbjct: 457 DETLEDFRLGTKNVIVSTSVAEEGIDIQACGCVVRWDPPPNMASWVQSRGRARRKRSVFV 516
Query: 534 --FLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS--------SDA-------FTCSEER 576
F + G++++++ E +R+ +E++DR + DA EE
Sbjct: 517 SLFSTEGGHRKDVN-------EWERLEKEMVDRYTDPTRVQYNQDAGWGEDGEDEDEEEL 569
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL-------GGTICHII 629
IY ++GA I+ + L +C+ +P + +P Y D T +
Sbjct: 570 IYTNPTTGAKITLQSALPHLEHFCAMIPFSAHTDNRP-IYDVDPPEMPPGWHENTRVEVP 628
Query: 630 LPANAPIHQIVGTPQ---------------SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
LP P V P+ S+ +A + A LHK G LND+ LP
Sbjct: 629 LP-TGPFGATVTLPRVVPLEVRSFTVPREFSTKISAFRHVAFVAYTTLHKCGLLNDHFLP 687
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 200/465 (43%), Gaps = 66/465 (14%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
P+L +PL N L S + + F L P+ + + G + +LLPS
Sbjct: 870 PILVVQPLPARVNFLAPLPPRASAAPTSDPRFVYLLPQFASVILQG--QQDAEYAALLPS 927
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
+ LE LK L AS P + V ++ A+T QE + +RLE +GD LK
Sbjct: 928 TLRALEVTTTVDSLKEHLFASTPMES-VPQSLMSVAMTAPVSQEPVNYQRLETMGDTVLK 986
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL-QVYIRDQPFDPCQFFALG 1110
Y V L+ + EG L +++ + V+N L K++ R ++ Q IR++
Sbjct: 987 YLVSIQLYAEYPLWHEGYLAKQKDHTVSNVRLAKISVRRHIFQWIIREKN---KPKKKKK 1043
Query: 1111 RRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDS 1170
+ ++ +K T I S E+ +K +ADV+E+L+GA
Sbjct: 1044 KDNNQLSTKGTVLKITS------------ELLLTK------LSVLADVIESLIGAAYVHG 1085
Query: 1171 GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
G A ++ + ++++ + I S++ ++ +E +LG+ F + LL+
Sbjct: 1086 GLSLGRACAQFFDLGLKWDTTSARISTILSRTVTLDQYPAELQYVERMLGYTFERKALLI 1145
Query: 1231 QAFVHPSFNRL--GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ- 1287
+A H S+ Y RLEFLGDAVLD +T Y+++ PG + RS VN
Sbjct: 1146 EALTHASYQEPLPTPSYGRLEFLGDAVLDMAVTPYIFASKKNYSPGHIHLRRSAAVNMHF 1205
Query: 1288 -AF----ANVAVDQSFYKFLIFDSNV--LSETINNYV-DYMITPSST------------- 1326
AF A VAVD+ + D V +E+ + Y+ M+ SST
Sbjct: 1206 LAFVCLRAKVAVDKHMPRPTAPDWRVQMATESQDIYLWQCMLHSSSTVIDDQNNTFARFR 1265
Query: 1327 ---REVKEG--------------PRCPKVLGDLVESSLGAILLDS 1354
+E+ E + PK D+VES +GA+ LD+
Sbjct: 1266 RLEKEISEALETGDIFPWAALTRMQAPKFFSDVVESLIGAVFLDA 1310
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLE +GD VL YL++ LY+ YP G L + V+N A ++V + ++++I
Sbjct: 974 YQRLETMGDTVLKYLVSIQLYAEYPLWHEGYLAKQKDHTVSNVRLAKISVRRHIFQWIIR 1033
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPK--VLGDLVESSLGAILLDSGFNLNTVW 1362
+ N + + + T + ++ K VL D++ES +GA + G +L
Sbjct: 1034 EKNKPKKKKKKDNNQLSTKGTVLKITSELLLTKLSVLADVIESLIGAAYVHGGLSLG--- 1090
Query: 1363 KIMLSFLDPILKF--SNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEA 1412
+ F D LK+ ++ +++ I + Y +LQ+ G F +A
Sbjct: 1091 RACAQFFDLGLKWDTTSARISTILSRTVTLDQYPAELQYVERMLGYTFERKA 1142
>gi|57236094|gb|AAW48724.1| dicer-1 [Aedes aegypti]
Length = 2192
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 159/478 (33%), Positives = 223/478 (46%), Gaps = 109/478 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ ++ V EG+L+ RS V+
Sbjct: 1653 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVS 1712
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L + + +P D PC + + + P
Sbjct: 1713 NLNLYRLGRRKVLGESMIATKFEPHDNWLPPCYYVPKELEQALIDAKIPACHWNLADLPD 1772
Query: 1115 -------RICSKETERTIH------------------SQYDGRAPDDL-NAE-VRCSKGH 1147
IC ER + Q + R + + NAE C +
Sbjct: 1773 IKQLSSEEICRLVKERALALGLLDDSDNEEGETMKEIQQLETRNDEFIKNAEYFACFIPY 1832
Query: 1148 HWLHKKTIAD-----VVEALVGAFIDDSGFKAATAFLKWIGIQV---------------- 1186
+ + + +I D VEAL+GA++ + G + A + W+GI+V
Sbjct: 1833 NLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKVP 1892
Query: 1187 ----EFEAS-----QVTNICISSKSFLPLSASLDMATLEILL-GHQFLH--------RGL 1228
+E V + KS L + A TLE LL G+ R
Sbjct: 1893 GSSQRYEKDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFEDSLGYHHSRSY 1952
Query: 1229 LLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
LLQA H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1953 LLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNN 2012
Query: 1287 QAFANVAVDQSFYKFLIFDSNVLSETINNYVD-------------YMITPSSTREVKEGP 1333
FA++AV F+K+ S L++ I+ +V Y+I+ E E
Sbjct: 2013 TIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLISEDECDEA-EDV 2071
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLEL 1389
PK LGD+ ES GAI LDS +L+ VWK+ S + P I +FSN + +PIRELLEL
Sbjct: 2072 EVPKALGDVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPKSPIRELLEL 2129
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVAL 117
R YQ+EL A E N+I+ L K IA+ LI+EL +RKP ++ I+++ ++
Sbjct: 17 RDYQVELLASAKERNLILCLAHNSSKEFIALKLIHELGSQLRKPAGKRKRTIYISQNDSV 76
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+I + KV + DWE+ +D Y+V++ + L + ++ +
Sbjct: 77 FN----LIRDLTDLKVINV-NDLEDADEDYDWEQIVDDYQVIITDERKCLDAIICGYLDL 131
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
+ LL+ D+CH +V N +K+ D+Y + P+I G+ A P+ G L
Sbjct: 132 NEVNLLVIDDCH--KVYGNEEISKLFIDYYNV-CREKPKILGL-AGPLHNAGC-IPGRLS 186
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ LE L AK + D + + + P + Q P N +SY+
Sbjct: 187 AELEQLEYCLQAKAETASDIVTVLRYCTKPKEILLQCAPPANSNLASYL 235
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 203/488 (41%), Gaps = 85/488 (17%)
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL--GGTI--CHIILPANA 634
+ D + + + ++++YC+KLP D F P + + G + C I +P N+
Sbjct: 747 ETDENSNSVRLSNAIQMVNKYCAKLPSDTFTKLTPLWRGAKTVRNGQELYQCTIRMPINS 806
Query: 635 PIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP------------QEDNATE 681
P+ + IVG P + A++ A A LHK G L+D L P ED E
Sbjct: 807 PLKEDIVGLPMPTEILARRMAAYTACRVLHKAGELDDSLQPIGKESFRAFEADWEDFELE 866
Query: 682 -DEPMLFSSDSDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIPDPA 737
++ + +S+ G R + + + + R + Y +N IP+
Sbjct: 867 SNDAQIVIENSEPRPGTTKRRQYYYKRIASAFSECRPTIGSKVYLYHINMTLQCPIPEEQ 926
Query: 738 D----RIY------REFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSG 779
+ +IY + FG+ L+P + +KV L+L R ++ +
Sbjct: 927 NTRGRKIYPPEDSPQGFGILTTKLIPKVSAFPIFTRSGEVKVALNLCDERPILNQ----- 981
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKN--SVDWKI 837
Q ++ MF+ + +++ L D E+ + ++P I ++ +VDW
Sbjct: 982 -EQLERIH-MFINYTFTKVLRLQKYLMLYDPDAMENC----FFIVPTITRESVVTVDWNF 1035
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESD-VENSLVYATHK-----KWFY 891
I T +VD+ +P+ P + ++ +S+ ++++V ++ ++FY
Sbjct: 1036 I---------DTIAKNVDK--MPTFIPDENRKNYTFDSNQFKDAVVMPWYRNQDQPQYFY 1084
Query: 892 LVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH---- 947
V I + + S + + S+ ++ Y I +++ KQPLL N L
Sbjct: 1085 -VAEICYHLSPKSSFPGLNYSTFEEYYYKKYSIQIQNCKQPLLDVDHTSARLNFLTPRYV 1143
Query: 948 NRK-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLEN 998
NRK E+++ + E E L PELC I F + + LP I++R+
Sbjct: 1144 NRKGVALPTSSEETKRAKRENLEQKQILIPELC--TIHPFPASLWRAAVCLPCILYRINA 1201
Query: 999 LLVAIELK 1006
LL+A E++
Sbjct: 1202 LLLADEIR 1209
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+ +L++FR E NLL+ T V EEG+D+ C LVIR++ P + S++Q +GRAR + +
Sbjct: 553 EEVLKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARASTAYHI 612
Query: 534 FLV--DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
V S Q +L ++ S +RMN I +++ + T +E+
Sbjct: 613 LFVTPKSDAQNCANLCEDLS---ERMNHYICEKSIAKLNTVNED 653
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 1005 LKHLLS--ASFPE--GAEVSAEMLLKALT-TEKCQERFS--LERLEILGDAFLKYAVGRH 1057
L+HLL ++F + G S LL+A+T C R + +RLE LGDA L Y + RH
Sbjct: 1930 LEHLLDGYSAFEDSLGYHHSRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRH 1989
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
L+ G LT RS VNN+ LA R++ Y R P + R RI
Sbjct: 1990 LYEDPRQHSPGALTDLRSALVNNTIFASLAVRHDFHKYFRH--LSPGLNDVIDRFV-RI- 2045
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
++ I +Y L +E C + K + DV E++ GA DS
Sbjct: 2046 QQDNGHIISEEY------YLISEDECDEAEDVEVPKALGDVFESVAGAIFLDSNM 2094
>gi|116788280|gb|ABK24820.1| unknown [Picea sitchensis]
Length = 330
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 173/318 (54%), Gaps = 21/318 (6%)
Query: 1145 KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
KG+ + K +ADVVEAL+GA ++ G A +F+KW+G+ ++ + + K
Sbjct: 19 KGYRMMKTKNVADVVEALIGACLETGGETVALSFVKWLGMDIDIPQ----EMPFTRKLDT 74
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR--LGGCYQRLEFLGDAVLDYLITS 1262
+++++ LE LL + F L++++ H S+ GCYQRLEFLGDAVLDYLIT
Sbjct: 75 GFVSNVNVRYLESLLKYSFRVHTLVVESVTHASYKEPSFSGCYQRLEFLGDAVLDYLITL 134
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
Y Y YP L PG LTDLRS VNN +A AV + ++ L S+ L I + + +
Sbjct: 135 YFYKTYPGLSPGLLTDLRSAAVNNDCYAQAAVKCNLHQQLRHASSELHNQITEFAKLISS 194
Query: 1323 PS---------STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
S +T EV PKVLGDL+ES GA+L+DS F+ VW M L+P++
Sbjct: 195 SSASGDHFFGWTTTEVA----VPKVLGDLIESIAGAVLVDSEFDTQLVWNAMKPLLEPLV 250
Query: 1374 KFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRK 1433
++ P+REL ELC F ++ G + +V K D +I C + +++
Sbjct: 251 TPKTIKYQPVRELQELCQKEFYTCCFDDSQEEGTSTVKVEVRVKG-DSYIETCEAS-NKR 308
Query: 1434 EAIRIASQQLFSKLKAAG 1451
A ++A++++ LKAAG
Sbjct: 309 TAKKLAAEKVLKSLKAAG 326
>gi|240247227|emb|CAX68236.1| dicer-1 [Blattella germanica]
Length = 2271
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 213/486 (43%), Gaps = 118/486 (24%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1725 SPSVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1784
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA------------------------ 1108
N NL +L R + + +P D PC +
Sbjct: 1785 NLNLYRLGRRKVFGESMIATKFEPHDNWLPPCYYVPRELEQALIEAGVPASHWNQADLPA 1844
Query: 1109 ---LGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG------------------H 1147
L R IC ER+ + D L EV + G
Sbjct: 1845 LRDLSRD--EICELVRERSEKLRKTTMGEDGLPEEVLLTSGPYTNIENLPCFIPYNLITQ 1902
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI----------------------- 1184
H + K++AD VEAL+GA++ G + A F+ W+GI
Sbjct: 1903 HSIPDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPKEEVIFSMPCAEVKEIRPV 1962
Query: 1185 ----QVEFEASQVTNICISSK-----------SFLPLSASLDMATLEILLG--------- 1220
V+ C+ K S L S S A L LL
Sbjct: 1963 GSTTSVQINGDNTETSCLQWKQVRYGNLKPPRSPLLRSVSNPEAELRRLLDGYDVFERRI 2022
Query: 1221 -HQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
++F R LLQ+ H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LT
Sbjct: 2023 RYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALT 2082
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST----------- 1326
DLRS LVNN FA++AV F+K+ S L+E ++ +V T
Sbjct: 2083 DLRSALVNNTIFASLAVRYGFHKYFRHLSPGLNEVVDRFVRIQEENGHTISEEYYLIEEE 2142
Query: 1327 -REVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPI 1383
E E PK LGD+ ES GAI LDSG +L+ VW++ + I +FS N+ +PI
Sbjct: 2143 ECEEAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRMMKSEIEQFSTNVPKSPI 2202
Query: 1384 RELLEL 1389
RELLEL
Sbjct: 2203 RELLEL 2208
Score = 123 bits (309), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 167/675 (24%), Positives = 280/675 (41%), Gaps = 113/675 (16%)
Query: 428 IVFVNRIVTARALSYILQNLK-------FLASWRCHFLVGVNAGLKSMSRNA------MK 474
IVFV+ TA+ L ++L +L+ FL + + V A S R A +
Sbjct: 662 IVFVDHRFTAKILYHLLNDLRRFDEDFTFLMA---QYTVDKVADPISDPREAEIEHRKQE 718
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR E NLLV T V EEG+D+ C LVI F++P+ S++QS+GRAR + Y
Sbjct: 719 EVLKRFRMRECNLLVGTSVLEEGIDVPKCNLVIHFNVPQVYRSYVQSKGRARAQDAYYIL 778
Query: 535 LVDSGNQREL--DLIKNFSKEEDRMNREIMDR-------TSSDAFTCSEERIYKVDSSGA 585
+++ ++ DL + F E+ + R+ +R + +D +T DS +
Sbjct: 779 MIEEDRSKQFVNDLAQYFEIEQ-MLLRKCANREPTEEEESEADKYTDLIPSYCPSDSPNS 837
Query: 586 -CISAGYGVSLLHRYCSKLPHDEFFNPKP----KFYYFDDLGGTICHIILPANAPIHQ-I 639
++ V+L++RYC+KLP D F P K + L IC + LP N+P+ Q I
Sbjct: 838 PSVNMATAVALVNRYCAKLPSDTFTRLTPMWNVKTTSDNGLISFICTVRLPINSPVKQDI 897
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-------------QEDNATEDEPML 686
VG P S A++ A L+ + LHK L+D L+P E E M+
Sbjct: 898 VGLPMPSRVLARRIAALETCKVLHKTQELDDNLMPVGKESFRVHEEEETTLALEELEEMV 957
Query: 687 FSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI-PDPAD------R 739
++ G R + + + L P L M P P + +
Sbjct: 958 PRDSTEPRPGTTKRRQYYYKRIADSLTDCRPIPGQPAYLYHISMVLTCPLPEEQNTRGRK 1017
Query: 740 IY------REFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ 785
IY + FG+ +P + ++V L L+ V+T P + +
Sbjct: 1018 IYPPEDSPQGFGILTLKQIPKICPFPIFTRSGEVRVKLELSGSDVVLT---PDKLEKIVT 1074
Query: 786 FQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS---VDWKIIRRCL 842
F +L ++ F P +S Y ++P +K S VDW + R
Sbjct: 1075 FLNYTFTSVLRLQKYLMMFDP--------QASENSYFIVPTRKYKGSIAEVDWDFLDRIY 1126
Query: 843 SSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLVYATHK-----KWFYLVTNI 896
+R P P + G++ E + ++++ ++ ++FY V I
Sbjct: 1127 E-----------NRDLRPRPVPEEERAGFTFEATKYHDAVIMPWYRNQDQPQYFY-VAEI 1174
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK-- 950
N S + S+ + ++ Y I +++ KQPLL N L NRK
Sbjct: 1175 CGHLNPKSTFPGSEYKTFDEYYFKKYNIQIQNSKQPLLDVDHTSARLNFLTPRYVNRKGV 1234
Query: 951 -----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
E+++ + E E L PELC + F + LP I++R+ LL+A
Sbjct: 1235 ALPTSSEETKRAKRENLEQKQILVPELCTVH--PFPASLWRKAVCLPCILYRINALLLAD 1292
Query: 1004 ELKHLLSASFPEGAE 1018
+++ ++ S G E
Sbjct: 1293 QIRRHVAFSIALGHE 1307
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 10/212 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAPTVA 116
R+YQ+EL A E NIIV L TG GK IA LI ELA+ +R+P +++ TVA
Sbjct: 17 REYQVELLDAAKERNIIVCLATGSGKIFIATKLIQELANAVRRPFHKDGKRTLYVVDTVA 76
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+V QQA I V + + + DWE+E + +VLVM QI L + ++
Sbjct: 77 MVAQQASYIRHLTDLTVGEYVSSEAVEMWDNEDWEQEFLENQVLVMTSQICLDIMECSYL 136
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+M + L+I DECH A HP +IMK++ + PRI G+TA P++
Sbjct: 137 QMNYLNLIILDECHRAL--REHPIRQIMKEYIT--CCEKPRILGLTA-PLLNSTCDP-GR 190
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
L I LE +L + + D + + + P
Sbjct: 191 LEGEIRRLELVLHSSAETASDIVSVLRYCTKP 222
Score = 49.3 bits (116), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L GH ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1718 LQGHPGPSPSVILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLS 1776
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1777 HLRSKQVSN 1785
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 187 bits (474), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 189/678 (27%), Positives = 307/678 (45%), Gaps = 91/678 (13%)
Query: 50 KTDKDPKQIA---RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS 106
+T++ P A R YQLE+ +++++N+IV + TG GKT +AVL I A L R
Sbjct: 72 ETNRSPSATAMNPRAYQLEMLDQSLKQNVIVVMDTGSGKTQVAVLRIK--AELDRSAPDK 129
Query: 107 ICIFLAPTVALVQQQAKVIE-ESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQ 164
I FLAPTVAL QQ VI ++ ++ G + D W+ +D V+V Q
Sbjct: 130 IIWFLAPTVALCGQQFDVIRLQAASVPMKLITGNDQVDTWSADTWDTILDGVRVVVSTYQ 189
Query: 165 ILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMT 221
+LL L H FI ++ ++L+IFDE HP +KIM DFY K +P I G+T
Sbjct: 190 VLLDALCHAFINIDRLSLIIFDE-------GKHPGSKIMTDFYHRNKHTAESIPNILGIT 242
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVR--VYQYGPVI 278
A+P + + +++ LE +LDAK S E+L V P + +Y +
Sbjct: 243 ATPSMTEDL-------ENMEILEAVLDAKCISPTRHREELLKCVKRPQIYSILYDAPRSL 295
Query: 279 NDTSSSYVTCSEQLA-EIKREQYI------------SALSRKLHDHQSLRNTTKQLNRLH 325
T S Y E L +I + YI AL R + + + Q+ L
Sbjct: 296 QYTESMYRLRREFLNLDITEDPYILRLQEDPSDRNCRALVRAVEKYDTF--VQNQIKGLW 353
Query: 326 DSMKFCLENLGVCGA------LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE 379
L+ LG A ++++ + + N+ ++AE + D F + S
Sbjct: 354 GRSVEILQQLGTWAADMYIWKSASAFLARTNTNGIFNDWLDAEKKYLAD----FIRRVSP 409
Query: 380 VFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARA 439
A + G +++E L+ + ++ C++FV TA A
Sbjct: 410 SCPAPMPQSGSEVSEKATALVRE---------LVSV------EESTICLIFVKERATASA 454
Query: 440 L-SYILQNLKFLASWRCHFLVGVN---------AGLKSMSRNAMKSILEKFRSGELNLLV 489
L +++ + + R +VG + + L S + M + L+ FRSG++N+L+
Sbjct: 455 LREFLMSCPRIVEKHRIGSMVGTSNYQSRKLTLSELIGQSSDQMAA-LQSFRSGKINILI 513
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD---SGNQRELDL 546
AT V EEG+D+ C +VI FD P T SF+Q RGRARM +S+ L + S + L
Sbjct: 514 ATSVLEEGIDVPACNMVICFDHPATPKSFVQRRGRARMKESKLILLSEYSSSAVGKWEAL 573
Query: 547 IKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHD 606
+N REI S + S +V+S+GA + S L +C L
Sbjct: 574 EENMKAVYQDTQREIRTIQSLEDSEESSSTFMEVESTGARLDFENAKSHLEHFCRVLSQG 633
Query: 607 EFFNPKPKF--YYFDDLGGT-----ICHIILPANAP--IHQI-VGTPQSSMEAAKKDACL 656
+F + +P + + +D + ++LP+ P + QI + S + A KDA
Sbjct: 634 DFVDSRPDYITHSHEDWDSSSKPMLSATVLLPSLVPAQLRQIDSKSSWRSEKNATKDAAF 693
Query: 657 KAIEDLHKLGALNDYLLP 674
+A + L++ G +N++LLP
Sbjct: 694 QAYQTLYQAGLVNEHLLP 711
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 180/411 (43%), Gaps = 76/411 (18%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEILG 1046
L+PS++H LE L+A EL S + E ++ L++ A+++ E + ERLE LG
Sbjct: 957 LIPSLIHELEVTLIAKEL----STTLLERINITDLGLVREAISSRSAAEPVNYERLEFLG 1012
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LKY + +H EG L+ + V NS L + A L +I + F ++
Sbjct: 1013 DSILKYCTAIQVSAIHPEWPEGYLSFFKDRLVGNSRLSRAAIDVGLAKFILTKSFTGQKW 1072
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
L Y G +V K + KT+ADVVEAL+GA
Sbjct: 1073 RPL---------------YLDNYTGNP-----GKVSPRK----ISTKTLADVVEALIGAS 1108
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD-----MATLEILLGH 1221
+ G A + +++++ ++ + F ++ D + LE L+G+
Sbjct: 1109 YINGGITKAQNCISLFVNEIQWQ-----DVSANRALFFKMARDQDVLPAELKPLEHLVGY 1163
Query: 1222 QFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
QF + LL++A H S F+ Y+ LEF+GDA+LD++I +Y+ P L P Q+ L
Sbjct: 1164 QFKKKSLLIEAMTHQSCMFDYNRRSYEHLEFIGDAILDFIIVRKMYTAGPLLAPYQMHSL 1223
Query: 1280 RSMLVNNQAFANVAVDQSFYK--------FLIFDSNVLSETINNYVDYM-----ITPSST 1326
++ +VN A +++D + I D + ++ + I ++T
Sbjct: 1224 KTAMVNGDFLAFLSLDHQMRRTETAVTSSLQIIDKETTPLALWTFMRHSSEAIGIEQAAT 1283
Query: 1327 RE------------VKEGPRCP----------KVLGDLVESSLGAILLDSG 1355
+ +++G R P K D+ ES LGA+ +DSG
Sbjct: 1284 LKRYEALRGEILAALRQGSRYPWALLARLQAKKFYSDIFESLLGAVWVDSG 1334
>gi|303315249|ref|XP_003067632.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240107302|gb|EER25487.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1448
Score = 186 bits (473), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 179/669 (26%), Positives = 311/669 (46%), Gaps = 66/669 (9%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + AR YQLE+ +++ +NIIV + TG GKT IA+L I L R P F+APT
Sbjct: 43 PPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQR--ELERCPAHKFVWFMAPT 100
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSKRLKSHCD----WEKEIDQYEVLVMIPQILLYC 169
VALV+QQ I + + F+ R G + SH W+ + +++ PQ+LL
Sbjct: 101 VALVEQQHSAISKQLPAFQTRLLTGAAN--VSHWSTKKIWDDILLNIRIVISTPQVLLDA 158
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKVPRIFGMTASP 224
L + F+ + I+LL+FDE HH + P +IM+DFY + +P I G+TASP
Sbjct: 159 LSNGFVNLHTISLLVFDEAHHC--VRDAPANRIMRDFYHYHRQEEGTDGLPHILGLTASP 216
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
+ L ++N++ + K++ E++ F+ P +Y P + + SS
Sbjct: 217 TTRARQTDLEVLEINLNAV--CVTPKMHR----EEMMQFIHMPEYCSIEYQPDVQNFSSI 270
Query: 285 YVTCSEQLAE--IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC---- 338
S + E I+ + ++ + R+ L++ + L+ + CL+ L C
Sbjct: 271 VEKLSVIINELDIENDPFVKFMRRR----NDLKSRQRLLDAFENKKTPCLDQLKRCLRRS 326
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
+H + + + ++ + I+ S ++A E + + + ++ +S E
Sbjct: 327 RVIHRELGPWASERFLTRCIMGLKSKQINASGPQWADWDREDNSYML--NVLSQVVSSTE 384
Query: 399 V-LKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKFLASWR 454
+ ++ P +L R + L F + +H+ IVF L+ +L +
Sbjct: 385 MGVQNP--PDELSRKVHKLIDFLVLEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIK 442
Query: 455 CHFLVGVNAGLKSMSRNA----------MKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+G +A S+SR + + ++ R+G+ +L++AT V EEG+D+ C
Sbjct: 443 TTAFLGSSA---SVSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICD 499
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNREI 561
LVI FDLP+ + SFIQ RGRAR S++A + D EL L++ K+ N+
Sbjct: 500 LVICFDLPKDLRSFIQRRGRARKKGSKFALFLHSEDRATSSELHLMEKTMKQLYLENKRT 559
Query: 562 MDRTSSDAFTCSEERIY---KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY- 617
++ EE Y +V S+GA ++ + L +C L EF P+F
Sbjct: 560 LEHIQ--YLENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTLS-AEFIATDPEFVLE 616
Query: 618 FDDLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLLP 674
DD G +ILP+ + + + G E AK+DA +A L++ G +NDYL+P
Sbjct: 617 GDDTTGFSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Query: 675 QEDNATEDE 683
+ +++
Sbjct: 677 AHHHIDDED 685
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 39/328 (11%)
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
D LP E Q + +P ++H +EN +A EL + P G + +
Sbjct: 930 DRLPVEYSQFAL------------FIPCLIHSIENYFIANELAQTIL--HPVGFS-NLSL 974
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L A+++ +E + +RLE LGD+ LK L H EG LT R+ N V+N L
Sbjct: 975 VLTAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYL 1034
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
A + L +I +PF ++ + + T H D+ R
Sbjct: 1035 ANAALQTGLDKFILTKPFTGAKW------------RPSYNTDHINTG-----DMTEPTRE 1077
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKS 1202
+ K +ADVVEAL+GA D G LK +++ ++ NI +
Sbjct: 1078 ------MSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQQD 1131
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+ ++ +E L+G+ F + LLL A HPS G YQRLEF+GD++LD ++
Sbjct: 1132 SFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSSKGSGHSYQRLEFVGDSILDIIVVQ 1191
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
L+ + +R+ LVN A
Sbjct: 1192 ELFESPRGFHHFDMHLMRTALVNADFLA 1219
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F + L+L A + S R YQRLEFLGD++L + L + +P G+LT +
Sbjct: 969 FSNLSLVLTA-ISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGN 1027
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-VDYMITPSSTREVKEGPRCPKVLGD 1341
+V+N AN A+ KF++ ++ +Y D++ T T +E KVL D
Sbjct: 1028 VVSNGYLANAALQTGLDKFILTKPFTGAKWRPSYNTDHINTGDMTEPTRE--MSTKVLAD 1085
Query: 1342 LVESSLGAILLDSGFNLNTVWKIM--LSFLDPILKFSNLQ 1379
+VE+ +GA +D G N KI+ L P +K+S L
Sbjct: 1086 VVEALIGAANIDGGEN-----KILNCLKIFIPDIKWSPLN 1120
>gi|341893002|gb|EGT48937.1| CBN-DCR-1 protein [Caenorhabditis brenneri]
Length = 1927
Score = 186 bits (473), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 208/458 (45%), Gaps = 82/458 (17%)
Query: 1016 GAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
G VS +LL ALTT + SLER E +GD+FLK+A +L+ EG+L+ RS
Sbjct: 1404 GMGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARS 1463
Query: 1076 NAVNNSNLLKLAARNNLQVYIRDQPFD-------PCQFFALGRRCPRICSKE-----TER 1123
V+N NL +L + + I FD PC + P E ER
Sbjct: 1464 KEVSNCNLYRLGKKLGIPQLIIANKFDAHDSWLPPCYIPTCNFKAPNTDDAEEKDIEMER 1523
Query: 1124 TIHSQYDGRAP----------------------------------DDLNAEVRCSKGHHW 1149
++ + P +D++
Sbjct: 1524 LLNGETIEEKPQNKTGWDMELKDEAKTTTEKIETITFPKRTALVNEDISPLPYNLLTQQN 1583
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL----- 1204
+ K+IAD +EAL+G + G + W+G++V + VT++ F+
Sbjct: 1584 ISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKV-IQKDAVTDVAAPLLRFIDTPTN 1642
Query: 1205 PLSASLDM---------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
P ++++ + A LE +G++F R L+QAF H S+ NR+ GCYQRLEFLGD
Sbjct: 1643 PNASTIQLDNLWQQFQFAKLEEKIGYRFKERAYLVQAFTHASYSNNRVTGCYQRLEFLGD 1702
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLDY+IT +L+ + PG LTDLRS LVNN FA++AV F K I L I
Sbjct: 1703 AVLDYMITRFLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKYEFQKHFIAMCPGLHHMI 1762
Query: 1314 NNYVD---------------YMITPSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGF 1356
+V YM+T + PK LGD+ ES GAI LDSG
Sbjct: 1763 EKFVQLCADRNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGR 1822
Query: 1357 NLNTVWKIMLSFLDPILKF--SNLQLNPIRELLELCNS 1392
NL+T W+++ + ++ +N +PIREL+EL +S
Sbjct: 1823 NLDTTWQVLFHMMRSTIESCCANPPRSPIRELMELESS 1860
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 166/715 (23%), Positives = 302/715 (42%), Gaps = 124/715 (17%)
Query: 402 EPFFSKKLLRLIGILSTFRLQ-----------QHMKCIVFVNRIVTARALSYILQ----- 445
E + +++RL + F +H+ I+FVN+ A +L +++
Sbjct: 352 ERYVPHRIIRLFQVFEMFNPDFQKQRMALEKTEHLSAIIFVNQRYIAYSLHIMMRAIRQW 411
Query: 446 --NLKFLASWRCHFLVGV---------NAGLKSMSRNAMKSILEKFRSGELNLLVATKVG 494
KFL + F+VG N GL+ +A++ KF G+LN+L+AT V
Sbjct: 412 EPKFKFLNT---DFVVGASGPNMANSNNQGLQKRQTDALR----KFHRGDLNVLIATSVL 464
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKE 553
EEG+D++ C +VI+FD P + S++QS+GRAR S Y LVD + D +K+F +
Sbjct: 465 EEGVDVKQCNVVIKFDRPTDMRSYVQSKGRARKAGSRYVVLVDQKDTSACDSDLKDFQQI 524
Query: 554 EDRM---NREIMDRTSSDAFTCSEE-----RIYKVDSSGACISAGYGVSLLHRYCSKLPH 605
E + +R + + T D+ T + Y V+ +GA I ++L++RYC+KLP
Sbjct: 525 EKILLSRHRTVNNPTEDDSLTDLGDVDDLMAPYVVEKTGATIKMSNAIALVNRYCAKLPS 584
Query: 606 DEFFN--PKPKFYYFDDLGGT--ICHIILPANAPIHQ--IVGTPQSSMEAAKKDACLKAI 659
D F P +D G T ++LP N+PI I+ P + +AA+ L+A
Sbjct: 585 DIFTRLVPNSTIIPVEDHGVTKYCAELLLPINSPIKHAIILKDPMPNKKAAQMAVALEAC 644
Query: 660 EDLHKLGALNDYLLPQEDNA-------TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVL 712
LH G L+D LLP+ + +DEP ++ + G R +L++ + L
Sbjct: 645 RQLHLKGELDDNLLPKGRESIAKLLEQMDDEPDEYAPGMAAKVGSSKRKQLYDKKIARAL 704
Query: 713 RQSWTKSQYPVRLNFYFMQFI----PDPADRIYRE---------FGLFVKSLLPG----- 754
+S + + + ++ + P P R R FG +P
Sbjct: 705 NESHVEPEKECYIYALELERLRDSEPSPNTRRRRFEDPKEYEYCFGFLSTKEIPKIPPFP 764
Query: 755 ---EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDD 811
++KV L LA ++ +TK + + Q F +L + G +
Sbjct: 765 LFLRQGNMKVRLTLAPQKTTVTK---EQLEEIQYFHNYLFTQVL-------QMCKTGNLE 814
Query: 812 YCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGW 871
+ ++++ L+ + + I + +S G + +++P ++ +
Sbjct: 815 FDVTANAPLNTLIVPLNKSKEEGYSINMKYVS-------GVVANMENMPRVPTDEVRRKF 867
Query: 872 SSE-SDVENSLVYATHKKW----FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHL 926
+ + ++++V ++ FY V I+ + S + D + ++ ++ I Y + +
Sbjct: 868 KFDPENYKDAVVMPWYRNMEQPAFYYVAEILTDLRPSSQFPDHNFTTFNEYFIKKYNLEI 927
Query: 927 KHPKQPLLRAKPLFRLRNLLHNR----------------------KLEDSESHELEEYFD 964
+Q LL NLL R E ES
Sbjct: 928 YDQEQSLLDVDFTSNRLNLLLPRIQSQARRARSFSGSSTSSAPPTPSESRESGPHPSQRQ 987
Query: 965 DLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH-LLSASFPEGAE 1018
L PEL + I S + + ++ LPSI +R+ LL++ EL+ +L +F +G+E
Sbjct: 988 ILIPELMDVHPI--SATLWNVIAALPSIFYRINQLLLSDELRETILVKAFGKGSE 1040
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 115/215 (53%), Gaps = 10/215 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA ++N IV LGTG GKT IAVLL+ E + P F+ V
Sbjct: 14 RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPLDQGGKRAFFIVEKVN 73
Query: 117 LVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV+QQAK IE FKV G S+ KS EK + + V+V+ Q LL + H F
Sbjct: 74 LVEQQAKHIEVHTSFKVGQVHGQTSSELWKSPVACEKFMKENHVVVITAQCLLDFINHAF 133
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVGKGASA 232
IK++ +LIFDECHHA + S HPY IM + K VPR+ G+TAS + K A
Sbjct: 134 IKIQDTCVLIFDECHHA-LGSKHPYRLIMTKYKELKKAGEPVPRVLGLTASLI--KEKVA 190
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
L + + LE++LD+ + + D L + + P
Sbjct: 191 PEKLSEQLVKLESVLDSVIETASDLVSLTKYGAKP 225
>gi|378734261|gb|EHY60720.1| hypothetical protein HMPREF1120_08668 [Exophiala dermatitidis
NIH/UT8656]
Length = 1469
Score = 186 bits (472), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 190/686 (27%), Positives = 300/686 (43%), Gaps = 85/686 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQ+E+ + +M+ N+I +GTG GKT +A L I A R P K I F AP+V L
Sbjct: 26 SRAYQIEMFEHSMKGNVIAVMGTGTGKTQVAKLRIE--AEFERSPIKRIW-FTAPSVVLA 82
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ + + F+ R G ++ + W+K + +V P ILL L F+
Sbjct: 83 YQQYCFLSWQLPAFQFRLITGMDNAEFWDTQEVWDKALHNINGVVSTPAILLQALDGGFV 142
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-----IMKVPRIFGMTASPVVGKGA 230
M+ I+LL+ DE HH KS IMK Y P ++P I G++ASP+ K
Sbjct: 143 SMKTISLLVVDEAHHCVAKSL--VNTIMKVHYHPVKKANCPYELPHILGLSASPITKKS- 199
Query: 231 SAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
P I LE LDA+ + ++ E+ +FV+ P + + + + + S
Sbjct: 200 ------PAEITELEANLDAQCKTPLQQLEEYTAFVNMPEIVILTFDEEMTPDARLLTQLS 253
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
+++++ + +KL + + K +H G A+ LL
Sbjct: 254 SLVSDLRFTD--DPIMKKLQEKDDQKAAEKLRKIIHK---------GATPAMTELNTLLR 302
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
T++ +L T + R A A + G+ D PF L
Sbjct: 303 SATTIQQDLGRWACETYITACVRKLHCAVRNAAGLEIHPGLTHD-------NRPFMESTL 355
Query: 410 LRL---------------------IGILSTFRLQQH---MKCIVFVNRIVTARALSYILQ 445
L + IL F +++ ++ ++FV+ TA AL+ ++
Sbjct: 356 RPLHASLGAPGGGSLSSPEDLSAKVAILLNFLRKEYRSDVRGLIFVHARHTAWALTEVIN 415
Query: 446 NLKFLASWRCHFLVGV-NAGLKSMSRNAMKSI----LEKFRSGELNLLVATKVGEEGLDI 500
+ ++++R VGV N + A I LE+FR G+LNL +AT V EEG+D+
Sbjct: 416 SHPAMSNYRAFSFVGVSNPAYQGAFDFAQLHIQFENLERFRRGQLNLCIATSVLEEGIDV 475
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN-- 558
+ LVI FD + SF+QSRGRAR S+Y L S IK+F E M
Sbjct: 476 PSMNLVISFDARPNLRSFVQSRGRARQRNSKYVELRSS--LEPYSKIKSFEAWEADMKRK 533
Query: 559 -----REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHD-EFFNPK 612
R++ R ++ I++V S+GA ++ L R+CSKLP + + P+
Sbjct: 534 CESSLRDLEARKVVESLKEEGGSIFRVPSTGATLTFDNARQSLQRFCSKLPRNADSEPPE 593
Query: 613 PKFYYFDDLGGTI-CHIILPANAPIHQIVGTPQSSMEA---AKKDACLKAIEDLHKLGAL 668
P F ++G I + LP P H V + Q + AKKDA A L+K G +
Sbjct: 594 PIFCLEGEIGLRIFAKVYLPTCLPPHLHVVSSQLGWQTERMAKKDAAFHAYLGLYKAGLV 653
Query: 669 NDYLLP---QEDNATEDEPMLFSSDS 691
N+ L P +D E EP + + +S
Sbjct: 654 NENLQPIHWPKDGNGEAEPDIETRES 679
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 133/318 (41%), Gaps = 39/318 (12%)
Query: 966 LPPE-----LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
LPP+ + Q ++G D + L+PSI H LE L A P V
Sbjct: 882 LPPQQRSLPVDQCVLLGVPVDYARLMLLVPSITHMLEVCLRTAAACQGPLAGLPL---VD 938
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
+++ +ALT + R + ERLE LGD LK+ F+ + T E LT R+ VNN
Sbjct: 939 MDLVSEALTLPRVGPR-NYERLEFLGDDLLKFYTSIQGFVDNPTYPESGLTIARNRIVNN 997
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
+ L + L+ ++ F ++ A SKE +R H D +
Sbjct: 998 ARLQRATRTLALEQFLTQHRFSGAEWTA-------GVSKE-DREGHG-------DSTDTV 1042
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAF-------------IDDSGFKAATAFLKWIGIQVE 1187
K H L KT+ADV+EAL+GA I+ + A L+ +V
Sbjct: 1043 AHGEKTH--LSSKTLADVIEALIGAASLNGSTTTTNGDNIESRSQEGVIAALRLFLEEVP 1100
Query: 1188 FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQR 1247
+ + I ++ A +E L+G++F LL +A Y R
Sbjct: 1101 WRPVSENLVRIHVMDDSEITGYQLYAPVESLIGYRFTRHALLAEALTQSWLGGQVSSYDR 1160
Query: 1248 LEFLGDAVLDYLITSYLY 1265
LEFLGDAVLD+++ L+
Sbjct: 1161 LEFLGDAVLDHIVKQALF 1178
>gi|330944921|ref|XP_003306459.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
gi|311316023|gb|EFQ85435.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
Length = 1448
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 186/689 (26%), Positives = 312/689 (45%), Gaps = 86/689 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR--KPQKSICIFLAPTVAL 117
R YQ E+ +++M NIIV + TG GKT IA+ + KP + I FLAPTV+L
Sbjct: 63 RAYQAEMVEESMRANIIVVMDTGSGKTQIAIERTRAELETCQPDKPTRKIVWFLAPTVSL 122
Query: 118 VQQQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
+QQ +V ++ GF + CG + + W+ + ++V Q+L L H F
Sbjct: 123 CEQQHEVFMSNLPGFGHQILCGRDDIEFWTTQRQWDSILTNVRIVVSTHQVLFEALTHGF 182
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKGA 230
+ + +ALLIFDE HH + NHP ++M FY P + +P++ G+TASPV+ A
Sbjct: 183 VTLTKLALLIFDEAHHCTL--NHPANQLMTKFYMPQLHCNSTSLPKVLGLTASPVMKAVA 240
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDA-----EDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ Q LE L++ +Y+ +L +V P + Y T S
Sbjct: 241 TRQG--------LE-LIEQNLYATAKTPKLHRSELMRYVHQPELVQIAYPSAPPGTHHSQ 291
Query: 286 VTCSEQLA----EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK-FCLENLGVCGA 340
+ + Q A +++++ Y+ AL L H + ++QL+RL S K +C + L
Sbjct: 292 LLLALQDAYQTYDLQKDPYLIAL---LDQHSKGYDVSRQLDRLWSSRKTYCYDQLKQ--- 345
Query: 341 LHASYILLSGDETMRNEL---------------IEAEGNTIDDSLCRFASQASEVFAAIC 385
L + E M +EL E D L ++ + +
Sbjct: 346 ------LKNKAEAMADELGTSVMEFYLRQCIATFENMTGIFDQQLLDLSTNERQHLLNVF 399
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ 445
+ + + S + + + K + + +++ +VFV + V +L+ IL
Sbjct: 400 KSLPLNNPTSVPDGILDNLSQKVNILVDTLVAEVEGNPDFTGLVFVEQRVWVASLAEILT 459
Query: 446 ---NLKFLASWRCHFLVGVNAGLKSMSRNAM-------KSILEKFRSGELNLLVATKVGE 495
K L R VG + K S ++ ++ L+ FR+G +NL++AT V E
Sbjct: 460 CHPRTKHLL--RVGTFVGTSKSSKRKSNISVFAEPKNQQTTLDDFRAGIINLVLATSVLE 517
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EG+D+ +C LVI F+ P+ + SF+Q RGRAR +S Y LV + R + +K++ E
Sbjct: 518 EGIDVSSCHLVICFEQPKNLKSFVQRRGRARRQRSRY--LVFVPDTRNVQSVKSWQSLEA 575
Query: 556 RMNREIMD-----RTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF 608
M + D R + + E ER +++S+GA ++ LH +C++L +
Sbjct: 576 EMRKAYEDDNRKVRLAQEKEQVDEYGERYLRIESTGALLTLDNASQHLHHFCARLASGTY 635
Query: 609 FNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS-----SMEAAKKDACLKAIEDLH 663
N P+F + D G + LP + + V T +S + A+KDA +A + L+
Sbjct: 636 ANMTPEFDFTHDHGQITAKVTLPIS--VDPKVRTAKSLKTWVTERMAQKDAAFEAYKALY 693
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSD 692
+ND LLP D ED+ + D
Sbjct: 694 HAKLVNDNLLPVRDEE-EDQAAQYQVRED 721
Score = 107 bits (266), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 54/337 (16%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L PSI+H+LE +VA L+ L E + +L+ ALT+ E +RLE LGD
Sbjct: 963 LFPSIVHKLEVNIVAETLRTTLLKPV-EVDNLHLPVLVTALTSSATNEGNDYQRLEFLGD 1021
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
LK+ HL + + EG LT ++ V+N L + L YI + F ++
Sbjct: 1022 CILKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFYKRFTGAKW- 1080
Query: 1108 ALGRRCPRICSKE-TERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR S E T+ + + + K IADV+E+L+GA
Sbjct: 1081 -----KPRYISLVLAESTLPEKQEKSS-------------------KLIADVIESLIGAS 1116
Query: 1167 IDDSGFKAATAFL-------KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
GF A A + KW + EA ++ + + + + +E LL
Sbjct: 1117 YIIGGFSKAFACVQTLLPLEKWTPLA---EAKEILYNAAPHQDTV-----MSLGLIEKLL 1168
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLG-GC-YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G++F ++ LLL+A H +F L C Y+R EFLGDAVLDY+++ LY+ P+L ++
Sbjct: 1169 GYKFNNKALLLEALTHVTFRGLNTNCSYERHEFLGDAVLDYIVSRKLYAHKPELSHRKMH 1228
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
+R+ +VN SF + +F++ V E N
Sbjct: 1229 GIRTAMVN----------ASFLAYSMFETTVTEELTN 1255
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 1224 LHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
LH +L+ A + N G YQRLEFLGD +L ++ + +L + ++ G LT + L
Sbjct: 993 LHLPVLVTALTSSATNE-GNDYQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKL 1051
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLV 1343
V+N A + +++ + ++ Y+ ++ S+ E +E + K++ D++
Sbjct: 1052 VSNGYLARATLAAGLDQYIFYKRFTGAKWKPRYISLVLAESTLPEKQE--KSSKLIADVI 1109
Query: 1344 ESSLGAILLDSGFN 1357
ES +GA + GF+
Sbjct: 1110 ESLIGASYIIGGFS 1123
>gi|380026731|ref|XP_003697097.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Apis
florea]
Length = 1362
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 201/420 (47%), Gaps = 58/420 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
++ ALTT+ + F+LERLE LGD++LK+ + L+ EG LT + + N NL
Sbjct: 937 VMYALTTKLGNDAFNLERLETLGDSYLKFIISLFLYNQFPKYAEGSLTTIKGKIIGNRNL 996
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFA--------------LGRRCPRICSKETERTIHSQY 1129
N+ ++ F P F L + E + + Q+
Sbjct: 997 YYCGIXKNIPGRMKVDSFVPLSNFIAPAYTVFRQLQDVLLEAKVSPTVLYEIQISQQEQF 1056
Query: 1130 DGRAPDD---------LNAEVRCSKG--HHWL-----HKKTIADVVEALVGAFIDDSGFK 1173
G + LN E+ S+ H+L K +AD VEAL+G ++ + G K
Sbjct: 1057 SGLMTETTKNLIQQKVLNWELAESQTGMEHYLGIQTVSDKAVADCVEALIGVYLRNMGIK 1116
Query: 1174 AATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATL-------EILLGHQFLHR 1226
LKW I +N + S P+ + D+ +L E LG++F +R
Sbjct: 1117 DTLTLLKWFQI---LPNEIDSNTLLFGTSENPIISKGDINSLMPWASEIETKLGYKFKNR 1173
Query: 1227 GLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
G LLQAF HPS+ N + CYQRLEFLGDA+LD+LITSY+Y L PG LTDLRS LV
Sbjct: 1174 GYLLQAFTHPSYSANHMTECYQRLEFLGDAILDFLITSYIYENCGNLNPGSLTDLRSALV 1233
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY--------------MITPSSTREVK 1330
NN FA + V + L+ S L++ I +V + ++ S +
Sbjct: 1234 NNITFACLTVRHGLHIALLCYSPKLNDIIERFVKFQEERNHIVNDELLWILLEESECNIA 1293
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLE 1388
E PKVLGD+ ES +GAI LDS NL VW+I+ S + I +FS N+ PIR L E
Sbjct: 1294 EHVDVPKVLGDIFESIIGAIYLDSNKNLMVVWEIIYSIMHKEIDEFSKNIPKQPIRILYE 1353
Score = 126 bits (317), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 152/634 (23%), Positives = 273/634 (43%), Gaps = 149/634 (23%)
Query: 423 QHMKCIVFVNRIVTARALSYILQNL-------KFLASWRCHFLVGVNAGLKSMSRNAM-- 473
Q CI+FV R TA+ L IL+N+ +FL FL+G + + ++
Sbjct: 290 QEFCCIIFVKRRFTAKLLYQILKNISKNNEEYRFLHP---EFLIGFSNDPYRNCKESLCI 346
Query: 474 ----KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
K L +F++G N +VAT + +EG++I C L+IR+DLP V ++IQS+GRAR
Sbjct: 347 SKWNKEALHRFKNGLSNCIVATDILDEGVNIPKCSLIIRYDLPMDVRTYIQSKGRARHVH 406
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-----------Y 578
S+Y L+D GN R + F + E + ++++T+ +E +I Y
Sbjct: 407 SQYILLLDKGNLRFISRYNEFKRIEQYLQELLLNKTNERNVP-TENKIQNELYQHKIQPY 465
Query: 579 KVDSS---GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI---CHIILPA 632
V S+ CI+ + L+++YC L +F P + + L TI + P
Sbjct: 466 VVISNEGQKCCITEQTAIHLINKYCMSLMKSKFACLSPIWILYKILNNTINDRIQYMFP- 524
Query: 633 NAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSD 692
+ ++ PQ+++ LH L A+ Y +P +DN ++F +
Sbjct: 525 -SALYSAFPLPQNTVY-------------LHILHAIPKYPVPHDDNRY----LVFYNLLC 566
Query: 693 SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLL 752
+ G G +P+ +P+ +N
Sbjct: 567 NSAGFGILSAKQMPQIPS----------FPIFMNI------------------------- 591
Query: 753 PGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGK--- 809
GE L VD+ + ++++ + +F ++F +I SE +P+ K
Sbjct: 592 -GE---LNVDVKVNHATMILSE-------EEVRFIKVFHTLIF------SEIIPVIKSFM 634
Query: 810 --DDYCESSSSTFYLLLPVIFHKNSVDWKIIR--RCLSSPVFGTPGGSVDRKSLPSHGPL 865
D++ + +L+ PV K +++W++I+ +C+ + +P D KS
Sbjct: 635 VFDNF---NFDNCFLITPVD-EKWNINWQVIKHYKCIE---YISPIAPFDFKS------- 680
Query: 866 QLHNGWSSESDVENSLVYATHKKW-FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGI 924
+D E +LV ++ Y+VT + + S + + S+ + +G+
Sbjct: 681 ---------TDYELTLVKPNYRAAETYIVTQVCDDITPNSCFPTDNFLSYAHYYKEKHGL 731
Query: 925 HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP--------PELCQLKII 976
+K+ KQP+L K + R N + R ++ SES + DLP PELC I
Sbjct: 732 TIKNLKQPMLEVKAISRTINYILPRHMQ-SESK--NRRYVDLPKNMKEHLVPELCTK--I 786
Query: 977 GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
F ++LPSI+HR+ LLVA +L++ ++
Sbjct: 787 NFPALYWLKATILPSILHRISQLLVAEDLRYTIA 820
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 111/201 (55%), Gaps = 8/201 (3%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
I R YQ+EL + A ++N+I+YL TG GKT IAV+LI EL+ IRK +F+ T
Sbjct: 9 IPRTYQIELFEIACKQNVIIYLPTGAGKTFIAVMLIKELSADIRKSYDEGGKHTVFIVNT 68
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQ++ I G G + ++ +W ++ +++VLVM QIL+ L H
Sbjct: 69 VPLVMQQSEYITRLTGLSCAALSGDIGIDVWTNTEWNAQLKEHKVLVMTSQILIDALCHG 128
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
+I + I L+IFDECH A ++HP +IM+ F P++ G++A+ ++ +
Sbjct: 129 YIFLNRINLIIFDECHRA--VNDHPMRQIMQYFENYSKEDQPKVLGLSAT-LLNSNVKLE 185
Query: 234 ANLPKSINSLENLLDAKVYSV 254
+ I SLE AKV ++
Sbjct: 186 K-IHSVIESLEITFHAKVVTI 205
>gi|302662009|ref|XP_003022664.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
gi|291186623|gb|EFE42046.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
Length = 1510
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 204/727 (28%), Positives = 317/727 (43%), Gaps = 126/727 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL +KA E+NII L TG GKT IAVLL L H+I + + L P ++
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLL---LKHVIEQELTDRSLGLPPRISFFL 168
Query: 120 QQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+I K+ FCG + L + WE + V+V ++L CL H FI+++
Sbjct: 169 N-------NIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSFIQID 221
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
I LLIFDE HHA K HPYA+I+KDFY + + P+IFGMTASPV A+ +
Sbjct: 222 QINLLIFDEAHHA--KKEHPYARIIKDFYLKEPERKPKIFGMTASPV-----DAKVEVVG 274
Query: 239 SINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTCSEQLAEIKR 297
+ +LE +LD+++ + + L V+ P +++Y + + + Y ++ +IK
Sbjct: 275 AAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSKLRQKFGDIKV 334
Query: 298 EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNE 357
+ I SR+ T+ L C SY L +ET+
Sbjct: 335 LEKIFKFSRE---------TSSSLG-------------SWCSDWIWSYCL--SEETLPK- 369
Query: 358 LIEAEGN------TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLR 411
+EA N D S C ++ AI + ++ E+L K LL
Sbjct: 370 -LEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFGDPVANPELLSR----KVLLL 424
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVNAGLKSMS 469
+L F+ +CIVF + TAR L + + + +++ R + LVGV +G +
Sbjct: 425 RDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKIGSQYI---RPNLLVGVRSGGDKIG 481
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEE--------GLDIQTCCLVIRFDLPETVASFIQS 521
+ FR LN++ KV E G D +RFDL T+ +IQS
Sbjct: 482 LDI------SFREQFLNVIAFRKVNESNEYLIPGLGTDFN-----LRFDLYSTLIQYIQS 530
Query: 522 RGRARMPQS------------------EYAFLVDSGN-----QRELDLIKNFSKE--EDR 556
RGRAR +S ++A +V+ N E +++ F K EDR
Sbjct: 531 RGRARHMESTVCITYLEVSLVQTNIFTQFAHMVERNNLMHETAVEEEVLTRFCKSLPEDR 590
Query: 557 MNREIMD---RTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
+ + D D +++ Y + S+GA ++ +++L Y S L +++ + +
Sbjct: 591 LLKGTGDIDMMIEKD----RQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQV 646
Query: 614 KFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL- 672
+ G IC ILP +PI +G S AK+ A + L K L++Y
Sbjct: 647 SYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETCLLLRKNRLLDEYFI 706
Query: 673 ------LPQEDNA----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR----QSWTK 718
LP NA T + +S S E SRGE +L VL + K
Sbjct: 707 STYHKRLPVMRNARLAITSKKSNKYSMISKPAAWELSRGESPTVLYATVLSLSDCEKLQK 766
Query: 719 SQYPVRL 725
S +P+ L
Sbjct: 767 SYHPIVL 773
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 217/476 (45%), Gaps = 75/476 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSSLSL 988
QP+LR++ + RN L +++++ +Y+ +C LKI S + + + +
Sbjct: 954 QPVLRSELIQLRRNFL---DIDENQKSPPVDYY------VCAEALKISAISVPLATQIFV 1004
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQE------RF--- 1037
P+++ R+E+ L+A+E L P E+ L+ALT +E +E RF
Sbjct: 1005 FPAMIWRMESYLIALEACEKLQLKIP------PELALEALTKDSENTEEHGMEQIRFQSG 1058
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ ERLE LGD FLK A LF ++ DE + +R + N NL A +
Sbjct: 1059 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFK 1118
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR + F ++ G + + P+ H L KT
Sbjct: 1119 FIRSRSFSRRAWYPEGLTL-----------LKGKDKKEGPNG---------PEHALADKT 1158
Query: 1155 IADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
IADV EAL+GA + D KA T F+ +VE A + +
Sbjct: 1159 IADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASA 1218
Query: 1207 SAS-LDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLIT 1261
SAS +D+A ++ LG+ F + LL AF+HPS+ CYQRLEFLGD++LD +
Sbjct: 1219 SASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDSLLDMVCV 1278
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++L+ YP P LT+ + +V+N+ ++AV + + LI SN L I +Y + +
Sbjct: 1279 NHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQ 1338
Query: 1322 TPSSTRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
E E P+C L D+VE+ LGAI +DS FN + V F+
Sbjct: 1339 AMKIKMEGNLEAWTYTNEPPKC---LPDIVEAYLGAIFVDSNFNFDVVDDFFRKFI 1391
>gi|302511053|ref|XP_003017478.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
gi|291181049|gb|EFE36833.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
Length = 1510
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 204/727 (28%), Positives = 317/727 (43%), Gaps = 126/727 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL +KA E+NII L TG GKT IAVLL L H+I + + L P ++
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLL---LKHVIEQELTDRSLGLPPRISFFL 168
Query: 120 QQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+I K+ FCG + L + WE + V+V ++L CL H FI+++
Sbjct: 169 N-------NIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSFIQID 221
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
I LLIFDE HHA K HPYA+I+KDFY + + P+IFGMTASPV A+ +
Sbjct: 222 QINLLIFDEAHHA--KKEHPYARIIKDFYLKEPERKPKIFGMTASPV-----DAKVEVVG 274
Query: 239 SINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTCSEQLAEIKR 297
+ +LE +LD+++ + + L V+ P +++Y + + + Y ++ +IK
Sbjct: 275 AAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDRLELPFETPLYSKLRQKFGDIKV 334
Query: 298 EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNE 357
+ I SR+ T+ L C SY L +ET+
Sbjct: 335 LEKIFKFSRE---------TSSSLG-------------SWCSDWIWSYCL--SEETLPK- 369
Query: 358 LIEAEGN------TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLR 411
+EA N D S C ++ AI + ++ E+L K LL
Sbjct: 370 -LEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFGDPVANPELLSR----KVLLL 424
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVGVNAGLKSMS 469
+L F+ +CIVF + TAR L + + + +++ R + LVGV +G +
Sbjct: 425 RDQLLRRFKENPDTRCIVFTAQRHTARILRDLFKKIGSQYI---RPNLLVGVRSGGDKIG 481
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEE--------GLDIQTCCLVIRFDLPETVASFIQS 521
+ FR LN++ KV E G D +RFDL T+ +IQS
Sbjct: 482 LDI------SFREQFLNVIAFRKVNESNEYLIPGLGTDFN-----LRFDLYSTLIQYIQS 530
Query: 522 RGRARMPQS------------------EYAFLVDSGN-----QRELDLIKNFSKE--EDR 556
RGRAR +S ++A +V+ N E +++ F K EDR
Sbjct: 531 RGRARHMESTVCITYLEVSLVQTNIFTQFAHMVERNNLMHETAVEEEVLTRFCKSLPEDR 590
Query: 557 MNREIMD---RTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
+ + D D +++ Y + S+GA ++ +++L Y S L +++ + +
Sbjct: 591 LLKGTGDIDMMIEKD----RQQKSYTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQV 646
Query: 614 KFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL- 672
+ G IC ILP +PI +G S AK+ A + L K L++Y
Sbjct: 647 SYIIHPKDGAFICETILPEKSPIRGCMGKSASRKLLAKQSAAFETCLLLRKNRLLDEYFI 706
Query: 673 ------LPQEDNA----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR----QSWTK 718
LP NA T + +S S E SRGE +L VL + K
Sbjct: 707 STYHKRLPVMRNARLAITSKKSNKYSMISKPAAWELSRGESPTVLYATVLSLSDCEKLQK 766
Query: 719 SQYPVRL 725
S +P+ L
Sbjct: 767 SYHPIVL 773
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 217/476 (45%), Gaps = 75/476 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ--LKIIGFSKDIGSSLSL 988
QP+LR++ + RN L +++++ +Y+ +C LKI S + + + +
Sbjct: 954 QPVLRSELIQLRRNFL---DIDENQKSPPVDYY------VCAEALKISAISVPLATQIFV 1004
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQE------RF--- 1037
P+++ R+E+ L+A+E L P E+ L+ALT +E +E RF
Sbjct: 1005 FPAMIWRMESYLIALEACEKLQLKIP------PELALEALTKDSENTEEHGMEQIRFQSG 1058
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ ERLE LGD FLK A LF ++ DE + +R + N NL A +
Sbjct: 1059 MGKNYERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFK 1118
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR + F ++ G + + P+ H L KT
Sbjct: 1119 FIRSRSFSRRAWYPEGLTL-----------LKGKDKKEGPNG---------PEHALADKT 1158
Query: 1155 IADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
IADV EAL+GA + D KA T F+ +VE A + +
Sbjct: 1159 IADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRLYSLPNYQTASA 1218
Query: 1207 SAS-LDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLIT 1261
SAS +D+A ++ LG+ F + LL AF+HPS+ CYQRLEFLGD++LD +
Sbjct: 1219 SASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDSLLDMVCV 1278
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++L+ YP P LT+ + +V+N+ ++AV + + LI SN L I +Y + +
Sbjct: 1279 NHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQITSYTEELQ 1338
Query: 1322 TPSSTRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
E E P+C L D+VE+ LGAI +DS FN + V F+
Sbjct: 1339 AMKIKMEGNLEAWTYTNEPPKC---LPDIVEAYLGAIFVDSNFNFDVVDDFFRKFI 1391
>gi|451996502|gb|EMD88969.1| hypothetical protein COCHEDRAFT_1143131 [Cochliobolus
heterostrophus C5]
Length = 1426
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 192/669 (28%), Positives = 314/669 (46%), Gaps = 88/669 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL---IRKPQKSICIFLAPTVA 116
R YQ E+ ++M+ NIIV + TG GKTHIA+ E A + KP K + FLAPTVA
Sbjct: 28 RGYQAEMIAESMKANIIVVMDTGSGKTHIAI----ERARAELEMCKPDK-LVWFLAPTVA 82
Query: 117 LVQQQAKVIEESI-GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIP--QILLYCLYHR 173
L +QQ +V + ++ G+ CG L + + Q+ V ++I QILL L H
Sbjct: 83 LCEQQYEVFQANLPGYGHLLLCGRDVELWTTQSVWNNVFQHNVRIVISTHQILLDALTHG 142
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKG 229
F+ ++ +ALLIFDE HH +K HP KIM DFY P + +P++ G++ASPV+
Sbjct: 143 FMSLQRLALLIFDEAHHCTLK--HPAHKIMSDFYTPQLTDSTFALPKVLGLSASPVMRAA 200
Query: 230 ASAQANLPKSINSLENLLDAKVYS--VEDAEDLESFVSSPVVRV-YQYGPVINDTSSSYV 286
A+ Q + ++E L A V + + +E L S +++V Y P S
Sbjct: 201 ANKQG-----LEAIERNLQATVRTPKLYRSELLRSVHRPELIQVNYTRDPSTGSPSVLLF 255
Query: 287 TCSEQLA--EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK-FCLENLGVCGALHA 343
++ + Y+ +L L ++ N ++QL +L DS K +C + L
Sbjct: 256 ALKNACVNYDLMDDPYVISL---LEQQRNGYNVSRQLQKLWDSRKTYCYDQLKQ------ 306
Query: 344 SYILLSGDETMRNEL------------IEAEGNTIDDSLCRFASQAS----EVFAAICRR 387
L+S E M EL + N + D C ++ ++F + R
Sbjct: 307 ---LVSKAEAMAQELGNSAMEHYVYKCVNDFKNLVHDQSCDLSTDEKRHLLKIFQHLPTR 363
Query: 388 DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRL-QQHMKCIVFVNRIVTARALSYIL-Q 445
+E L S K+ LI I+ + + IVFV + V +L+ IL
Sbjct: 364 HTTGISSPILESL-----SHKVNVLIDIIVAEAVTNSNFTSIVFVEQRVWVASLAEILTS 418
Query: 446 NLKFLASWRCHFLVGVNAGLKSMSR-------NAMKSILEKFRSGELNLLVATKVGEEGL 498
+ + A R VG++ + S +++L+ F++G +NL++AT V EEG+
Sbjct: 419 HPRTKALLRVGTFVGMSQSSQHKSSVFNYADPKNQQTVLDDFKAGIINLVLATSVLEEGI 478
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV-DSGNQRELDLIKNFSKEEDRM 557
DI +C LV+ F+ P+T+ F+Q RGRAR +S Y LV D G+ ++ E +M
Sbjct: 479 DIPSCHLVVCFEAPKTLKGFVQRRGRARQQRSRYYILVPDMGDVYS---ATSWQYLEAQM 535
Query: 558 NREIMDRTSSDAFTCSEE-------RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN 610
+ D A EE R +++++GA ++ + L+ +C++L + +
Sbjct: 536 KKAYEDHERQTALRSEEECIEEYDSRCLRIETTGALLTLDNAMQHLYHFCARLSSGTYVD 595
Query: 611 PKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSM-----EAAKKDACLKAIEDLHKL 665
+P+F + + G LP + + V T SS A+KDA +A + L+
Sbjct: 596 ARPEFDFTNINGQISAKASLPISVDL--TVRTANSSRTWKTERMAQKDAAFEAYKTLYFA 653
Query: 666 GALNDYLLP 674
G +N+ LLP
Sbjct: 654 GLVNENLLP 662
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 184/407 (45%), Gaps = 71/407 (17%)
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEIL 1045
SL PSI H+LE +VA L+ + S +VS +LL ALT + + +RLE L
Sbjct: 921 SLFPSITHKLETYMVANTLRTTILQSV--DIDVSHLPILLLALTPSATEGEENYQRLEFL 978
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD LK+ HL H + EG LT ++ V+N L + A L +I + F +
Sbjct: 979 GDCILKFITSLHLMATHLRMPEGMLTGKKGKLVSNGYLARAALAKGLDGFILYKRFTGAK 1038
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ PR S+ T R+ K IADV+E+L+GA
Sbjct: 1039 W------KPRYVSQMLSITNPPTKQERS------------------SKLIADVIESLIGA 1074
Query: 1166 FIDDSGFKAATAFLK-WIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQF 1223
GF A A +K + ++ Q + ++ P S+ A T+E L+GH F
Sbjct: 1075 SYVVGGFSKAFACVKALLPLENWMPIPQANDTLYNAA---PEQDSVVGAITVENLVGHAF 1131
Query: 1224 LHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
++ LLL+A HP+F L Y+R EFLGDAVLDY+++ LYS P+L ++ +R+
Sbjct: 1132 NNKALLLEALTHPTFRGLNTFCSYEREEFLGDAVLDYIVSKRLYSHRPELPHYKMHGIRT 1191
Query: 1282 MLVN-------------NQAFANV------AVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
+VN + F N A ++ ++FL F S+ L + N +
Sbjct: 1192 AMVNASFLAYSMFETTVEEVFTNKETLQPEAHQKALWQFLRFTSHELVTSRNLAIQRH-- 1249
Query: 1323 PSSTR-EVKEGPR--------------CPKVLGDLVESSLGAILLDS 1354
S R ++ E + PK L D+VES +GA+ +DS
Sbjct: 1250 -SEARIQIAEALQHDARFPWHALSLTDPPKFLSDIVESMIGALYIDS 1295
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 1225 HRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
H +LL A PS YQRLEFLGD +L ++ + +L + + ++ G LT + LV
Sbjct: 953 HLPILLLALT-PSATEGEENYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKGKLV 1011
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVE 1344
+N A A+ + F+++ ++ YV M++ ++ +E R K++ D++E
Sbjct: 1012 SNGYLARAALAKGLDGFILYKRFTGAKWKPRYVSQMLSITNPPTKQE--RSSKLIADVIE 1069
Query: 1345 SSLGAILLDSGFN 1357
S +GA + GF+
Sbjct: 1070 SLIGASYVVGGFS 1082
>gi|396464039|ref|XP_003836630.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
gi|312213183|emb|CBX93265.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
Length = 1393
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 189/689 (27%), Positives = 309/689 (44%), Gaps = 108/689 (15%)
Query: 40 FGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL 99
F ++++ + +D +P ++ R YQ E+ ++++++NIIV
Sbjct: 3 FMNDTAIVVETSDGEPFRL-RSYQTEMVEESLQQNIIV---------------------- 39
Query: 100 IRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQY 156
+ FLAP+V L +QQ +V + ++ G+ ++ G G W+ +
Sbjct: 40 -------VVWFLAPSVTLCEQQYEVFKYNLPGYGIQVLSGKDGVDHWTDQGTWDAVLHNV 92
Query: 157 EVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP------D 210
+++ Q+LL L H F++M +ALLIFDE H+ + NHP +IM DFYKP
Sbjct: 93 RIVLSTHQVLLDALTHAFVRMSKLALLIFDEAHNCTL--NHPARRIMSDFYKPFADAADP 150
Query: 211 IMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA-----KVYSVEDAEDLESFVS 265
VP+I G++ASPV+ A+ +A + +E L A K+Y E L FV
Sbjct: 151 KSPVPKILGLSASPVMKAAATKEA-----LEQIERNLRAIARTPKIYRSE----LMRFVH 201
Query: 266 SPVVRVYQYGPVINDTSSSYVTCSEQ----LAEIKREQYISALSRKLHDHQSLRNTTKQL 321
P V Y P SS + S Q EIK + Y+ L +K D +R KQL
Sbjct: 202 KPEVLQVSYPPPSPSDVSSPLLLSLQHILVTYEIKSDPYMLELLQKQQDGDEVR---KQL 258
Query: 322 NRLHDSMK-FCLENLGVCGALHASYILLSGDETMRNELIEAEGN---TID--------DS 369
+L S K +C E + + G M L ++ G +D D+
Sbjct: 259 EKLFVSRKTYCYEQIRTLASKAFDMTHEFGVSAMEWYLQQSMGQLREVVDMTSHQQLFDT 318
Query: 370 LCRFASQASEVFAAI-CRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ-HMKC 427
R + ++ RD I S +S ++ S K+ LI +L + ++
Sbjct: 319 AAREKQHLMRILESLPLPRDTIGSSISPSKL------SHKVEMLIDLLVSELMENPDFFG 372
Query: 428 IVFVNRIVTARALSYILQNLKFLAS-WRCHFLVG--------VNAGLKSMSRNAMKSILE 478
+VFV + V AL+ IL S +R VG N + SRN + L+
Sbjct: 373 LVFVEQRVFVAALAQILATHPQTQSLFRVGTFVGESQSPKRKTNIANLAESRN-QGATLD 431
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
FR+G NL++AT V EEG+DI +C LV+ F+ P+ + SF+Q RGRAR +S+Y
Sbjct: 432 DFRAGRTNLMLATSVLEEGIDISSCNLVVDFERPKNLKSFVQRRGRARKQRSKYFIFTPQ 491
Query: 539 G---------NQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISA 589
G E D+ + + ED + M + R +++ S+GA ++
Sbjct: 492 GPGSRSSEYWQSLEADMRRAY---EDELRIVKMANEREKVEEEEDGREFRIQSTGALLTL 548
Query: 590 GYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG-TICHIILPANA-PIHQIVGTPQS-- 645
L+ +C+ F + +P+F + D L G I ++LP P + + +S
Sbjct: 549 DNACQHLYHFCAVSATGSFVDSRPQFKFTDVLTGQIISEVLLPICIDPSVRKANSLKSWR 608
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ + A+KDA +A L++ G +ND LLP
Sbjct: 609 TEKMARKDAAFEAYTALYRAGLVNDNLLP 637
Score = 110 bits (275), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 177/410 (43%), Gaps = 79/410 (19%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEV-SAEMLLKALTTEKCQERFSLERLEILG 1046
L PSI+H+ E L+A +L+ L + P ++ +L+KALT+ E ++LE G
Sbjct: 891 LFPSILHKFECDLIADQLRTSLLS--PVAFQLLDLPLLVKALTSSSTGEVEDYQQLEFYG 948
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D LK+ HL + E LT+++ N V+N +L + + L Y+ + F ++
Sbjct: 949 DCILKFISSLHLMAANPKEPESFLTQKKGNIVSNGSLTRASLSAGLDRYVITKRFTGAKW 1008
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR+ + T P+ + L K IADVVE+++GA
Sbjct: 1009 ------QPRLLVETVTVT-------SPPNKVK-----------LSSKLIADVVESIIGAS 1044
Query: 1167 IDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
GF A A ++ WI I NI P L +TLE L+
Sbjct: 1045 FVVGGFPKAFACIQTLLPLENWISI------PDANNILYDFAQEGPTFTGL--STLERLI 1096
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLGG---C-YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ 1275
GH F + LLL A H S+ LG C YQR EFLGDAVLD++IT LY+ P L+
Sbjct: 1097 GHTFSKKFLLLDAITHASY--LGPNVHCDYQRTEFLGDAVLDFIITKRLYAHTPPLEHQT 1154
Query: 1276 LTDLRSMLVNNQAFA----NVAVDQSFYKFLIFDSNVLSETINNYVDYMITP-SSTREV- 1329
+ +R+ +VN A +D+ ++V S + ++ ++ RE+
Sbjct: 1155 MHAIRTAMVNASFLAFRMFETTIDEHLTNKATLQTDVQSRALWQFLRSGAPQVNAAREIA 1214
Query: 1330 -KEGPRC------------------------PKVLGDLVESSLGAILLDS 1354
K+ PK L D+VES LGAI +DS
Sbjct: 1215 FKQHQEARGQILVALERDARYPWHLLALTDPPKFLSDIVESVLGAIYIDS 1264
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 1219 LGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ Q L LL++A S + YQ+LEF GD +L ++ + +L + PK LT
Sbjct: 916 VAFQLLDLPLLVKALTSSSTGEVED-YQQLEFYGDCILKFISSLHLMAANPKEPESFLTQ 974
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLI--------FDSNVLSETINNYVDYMITPSSTREVK 1330
+ +V+N + ++ +++I + +L ET+ + +P + ++
Sbjct: 975 KKGNIVSNGSLTRASLSAGLDRYVITKRFTGAKWQPRLLVETVT-----VTSPPNKVKLS 1029
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGF 1356
K++ D+VES +GA + GF
Sbjct: 1030 S-----KLIADVVESIIGASFVVGGF 1050
>gi|320035561|gb|EFW17502.1| RNA helicase/RNAse III [Coccidioides posadasii str. Silveira]
Length = 1448
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 176/658 (26%), Positives = 305/658 (46%), Gaps = 62/658 (9%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + AR YQLE+ +++ +NIIV + TG GKT IA+L I L R P F+APT
Sbjct: 43 PPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQR--ELERCPAHKFVWFMAPT 100
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VALV+QQ I + + F+ R G + + W+ + +++ PQ+LL L
Sbjct: 101 VALVEQQHSAISKQLPAFQTRLLTGAANVNHWSTKKIWDDILLNIRIVISTPQVLLDALS 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKVPRIFGMTASPVV 226
+ F+ + I+LL+FDE HH + P +IM+DFY + +P I G+TASP
Sbjct: 161 NGFVDLHTISLLVFDEAHHC--VRDAPANRIMRDFYHYHRQEEGTDGLPHILGLTASPTT 218
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L ++N++ + K++ E++ F+ P +Y P + + SS
Sbjct: 219 RARQTDLEVLEINLNAV--CVTPKMHR----EEMMQFIHMPEYCSIEYQPDVQNFSSIVE 272
Query: 287 TCSEQLAE--IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC----GA 340
S + E I+ + ++ + R+ L++ + L+ + CL+ L C
Sbjct: 273 KLSVIINELDIENDPFVKFMRRR----NDLKSRQRLLDAFENKKTPCLDQLKRCLRRSRV 328
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV- 399
+H + + + ++ + + S ++A E + + + ++ +S E+
Sbjct: 329 IHRELGPWASERFLTRCIMGLKSKQTNASGPQWADWDREDNSYML--NVLSQVVSSTEMG 386
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKFLASWRCH 456
++ P +L R + L F + +H+ IVF L+ +L +
Sbjct: 387 VQNP--PDELSRKVHKLIDFLVLEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIKTT 444
Query: 457 FLVGVNAGLKSMSRNA----------MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
+G +A S+SR + + ++ R+G+ +L++AT V EEG+D+ C LV
Sbjct: 445 AFLGSSA---SVSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLV 501
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNREIMD 563
I FDLP+ + SFIQ RGRAR S++A + D EL L++ K+ N+ ++
Sbjct: 502 ICFDLPKDLRSFIQRRGRARKKGSKFALFLHSEDRATSSELHLMEKTMKQLYLENKRTLE 561
Query: 564 RTSSDAFTCSEERIY---KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY-FD 619
EE Y +V S+GA ++ + L +C L EF P+F D
Sbjct: 562 HIQ--YLENVEEEGYDGFRVASTGAFLTLSNARNHLSHFCGTLS-AEFIATDPEFVLEGD 618
Query: 620 DLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLLP 674
D G +ILP+ + + + G E AK+DA +A L++ G +NDYL+P
Sbjct: 619 DTTGFSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 141/328 (42%), Gaps = 39/328 (11%)
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
D LP E Q + +P ++H +EN +A EL + P G + +
Sbjct: 930 DRLPVEYSQFAL------------FIPCLIHSIENYFIANELAQTIL--HPVGFS-NLSL 974
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L A+++ +E + +RLE LGD+ LK L H EG LT R+ N V+N L
Sbjct: 975 VLTAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYL 1034
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
A + L +I +PF ++ Y+ D +N
Sbjct: 1035 ANAALQTGLDKFILTKPFTGAKW-------------------RPSYNT---DHINTG-NM 1071
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKS 1202
++ + K +ADVVEAL+GA D G LK +++ ++ NI +
Sbjct: 1072 TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQQD 1131
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+ ++ +E L+G+ F + LLL A HPS G YQRLEF+GD++LD ++
Sbjct: 1132 SFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSSKGSGHSYQRLEFVGDSILDIIVVQ 1191
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
L+ + +R+ LVN A
Sbjct: 1192 ELFESPRGFHHFDMHLMRTALVNADFLA 1219
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F + L+L A + S R YQRLEFLGD++L + L + +P G+LT +
Sbjct: 969 FSNLSLVLTA-ISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGN 1027
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-VDYMITPSSTREVKEGPRCPKVLGD 1341
+V+N AN A+ KF++ ++ +Y D++ T + T +E KVL D
Sbjct: 1028 VVSNGYLANAALQTGLDKFILTKPFTGAKWRPSYNTDHINTGNMTEPTRE--MSTKVLAD 1085
Query: 1342 LVESSLGAILLDSGFNLNTVWKIM--LSFLDPILKFSNLQ 1379
+VE+ +GA +D G N KI+ L P +K+S L
Sbjct: 1086 VVEALIGAANIDGGEN-----KILNCLKIFIPDIKWSPLN 1120
>gi|195997771|ref|XP_002108754.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
gi|190589530|gb|EDV29552.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
Length = 1018
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 247/517 (47%), Gaps = 68/517 (13%)
Query: 928 HPKQP--------LLRAKPLFRLRNLLHNRKLEDSESHELEEY--------------FDD 965
HPK+ +++A P ++ N+ SH+L E +
Sbjct: 505 HPKEKQDLYLYALVMKALPPYKAVNIFDKVNFGIILSHKLPEVSMIYRNTQSETSSKITE 564
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFP-EGAEVSAEM- 1023
L PELC+ + S + ++ +PS + R+E LL+A ELK +L S P G +S
Sbjct: 565 LIPELCKRYFL--SASVWKVITCIPSFLWRMETLLLAHELKDVLFGSIPINGISISKNQT 622
Query: 1024 ----LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
LL+ALT + ++ SLERLE LGD+FLK+ + +LF+ H EG+LT + V
Sbjct: 623 FTLKLLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVR 682
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQ---FFALGRRCPRICSKETERTIHSQYDGRAPDD 1136
N NLLKL + YI +PF+ + + G + K + + S DG
Sbjct: 683 NDNLLKLGKSTPICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDK--- 739
Query: 1137 LNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVT 1194
+ H K+IADV++A++ A + + + A F+ W+ ++F AS +
Sbjct: 740 -------AVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAAS 792
Query: 1195 ----NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCY---QR 1247
+ ISS + + ++ LE ++G+ F ++ +++A H S++ Q+
Sbjct: 793 LLPDDDNISSNEINKIYETNNLERLEKVIGYSFQNKLFMIRALTHSSYHHHDIAIESNQK 852
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGD +L Y+I + ++ +P KP +L D + +VNN+ A + + K++ +S
Sbjct: 853 LEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQESP 912
Query: 1308 VLSETINNYV-----DYMI---------TPSSTREVKEGPRCPKVLGDLVESSLGAILLD 1353
L I+ + DYMI T + E + PK + D+VE+ +GAI +D
Sbjct: 913 DLFRDIDQFAKIITCDYMIDDEMNYNDRTEALFENFTEEVKIPKPVSDVVEALIGAIYID 972
Query: 1354 SGFNLNTVWKIMLSFLDP--ILKFSNLQLNPIRELLE 1388
+G ++ V K ++ L P L ++ ++PIR+L E
Sbjct: 973 TGESIAEVTKALMPLLQPRISLVLRDIPISPIRQLYE 1009
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKS---ICIFLAPTV 115
R YQ EL + A+ N I+ L TG GKT IAV+LI +L H ++ KP FL TV
Sbjct: 20 RAYQSELLEAALRSNAIICLNTGSGKTFIAVMLIKKLQHEILPKPLDQGGKKTFFLVNTV 79
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ+ V+ + FKV + G L + W E+D +VLVM IL L H +I
Sbjct: 80 PLARQQSDVLRKETPFKVGDYVGDDVDLWNKTKWVYELDSQQVLVMTADILAQILQHGYI 139
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
K+ I LLIFDECHHA NH Y +IM+D+ + PRIFGMTAS GK Q
Sbjct: 140 KVSQINLLIFDECHHAV--GNHTYVQIMRDYVYKEQKSKPRIFGMTASVFHGKCRIGQ-- 195
Query: 236 LPKSINSLENLLDAKVYSVEDAEDL 260
+ I SLE +L ++V + +DL
Sbjct: 196 IENKIRSLEAILLSRVVTTSYRQDL 220
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 58/269 (21%)
Query: 427 CIVFVNRIVTARALSYILQNL----KFLASWRCHFLVG----VNAGL--KSMSRNAMKSI 476
I+F + A ALS IL + + + F+VG V++ L +MS N
Sbjct: 253 AIIFTEKRCVAYALSSILDKVAEHDNAFSCIKSDFVVGHGTRVSSSLVATNMSHNQQTRA 312
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
+ KFR ++N+LVAT V EEG+D+ C LV+RFD +T S++Q++GRAR + Y LV
Sbjct: 313 INKFRRQDVNILVATNVLEEGIDVPKCNLVVRFDEIKTFGSYLQAKGRARAQHAHYIILV 372
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI----------YKVDSSGAC 586
+ + D FS + R + D+ A E+ + Y+V+S+GA
Sbjct: 373 EK--DKIADARDQFSTWS-YLERYLQDQCQCRAVGTEEDYLADDSLNLVPPYEVESTGAK 429
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
++ I LP+++P+ + P +
Sbjct: 430 VTMSNTT----------------------------------IQLPSSSPLPDSITGPLAI 455
Query: 647 MEA-AKKDACLKAIEDLHKLGALNDYLLP 674
E AK L ++LH++G L+D L+P
Sbjct: 456 TEKRAKASTALLVCQELHEIGQLDDNLVP 484
>gi|389635425|ref|XP_003715365.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|374095503|sp|A4RHU9.3|DCL2_MAGO7 RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|351647698|gb|EHA55558.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|440467937|gb|ELQ37130.1| hypothetical protein OOU_Y34scaffold00618g20 [Magnaporthe oryzae
Y34]
gi|440483523|gb|ELQ63906.1| hypothetical protein OOW_P131scaffold00922g30 [Magnaporthe oryzae
P131]
Length = 1485
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 204/689 (29%), Positives = 304/689 (44%), Gaps = 101/689 (14%)
Query: 49 QKTDKDPKQI-ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI 107
Q + P+ I AR YQLE+ + +M++NIIV + TG GKT +AVL I A L R P +
Sbjct: 54 QPSGNGPRSIIARAYQLEMFQASMQQNIIVSMDTGSGKTQVAVLRIR--AELERTPPEKR 111
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQ 164
FLAPTVAL QQ +VI I G + S D W+ + V+V
Sbjct: 112 VWFLAPTVALCAQQYEVIRSQIKVANSIVMTGDDNVDSWSDVQTWDAVLANVRVVVCTYM 171
Query: 165 ILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMT 221
IL L H F+ M+ I+LL+ DE H+ K P IMK FY P VP I G+T
Sbjct: 172 ILFEALSHAFVTMDSISLLVMDEAHNCTGK--FPGRLIMKRFYMPRKSAGDHVPHILGLT 229
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY------G 275
ASPV+ S+ +L S++S+ + +++ E+L + V P + V Y
Sbjct: 230 ASPVMKSDLSSMEDLESSLDSV-----CRGPTLQ-REELFANVHQPTMTVTTYKECDLRS 283
Query: 276 PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLR--------------NTTKQL 321
PV + + + + + +I + Y+ L + +SLR N K L
Sbjct: 284 PVQYTRNMNNLHLAFENLDIAEDPYVLHLMGQ-RTPKSLRELDRILTKLDTYTQNQMKAL 342
Query: 322 NRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVF 381
R S+ L V ++ +S + + L G +DD R+ +A +
Sbjct: 343 QRKSSSLFRELGQWAVDSYIYNVVEKVSNLDARSSWL----GGWLDDE-QRYLHRAIQGI 397
Query: 382 AAICRRDGI-ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
A+ I A +++ I KL L+ IL + + IVFV TA L
Sbjct: 398 NALPVSAAIPAPEMTSI----------KLQVLLRILRGY--EGSPVGIVFVKERATAGIL 445
Query: 441 SYILQNLKFLASWRCHFLVGVNAGL-KSMSR--NAMKSI--------LEKFRSGELNLLV 489
S Q L + + VG G + MSR N + + LEKFRSG +NLLV
Sbjct: 446 S---QLLAIIPDINARYKVGCMVGTSRYMSRKMNIHEVLQQGDDLLALEKFRSGAINLLV 502
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD------------ 537
AT V EEG+D+ C LVI FD+P + SFIQ RGRARM +S+ +++
Sbjct: 503 ATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRGRARMRESKLHLMIEEDSLVSVKDWGA 562
Query: 538 ---------SGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACIS 588
+ RELD + +E++ + RT++ T + + +
Sbjct: 563 LEAAMKQRYENDMRELDHLAQVEEEDEMDVPPLHSRTTAAKVTVDDAKGHLEHFCRVVTR 622
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAP--IHQIVGTPQS- 645
+ V Y F KP LG T ++LPA+ P + Q +
Sbjct: 623 SQQYVDASPEYLVTTKTTAFVGGKP----IPILGVT---VLLPASLPPNLRQAHSSRDWI 675
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
S AKKDA L+A + L++ G +N++LLP
Sbjct: 676 SERNAKKDAALQAYKMLYEAGLINEHLLP 704
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 148/346 (42%), Gaps = 63/346 (18%)
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
FD +P L QL + L+PSI +E VA EL + + ++ +
Sbjct: 961 FDTVPATLVQLGM------------LVPSITQAMEPYFVAQELLRRTALGSLDFKDI--D 1006
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+++ +T+ + ER+E LGDA LK + EG L+ + V+NS
Sbjct: 1007 LVMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDRLVSNSR 1066
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L K A L +I I QY + ++
Sbjct: 1067 LCKAATALGLDQFI----------------------------ITRQYSLKQWRNMLTAPE 1098
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
+ KT+ADV EAL+GA + G A L+ I + + E + + S++
Sbjct: 1099 PPTNTRKMSSKTLADVTEALIGAAYIEGGMSKA---LRCISLMIPNERWRSLD---ESRA 1152
Query: 1203 FL--------PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN---RLGGCYQRLEFL 1251
L PL ++L LE LLG+ F + LL++A H S+N G +RLEFL
Sbjct: 1153 VLYQVALNDIPLPSTL--GPLEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFL 1210
Query: 1252 GDAVLDYLITSYLYSVY--PKLKPGQLTDLRSMLVNNQAFANVAVD 1295
GD+VLD+++ + L+SV ++ + LR+ +VN + +A++
Sbjct: 1211 GDSVLDFVVVARLFSVKDPAPIEHYNMHLLRTAVVNGEFLGFLAME 1256
Score = 41.2 bits (95), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
L++ S RL Y+R+EFLGDAVL + G L+ L+ LV+N
Sbjct: 1007 LVMMVITSSSAGRLTN-YERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDRLVSNS 1065
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT----PSSTREVKEGPRCPKVLGDLV 1343
A +F+I L + N M+T P++TR++ K L D+
Sbjct: 1066 RLCKAATALGLDQFIITRQYSLKQWRN-----MLTAPEPPTNTRKMSS-----KTLADVT 1115
Query: 1344 ESSLGAILLDSGFN 1357
E+ +GA ++ G +
Sbjct: 1116 EALIGAAYIEGGMS 1129
>gi|225684610|gb|EEH22894.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1415
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 215/809 (26%), Positives = 358/809 (44%), Gaps = 105/809 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQLE+ + +++ENII+ + TG GKT IA+L I +EL + + FL PTVAL
Sbjct: 31 RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCT---EDKLVWFLTPTVALA 87
Query: 119 QQQAKVIEESIG-FKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ K I + + ++ R G K + W+ + +++V PQILL L H FI
Sbjct: 88 DQQHKNISQQLSVYQTRLLLGTDKVHYWSTKKIWDDVLLNIKIVVSTPQILLDALSHGFI 147
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASPVVGKG 229
M I+LL+FDE HH S P IM+ FY + + +P I G+TASPV
Sbjct: 148 TMSRISLLVFDEAHHCDGFS--PANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVTRAD 205
Query: 230 ASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
P+S+ +E L+A+ + E+L +V P + ++ +I+ +
Sbjct: 206 -------PESLKRVEKNLNARCETPRIHREELMRYVHRPELYTVKFRTDSLIHSDMLQNL 258
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG----VCGALH 342
+ +I+++ +I L R+ + R+ K L L CL L +H
Sbjct: 259 SRIVGTVDIEKDPWIKRLRRQ----EDRRSQEKLLYALEKRKTHCLSQLSKLLRQAINVH 314
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD-----GIASDLSCI 397
+ D + +E+IE R Q E+ +++ R + + S+LS I
Sbjct: 315 DDLGPWAADAFI-SEVIERLETK------RTMYQHVELHSSLDREEEAFIFELLSELS-I 366
Query: 398 EVLKEPFFSKKLL--RLIGILSTFRLQQH---MKCIVFVNRIVTARALSYILQN---LK- 448
+K+ + SK + + +L +H I+F + T LS+++ LK
Sbjct: 367 SPVKQDWDSKSNIVSTKVNLLVELLESEHTADFTGIIFAQQRATVTMLSHLISKHPRLKD 426
Query: 449 ------FLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
FL C + + + + K ++ RSG+ NLL+AT V EEG+D+
Sbjct: 427 IIVTGAFLGD-AC-YASRTSTITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEGIDVSA 484
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN---- 558
C LV+ FD + + SFIQ RGRAR +S++ +DS E K +++ E+ M
Sbjct: 485 CHLVVCFDAIKNLRSFIQRRGRARKERSKFVMFLDSDKISEE---KQWTRLEEVMRSIYE 541
Query: 559 ---REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF 615
R + D + + ++ +++S+GA ++ L +C+ L H F + +P F
Sbjct: 542 DDMRRLEDVMARENIVEEGDQYLRIESTGALLTLENARQHLEHFCATL-HYAFTDSRPHF 600
Query: 616 YYFDDLG-GTI-CHIILPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALND 670
+ + G GTI ++LP + I G+ + E A++DA +A L+ G +ND
Sbjct: 601 IFDESEGDGTIAAKVVLPNVLDPKFRVIYGSKRWKTERMAQRDASFQAYLKLYNEGLVND 660
Query: 671 YLLPQEDNATEDEPMLF----------SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ 720
YLLP ED + + S D + SR E + ++ S
Sbjct: 661 YLLPVHWRGDEDPKLEYCEQRPSVVKISRHFDPWSTIASRWETTQKFYQTLIEISSDSIP 720
Query: 721 YPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGI 780
+P + +P P D F +F E+ ++HL + S +T +
Sbjct: 721 FP---QMRLVLPVPLPCD---ISFNIFWN-------ENNTFEVHLKQESSSITASLIKHA 767
Query: 781 MQAQQ--FQEMFL-KVILDRSEFNSEFVP 806
QA F MF K+ DR +F+ F+P
Sbjct: 768 AQATHAIFSSMFSHKMPSDRFDFSCLFLP 796
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 186/457 (40%), Gaps = 90/457 (19%)
Query: 988 LLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L PSI+H++E L+A EL K +LS P G +++ AL +E + +R+E LG
Sbjct: 930 LCPSIIHKVETFLIAEELNKTILS---PVGF-TDLNLVITALCAPDAREATNYQRIEFLG 985
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK+ L + EG L+ + V+N L A L +I F ++
Sbjct: 986 DSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETGLDKFIFMDIFTGVKW 1045
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR E + + + KT+ADV+EAL+GA
Sbjct: 1046 ------RPRYNKAHVEEQDIPRRE-------------------MSTKTLADVIEALLGAA 1080
Query: 1167 IDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
D G LK W+ F+A + N LP S D +E L+
Sbjct: 1081 TIDGGRTKVEKCLKIFLPEIRWMPFADRFDA--LYNSVPEVYENLPSSWFRD---IESLV 1135
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
G+ F + L QAF HPS YQRLEFLGD++LD++I ++++ + + +
Sbjct: 1136 GYIFNKKVFLAQAFTHPSNPGSTMSYQRLEFLGDSILDHIIVDHIFNSPRNFQHVDMHLM 1195
Query: 1280 RSMLVN-------------------------NQAFANVAVDQ-SFYKFLIFDSNV----- 1308
R+ L N N F + + S ++++ ++
Sbjct: 1196 RASLANADFLAFLCIGMTTEEERGEIVEASRNGTFTRMTTRKISLWQYMRHGTSWELTVS 1255
Query: 1309 LSETINNYVDYMITPSSTREVKEGP----------RCPKVLGDLVESSLGAILLDSGFNL 1358
+T+N Y + T+ + E R K DL+ES LGAI +DS +L
Sbjct: 1256 QQQTVNQY--QALKADITKALYESDTYPWALLSRLRAQKFFSDLIESVLGAIFIDSHGSL 1313
Query: 1359 NTVWKI-----MLSFLDPILKFSNLQLNPIRELLELC 1390
+ +++FL IL+ ++P + L E+
Sbjct: 1314 DACAAFLERIGLMNFLRRILQDEIDIMHPKQRLGEMV 1350
>gi|242018047|ref|XP_002429494.1| dicer-1, putative [Pediculus humanus corporis]
gi|212514432|gb|EEB16756.1| dicer-1, putative [Pediculus humanus corporis]
Length = 2179
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 211/472 (44%), Gaps = 104/472 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +++ V EG+L+ RS V+
Sbjct: 1638 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRSKQVS 1697
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFALGRRCPR----------------- 1115
N NL +L + L V + +P D PC + + R R
Sbjct: 1698 NFNLYRLGRKKMLGESMVATKFEPHDNWLPPC--YYVPRELERALIEAGVPASHWNRADL 1755
Query: 1116 ----------ICSKETERTIHSQYDGRAPDDLNAEVRCSK-------------GHHWLHK 1152
IC E+ +N + C H +
Sbjct: 1756 PSLKNLSKEEICQLVKEKGEKLGIVNAEKKPINVTIPCLNLENMPCFIPYNLMTQHSIPD 1815
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE------FEASQVTNICISSKSFLPL 1206
K+IAD VEAL+GA++ G + A F+ W+GI+V FE+ +I + P+
Sbjct: 1816 KSIADCVEALIGAYLVACGPRGALLFMSWLGIKVLPKEEKFFESENDPDIKKGVGASRPI 1875
Query: 1207 SASLDMAT-----------------------LEILL----------GHQFLHRGLLLQAF 1233
+ LE LL ++F R LLQA
Sbjct: 1876 KVMTNNGEVTFGKLKSPKRPLICHIPNPEGELEKLLRGFDIFEESIKYRFRDRSYLLQAL 1935
Query: 1234 VHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S+ NRL CYQRLEFLGDAVLDYLIT +LY PG LTDLRS LVNN FA+
Sbjct: 1936 THASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRHHSPGALTDLRSALVNNTIFAS 1995
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYM------------ITPSSTREVKEGPRCPKVL 1339
+AV F+K+ L+E ++ +V + + E E PK L
Sbjct: 1996 LAVRHDFHKYFRHLCPSLNEVVDRFVRFQQANGHAISEEFYLIEEEECEEAEDVEVPKAL 2055
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRELLEL 1389
GD+ ES GAI LDSG +L+ VW++ + ++ +N+ +PIREL EL
Sbjct: 2056 GDVFESVAGAIFLDSGMSLDAVWRVYYRIMKNEIELFSTNVPKSPIRELFEL 2107
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 159/672 (23%), Positives = 265/672 (39%), Gaps = 108/672 (16%)
Query: 428 IVFVNRIVTARALSYILQNLKF----LASWRCHFLVG-VNAGLKS-----MSRNAMKSIL 477
++FV + TA+ L ++L +LK + F VG V G K + +L
Sbjct: 595 LIFVEKKFTAKVLFHVLNDLKQADEDFSFLNVQFTVGKVVDGTKDPKGAENEHRKQELML 654
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
++FR NLL+ T EEG+++ C LVIRFD+P+ S+I ++ RAR S + LV
Sbjct: 655 KRFRIRACNLLIGTSFLEEGIELPKCNLVIRFDVPKHYRSYINTKERARAANSLFCLLV- 713
Query: 538 SGNQRELDLIKNFSK--EEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC--------- 586
G + D + +K E + + E + +E +Y C
Sbjct: 714 -GPNEKDDFVHELAKYYETEAVLLEKCGHLEPEEEEENEADLYTQLVQPFCPLLKRECPH 772
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKP----KFYYFDDLGGTICHIILPANAPIHQ-IVG 641
+ V LL+RYC+KLP D F P K + +C I LP N+PI Q I G
Sbjct: 773 VDLSSAVMLLNRYCAKLPSDTFTRLTPICNIKTVKEFERKMYVCTIRLPINSPIKQEIEG 832
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLFSSDSDSYE---- 695
P + AK+ A + + LH G L+D L P +E +E L ++ ++ E
Sbjct: 833 CPMPTRVLAKRFAAFQCCQLLHLSGELDDTLQPISKESFWIREEGRLTVTNDETEEIVSR 892
Query: 696 -------GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD---------- 735
G R + + + L + P L M +P+
Sbjct: 893 DSLEPRPGTTKRRQYYYKKIADSLTDCLPMADKPSFLYDISMVLSCPLPEEQNTRGRKIH 952
Query: 736 PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQ 787
P + + FG+ K +P + ++V L LA+ +T++ + I+ F
Sbjct: 953 PPENSSQGFGILTKKRIPKIGPFPIFTRSGEVQVKLKLAQTTVQLTEIEINKIV---AFI 1009
Query: 788 EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLS 843
+L ++ F P +SS Y ++P K+S VDW +
Sbjct: 1010 HYTFTSVLRLQKYLMMFDP--------NSSENSYFIVPTKKVKDSDSVEVDWAFLELIYE 1061
Query: 844 SPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLV---YATHKKWFYL-VTNIVF 898
R +P+ P + + E S E+++V Y + YL V I
Sbjct: 1062 K-----------RNQVPTFIPEENRKNFVFEPSKFEDAVVSPWYRNQDQPQYLYVAEICT 1110
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK---- 950
N S + ++ + ++ + Y I +++ Q LL N L NRK
Sbjct: 1111 NLNPKSAFPGTEYQTFEEYYLKKYNIVIQNLDQALLDVDHTSARLNFLTPRYVNRKGVAL 1170
Query: 951 ---LEDSESHELEEYFDD--LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
E+ + + E L PELC I F + LP I+HR+ LL+A ++
Sbjct: 1171 PTTSEEKKRAKRENLKQKQILIPELCD--IHPFPATLWRKAVCLPCILHRINALLLADQV 1228
Query: 1006 KHLLSASFPEGA 1017
+ +++ G+
Sbjct: 1229 RMIVAEEIGVGS 1240
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 6/213 (2%)
Query: 63 QLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQA 122
+EL + NIIV LG GKT IA LI ++ I +I +++A + +V ++A
Sbjct: 20 NVELLDASCVRNIIVCLGNNIGKTFIASKLIQNTSNNISVNNGTITLYVADSSVVVSRKA 79
Query: 123 KVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIAL 182
+ V + G+ ++DQ ++V + Y L + I M I L
Sbjct: 80 AYFQRLTNMLVAEYHKGNCNKIKKIKKIPKLDQ--IVVAETETANYMLENELIVMSDINL 137
Query: 183 LIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINS 242
LI +CH P ++MK +Y P I + +S +Q + +N
Sbjct: 138 LILHDCHCVLKNGIVPQKELMKFYYNSSTK--PHILSLASSLFSSNLDLSQ--IKSCLNK 193
Query: 243 LENLLDAKVYSVEDAEDLESFVSSPVVRVYQYG 275
+E++L+ K + + L + + P + +YG
Sbjct: 194 MEDILNCKAETASNVLSLLRYGTHPHEVLIEYG 226
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L GH L+LQA + N G +RLE +GD+ L Y IT+YLY +Y + G+L+
Sbjct: 1631 LSGHPGPSPSLILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCIYENVHEGKLS 1689
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1690 HLRSKQVSN 1698
>gi|159122296|gb|EDP47418.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1384
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 185/683 (27%), Positives = 301/683 (44%), Gaps = 106/683 (15%)
Query: 52 DKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFL 111
D P Q R YQLE+ + +M+ENIIV + + + + R+ Q
Sbjct: 10 DASPYQ-PRNYQLEMLEASMKENIIVAVCSLNSYVKLQNGNDNDPLDGYRERQN------ 62
Query: 112 APTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLY 168
A AL QQ +VI ++ + RT G K W+ ++ Y V+V +L
Sbjct: 63 AYVFALCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVSTHAVLAD 122
Query: 169 CLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTAS 223
L H F+KM +ALLIFDE HH + H KIM+DFY P + K VPRI G+TAS
Sbjct: 123 ALSHGFVKMSQLALLIFDEAHHCTRR--HAANKIMQDFYHPTLTKSGPAAVPRIMGLTAS 180
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPV----- 277
PVV + + +E+ LDA + ++L F P ++ Y P
Sbjct: 181 PVVRSNH-------QELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPTDPAGF 233
Query: 278 --INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDS 327
+ T + E L +I + YI L + D ++L+ +QL R D
Sbjct: 234 RSASLTLGALYHAWENL-DIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRRFVDR 292
Query: 328 MKFCLENLGVCGALHASYILLSG------DETMRNELIEAEGNTIDDSLCRFASQASEVF 381
+ E LG A + Y + D M + EAE + D L + + S++
Sbjct: 293 SRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMSGDWDEAEKAYLVDFLSKIPT--SDIH 350
Query: 382 AAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALS 441
A+ DG S K L+ L + Q+ ++FV + VT A++
Sbjct: 351 FALNDPDGFR-------------ISPKFESLLNFLDSSD-QREFSGLIFVKQRVTVSAMT 396
Query: 442 YILQNLKFLAS-WRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKV 493
+L + +RC VG + S ++ + L+ FRSG NL++AT V
Sbjct: 397 SLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDV 456
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-------VDSGNQRELD- 545
EEG+D+ C +V+ +D P + SFIQ RGRAR QS +A + D ++L+
Sbjct: 457 LEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSADVSRWQDLEQ 516
Query: 546 -LIKNFSKEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSL 595
+I+ + +E + ++ E+M+R + DS+ A ++A ++
Sbjct: 517 AMIEAYQDDERQLQSVSALESLDEEVMERLTG-------------DSTSAVLTADMAMAH 563
Query: 596 LHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQSSME-AAK 651
LH +C+ LP + + +P F + + G + +ILP+ + + + G E AA
Sbjct: 564 LHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAAM 623
Query: 652 KDACLKAIEDLHKLGALNDYLLP 674
K+ +A + L++ G +ND+LLP
Sbjct: 624 KETAFQAYKSLYEFGLVNDHLLP 646
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 196/475 (41%), Gaps = 87/475 (18%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD-------LPPELCQLKIIGFSKDIGSSL 986
L P RN L + L +S+ +++E D + E C + + F+ I
Sbjct: 843 LECAPFPHRRNFLRRQTLANSQV-DVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLF 901
Query: 987 SLLPSIMHRLENLLVAIELKH--LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
+ +I+ +LE L+A L+ L SF S + ++ A++T + +R E
Sbjct: 902 --ISAIVEQLEIELIATRLRDTILRDVSFK-----STDHIITAISTPLAHRLTNYQRYEF 954
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+ LK++V LF H EG L+ R V N L K A L YI +
Sbjct: 955 LGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTK----- 1009
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
R+ S++ + S+ R P + K +ADVVEAL+G
Sbjct: 1010 ----------RLASRKWSAPLISEKLERVP-----------AKRQMSTKVLADVVEALIG 1048
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQF 1223
A D G A A ++ ++ A + +++S P SA M L+ +G+ F
Sbjct: 1049 AAYVDGGHSTAQACIRRFLPEINLHA---VDTRTAARSVAPESARHMMNDRLKDHIGYTF 1105
Query: 1224 LHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
LL++A HPS ++ YQRLE+LGDAVLD +I S +++ + G +T ++
Sbjct: 1106 EDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIKH 1165
Query: 1282 MLVN------------------------NQAFANVAVDQS--FYKFLIFDSNVLSETINN 1315
+VN +FA + +S ++F+ + L +
Sbjct: 1166 AVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARDA 1225
Query: 1316 YV--DYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+ + + + P P K D++ES LGAI +DSG NL
Sbjct: 1226 SLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNL 1280
>gi|390603552|gb|EIN12944.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1524
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 192/714 (26%), Positives = 312/714 (43%), Gaps = 110/714 (15%)
Query: 51 TDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICI 109
TD ++R YQ E+ +++ NI++ + TG GKTHIAVL I YE + K +
Sbjct: 10 TDNGALPVSRSYQREMLAESLHRNIVIAMDTGSGKTHIAVLRIKYE----SERESKKVSW 65
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILL 167
F+APTVAL +QQ +V+ ++ V G + K W++ I+ V+V PQ+LL
Sbjct: 66 FVAPTVALCEQQREVLATALPVSVGIISGSLEPDQWKDARIWQRVIETNRVIVSTPQVLL 125
Query: 168 YCLYHRFIKM-ELIALLIFDECHHAQVKSNHPYAKIMKDFY---------------KPDI 211
+ H ++ M + I LLIFDE HHA K HPY IMK+FY I
Sbjct: 126 DAMRHGYVDMGQHINLLIFDEAHHAADK--HPYNLIMKEFYFRLPPRGTGETPLSANSSI 183
Query: 212 MK-VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVV 269
+ P I G+TASP G NL K+ +E LD+ + + E+L + V P
Sbjct: 184 NRERPMILGLTASPSFG------GNLEKAFAIIEANLDSTIRAPRIFREELAAHVHRPTF 237
Query: 270 RVYQYGPVINDTSSSYVTCSEQLA------EIKREQYISALSRKLH-----------DHQ 312
+ Y D ++ L +I ++ Y+ +L ++L D +
Sbjct: 238 KHVLYPLPTEDYGRPSSRNAQALNAVVASLDIGQDPYVISLRQQLQRALPGPERNRIDQK 297
Query: 313 SLRNTTKQLNRLHDSMK-FCLENLGVC---GALHASYILLSGDETMR--NELIEAEGNTI 366
+ K+ + H ++ F L +C G A + + E + E G +
Sbjct: 298 LSKTIQKKDSYSHKGLREFARAALDICYDLGPWPADWYVRKVIERAQASGESFNTTGMSS 357
Query: 367 DDSLCRFASQAS--EVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRL--- 421
+ R + E+ + D + D V S+K+ LI L + +L
Sbjct: 358 WHNRWRGTEKTYLLELLGRVNLDDPVDLDDEATLVNG---CSEKVNLLISSLLSEKLAAE 414
Query: 422 --QQHMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVGVNAGLK-----SMSR--- 470
+ +VFV R + AL+ IL ++ + +++ L+G + +K ++R
Sbjct: 415 EDHELFTGLVFVTRRDSVLALAEILSRHPRTRGAFKVGCLLGSSDSVKRRAFLDITRELL 474
Query: 471 -NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
+ LE + GE NL+++T V EEG+DIQ C V R+D P + S+ QSRGRAR +
Sbjct: 475 VQSQTETLEDLKIGEKNLIISTAVAEEGIDIQACGAVFRWDPPPNMVSWAQSRGRARKKK 534
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMD---------RTSSDAF----TCSEER 576
S + + D ++ +R+ RE+M+ R D E
Sbjct: 535 STFTLMFDDSGAH-----AKMVEQWERLEREMMNMYYDPSRDMREPEDGMGEHIGVDEVL 589
Query: 577 IYKVDSSGACISAGYGVSLLHRYCSKLP---HDEFFNPKP----------KFYYFDDLGG 623
+KV S+GA ++ V+ L+ +C+ +P H ++ P + + G
Sbjct: 590 EFKVPSTGALLTLQSAVTHLNHFCACIPGGQHAPIYDIDPPDLPEGWHATQTTFTPYQGP 649
Query: 624 TICHIILPANAPIHQ---IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
C +ILP P H VG +S +A+ A A L++ G LND+LLP
Sbjct: 650 WGCVVILPRLLPRHLREFRVGREYTSKASARNHAAFFAYRSLYEAGLLNDHLLP 703
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 146/562 (25%), Positives = 248/562 (44%), Gaps = 86/562 (15%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
K PLL KP R N+L R L++ S + + LP + I S+ LL
Sbjct: 926 KYPLLLLKPGSRRHNMLIPRTLDEVPSSDAKPIL--LPADAA--TAILLSQAESEYALLL 981
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAF 1049
PSI+ RL + A L+ +L S P + ++L A+T E + +RLE LGD
Sbjct: 982 PSILRRLTVTMTAASLREMLFLS-PRLRSIPLDLLTAAITAPVSGEIRNYQRLETLGDTA 1040
Query: 1050 LKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY-IRDQPFDPCQFFA 1108
LK+ L + EG L++++ +AV N L K+A L + IRD+ F
Sbjct: 1041 LKFMASISLLTDYPLWHEGYLSKKKDHAVANVRLAKIALSKELYRWMIRDR-------FI 1093
Query: 1109 LGRRCPRICSKETERTIHSQYDGRAPD---DLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ + P++ E S + + P+ D NAE +G L K +AD+VEA++GA
Sbjct: 1094 VKKWRPKLA----EWQKSSGDEKKMPESEVDTNAE--KGRGQPQLSMKMLADIVEAIIGA 1147
Query: 1166 FIDDSGFKAATAFLKW--IGIQVEFEASQVTNICISSKSFL----PLSASLDMATLEILL 1219
F A + IGI ++ + + I + +++ + + + +D+ +E +L
Sbjct: 1148 AYLHGSFDLAVEVTRLFDIGIDIKTPPTCIERILVRAQASVDDLREIPSQIDV--VERML 1205
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPK-LKPGQL 1276
G+ F ++ LL++A H S G Y+R+EFLGDAVLD ++T YLY K PG +
Sbjct: 1206 GYSFNNKVLLVEALTHASLQGTEGTISYERMEFLGDAVLDMVVTDYLYRRSDKNYGPGHM 1265
Query: 1277 ---------------------TDLRSMLVNNQAFANVAVDQS-----FYKFLIFDSN-VL 1309
T+L + + ++ N ++ S ++ L+ S+ +L
Sbjct: 1266 HLRKQAVVNMHFLAYVCFGISTELEAAMGSSDGVGNTSIRNSSQRVYLWQCLLHSSHRIL 1325
Query: 1310 SETINNYVDYMITPSS-TREVKEGP----------RCPKVLGDLVESSLGAILLDSGFNL 1358
+ N + Y + R + + PK L D+VES++GA+ LDSG +
Sbjct: 1326 DDQSNAFTRYQRNRKAFDRAFQHDTLFPWTALTQLQAPKALSDVVESTIGAVFLDSGGSF 1385
Query: 1359 NTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKD 1418
+ ++ + ++ P E + C D+D+Q P + E K D
Sbjct: 1386 EVIQNLLRRY----------RILPTLERIVDC---DVDVQHPVSRLSIWAAKEKKKVKYD 1432
Query: 1419 KDVFIS--ACATNLSRKEAIRI 1438
D +CA + +E +R+
Sbjct: 1433 FDKADGRISCAIYIDEQEEVRV 1454
>gi|449485333|ref|XP_004157136.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 276
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 140/226 (61%), Gaps = 9/226 (3%)
Query: 54 DPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
DP AR YQLE +KA+++N +V+L TG GKT IA++L+ AH +RKP + +FL P
Sbjct: 15 DPLSFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFVAVFLVP 74
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA+ ++ V + G W++EI+++EVLVM P ILL L H
Sbjct: 75 QVVLVTQQAEALKMHSDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLVMTPAILLNGLRH 134
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
F ++ +I +LI DECHHA+ K HPYA IM +FY + +PRIFGMTASP+ K
Sbjct: 135 SFFRLSMIKVLILDECHHARGK--HPYACIMTEFYHQQLSLGKSDLPRIFGMTASPIKSK 192
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVY 272
G +++ N + I LE+LL++KVY+V +L +FV S+P + Y
Sbjct: 193 GGNSELNYWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFY 238
>gi|70981901|ref|XP_746479.1| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|66844102|gb|EAL84441.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1384
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 185/683 (27%), Positives = 301/683 (44%), Gaps = 106/683 (15%)
Query: 52 DKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFL 111
D P Q R YQLE+ + +M+ENIIV + + + + R+ Q
Sbjct: 10 DASPYQ-PRNYQLEMLEASMKENIIVAVCSLNSYVKLQNGNDNDPLDGYRERQN------ 62
Query: 112 APTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLY 168
A AL QQ +VI ++ + RT G K W+ ++ Y V+V +L
Sbjct: 63 AYVFALCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVSTHAVLAD 122
Query: 169 CLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTAS 223
L H F+KM +ALLIFDE HH + H KIM+DFY P + K VPRI G+TAS
Sbjct: 123 ALSHGFVKMSQLALLIFDEAHHCTRR--HAANKIMQDFYHPTLTKSGPAAVPRIMGLTAS 180
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPV----- 277
PVV + + +E+ LDA + ++L F P ++ Y P
Sbjct: 181 PVVRSNH-------QELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPTDPAGF 233
Query: 278 --INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDS 327
+ T + E L +I + YI L + D ++L+ +QL R D
Sbjct: 234 RSASLTLGALYHAWENL-DIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRRFVDR 292
Query: 328 MKFCLENLGVCGALHASYILLSG------DETMRNELIEAEGNTIDDSLCRFASQASEVF 381
+ E LG A + Y + D M + EAE + D L + + S++
Sbjct: 293 SRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMSGDWDEAEKAYLVDFLSKIPT--SDIH 350
Query: 382 AAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALS 441
A+ DG S K L+ L + Q+ ++FV + VT A++
Sbjct: 351 FALNDPDGFR-------------ISPKFESLLNFLDSSD-QREFSGLIFVKQRVTVSAMT 396
Query: 442 YILQNLKFLAS-WRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKV 493
+L + +RC VG + S ++ + L+ FRSG NL++AT V
Sbjct: 397 SLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDV 456
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-------VDSGNQRELD- 545
EEG+D+ C +V+ +D P + SFIQ RGRAR QS +A + D ++L+
Sbjct: 457 LEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSADVSRWQDLEQ 516
Query: 546 -LIKNFSKEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSL 595
+I+ + +E + ++ E+M+R + DS+ A ++A ++
Sbjct: 517 AMIEAYQDDERQLQSVSALESLDEEVMERLTG-------------DSTSAVLTADMAMAH 563
Query: 596 LHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQSSME-AAK 651
LH +C+ LP + + +P F + + G + +ILP+ + + + G E AA
Sbjct: 564 LHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAAM 623
Query: 652 KDACLKAIEDLHKLGALNDYLLP 674
K+ +A + L++ G +ND+LLP
Sbjct: 624 KETAFQAYKSLYEFGLVNDHLLP 646
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 197/475 (41%), Gaps = 87/475 (18%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD-------LPPELCQLKIIGFSKDIGSSL 986
L P RN L + L +S+ +++E D + E C + + F+ I
Sbjct: 843 LECAPFPHRRNFLRRQTLANSQV-DVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLF 901
Query: 987 SLLPSIMHRLENLLVAIELKH--LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
+ +I+ +LE L+A L+ L SF S + ++ A++T + +R E
Sbjct: 902 --ISAIVEQLEIELIATRLRDTILRDVSFK-----STDHIITAISTPLAHRLTNYQRYEF 954
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+ LK++V LF H EG L+ R V N L K A L YI +
Sbjct: 955 LGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTK----- 1009
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
R+ S++ + S+ GR P + K +ADVVEAL+G
Sbjct: 1010 ----------RLASRKWSAPLISEKLGRVP-----------AKRQMSTKVLADVVEALIG 1048
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQF 1223
A D G A A ++ ++ A + +++S P SA M L+ +G+ F
Sbjct: 1049 AAYVDGGHSTAQACIRRFLPEINLHA---VDTRTAARSVAPESARHMMNDRLKDHIGYTF 1105
Query: 1224 LHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
LL++A HPS ++ YQRLE+LGDAVLD +I S +++ + G +T ++
Sbjct: 1106 EDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIKH 1165
Query: 1282 MLVN------------------------NQAFANVAVDQS--FYKFLIFDSNVLSETINN 1315
+VN +FA + +S ++F+ + L +
Sbjct: 1166 AVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARDA 1225
Query: 1316 YV--DYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+ + + + P P K D++ES LGAI +DSG NL
Sbjct: 1226 SLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNL 1280
>gi|156553056|ref|XP_001605287.1| PREDICTED: endoribonuclease Dcr-1 [Nasonia vitripennis]
Length = 1917
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 220/480 (45%), Gaps = 111/480 (23%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +LF ++ + EG+L+ RS V+
Sbjct: 1375 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQVS 1434
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFALGRRCPRICS-------------- 1118
N NL +L + L + + +P D PC + I S
Sbjct: 1435 NLNLYRLGRQKMLGESMIASKFEPHDNWLPPCYYVPKELEQALIESGVPSAMWNQADIPP 1494
Query: 1119 -----------KETERTIH------SQYDGRAPDDLNA----EVRCSKGH-----HWLHK 1152
+ETE + SQ + A + LN +R + H +
Sbjct: 1495 FSRFSEINDLVRETEHKLEIIKSELSQSEHGALNGLNGLTGDPLRSFIPYNLITQHSIPD 1554
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS-FLP------ 1205
K+IAD VEAL+GA++ G + A F+ W+GI V +V I S + LP
Sbjct: 1555 KSIADCVEALIGAYLIACGPRGALLFMSWLGIHV-LPTEEVVTISDSKPTDRLPGSTPYV 1613
Query: 1206 ------------------------------------LSASLD-MATLEILLGHQFLHRGL 1228
L LD +LE +G+ F +R
Sbjct: 1614 ELGEEGGSTKWTQLRYKKLQEPPSPLFYNVPQPEIELEIMLDGYDSLERSIGYTFRNRSY 1673
Query: 1229 LLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
LLQAF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1674 LLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNN 1733
Query: 1287 QAFANVAVDQSFYKFLIFDSNVLSETINNYVD-------------YMI--TPSSTREVKE 1331
FA++AV F+K+ S L+ I+ +V Y+I E E
Sbjct: 1734 TIFASLAVRCGFHKYFRHLSPGLNTVIDRFVRIQEENGHSISEEYYLIGEREFEEAEEAE 1793
Query: 1332 GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
PK LGD+ ES GAI LDS +L+ VW + + I +FS N+ +PIRELLEL
Sbjct: 1794 DVEVPKALGDVFESLAGAIYLDSNMSLDAVWAVYFEIMKSEIEQFSANVPKSPIRELLEL 1853
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 265/1129 (23%), Positives = 442/1129 (39%), Gaps = 234/1129 (20%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAPTVA 116
R++Q+EL A E+NII+ LG +T I +I ELA R+ I+L
Sbjct: 17 REHQVELLYSAKEKNIIICLGKITEQTFIVTKVIQELAINNRRTLSHDGKRTIYLLENEE 76
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID-QYEVLVMIPQILLYCLYHRFI 175
++A I++ KV C K S KE +VL++ + L I
Sbjct: 77 ACTEKANHIKQLTDLKVLK-CNDVKDFDS-----KEFSSNTQVLILTVDMCSKLLLANKI 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
I LLI D+CH+ + +N +KI+ F D +I G A P+ A
Sbjct: 131 NPNQINLLIIDKCHN--LVTNCKLSKILNIFRNCD--STTKIIGF-AVPLYSLTKEPGA- 184
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
L I +E+LL ++ E A DL S + +Y P + +Y +++ E
Sbjct: 185 LSYEIERIESLLQCQI---ETASDLLS--------ILRYSPKPKEYLLAYKIEDKKVVEK 233
Query: 296 KREQYISALSRKLHDHQS----------LRNTTKQLNRLHDSMKFC------LENLGVCG 339
+ S L DH+ L + K N +H + L LG+
Sbjct: 234 DITDFTSFTLNFLSDHRYDPTEIYSEEFLEDIKKIPNPVHKPCQMIEEFLRILNTLGLWA 293
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE- 398
A A+ +LL E ++ + + F+ A+ D I S L+ E
Sbjct: 294 ADKAALVLLMLIEKLKIK------TPYERHYLLFSVVATLFLKIRAYCDDIFSGLTEAEK 347
Query: 399 VLKEPFFSKKLLRLIGILSTF-----------------------RLQQHMKCI------- 428
+LK F + K+ RLI +L TF + Q H K +
Sbjct: 348 ILK--FSTPKIHRLIEVLKTFSPPPKEETVTPNNRVEKNDSANTKDQNHDKSVKNLHKKT 405
Query: 429 -------------------------VFVNRIVTARALSYILQNLKFLASWRC----HFLV 459
+FV+ VTA+ L Y+L + +C HFL
Sbjct: 406 DGGFKKFRPFRHSRGLTDPDLLCGVIFVDDAVTAKVLFYLLNEMS-----KCEESLHFLS 460
Query: 460 GVNAGLKS-----------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+ KS + + +L+KFR E NLL++T + EEG+DI C V+R
Sbjct: 461 PLFTSEKSNDELFCGRDLELEYRKQEEVLKKFRIHECNLLISTAILEEGIDIPKCNFVMR 520
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGN-----QR--------ELDLIKNFSKEED 555
F+ P+ S++Q + RAR + + LV QR ++ L K SKE D
Sbjct: 521 FEFPKNYQSYVQCKSRARATDALHVLLVPEIESEVYIQRLAHYHYIEKILLSKCTSKEAD 580
Query: 556 RMNREIMDRTSSDAFTCSEERIYKVDSSGAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPK 614
+ T +DA+ +D A ++ +SL++RYC+KLP D F P+
Sbjct: 581 E-----CEETEADAYDSVLPEYKPLDEEDAPKVTLNSAISLVNRYCAKLPSDTFTKLTPE 635
Query: 615 F----YYFDDLGGTICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
+ ++ IC + LP N+P+ + I P + AK+ A L+ LHK ++
Sbjct: 636 WKINNITVENKQMYICSLRLPINSPLKYSISSYPMPNKALAKRMAALQMCVCLHKENEID 695
Query: 670 DYLLP---------QEDNATEDEPMLFSSD-SDSYEGEGSRGELHEMLVPAVLRQSWTKS 719
DYLLP ED+ P + D +++ G R + + + L +
Sbjct: 696 DYLLPVGKENFKAHPEDSEVPALPDDENMDLTEARPGTTKRRQYYYKKIADALIDCKPEL 755
Query: 720 QYPVRLNFYFMQFI---PDPADRIYR------------EFGLFVKSLLP--------GEA 756
+ P L Y + + P P ++ R FG+ + +P +
Sbjct: 756 EEPCYL--YHINMVLSCPLPEEQNTRGRKIYPPEESDIGFGILTRKKIPKVCPFPIYTRS 813
Query: 757 EHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESS 816
++VDL L++ V+ + S I + F +L ++ F P +
Sbjct: 814 GEVRVDLKLSKETVVLDE---SKIDKVVSFLNYTFTNVLRLQKYLMLFDP--------NV 862
Query: 817 SSTFYLLLPVIFHKNS----VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS 872
S Y+++PV N+ VDW + C+ + +R S+P+ + +
Sbjct: 863 SENSYIIVPVKKQPNASDICVDWDFV-ECIYA----------NRDSMPNRISEENRQNFV 911
Query: 873 SE-SDVENSLVYATHK-----KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHL 926
E S ++++ ++ ++FY V I N S + +D S+ ++ YGI +
Sbjct: 912 FEASKYHDAVIMPWYRNQDQPQYFY-VAEICNHLNPKSSFPGADYSTFEEYYSKKYGIQI 970
Query: 927 KHPKQPLLRAKPLFRLRNLLH----NRK-------LEDSESHELE--EYFDDLPPELCQL 973
++ +QPLL N L NRK E+++ + E E L ELC
Sbjct: 971 QNLEQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILIAELCA- 1029
Query: 974 KIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
I F + LP I++R+ LL+A +++ ++ S G E E
Sbjct: 1030 -IHPFPASLWRQAVCLPCILYRINALLLADQIRRHVAQSISLGQETLDE 1077
Score = 47.8 bits (112), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L GH L+LQA + N G +RLE +GD+ L Y IT+YL+ Y + G+L+
Sbjct: 1368 LDGHSGPSPSLILQALTMSNAND-GINLERLETIGDSFLKYAITTYLFCTYNNIHEGKLS 1426
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1427 HLRSKQVSN 1435
>gi|443725259|gb|ELU12939.1| hypothetical protein CAPTEDRAFT_223153 [Capitella teleta]
Length = 1651
Score = 183 bits (464), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 150/475 (31%), Positives = 219/475 (46%), Gaps = 81/475 (17%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ LT + F+LERLE +GD+FLK+A+ +L+ + + EG+L+ RS V+N N
Sbjct: 1133 LILQTLTMSNANDFFNLERLETIGDSFLKFAITVYLYCEYPGIHEGKLSYLRSKQVSNYN 1192
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQ--------------FFALGRRCPRI------------ 1116
L KL + L + F+P + + L R I
Sbjct: 1193 LYKLGKKKGLPDCMVAVKFEPTENWLPPGYVIRKEGAYKGLNVRIASIPAPLLAPAFNES 1252
Query: 1117 CSKETERTIHSQ---YDGRAPDDLNAEVRCSKG--------------HHWLHKKTIADVV 1159
SK+ E+ Q + + AE KG H L K+IAD V
Sbjct: 1253 GSKKEEQLPDGQMEKFTKELEECTKAEDEKLKGSDIPHMLIPYNLQTQHSLPDKSIADGV 1312
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGIQV--EFEASQVTNICISSKS---------FLPLSA 1208
EAL+G ++ G +AA F+ W+G++V + + N+ +S S +S
Sbjct: 1313 EALIGCYLVTCGQRAALQFMSWLGLRVLPNVKPADKNNLAMSGFSCLPPPPSPLLTHVSN 1372
Query: 1209 SLDM--------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDY 1258
S D+ E + ++F R LLQAF H S+ N + CYQRLEFLGDA+LDY
Sbjct: 1373 SEDVLKHLLDGYEEFEEKICYKFRDRSYLLQAFTHASYHYNTVTDCYQRLEFLGDAILDY 1432
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
+IT +L+ K PG LTDLRS LVNN FA +AV +F+K+ S L I+ +V
Sbjct: 1433 VITRHLFEDSEKHSPGVLTDLRSALVNNNIFAALAVKWNFHKYFRAISPQLFYVIDKFVT 1492
Query: 1319 YM--------------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
+ +E PK LGD+ ES GAI LDSG +L+TVW++
Sbjct: 1493 WQKDRNDEINLDEEFGELEEDGEGTEEDIEIPKALGDIFESVAGAIYLDSGMSLDTVWQV 1552
Query: 1365 MLSFLDP-ILKFS-NLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
+ P I F+ + +P+RELLE+ + P GK V GK
Sbjct: 1553 YYRMMKPQIDAFTERIPKSPVRELLEM-EPETAKFEKPERTMDGKIRVTVNVVGK 1606
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 168/659 (25%), Positives = 266/659 (40%), Gaps = 102/659 (15%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASW-------RCHFLVGVNAGLKSMSRN------AMK 474
+VFV R TA L+ ++ L +W + H + G AG + S +
Sbjct: 426 VVFVERRHTAFVLNKLIVEL---CNWDTDLFFVQSHHICGGAAGPTNNSSQQTPLYKKQE 482
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
IL++FR +LNLLV+T V EEG+D C LV++FD P + S++QS+ RAR +S+Y
Sbjct: 483 EILKRFRQKDLNLLVSTSVLEEGIDFPKCNLVVKFDAPTSYRSYVQSKARARALKSKYYI 542
Query: 535 LVDSGNQRELDL-------IKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACI 587
L + NQ I+N + +RE R DA V GA +
Sbjct: 543 LTEPTNQGPFHTTLSTYKGIENILISKCLQSRENPLRDDDDASLPDNFMPVYVSPGGAKV 602
Query: 588 SAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPIHQ-IVGT 642
+ ++L++RYC KLP D F PK + ++ + LP N+PI + I G
Sbjct: 603 TMSSAIALVNRYCGKLPSDAFTHLTPKCQVQAINEADQETWRATLQLPINSPIKRPIYGE 662
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP---------QEDNATEDEPMLFSSDSDS 693
S + A LK E LH+ G L+D+LLP E+N ED + +
Sbjct: 663 AMPSRKLAMMAVALKTCEILHQQGELDDHLLPIGKEMIKYEDEENEWEDH----ETQGHA 718
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF--------------IPDPADR 739
G R + + + L + P L + + I P D
Sbjct: 719 RPGTTKRKQYYLKKTASTLL-GQPQPNEPCHLYIFDTRLTCPITEEQNTRGRKIHAPEDS 777
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG---IMQAQQFQEM--FLKVI 794
R FG+ +P H V R V + P A+Q ++ F + I
Sbjct: 778 A-RGFGIITVRKIPL-VPHFPV---FTRSGEVTVSIDPVDSEFTFTAEQLPQICHFHRFI 832
Query: 795 LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS--VDWKIIRRCLSSPVFGTPGG 852
R E P+ D SS Y ++P++ + VDW + SP+ T
Sbjct: 833 FTRV-LRLEKDPMVFDPKKAMSS---YFIVPLLKDADGIRVDWDFVGEIQKSPLHLT--- 885
Query: 853 SVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHK-----KWFYLVTNIVFEKNGYSPYK 907
RK LP + +E D +++V +++ ++FY V I + N P+
Sbjct: 886 --RRKYLPD---AKKEAFVFNEDDFHDAVVMPSYRNIDQPQYFY-VAEIRKDLNPKCPFP 939
Query: 908 DSDSSSHVD-HLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------SESHELE 960
+ + + S YG+ + + QPLL NLL R + + S E
Sbjct: 940 SPELYDTFELYYKSKYGLGITNLDQPLLDVDHTSARLNLLTPRYMNQKGVALPTSSAETR 999
Query: 961 EYFDD-------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
+ L PELC I F + +P+I++R+ LLVA E++ ++S +
Sbjct: 1000 RARRENLQQKQILIPELCD--IHPFPASLWRKAVCIPAILYRMNYLLVAEEMRLMISTA 1056
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 12/211 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTVA 116
R YQ+ L + A++ N IV L + KT IAV+LI ELAH +R+P + +FL +
Sbjct: 17 RTYQVALLENALKHNTIVCLASR--KTFIAVMLIKELAHQVRQPLQLGGKRTLFLVYSDD 74
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V+ Q KV+ V C S + W++E +++VLV+ Q+ + L +
Sbjct: 75 DVEAQVKVLGLHTDLSVGECCADS----TVAQWQEEFVKHQVLVISAQVFVEILLQGAAQ 130
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ LLIFD+C HA + Y KIM+ + + PRI G+T S ++ + S L
Sbjct: 131 ISQTNLLIFDDCQHA--IEDPAYEKIMQFYTDQTNGQRPRILGLTTS-ILSEQISCPIAL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
K++ +LE +L + V + D +++ + + P
Sbjct: 188 EKTLATLEKVLHSTVETSSDIINIDLYGNKP 218
>gi|195124758|ref|XP_002006854.1| GI21295 [Drosophila mojavensis]
gi|193911922|gb|EDW10789.1| GI21295 [Drosophila mojavensis]
Length = 1728
Score = 183 bits (464), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 245/1043 (23%), Positives = 419/1043 (40%), Gaps = 132/1043 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTV 115
AR YQL L + ++ N I+YL TG GKT++A+L + + + K + +F+ TV
Sbjct: 12 ARSYQLRLVEYIVKRNGIIYLPTGSGKTYVAILALKRFSQNMDKSIEEGGQRALFICNTV 71
Query: 116 ALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L +QQA + + FKV + G G+ K + W++EI ++VLV Q++L +
Sbjct: 72 ELARQQAICVRKLTNFKVGYYVGEQGTDNWKKN-KWDEEIHNHQVLVGTAQVILNLISEN 130
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDF---YKPDIMKVPRIFGMTASPVVGKGA 230
++ + +++ I DECHH K HPY + MK + I K+PRI G+T + G
Sbjct: 131 YMSLTSVSIAILDECHHGTGK--HPYHEFMKLVQMQMESGIKKLPRIVGLTGVLIKGNEI 188
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFV---SSPVVRVYQYGPVINDTSSSYVT 287
A K + LE + +V D ++LE+ + + P + Y S V
Sbjct: 189 KEVA---KRLKELETTYCGNIITVSDTKELENVMLHSTKPRESIMTY--------KSEVQ 237
Query: 288 CSEQLAEIKRE--QYISALSRKLHDHQSLR-----------NTTKQLNRLHDSMKFCLEN 334
++ EI++ Y L + HQ +R N + + + L+N
Sbjct: 238 TFGKIEEIRQRIRNYFYTLELQDIGHQPVRMSKGMRIQREPNKKSAIKLQINDFLYQLDN 297
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR----DGI 390
G+ A L+ E R + + S + + R D +
Sbjct: 298 YGIYAGSIAIVSLIVEFEIKRRQAETLSLRNMYRSAITLCESVRHMLVSKLRDMLDDDQM 357
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQ--HMKCIVFVNRIVTARA-----LSY 442
+ D+ E + F + K+ + L TF +Q + C+VFV R T + L+Y
Sbjct: 358 SDDMINTEEVIMNFSTPKVQLFLQYLKQTFANKQPKDICCLVFVERRYTCKCIYGLLLNY 417
Query: 443 ILQNLKFLASWRCHFLVGVNA---GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
I + F+VG + + R +KS +++FR GE N+++ + V EEG+D
Sbjct: 418 IAATPELRNVLFPQFMVGRSGIFHDFDKLERRWLKSAIQEFRDGEANIMICSSVLEEGID 477
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-VDSGNQRELDLIKNFSKEEDRMN 558
+Q C VI D +T ++Q++GRAR ++ + + D Q+ I + K +
Sbjct: 478 VQACNYVIILDPIKTFNMYVQTKGRARSKEASFMIISSDLEKQKTSTQILQYRKAHADIG 537
Query: 559 REIMDRTSSDA---FTCSEERIYK-----VDSSGACISAGYGVSLLHRYCSKLPHDEFFN 610
+ DR A E ++ SGA + A ++L+HRYC +P D F
Sbjct: 538 EYLKDRVLERADPQLNDINEHFQDDIPPFINGSGAVLLASSALALVHRYCQHMPSDAFGI 597
Query: 611 PKPKF----------YYFDDLGGTICHIILPANAPIHQIV---GTPQSSMEAAKKDACLK 657
P F + D + + LP N+ + + + P + + AK A K
Sbjct: 598 VLPWFKLLEQEERKAFTKDWAQKYVVSLTLPLNSALRETIYSDAMPYTRL--AKISAAFK 655
Query: 658 AIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT 717
L+++G LN+ LP A E + + + ++ G + T
Sbjct: 656 TCVKLYQMGELNERFLP--TTAIERVAEIANIHFEHWKNYGDNVTFKRSDREQINSNMKT 713
Query: 718 -KSQYPVRLN-----------FYFMQFIP-----DPADRIY------REFGLFVKSLLPG 754
++YP LN Y + P D IY R + L + LP
Sbjct: 714 YATKYPEELNDAMPQVGATCYAYEISVEPHYDRNDYTSHIYDSLQTRRNYALLLTKRLPR 773
Query: 755 EAE------HLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLG 808
AE K+ H+A + + Q Q F M + IL + FV
Sbjct: 774 MAEMPLFSHQGKMHAHVAEQPRAVVIQTEEQLEQLQHFHVMIFRDIL--RIWQPFFV--- 828
Query: 809 KDDYCESSSSTFYLLLPV-IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQ- 866
+ S+ +L++P+ +DW ++++ P +R+ LP P
Sbjct: 829 ---FDRHSNENSFLVVPLSAMPGVDIDWPLVQQFQRLPK-AHSRSLAERQQLPPPNPEDF 884
Query: 867 ---LHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYG 923
+ W + D + LV H L +++ EK+ Y + S + +Y
Sbjct: 885 VGTIVTQWYANYDEKRMLVTKVHTDLTPL--SMMEEKHQDKNYYEFTMSKY-----RNYI 937
Query: 924 IHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIG 983
+ H +Q L+ + L N ++++ S + L PELC GF D+
Sbjct: 938 GDVVHKQQFLIEVRELSDQLNFYVQQRVKSSAQSKARAKV-MLIPELC--FNFGFPGDLW 994
Query: 984 SSLSLLPSIMHRLENLLVAIELK 1006
L LPSI+ RL +L A L+
Sbjct: 995 VKLLFLPSILRRLHYMLHAETLR 1017
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 211/473 (44%), Gaps = 115/473 (24%)
Query: 1025 LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
L A+T + F +ER E+LGD FLK + +L + +EG LT+ +S V+N NLL
Sbjct: 1202 LAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANRYPDWNEGILTQVKSTLVSNRNLL 1261
Query: 1085 KLAARNNLQVYIRDQPFDPCQFF------------ALGRRCPRI---------------- 1116
+ ++ I F P + AL + P +
Sbjct: 1262 YCLSETDIPQRICSTLFTPKYSWLPPSVSLPQNVKALWKENPGVAALVGPHNLRNLSISE 1321
Query: 1117 --------CSKETERTI-----HSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALV 1163
C K++ +Q A D ++E+ G + K IAD +EA++
Sbjct: 1322 EELFGDGNCGKQSFINFVNGCQANQQSHHAGLDYSSEINFCLGQVQMPDKLIADTLEAIL 1381
Query: 1164 GAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLSA 1208
G + + G L++ GI ++ S++ TNI FL
Sbjct: 1382 GVVVKNYGLHHGFRMLEYFGICKPDNGKPLTQLLDLQLGGSRMRTNISQHEVDGFL---- 1437
Query: 1209 SLDMATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
++ LE LG+ F R LLQA HPS NRL GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1438 -INHQYLEKNLGYTFCDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFE 1496
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS-- 1324
++ PGQLTDLRS LVNN A + V F+ F++ ++ +LSE+I N+V + T +
Sbjct: 1497 HKTRMTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLSESIQNFVQFQETQNHR 1556
Query: 1325 ------------------------------STREVKEGPR-----------------CPK 1337
+ ++ K R PK
Sbjct: 1557 VTNHVRILMEEKDVQPEPLDSDEELEMAELAAKQAKPAIREADAPKVGEFNISHNVDVPK 1616
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFS-NLQLNPIRELLE 1388
LGD++E+ + A+ LD +LNT W+++ +P +L+FS N+ LNPIR+L E
Sbjct: 1617 ALGDVLEALIAAVYLDCR-DLNTTWQVVYKLFEPELLEFSRNVPLNPIRQLFE 1668
>gi|226286856|gb|EEH42369.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1450
Score = 183 bits (464), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 217/809 (26%), Positives = 355/809 (43%), Gaps = 105/809 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQLE+ + +++ENII+ + TG GKT IA+L I +EL + + FL PTVAL
Sbjct: 31 RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCT---EDKLVWFLTPTVALA 87
Query: 119 QQQAKVIEESIG-FKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ K I + + ++ R G K + W+ + +++V PQILL L H FI
Sbjct: 88 DQQHKNISQQLSVYQTRLLLGTDKVHYWSTKKIWDDVLLNIKIVVSTPQILLDALSHGFI 147
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASPVVGKG 229
M I+LL+FDE HH S P IM+ FY + + +P I G+TASPV
Sbjct: 148 TMSRISLLVFDEAHHCDGFS--PANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVTRAD 205
Query: 230 ASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
P+S+ +E L+A+ + E+L +V P + ++ +I+ +
Sbjct: 206 -------PESLKRVEKNLNARCETPRIHREELMRYVHRPELYTVKFRTDSLIHSDMLQNL 258
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLG----VCGALH 342
+ +I+++ +I L R+ + R+ K L L CL L +H
Sbjct: 259 SRIVGTVDIEKDPWIKRLRRQ----EDRRSQGKLLYALEKRKTHCLSQLSKLLRQAINVH 314
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD-----GIASDLSCI 397
+ D + +E+IE R Q E+ +++ R + + S+LS
Sbjct: 315 DDLGPWAADAFI-SEVIERLETK------RTMYQHVELHSSLDREEEAFIFELLSELSIS 367
Query: 398 EVLKE-----PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ---NLK- 448
V ++ S K+ L+ +L + I+F + T LS+++ LK
Sbjct: 368 PVKQDWDSESNIVSTKVNLLVELLESEHTAD-FTGIIFAQQRATVTMLSHLISRHPRLKD 426
Query: 449 ------FLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
FL C+ +R+ SI + RSG+ NLL+AT V EEG+D+
Sbjct: 427 IIVTGAFLGD-ACYASRTSTITEVHDTRSQKGSI-DDLRSGKKNLLIATSVLEEGIDVSA 484
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN---- 558
C LV+ FD + + SFIQ RGRAR +S++ +DS E K +++ E+ M
Sbjct: 485 CHLVVCFDAIKNLRSFIQRRGRARKERSKFVMFLDSDKISEE---KQWTRLEEVMRSIYE 541
Query: 559 ---REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF 615
R + D + + ++ +++S+GA ++ L +C+ L H F + +P F
Sbjct: 542 DDMRRLEDVMARENIVEEGDQYLRIESTGALLTLENARQHLEHFCATL-HYAFTDSRPHF 600
Query: 616 YYFDDLG-GTI-CHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALND 670
+ + G GTI ++LP + I G+ + E A++DA +A LH G +ND
Sbjct: 601 IFDESEGDGTIAAKVVLPNVLDPKFRVIHGSKRWKTEQMAQRDASFQAYLKLHNEGLVND 660
Query: 671 YLLPQEDNATEDEPMLF----------SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ 720
YLLP ED + + S D + SR E + ++ S
Sbjct: 661 YLLPVHWRGDEDPKLEYCEQRPSVVKISRHFDPWSTIASRWETTQKFYQTLIEISSDSIP 720
Query: 721 YPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGI 780
+P + +P P D F +F E+ +HL + S +T +
Sbjct: 721 FP---QMRLVLPVPLPCD---ISFNIFWN-------ENNTFKVHLKQESSSITASLIKHA 767
Query: 781 MQAQQ--FQEMFL-KVILDRSEFNSEFVP 806
QA F MF K+ DR +F+ F+P
Sbjct: 768 AQATHAIFSSMFSHKMPSDRFDFSCLFLP 796
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 187/457 (40%), Gaps = 90/457 (19%)
Query: 988 LLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L PSI+H++E L+A EL K +LS P G +++ AL +E + +R+E LG
Sbjct: 930 LCPSIIHKVETFLIAEELNKTILS---PVGF-TDLNLVITALCAPDAREATNYQRIEFLG 985
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK+ L + EG L+ + V+N L A L +I F ++
Sbjct: 986 DSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETGLDKFIFMDIFTGVKW 1045
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR E + + + KT+ADV+EAL+GA
Sbjct: 1046 ------RPRYNKAHVEEQDIPRRE-------------------MSTKTLADVIEALLGAA 1080
Query: 1167 IDDSG-------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
D G K ++W+ F+A + N LP S D +E L+
Sbjct: 1081 TIDGGRTKVEKCLKIFLPEIRWMPFADRFDA--LYNSVPEVYENLPSSWFRD---IESLV 1135
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
G+ F + L QAF HPS YQRLEFLGD++LD++I ++++ + + +
Sbjct: 1136 GYIFNKKVFLAQAFTHPSNPGSTMSYQRLEFLGDSILDHIIVDHIFNSPRNFQHVDMHLM 1195
Query: 1280 RSMLVN-------------------------NQAFANVAVDQ-SFYKFLIFDSNV----- 1308
R+ L N N F + + S ++++ ++
Sbjct: 1196 RASLANADFLAFLCIGMTTEEERGEIVEASRNGTFTRMTTRKISLWQYMRHGTSWELTVS 1255
Query: 1309 LSETINNYVDYMITPSSTREVKEGP----------RCPKVLGDLVESSLGAILLDSGFNL 1358
+T+N Y + T+ + E R K DL+ES LGAI +DS +L
Sbjct: 1256 QQQTVNQY--QALKADITKALYESDTYPWALLSRLRAQKFFSDLIESVLGAIFIDSHGSL 1313
Query: 1359 NTVWKI-----MLSFLDPILKFSNLQLNPIRELLELC 1390
+ +++FL IL+ ++P + L E+
Sbjct: 1314 DACAAFLERIGLMNFLRRILQDEIDIMHPKQRLGEMV 1350
>gi|350639413|gb|EHA27767.1| hypothetical protein ASPNIDRAFT_211065 [Aspergillus niger ATCC
1015]
Length = 1372
Score = 183 bits (464), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 183/684 (26%), Positives = 303/684 (44%), Gaps = 118/684 (17%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P R YQ+E+ + +++ENIIV + Y L LI FL PT
Sbjct: 15 PTYRPRSYQVEMFEASLKENIIVTVLRSS----------YALLQLI--------WFLTPT 56
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ K I ++I + RT K W+ + + +V+V +L +
Sbjct: 57 VALCLQQFKFISDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAVLADAMS 116
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
H F+K+ + L+IFDE HH + HP KIM+DFY P + + VP+I G+TASPVV
Sbjct: 117 HGFVKITQLGLMIFDEAHHCMRR--HPANKIMQDFYHPALERHGAEAVPKILGLTASPVV 174
Query: 227 GKGASAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYGPVIND---- 280
+ + +E+ LDA K +E L + P ++ + PV+ D
Sbjct: 175 RSNR-------QELLKIESNLDAVCKTPRTHRSE-LMTHTHRPHLQQILFTPVLLDDLQV 226
Query: 281 ---TSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMK 329
T + V+ L ++ + YI L + D ++L+ QL R
Sbjct: 227 GSKTLKALVSAWTSL-RLEDDPYIKKLRKSPLDGRALQKVLESGKTYCNDQLKRFATRSL 285
Query: 330 FCLENLGVCGA---LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
E LG A +HAS E ++A D++ + + + + +
Sbjct: 286 HIFEELGEWAADYFIHASI-----------EQLKARAGNSADTMGWTDEEKAYLLDIVSK 334
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
DL+ + + P S K L+ L T + + + ++F + T + +L
Sbjct: 335 LPIPNIDLTHSDPDRIPI-SSKFRSLLEFLDT-KGEPNFSGLIFAKQRATVSVMEKLLSI 392
Query: 447 LKFLA-SWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+RC VG + G + + L +FR+G+ NL++AT V EEG+D
Sbjct: 393 HPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGID 452
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNF 550
I C +V+ FD P + SF+Q RGRAR QS YA + + ++ E +I+ +
Sbjct: 453 ISACSVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAY 512
Query: 551 SKEEDRM---------NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+E R+ N E+++R +V S+GA ++A V+ L+ +C+
Sbjct: 513 EDDERRLREAWALEAINEEVVER-------------LEVQSTGAVLTADTAVAHLNHFCA 559
Query: 602 KLPHDEFFNPKPKFYYFDD----LGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDA 654
LP + + +P+F Y D L GT+ LP+ + + +I G E AA+K+A
Sbjct: 560 VLPRQPYASNEPEFSYEKDDADLLRGTVT---LPSCVHPGVRRIQGQRWWQTERAARKEA 616
Query: 655 CLKAIEDLHKLGALNDYLLPQEDN 678
+A + L++ G L+D+LLP + N
Sbjct: 617 AFQAYKRLYEFGLLSDHLLPFKRN 640
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 189/461 (40%), Gaps = 79/461 (17%)
Query: 943 RNLLHNRKLE----DSESHELEEYFDDLPPELCQLKIIGFSKDI-GSSLSLLPSIMHRLE 997
RNLLH + L DSE+ + + E C + + +++ I G +S+ I+ RLE
Sbjct: 839 RNLLHRQTLAAKQPDSETPAISSKIRLILAENCTIDKLPYAETIFGRFISV---ILDRLE 895
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
LVA L + S ++ A+T Q + +R E GD+ LK+ V
Sbjct: 896 ATLVATRLCETILRDLEFS---SIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQ 952
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF H EG L+ R V NS L + A L +I ++ F P ++ A P I
Sbjct: 953 LFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSA-----PLIS 1007
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
K + + + K +ADVVEAL+GA D GF AA A
Sbjct: 1008 EK---------------------ISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHA 1046
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+ +V E T + + +L+ L +G+ F ++ LL+++ HPS
Sbjct: 1047 CIHRFLPEVNLENIDRTTAPMPKDGV--TNHTLNDDHLMAHIGYTFTNKSLLVESLTHPS 1104
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA----- 1290
F+ YQRLEFLGDAVLD I S L S ++ G +T ++ +VN A
Sbjct: 1105 CQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCME 1164
Query: 1291 --------NVAVDQS-------------FYKFLIFDSNVLSETINNYVDYM--ITPSSTR 1327
NV V + ++F+ + L + + + S
Sbjct: 1165 FALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIH 1224
Query: 1328 EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+K P P K D++ES LGAI +DS NL
Sbjct: 1225 GLKHSPSYPWKSLSQLNADKFFSDIIESILGAIFIDSHGNL 1265
>gi|302661784|ref|XP_003022555.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
gi|291186507|gb|EFE41937.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
Length = 1468
Score = 182 bits (463), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 192/692 (27%), Positives = 318/692 (45%), Gaps = 87/692 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ + ++++NIIV + TG GKT IA+L I L R + FLAP V L +
Sbjct: 58 RGYQREMLEASIKQNIIVAMDTGSGKTQIAILRIRH--ELERCSNDKLVWFLAPRVPLAE 115
Query: 120 QQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ + I E + ++ + G +R + W+ + ++V PQILL L + FI
Sbjct: 116 QQYRAISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFIT 175
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV------PRIFGMTASP---VVG 227
+ IALL+FDE HH VK++ P KIM++FY I ++ P I G+TASP ++
Sbjct: 176 LRRIALLVFDEAHHC-VKAS-PENKIMRNFYHARIDQLSETNDLPSILGLTASPTSKLIE 233
Query: 228 KGASAQA--NLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVR--VYQYGPVI-ND 280
S Q +L LE LDA K ++ E++ +V P +R YQ +I ++
Sbjct: 234 DSLSRQCECSLLMESRQLEQNLDAFCKTPAIH-REEMMQYVHIPELRKISYQKDSIIPHN 292
Query: 281 TSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLH---DSMKFCLENL-- 335
++ + + +I+ + + K D +S + L R D +K C +
Sbjct: 293 MKVKFLHMLDDI-DIESDPFFQRYKGKT-DSKSTERFLRALARKTPGLDQLKRCFTKVSH 350
Query: 336 --GVCGALHASYILLSGDETMRNE---LIEAEGNTIDDSLCRFASQASEVFAAICRRDGI 390
G G +S + R E L++ + D F A E AI
Sbjct: 351 MYGELGHWASSAFISEIYRRTREERAKLVDHSWSEWDRDDSSFMCNALEPVVAIMGERCW 410
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
S + S+K+ L+ +LS+ L + I+FV + TA LS+++ L
Sbjct: 411 NSTPDAV--------SQKVEHLVDLLSS-ELTGSSRGIIFVEQRATAVMLSHLISRYPEL 461
Query: 451 ASWRCHFLVGVNA------GLKSMSRNA-MKSILEKFRSGELNLLVATKVGEEGLDIQTC 503
A + + +G +A L +S+ MK+ ++ +SG+ NLLVAT V EEG+D+ C
Sbjct: 462 AHIKSDYFLGNSAFSARKADLTELSKPGDMKNSIDDLKSGKKNLLVATSVLEEGIDVSAC 521
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNRE 560
LV+ FD P+ + SF+Q RGRAR S++ D+ ++ + +++ KE N+E
Sbjct: 522 DLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAEDDTATYKDWEAMEDIMKERYLSNKE 581
Query: 561 IMDRTSSDAFTCSEERI-YKVDSSGACISAG-----------YGV----------SLLHR 598
+DR + E +++S+G ++ G Y V + L
Sbjct: 582 FIDRLREEDDEEEVEYESLRIESTGYGVTPGLLLWDCLLTIYYTVRALLTLENARAHLSH 641
Query: 599 YCSKLPHDEFFNPKPKFYY----FDDLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AK 651
+CS +P EF + +P F D+ ++LP + + G E AK
Sbjct: 642 FCSTIPC-EFTDTQPDFIISKTGIKDM--LTAKVLLPTVLDLQFREFEGIQAWKREKMAK 698
Query: 652 KDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
+DA +A L+K +ND+L+P+ T++E
Sbjct: 699 RDAAFQAYLQLYKASLVNDHLMPEHCRTTDEE 730
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 174/408 (42%), Gaps = 66/408 (16%)
Query: 988 LLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+PS++H + L+A EL K +LS P G + + +++L A+T +E + +RLE LG
Sbjct: 984 FIPSLIHTIGRYLLAEELSKTILS---PIGFQ-NIQLVLTAITATSAREDTNYQRLEFLG 1039
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK L H EG L++++ + V+NS L K A L +I F ++
Sbjct: 1040 DSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILTTCFTGAKW 1099
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
L +S Y NA K L KT+ADVVE+L+G
Sbjct: 1100 RPL---------------YNSTYTN------NAGKIGEKSTRKLSTKTLADVVESLIGVA 1138
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEAS--QVTNICISSKSFLPLSASLDMATLEILLGHQFL 1224
I D G L+ ++ + S ++ + S+ F ++ +E L+ + F
Sbjct: 1139 IIDGGENKVLRCLELFLPEINWLPSGERIEILYDSAPDFNDDCPRDILSKIEPLIDYSFT 1198
Query: 1225 HRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
+ LL + HPS G YQRLEFLGD++LD ++T L+ ++ + +R+ LV
Sbjct: 1199 KKALLAASLSHPSNPISGMTYQRLEFLGDSILDNIVTRALFRCKREIPHQDMHLIRTALV 1258
Query: 1285 NNQAFA----NVAVDQ----------------------SFYKFLIFDSNVLSETINNYVD 1318
N A N + D+ S ++++ S + ET
Sbjct: 1259 NADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMSHSSTDIVETQQAMAR 1318
Query: 1319 YM--ITPSSTREVKEGPR----------CPKVLGDLVESSLGAILLDS 1354
+ ++ G R PK D++ES LGAI +DS
Sbjct: 1319 TFEELRDQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIFIDS 1366
Score = 47.8 bits (112), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
YQRLEFLGD+ L + L + +P G L+ + +V+N AVD +F++
Sbjct: 1032 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1091
Query: 1304 --FDSNVLSETINN-YVDYM--ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F N+ Y + I STR++ K L D+VES +G ++D G N
Sbjct: 1092 TCFTGAKWRPLYNSTYTNNAGKIGEKSTRKLST-----KTLADVVESLIGVAIIDGGEN 1145
>gi|452988240|gb|EME87995.1| hypothetical protein MYCFIDRAFT_104430, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1360
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 189/665 (28%), Positives = 299/665 (44%), Gaps = 81/665 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ + ++++NIIV + TG GKTHIA+ I L R + + FL P+ L +
Sbjct: 4 RSYQTEMLEASVQKNIIVAMDTGSGKTHIALARIR--VELERNDK--LVWFLTPSKTLAE 59
Query: 120 QQAKVIEESI-GFKVRTFCGGSKRLKSHCD-------WEKEIDQYEVLVMIPQILLYCLY 171
QQ +V+ + G+ R G CD W + ++V P ILL L
Sbjct: 60 QQHQVLSAELSGYGTRLLTGADA-----CDKWSDQGLWTAALTNVRLVVATPAILLDALT 114
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGK 228
H F+ M +AL +FDE HH K HP IM+ FY+P + VP I G++ASP + +
Sbjct: 115 HAFMHMTRLALCVFDEAHHCTKK--HPMNSIMQLFYRPARERGESVPHILGLSASPHLPE 172
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY----GPVINDTSSS 284
A+A ++ ++I S NL V + +L++FV P V+ Y G + S+
Sbjct: 173 AAAAD-HVRRTIES--NLNAITVTPKQHRRELDTFVHPPDVQNIVYTAPSGGALPGRLST 229
Query: 285 YVTCSEQLAEIKREQYISAL-------SRKLHDHQSLRNTT---KQLNRLHDSMKFCLEN 334
+ + ++ + Y+ L SRK ++ T QL L F LE
Sbjct: 230 ALAYLTRTYDLSTDPYVLELTEQDDERSRKQLQKTMMKRKTYCLDQLRALDIRAGFLLEQ 289
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
LG A A + + + R L+ +E + D + + +F I D
Sbjct: 290 LG---ASMADWYVAACIRRFRAGLM-SECIVLPDLSEKERQHLARIFDRIRELAPATPDT 345
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA-SW 453
+ ++ + + +LL L+ ++ I+FV + V AL+ L+ L L +
Sbjct: 346 NGSDITAK---ATELLELL----LKHADPSLRGIIFVEQRVLVTALAEWLRGLPQLNDQY 398
Query: 454 RCHFLVGVN---------AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ VG + A L ++ A LE FR GE NL+VAT V EEG+DI C
Sbjct: 399 QIAAFVGTSTSTNRKISVADLVTLQDQARD--LEAFRRGEKNLMVATNVLEEGIDISACN 456
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQREL-----DLIKNFSKEEDR 556
LVI FD P+ + SF+Q RGRAR S+Y D G ++ +K ++ R
Sbjct: 457 LVICFDPPQNLVSFVQRRGRARQQHSKYFIFTKANDIGKAKQPWTLLEAAMKELYSDDTR 516
Query: 557 MNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDE--FFNPKPK 614
E ++ D E RIY+V S+ A ++ S L+ +CS + + + +P+
Sbjct: 517 QVCEALESHDLD----KESRIYQVQSTQALLTLDNAKSHLYHFCSVCISNAAGYVDLRPE 572
Query: 615 FYYFDDLGGTICHIILPANAPIHQIVGTPQSS-----MEAAKKDACLKAIEDLHKLGALN 669
F D + + A +H + + +S+ E A KDA +A LH+ G +N
Sbjct: 573 FDTSQDQETHLWTATVDLPAFVHPDLRSARSAESWSREELAIKDAAFEAYVALHQAGLIN 632
Query: 670 DYLLP 674
D LLP
Sbjct: 633 DNLLP 637
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 173/408 (42%), Gaps = 72/408 (17%)
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+ +PS++HRL+ L A L+ + + + + ++L AL + E RLE LG
Sbjct: 879 AFVPSMLHRLDLALTAAILQ---AGTLGDIDVKNTTLILDALCSPSAGEPADYNRLEYLG 935
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D LK+ + H EG LT +R V NS L K A + L +I +PF ++
Sbjct: 936 DQILKHCAEVQVMAQHLKRPEGSLTLQRDKIVRNSTLAKAALQAGLDEFIITKPFTGAKW 995
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
R P S+ G + C K + KT+ADVVE+LVGA
Sbjct: 996 -----RPPSF----------SKTSG---------LDCGKRE--ISTKTLADVVESLVGAA 1029
Query: 1167 IDDSGFKAATAFLK-WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLH 1225
D G +K + ++ N+ +S P ++ ++ LE ++GH+F H
Sbjct: 1030 YLDGGLAKGLQCIKILLPNEIWHPLPHCFNLLLSDLG--PAASHDGLSFLERMIGHEFEH 1087
Query: 1226 RGLLLQAFVHPSFNRLGG-CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
+ LL+QA H + G Y+RLEFLGD+VLD +IT +L++ L+ +L LV
Sbjct: 1088 KQLLMQAITHVTCPYKGQLSYERLEFLGDSVLDLVITPHLFAHKRLLRHWELHQAHEALV 1147
Query: 1285 NNQAFA----NVAVDQS----------------------FYKFLIFDSNV--LSETINNY 1316
N N A++Q Y FL DS + T
Sbjct: 1148 NKYFLGYCCMNYAIEQDENDIVAVADGSYRAMPKLRKVHLYDFLRADSQTAQMRRTAVAK 1207
Query: 1317 VDYMITPSSTREVKEGPRC----------PKVLGDLVESSLGAILLDS 1354
D M+ P ++ G PK D++ES LGA+ +DS
Sbjct: 1208 FDAMV-PEIAERLQGGTEYPWPELVTLSPPKFFSDIIESVLGALYIDS 1254
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
L+L A PS Y RLE+LGD +L + + + + K G LT R +V N
Sbjct: 912 LILDALCSPSAGEPAD-YNRLEYLGDQILKHCAEVQVMAQHLKRPEGSLTLQRDKIVRNS 970
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSL 1347
A A+ +F+I T + + +S + + K L D+VES +
Sbjct: 971 TLAKAALQAGLDEFIITKPF----TGAKWRPPSFSKTSGLDCGKREISTKTLADVVESLV 1026
Query: 1348 GAILLDSGF 1356
GA LD G
Sbjct: 1027 GAAYLDGGL 1035
>gi|347835506|emb|CCD50078.1| similar to dicer-like protein 2 [Botryotinia fuckeliana]
Length = 1378
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 296/656 (45%), Gaps = 99/656 (15%)
Query: 77 VYLGTGCGKTHI----AVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIE---ESI 129
V+L C I AVL I LA L R I FLAPTVAL Q + ++ S+
Sbjct: 6 VFLPKACYNLTIRSFRAVLRI--LAELERMKPGKIIWFLAPTVALCAQHHEYLQLNIPSV 63
Query: 130 GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECH 189
K+ G R W+ + +V+V Q+LL L H F++M ++L+IFDE H
Sbjct: 64 LIKMLIGADGVDRWTEQRQWDTVLKDVKVVVSSYQVLLDALTHGFVRMGRLSLIIFDEAH 123
Query: 190 HAQVKSNHPYAKIMKDFYKP--DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLL 247
+ K+ P AKIMK FY P I +P I G++ASPV+ P+S++ +E L
Sbjct: 124 NCVNKA--PGAKIMKSFYHPYKSIFPLPHILGLSASPVMRSS-------PQSLSDIEETL 174
Query: 248 DA-----KVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE---IKREQ 299
DA K++ DL V P++ + Y P N + V ++ + I +
Sbjct: 175 DAICCTPKIHRA----DLRLRVKLPLLSIIYYTPESNIIVTKTVASLRKIVQSLNIFEDP 230
Query: 300 YISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELI 359
Y+ L R + + ++L ++ S K ++ L S D+T NE+I
Sbjct: 231 YVLTLKRSDSE-----KSQRELAKVLKSFK-----------TYSQTQLKSIDKT-SNEII 273
Query: 360 EAE------GNTIDDSLCRF--ASQASEVF----AAICRRDGIASDLSCIEVLKEPF--- 404
E I + R+ A A + F + + IA L +E+
Sbjct: 274 LVELGPWAADYYISTVVTRYLKAMSAKDTFIVEDSPAAEKLYIAKALRQVEISPSTLSDT 333
Query: 405 --FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCHFLVGV 461
S K+ +L+GI++ + + I+FV T L+++L + ++ +VG
Sbjct: 334 GKISNKVEKLLGIIA--QQKPPFSAIIFVQERATVSVLAHLLSHHPLTKDRFKIGTMVGT 391
Query: 462 NAGLKSMSR-------NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
+ K + N K L F+ G++++L+AT V EEG+D+ C LVI F P
Sbjct: 392 SLNGKRTDQIGELVDVNQQKDTLSSFKRGKIDILIATNVLEEGIDVPACNLVICFSKPAN 451
Query: 515 VASFIQSRGRARMPQSEYAFLVDSG----NQRELD--LIKNFSKEEDRMNR----EIMDR 564
+ SF+Q RGRAR S+ L SG N EL+ + + + KE + E D
Sbjct: 452 LKSFVQRRGRARQQDSKLILLDASGDKATNWHELERKMREEYGKEMRELQHIYEIETADE 511
Query: 565 TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
S D +R+ +++S+GA + + L+ +CS L +F + +P F Y +LG
Sbjct: 512 QSED------DRVLRIESTGAQLDLDSALPHLYHFCSVLTTKDFVDLRPDFVYSSELGSE 565
Query: 625 ICH--IILPANAP----IHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ILP + +H+ G+ S AA KDA +A L++ G +ND LLP
Sbjct: 566 YVRAKVILPGSVSKPLRVHESRGSWLSERSAA-KDAAFEAYSALYRGGLVNDNLLP 620
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 218/524 (41%), Gaps = 94/524 (17%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEILG 1046
++PSI H +E LV LS + + E+S + L++ A+T + +RLE LG
Sbjct: 872 MIPSITHHIEVQLVV----DRLSRTILKDLEISDQSLIQTAITHASYSLDSNYQRLEFLG 927
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK L H EG L+ + V+NS + AA L YI + F ++
Sbjct: 928 DSILKLCTSVQLVAEHLDWHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKW 987
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
R ++ DDL V + + K ++DVVEAL+GA
Sbjct: 988 ----------------RPMYV-------DDL---VVTEQKTREMSSKILSDVVEALIGAC 1021
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
+ D G A L+ ++ + + + + ++ L + + +E +L + F +
Sbjct: 1022 MVDGGIPKALKSLQLFFPELNWLPLETRQMTLYQQAANDLHLPIALRPVEQILAYTFTKK 1081
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
LL++A HPS+ +RLEFLGD++LD +I + ++S L + LRS LVN
Sbjct: 1082 SLLVEAMTHPSYTSGTQSLERLEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNA 1141
Query: 1287 QAFA----NVAVDQSFYKFLIFDSNVLSETINNYVDYMIT---PSSTR------------ 1327
A +++DQ+ ++ + ET + +++ SS R
Sbjct: 1142 DFLAFLCMEMSIDQNVTNLTEGKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRH 1201
Query: 1328 ---------EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLNTVWKIM--- 1365
+ G P K D++ES LGA+ +DSG ++ +++
Sbjct: 1202 AELRDQILEAIYTGDTFPWALLSRLDARKFFSDMIESLLGAVWIDSG-SMEVCTQLIERM 1260
Query: 1366 --LSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD--- 1420
L ++ ILK ++P EL + +S ++ K GG +A D D
Sbjct: 1261 GVLRYMRRILKDGVRIMHPKEELGIVADSENVRYVLRREKMGG----DATEVNADADEEV 1316
Query: 1421 -------VFISA----CATNLSRKEAIRI-ASQQLFSKLKAAGY 1452
VF+ +RKE I+ A++Q LKA G+
Sbjct: 1317 RTEYRCTVFVGGEEIVEVRGGARKEEIQARAAEQAVRILKARGH 1360
>gi|339242189|ref|XP_003377020.1| putative ribosomal protein S7e [Trichinella spiralis]
gi|316974223|gb|EFV57735.1| putative ribosomal protein S7e [Trichinella spiralis]
Length = 2029
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 206/425 (48%), Gaps = 59/425 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT K Q+ F LE +E LGD+FLK+ V H+F+ +EG LT RS V+N+NL
Sbjct: 1543 VLRALTLRKAQDMFDLESMEALGDSFLKFIVSLHVFIKETNWNEGRLTSLRSEIVSNTNL 1602
Query: 1084 LKLAARNNLQVYIRDQPFDPCQ------FFALG------RRCPRICSKETERTIHSQYDG 1131
L + LQ + PFDP F +L + + + +
Sbjct: 1603 FNLGKQKLLQAKLTAVPFDPTAQWLPPCFRSLAALESGYESVNELIDEGDSKKKNEALKA 1662
Query: 1132 RAPDDLNAEVR---CS--KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV 1186
P + R CS + H ++ K+IAD VEALVG ++ ++G + A LKW GI +
Sbjct: 1663 NTPTPVVVAERYEMCSLNRTHQVIYDKSIADCVEALVGCYLLEAGMRPAIKLLKWFGIDI 1722
Query: 1187 E------------FEASQVTNICISSKSFLPLSASL-------DMATLEILLGHQFLHRG 1227
+ +S T C + + A + D+ + E +G++F ++
Sbjct: 1723 DGNLMNLLSSSSSSSSSSSTAFCSENCVLIGPEAKIHSIWTAYDLNSFEAKIGYRFTNKA 1782
Query: 1228 LLLQAFVHPSFNRL----GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
L+QA H S+N + Y+RLEFLGDA+LDYLI+ +LYS PG L+DLR+ L
Sbjct: 1783 YLIQALTHSSYNEVETPVTDSYERLEFLGDAILDYLISRHLYSSKRIRSPGLLSDLRAAL 1842
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD-YMI------TPSSTREVKEGPRCP 1336
VNN A S + + L E++N + + YM+ T E E P
Sbjct: 1843 VNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQDDDEKETSEFAEHVEVP 1902
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILK----FSNLQ-------LNPIR 1384
K LGD+ ES GAI LDS +L TVW++ + + + I K F++ ++P+R
Sbjct: 1903 KPLGDIFESVAGAIFLDSHCSLATVWQVYYNMIAEEIGKQRSDFTSFNKCLCHPPISPVR 1962
Query: 1385 ELLEL 1389
LLEL
Sbjct: 1963 HLLEL 1967
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 123/225 (54%), Gaps = 20/225 (8%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTV 115
R YQ EL + A +EN+IV LGTG GKT IAV+LI E++ + +P K +F+ V
Sbjct: 338 VRLYQKELLECAKKENVIVTLGTGTGKTFIAVMLIREMSESVHQPLKEGGKRSLFIVDKV 397
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHC----DWEKEIDQYEVLVMIPQILLYCLY 171
LV+QQA+ I + KV F G L C W + D++ VLVM +I L
Sbjct: 398 PLVKQQAEHIRINTNLKVGEFHGA---LGVDCWSAKIWMEFFDKFHVLVMTAEIFRNILT 454
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-----PDIMKVPRIFGMTASPVV 226
H FIK +++ L++FDECHHA HPY KIM + YK D PRI G+TAS +
Sbjct: 455 HGFIKFDIVNLIVFDECHHA--TKQHPYKKIM-ELYKLCYNNNDSGIQPRILGLTASVMN 511
Query: 227 GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRV 271
KG + L K+I +LE L ++V AE L+ + + P + +
Sbjct: 512 KKG--DEIGLQKAIRNLETTLCSRVVGTSHAELLKLYSADPHIAI 554
Score = 117 bits (293), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 150/603 (24%), Positives = 260/603 (43%), Gaps = 95/603 (15%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+ +L+ FR G+LNLL AT + EEG+D++ C VIRFD P T SF+QS+GRAR + Y
Sbjct: 792 EEVLKNFRHGKLNLLAATSILEEGIDVRHCNYVIRFDTPLTFRSFVQSKGRARQKIAYYT 851
Query: 534 FLVDSG---------------------NQRELDLI-------KNFSKEEDRMN--REIMD 563
LV N R+L+++ +++S D+++ R+ ++
Sbjct: 852 ILVQDRFLESFQEMLNSFVETEKFLKVNGRDLNILTRTKDRDRSYSGNNDQVDNCRKEVN 911
Query: 564 RTSSDAFTCSEERIYKVDSSG-----ACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
+ D + E + +G AC+ +++ RYC+KL D F + PKF
Sbjct: 912 LPNGDVDSLVEPYYTYFEENGLVKKAACLVLSSAHNVIKRYCNKLRKDRFADSSPKFSVQ 971
Query: 619 DDLG-----GTICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
L + + LP +P+ +I G P + + A+ A + + LH +G LN++L
Sbjct: 972 TILNKDLSISYVATVQLPTTSPLKKKIEGKPMQNAKLAEMAAAFETAKMLHAMGELNEFL 1031
Query: 673 LP-----QEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
+P +E EDE FS S SY + E+ + L A+ R Y + ++
Sbjct: 1032 IPPVTVRKEIELKEDE-QFFSISSRSYYLK----EVPDALYKAIPRADQKSYLYAISIS- 1085
Query: 728 YFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQ 787
F+P + + G + + ++ V++ S + I+ + F
Sbjct: 1086 SIESFLPRLGILVSKPIGNLPGFSVFTDESYIDVEIEFVEETSYSAHQL--DILTS--FH 1141
Query: 788 EMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVF 847
K L R E + F P +++ YL++P+ NS +C S
Sbjct: 1142 CCIFKNYLFREEEDFIFDP--------ENAACSYLIVPLKCEYNS-------KC--SVDL 1184
Query: 848 GTPGGSVDRKSLPSHGPLQLHNGW-SSESDVENSLVYATHKK-----WFYLVTNIVFEKN 901
T ++ SH P Q + + S N++VY +K ++Y VT +
Sbjct: 1185 STAEKIINWSKDVSHIPQQRSEKFIMNSSSYFNAVVYPWYKNKNDRDFYYFVTAVDNTCT 1244
Query: 902 GYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPL-FRLRNLLHNRKLEDSESHELE 960
SP+ S ++ + + + QPLL K + F+ NLL + + S L
Sbjct: 1245 PMSPFPLKMYRSFAEYFEVTKQVKVLDKNQPLLSVKMVSFKRLNLLCEKPI----SILLF 1300
Query: 961 EYFDD-------LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVA--IELKHLLSA 1011
++ DD L PEL + + S + L LP++++R+ +LL+A + L+ L A
Sbjct: 1301 DFDDDANSCHCKLVPELVIIHPMPAS--MWRCLIFLPTVLYRMNHLLIAEQLRLQILREA 1358
Query: 1012 SFP 1014
FP
Sbjct: 1359 MFP 1361
>gi|80979093|gb|ABB54749.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 244/1046 (23%), Positives = 437/1046 (41%), Gaps = 144/1046 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT 717
A + L+ LG LN+ +P+ T E + +D +E G+ V + +
Sbjct: 642 ACKVLYSLGELNERFVPK----TLKERVAAIADV-HFEHWNKYGDSVTATVNKADKSKYR 696
Query: 718 KSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG--EAEHLKVDLHLARG-----RS 770
+ L FY +P + Y + +F++ EH+ ++L R R+
Sbjct: 697 TYKTECPLEFY--DALPRVGEICY-AYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRN 753
Query: 771 VMTKLVPSGIMQAQ-----QFQEMFLKVILDRS---EFNSEFVPLGKDDYCE-------- 814
+ +L + Q + L+VI+ S E +F + D +
Sbjct: 754 KLPRLAEMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVL 813
Query: 815 --SSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQLH 868
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 814 DRRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP---- 867
Query: 869 NGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSYGI 924
D E +V YA + K LVT + E S K+ ++ + +S YG
Sbjct: 868 ------EDFEGKIVTQWYANYDKRM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGN 920
Query: 925 HLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSK 980
+ H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 921 RIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNFPG 976
Query: 981 DIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 977 DLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 209/470 (44%), Gaps = 106/470 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P ++ R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM------- 1212
+G + + G + A L++ I ++ +Q+ N+ + K + ++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINH 1426
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+ LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K
Sbjct: 1427 SYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1486
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------- 1320
+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1487 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNY 1546
Query: 1321 ---------ITPSS-------------------TREVKEG--PR----------CPKVLG 1340
+ P+ ++E ++G P+ PK LG
Sbjct: 1547 VRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALG 1606
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
D++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1607 DVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|336386278|gb|EGO27424.1| hypothetical protein SERLADRAFT_446652 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1267
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 280/1140 (24%), Positives = 463/1140 (40%), Gaps = 224/1140 (19%)
Query: 406 SKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSYILQN----LKFLASWRCHFLVG 460
+ K +L+ IL + + L + IV V + A A+ +L+N L FL +
Sbjct: 93 TPKFAKLVQILKSCQILGSDFRGIVIVQKRAVALAIVDLLRNSDNGLGFLRPY------- 145
Query: 461 VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
A + + KF G NLLV TK E+ LDI LVI++DL E+ S+I
Sbjct: 146 --ALISTSDFYHQDETCRKFSLGTHNLLVITKSNED-LDISASSLVIKYDLFESQLSYIY 202
Query: 521 S---RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS---- 573
+ GR A D ++R L + +FS+E +RTS + F
Sbjct: 203 AWCHTGRCHSYLVHMAEKGDETHRRILSELTSFSQE---------NRTSIEKFKEYRGRF 253
Query: 574 ------EERIYKVDS----------------SGACISAGYGVSLLHRYCSKL-----PHD 606
E+ I+ DS + I S ++R + + P D
Sbjct: 254 LLPHKLEDTIHSYDSQTEDEGEKSVSLKDPVTSNRICLRDATSTVYRLAAAMYDVEKPFD 313
Query: 607 -EFFNPKPKFYYFDDLGGTI--CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
E F + D+ G C+++LPA+ + G+ + A++ AC +L
Sbjct: 314 VELFRINK---HLDEQGSWTYSCNVMLPAHPTLRVFTGSSCPTPADARRSACYYTCTELF 370
Query: 664 KLGALNDYLLPQED----NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT-- 717
G L+ L PQ+ ED+ + + G+ + L+ PA S T
Sbjct: 371 NAGVLDYRLFPQQRLKPARFLEDDFEEPKKNMSNKNGQATPNHLYPRRKPAFWSNSLTAV 430
Query: 718 --KSQYPVRL---NFYFMQFIP------DPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
+ YPV + F Q+ P P R++ +F LF + LHLA
Sbjct: 431 FNDTLYPVMVALSGFSPDQYAPVLLLTRHPLPRMH-DFKLFFSGI--------SAPLHLA 481
Query: 767 RGRSVMTKLVPSGIMQAQQFQEMFLKVILDR------SEFNSEFVPLGKDDYCESSSSTF 820
G + ++ + + Q+ +++ ++ +E + PL D C +SS
Sbjct: 482 WGGPL--EVDQNQLALLHQYTLRICRIVANKPFACPLNEMAYFYAPLKSD--CTRTSSQV 537
Query: 821 YLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
+ + W+ +R ++S + TP W + D+ N
Sbjct: 538 QSKWNIPDFSEFICWESVR--IASRQWATPLN------------------WRNVEDLAND 577
Query: 881 LVYAT-HKKWF-----YLVTNIVFEKNGYSPYKDSDSSSHVDHLIS-----SYGIH-LKH 928
A +W Y V + + S DS + +L+ G+ L
Sbjct: 578 TADAVIQDRWVEFTRRYYVVKTRPDLSPMSKPADSPREAAYPNLLEYCKSRRKGLDCLVD 637
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSL 988
+QPL+ L N L + S + + L PELC K+ + + ++L L
Sbjct: 638 QEQPLIEVSKTPGLSNHLSPTFRPLTTSAKASAKY--LIPELCA-KLTIPASTLRTAL-L 693
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDA 1048
LPSI R++++L+ EL +A F ++ E+LL A++T + ERLE+LGDA
Sbjct: 694 LPSISRRIDDILIVKEL----NAKF-FNHHITEELLLAAISTPSAGFDYDYERLEVLGDA 748
Query: 1049 FLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF-----DP 1103
FLKY ++F+ + +EG L R ++N LLK A L +I+ +PF P
Sbjct: 749 FLKYLSSIYVFVTNPAKNEGALHVSRQQIISNKALLKTACTVGLPPFIQSRPFSYKVWQP 808
Query: 1104 CQFFALGRR---CPR--------------ICSKETE-------RTIHSQ--YDGRA-PDD 1136
F + R P + KETE + I S+ G+A P
Sbjct: 809 PNFSLVSIREDFTPNDDTKKISKAPSQSPLARKETEAIMEAPPKKIESEDSVKGKALPGS 868
Query: 1137 LNAEVRCSKGHH------WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVE 1187
+ + ++G WL K IADVVEA++GA G A K + I +E
Sbjct: 869 HASSKKENRGQQDTQYTQWLGDKAIADVVEAIIGAAYISGGRDLALTTAKTLDIPIRNIE 928
Query: 1188 FEASQVTNICISSKSFLP---LSASL---DMATLEILLGHQFLHRGLLLQAFVHPSFNRL 1241
A K+ P ++A L + +E ++GH+F + LL QA H S
Sbjct: 929 HWAD------FGRKALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLLAQALTHASVQGY 982
Query: 1242 -GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYK 1300
CY+RLEF+GDA+L++++ ++++ K+ PG LT ++ +V+N A A V V ++
Sbjct: 983 QSTCYERLEFIGDAILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGLHE 1042
Query: 1301 FLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSL 1347
++++S L+ I Y+D + T E + R PK L D+VES +
Sbjct: 1043 HILYESFPLAGNIQGYIDEL-KKKQTEEYELAAREQRTPGQFWLDVEPPKALSDVVESII 1101
Query: 1348 GAILLDSGFN-------LNTVWKIMLSFLDPILKFSNLQLNPIRELLEL-----CNSYDL 1395
GAI + GF N + K F + + L +P + +LEL C S+++
Sbjct: 1102 GAIYISDGFQPIGSELVFNNILK---PFYNKHITLKTLSHHPTKVILELLEAHGCQSFEI 1158
>gi|80979095|gb|ABB54750.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 241/1047 (23%), Positives = 431/1047 (41%), Gaps = 146/1047 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 642 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 701
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 702 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 759
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 760 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 815
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQL 867
S YL++P+I + DW+++ P P R+ P+ P
Sbjct: 816 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQ-SHPSNVQQREQQPAPRP--- 867
Query: 868 HNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSYG 923
D E +V YA + K LVT + E S K+ ++ + +S YG
Sbjct: 868 -------EDFEGKIVTQWYANYDKPM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYG 919
Query: 924 IHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFS 979
+ H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 920 NRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNFP 975
Query: 980 KDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 976 GDLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 210/473 (44%), Gaps = 112/473 (23%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P ++ R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDMAT----- 1214
+G + + G + A L++ I ++ +Q+ N+ + K + A+++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKK---MRANVNTTEIDGFL 1423
Query: 1215 -----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++
Sbjct: 1424 INHFYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFEN 1483
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM------- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1484 NTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRV 1543
Query: 1321 ------------ITPSS-------------------TREVKEG--PR----------CPK 1337
+ P+ ++E ++G P+ PK
Sbjct: 1544 TNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPK 1603
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
LGD++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1604 ALGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
Gv29-8]
Length = 1373
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 167/608 (27%), Positives = 267/608 (43%), Gaps = 75/608 (12%)
Query: 91 LLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDW 149
+L EL + + I FL VAL QQ V+ ++ F + F G + ++S W
Sbjct: 4 VLQTELENRAEGSEHKIAFFLVEKVALCFQQHAVLTTNLEFPIGKFFGEMTGVVRSQEYW 63
Query: 150 EKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP 209
+++ + V QILL L FI M I L++FDE HHA K +HPYA+I+KD Y
Sbjct: 64 DRQFAENMAFVCTAQILLDLLACGFISMGQINLMVFDEAHHA--KKSHPYARIIKDHYLR 121
Query: 210 DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVV 269
+ PRI GMTASPV + ++ + LE++L +K+ ++ D E+ + +P
Sbjct: 122 SRDERPRILGMTASPV----DALTKDVRYAAAELESMLCSKIATISD----EALMQNP-- 171
Query: 270 RVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK 329
E + + +SR + + R ++
Sbjct: 172 ------------------------EFSKTRLCDLISRCVRSNPQFRR----------HLE 197
Query: 330 FCLENLGVCGALHAS--YILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR 387
F + G A + LL+ D NE++ E T D+L S E AAI +
Sbjct: 198 FAASASSILGTWCADRYWQLLTTD----NEMLRIEARTGRDNLELDVSAGDEAMAAIAKV 253
Query: 388 DGIASD--LSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYIL 444
GI D I+ P S K+ L +L F +Q +CIVFV TA L+ +
Sbjct: 254 KGIIRDHVFGPIQA-GSPELSSKVKTLYEVLEDAFCKRQAKRCIVFVEARSTAFLLADLF 312
Query: 445 QNLKF-LASWRCHFLVGVNAGLKS---MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
Q + + +++G + S MS L+KFR GE N L AT V EEG+DI
Sbjct: 313 QQPGMEIPGMKAAYMIGSHTSTASAAYMSYRDQIMSLQKFRYGETNCLFATSVAEEGIDI 372
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM--- 557
C ++IRFDL + +IQS+GRAR S Y +++ GN + ++ +++ +
Sbjct: 373 PECDVIIRFDLYTSAIQYIQSKGRARQKSSLYVSMMEEGNLEHMRKLRRATRDAHALRQF 432
Query: 558 ------NREIMDRTSSDAFTCSEERI----YKVDSSGACISAGYGVSLLHRYCSKLPHDE 607
+R++ D ++E++ Y V +GA ++ + +L +Y S P++
Sbjct: 433 CSALPEDRKVPDFVIGPDVLAAQEQVTQKRYTVAGTGAQLTFITSLEVLAKYASSFPNNA 492
Query: 608 FFNPKPKFYYFDDLGGT-ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLG 666
P Y +G + +ILP +PI G Q S + A+ A +A L
Sbjct: 493 IDGLLPLEYIVTSIGKKFVARVILPDASPIKMFPGEVQKSKQLARCSAAFEACVHLIGKK 552
Query: 667 ALNDYLLP 674
+N L P
Sbjct: 553 YINGNLQP 560
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 196/480 (40%), Gaps = 99/480 (20%)
Query: 959 LEEYF-DDLPPELC-----QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
L+E+F DD C L++ D+ S +LP +++R++++L+A+E L +
Sbjct: 821 LDEFFVDDECDGTCYVILEPLRVSPIPVDVVSIALVLPVVIYRVDSVLIALETCSLFDLA 880
Query: 1013 FPEGAEVSAEMLLKALT-----TEKCQER---------FSLERLEILGDAFLKYAVGRHL 1058
+ +++ L+A+T TE+ E + ERLE LGD FLK A +
Sbjct: 881 ------ICSDLALEAVTKDSFNTEEHGEHQIDFQPGMGKNYERLEFLGDTFLKMATTISV 934
Query: 1059 FLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICS 1118
+ + DE R + N NL + A + YIR + FD ++ R +
Sbjct: 935 YTIAPDADEFHYHVGRMMMLCNKNLFEHAVEKGMPAYIRTKAFDRRTWYPSNMTLKRGKA 994
Query: 1119 KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID-------DSG 1171
TE H L K+IADV EAL+GA D
Sbjct: 995 ARTETK-----------------------HCLSHKSIADVCEALIGAAYMTSTTENMDMA 1031
Query: 1172 FKAATAF--------LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQF 1223
KA TA L++ F+ + +S+ L + ++ G++F
Sbjct: 1032 VKAVTAMVCSEHHTMLEYKDYFATFQVPKWHGNHVSAAQRLTVDKVAEIT------GYRF 1085
Query: 1224 LHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
L AF HPS F YQ+LEFLGD +LD + +L+ +P+ P LT+ ++
Sbjct: 1086 QCAPLARSAFRHPSYVFETNIPDYQQLEFLGDGLLDMAVVDFLFKRFPEADPKWLTEHKT 1145
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--------------------- 1320
+V+NQ + V +K ++ ++ L I Y +
Sbjct: 1146 AMVSNQFLGCLCVKLGLHKHILLATSALLGDIGRYATQLEQAEEIARQKSQGGDLGYTSG 1205
Query: 1321 ------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
P+ E P+ PK L D+VE+ +GA+ +DSG++ + V F+ P +
Sbjct: 1206 GCFQAGAQPTPQDFWIEVPQPPKALADVVEALVGAMFVDSGYSFSVVLNFFTKFIQPFFE 1265
>gi|195425457|ref|XP_002061021.1| GK10670 [Drosophila willistoni]
gi|194157106|gb|EDW72007.1| GK10670 [Drosophila willistoni]
Length = 1720
Score = 180 bits (457), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 261/583 (44%), Gaps = 114/583 (19%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSL-SLLPSIMHRLENLLVAIELKHLLSA 1011
D E +E++ + ++ + I ++ SL +LLP+ N + +E +L
Sbjct: 1131 DKIEEEDKEFWMETQFKMSKGNIYDYNTTANESLPALLPN-----SNPITPVEQLSVLQK 1185
Query: 1012 SFPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
+ AE L A+T+ C + F +ERLE+LGD+FLK + +L +H +EG
Sbjct: 1186 TISNEHITPAEQSEFLTAITSSGCSDVFDMERLELLGDSFLKMSATLYLSSIHSNWNEGV 1245
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP-------------------------- 1103
LT+ +S V+N NLL ++ I F P
Sbjct: 1246 LTQIKSTLVSNRNLLYCMNETDIPSRINSTLFTPKYTWKPPGLSLPHNILNLWQEQPEVA 1305
Query: 1104 --------C-------QFFALGRRCPRICSKETER-TIHSQYDGRAPDDLNAEVRCSKGH 1147
C + F+LG+ P K E ++ Y D +E+ G
Sbjct: 1306 KFVLPRNLCALQLTEEEIFSLGKLTPANFEKFLESCQANTNY---TSTDYESEMNFCIGK 1362
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI--QVEF--EASQVTNICISSKSF 1203
L K +AD +EAL+G + + G + L++ GI QV+ SQ+ ++ + S
Sbjct: 1363 SKLSNKVVADTLEALLGVIVKNYGVQHGFRILEYFGICKQVDIGKPLSQLLDLQLGSTRT 1422
Query: 1204 L----PLSAS---LDMATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDA 1254
P ++ LE LG+ F R LLQA HPS NRL GCYQ LEF+GDA
Sbjct: 1423 RADRDPREIDGLLINYHYLERNLGYTFKDRAYLLQALTHPSNPTNRLTGCYQELEFIGDA 1482
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
+LD+LI++Y++ ++ PGQLTDLRS LVNN A + V F+ F++ ++ +L+E+IN
Sbjct: 1483 ILDFLISAYIFERNIRMNPGQLTDLRSALVNNTTLACICVRHRFHLFILAENTLLTESIN 1542
Query: 1315 NYVDY----------------------------------MITPSSTRE---------VKE 1331
++VD+ M ST + + E
Sbjct: 1543 SFVDFQEKHMHRVTHHVRILLEENDIQCHNPLDEEDELEMADNLSTNDEPLAKGNLNMSE 1602
Query: 1332 GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFS-NLQLNPIRELLEL 1389
PK LGD+VE+ + A+ LD +L W+++ +P +++FS N+ +NP+R+L E
Sbjct: 1603 NVDVPKALGDVVEALIAAVYLDCK-DLQKTWEVVYRLFEPELIEFSRNVPINPLRQLNE- 1660
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSR 1432
+ + P++ GK + T +K + + TN S+
Sbjct: 1661 -HRLAKPIFSPAIMDEGKVMVSCLFTCNEKTIKVYGFGTNNSQ 1702
Score = 157 bits (398), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 174/680 (25%), Positives = 296/680 (43%), Gaps = 75/680 (11%)
Query: 55 PKQI-ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIF 110
PK++ R YQ L E N IVYL TG GKT +A+L + + K + IF
Sbjct: 5 PKEMQVRSYQSRLVDYLTERNGIVYLPTGAGKTFVAILTLKRFSLDFDKTIEDGGKRAIF 64
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYC 169
+ TV L +QQA FKV + G + S W+ EI + +VLV Q++L
Sbjct: 65 MCNTVELARQQALACRSLTNFKVGFYVGDQGVDEWSRSKWDVEIREKQVLVGTAQVMLDL 124
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVG 227
+ H + + ++++I DECHH HP+ + M+ F +P++ ++PR+ G+T + G
Sbjct: 125 MLHAHLSLGSVSIVIIDECHHG--TGRHPFREFMRLFLHVRPNV-QLPRVVGLTGVLIKG 181
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
+ N+ K + +LE + +V D +++E+ V +Y P Y T
Sbjct: 182 NEIN---NVKKMLKNLETTYHGNIITVSDMKEMEN------VMLYSTKPKEFFLLYGYGT 232
Query: 288 CSEQLAEIKREQYISALSRKLHDH-------------QSLRNTTKQ--LNRLHDSMKFCL 332
+L + + YI A +KL ++ Q R K+ L + + L
Sbjct: 233 HKFELIDTIK-YYIEAFHKKLDNYDIGKQPVRFSNGLQQQREPNKKNFAKSLLNDFIYQL 291
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E G+ A A LL E + + +I + R D
Sbjct: 292 EEYGIYVASIAVVALLVEFEIKKRQAETLVLRSIYRMAISLCDNIRHFLVSKLREDIDDD 351
Query: 393 DLSCIEVLKEP---FFSKKLLRLIGIL-STF--RLQQHMKCIVFVNRIVTARALSYILQN 446
+E F + ++ R + L TF + + + C+VFV R T +++ +L
Sbjct: 352 MSDDNVDTEENIYNFSTPRVQRFLHYLKQTFSNKNPKDICCLVFVERRYTCKSIYGML-- 409
Query: 447 LKFLAS-------WRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGE 495
LK++AS F+VG N ++ + R S +++FR GE NL++ + V E
Sbjct: 410 LKYIASVPELKNVLVPQFMVGRNGINQNFDTVLERKWQNSAIQQFRDGEANLMICSSVLE 469
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV-DSGNQRELDLIKNFSKEE 554
EG+D+Q C VI D +T S++Q++GRAR + + L +S + I ++
Sbjct: 470 EGIDVQACNYVIILDPLKTFNSYVQTKGRARSKDAVFLILASESEKPKTAKRIMDYQNAH 529
Query: 555 DRMNREIMDRTSSDAFTCSEE--RIYK------VDSSGACISAGYGVSLLHRYCSKLPHD 606
+ + DR A +E ++ ++ +G+ + A ++LLHRYC LP D
Sbjct: 530 RDIANYLQDRVLERAEPKMDEINEHFRDIIPPYINETGSLLLASSALALLHRYCQTLPSD 589
Query: 607 EF---------FNPKPKFYYFDDLGGT--ICHIILPANAPIHQIVGTP-QSSMEAAKKDA 654
F NP + +F T + I LP + + + + + ++AK A
Sbjct: 590 AFGFNMPWYKLLNPDERVQHFGKSAETKQVVSINLPLSTKLRSTIYSDLMNCNKSAKISA 649
Query: 655 CLKAIEDLHKLGALNDYLLP 674
++L+KLG LN LP
Sbjct: 650 AFNVCKELYKLGELNQKFLP 669
>gi|80979089|gb|ABB54747.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 242/1048 (23%), Positives = 434/1048 (41%), Gaps = 148/1048 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 642 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 701
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 702 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 759
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 760 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 815
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQ 866
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 816 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP-- 867
Query: 867 LHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSY 922
D E +V YA + K LVT + E S K+ ++ + +S Y
Sbjct: 868 --------EDFEGKIVTQWYANYDKRM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKY 918
Query: 923 GIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
G + H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 919 GNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNF 974
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 975 PGDLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 209/470 (44%), Gaps = 106/470 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P ++ R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDVNYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM------- 1212
+G + + G + A L++ I ++ +Q+ N+ + K + ++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINH 1426
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+ LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K
Sbjct: 1427 SYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1486
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------- 1320
+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1487 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNY 1546
Query: 1321 ---------ITPSS-------------------TREVKEG--PR----------CPKVLG 1340
+ P+ ++E ++G P+ PK LG
Sbjct: 1547 VRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALG 1606
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
D++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1607 DVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|242008637|ref|XP_002425109.1| dicer-1, putative [Pediculus humanus corporis]
gi|212508774|gb|EEB12371.1| dicer-1, putative [Pediculus humanus corporis]
Length = 471
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 207/465 (44%), Gaps = 65/465 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
E L+ILGD+FLK++ LF + ++ EG LT + V N NLL NL +I
Sbjct: 9 ENLKILGDSFLKFSCSFFLFKTYPSLHEGILTNVKGKLVGNKNLLDCGVAKNLPNFINTN 68
Query: 1100 PFDP---------------CQFFALGRRCPRICSKE------------TERTIHSQ---Y 1129
F P + P I S+ +E TI S
Sbjct: 69 DFSPNFDWNPPLFSTPEVLLNYIVSKNMDPSIISRLEIPQKECLTGILSEETIESNRKLI 128
Query: 1130 DGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
D L + KTI+DVVEAL+G ++ + G L W GI E
Sbjct: 129 DEEGVKKLGLVKSPFLNTELMSDKTISDVVEALIGVYLLNGGLAGGFKILNWFGILPESN 188
Query: 1190 AS---------QVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF-- 1238
+ +V ++ + + + + LE LG+ F + LLL+A HPS+
Sbjct: 189 GTYEEIMKKPVRVNDVNDEESAVMTILGDVFYTDLEETLGYTFKRKELLLEAITHPSYVR 248
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
NRL CYQRLEFLGDA+LD+L+T Y+ + + PG +TD+RS LVNN A ++V F
Sbjct: 249 NRLTPCYQRLEFLGDAILDFLVTVYIQENFKDMNPGLITDIRSALVNNSTLACLSVKYDF 308
Query: 1299 YKFLIFDSNVLSETINNYVDYMITPSSTRE-------------VKEGPRCPKVLGDLVES 1345
+K+L++ S+ L++ I N+V I+ + + E PK LGD+ ES
Sbjct: 309 HKYLLYTSSPLNKCIENFVKIQISNNHAVNEQALITLEENDAIMAESVTVPKALGDIFES 368
Query: 1346 SLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNP----IRELLELCNSYDLDLQFPS 1401
GAI +DS +L TVW + + + +NP +R L E+C F +
Sbjct: 369 LAGAIFIDSENSLETVWNVFYKIMKK--ELDEFTVNPPKTAVRVLHEICGEKPF---FET 423
Query: 1402 LKKGGKFLAEAKVTGKDKDVFISACATNL--SRKEAIRIASQQLF 1444
+ + KD+++ N ++K A ++A +Q+F
Sbjct: 424 TVYEKVVSVKCSIYYKDEEIVAHGFGDNKKDAKKSACKMALKQIF 468
Score = 40.8 bits (94), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
Y+ L+ LGD+ L + + +L+ YP L G LT+++ LV N+ + V ++ F+
Sbjct: 8 YENLKILGDSFLKFSCSFFLFKTYPSLHEGILTNVKGKLVGNKNLLDCGVAKNLPNFI 65
>gi|80979099|gb|ABB54752.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 242/1048 (23%), Positives = 434/1048 (41%), Gaps = 148/1048 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 642 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 701
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 702 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 759
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 760 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 815
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQ 866
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 816 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP-- 867
Query: 867 LHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSY 922
D E +V YA + K LVT + E S K+ ++ + +S Y
Sbjct: 868 --------EDFEGKIVTQWYANYDKRM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKY 918
Query: 923 GIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
G + H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 919 GNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNF 974
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 975 PGDLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 209/470 (44%), Gaps = 106/470 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P ++ R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM------- 1212
+G + + G + A L++ I ++ +Q+ N+ + K + ++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINH 1426
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+ LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K
Sbjct: 1427 SYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1486
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------- 1320
+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1487 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNY 1546
Query: 1321 ---------ITPSS-------------------TREVKEG--PR----------CPKVLG 1340
+ P+ ++E ++G P+ PK LG
Sbjct: 1547 VRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALG 1606
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
D++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1607 DVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|22026807|ref|NP_523778.2| Dicer-2 [Drosophila melanogaster]
gi|21627058|gb|AAF57830.2| Dicer-2 [Drosophila melanogaster]
gi|342672109|gb|AEL30809.1| FI15132p1 [Drosophila melanogaster]
Length = 1722
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 242/1048 (23%), Positives = 434/1048 (41%), Gaps = 148/1048 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 9 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 68
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 69 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 128
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 129 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 183
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 184 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 237
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 238 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 297
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 298 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 356
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 357 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 412
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 413 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 472
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 473 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 532
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 533 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 588
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 589 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 648
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 649 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 708
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 709 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 766
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 767 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 822
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQ 866
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 823 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP-- 874
Query: 867 LHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSY 922
D E +V YA + K LVT + E S K+ ++ + +S Y
Sbjct: 875 --------EDFEGKIVTQWYANYDKPM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKY 925
Query: 923 GIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
G + H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 926 GNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNF 981
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 982 PGDLWLKLIFLPSILNRMYFLLHAEALR 1009
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 210/473 (44%), Gaps = 112/473 (23%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1194 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1253
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P +I R +
Sbjct: 1254 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALG 1313
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1314 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1373
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDMAT----- 1214
+G + + G + A L++ I ++ +Q+ N+ + K + A+++
Sbjct: 1374 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKK---MRANVNTTEIDGFL 1430
Query: 1215 -----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++
Sbjct: 1431 INHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFEN 1490
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM------- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1491 NTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRV 1550
Query: 1321 ------------ITPSS-------------------TREVKEG--PR----------CPK 1337
+ P+ ++E ++G P+ PK
Sbjct: 1551 TNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPK 1610
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
LGD++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1611 ALGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1662
>gi|80979097|gb|ABB54751.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 180 bits (456), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 242/1048 (23%), Positives = 434/1048 (41%), Gaps = 148/1048 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 642 ACKVLYSLGELNERFVPKTLKERVAAIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 701
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 702 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 759
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 760 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 815
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQ 866
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 816 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP-- 867
Query: 867 LHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSY 922
D E +V YA + K LVT + E S K+ ++ + +S Y
Sbjct: 868 --------EDFEGKIVTQWYANYDKRM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKY 918
Query: 923 GIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
G + H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 919 GNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNF 974
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 975 PGDLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 209/470 (44%), Gaps = 106/470 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P +I R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSAS-------LDM 1212
+G + + G + A L++ I ++ +Q+ N+ + K + ++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINH 1426
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+ LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K
Sbjct: 1427 SYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1486
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------- 1320
+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1487 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNY 1546
Query: 1321 ---------ITPSS-------------------TREVKEG--PR----------CPKVLG 1340
+ P+ ++E ++G P+ PK LG
Sbjct: 1547 VRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALG 1606
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
D++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1607 DVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|422398915|ref|NP_001116485.2| endoribonuclease Dicer-1 [Apis mellifera]
Length = 1952
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 225/476 (47%), Gaps = 109/476 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1416 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1475
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFF------------------------A 1108
N NL +L + L + + +P D PC + A
Sbjct: 1476 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSTLWNQADIPA 1535
Query: 1109 LGRRCPRICS---KETERTIH------SQYDGRAPDDLNAEVRCSKGH-----HWLHKKT 1154
L P + +ETE+ + + + P++L+ +RC + H + K+
Sbjct: 1536 LQAVNPFEITQLVRETEQKLGVMKNELDRNETTLPNNLD-NMRCFIPYNLITQHSIPDKS 1594
Query: 1155 IADVVEALVGAFIDDSGFKAA--------------------------------TAFLK-- 1180
IAD VEAL+GA++ G + A T F+K
Sbjct: 1595 IADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPKDRIPGSTPFVKGK 1654
Query: 1181 -------WIGI---QVEFEASQVTNICISSKSFLPLSASLD-MATLEILLGHQFLHRGLL 1229
W I ++E + + + + L L LD LE +G++F L
Sbjct: 1655 NEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLM--LDGYEELEKNIGYKFHDISYL 1712
Query: 1230 LQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
LQAF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1713 LQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGALTDLRSALVNNT 1772
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRC 1335
FA++AV F+K+ S LS IN +V +Y + E E
Sbjct: 1773 IFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEV 1832
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
PK LGD+ ES GAI LDSG +L+ VW + + + + I +FS N+ +PIRELLEL
Sbjct: 1833 PKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLEL 1888
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFL-----VGVNAGLKSMSRN------AMKSI 476
++FV++ A+ L Y+L + + HFL + N S S++ + +
Sbjct: 440 VIFVDKAFVAKVLFYLLNEIS-MHDEELHFLSPLYTIEKNIDDISYSKDLEIEHRKQEEV 498
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L++FR E N+L++T + EEG+DI C V+R+D P+T S++Q + RAR P + Y LV
Sbjct: 499 LKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAPDALYVLLV 558
Query: 537 DSGNQRE--LDLIKNFSKEEDRMNR------EIMDRTSSDAFTCSEERIYKVDSSGAC-I 587
+E L + E+ + + + +D + +D A +
Sbjct: 559 SQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHYKPLDGGDAPKV 618
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPANAPIHQIVGT- 642
+ +SL++RYC+KLP D F P++ D++ IC + LP N+P+ IV +
Sbjct: 619 TFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNIDNILMYICSLRLPINSPVKYIVSSY 678
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
P + A++ A L+ DLH+ ++D LLP
Sbjct: 679 PMPNKAMARRMAALQLCIDLHRKNEIDDNLLP 710
>gi|80979091|gb|ABB54748.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 244/1049 (23%), Positives = 435/1049 (41%), Gaps = 150/1049 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 642 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 701
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 702 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 759
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 760 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 815
Query: 811 DYCESSSSTFYLLLPVIF----HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPL 865
S YL++P+I HK DW+++ P + G +V R+ P+ P
Sbjct: 816 ----RSKENSYLVVPLILGAGEHK-CFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP- 867
Query: 866 QLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISS 921
D E +V YA + K LVT + E S K+ ++ + +S
Sbjct: 868 ---------EDFEGKIVTQWYANYDKRM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSK 917
Query: 922 YGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIG 977
YG + H + ++ + L +L +HNR +++S + L PELC
Sbjct: 918 YGNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFN 973
Query: 978 FSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI++R+ LL A L+
Sbjct: 974 FPGDLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 209/470 (44%), Gaps = 106/470 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P ++ R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSAS-------LDM 1212
+G + + G + A L++ I ++ +Q+ N+ + K + ++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINH 1426
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+ LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K
Sbjct: 1427 SYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1486
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------- 1320
+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1487 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNY 1546
Query: 1321 ---------ITPSS-------------------TREVKEG--PR----------CPKVLG 1340
+ P+ ++E ++G P+ PK LG
Sbjct: 1547 VRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALG 1606
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
D++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1607 DVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|358396694|gb|EHK46075.1| hypothetical protein TRIATDRAFT_292263 [Trichoderma atroviride IMI
206040]
Length = 1456
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 282/640 (44%), Gaps = 86/640 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL-IRKPQKSI----CIFLAPT 114
R+YQ++L ++A EN IV L TG GKT IA LL+ + + I +K F+
Sbjct: 50 REYQIDLYERAKNENTIVVLDTGTGKTLIAALLLRRVLEVEIENREKGYTPKSAFFIVEK 109
Query: 115 VALVQQQAKVIEESIGFKV-RTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
VAL QQ V+ ++ F + + F + + W ++ + V Q LL
Sbjct: 110 VALCFQQYAVLTSNLEFPIGKIFGDMNGDIGDPEFWRQQFSENMAFVCTAQTLLSMFGAG 169
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
FI M+ + LL+FDE HH K NH YA+IM ++Y + PRI GMTASPV +++
Sbjct: 170 FISMDRVNLLVFDEAHH--TKKNHAYARIM-EYYPRWENERPRILGMTASPV----DTSK 222
Query: 234 ANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
++ + LE +L K+ ++ ED E ++ + + R P
Sbjct: 223 GDVRIAAMDLEEMLCGKIATISDEDPEHSKTNLWEEISRCIGRNP--------------- 267
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHAS--YILLS 349
Q+ + LS F E V G A + LL
Sbjct: 268 -------QFKAHLS------------------------FTKEASSVLGTWCADRYWQLL- 295
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPF--FSK 407
T +E+++ E T D+L + E AA+ R I D E + + S
Sbjct: 296 ---TTNDEMVKIEAKTGRDTLDLDVLDSDEAIAAVSRARDIIRDHQ-FEPITNNWSDLSP 351
Query: 408 KLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVNA-- 463
K+ L IL + F + +CIVFV + TA L+ + + + R +++G NA
Sbjct: 352 KVKTLHQILGNAFSQRLSKRCIVFVEQRTTAFLLADLFKQPGMSIPGMRTAYMIGSNATS 411
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
G +MS L+KF+ GE N L AT V EEG+D+ C +++RFDL + +IQS+G
Sbjct: 412 GAANMSLKDQVVSLQKFKRGEFNCLFATSVAEEGIDVPECDVIVRFDLCVSAIQYIQSKG 471
Query: 524 RARMPQSEYAFLVDSGN---QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKV 580
RAR Y LV+S N R+ K+ + E R R + + + F E +
Sbjct: 472 RARQSSFLYVTLVESKNIHHHRKFQQAKSAAFELQRFCRALPEDRKVEDFDVRPEVLQSC 531
Query: 581 DSSGACISAGYGVSL------LHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANA 634
++ A S G G+ L L +Y S L D K ++ D I ++LP +
Sbjct: 532 ETIIATESGG-GLKLVDSLACLAKYTSSLSRDGL--QKIEYVVKSDKKQFIASVVLPDGS 588
Query: 635 PIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
PI I G Q + + A+ A +A L + G ++ +L P
Sbjct: 589 PIKTIQGISQRTKQLARCSAAFEACRILIEKGYIDKHLRP 628
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 189/444 (42%), Gaps = 92/444 (20%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT-----TEKCQER------ 1036
LLP +M+R++++L+A E+ L+ + + E+ L+A+T TE+ E
Sbjct: 926 LLPVVMYRIDSVLIASEVCSLVDLA------IRPELALEAITKDSFNTEEHGEDQVDFQP 979
Query: 1037 ---FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
+ ERLE LGD FLK A ++ L+ +E E +R +NN NL A L
Sbjct: 980 GMGKNYERLEFLGDTFLKMATTISVYTLYPHENEFEYHVKRMLMLNNKNLFTHAIEKKLP 1039
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLN----AEVRCSKGHHW 1149
YIR + FD RT + P DL + H
Sbjct: 1040 GYIRTRAFD-------------------RRTWY-------PSDLRLKKGKATKAKARRHC 1073
Query: 1150 LHKKTIADVVEALVGAFI--------DDSGFKAATAFLKWIG-IQVEFEASQVTNICISS 1200
L K+IADV EAL+GA D KA TA + + F +
Sbjct: 1074 LSHKSIADVCEALIGAAYLTGKSNNSMDMAVKAVTAMVSSENHTMINFSDYRARYTTPEW 1133
Query: 1201 KSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVL 1256
++ P +A +M + ++G++F LL AF H S+ ++ YQ+LEFLGDA++
Sbjct: 1134 HTYEPNAAQRNMVERIAEIIGYRFQCAPLLRSAFKHSSYVYEEKIRRDYQQLEFLGDALI 1193
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D ++ +LY+ +P+ P LT+ + +V+NQ + V K L+ ++ L I Y
Sbjct: 1194 DMVVVDFLYTRFPEADPKWLTEHKMAMVSNQFLGFLCVKLGLSKHLMLATSSLHSLIREY 1253
Query: 1317 VDYMI----------------------------TPSSTREV-KEGPRCPKVLGDLVESSL 1347
PS T + E + PK L D+VE+ +
Sbjct: 1254 TAEAKEAEEKAKGCRKPHGNKAAAGSDKGASAEAPSVTLDFWAEIQQPPKALADVVEALV 1313
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDP 1371
GA+ +DSG++ + V F+ P
Sbjct: 1314 GAMFVDSGYSFSVVQDFFAKFIQP 1337
>gi|80979087|gb|ABB54746.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 242/1048 (23%), Positives = 434/1048 (41%), Gaps = 148/1048 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 642 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 701
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 702 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 759
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 760 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 815
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQ 866
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 816 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP-- 867
Query: 867 LHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSY 922
D E +V YA + K LVT + E S K+ ++ + +S Y
Sbjct: 868 --------EDFEGKIVTQWYANYDKPM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKY 918
Query: 923 GIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
G + H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 919 GNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNF 974
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 975 PGDLWLKLIFLPSILNRMYFLLHAEALR 1002
Score = 146 bits (369), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 210/473 (44%), Gaps = 112/473 (23%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P +I R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDMAT----- 1214
+G + + G + A L++ I ++ +Q+ N+ + K + A+++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKK---MRANVNTTEIDGFL 1423
Query: 1215 -----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++
Sbjct: 1424 INHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFEN 1483
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM------- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1484 NTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRV 1543
Query: 1321 ------------ITPSS-------------------TREVKEG--PR----------CPK 1337
+ P+ ++E ++G P+ PK
Sbjct: 1544 TNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPK 1603
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
LGD++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1604 ALGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|16215719|dbj|BAB69959.1| double-strand-specific ribonuclease [Drosophila melanogaster]
Length = 1722
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 242/1048 (23%), Positives = 433/1048 (41%), Gaps = 148/1048 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 9 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 68
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 69 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 128
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ + ++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 129 ALSSLGVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 183
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 184 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVLVSFPHQEQVLTVTRL 237
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 238 ISAEIEKFYVSLDLMNFGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 297
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 298 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 356
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 357 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 412
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 413 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 472
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 473 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 532
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 533 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 588
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 589 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 648
Query: 658 AIEDLHKLGALNDYLLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGE 702
A + L+ LG LN+ +P + N D + +D + + E
Sbjct: 649 ACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTE 708
Query: 703 LHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEA 756
A+ R Y + L F + + +Y R + + +++ LP A
Sbjct: 709 CPLEFYDALPRVGEICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLA 766
Query: 757 EHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
E + LH+ + + ++ + + QF M + IL + F L +
Sbjct: 767 EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR- 822
Query: 811 DYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQ 866
S YL++P+I + DW+++ P + G +V R+ P+ P
Sbjct: 823 ----RSKENSYLVVPLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP-- 874
Query: 867 LHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSY 922
D E +V YA + K LVT + E S K+ ++ + +S Y
Sbjct: 875 --------EDFEGKIVTQWYANYDKPM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKY 925
Query: 923 GIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGF 978
G + H + ++ + L +L +HNR +++S + L PELC F
Sbjct: 926 GNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNF 981
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELK 1006
D+ L LPSI++R+ LL A L+
Sbjct: 982 PGDLWLKLIFLPSILNRMYFLLHAEALR 1009
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 236/531 (44%), Gaps = 118/531 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1194 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1253
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL + P +I R +
Sbjct: 1254 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWQENPEFAKIIGPHNLRDLALG 1313
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1314 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTILNKVIADTLEAL 1373
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDMAT----- 1214
+G + + G + A L++ I ++ +Q+ N+ + K + A+++
Sbjct: 1374 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKK---MRANVNTTEIDGFL 1430
Query: 1215 -----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++
Sbjct: 1431 INHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFEN 1490
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM------- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1491 NTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRV 1550
Query: 1321 ------------ITPSS-------------------TREVKEG--PR----------CPK 1337
+ P+ ++E ++G P+ PK
Sbjct: 1551 TNYVRILLEEADVQPTPPDLDDELDMTELPHANKCISQEAEKGVPPKGEFSMSTNVDVPK 1610
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLELCNSYDL 1395
LGD++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E ++ +
Sbjct: 1611 ALGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVEHKHAKPV 1669
Query: 1396 DLQFPS-LKKGGKFLAEAKVTGKDKDVFISACATNLSRKE--AIRIASQQL 1443
F S + +GG + + T +K + + +N + + A + A QQL
Sbjct: 1670 ---FGSPIVEGGTVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1717
>gi|80979085|gb|ABB54745.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 166/678 (24%), Positives = 298/678 (43%), Gaps = 82/678 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + KP +S +F+ TV
Sbjct: 2 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + FKV + G + W EI + +VLV Q+ L + ++
Sbjct: 62 LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++++I DECHH +HP+ + M+ F + K+PR+ G+T + G + N
Sbjct: 122 ALSSLSVVIIDECHHG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---N 176
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQL 292
+ + LE + +V D +++E+ V +Y P +++ V +L
Sbjct: 177 VATKLKELEITYRGNIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRL 230
Query: 293 AEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGAL 341
+ E++ +L R+ Q LR+ +K+ + +L + + ++ G+ A
Sbjct: 231 ISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAAS 290
Query: 342 HASYILL-------SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
A L+ ET+ +L+ T+ + + Q + D + ++
Sbjct: 291 IAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE- 349
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQN 446
EV+ F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 350 ---EVIMN-FSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQST 405
Query: 447 LKFLASWRCHFLVGVN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N +S + R KS +++FR G NL++ + V EEG+D+Q
Sbjct: 406 PELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQA 465
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREI 561
C V D +T ++QS+GRAR ++++ F D ++ + I + K + + +
Sbjct: 466 CNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYL 525
Query: 562 MDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFF 609
DR +E +Y++ + +GA + +++LHRYC +P D F
Sbjct: 526 KDR----VLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFG 581
Query: 610 NPKPKFYYFDD-----------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLK 657
P F+ + G + I +P N + I P +++ AK A K
Sbjct: 582 FVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFK 641
Query: 658 AIEDLHKLGALNDYLLPQ 675
A + L+ LG LN+ +P+
Sbjct: 642 ACKVLYSLGELNERFVPK 659
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 209/470 (44%), Gaps = 106/470 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1187 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1246
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P ++ R +
Sbjct: 1247 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALG 1306
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1307 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1366
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM------- 1212
+G + + G + A L++ I ++ +Q+ N+ + K + ++
Sbjct: 1367 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINH 1426
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+ LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K
Sbjct: 1427 SYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1486
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---------- 1320
+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1487 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNY 1546
Query: 1321 ---------ITPSS-------------------TREVKEG--PR----------CPKVLG 1340
+ P+ ++E ++G P+ PK LG
Sbjct: 1547 VRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALG 1606
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
D++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1607 DVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1655
>gi|449532911|ref|XP_004173421.1| PREDICTED: endoribonuclease Dicer homolog 2-like, partial [Cucumis
sativus]
Length = 307
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 166/305 (54%), Gaps = 22/305 (7%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A+TT+KCQE+F+LE LE LGD+FLKYA G+HLF EG LT ++ V+N+ L
Sbjct: 1 VLEAITTKKCQEKFNLESLETLGDSFLKYATGQHLFRTFQNDHEGLLTLKKDRIVSNAAL 60
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
+ + + +IRD+ FDP + G H Y R +
Sbjct: 61 RRRGCEHKISGFIRDEAFDPQNWDIPG-------------DTHEVYQLREEVLFSGRKVY 107
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF 1203
+ + K IADVVEAL+GA++ G KAA FL IGI+V F + + F
Sbjct: 108 VQRKRKIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVNF------DFVPYERPF 161
Query: 1204 -LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLI 1260
+ + +++ LE LL + F R LLL+A H S+ + CYQRLEFLGD+VLDY I
Sbjct: 162 RVDVHKLINVGHLESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVLDYAI 221
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
T +LY+ YP + P LTD+RS V+N ++ A+ +K ++ S+ L + I++ V
Sbjct: 222 TVHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSHDLHKHISSAVQNF 281
Query: 1321 ITPSS 1325
T SS
Sbjct: 282 ETLSS 286
>gi|326485005|gb|EGE09015.1| dicer-like protein 2 [Trichophyton equinum CBS 127.97]
Length = 1417
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 184/693 (26%), Positives = 313/693 (45%), Gaps = 85/693 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAV------LLIYE----------LAH---- 98
+R YQ+E+ ++++NIIV + TG GKT ++V L Y+ + H
Sbjct: 57 SRGYQIEMLDASIKQNIIVAMDTGSGKTQMSVNYTHAETLSYDHLNNQASSNTVGHIYSA 116
Query: 99 -------LIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGS--KRLKSHCD 148
L R + FLAP V L +QQ + I + + ++ + G +R +
Sbjct: 117 ILRIRHELERCSNDKLVWFLAPKVPLAEQQYRAISQQLPAYQTKILTGADNLERWSTQKI 176
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK 208
W+ + ++V PQILL L + FI + IALL+FDE HH VK++ P KIMK+FY
Sbjct: 177 WDAFLLNTRIVVSTPQILLDVLSNGFITLRRIALLVFDEAHHC-VKAS-PENKIMKNFYH 234
Query: 209 PDIMKV------PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLES 262
I ++ P I G+TASP + + L +S +NL E++
Sbjct: 235 ARIDQLSETNDLPSILGLTASPTSKLTEDSLSLLMESRQLEQNLHACCKTPSFHREEMMQ 294
Query: 263 FVSSP-VVRV-YQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ 320
+V P ++++ YQ I +I+ + + + + ++ R + ++
Sbjct: 295 YVHIPELLKISYQKDSTIPHNMEMKFLSMLNDIDIESDPFF-----QRYKGKTDRKSIER 349
Query: 321 LNRLHDSMKFCLENLGVC--------GAL--HASYILLS----GDETMRNELIEAEGNTI 366
R D CL+ L C G L AS +S R +LI+ +
Sbjct: 350 FMRARDRKTPCLDQLKRCFTRVSHIYGELGHWASSTFISEIYRRTREKRAKLIDQSWSEW 409
Query: 367 DDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK 426
D F A + AI S + S+K+ L+ +L++ L +
Sbjct: 410 DRDDSSFLCNALKPVVAIIGERCWNSTPDAV--------SQKVEHLVDLLAS-ELTGTSR 460
Query: 427 CIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNA------GLKSMSRNA-MKSILEK 479
I+FV + TA LS+++ + LA + +G +A + +S+ MK+ ++
Sbjct: 461 GIIFVEQRATAVMLSHLISHYPELAHIMPDYFLGNSAFSDRKADITELSKPGDMKNSIDD 520
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV--- 536
+SG+ NLLVAT V EEG+D+ C LV+ FD P+ + SF+Q RGRAR S++
Sbjct: 521 LKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKQSSKFVIFYAED 580
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-YKVDSSGACISAGYGVSL 595
D+ ++ + +++ KE N+E +DR + E +++S+GA ++ S
Sbjct: 581 DTATHKDWEAMEDIMKERYFNNKEFIDRLREEDDEEDVEYESLRIESTGALLTLENARSH 640
Query: 596 LHRYCSKLPHDEFFNPKPKFYYFDD--LGGTICHIILPA--NAPIHQIVGTPQSSMEA-A 650
L +CS LP EF + +P F + ++LP + + G E A
Sbjct: 641 LSHFCSTLPC-EFTDTQPDFIISNSGIKDMLTAKVLLPTVLDLQFREFEGIQAWKREKMA 699
Query: 651 KKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
K+DA +A L+K G +ND+L+P+ T++E
Sbjct: 700 KRDAAFQAYLQLYKAGLVNDHLMPEHCRTTDEE 732
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 148/368 (40%), Gaps = 65/368 (17%)
Query: 1029 TTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAA 1088
++ +E + +RLE LGD+ LK L H EG L++++ + V+NS L K A
Sbjct: 971 SSTSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAV 1030
Query: 1089 RNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH 1148
L +I F ++ L Y+ D NA K
Sbjct: 1031 DTGLDQFILTTCFTGAKWRPL-------------------YNSTYAD--NAGKIGEKSTR 1069
Query: 1149 WLHKKTIADVVEALVGAFIDDSG----FKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
L KT+ADVVE+L+GA I D G + FL I Q E ++ + S+ F
Sbjct: 1070 ELSTKTLADVVESLIGAAIIDGGENKVLRCLELFLPEINWQPSGERIEI--LFDSAPDFN 1127
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYL 1264
M+ +E L+ + F + LL + HPS YQRLEFLGD++LD ++T L
Sbjct: 1128 DDCPRDIMSKIEPLIDYSFTKKALLATSLSHPSNLISRMTYQRLEFLGDSILDNIVTRAL 1187
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFA----NVAVD----------------------QSF 1298
+ ++ + +R+ LVN A N + D S
Sbjct: 1188 FRCKKEIPHQDMHLIRTALVNADFLAFLCMNTSTDVTREDVCVSPTGEVEVTSSTHQVSL 1247
Query: 1299 YKFLIFDSNVLSETINNYVDYM--ITPSSTREVKEGP----------RCPKVLGDLVESS 1346
++++ S + ET + + ++ G PK D++ES
Sbjct: 1248 WQYMSHSSTDIVETQQAIARTFEELRDQIEKALRSGASYPWTLLSTLNAPKFFSDIIESI 1307
Query: 1347 LGAILLDS 1354
LGAI +DS
Sbjct: 1308 LGAIFIDS 1315
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
YQRLEFLGD+ L + L + +P G L+ + +V+N AVD +F++
Sbjct: 981 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1040
Query: 1304 --FDSNVLSETINN-YVDYM--ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F N+ Y D I STRE+ K L D+VES +GA ++D G N
Sbjct: 1041 TCFTGAKWRPLYNSTYADNAGKIGEKSTRELST-----KTLADVVESLIGAAIIDGGEN 1094
>gi|356518185|ref|XP_003527762.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 455
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 144/242 (59%), Gaps = 4/242 (1%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM 1212
KTIAD VEAL+GA+ D G A+ +KW+GI VE E S + ++ + D+
Sbjct: 126 KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLDEAITAASLSTCVPIESDI 185
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
A+LE + ++F +GLLL+A H S LG CY+RL+FLGD+VLD LIT +LY +
Sbjct: 186 ASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLYQSHTD 245
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK 1330
+ PG L DLRS VNN FA VAV + ++ L+ S +L I YV +I+ S R +
Sbjct: 246 IDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILEYVK-VISESDPRSLP 304
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELC 1390
R PK LGD+VES +G IL+ + +L+ VW + L PI+ L+L P REL ELC
Sbjct: 305 -SIRAPKALGDVVESIVGPILIGTKLSLDQVWNVFYPLLSPIVTPDKLELPPFRELNELC 363
Query: 1391 NS 1392
+S
Sbjct: 364 DS 365
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERL+ LGD+ L + HL+ H +D G L RS +VNN N ++A R+NL ++
Sbjct: 221 ERLKFLGDSVLDLLITWHLYQSHTDIDPGVLADLRSASVNNDNFAQVAVRHNLHQHL 277
>gi|380025724|ref|XP_003696618.1| PREDICTED: endoribonuclease Dcr-1-like [Apis florea]
Length = 1966
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 249/550 (45%), Gaps = 122/550 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1417 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1476
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFF------------------------A 1108
N NL +L + L + + +P D PC + A
Sbjct: 1477 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSTLWNQADIPA 1536
Query: 1109 LGRRCPRICS---KETERTIH------SQYDGRAPDDLNAEVRCSKGH-----HWLHKKT 1154
L P + +ETE+ + + + P++L+ +RC + H + K+
Sbjct: 1537 LQAVNPFEITQLVRETEQKLGVMKNELDRNETTLPNNLD-NMRCFIPYNLITQHSIPDKS 1595
Query: 1155 IADVVEALVGAFIDDSG--------------------------------FKAATAFLK-- 1180
IAD VEAL+GA++ G +T ++K
Sbjct: 1596 IADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEISIIQETEPKDRIPGSTPYVKGK 1655
Query: 1181 -------WIGI---QVEFEASQVTNICISSKSFLPLSASLD-MATLEILLGHQFLHRGLL 1229
W I ++E + + + + L L LD LE +G++F L
Sbjct: 1656 NEKGQTIWTQIRYGKLEEPQNPLLRYIVDPEEELKLM--LDGYEELEKNIGYKFHDISYL 1713
Query: 1230 LQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
LQAF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1714 LQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSALVNNT 1773
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRC 1335
FA++AV F+K+ S LS IN +V +Y + E E
Sbjct: 1774 IFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEV 1833
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLELCNSY 1393
PK LGD+ ES GAI LDSG +L+ VW + + + + I +FS N+ +PIRELLEL
Sbjct: 1834 PKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKNEIEQFSTNVPKSPIRELLEL---- 1889
Query: 1394 DLDLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKA 1449
P K GK LA+ + DVF + R I A++ K+K
Sbjct: 1890 -----EPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKIKE 1944
Query: 1450 AGYVPKTKSL 1459
+ K K++
Sbjct: 1945 NAKLFKRKTM 1954
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 152/672 (22%), Positives = 276/672 (41%), Gaps = 113/672 (16%)
Query: 422 QQHMKCI---------VFVNRIVTARALSYILQNLKFLASWRCHFL-----VGVNAGLKS 467
Q+HM+ I +FV++ A+ L Y+L + + HFL + N S
Sbjct: 425 QRHMRGITDPDLLCGVIFVDKAFVAKVLFYLLNEIS-IHDEELHFLSPLYTIEKNIDDIS 483
Query: 468 MSRN------AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
S++ + +L++FR E N+L++T + EEG+DI C V+R+D P+T S++Q
Sbjct: 484 YSKDLEIEHRKQEEVLKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQC 543
Query: 522 RGRARMPQSEYAFLVDSGNQRE--LDLIKNFSKEEDRMNR------EIMDRTSSDAFTCS 573
+ RAR P + Y LV +E L + E+ + + + +D +
Sbjct: 544 KSRARAPDALYVLLVSQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAM 603
Query: 574 EERIYKVDSSGAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHI 628
+D A ++ +SL++RYC+KLP D F P++ D++ IC +
Sbjct: 604 IPHYKPLDGGDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNIDNILMYICSL 663
Query: 629 ILPANAPIHQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP---------QEDN 678
LP N+P+ IV + P + A++ A L+ DLH+ ++D LLP ED
Sbjct: 664 RLPINSPVKYIVSSYPMPNKAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDA 723
Query: 679 ATEDEPMLFSSD-SDSYEGEGSRGELHEMLVPAVL---RQSWTKSQYPVRLNFYFMQFIP 734
P D S++ G R + + L R Y +N +P
Sbjct: 724 EVPALPDESKVDFSEARPGTTKRRQYYYKKTAEALTDCRPIIGVPSYLYHINLVLSCPLP 783
Query: 735 DPAD----RIYRE------FGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLV 776
+ + RIY FG+ +P + + V L L++ ++ ++
Sbjct: 784 EEQNTRGRRIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQTIILNEM- 842
Query: 777 PSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS---V 833
+ + F +L ++ F P ++S Y+++PV + S V
Sbjct: 843 --QVEKIATFLNYTFTNVLRLQQYLMLFDP--------NASENSYMIVPVKLDEQSDIAV 892
Query: 834 DWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLVYATHK----- 887
DW + C+ +R + P+ P + + + S ++++ ++
Sbjct: 893 DWNFL-ECIYK----------NRNTGPTKIPEETRKNFKFDASKYHDAVIMPWYRSQDQP 941
Query: 888 KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH 947
++FY V I N S + +D + ++ + Y I +++ QPLL N L
Sbjct: 942 QYFY-VAEICTNLNPKSSFPGNDYGTFEEYYLKKYDIQIQNLDQPLLDVDHTSARLNFLT 1000
Query: 948 ----NRK-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMH 994
NRK E+++ + E E L ELC I F + LP I++
Sbjct: 1001 PRYVNRKGVALPTSSEETKRAKRENLEQKQILVAELC--AIHPFPASLWRQAVCLPCILY 1058
Query: 995 RLENLLVAIELK 1006
R+ LL+A +++
Sbjct: 1059 RINALLLANQIR 1070
>gi|194880776|ref|XP_001974538.1| GG21041 [Drosophila erecta]
gi|190657725|gb|EDV54938.1| GG21041 [Drosophila erecta]
Length = 1729
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 248/1051 (23%), Positives = 423/1051 (40%), Gaps = 150/1051 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ L + N IVYL TG GKT +A+L I + + KP ++ +F+ TV
Sbjct: 13 RNYQNRLVDHLTKHNGIVYLPTGSGKTFVAILTIKRFSQDMDKPLENGGKRALFMCNTVE 72
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA ++ FKV + G + + W EI +VLV Q+ L +
Sbjct: 73 LARQQAVALKRYTNFKVGFYVGEQGVDEWTRGQWSDEIRNNQVLVGTAQVFLDLFTQMHL 132
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH HPY + M+ F + K +PR+ G+T + G + A
Sbjct: 133 ALSSVSIVIMDECHHG--TGRHPYHEFMRLFLCAENHKALPRVVGLTGVLLKGNEINQVA 190
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 191 ---KKLKELETTYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFMVTQ 241
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ Q+ + L R+ QS R+ K+ + +L + F L+ G+ A
Sbjct: 242 SINSQITQFFATLDLMDIGVQPVRRSKSLQSCRDPQKKSSVKQLFNDFLFQLQEYGIYAA 301
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 302 SIAIISLIVEFDLKRRQAETQSLKLMHRTALSLCEKIRHILVQKLRDMTDEDDDPDDKVN 361
Query: 401 KE----PFFSKKLLRLIGILS-TFRLQQH--MKCIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L TF + H + C+VFV R T + + +L N +
Sbjct: 362 TEDVILSFSTPKMQRFLQYLKKTFANKDHKDISCLVFVERRYTCKCIYGLLLNFIDSTPE 421
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N + M R K+ ++KFR GE NL++ + V EEG+D+Q C
Sbjct: 422 LRNVLTPQFMVGRNTISQDFEGVMDRKNQKAAIQKFREGEANLMICSSVLEEGIDVQACN 481
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR 564
V+ D +T ++Q++GRAR P + +F++ + E + K S+ + EI +
Sbjct: 482 YVLILDPLKTFNMYVQTKGRARSPNA--SFVLFASELEETKISKQISQYRT-AHAEIAEY 538
Query: 565 TSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFFNPK 612
E +Y+V + GA + + LLHRYC +P D F
Sbjct: 539 LKYRVLERFEPEMYEVKQHFQDVIQPFINKHGAVLLPSAALILLHRYCQTMPTDAFGFVI 598
Query: 613 P-----------KFYYFDDLGGTICHIILPANAPIHQIV-GTPQSSMEAAKKDACLKAIE 660
P + Y + I LP N+ + I+ P + + AK A A +
Sbjct: 599 PWINLLQEDECIRLYGDCARSKYVVSIKLPLNSRLKDIIYSDPMDNAKEAKMSAAFNACK 658
Query: 661 DLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ 720
L+ LG LN+ LP T E + +D +E G+ V A+ R+ K+
Sbjct: 659 LLYNLGELNERFLP----ITMKERVAAIADV-HFEHWKKYGD----DVTAIERKENVKTV 709
Query: 721 YPVRLN----FY---------------FM--QFIP-DPADRIY------REFGLFVKSLL 752
R N FY F+ QF D + +Y R + + ++++L
Sbjct: 710 PNYRTNCPAEFYDARPRVGELCYAYEIFLEPQFESCDYTEHMYINLQTPRNYAILLRNML 769
Query: 753 PGEAEHLKVDLHLARGRSVMT------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
P AE + L +G+ ++ ++V Q + + V D + F
Sbjct: 770 PRLAE---MPLFSNQGKLLVRVANEPLRVVIENTEQLELLHQFHGMVFRDLLKIWQPFFV 826
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHG 863
L + S YL++P++ + +DW ++ + P + RK +
Sbjct: 827 LDR-----RSKENSYLVVPLLLGADQQKRIDWPLVTKFQRLPQ-AEKSSVLQRKQQTAPR 880
Query: 864 PLQLH----NGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLI 919
P W + + + +V H++ +T + F + K+ ++ + +
Sbjct: 881 PEDFEGKIVTQWYANFETKRMVVTKVHRE----LTPLSFME------KNHQDKTYYEFTM 930
Query: 920 SSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKI 975
S YG H+ H + L+ + L +L + NR ++S + L PELC
Sbjct: 931 SKYGNHIGDVVHKDKFLIEVRELTDQLNFYVQNRGKSSAQSKARAKII--LIPELC--FN 986
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI++R+ LL A L+
Sbjct: 987 YEFPGDLWLKLIFLPSILNRMHFLLHAEALR 1017
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 208/474 (43%), Gaps = 115/474 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1202 FLAAITSSGTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGSLTQVKSMLVSNRNL 1261
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSK------------ 1119
L ++ I F P L R P + +
Sbjct: 1262 LYCLRDTDIPKKISTVLFTPRYTWLPPSISLPHNVLTLWRENPELANMIGPHNLRDLALG 1321
Query: 1120 ETERTIH---------SQYDG--------RAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
E E + S +G A D +AEV G + K IAD +EAL
Sbjct: 1322 EEESMVKGYCNDINYKSFVEGCRANAQSHHAGADFSAEVNFCVGLVSIPDKVIADTLEAL 1381
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQVTNICISSK--SFLPLS 1207
+G + + G + A L++ I +E S++ S++ FL
Sbjct: 1382 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNSTEIDGFL--- 1438
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPS+ NR+ GCYQ LEF+GDA+LD+LI+ Y++
Sbjct: 1439 --INHYHLENNLGYTFKDRGYLLQALTHPSYPTNRITGCYQELEFIGDAILDFLISVYIF 1496
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM----- 1320
+ PG LTDLRS LVNN A + V + F++ ++ +L+E+I+ +V +
Sbjct: 1497 ENNTNMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAMLAESISKFVHFQESQRH 1556
Query: 1321 --------------ITPSS--------------------TREVKEGPR----------CP 1336
+ P+S E + PR P
Sbjct: 1557 RVTNHVRILLEEADVQPTSLDLDDYLDMTELNNALKSISQEEQNDQPRGEFNMSTNVDVP 1616
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
K LGD++E+ + AI LD +L W+++ + P L+ N+ +NPIR+L+E
Sbjct: 1617 KALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELQEFARNVPINPIRQLME 1669
>gi|170181362|gb|ACB11577.1| dicer-1 CG4792-PA-like protein [Apis mellifera]
Length = 1946
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 245/543 (45%), Gaps = 122/543 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1416 SPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1475
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFF------------------------A 1108
N NL +L + L + + +P D PC + A
Sbjct: 1476 NLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSTLWNQADIPA 1535
Query: 1109 LGRRCPRICS---KETERTIH------SQYDGRAPDDLNAEVRCSKGH-----HWLHKKT 1154
L P + +ETE+ + + + P++L+ +RC + H + K+
Sbjct: 1536 LQAVNPFEITQLVRETEQKLGVMKNELDRNETTLPNNLD-NMRCFIPYNLITQHSIPDKS 1594
Query: 1155 IADVVEALVGAFIDDSGFKAA--------------------------------TAFLK-- 1180
IAD VEAL+GA++ G + A T F+K
Sbjct: 1595 IADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPKDRIPGSTPFVKGK 1654
Query: 1181 -------WIGI---QVEFEASQVTNICISSKSFLPLSASLD-MATLEILLGHQFLHRGLL 1229
W I ++E + + + + L L LD LE +G++F L
Sbjct: 1655 NEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLM--LDGYEELEKNIGYKFHDISYL 1712
Query: 1230 LQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
LQAF H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1713 LQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGALTDLRSALVNNT 1772
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRC 1335
FA++AV F+K+ S LS IN +V +Y + E E
Sbjct: 1773 IFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSIGEEYYLIGEEECEEAEDVEV 1832
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLELCNSY 1393
PK LGD+ ES GAI L SG +L+ VW + + + + I +FS N+ +PIRELLEL
Sbjct: 1833 PKALGDVFESLAGAIYLGSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLEL---- 1888
Query: 1394 DLDLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKA 1449
P K GK LA+ + DVF + R I A++ KLK
Sbjct: 1889 -----EPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRNYRIAKCTAAKCALKKLKR 1943
Query: 1450 AGY 1452
Y
Sbjct: 1944 IQY 1946
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFL-----VGVNAGLKSMSRN------AMKSI 476
++FV++ A+ L Y+L + + HFL + N S S++ + +
Sbjct: 440 VIFVDKAFVAKVLFYLLNEIS-MHDEELHFLSPLYTIEKNIDDISYSKDLEIEHRKQEEV 498
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L++FR E N+L++T + EEG+DI C V+R+D P+T S++Q + RAR P + Y LV
Sbjct: 499 LKRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAPDALYVLLV 558
Query: 537 DSGNQRE--LDLIKNFSKEEDRMNR------EIMDRTSSDAFTCSEERIYKVDSSGAC-I 587
+E L + E+ + + + +D + +D A +
Sbjct: 559 SQEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAAMIPHYKPLDGGDAPKV 618
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPANAPIHQIVGT- 642
+ +SL++RYC+KLP D F P++ D++ IC + LP N+P+ IV +
Sbjct: 619 TFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNIDNILMYICSLRLPINSPVKYIVSSY 678
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
P + A++ A L+ DLH+ ++D LLP
Sbjct: 679 PMPNKAMARRMAALQLCIDLHRKNEIDDNLLP 710
>gi|336373452|gb|EGO01790.1| hypothetical protein SERLA73DRAFT_85682 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1354
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 280/1141 (24%), Positives = 463/1141 (40%), Gaps = 225/1141 (19%)
Query: 406 SKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSYILQN----LKFLASWRCHFLVG 460
+ K +L+ IL + + L + IV V + A A+ +L+N L FL +
Sbjct: 187 TPKFAKLVQILKSCQILGSDFRGIVIVQKRAVALAIVDLLRNSDNGLGFLRPY------- 239
Query: 461 VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
A + + KF G NLLV TK E+ LDI LVI++DL E+ S+I
Sbjct: 240 --ALISTSDFYHQDETCRKFSLGTHNLLVITKSNED-LDISASSLVIKYDLFESQLSYIY 296
Query: 521 S---RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS---- 573
+ GR A D ++R L + +FS+E +RTS + F
Sbjct: 297 AWCHTGRCHSYLVHMAEKGDETHRRILSELTSFSQE---------NRTSIEKFKEYRGRF 347
Query: 574 ------EERIYKVDS----------------SGACISAGYGVSLLHRYCSKL-----PHD 606
E+ I+ DS + I S ++R + + P D
Sbjct: 348 LLPHKLEDTIHSYDSQTEDEGEKSVSLKDPVTSNRICLRDATSTVYRLAAAMYDVEKPFD 407
Query: 607 -EFFNPKPKFYYFDDLGGTI--CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
E F + D+ G C+++LPA+ + G+ + A++ AC +L
Sbjct: 408 VELFRINK---HLDEQGSWTYSCNVMLPAHPTLRVFTGSSCPTPADARRSACYYTCTELF 464
Query: 664 KLGALNDYLLPQED----NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT-- 717
G L+ L PQ+ ED+ + + G+ + L+ PA S T
Sbjct: 465 NAGVLDYRLFPQQRLKPARFLEDDFEEPKKNMSNKNGQATPNHLYPRRKPAFWSNSLTAV 524
Query: 718 --KSQYPVRL---NFYFMQFIP------DPADRIYREFGLFVKSLLPGEAEHLKVDLHLA 766
+ YPV + F Q+ P P R++ +F LF + LHLA
Sbjct: 525 FNDTLYPVMVALSGFSPDQYAPVLLLTRHPLPRMH-DFKLFFSGI--------SAPLHLA 575
Query: 767 RGRSVMTKLVPSGIMQAQQFQEMFLKVILDR------SEFNSEFVPLGKDDYCESSSSTF 820
G + ++ + + Q+ +++ ++ +E + PL D C +SS
Sbjct: 576 WGGPL--EVDQNQLALLHQYTLRICRIVANKPFACPLNEMAYFYAPLKSD--CTRTSSQV 631
Query: 821 YLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
+ + W+ +R ++S + TP W + D+ N
Sbjct: 632 QSKWNIPDFSEFICWESVR--IASRQWATPLN------------------WRNVEDLAND 671
Query: 881 LVYAT-HKKWF-----YLVTNIVFEKNGYSPYKDSDSSSHVDHLIS-----SYGIH-LKH 928
A +W Y V + + S DS + +L+ G+ L
Sbjct: 672 TADAVIQDRWVEFTRRYYVVKTRPDLSPMSKPADSPREAAYPNLLEYCKSRRKGLDCLVD 731
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSL 988
+QPL+ L N L + S + + L PELC K+ + + ++L L
Sbjct: 732 QEQPLIEVSKTPGLSNHLSPTFRPLTTSAKASAKY--LIPELCA-KLTIPASTLRTAL-L 787
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL-GD 1047
LPSI R++++L+ EL +A F ++ E+LL A++T + ERLE+L GD
Sbjct: 788 LPSISRRIDDILIVKEL----NAKF-FNHHITEELLLAAISTPSAGFDYDYERLEVLAGD 842
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF-----D 1102
AFLKY ++F+ + +EG L R ++N LLK A L +I+ +PF
Sbjct: 843 AFLKYLSSIYVFVTNPAKNEGALHVSRQQIISNKALLKTACTVGLPPFIQSRPFSYKVWQ 902
Query: 1103 PCQFFALGRR---CPR--------------ICSKETE-------RTIHSQ--YDGRA-PD 1135
P F + R P + KETE + I S+ G+A P
Sbjct: 903 PPNFSLVSIREDFTPNDDTKKISKAPSQSPLARKETEAIMEAPPKKIESEDSVKGKALPG 962
Query: 1136 DLNAEVRCSKGHH------WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QV 1186
+ + ++G WL K IADVVEA++GA G A K + I +
Sbjct: 963 SHASSKKENRGQQDTQYTQWLGDKAIADVVEAIIGAAYISGGRDLALTTAKTLDIPIRNI 1022
Query: 1187 EFEASQVTNICISSKSFLP---LSASL---DMATLEILLGHQFLHRGLLLQAFVHPSFNR 1240
E A K+ P ++A L + +E ++GH+F + LL QA H S
Sbjct: 1023 EHWAD------FGRKALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLLAQALTHASVQG 1076
Query: 1241 L-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFY 1299
CY+RLEF+GDA+L++++ ++++ K+ PG LT ++ +V+N A A V V +
Sbjct: 1077 YQSTCYERLEFIGDAILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGLH 1136
Query: 1300 KFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESS 1346
+ ++++S L+ I Y+D + T E + R PK L D+VES
Sbjct: 1137 EHILYESFPLAGNIQGYIDEL-KKKQTEEYELAAREQRTPGQFWLDVEPPKALSDVVESI 1195
Query: 1347 LGAILLDSGFN-------LNTVWKIMLSFLDPILKFSNLQLNPIRELLEL-----CNSYD 1394
+GAI + GF N + K F + + L +P + +LEL C S++
Sbjct: 1196 IGAIYISDGFQPIGSELVFNNILK---PFYNKHITLKTLSHHPTKVILELLEAHGCQSFE 1252
Query: 1395 L 1395
+
Sbjct: 1253 I 1253
>gi|340516882|gb|EGR47129.1| predicted protein [Trichoderma reesei QM6a]
Length = 1376
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 181/658 (27%), Positives = 303/658 (46%), Gaps = 66/658 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ+E+ K++++N+IV + TG GKT +AVL I + + + I F+APTV+L
Sbjct: 2 RAYQIEMLDKSLKQNVIVAMDTGSGKTQVAVLRIKKELEICDASK--IIWFIAPTVSLCH 59
Query: 120 QQAKVIEESI-GFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ V++ I + T G S D W +D +++ PQ+LL L H ++ +
Sbjct: 60 QQHDVLKLQIPAVPMMTLAGNSNIDAWGPDIWAILLDTVRIVISTPQVLLDALDHAYLNL 119
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM---KVPRIFGMTASPVVGKGASAQA 234
L+ALL+FDE H+ +S P KIM Y P + VP + G+TA+P S Q+
Sbjct: 120 GLLALLVFDEVHNCIGRS--PGGKIMLHHYHPRKLAGESVPAVLGLTATP------SIQS 171
Query: 235 NLPKSINSLENLLDAK-VYSVEDAEDLESFVSSPVVR--VYQYG------PVINDTSSSY 285
L I++LE L+DA+ V ++L V P ++ +Y+ G P + D Y
Sbjct: 172 EL-ADIDALEWLMDARCVSPTLHRDELLKCVKRPNIKHIIYKAGKEDITTPTMRDLDRVY 230
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQS---LRNTTKQLNRLHDSMK-FCLENLGVCGAL 341
+ +I + YI L D + L K + MK FC + +C L
Sbjct: 231 -----RALDILEDPYILMLRNNPTDRNNRLLLTAIEKYDTYTQNQMKSFCARSREICKQL 285
Query: 342 --HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVF-----AAICRRDGIASDL 394
A+ + + + + ++ + + +D+ +++S ++ A I RR +
Sbjct: 286 GPWAADLFIWKAISAHLDKVDRQTDGVDEYGNKWSSGSTSFLEKKHLADIYRRVKVQRPS 345
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKFLASW 453
+V ++ S K+ +LI +++ I+FV V L+ +L N + +
Sbjct: 346 DVPQVFED--ISDKVGKLI--FELLSVEEPTVGIIFVEERVMVAMLAEVLSVNHTITSRY 401
Query: 454 RCHFLVGVN--AGLK----SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
R +VG + AG + + L+ FRSG++NLL+AT V EEG+D+ C LVI
Sbjct: 402 RIGTMVGTSNYAGRRKAVYDFDQKTDYKDLQSFRSGKINLLIATSVLEEGIDVPACNLVI 461
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLVDSGN------QRELDLIKNFSKEEDRMNREI 561
FD P T SFIQ RGRAR S D N Q + + + ++E+R RE+
Sbjct: 462 CFDTPTTPKSFIQRRGRARSKDSNLLLFFDDANPAILKWQAKEEEMNRIFEDEERAIREL 521
Query: 562 MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL 621
S++ + + V S+GA + L +C L +F + +P + +
Sbjct: 522 GKLEDSESPSTIS---FTVPSTGARLDFDNAKQHLEHFCRVLCPSDFVDSRPDYIIRREQ 578
Query: 622 GGTICH--IILPANAPIH---QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ ++LP P++ +P S + A KDA +A L+ +N+ LLP
Sbjct: 579 DSPLLTAIVLLPPFLPVNLRQHTSASPWRSEKNATKDAAYQAYIALYDAKLVNENLLP 636
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 143/318 (44%), Gaps = 41/318 (12%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+P+++H L +L+A EL + + E +++ +A++ E + ERLE LGD
Sbjct: 885 LIPTMIHELGVMLMAKELAY---SVLDEVGISDLQLVKEAISARSASEPVNYERLEFLGD 941
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ EG L+ R V+NS L K A L +I +PF
Sbjct: 942 SILKFCACMRAAAEKPDYPEGYLSYWRDRLVSNSRLYKAALEFGLPRFILTKPF------ 995
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
G++ + E + Q D P+ L KT+ADVVEAL+GA
Sbjct: 996 -TGQKWRPLYLDE----VLQQGDVATPEKRK-----------LSTKTLADVVEALIGASY 1039
Query: 1168 DDSGF-KAATAFLK------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLG 1220
D G KA T K W + + E+ + ++ + LE L+G
Sbjct: 1040 VDGGLSKAVTCISKFVPEGSWTSVDADRES-------LFARVPDGEPLPPPLEPLEKLIG 1092
Query: 1221 HQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ F + LL++A H S+ G +RLEF+GDAVLD +I + L+ + P L ++
Sbjct: 1093 YTFQKKALLMEALTHASYAADFGTRSLERLEFIGDAVLDNIIVTKLFRLKPALPHFRMHT 1152
Query: 1279 LRSMLVNNQAFANVAVDQ 1296
L++ LVN A + ++
Sbjct: 1153 LKTGLVNGDFLAFMTMEH 1170
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+RLEFLGD++L + + P G L+ R LV+N A++ +F++
Sbjct: 933 YERLEFLGDSILKFCACMRAAAEKPDYPEGYLSYWRDRLVSNSRLYKAALEFGLPRFILT 992
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
+ Y+D ++ ++ K L D+VE+ +GA +D G +
Sbjct: 993 KPFTGQKWRPLYLDEVLQQGDVATPEKRKLSTKTLADVVEALIGASYVDGGLS 1045
>gi|388330447|gb|AFK29469.1| Dicer1 [Locusta migratoria]
Length = 2324
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 214/482 (44%), Gaps = 114/482 (23%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D + EG+L+ RS V+
Sbjct: 1782 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVS 1841
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQF-------------------------- 1106
N NL +L R + + +P D PC +
Sbjct: 1842 NLNLYRLGRRKVFGESMIATKFEPHDNWLPPCYYVPRELEQALVEAGIPASHWNRADIPN 1901
Query: 1107 -FALGRRCPRICSKETERTIHSQY------DGRAPD----DLNAEVRCSKGHHWLHKKTI 1155
L R IC ER Q DG D ++ C ++ + + +I
Sbjct: 1902 LLPLSRE--EICELVRERCNQFQRCKDCDEDGMPTQSEDYDSVDKMPCFIPYNLITQHSI 1959
Query: 1156 -----ADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------------ 1186
AD VEAL+GA++ G + A F+ W+GI V
Sbjct: 1960 PDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPREEIILKTSSRNAVPKERPVGS 2019
Query: 1187 -----EFEASQVTNI--------CISSKSFLPLSASLDMATLEILLG----------HQF 1223
+E S T + S S L + S LE LL ++F
Sbjct: 2020 LKPTFVYEDSDGTAVWKQVRYGTLQSPSSPLLRNVSNPERKLEALLDGFDVFEQKIQYKF 2079
Query: 1224 LHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
R LLQ+ H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS
Sbjct: 2080 RDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRS 2139
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST------------REV 1329
LVNN FA++AV F+KF S L+E ++ +V T E
Sbjct: 2140 ALVNNTIFASLAVRYGFHKFFRHLSPGLNEVVDRFVRIQEENGHTISEEYYLIEEEECEE 2199
Query: 1330 KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD-PILKFS-NLQLNPIRELL 1387
E PK LGD+ ES GAI LDS +L+ VW++ + I +FS N+ +PIRELL
Sbjct: 2200 AEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWRVYYRMMKLEIEQFSTNVPKSPIRELL 2259
Query: 1388 EL 1389
EL
Sbjct: 2260 EL 2261
Score = 107 bits (267), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 160/710 (22%), Positives = 275/710 (38%), Gaps = 145/710 (20%)
Query: 428 IVFVNRIVTARALSYILQNLK-------FLASWRCHFLVGVNAGLKSMSRNA------MK 474
IVFV + TA+ L ++L ++ F+A + V A + R A +
Sbjct: 669 IVFVEKKFTAKILYHLLNEIRRNDEDYSFVAP---QYTVDKEADPLTEPREAENEHRKQE 725
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR E NLLV T V EEG+D+ C LVIRFD+P S++QS+GRAR P + Y
Sbjct: 726 EVLKRFRMRECNLLVGTSVLEEGIDVPKCNLVIRFDVPSMYRSYVQSKGRARAPDAHYLL 785
Query: 535 LVDSGNQRE-LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKV--------DSSGA 585
+++ E ++ + + + E + R+ ++ S+ ++ V + +
Sbjct: 786 MIEESRTEEFIESLAQYFEIEQLLLRKCANKEPSEEEEMEADKWTNVIDAYSPPASPNHS 845
Query: 586 CISAGYGVSLLHR-----------YCSKLPHDEFFNPKPKF-YYFDDLGGT---ICHIIL 630
++ + L++R YC+KLP D F P + +D+ G IC + L
Sbjct: 846 SVNMSTAIGLVNRYSPSCDAAPGVYCAKLPSDTFTRLSPLWSLKTEDIDGKIHYICTVRL 905
Query: 631 PANAPI-HQIV--------------------------GTPQSSMEAAKKDACLKAIEDLH 663
P N+P+ H IV G P + A++ A L+ LH
Sbjct: 906 PINSPVKHNIVADVKRTLYYVRYETFVPICIVKNDTQGLPMPTRVLARRIAALETCRILH 965
Query: 664 KLGALNDYLLP--QEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTK--- 718
+ L+D L+P +E +E F D D E SR L RQ + K
Sbjct: 966 QARELDDNLMPVGKERFYIHEECDQF-CDPDDLEDTASRDSLEPKPGTTKRRQYYYKRIS 1024
Query: 719 ------------SQYPVRLNFYFMQFIPD----------PADRIYREFGLFVKSLLP--- 753
+ L +P+ P + + FG+ +P
Sbjct: 1025 EALTDCRPAVGEPSFLYNLGMVLTCPLPEEQNTRGRKIYPPEDSLQGFGILTSKTIPKIC 1084
Query: 754 -----GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLG 808
+ + V L L+ V+TK S I+ F +L ++ F P
Sbjct: 1085 PFPIFTRSGEVSVKLELSDTNVVLTKEKISMIV---TFLNYTFTSVLRLQKYLMMFDP-- 1139
Query: 809 KDDYCESSSSTFYLLLPVIFHKNS---VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPL 865
++S ++++++ K+S VDW+ + R + ++L
Sbjct: 1140 -----QASENSYFIVPTRKKTKDSLAEVDWEFLERIYKECDLRPQPVPQEERALFVFDAA 1194
Query: 866 QLHNG----WSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISS 921
+ H+ W D ++FY V I N S + S+ + ++
Sbjct: 1195 KYHDAVIMPWYRNQD---------QPQYFY-VAEICSHLNPKSTFPGSEYKTFDEYYFKK 1244
Query: 922 YGIHLKHPKQPLLRAKPLFRLRNLLH----NRK-------LEDSESHELE--EYFDDLPP 968
Y I +++ KQPLL N L NRK E+++ + E E L P
Sbjct: 1245 YNIQIQNEKQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVP 1304
Query: 969 ELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAE 1018
ELC + F + LP I++R+ LL+A +++ ++ G E
Sbjct: 1305 ELCTVH--PFPASLWRKAVCLPCILYRINALLLADQIRCQVANDIALGGE 1352
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R++Q+EL A E NIIV L + G+ IA LI E ++ IR+P K+ ++L ++A
Sbjct: 17 REHQVELLDAAKERNIIVCLCSSSGRVFIATKLIQEFSNAIRRPIKNGGKRSVYLVDSMA 76
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
LV+ QA I V G S DWEKE+ + +VLVM ++ + ++
Sbjct: 77 LVEHQAAYINNLTDLTV----GEYSEFSSVTDWEKELMEKQVLVMTSKVCSDIISSGILR 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA 230
+E I +LI DECH+ V NHP KIM+ I PRI G+TA P+ A
Sbjct: 133 IEDINVLILDECHN--VLQNHPMRKIMRWVSLSPIK--PRILGLTA-PIFNSTA 181
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L GH ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1775 LEGHTGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLS 1833
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1834 HLRSKQVSN 1842
>gi|195996181|ref|XP_002107959.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
gi|190588735|gb|EDV28757.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
Length = 685
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 238/505 (47%), Gaps = 68/505 (13%)
Query: 922 YGIHLKHPKQPLLRAKPLFRLRNLL------------------HNRKLEDSESHELE--E 961
YGI +K+ QPLLR K L + RN+L + + D+ +H +
Sbjct: 117 YGIMIKNTTQPLLRPKYLSKKRNMLRSNSGQKSQFSVKSCNKSQTQSVADTITHHSKGKS 176
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
+L PELC+ I F + SL+ + SI+ R+E++L E ++ + S+ G+ +
Sbjct: 177 KVIELIPELCKRSI--FPASVWKSLACIRSILWRMESMLSVKEFENKMQESWIVGSSRNE 234
Query: 1022 EML---------LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTR 1072
L LKALT + + F+LE LE LGD++LKYAV FL + EG+L+
Sbjct: 235 RQLQNNSLTMTILKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKFHEGQLSS 294
Query: 1073 RRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF-----FALGRRCPRICSKETERTIHS 1127
+S V+N NL ++ + L YI D F++ ++ I +E T++
Sbjct: 295 LKSKIVSNENLYQIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNL 354
Query: 1128 QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFL-KWIGIQV 1186
R + +C IADV+EAL+G + + G +A F+ +GI+V
Sbjct: 355 SMTSRVHPTQKLKNKC-----------IADVMEALLGGILLELGENSANNFITNNLGIKV 403
Query: 1187 EFEASQVTNICISS-KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLG- 1242
+ + + + K + + ++ LE +LG+ F R LL+ A H ++ NR+
Sbjct: 404 GRLSHNIAKLDDDARKEISKIYNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAE 463
Query: 1243 --GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYK 1300
CYQRLEFLGDA+L Y++ + Y KP L D + N++ A + + +K
Sbjct: 464 GVECYQRLEFLGDAILQYIVVRHCYHANNNYKPADLHDFVEASLQNESLAVMTMVYGIHK 523
Query: 1301 FLIFDSNVLSETINNYVDYMITPS------STRE--------VKEGPRCPKVLGDLVESS 1346
+ ++S L IN + + T ST E +K+G PK LGDL ES
Sbjct: 524 YFFYNSPSLFSQINQLLQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESL 583
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDP 1371
+GAI +D G ++ V ++L L P
Sbjct: 584 IGAIFIDCGRSIEVVNDLVLRLLQP 608
>gi|134081603|emb|CAK46537.1| unnamed protein product [Aspergillus niger]
Length = 1352
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 167/638 (26%), Positives = 284/638 (44%), Gaps = 105/638 (16%)
Query: 94 YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWE 150
+E +H + + FL PTVAL QQ K + ++I + RT K W+
Sbjct: 35 WENSHELESNPHKLIWFLTPTVALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWD 94
Query: 151 KEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD 210
+ + +V+V +L + H F+K+ + L+IFDE HH + HP KIM+DFY P
Sbjct: 95 AILKEMQVVVSTHAVLADAMSHGFVKITQLGLMIFDEAHHCMRR--HPANKIMQDFYHPA 152
Query: 211 IMK-----VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA--KVYSVEDAEDLESF 263
+ + VP+I G+TASPVV + + +E+ LDA K +E L +
Sbjct: 153 LERHGAEAVPKILGLTASPVVRSNR-------QELLKIESNLDAVCKTPRTHRSE-LMTH 204
Query: 264 VSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT------ 317
P ++ + PV+ D +++ + YI L + D ++L+
Sbjct: 205 THRPHLQQILFTPVLLD-------------DLQDDPYIKKLRKSPLDGRALQKVLESGKT 251
Query: 318 --TKQLNRLHDSMKFCLENLGVCGA---LHASYILLSGDETMRNELIEAEGNTIDDSLCR 372
QL R E LG A +HAS E ++A D++
Sbjct: 252 YCNDQLKRFATRSLHIFEELGEWAADYFIHASI-----------EQLKARAGNSADTMGW 300
Query: 373 FASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVN 432
+ + + + + DL+ + + P S K L+ L T + + + ++F
Sbjct: 301 TDEEKAYLLDIVSKLPIPNIDLTHSDPDRIPI-SSKFRSLLEFLDT-KGEPNFSGLIFAK 358
Query: 433 RIVTARALSYILQNLKFLA-SWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGEL 485
+ T + +L +RC VG + G + + L +FR+G+
Sbjct: 359 QRATVSVMEKLLSIHPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQK 418
Query: 486 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR--- 542
NL++AT V EEG+DI C +V+ FD P + SF+Q RGRAR QS YA + + ++
Sbjct: 419 NLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSAL 478
Query: 543 ------ELDLIKNFSKEEDRM---------NREIMDRTSSDAFTCSEERIYKVDSSGACI 587
E +I+ + +E R+ N E+++R +V S+GA +
Sbjct: 479 SKWEDLEQAMIEAYEDDERRLREAWALEAINEEVVER-------------LEVQSTGAVL 525
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD----LGGTICHIILPA--NAPIHQIVG 641
+A V+ L+ +C+ LP + + +P+F Y D L GT+ LP+ + + +I G
Sbjct: 526 TADTAVAHLNHFCAVLPRQPYASNEPEFSYEKDDADLLRGTVT---LPSCVHPGVRRIQG 582
Query: 642 TPQSSME-AAKKDACLKAIEDLHKLGALNDYLLPQEDN 678
E AA+K+A +A + L++ G L+D+LLP + N
Sbjct: 583 QRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFKRN 620
Score = 117 bits (294), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 189/461 (40%), Gaps = 79/461 (17%)
Query: 943 RNLLHNRKLE----DSESHELEEYFDDLPPELCQLKIIGFSKDI-GSSLSLLPSIMHRLE 997
RNLLH + L DSE+ + + E C + + +++ I G +S+ I+ RLE
Sbjct: 819 RNLLHRQTLAAKQPDSETPAISSKIRLILAENCTIDKLPYAETIFGRFISV---ILDRLE 875
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
LVA L + S ++ A+T Q + +R E GD+ LK+ V
Sbjct: 876 ATLVATRLCETILRDLEFS---SIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQ 932
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF H EG L+ R V NS L + A L +I ++ F P ++ A P I
Sbjct: 933 LFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSA-----PLIS 987
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
K + + + K +ADVVEAL+GA D GF AA A
Sbjct: 988 EK---------------------ISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHA 1026
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+ +V E T + + +L+ L +G+ F ++ LL+++ HPS
Sbjct: 1027 CIHRFLPEVNLENIDRTTAPMPKDGV--TNHTLNDDHLMAHIGYTFTNKSLLVESLTHPS 1084
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA----- 1290
F+ YQRLEFLGDAVLD I S L S ++ G +T ++ +VN A
Sbjct: 1085 CQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCME 1144
Query: 1291 --------NVAVDQS-------------FYKFLIFDSNVLSETINNYVDYM--ITPSSTR 1327
NV V + ++F+ + L + + + S
Sbjct: 1145 FALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIH 1204
Query: 1328 EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+K P P K D++ES LGAI +DS NL
Sbjct: 1205 GLKHSPSYPWKSLSQLNADKFFSDIIESILGAIFIDSHGNL 1245
>gi|350289218|gb|EGZ70443.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1547
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 191/672 (28%), Positives = 303/672 (45%), Gaps = 98/672 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + ++++NIIV + TG GKT +AVL I A + + K I FL PTVAL
Sbjct: 76 ARAYQLEMFEASLKQNIIVAMDTGSGKTQVAVLRI---ARELEQRDKRIW-FLTPTVALA 131
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ +V++ I K CG G W+ + ++V QIL H F+
Sbjct: 132 RQQHQVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSFV 191
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASA 232
+++ ++L++ DE H+ +HP A++M + Y P + VP I G+TASP+
Sbjct: 192 RLDSLSLIVIDEAHNC--SGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPL------- 242
Query: 233 QANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYG--------PVINDTSS 283
++N I LE +LDA + E+L + V+ P + V YG P D +
Sbjct: 243 KSNNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSKGPGTEPTPTDLMT 302
Query: 284 SYVTCSEQLAEIKREQYISAL--SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV---- 337
++ +L +I ++ + L R + LR + + L + N +
Sbjct: 303 RFLEAYHRL-DISKDPDVLLLKAQRTERAREKLRQMVTKKDTLAQKELRGVYNRALLVRR 361
Query: 338 -CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
G A Y L M EL E + R+ +A +
Sbjct: 362 EIGPWAADYYLTRTVSHMLAELERGEP----PAQHRYIGEA-------------LRSIPI 404
Query: 397 IEVLKEPF-FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WR 454
+ KEP S K+ L+ +L++ QQ IVFV V +++I+ +R
Sbjct: 405 PAISKEPIQLSPKVQTLLKVLASH--QQDPVGIVFVKERVMVSIVTHIISTHPLTKDRYR 462
Query: 455 CHFLVGVNAGLKSMSRNAMK-------SILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
++G A + +RN M + LE FR G NLLVAT V EEG+D+ C LVI
Sbjct: 463 TASMIG-TASVPGKARNHMDMTKKEDMTSLEGFRRGRFNLLVATSVLEEGIDVPICNLVI 521
Query: 508 RFDLPETVASFIQSRGRARMPQSE-YAFLVDSGNQRELD------LIKNFSKEEDRMNR- 559
FD P + SFIQ RGRAR S Y + ++ + +D L+K ++E R N
Sbjct: 522 CFDEPSNIKSFIQRRGRAREVSSTLYLMVQNASGESAMDWHNLERLMKERYEDEMRQNAE 581
Query: 560 -EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK-------LPHDEFF-- 609
E++D ++ + +V+S+GA ++ S L+ +C+K L + +F
Sbjct: 582 LELLDDPRIGSYP-----VLEVESTGARMTIRDVRSHLNHFCAKVSSRSRYLQKEPYFVI 636
Query: 610 ---NPKPKFYYFDDLGGTICHIILPAN-AP---IHQIVGTPQSSMEAAKKDACLKAIEDL 662
+P P L H LPA+ AP H+ + T +S + A DA +A + L
Sbjct: 637 RQVSPDPASPGRRTLLQATVH--LPASLAPDLRRHESLWT-WTSEKLAIMDASFQAYKAL 693
Query: 663 HKLGALNDYLLP 674
+ G +N+ LLP
Sbjct: 694 YNAGLVNENLLP 705
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 127/309 (41%), Gaps = 43/309 (13%)
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH-----LLSASFPEGAEVSAEMLL 1025
Q+++ F +++P+ +E LVA +L + L + P ++
Sbjct: 945 TQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLP--------LIT 996
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
AL + + + ERLE +GD LK+ L E L++ + VNN L +
Sbjct: 997 TALISSGSRGPTNYERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCR 1056
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
+ L YI A + P+ + + ++P+ +AE R
Sbjct: 1057 ASRDFGLDEYI-------IHSAASKKWRPKFVEDYLD-------EMKSPE--SAETRQ-- 1098
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAA---TAFLKWIGIQVEFEASQVTNICISSKS 1202
+ K +ADVVE+L+GA G A A L +F+ +++
Sbjct: 1099 ----MSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEISLSRAQLFE 1154
Query: 1203 FLPLSASL--DMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLD 1257
F P A L + LE + + F + LL++A HPS L CY+ LEFLGDA+LD
Sbjct: 1155 FAPKDAILSKQLEPLEKAMSYTFHKKSLLIEAMTHPSCAGLSTNESCYELLEFLGDAILD 1214
Query: 1258 YLITSYLYS 1266
++ L +
Sbjct: 1215 VIVVKRLMA 1223
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+RLEF+GD +L + +++P L+ + LVNN + D +++I
Sbjct: 1010 YERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYIIH 1069
Query: 1305 DS---NVLSETINNYVDYMITPSS--TREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
+ + + +Y+D M +P S TR++ K++ D+VES +GA + G +
Sbjct: 1070 SAASKKWRPKFVEDYLDEMKSPESAETRQMSS-----KMVADVVESLIGAAYMCGGMS 1122
>gi|255933596|ref|XP_002558177.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582796|emb|CAP80997.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1393
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 180/676 (26%), Positives = 312/676 (46%), Gaps = 88/676 (13%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHI------------------AVLLIYELAHLI 100
+R YQLE+ + + +ENIIV + TG GKTH+ A+L I +
Sbjct: 15 SRGYQLEMLEASRKENIIVAMDTGSGKTHMHVSSFTFCRHVFLTVFFSAILRIIDELENS 74
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEE---SIGFKVRTFCGGSKRLKSHCDWEKEIDQYE 157
P K I FLAPTVAL QQ +VI S+ K+ T R W+K +
Sbjct: 75 DSPDKLIW-FLAPTVALSLQQHEVITSQILSVKTKILTGLDNVDRWTDQGIWDKVLKDIR 133
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRI 217
V+V +L L H F++M +ALL+FDE HH + HP KIM++ Y P +++
Sbjct: 134 VVVSTYAVLADALGHGFVRMSRLALLVFDEAHHCTKR--HPANKIMQNHYHPTLLRS--- 188
Query: 218 FGMTASP-VVGKGASAQANLPKS-INSLENLLDA--KVYSVEDAEDLESFVSSPVVRV-- 271
G A P ++G AS ++ + ++E+ L+A K V E LE+ + RV
Sbjct: 189 -GPNAVPRILGLTASPVVRSSQNELETIESNLNAICKTPRVHRTELLENTHRPHLERVNY 247
Query: 272 -----YQYG-------PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTK 319
YG P+I + + + ++ + + L++ L ++ ++
Sbjct: 248 ISFDEAHYGSGSRLLLPLIECCRAYNIEDDPWVESLRSKDHTVELTKALTTGKTF--CSE 305
Query: 320 QLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE 379
QL E LG G +I S D+ R+ +E + +D Q
Sbjct: 306 QLRNFQARSCHIYEELG--GWAVDFFISASIDQLQRSMQDASEMSHLD--------QMER 355
Query: 380 VFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARA 439
++ + + + + + + S KL L+ L + ++F + T
Sbjct: 356 IYLL----ELLLAMPAPVSAEESNHVSVKLEMLLNFLEKMD-RPGFSGLLFAKQRATVSV 410
Query: 440 LSYILQ-NLKFLASWRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVAT 491
L+ IL + K ++C VG ++ + R+ + L++F+ G NL+V T
Sbjct: 411 LARILSIHPKTRDRFQCAAYVGWSSDRNRKGCLGDLLHRDMQRDTLDEFKVGRKNLIVTT 470
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ-------REL 544
V EEG+D+ C LVI +D P + SF+Q RGRAR +S YA ++ + ++ +EL
Sbjct: 471 DVLEEGIDVSACSLVICYDKPANLKSFVQRRGRARHRESTYALMISNEDELLNLHKWQEL 530
Query: 545 D--LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK 602
+ +IK + ++++R RE+ D +++ +ER++ V+ + A ++A + L+ +C+
Sbjct: 531 EQAMIKAY-QDDERRRREVYDLEATEEHV--KERLW-VEKTSALLTADDALQHLYHFCAV 586
Query: 603 LPHDEFFNPKPKFYYFDD-LGGTICHIILP--ANAPIHQIVGTPQSSME-AAKKDACLKA 658
LP DE+ N P F + ++ +G + + LP + + + G E AA+K+ +A
Sbjct: 587 LPVDEYSNNLPLFSFQENSVGLLLGTVTLPNSVHPTVRRTTGKAWWRTERAARKETAFQA 646
Query: 659 IEDLHKLGALNDYLLP 674
+ LH G +ND LLP
Sbjct: 647 YKALHAYGLVNDNLLP 662
Score = 85.5 bits (210), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 35/306 (11%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEV-SAEMLLKALTTEKCQERFSLERLEILG 1046
+ +I+ RLE LVA H L+ + +G + ++ A++ Q + +R E G
Sbjct: 913 FISAILDRLEASLVA----HRLNDTILKGVGIKDIAHVITAISAPIAQASTNYQRYEFFG 968
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK+ V LF + EG L+ R + NS L + A + ++ F P ++
Sbjct: 969 DSVLKFTVSCQLFFRNGNWHEGYLSESRDKLIQNSRLARAALDLGIDSFVLTSRFTPRKW 1028
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
P I +K + S + K +ADVVE+L+GA
Sbjct: 1029 -----TTPLIRNK---------------------LEPSTAKRNISTKVLADVVESLIGAA 1062
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
D G + A A L ++ + ++ + + +S ++ L L+G+ F
Sbjct: 1063 YVDGGIREAQACLHRFLPEINLFTNDISPLILPQGK--GVSNLINHHRLAGLIGYTFNDP 1120
Query: 1227 GLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LL +A H S ++ YQRLEFLGDAVLD ++ + + ++ G +T L+ +V
Sbjct: 1121 ALLTEALTHASCEYDTSTQSYQRLEFLGDAVLDMVVMAVIAGHPVEMDQGPMTLLKHSVV 1180
Query: 1285 NNQAFA 1290
N A
Sbjct: 1181 NANLLA 1186
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQR EF GD+VL + ++ L+ G L++ R L+ N A A+D F++
Sbjct: 961 YQRYEFFGDSVLKFTVSCQLFFRNGNWHEGYLSESRDKLIQNSRLARAALDLGIDSFVLT 1020
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
+ + + PS+ + KVL D+VES +GA +D G +
Sbjct: 1021 SRFTPRKWTTPLIRNKLEPSTAKRNIST----KVLADVVESLIGAAYVDGG--IREAQAC 1074
Query: 1365 MLSFLDPILKFSN 1377
+ FL I F+N
Sbjct: 1075 LHRFLPEINLFTN 1087
>gi|198457361|ref|XP_001360634.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
gi|198135949|gb|EAL25209.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
Length = 1720
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 234/500 (46%), Gaps = 104/500 (20%)
Query: 984 SSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLE 1043
+S +L+P ++ L L+ ++ H+ A E L A+TT + + +ER E
Sbjct: 1170 TSSALIPQSLNVLPVLMKSVSDDHITPAHQGE--------FLAAITTAGSADVYDMERAE 1221
Query: 1044 ILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP 1103
+LGD+FLK + +L + +EG LT+ +S V+N NL+ ++ I FDP
Sbjct: 1222 LLGDSFLKMSASLYLASRYPDWNEGTLTQVKSRLVSNKNLMYCLRETDIPSRISCSLFDP 1281
Query: 1104 -------------------------------CQFFALGRRCPRI----CSKET-ERTIH- 1126
F L I C+++T R +H
Sbjct: 1282 RLTWLPPSINLPEDVLDVWTEQPSFAKLIGPHNLFDLALSDEEILAGRCNEDTYRRFVHG 1341
Query: 1127 ---SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIG 1183
+Q A D ++ V G + K +AD +EAL+G + + G + L++ G
Sbjct: 1342 CKSNQQGYYAGRDFSSGVNYFFGEVTVQNKVMADTLEALLGVIVRNYGLQHGFRMLEYFG 1401
Query: 1184 I---QVEFEASQVTNICISSKSFLPLSASLDM-------ATLEILLGHQFLHRGLLLQAF 1233
I V+ SQ+ ++ + S ++ D+ + LE LG++F RG LLQA
Sbjct: 1402 ICKPDVDKPLSQLLDLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQAL 1461
Query: 1234 VHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
HPSF NRL GCYQ LEF+GDA+LD+LI++Y++ KL+PG+LTDLRS LVNN
Sbjct: 1462 THPSFPTNRLTGCYQELEFIGDAILDFLISAYIFENNNKLRPGELTDLRSALVNNTTLGC 1521
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPS-----------STREVK---------- 1330
+ V + F++ ++ +LSETI+ +V + + R+V+
Sbjct: 1522 ICVRHKLHLFILAENALLSETISKFVKFQESQGHRVTNHVRFLLEERDVQPVILDLDEEV 1581
Query: 1331 ---------EGP-----------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD 1370
+GP PK LGD++E+ + A+ +D +L T W+++ +
Sbjct: 1582 EMAMENDSGDGPPIGAFNLAQNVDVPKALGDVLEALIAAVYMDCR-DLQTTWQMIYHLFE 1640
Query: 1371 PILK-FS-NLQLNPIRELLE 1388
P LK FS N+ ++PIR+L E
Sbjct: 1641 PELKEFSQNIPISPIRQLHE 1660
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 177/678 (26%), Positives = 292/678 (43%), Gaps = 81/678 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI------CIFLAP 113
R YQL L + N I+YL TG GKT++A+L L + KSI IF+
Sbjct: 9 RSYQLRLVDHITKNNGIIYLPTGSGKTYVAIL---ALKRFSKDMDKSIEEGGKRAIFMCN 65
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYH 172
TV L +QQA + + KV F G S W EI +VLV Q++L +
Sbjct: 66 TVELARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVGTAQVMLNMVTQ 125
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASPVVGKGAS 231
+++++ ++++I DECHH +HPY + M F D +PR+ G+T + G
Sbjct: 126 KYLELSSVSIVIIDECHHG--TGHHPYHEFMHLFLLADRNTPLPRVVGLTGVLIKGNEFK 183
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDL-----------ESFVSSP-VVRVYQYGPVIN 279
A + + LE + + +V D E+L E V+ P V + G I+
Sbjct: 184 LVA---QKLRELETTYRSNIITVSDTEELKNVMLYSTKPRECLVTYPNQVGSLEIGHAIH 240
Query: 280 DTSSSYVTCSEQLAEIKRE--QYISALSRKLHDHQSLRNTTKQ--LNRLHDSMKFCLENL 335
+ + L EI ++ +Y LS +LR+ K+ + L + ++ LEN
Sbjct: 241 RCIEHFYVRLDDL-EIGKQPTRYSKGLS-------TLRDPHKKGYIKTLLNDFQYQLENY 292
Query: 336 GV-CGALHASYILLSGDETMRNELIEAEGNTIDDSLC---RFASQASEVFAAICRRDGIA 391
GV A+ ++L + + A + ++C R + + D
Sbjct: 293 GVYAAAMAIVSVILEFEIKLHQSETLALTHIYKLAICMCNRINHMLKKKLRDLVDDDTEP 352
Query: 392 SDLSCIEVLKEPFFSKKLLRLIG-ILSTF--RLQQHMKCIVFVNRIVTARALSYILQNLK 448
D E F + K+ R + + TF + + + C+VFV R T++ + +L+ K
Sbjct: 353 DDAVHTEETIINFSTPKVQRFLHYVQKTFSGKNAKDICCLVFVERRYTSKCIYQLLK--K 410
Query: 449 FLASWRC-------HFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEG 497
F+A+ F+VG N+ + R KS + +F+ GE NL+V + V EEG
Sbjct: 411 FIAAIPALRDVLVPQFMVGRNSVTADCESVLERKWQKSAIHQFKDGEANLMVCSSVLEEG 470
Query: 498 LDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDR 556
+D++ C V+ D +T ++Q++GRAR +++ F D + I + +
Sbjct: 471 IDVKACNYVLILDPIKTFNMYVQTKGRARSKDAQFVLFSSDLDRIKTNQQINQYRQAHTD 530
Query: 557 MNREIMDRTSSDAFTCSEERIYK--------VDSSGACISAGYGVSLLHRYCSKLPHDE- 607
+ + DR A +E ++ GA + + LLHRYC LP D
Sbjct: 531 IGEYLKDRVLDRAEPLMQEIADHFHELIPPFINEKGAVLLPSSALILLHRYCQSLPSDAF 590
Query: 608 -FFNPKPKFYYFD---DLGGT------ICHIILPANAPIHQIV-GTPQSSMEAAKKDACL 656
F P +D +L GT I LP ++ + I P +S++AAK A
Sbjct: 591 GFVEPWITLISWDQKRELFGTQAASKEFVSIELPLSSSVRDIFYSDPMTSVKAAKISAAF 650
Query: 657 KAIEDLHKLGALNDYLLP 674
K L+ G LN+ LP
Sbjct: 651 KTCIKLYSTGELNERFLP 668
>gi|195150547|ref|XP_002016212.1| GL10619 [Drosophila persimilis]
gi|194110059|gb|EDW32102.1| GL10619 [Drosophila persimilis]
Length = 1720
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 219/460 (47%), Gaps = 96/460 (20%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+TT + + +ER E+LGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1202 FLAAITTAGSADVYDMERAELLGDSFLKMSASLYLASRYPDWNEGTLTQVKSRLVSNKNL 1261
Query: 1084 LKLAARNNLQVYIRDQPFDP-------------------------------CQFFALGRR 1112
+ ++ I FDP F L
Sbjct: 1262 MYCLRETDIPSRISCSLFDPRLTWLPPSINLPEDVLDVWTEQPSFAKLIGPHNLFDLALS 1321
Query: 1113 CPRI----CSKET-ERTIH----SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALV 1163
I C+++T R +H +Q A D ++ V G + K +AD +EAL+
Sbjct: 1322 DEEILAGRCNEDTYRRFVHGCKSNQQGYYAGRDFSSGVNYFFGEVTVQNKVVADTLEALL 1381
Query: 1164 GAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM-------A 1213
G + + G + L++ GI +V+ SQ+ ++ + S ++ D+ +
Sbjct: 1382 GVIVRNYGLQHGFRMLEYFGICKPEVDKPLSQLLDLQLKSTKMRANASPGDIDGFLINHS 1441
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
LE LG++F RG LLQA HPSF NRL GCYQ LEF+GDA+LD+LI++Y++ KL
Sbjct: 1442 YLEQNLGYKFRDRGYLLQALTHPSFPTNRLTGCYQELEFIGDAILDFLISAYIFENNTKL 1501
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN--------------NYV 1317
+PG+LTDLRS LVNN + V + F++ ++ +LSETI+ N+V
Sbjct: 1502 RPGELTDLRSALVNNTTLGCICVRHKLHLFILAENALLSETISKFVKFQESQGHRVTNHV 1561
Query: 1318 DYMITPSSTREV----------------KEGP-----------RCPKVLGDLVESSLGAI 1350
+++ + V ++GP PK LGD++E+ + A+
Sbjct: 1562 RFLLEERDVQPVILDLDDEVEMAMENDSEDGPPIGAFNLAQNVDVPKALGDVLEALIAAV 1621
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
+D +L T W+++ +P LK FS N+ ++PIR+L E
Sbjct: 1622 YMDCR-DLQTTWQMIYHLFEPELKEFSQNIPISPIRQLHE 1660
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 180/678 (26%), Positives = 295/678 (43%), Gaps = 81/678 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI------CIFLAP 113
R YQL L + N I+YL TG GKT++A+L L + KSI IF+
Sbjct: 9 RSYQLRLVDHITKNNGIIYLPTGSGKTYVAIL---ALKRFSKDMDKSIEEGGKRAIFMCN 65
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYH 172
TV L +QQA + + KV F G S W EI +VLV Q++L +
Sbjct: 66 TVELARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVGTAQVMLNMVTQ 125
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASPVVGKGAS 231
+++++ ++++I DECHH +HPY + M F D +PR+ G+T + G
Sbjct: 126 KYLELSSVSIVIIDECHHG--TGHHPYHEFMHLFLLADRNTPLPRVVGLTGVLIKGNEFK 183
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDL-----------ESFVSSP-VVRVYQYGPVIN 279
A + + LE + + +V D E+L E V+ P V + G I+
Sbjct: 184 LVA---QKLRELETTYRSNIITVSDTEELKNVMLYSTKPRECLVTYPNQVGSLEIGHAIH 240
Query: 280 DTSSSYVTCSEQLAEIKRE--QYISALSRKLHDHQSLRNTTKQ--LNRLHDSMKFCLENL 335
+ + L EI ++ +Y LS +LR+ K+ + L + ++ LEN
Sbjct: 241 RCIEHFYVRLDDL-EIGKQPTRYSKGLS-------TLRDPHKKGYIKTLLNDFQYQLENY 292
Query: 336 GV-CGALHASYILLSGDETMRNELIEAEGNTIDDSLC---RFASQASEVFAAICRRDGIA 391
GV A+ ++L + + A + ++C R + + D
Sbjct: 293 GVYAAAMAIVSVILEFEIKLHQSETLALTHIYKLAICMCNRINHMLKKKLRDLVDDDTEP 352
Query: 392 SDLSCIEVLKEPFFSKKLLRLIG-ILSTF--RLQQHMKCIVFVNRIVTARALSYILQNLK 448
D E F + K+ R + + TF + + + C+VFV R T++ + +L+ K
Sbjct: 353 DDAVHTEETIINFSTPKVQRFLHYVQKTFSGKNAKDICCLVFVERRYTSKCIYQLLK--K 410
Query: 449 FLASWRC-------HFLVG---VNAGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEG 497
F+A+ F+VG V+A +S + R KS + +FR GE NL+V + V EEG
Sbjct: 411 FIAAIPALRDVLVPQFMVGRNSVSADCESVLERKWQKSAIHQFRDGEANLMVCSSVLEEG 470
Query: 498 LDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDR 556
+D++ C V+ D +T ++Q++GRAR +++ F D + I + +
Sbjct: 471 IDVKACNYVLILDPIKTFNMYVQTKGRARSKDAQFVLFSSDLDRIKTNQQINQYRQAHTD 530
Query: 557 MNREIMDRTSSDAFTCSEERIYK--------VDSSGACISAGYGVSLLHRYCSKLPHDEF 608
+ + DR A +E ++ GA + + LLHRYC LP D F
Sbjct: 531 IGEYLKDRVLDRAEPLMQEIADHFHELIPPFINEKGAVLLPSSALILLHRYCQSLPSDAF 590
Query: 609 FNPKPKFYYFD-----DLGGT------ICHIILPANAPIHQIV-GTPQSSMEAAKKDACL 656
+P F +L GT I LP ++ + I P +S++AAK A
Sbjct: 591 GFVEPWFTLISWDQKRELFGTQAASKEFVSIELPLSSSVRDIFYSDPMTSVKAAKISAAF 650
Query: 657 KAIEDLHKLGALNDYLLP 674
K L+ G LN+ LP
Sbjct: 651 KTCIKLYSTGELNERFLP 668
>gi|340975794|gb|EGS22909.1| hypothetical protein CTHT_0013870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1660
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 194/697 (27%), Positives = 307/697 (44%), Gaps = 107/697 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQLE+ ++++++N+IV + TG GKT +A+L I YEL + FLAPTV L
Sbjct: 199 RAYQLEMLEESLKQNVIVAMDTGSGKTQVAILRIQYELER-----SDKVVWFLAPTVPLC 253
Query: 119 QQQAKVIEESI-GFKVRTFCGGSKRLKSHCD----WEKEIDQYEVLVMIPQILLYCLYHR 173
QQ VI+ + R CG +++ W+ + V+V QIL + H
Sbjct: 254 HQQHVVIQTQLPAVTTRLICGDDD-IETWSAIPGVWDGVLKHTRVIVSTYQILFDAVAHA 312
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGA 230
+ + ++L++ DE HH +K N P +++MK+ Y P K VP + G+TASPV+
Sbjct: 313 LVPLSALSLIVIDEAHHC-IKMN-PVSRVMKEHYAPLKAKGAQVPAVLGLTASPVMRTN- 369
Query: 231 SAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYG---------PVIN 279
P + LE L A K S AE ++ +V V G PV+
Sbjct: 370 ------PADLEKLEQTLFAVCKTPSRHRAELMQMVTKPDLVTVTYPGDPQGQVPEPPVLG 423
Query: 280 DTSSSYVTCSEQLAEIKREQYI----SALSR-KLHDHQSLRNT--TKQLNRLHDSMKFCL 332
++Y QLA+ Q++ S SR KL S R T + + L K L
Sbjct: 424 RLIAAYRGM--QLAQDPYIQHLVMDGSQRSRAKLQKVVSKRKTRSMEHMYALCIRTKDML 481
Query: 333 ENLGVCGALHASYILLSG--DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGI 390
+ LG A + + ++S D+ EA +D+ + E + R I
Sbjct: 482 QRLGPWAAEYYIHEVISAFFDDP------EASTGPLDEEEVELYNPIFEYNLQVQERRYI 535
Query: 391 ASDLSCIEVLKEPF--------FSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA 439
+S LS + + P S K+L L+ +L +F + I+FV TA
Sbjct: 536 SSILSQVNA-QPPATTDQGPSPLSPKILALLDVLESFAKDDPSRKPVGIIFVRERATAAV 594
Query: 440 LSYILQ-NLKFLASWRCHFLVG-------VNAGLKSMSRNAMKSILEK-----------F 480
LS+IL + + +R +VG G +S R +++K F
Sbjct: 595 LSHILSIHPRTAPHYRVACMVGGTTRVPGSGGGSRSNKRREYIDLIKKGKDDGLEALQAF 654
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
R GE+NL+VAT V EEG+D+ C LV+ FD+PE + SFIQ RGRARM S+ +V G
Sbjct: 655 RQGEVNLVVATSVLEEGIDVPACNLVVCFDVPENLKSFIQRRGRARMGVSKLVLMVPEGE 714
Query: 541 Q------RELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKV---DSSGACISAGY 591
Q RE ++ K +++ R+ R + + + +E Y V +GA ++
Sbjct: 715 QAKGWDEREREM-KEMYEDDMRVVRIVEEIENGIVVETEKEDEYPVLRDPETGAQVTLHD 773
Query: 592 GVSLLHRYCSKL--PHDEFFNPKPKFYYFDDLGGTICHII-LPANAPIHQIVGTPQS--- 645
+ L +C L F +P + + G ++ +P A +H V P
Sbjct: 774 AKAHLEHFCGTLRSSTSAFTELRPFYILHGEHGQSVNTFAPVPLRATVHLPVVLPPELRR 833
Query: 646 --------SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
S A +DA +A + L++ G + +LLP
Sbjct: 834 IEGIRSWLSEADACRDAAFQAYQKLYEAGLVGKHLLP 870
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 147/356 (41%), Gaps = 48/356 (13%)
Query: 960 EEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEV 1019
E FD + P L ++ + + ++P+++ L + L+A + LL+ E +
Sbjct: 1085 EPKFDRIVP-LREVVMDAVPAKYAEAALMIPALLVVLGDHLLA---RDLLTERLREKTGM 1140
Query: 1020 SAEML---LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
+ L ++AL Q E +E LGDA LK+ + + T EG L+ +
Sbjct: 1141 GGDDLGNVVRALWASGAQRPGDYENMEFLGDALLKFLTTVNCEAKYLTYPEGFLSPIKDR 1200
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDD 1136
V+N + A L YI D ++ K S GR P
Sbjct: 1201 IVSNMRFFRAAVGFGLDRYIIDA---------------KMVQKRWRPPTISSILGRPP-- 1243
Query: 1137 LNAEVRCSKGHHWLHKKTIADVVEALVGAFI----DDSGFKAATAFLKWIGIQVEFEASQ 1192
L KT+ADVVEALVGA D FL + I +
Sbjct: 1244 ------SVTAPRQLSTKTVADVVEALVGAAYLSGGTDRALTCVPLFLPDVPIDW-LPVGR 1296
Query: 1193 VTNICIS-SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVH---PSFNRLGGCYQRL 1248
+I + + + PL ++ E LLG++F + LL++A H P+ + G RL
Sbjct: 1297 CRDILFNHAAADDPLPKTMRRIE-EQLLGYEFKKKSLLVEALTHSSCPAGPGVRGSLDRL 1355
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQ--------LTDLRSMLVNNQAFANVAVDQ 1296
E LGDA+LD+L+ + LY +Y GQ L ++S LVN A + +++
Sbjct: 1356 ELLGDALLDFLVATKLYELYKCNVDGQQQMVVPYILHIMKSALVNQDIMAVLILEE 1411
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAF-----------------VHPSFNRLGGCYQRLEF 1250
A+L + L ++LG L R LL + + S + G Y+ +EF
Sbjct: 1109 AALMIPALLVVLGDHLLARDLLTERLREKTGMGGDDLGNVVRALWASGAQRPGDYENMEF 1168
Query: 1251 LGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLS 1310
LGDA+L +L T + Y G L+ ++ +V+N F AV +++I D+ ++
Sbjct: 1169 LGDALLKFLTTVNCEAKYLTYPEGFLSPIKDRIVSNMRFFRAAVGFGLDRYII-DAKMVQ 1227
Query: 1311 E-----TINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
+ TI++ + + ++ R++ K + D+VE+ +GA L G +
Sbjct: 1228 KRWRPPTISSILGRPPSVTAPRQLST-----KTVADVVEALVGAAYLSGGTD 1274
>gi|328716581|ref|XP_003245985.1| PREDICTED: endoribonuclease Dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1489
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 172/342 (50%), Gaps = 44/342 (12%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ HD V EG+L+ RS V+
Sbjct: 1123 SPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 1182
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA-------LGRRCPRI--------- 1116
N NL +L + + +P D PC F + P
Sbjct: 1183 NLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNMITLPT 1242
Query: 1117 ----CSKETERTIHSQYDGRAPDDL-NAEVRCSKG---HHWLHKKTIADVVEALVGAFID 1168
KE E I G + +D+ N + H + K+IAD VEAL+GA++
Sbjct: 1243 FKDPTDKEIEEVIQQFKVGFSNEDIENTPLFVPYNLVTQHSIPDKSIADCVEALIGAYLI 1302
Query: 1169 DSGFKAATAFLKWIGIQV--EFEASQVTNICISSKSFL--------PLSASLD-MATLEI 1217
G + A F+ W+GI+V + S++ + S L L+ +D + E
Sbjct: 1303 SCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPSSPLLRNVDDPEGELTKLMDGFESFEQ 1362
Query: 1218 LLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ 1275
LG+ F R LLQA H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG
Sbjct: 1363 HLGYHFQDRSYLLQAMTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGA 1422
Query: 1276 LTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
LTDLRS LVNN FA++AV F+K+ S LS+ + +V
Sbjct: 1423 LTDLRSALVNNTIFASLAVRNGFHKYFKHLSPGLSDVVCRFV 1464
Score = 92.8 bits (229), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 427 CIVFVNRIVTARALSYILQNLKFLAS----W-RCHFLVGVNAGLKS------MSRNAMKS 475
I+ VN +TA L Y+ +LK W + + V A + + +
Sbjct: 191 AIILVNNKMTASILYYLFLDLKNSNKEDFGWIQPQYTVDKEADPITEPKEFEIEHKKQEE 250
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
L +FR E N+L+ TKV E G+D+ C LVI +++P + S+++S+ RA+ + Y +
Sbjct: 251 TLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKSRAKTLDAHYILM 310
Query: 536 VD----SGNQRELDLIKNFS---------KEEDRMNREIMDRTSSDAFTCSEERIYKVDS 582
D S L L K+ + K+ D DR + F + K DS
Sbjct: 311 FDEDATSNILSRLKLYKDINQMLLSHCTLKDIDMEKETYADR--YNWFVTPFKPGKKEDS 368
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF----YYFDDLGGTICHIILPANAPI-H 637
A + + L++RYC+KLP D F P + +++ +C I LP N+PI H
Sbjct: 369 --AFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKTQSVVYENQPMFVCSIRLPINSPIKH 426
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
I G P AK+ A L+ LH G L+D L P
Sbjct: 427 DIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQP 463
>gi|334283448|gb|AAR82738.2| SD11113p [Drosophila melanogaster]
Length = 1701
Score = 172 bits (436), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 237/1034 (22%), Positives = 428/1034 (41%), Gaps = 148/1034 (14%)
Query: 74 NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQQQAKVIEESIG 130
N IVYL TG GKT +A+L++ + KP +S +F+ TV L +QQA +
Sbjct: 2 NGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTN 61
Query: 131 FKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECH 189
FKV + G + W EI + +VLV Q+ L + ++ + ++++I DECH
Sbjct: 62 FKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYVALSSLSVVIIDECH 121
Query: 190 HAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
H +HP+ + M+ F + K+PR+ G+T + G + N+ + LE
Sbjct: 122 HG--TGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEIT---NVATKLKELEITYRG 176
Query: 250 KVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQLAEIKREQYISALS- 305
+ +V D +++E+ V +Y P +++ V +L + E++ +L
Sbjct: 177 NIITVSDTKEMEN------VMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEKFYVSLDL 230
Query: 306 --------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGALHASYILL------- 348
R+ Q LR+ +K+ + +L + + ++ G+ A A L+
Sbjct: 231 MNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVEFDIKR 290
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
ET+ +L+ T+ + + Q + D + ++ EV+ F + K
Sbjct: 291 RQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTE----EVIMN-FSTPK 345
Query: 409 LLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYILQNLKFLASWRCHFLVG 460
+ R + L + K C+VFV R T + L+YI + F+VG
Sbjct: 346 VQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVG 405
Query: 461 VN---AGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
N +S + R KS +++FR G NL++ + V EEG+D+Q C V D +T
Sbjct: 406 RNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFN 465
Query: 517 SFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
++QS+GRAR ++++ F D ++ + I + K + + + DR +E
Sbjct: 466 MYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDR----VLEKTEP 521
Query: 576 RIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD--- 620
+Y++ + +GA + +++LHRYC +P D F P F+ +
Sbjct: 522 ELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 581
Query: 621 --------LGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
G + I +P N + I P +++ AK A KA + L+ LG LN+
Sbjct: 582 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 641
Query: 672 LLP---------------QEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW 716
+P + N D + +D + + E A+ R
Sbjct: 642 FVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPLEFYDALPRVGE 701
Query: 717 TKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEAEHL----KVDLHLA 766
Y + L F + + +Y R + + +++ LP AE + LH+
Sbjct: 702 ICYAYEIFLEPQFESC--EYTEHMYLNLQTPRNYAILLRNKLPRLAEMPLFSNQGKLHVR 759
Query: 767 RGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLL 824
+ + ++ + + QF M + IL + F L + S YL++
Sbjct: 760 VANAPLEVIIQNSEQLELLHQFHGMVFRDIL---KIWHPFFVLDR-----RSKENSYLVV 811
Query: 825 PVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQLHNGWSSESDVENS 880
P+I + DW+++ P + G +V R+ P+ P D E
Sbjct: 812 PLILGAGEQKCFDWELMTNFRRLP--QSHGSNVQQREQQPAPRP----------EDFEGK 859
Query: 881 LV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSYGIHLK---HPKQPL 933
+V YA + K LVT + E S K+ ++ + +S YG + H + +
Sbjct: 860 IVTQWYANYDKPM-LVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDVVHKDKFM 918
Query: 934 LRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
+ + L +L +HNR +++S + L PELC F D+ L LPSI
Sbjct: 919 IEVRDLTEQLTFYVHNRGKFNAKSKAKMKVI--LIPELC--FNFNFPGDLWLKLIFLPSI 974
Query: 993 MHRLENLLVAIELK 1006
++R+ LL A L+
Sbjct: 975 LNRMYFLLHAEALR 988
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 210/473 (44%), Gaps = 112/473 (23%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ERLEILGD+FLK + +L + +EG LT +S V+N NL
Sbjct: 1173 FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNL 1232
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---RICSKETERTI--- 1125
L ++ + F P AL R P +I R +
Sbjct: 1233 LFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRDLALG 1292
Query: 1126 --HSQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D ++EV G + K IAD +EAL
Sbjct: 1293 DEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEAL 1352
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDMAT----- 1214
+G + + G + A L++ I ++ +Q+ N+ + K + A+++
Sbjct: 1353 LGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKK---MRANVNTTEIDGFL 1409
Query: 1215 -----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSV 1267
LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++
Sbjct: 1410 INHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFEN 1469
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM------- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ LSE I+ +V++
Sbjct: 1470 NTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRV 1529
Query: 1321 ------------ITPSS-------------------TREVKEG--PR----------CPK 1337
+ P+ ++E ++G P+ PK
Sbjct: 1530 TNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPK 1589
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
LGD++E+ + A+ LD +L W+++ + +P L+ F+ + +N IR+L+E
Sbjct: 1590 ALGDVLEALIAAVYLDCR-DLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVE 1641
>gi|451850832|gb|EMD64133.1| hypothetical protein COCSADRAFT_142297 [Cochliobolus sativus
ND90Pr]
Length = 1435
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 197/680 (28%), Positives = 313/680 (46%), Gaps = 110/680 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL---IRKPQKSICIFLAPTVA 116
R YQ E+ ++M+ NIIV + TG GKTHIA+ E A KP K + FLAPTVA
Sbjct: 25 RGYQAEMIAESMKANIIVVMDTGSGKTHIAI----ERARAELETCKPDK-LVWFLAPTVA 79
Query: 117 LVQQQAKVIEESI-GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIP--QILLYCLYHR 173
L +QQ +V + ++ G+ CG L + E+ Q+ V +++ QILL L H
Sbjct: 80 LCEQQYEVFQANLPGYGHLLLCGRDVELWTTQRAWNEVFQHNVRIVMSTHQILLDALTHG 139
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKG 229
F+ ++ +ALLIFDE HH +K HP KIM DFY P + +PR+ G++ASPV+
Sbjct: 140 FMSLQKLALLIFDEAHHCTLK--HPAHKIMSDFYMPRLSDRTFVLPRVLGLSASPVMRAA 197
Query: 230 ASAQANLPKSINSLENLLDAKVYS--VEDAEDLESFVSSPVVRV-YQYGPVINDTS---- 282
A+ Q + ++E L A V + + +E L S +++V Y P S
Sbjct: 198 ANKQG-----LETIERNLQATVRTPKLYRSELLRSVHRPELIQVNYTREPSTGSPSMLLL 252
Query: 283 ---SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK-FCLENLGVC 338
S YV ++ + Y+ AL L + N ++QL +L DS K +C + L
Sbjct: 253 ALKSVYVNY-----DLMEDPYVLAL---LEQQKDGCNVSRQLQKLWDSRKSYCYDQLKQ- 303
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
L+S E M EL GN+ ++ + Q F + G + DLS E
Sbjct: 304 --------LVSKAEAMAQEL----GNS---AMEHYVYQCVNGFQNLVH--GQSCDLSTDE 346
Query: 399 V--LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS--W- 453
L F GI S+ K V ++ IV A + L F+ W
Sbjct: 347 KRHLLNIFQRLPTQHTTGISSSILESLSHKVNVLIDIIVVEAATNLNFTGLVFVEQRVWV 406
Query: 454 -------------RCHFLVGVNAGLKSMSRNA-----------MKSILEKFRSGELNLLV 489
+ +G G S++ +++L+ F++G +NL++
Sbjct: 407 ASLAEILASHPRTKTLLRIGTFVGTSQSSQHKSSIFNYANLKNQQTVLDDFKAGIINLVL 466
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV-DSGNQRELDLIK 548
T V EEG+D+ +C LV+ F+ P+T+ F+Q RGRAR +S Y LV D G+
Sbjct: 467 TTSVLEEGIDVPSCHLVVCFEAPKTLKGFVQRRGRARQQRSRYYILVPDMGDAYT---SA 523
Query: 549 NFSKEEDRMNREIMDRTSSDAFTCSEE-------RIYKVDSSGACISAGYGVSLLHRYCS 601
++ E +M + D A + +E R +++++GA ++ + L+ +C+
Sbjct: 524 SWQSLEAQMRKAYEDDERQTALSFEKEYIEEYDSRCLRIETTGALLTLDNAMQHLYHFCA 583
Query: 602 KLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPI--HQIVGTPQSSM-----EAAKKDA 654
+L + + +P+F F ++ G I A+ PI V T SS A+KDA
Sbjct: 584 RLSSGTYVDARPEF-DFTNVNGQIS---AKASLPICVDLTVRTANSSRTWKTERMAQKDA 639
Query: 655 CLKAIEDLHKLGALNDYLLP 674
+A + L+ G +N+ LLP
Sbjct: 640 AFEAYKTLYIAGLVNENLLP 659
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 180/409 (44%), Gaps = 75/409 (18%)
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEIL 1045
SL PSI H+LE +VA L+ + S ++S ++L ALT + +RLE L
Sbjct: 918 SLFPSITHKLETYMVANALRTTVLQSV--NIDISHLPIILLALTPSAVDGEENYQRLEFL 975
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD LK+ HL H + EG LT ++S V+N L + A L +I + F +
Sbjct: 976 GDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYLARAALAKGLDEFILYKRFTGAK 1035
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ PR S+ T N + K K IADV+E+L+GA
Sbjct: 1036 W------KPRYVSQVLAIT-------------NPPAKQEKS-----SKLIADVIESLIGA 1071
Query: 1166 FIDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEIL 1218
GF A A +K W+ I Q + ++ + + + +E L
Sbjct: 1072 SYVVGGFSKAFACVKALLPLEDWMPI------PQANDTLYNAAP--EQDSVMGVIPVENL 1123
Query: 1219 LGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQL 1276
+GH F ++ +LL+A HP+F L Y+R EFLGDAVLDY+++ LYS P+L ++
Sbjct: 1124 VGHIFNNKAMLLEALTHPTFRGLNTHCSYEREEFLGDAVLDYIVSKRLYSHRPELPHHKM 1183
Query: 1277 TDLRSMLVN-------------NQAFANVAVDQ------SFYKFLIFDSNVLSETIN--- 1314
+R+ +VN + F N Q + ++FL S+ L + N
Sbjct: 1184 HGIRTAMVNASFLAYSMFETTVEEIFTNKETLQPETHQRALWQFLRSTSHELVMSRNLAI 1243
Query: 1315 ---NYVDYMITPSSTREVKEGPRC------PKVLGDLVESSLGAILLDS 1354
+ IT + + + PK L D+VES +GA+ +DS
Sbjct: 1244 RRHSEARIQITEALQHDARFPWHALSLTDPPKFLSDIVESMIGALYIDS 1292
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGD +L ++ + +L + + ++ G LT +S LV+N A A+ + +F+++
Sbjct: 969 YQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYLARAALAKGLDEFILY 1028
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
++ YV ++ ++ +E + K++ D++ES +GA + GF+
Sbjct: 1029 KRFTGAKWKPRYVSQVLAITNPPAKQE--KSSKLIADVIESLIGASYVVGGFS 1079
>gi|195023643|ref|XP_001985724.1| GH20958 [Drosophila grimshawi]
gi|193901724|gb|EDW00591.1| GH20958 [Drosophila grimshawi]
Length = 1713
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 172/677 (25%), Positives = 297/677 (43%), Gaps = 79/677 (11%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI------CIFLA 112
AR YQL + + + N I+YL TG GKT++A+L L + KSI +FL
Sbjct: 3 ARDYQLRIVEYIAKRNGIIYLPTGSGKTYVAIL---ALKRFSQNFDKSIEEGGQRALFLC 59
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGG---SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
TV L +QQA + FKV + G ++S W EI +VLV Q++L
Sbjct: 60 NTVELARQQAVFVRRYTNFKVGFYVGEVGVDNWVRSK--WTDEIRDNQVLVGTAQVILDM 117
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVG 227
+ + ++ ++++I DECHH +HPY + M+ F + + +PR+ G+T V+
Sbjct: 118 ALQKHLDLKSVSIVILDECHHG--TGHHPYHEFMRLFQMAQANATPLPRVVGLTG--VLI 173
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
KG + N+ K + LE+ + +V D +++E+ V + +Y ND + ++
Sbjct: 174 KGNEIK-NVAKKLKELESTYLGNIVTVSDMKEMEN-VMLHSTKPREYLVAYNDRNQTFEV 231
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK------------FCLENL 335
E + I Y+ +L +Q +R +K L+ DS K + L+N
Sbjct: 232 IEEIRSLIL--SYLKSLDLITIPNQPVR-MSKGLHVQRDSNKKSVIKLMLNDFLYQLDNY 288
Query: 336 GVCG---ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
G+ A+ + Y ++ + LC + + D
Sbjct: 289 GIYAGSIAILSMYAEFDIKRRQSETIVMRNTYRLVVGLC---DRIRHMLVNQLTDDDEDE 345
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKF 449
+ E + F + K+ R + L ++ K C+VFV R T + + +L LK+
Sbjct: 346 KAANTEEVIMNFSTPKVQRFLQYLKDTFANKNPKDICCLVFVERRYTCKCIYGLL--LKY 403
Query: 450 LAS-------WRCHFLVGVNAGL----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGL 498
+A+ F+VG N + R ++S +++FR GE N++V + V EEG+
Sbjct: 404 IAAVPELRNVLAPQFMVGRNGIFLDFESVLERRWLRSAIQQFRDGEANMMVCSSVLEEGI 463
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDRM 557
D+Q C V+ D +T ++Q++GRAR + + N+ ++ L I+ + + +
Sbjct: 464 DVQACNYVMILDPIKTFNMYVQTKGRARAKDASFVLFSSELNKPKISLQIQQYRQAHVEI 523
Query: 558 NREIMDRT--SSDAFTCSEERIYK------VDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
+ DR SD ++ V+ +GA + A + L+HRY ++P D F
Sbjct: 524 REYLKDRVLERSDPKMDEIREHFQDQIKPYVNQNGAVLLASSALMLIHRYVQQMPTDAFG 583
Query: 610 NPKPKFYYFD----------DLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKA 658
P F D G + + LP N+ + I P + AK A KA
Sbjct: 584 TVLPWFKLLDPNERRELTQNSQGKYVVSLNLPLNSALRDTIYSDPMPNGHWAKISAAFKA 643
Query: 659 IEDLHKLGALNDYLLPQ 675
LH+LG LN+ LP+
Sbjct: 644 CIKLHELGELNERFLPK 660
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 212/474 (44%), Gaps = 117/474 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ER E+LGD FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1184 FLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLASKYPKWNEGTLTQVKSTLVSNRNL 1243
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFF------------ALGRRCPRICS------------- 1118
L ++ I F P F+ L ++ P +
Sbjct: 1244 LYCIRDTDIPSRICFTLFTPKYFWLPPCLSLPQNVQQLWQQHPDKAALVGPHNLRNLTMS 1303
Query: 1119 --------KETERTIHSQYDG--------RAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
K E T +S D A D ++EV G + K +AD +EAL
Sbjct: 1304 EEEVFGNGKCAESTYNSFLDSCRANQQTHNAGMDFSSEVDFCVGQVKMPNKVLADTLEAL 1363
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G I + G + L++ GI ++ ++Q+ TNI FL
Sbjct: 1364 LGVIIKNYGLQHGFRMLEYFGICKPDIGKPLTQLLDLQLGSTQLRTNITKREVDEFL--- 1420
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ + LE LG+ F R LLQA HPS NRL GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1421 --INHSALEHNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFVGDAILDFLISAYIF 1478
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT--- 1322
++ PGQLTDLRS LVNN A + V + F++ ++ +LS++I N+V + T
Sbjct: 1479 EHKTRMTPGQLTDLRSALVNNTTLACICVRHRIHFFILAENAMLSDSIQNFVRFQETQNH 1538
Query: 1323 --------------------------------------PSSTREVKE----------GPR 1334
P+ T + K+
Sbjct: 1539 RVTNQVRILMEESDLMPGPLDSDDELEMAEADEQQASQPAITADTKKPEVGEYNISTNVD 1598
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFS-NLQLNPIREL 1386
PK LGD++E+ + AI LD +LNT W+++ +P +L+FS N+ LNPIR+L
Sbjct: 1599 VPKTLGDVLEALIAAIYLDCR-DLNTTWQVVYKLFEPELLEFSRNVPLNPIRQL 1651
>gi|336378007|gb|EGO19166.1| hypothetical protein SERLADRAFT_443209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1489
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 204/768 (26%), Positives = 330/768 (42%), Gaps = 132/768 (17%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ +++ NII+ TG GKT IA+L + A +P K + FLAPTVAL
Sbjct: 19 TRGYQQEMLDASLKGNIIIAQDTGSGKTRIAILRMKIEAEC--EPNK-VSWFLAPTVALC 75
Query: 119 QQQAKVIEESIGFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQQA VI+ + V G + + K W + ++ +LV PQ+LL L H +I
Sbjct: 76 QQQADVIKLDLPVSVGMISGACEPIQWKESALWRGVLQRHRILVTTPQVLLDALRHGYIN 135
Query: 177 M-ELIALLIFDECHHAQVKSNHPYAKIMKDFY------KPDIMKV-------------PR 216
+ I LLIFDE HHA NHPY IMK+FY + D+ P
Sbjct: 136 LGRDIGLLIFDEAHHA--TDNHPYNCIMKEFYFKLPVRQSDLDDAISRGVQRKFRNERPM 193
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVED-------------------- 256
+ G+TASP+ G Q + LE+ LD + S +
Sbjct: 194 VLGLTASPIF--GGDPQ----HAFRVLESNLDGIIRSPQQNRQELAKFVHRPIFRHVLYN 247
Query: 257 --AEDLESFVSSPVVRVYQYGPVINDTSSSYVTC-SEQLAE-------IKREQYISAL-- 304
A D++ F+S ++ + Q +N Y++ EQLA+ I+ +Q +S
Sbjct: 248 APASDIQ-FMSCNLMGLNQVISGMNIEEDPYISSLREQLAKSAPGPERIRIDQKLSKTLQ 306
Query: 305 SRKLHDHQSLRN--TTKQLNRLHDSMKFCLENLGVCGALHASYILLSG--DETMRNELIE 360
S+ + H+ LR+ TT Q C + + + ++ +ET + +I
Sbjct: 307 SKSSYTHKGLRDLATTAQ--------DICYDVGPWAADWYIAKVIEKALDNETPFDNIIS 358
Query: 361 AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR 420
+ L Q + + D A ++VL + +K
Sbjct: 359 VWQDKEKRYLLDHLRQVVVMPTSYDAEDVTADASEKVKVLVQSLLDEKAW-------AES 411
Query: 421 LQQHMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVGVNAG---------LKSMSR 470
+ IVFV R AL+ +L + + +R L+G + +++ +
Sbjct: 412 HNEPYSGIVFVTRRDVVLALTEVLAHHPETSQRFRVGCLLGSSDSAYRRSFLDITRTLLK 471
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ + L FRSG++NL++AT V EEGLDIQ C VIR+D P +AS+ QSRGRAR +S
Sbjct: 472 QSQANTLLDFRSGDINLIIATAVAEEGLDIQACGNVIRWDAPNNMASWAQSRGRARRERS 531
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMD-RTSSDAFTCSEERI--------YKVD 581
+ + +G+ + ++K E+ M+ D R + + ++E ++V+
Sbjct: 532 SFVLMFQAGSDDKQQVMKWEQLEKQMMDLYSNDQRDTGNTHDENDESTLDDHGDLEFQVE 591
Query: 582 SSGACISAGYGVSLLHRYCSKLP------HDEFFNPKPK-----FYYFDDL-------GG 623
S+GA +S VS L+ +CS LP H ++ P ++ F+ G
Sbjct: 592 STGALLSLQSAVSHLNHFCSILPNSYRVSHLPIYDIDPPDMPEGWHSFEHKSNVPPYPGP 651
Query: 624 TICHIILPANAPIHQIVGTPQS---SMEAAKKDACLKAIEDLHKLGALNDYLLPQ----E 676
C + LP P V + + S ++A + A L+ LND LLP E
Sbjct: 652 FGCTVTLPRLLPSELRVFSVKREYPSKQSAIQHVAFNAYLALYNAKLLNDNLLPLTSVIE 711
Query: 677 DNATEDEPMLFSSDSDSYEGEGS-RGELHEMLVPAVLRQSWTKSQYPV 723
+N E+ L D + G + RG+L + +P + W ++ V
Sbjct: 712 ENLEEEVKALL-RDVEKRSGTATVRGQL-DPWIPTKINNKWWSTELVV 757
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 210/480 (43%), Gaps = 66/480 (13%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
P++ A+PL R N L R L S S E+ LP +++ S +LPS
Sbjct: 934 PVIVAEPLPRRANFLLTRGL--SSSAPAEKTVLLLP---RYTRVVLLSPAETEYAQILPS 988
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
I+ L + I L+ L P +++ +L ALT Q + ERLE LGD LK
Sbjct: 989 IIRHLSVMTTVISLRDTLFTGTPL-SKIPLPLLTTALTAPVSQGLINYERLETLGDGVLK 1047
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
+ V HL EG LTRR+ + V+N+ L K A L +I F P ++
Sbjct: 1048 FIVSIHLMAAFPHWHEGYLTRRKDHGVSNAQLAKNAVLKKLYRWIIRDRFTPRKW----- 1102
Query: 1112 RCPRICS-KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDS 1170
PR C+ + E I + + D + + L K +ADVVE+L+GA +
Sbjct: 1103 -TPRYCTPPQNEDQIKEEVEVEGSDSRKSRAVIEE----LSTKMLADVVESLIGAAYEHG 1157
Query: 1171 GFKAATAFLKWIGIQVEF----EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
GF K+ G+ +E+ + + + + P + +E++LG+ F +
Sbjct: 1158 GFDLGIECAKFFGLGLEWWGLAKCVETALSVVETTDDFPAQVT----DVELMLGYNFTRK 1213
Query: 1227 GLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK-LKPGQLTDLRSML 1283
LL++A H S F+ Y+R+EFLGD++LD +IT YLY V K PG + +S +
Sbjct: 1214 LLLIEALTHASHQFDTRTVSYERMEFLGDSILDMIITDYLYHVPGKGYSPGHMHMRKSSV 1273
Query: 1284 VNNQAFA------NVAVDQS--------------------FYKFLIFDSN-VLSETINNY 1316
VN A ++ VD S ++ L+ S+ +L + +
Sbjct: 1274 VNTHFLAFICLRNSLKVDTSMPGPNHEGRITLNTQSQEIYLWQCLLHSSHTILEDQKTTF 1333
Query: 1317 VDYMITPSSTREVKEGP-----------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
Y + + + + PK D++ES +GA LDSG N+N V +I+
Sbjct: 1334 SRYNKVKAQIEDALQNDSIFPWAALTKLQAPKFFSDMIESLIGAAYLDSGGNINVVREIL 1393
>gi|336365445|gb|EGN93795.1| hypothetical protein SERLA73DRAFT_115225 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1493
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 204/768 (26%), Positives = 330/768 (42%), Gaps = 132/768 (17%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ +++ NII+ TG GKT IA+L + A +P K + FLAPTVAL
Sbjct: 23 TRGYQQEMLDASLKGNIIIAQDTGSGKTRIAILRMKIEAEC--EPNK-VSWFLAPTVALC 79
Query: 119 QQQAKVIEESIGFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQQA VI+ + V G + + K W + ++ +LV PQ+LL L H +I
Sbjct: 80 QQQADVIKLDLPVSVGMISGACEPIQWKESALWRGVLQRHRILVTTPQVLLDALRHGYIN 139
Query: 177 M-ELIALLIFDECHHAQVKSNHPYAKIMKDFY------KPDIMKV-------------PR 216
+ I LLIFDE HHA NHPY IMK+FY + D+ P
Sbjct: 140 LGRDIGLLIFDEAHHA--TDNHPYNCIMKEFYFKLPVRQSDLDDAISRGVQRKFRNERPM 197
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVED-------------------- 256
+ G+TASP+ G Q + LE+ LD + S +
Sbjct: 198 VLGLTASPIF--GGDPQ----HAFRVLESNLDGIIRSPQQNRQELAKFVHRPIFRHVLYN 251
Query: 257 --AEDLESFVSSPVVRVYQYGPVINDTSSSYVTC-SEQLAE-------IKREQYISAL-- 304
A D++ F+S ++ + Q +N Y++ EQLA+ I+ +Q +S
Sbjct: 252 APASDIQ-FMSCNLMGLNQVISGMNIEEDPYISSLREQLAKSAPGPERIRIDQKLSKTLQ 310
Query: 305 SRKLHDHQSLRN--TTKQLNRLHDSMKFCLENLGVCGALHASYILLSG--DETMRNELIE 360
S+ + H+ LR+ TT Q C + + + ++ +ET + +I
Sbjct: 311 SKSSYTHKGLRDLATTAQ--------DICYDVGPWAADWYIAKVIEKALDNETPFDNIIS 362
Query: 361 AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR 420
+ L Q + + D A ++VL + +K
Sbjct: 363 VWQDKEKRYLLDHLRQVVVMPTSYDAEDVTADASEKVKVLVQSLLDEKAW-------AES 415
Query: 421 LQQHMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVGVNAG---------LKSMSR 470
+ IVFV R AL+ +L + + +R L+G + +++ +
Sbjct: 416 HNEPYSGIVFVTRRDVVLALTEVLAHHPETSQRFRVGCLLGSSDSAYRRSFLDITRTLLK 475
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ + L FRSG++NL++AT V EEGLDIQ C VIR+D P +AS+ QSRGRAR +S
Sbjct: 476 QSQANTLLDFRSGDINLIIATAVAEEGLDIQACGNVIRWDAPNNMASWAQSRGRARRERS 535
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMD-RTSSDAFTCSEERI--------YKVD 581
+ + +G+ + ++K E+ M+ D R + + ++E ++V+
Sbjct: 536 SFVLMFQAGSDDKQQVMKWEQLEKQMMDLYSNDQRDTGNTHDENDESTLDDHGDLEFQVE 595
Query: 582 SSGACISAGYGVSLLHRYCSKLP------HDEFFNPKPK-----FYYFDDL-------GG 623
S+GA +S VS L+ +CS LP H ++ P ++ F+ G
Sbjct: 596 STGALLSLQSAVSHLNHFCSILPNSYRVSHLPIYDIDPPDMPEGWHSFEHKSNVPPYPGP 655
Query: 624 TICHIILPANAPIHQIVGTPQS---SMEAAKKDACLKAIEDLHKLGALNDYLLPQ----E 676
C + LP P V + + S ++A + A L+ LND LLP E
Sbjct: 656 FGCTVTLPRLLPSELRVFSVKREYPSKQSAIQHVAFNAYLALYNAKLLNDNLLPLTSVIE 715
Query: 677 DNATEDEPMLFSSDSDSYEGEGS-RGELHEMLVPAVLRQSWTKSQYPV 723
+N E+ L D + G + RG+L + +P + W ++ V
Sbjct: 716 ENLEEEVKALL-RDVEKRSGTATVRGQL-DPWIPTKINNKWWSTELVV 761
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 210/480 (43%), Gaps = 66/480 (13%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
P++ A+PL R N L R L S S E+ LP +++ S +LPS
Sbjct: 938 PVIVAEPLPRRANFLLTRGL--SSSAPAEKTVLLLP---RYTRVVLLSPAETEYAQILPS 992
Query: 992 IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
I+ L + I L+ L P +++ +L ALT Q + ERLE LGD LK
Sbjct: 993 IIRHLSVMTTVISLRDTLFTGTPL-SKIPLPLLTTALTAPVSQGLINYERLETLGDGVLK 1051
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
+ V HL EG LTRR+ + V+N+ L K A L +I F P ++
Sbjct: 1052 FIVSIHLMAAFPHWHEGYLTRRKDHGVSNAQLAKNAVLKKLYRWIIRDRFTPRKW----- 1106
Query: 1112 RCPRICS-KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDS 1170
PR C+ + E I + + D + + L K +ADVVE+L+GA +
Sbjct: 1107 -TPRYCTPPQNEDQIKEEVEVEGSDSRKSRAVIEE----LSTKMLADVVESLIGAAYEHG 1161
Query: 1171 GFKAATAFLKWIGIQVEF----EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
GF K+ G+ +E+ + + + + P + +E++LG+ F +
Sbjct: 1162 GFDLGIECAKFFGLGLEWWGLAKCVETALSVVETTDDFPAQVT----DVELMLGYNFTRK 1217
Query: 1227 GLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK-LKPGQLTDLRSML 1283
LL++A H S F+ Y+R+EFLGD++LD +IT YLY V K PG + +S +
Sbjct: 1218 LLLIEALTHASHQFDTRTVSYERMEFLGDSILDMIITDYLYHVPGKGYSPGHMHMRKSSV 1277
Query: 1284 VNNQAFA------NVAVDQS--------------------FYKFLIFDSN-VLSETINNY 1316
VN A ++ VD S ++ L+ S+ +L + +
Sbjct: 1278 VNTHFLAFICLRNSLKVDTSMPGPNHEGRITLNTQSQEIYLWQCLLHSSHTILEDQKTTF 1337
Query: 1317 VDYMITPSSTREVKEGP-----------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
Y + + + + PK D++ES +GA LDSG N+N V +I+
Sbjct: 1338 SRYNKVKAQIEDALQNDSIFPWAALTKLQAPKFFSDMIESLIGAAYLDSGGNINVVREIL 1397
>gi|194755862|ref|XP_001960198.1| GF13246 [Drosophila ananassae]
gi|190621496|gb|EDV37020.1| GF13246 [Drosophila ananassae]
Length = 1727
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 226/517 (43%), Gaps = 126/517 (24%)
Query: 977 GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQER 1036
GF + +S L + + N +H+ +A E L A+TT +
Sbjct: 1172 GFKPQVHQDVSYLSILQKSMSN-------EHITAAEQSE--------FLAAITTSGSADV 1216
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
F +ERLE+LGD+FLK + +L + +EG LT+ +S V+N NLL + ++ I
Sbjct: 1217 FDMERLEMLGDSFLKMSGSLYLANRYADWNEGTLTQVKSKLVSNRNLLYCLSETDIPTRI 1276
Query: 1097 RDQPFDP-CQFFALGRRCPR--------------------------------ICSKETER 1123
F P + G PR I +E
Sbjct: 1277 SSSLFTPKYTWIPPGVSLPRNVLALWNNKPDVAKLVGPHNLRDLTLTDEESLITGTCSES 1336
Query: 1124 TIHSQYDG--------RAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
T+ + DG A D +AE+ G + K +AD +EAL+G + + G
Sbjct: 1337 TLSTFMDGCRKNMSSHHADTDFSAELNFCIGRANIADKVVADTLEALLGVVVKNYGLTHG 1396
Query: 1176 TAFLKWIGI-QVEFE-------------ASQVTNICISS-KSFLPLSASLDMATLEILLG 1220
L++ GI + + A+ TN+ + SFL ++ A LE LG
Sbjct: 1397 FRMLEYFGICKADIGKPLTQLLDLRLGGANMRTNVSTTEIDSFL-----INHANLEQNLG 1451
Query: 1221 HQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ F RG LLQA HPS+ NR+ GCYQ+LEF+GDA+LD+LI+ Y++ K+ PGQLTD
Sbjct: 1452 YTFKDRGYLLQALTHPSYPTNRITGCYQQLEFIGDAILDFLISGYIFENNTKMTPGQLTD 1511
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS-------------- 1324
LRS LVNN A + V + F++ ++ +LSE I ++V + T +
Sbjct: 1512 LRSALVNNTTLACICVRHKIHLFILAENALLSEAIASFVQFQETQNHRVTNHVRILLEEN 1571
Query: 1325 -----------STREVKEGPR--------------------CPKVLGDLVESSLGAILLD 1353
+ E+ E PK LGD++E+ + A+ LD
Sbjct: 1572 DTTPLDVDGEVKSMEIDETTESEENNGVPTKGDYNMSQNVDVPKALGDVLEALIAAVYLD 1631
Query: 1354 SGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
+L+ W+++ + P +K N+ +NPIR+L E
Sbjct: 1632 CR-DLHRTWQVIYNLFKPEIKEFTRNVPINPIRQLNE 1667
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 246/1048 (23%), Positives = 417/1048 (39%), Gaps = 136/1048 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L +N I+YL TG GKT +A+L + + + K + IF+ TV
Sbjct: 14 RSYQLRLVDHITRQNGIIYLPTGSGKTFVAILALKRFSQDMDKTIEDGGKRAIFMCNTVE 73
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA I+ KV + G WE EI +V+V Q++L R +
Sbjct: 74 LARQQAVAIKRFTNLKVGFYVGEQGVDDWPRGQWETEIRDKQVMVGTAQVMLDVFTQRHM 133
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+++ ++++I DECHH +HP+ + M+ F ++PR+ G+T V+ KG + N
Sbjct: 134 ELKSVSIVIIDECHHG--TGHHPFHEFMRLFLYGSSNELPRVVGLTG--VLIKGNEVK-N 188
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFV---SSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+ + + LE + +V D DLE+ + + P + QY S +
Sbjct: 189 VARRLKDLETTYRGNIITVSDTADLENVMLHSTKPKEYMIQYPAQCQKYS--------LV 240
Query: 293 AEIKRE--QYISAL---------SRKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCG 339
A+++R + + L R+ +LR+ K+ + L + KF + GV
Sbjct: 241 ADVERMIFNFFAVLDQLDIGVQPQRRSKGLMNLRDPHKKSAIKALFNDFKFQMVEYGVYA 300
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR-----RDGIASDL 394
A A L E + + T+ + Q + R D
Sbjct: 301 ASIAIVSLSVEFEVKKRQAETISLKTMYRAAISMCDQIRHILVRKLRDLVDDDDETDEKT 360
Query: 395 SCIEVLKEPFFSKKLLRLIGIL-STFRLQQ--HMKCIVFVNRIVTAR-----ALSYILQN 446
+ E++ F + K+ R + L TF +Q + C+VFV R TA+ L +I
Sbjct: 361 NTYEIIMN-FSTPKVQRFLQYLKQTFAGKQPKDICCLVFVERRYTAKCIFGLVLHFIQAT 419
Query: 447 LKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ F+VG N+ + + KS +++FR GE NL++ + V EEG+D+Q
Sbjct: 420 PELRDVLVPQFMVGRNSISQDFESVLEGKFQKSAIQQFRDGEANLMICSSVLEEGIDVQA 479
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD-LIKNFSKEEDRMNREI 561
C V+ D +T ++Q++GRAR ++ + N E+ I + + ++ +
Sbjct: 480 CNYVLILDSLKTFNMYVQTKGRARSKEAVFIIFSADANTGEVSKQIGQYRQAHSDISEYL 539
Query: 562 MDRTSSDAFTCSEERIYKV--------DSSGACISAGYGVSLLHRYCSKLPHDEF----- 608
R A E + G+ + A + LLHRYC LP D F
Sbjct: 540 KGRVLERALPLPNEITEHFQDIIPPFKNEHGSILLASNALILLHRYCQSLPSDAFGFVVP 599
Query: 609 ----FNPKPKFYYFDDLG--GTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIED 661
PK + F + I+LP + + I P +++AK A A +
Sbjct: 600 WINLVEPKERVKRFGKSAEYKQVVSIVLPLTSSLKDTIYSYPMDCVKSAKVSAAFNACKL 659
Query: 662 LHKLGALNDYLLP----QEDNATED----------EPMLFSSDSDSYEGEGSRGELHEML 707
L++LG L + LP + A D + + +S + R E
Sbjct: 660 LYELGELGEKFLPITAKERVAAIADVHFEHWKKYGDDVTKTSKEKENQVRTYRTGCPEEF 719
Query: 708 VPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIY------REFGLFVKSLLPGEAEHL-- 759
+ A+ R Y + L +F + D + +Y R + L +++ LP AE
Sbjct: 720 MDAMPRVGEVCYAYEIFLEPHFER--NDYTEHVYDNLQTPRNYALLLRNKLPRLAEMPLF 777
Query: 760 --KVDLHLARGRSVMTKLVPSGIMQA--QQFQEMFLKVILDRSEFNSEFVPLGKDDYCES 815
+ LH+ ++ S I QQF + IL + F L +++
Sbjct: 778 CNQGKLHVRVASEPREIVLDSDIKVELLQQFHVTIFRSILRIWQPFFVFDRLARENS--- 834
Query: 816 SSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQLHNGW 871
YL++P+ +DW ++ + S P SV RK P P
Sbjct: 835 -----YLVVPLAVGAAKAEVIDWPLVTKFQSLP--EVKKSSVQQRKEAPPPCP------- 880
Query: 872 SSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSYGIHLK 927
D E +V Y+ +++ LVT + + YS K+ ++ +S Y H+
Sbjct: 881 ---EDFEGKIVTQWYSNYEEKRMLVTKVHRDLTPYSYMEKNHQDKTYYTFTMSKYSNHIG 937
Query: 928 ---HPKQPLLRAKPLFRLRNL-LHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIG 983
H Q L+ + L N + R ++S + L PEL F D+
Sbjct: 938 DVVHKDQFLIEVRELTEQLNFYVQQRGKSSAQSKARAKVV--LIPELT--FNFDFPGDVW 993
Query: 984 SSLSLLPSIMHRLENLLVAIELKHLLSA 1011
+ LPSI+ RL LL A L+ +A
Sbjct: 994 LKMIFLPSILRRLHFLLHAEALRKRFNA 1021
>gi|302901921|ref|XP_003048541.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
gi|256729474|gb|EEU42828.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
Length = 1381
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 193/663 (29%), Positives = 307/663 (46%), Gaps = 86/663 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ ++++E N+IV + TG GKT +AVL I L + I FL TV+L +
Sbjct: 17 RAYQREMLEQSLERNVIVAMDTGSGKTQVAVLRIQ--VELEKSSPDKIIWFLGKTVSLCE 74
Query: 120 QQAKVIEE---SIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRF 174
QQ KVI+ S+ K+ T G + + W K ++ ++V +IL L H F
Sbjct: 75 QQFKVIQRQNPSVSMKILT---GQLNIDAWSPEVWPKILNGTRIVVSTFEILHDALTHGF 131
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGAS 231
+KM +++L++FDE H+ +S+ KIM +FY D + VP I G+TASPV+ +
Sbjct: 132 VKMSMLSLIVFDEVHNCVKRSSG--RKIMLNFYHEDKNAGLPVPAILGLTASPVISSDLA 189
Query: 232 AQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVR-VYQYGP------VINDTS 282
SI +LEN +DA +V E L+ +VR VY+Y ++
Sbjct: 190 -------SIETLENTMDAICTTPTVHREELLQCVNKPHLVRSVYEYKKRSELTNLMRALH 242
Query: 283 SSY----VTCSEQLAEIKREQYISALSRKLHDHQSLRNTT---KQLNRLHDSMKFCLENL 335
++Y +T ++ R + L R L D +RN T Q+ L + + LE L
Sbjct: 243 TAYQNMDITTDPEVLRFSRCRNEENLKR-LRD-AIMRNDTFSQNQMKGLWNRSRVILEEL 300
Query: 336 GVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLS 395
G A Y+ + LI + +D ++++ A R I+S
Sbjct: 301 GSWAA--DRYV---------SRLIADFLSRVDAPDDTWSNENRTYLAGYLRGVPISS--- 346
Query: 396 CIEVLKEP----FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL- 450
+ EP S K +LI L + I+FV TA L +L + +
Sbjct: 347 ---LGNEPPTATDLSHKAAKLIHEL--LAAGDDVVGIIFVKERTTANVLCDLLNSSPPVR 401
Query: 451 ASWRCHFLVGVNAGLKSMSRNAMK-------SILEKFRSGELNLLVATKVGEEGLDIQTC 503
A +R +VG ++ +S ++N + ILE FRSG +NLLVAT V EEG+D+ C
Sbjct: 402 ARYRVGAMVGTSSS-RSRTQNMYEFNNGTSTQILEDFRSGVVNLLVATSVLEEGIDVPAC 460
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEY----AFLVDSGNQRELDLIKNFSKEEDRMNR 559
LV FD T+ SFIQ RGRARM +S+ + L S EL+ ++D+
Sbjct: 461 NLVACFDETTTLKSFIQRRGRARMQESKMIAMESSLTSSRTWEELEEGMKRRYQDDQREL 520
Query: 560 EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY-- 617
E +D + T S Y + SSGA + L +C + ++ + +P++ +
Sbjct: 521 ERLDELARSEQTDS--IYYIIKSSGARLDLDNARQHLEHFCQVVFKADYVDRRPEYIFQK 578
Query: 618 -FDDLGGTICHII--LPANAPIHQIVGTPQSSMEAAK---KDACLKAIEDLHKLGALNDY 671
++LG + + LP+ P + SS ++ K KDA +A L + G +++
Sbjct: 579 EQNELGEDMLRAVLTLPSGLPANLRKFRSSSSWKSEKNAMKDAAFRAYVALIEEGLVSEN 638
Query: 672 LLP 674
LLP
Sbjct: 639 LLP 641
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 155/313 (49%), Gaps = 32/313 (10%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEILG 1046
L+PSI+H + LVA EL S + + ++ +++L+A+++ E ERLE LG
Sbjct: 888 LIPSIIHEIGVQLVASEL----STTLLQPVNINDLQLVLEAISSRSAHEPVDYERLEFLG 943
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LKY + H EG L + V+N L + + L +I + F
Sbjct: 944 DSILKYCTVIQAYAEHPLWPEGLLVPFKDQLVSNKRLHRACLESGLSKFILSKAF----- 998
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
R S + + ++ D P++ + GH K +ADVVEAL+GA
Sbjct: 999 ------TGRSYSGKKWKPLY--LDDFLPEESVEPLDRITGH-----KNLADVVEALIGAS 1045
Query: 1167 IDDSGF-KAATAFLKWIGIQVEF-EASQVTNICISSK-SFLPLSASLDMATLEILLGHQF 1223
D G KA ++G + + EA + +I +S +PL +L+ LE L+G+ F
Sbjct: 1046 FQDGGMDKALKCISVFLGDKCHWHEAGRGRDILFNSALDGVPLPPTLE--PLEELIGYSF 1103
Query: 1224 LHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
+ LL++A H S+ + Y++LEFLGDAVLDY+I + +++V P L L +++
Sbjct: 1104 RKKSLLIEAVTHGSYAGDTHQRSYEQLEFLGDAVLDYIIVTKVFNVKPPLPHSDLHLIKT 1163
Query: 1282 MLVNNQ--AFANV 1292
+VN + AF N+
Sbjct: 1164 AMVNGEFLAFVNL 1176
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
Y+RLEFLGD++L Y Y+ +P G L + LV+N+ ++ KF++
Sbjct: 936 YERLEFLGDSILKYCTVIQAYAEHPLWPEGLLVPFKDQLVSNKRLHRACLESGLSKFILS 995
Query: 1304 --FDSNVLSETINN--YVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F S Y+D + P + E + K L D+VE+ +GA D G +
Sbjct: 996 KAFTGRSYSGKKWKPLYLDDFL-PEESVEPLDRITGHKNLADVVEALIGASFQDGGMD 1052
>gi|353236820|emb|CCA68807.1| hypothetical protein PIIN_02669 [Piriformospora indica DSM 11827]
Length = 1466
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 221/483 (45%), Gaps = 73/483 (15%)
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PELC I S +LSLLPSIM R+E+ L+ EL + + E+ L A
Sbjct: 896 PELCSKFTIPAS--TMRTLSLLPSIMKRVEDTLLVRELNAMYFNN-----EIDESALQAA 948
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
+T ERLE+LGDA+LKY +LF+ + EG L R ++N LL A
Sbjct: 949 ITAPSASMEVDYERLELLGDAYLKYLSSIYLFVTNPNKHEGILHLARQKIISNRALLVNA 1008
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDG---------RAPDDLN 1138
++ L YI+ +PF P + G R K T H + G R+ D N
Sbjct: 1009 DKSGLPQYIQSKPFLPKMWLPRGYTVVRPEPKST--ATHKESRGNTNMEIKEERSSPDPN 1066
Query: 1139 A------------------EVRCSKG-----HHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
+++ K H WL K +ADV EA++GA G
Sbjct: 1067 GLPTSANEDKSLTIKADEQKLKSKKSLYDEDHQWLGDKCVADVAEAIIGAAFQTGGPSLG 1126
Query: 1176 TAFLKWIGIQVEFEASQVTNICISSKSFLP-LSASLD---MATLEILLGHQFLHRGLLLQ 1231
+K + + + F S + + +K+ P L+ +L+ + T+E +G +F +L Q
Sbjct: 1127 LKVVKSLHLPLPFIESW-DDFSLKAKAPPPDLTITLEDNVLETVEATVGAKFHRPHILAQ 1185
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
A H S N + CY+RLEFLGDAVLD+L+ +++ ++ +L PG LT L+ +V+N A
Sbjct: 1186 ALTHTSARGNDMT-CYERLEFLGDAVLDFLVIQHIFDLHGRLTPGALTMLKGAMVSNSAL 1244
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITPSSTR-------EVKEGP 1333
A ++V +KFL+ +S + + I+ YV +Y R EV+
Sbjct: 1245 AAISVHYGLHKFLVVESKNVKKAIDEYVPAVEEKQRLEYAAADEEGRLKGQYWLEVEP-- 1302
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI----LKFSNLQLNPIRELLEL 1389
PK + D+VES LGA+ + GF L + + L P + L +P + L EL
Sbjct: 1303 --PKSVADVVESILGALYVSDGFKLTGAQAMYDTLLRPFYDQHISLKTLSHHPTKILFEL 1360
Query: 1390 CNS 1392
S
Sbjct: 1361 FQS 1363
Score = 104 bits (260), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 148/336 (44%), Gaps = 42/336 (12%)
Query: 406 SKKLLRLIGILSTFRLQ-QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL-VGVNA 463
S K+ +L+ IL F+ + +V V R +TA A+ IL+ AS + F+ V
Sbjct: 277 SPKVTKLVQILQCFQQAGDTFRGVVLVRRRITALAIVEILKT----ASEQIPFIRVEALT 332
Query: 464 GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 523
G S S+LE F++G NLL+ATK+ E+GLD+ C VIR+D+ + S+ Q+R
Sbjct: 333 GPWSHENLPQLSLLEDFKNGIYNLLIATKIAEDGLDMPPCTCVIRYDISHSSVSYAQTRA 392
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS---------- 573
A+ ++D + I+ + RM E+ D T A S
Sbjct: 393 MAKGKDCHLILMLDKNSDMGRQTIRGVA----RMPDEVKDWTQRVAINKSGAYPPATISQ 448
Query: 574 EERIYKVDSSGAC---------------ISAGYGVSLLHRYCSKLPHDEFFNPK-PKFYY 617
Y DS G I A VS+++RY + L + K +Y
Sbjct: 449 NTEGYYSDSDGEAHAQAEYIKDPTMSGRIYAEDAVSVIYRYLATLRKGSVEDVKMENVFY 508
Query: 618 FDDLGGT--ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
F + +C ++ P N I + G P S AAK+ AC +A + LH+LG L+ L P+
Sbjct: 509 FTMRASSEHVCTVVFPPNGFIAHVEGPPSVSPGAAKRAACFEACKRLHELGLLSYRLFPR 568
Query: 676 EDNATED-EPMLFSSDSDSYEGEGSRGELHEMLVPA 710
P+ S D E E ++G++ L PA
Sbjct: 569 PREVMRRLRPVAVSIDQ---EVEQTKGDILPSLPPA 601
>gi|296417821|ref|XP_002838549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634492|emb|CAZ82740.1| unnamed protein product [Tuber melanosporum]
Length = 1490
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 162/578 (28%), Positives = 268/578 (46%), Gaps = 94/578 (16%)
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEI----DQYEVLVMI 162
FL P V+L QQ +V++ S+ F G ++ D W++ + + + V+V
Sbjct: 16 FLVPNVSLGNQQYEVLKASLPPVNIQFLSGGDKVDKWSDQEIWDEILGIKDNDHAVVVST 75
Query: 163 PQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFG 219
Q+LL L H F++ME I L++FDE HH HP +IM++FY P + K VP + G
Sbjct: 76 HQVLLDALTHGFVRMEGIGLIVFDEAHHCV--GQHPANRIMQEFYHPRVRKGLEVPAVLG 133
Query: 220 MTASPVVGKGASAQANL-PK-SINSLENLLDAKVYS----------VEDAEDLESFVSSP 267
+TASPVV ++ PK I L N + +V V + E+L V P
Sbjct: 134 LTASPVVKSTPDQLRHVSPKFWIGVLANWVYVRVIETNLNAISRTPVRNREELLRHVHPP 193
Query: 268 VVRVYQYGPVINDTSSSYVTCSEQLA----EIKREQYISALSR-------KLHDHQSLRN 316
V++ Q G ++ S+ S QLA +I+++ YI AL ++ S RN
Sbjct: 194 VLKRIQ-GVATDNVPSAL--DSLQLAWATMDIRQDPYIKALQSANPPDLGRIETTISKRN 250
Query: 317 TTKQ------LNR-LHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDS 369
T Q LN+ H +F ++ C HA ++ + A+ +
Sbjct: 251 TYCQVQMRGLLNKAFHLRKEFGAWSVD-CYLKHA----------IQKAIKFADEEDPESM 299
Query: 370 LCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQH----- 424
+ ++ +I + + D+ IE S K+ +LI +L L +H
Sbjct: 300 WMEWNNEEKRYLKSILSKIAVPRDIGPIE----GRLSDKVEKLIEVL----LGEHKDDGG 351
Query: 425 -MKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVNAGLKSMSRNAMKSI------ 476
++FV + V L+ IL+ + + +R +VGV+ G +R A+ +
Sbjct: 352 KFAGLIFVEQRVGVSILAEILKTDSRTKDIFRVGTVVGVSEG-NGRTRKAIYELVNLKGQ 410
Query: 477 ---LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+E FR+G+ NL+V+T V EEG+DI C LV+ F LP + SFIQ RGRARM +S Y
Sbjct: 411 YETIEDFRAGKKNLVVSTSVVEEGMDIPACRLVVCFSLPPNLKSFIQRRGRARMAKSNYV 470
Query: 534 FLVDSGN---------QRELDLIKNFSKEEDRMNREIMDRT----SSDAFTCSEERIYKV 580
+ + G+ Q E+D+I+ + E ++ E T R +++
Sbjct: 471 LMFNEGDTQGKIDKFKQLEMDMIEEYLDETRKLEAETKTETEDPDEDSILNKGRNRRFQI 530
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF 618
+S+GA ++ VS LH +C+ LP E+ + +P F+ +
Sbjct: 531 ESTGALLTLDSAVSHLHHFCNCLPRGEYMDLRPIFHTW 568
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 235/550 (42%), Gaps = 89/550 (16%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSL-LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEML 1024
L PELC + ++ + S ++ LP I+ R+E +A +L+ L P G S +
Sbjct: 884 LIPELCTVDVVPWKY---SQFAMYLPGIIRRIEMSFIAADLERTLL--HPVGFN-SIPKM 937
Query: 1025 LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
+ AL+ +E +R E LGD+ LK+ +L H EG LTR++ V NS L
Sbjct: 938 VTALSASSARESTDYQRFEFLGDSVLKFLTSVNLLDEHPFWHEGYLTRKKEQMVANSRLA 997
Query: 1085 KLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCS 1144
+ A N L +I F + PR E E +
Sbjct: 998 RAAIDNRLAKWI------ITDIFTGSKWRPRYVISEEEEFPEKK---------------R 1036
Query: 1145 KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKSF 1203
KG L K +ADVVEAL+GA + + A ++ G+ + +++ + T ++ S
Sbjct: 1037 KGPKQLSTKILADVVEALIGAAYLEGNYPKALKVIRAFGLNINWKSLEERTTSLLNRASR 1096
Query: 1204 LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLIT 1261
P + LE L+G+ F H+ LLL+A HPS+ + YQR+EFLGDA+LD ++
Sbjct: 1097 YPEVHLSHLKGLESLIGYHFTHKALLLEAITHPSWESDMTSLSYQRMEFLGDALLDMVVV 1156
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANV----AVDQSFY------------------ 1299
++L+ L + +S +VN A + AVD +Y
Sbjct: 1157 NHLFFSPRNLSHIDMHLYKSSVVNGNFLAYLSLRCAVDAKYYGISQRAQSTEVEIVNKSR 1216
Query: 1300 -----KFLIFD-----------SNVLSETINNYV--------DYMITPSSTREVKEGPRC 1335
KF+ S E + + V DY T S E + R
Sbjct: 1217 KVELWKFIRHQHQQIQHAQKICSKRYEEDLRDSVQAALDYGKDYPWTELSPLESDKSGRN 1276
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLE-L 1389
K L D+VE+ +GA+ +DSG + TV + +L L ++ +P+++L E +
Sbjct: 1277 -KFLSDVVEAIIGAVFIDSGGDFETVQSLAERLGILKVLKRLVADHVDVTHPVKKLGEAV 1335
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK- 1448
+ +Q+ +GG + A + ++K + + A + + +R +A +A K+K
Sbjct: 1336 AANGQGTVQYVQSVEGGGYSC-AVMVNEEKLLSVRAASRSEARTKAAELALSVFMEKVKN 1394
Query: 1449 ---AAGYVPK 1455
AG V K
Sbjct: 1395 ETFPAGTVGK 1404
>gi|380492403|emb|CCF34628.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1362
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 182/670 (27%), Positives = 275/670 (41%), Gaps = 135/670 (20%)
Query: 79 LGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG 138
+ TG GKT +AVL I A + R K I FLAPTV+L QQ V++ I F
Sbjct: 1 MDTGSGKTQVAVLRIR--AEVERTSSKHIVWFLAPTVSLCAQQFAVLQSQIPEVQIKFLS 58
Query: 139 GSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKS 195
G + + D W++ + ++V QILL L H F++ME ++L++FDE H+ KS
Sbjct: 59 GEDNVDAWSDQGTWDEVLHNVRIVVSTYQILLDALSHAFVRMERLSLVVFDEAHNCIGKS 118
Query: 196 NHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVY 252
P +KIM FY + + +P I G+TASP G A + I +LE LDA
Sbjct: 119 --PGSKIMTVFYHEEKRRGHHIPHILGLTASPTFGSKA-------EGIVTLEATLDAVCK 169
Query: 253 S-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDH 311
S DL V P + Y P C E ++
Sbjct: 170 SPTMHRSDLLVCVRKPTMAFVSYQPQ---------ECPELPGSLR--------------- 205
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNEL---IEAEGNTIDD 368
SLR + L+ L D L++ G + R EL +E+ I +
Sbjct: 206 -SLRKVIQSLDILDDPYVLHLQS--------------EGTDRSRRELMAVLESHDTYIQN 250
Query: 369 SLCRFASQASEVFAAIC--------------------------------RRDGIASDLSC 396
+ F QA+ +F I ++ +A LS
Sbjct: 251 QMTSFGRQANLIFRDIGIWATEYYIWVVISRFTAALQSQSTWLDTWKKEEKEYLAMVLSQ 310
Query: 397 IEV-------LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+E + S+K+ LI LS + + + IVF T L ++L + K
Sbjct: 311 VECHCPSEHSINREVLSEKVYTLIEQLS--QDKTDVIGIVFARERATVSVLCHLLASHKL 368
Query: 450 LAS-WRCHFLVGVNA------GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
L +R +VG + + +SR L +FR+G+ NLL+AT V EEG+D+
Sbjct: 369 LRERYRIGAMVGTSQFQARKRDVWDLSRVEDLQSLHQFRTGKTNLLIATSVLEEGIDVPA 428
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM 562
C LV FD P + SFIQ RGRARM +S+ L S ++ KE + M E+
Sbjct: 429 CNLVFCFDNPPNLKSFIQRRGRARMRESKLLMLHSS---------ESIPKEWEAMEAEMK 479
Query: 563 DRTSSDAFTC-----------SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
+ S++ ++ +D +GA + L C L EF +
Sbjct: 480 SQYEEQERELERLQDMEDTEESKDMMFVIDRTGAVLDLDNAKQHLDHLCRILSPGEFIDW 539
Query: 612 KPKFYYFDDLGGTICH----IILPANAPIHQIVGTPQSSMEA---AKKDACLKAIEDLHK 664
+P + + ++LP+ P H Q + ++ A KDA +A DL+K
Sbjct: 540 RPDYIIQKQDTSEAPYLRVTVVLPSYLPSHVRKADSQKAWKSERNATKDAAFQAYVDLYK 599
Query: 665 LGALNDYLLP 674
G +ND LLP
Sbjct: 600 AGLVNDNLLP 609
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 241/543 (44%), Gaps = 97/543 (17%)
Query: 974 KIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEK 1032
K+ S D L+PSI+HR+E LVA EL SA +S ++L A++T
Sbjct: 843 KVDTVSTDYARFGVLIPSILHRIETHLVAREL----SAGLLRPLAISDPALVLTAISTGS 898
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
E + ER+E LGD+ LK++ ++ L+ E L+ ++ V NS L K A ++ L
Sbjct: 899 AAEPTNYERIEFLGDSILKFSTTINVAALNPDWPERLLSFKKDGIVANSTLCKAAIKHGL 958
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
+I +PF + + R I+ D D + R S
Sbjct: 959 DRFILTKPF----------------TGQKWRPIYVD-DVLHRGDEKSTRRIST------- 994
Query: 1153 KTIADVVEALVGAFIDDSGFKAA----TAFLKWIGIQVEFEASQVTNICISSKSFLPLSA 1208
KT+AD+VEAL+GA + D G + A + FL+ I + + Q LP +
Sbjct: 995 KTLADIVEALIGASMIDGGLEKALKCMSIFLQQIKWRTLDDCRQALYDAAPPDVELPST- 1053
Query: 1209 SLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLY 1265
+ LE L+GH+F + LL+Q+ H SF LG GC +RLEF+GD+VLDY+I S L+
Sbjct: 1054 ---LEPLEQLVGHEFKKKALLVQSMTHASFT-LGNTLGCLERLEFIGDSVLDYVIVSRLF 1109
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS---------------------------F 1298
+V P L + L++ +VN ++++QS
Sbjct: 1110 AVTPPLSHQTMHLLKTAMVNGDFLGFLSLEQSVSQDEVVIGGDPTGKEPILRHSRFSLPL 1169
Query: 1299 YKFLIFDSNVLS-ETINNYVDYM-ITPSSTREVKEGPRCP----------KVLGDLVESS 1346
+KF+ S + E + Y + ++ G P K D+ ES
Sbjct: 1170 WKFMRHQSPAIGLEEVKVSKRYAGLRDQIIDSMERGQTYPWALLARMQLRKFYSDIFESL 1229
Query: 1347 LGAILLDSGFNLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLELCN----SYDLDL 1397
LGA+ +DSG +L ++ +L +LD IL+ + L+P EL L + +Y LD+
Sbjct: 1230 LGAVYVDSG-DLEVCARVVERFGILGYLDRILRDNVHALHPKEELGHLADKESVTYVLDV 1288
Query: 1398 QFPSLKKGGK-FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKT 1456
+ +G K +L + V + + ++R E A++ SKLKA KT
Sbjct: 1289 R--QTDEGEKEYLCKVLVGTR----CVVEVDGGVTRDEVKVKAAEAAVSKLKAEKLAAKT 1342
Query: 1457 KSL 1459
+ +
Sbjct: 1343 EGM 1345
>gi|195380844|ref|XP_002049171.1| GJ20897 [Drosophila virilis]
gi|194143968|gb|EDW60364.1| GJ20897 [Drosophila virilis]
Length = 1722
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 180/690 (26%), Positives = 302/690 (43%), Gaps = 72/690 (10%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPTV 115
AR YQL L + N I+YL TG GKT++A+L + +H + + + +F+ TV
Sbjct: 8 ARGYQLRLVEYITRRNGIIYLPTGSGKTYVAILALKRFSHNMDRSIEEGGQRALFICNTV 67
Query: 116 ALVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L +QQA +++ FKV + G G+ + W EI +VLV Q++L +
Sbjct: 68 ELARQQAVYVKKFSNFKVGFYVGEQGTDNW-NRSKWSDEIRDNQVLVGTAQVILDLFLQK 126
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDF-YKPDIMKVPRIFGMTASPVVGKGASA 232
++++ +++ I DECHH +HPY + M+ F + + +PR+ G+T V+ KG
Sbjct: 127 HMELKSVSIAIIDECHHG--TGSHPYHEFMRLFQMQSETSSLPRVVGLTG--VLIKGNEI 182
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFV---SSPVVRVYQYGPVIN---------- 279
+ L K + LE + +V D +++E+ + + P + Y V+
Sbjct: 183 K-QLGKKLKELETTFRGNIVTVSDMKEMENVILHSTKPRECLITYKSVVQRFEVIDNIRC 241
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
+ S Y T L +I + + + + +N K + L+D + F LE+ GV
Sbjct: 242 NIESFYRTLD--LVDIGHQPVRMSRGMRFQREPNKKNAIKLV--LNDFL-FQLESYGVYA 296
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR-----RDGIASDL 394
A +L E R + + ++ A R + +L
Sbjct: 297 GSIAIVSVLVEFEIKRRQAETLSMRNMYRAVITLCESIRHALVAKLRDMLDDEEMPDDEL 356
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKFLA 451
+ EV+ F + K+ + L + K C+VFV R T + + +L L F+A
Sbjct: 357 NSEEVIMN-FSTPKVQSFLHYLKKAFANKEPKDICCLVFVERRYTCKCIYGLL--LNFIA 413
Query: 452 -------SWRCHFLVGVNAGL----KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
S F+VG N+ + R KS +++FR GE N+++ + V EEG+D+
Sbjct: 414 ATPELRNSLFPQFMVGRNSIFLDFESILERRWQKSAIQQFRDGEANMMICSSVLEEGIDV 473
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL-DLIKNFSKEE----D 555
Q C VI D +T ++Q++GRAR S + Q+++ + I + K +
Sbjct: 474 QACNYVIILDPIKTFNMYVQTKGRARSKDSSFILFSSELEQQKISEQIHQYRKAHAEIGE 533
Query: 556 RMNREIMDRTSSDAFTCSE----ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
+ +++RT +E E V+ +GA + A ++LLHRYC ++P D F
Sbjct: 534 YLKDRVLERTDPQMDEMNEHFQDEIQPFVNKNGAVLLASSALALLHRYCQQMPSDAFGIV 593
Query: 612 KPKF----------YYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIE 660
P F + D I I LP N+ + + I P + AK A KA
Sbjct: 594 LPWFKLLEPEEVKKFTSDWQRKHIVSITLPLNSTLREAIYSDPMPCVRWAKISAAFKACI 653
Query: 661 DLHKLGALNDYLLPQEDNATEDEPMLFSSD 690
LH LG LN+ LP N E F D
Sbjct: 654 KLHALGELNERFLPTTVNERVAEIANFHFD 683
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 209/468 (44%), Gaps = 104/468 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T + F +ER E+LGD FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1196 FLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLANKYPDWNEGILTQVKSTLVSNRNL 1255
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRI--------------- 1116
L + ++ I F P AL + P +
Sbjct: 1256 LYCLSETDIPTRICSTLFTPKYTWLPPSLGLPQNVLALWKEKPELAALVGPHNIRNLCIS 1315
Query: 1117 ---------CSKETERTI-----HSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
C + R+ +QY A D ++E+ G + K IAD +EAL
Sbjct: 1316 EEEVFGNGKCGEHVYRSFVDGCQANQYTHHAGMDFSSEINFCVGLVQMPDKLIADTLEAL 1375
Query: 1163 VGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSAS-------LDM 1212
+G + + G + L++ GI + +Q+ ++ + S + ++
Sbjct: 1376 LGVVVKNYGLQHGFRMLEYFGICKSDIGKPLTQLLDLQLGSARMRTNISQREVDGFLINH 1435
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
LE LG+ F R LLQA HPS NRL GCYQ LEF+GDA+LD+LI++Y++ +
Sbjct: 1436 QHLEQNLGYTFRDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHKTR 1495
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS--TRE 1328
+ PGQLTDLRS LVNN A + V F+ F++ ++ +L+E+I ++V + + + T
Sbjct: 1496 MTPGQLTDLRSALVNNTTLACICVRHRFHFFILAENALLTESIQSFVQFQESQNHRVTNH 1555
Query: 1329 VK--------------------------------EGPRCP--------------KVLGDL 1342
V+ G P K LGD+
Sbjct: 1556 VRILMEESDVQPEPLDSDDELELAEAAQQQKLAINGADAPHVGEFNISHNVDVPKALGDV 1615
Query: 1343 VESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFS-NLQLNPIRELLE 1388
+E+ + A+ LD +L T W+++ +P +L+FS N+ LNPIR+L E
Sbjct: 1616 LEALIAAVYLDCR-DLTTTWQVVYRLFEPELLEFSRNVPLNPIRQLFE 1662
>gi|358380675|gb|EHK18352.1| hypothetical protein TRIVIDRAFT_47151 [Trichoderma virens Gv29-8]
Length = 1386
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 178/663 (26%), Positives = 282/663 (42%), Gaps = 68/663 (10%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQ+E+ ++++E N+IV + TG GKT +AVL I + L K I F+APTV+L
Sbjct: 3 ARAYQIEMLEQSLERNVIVAMDTGSGKTQVAVLRIK--SELESCDPKKIVWFMAPTVSLC 60
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ V++ I T G+ + + W + V+V PQ+LL L H +I
Sbjct: 61 TQQKDVLKLQIPAVPMTLLAGNSAINAWGPEIWHTLLGTTRVVVSTPQVLLDALDHAYIT 120
Query: 177 MELIALLIFDECHHAQVKS------------NHPYAKIMKDFYKPDIM---KVPRIFGMT 221
M +ALL+FDE + + +P ++M + Y P VP I G+T
Sbjct: 121 MNHLALLVFDEGKNKTADTVCLIYIAHNCIGKNPGGRVMLNHYHPCKQVGGSVPSILGLT 180
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
A+P S Q+ L + ++L V P +R Y P D
Sbjct: 181 ATP------SIQSQPEDLEALELLLDATCISPTLHRDELLKCVKRPTIRHVIYNPGREDV 234
Query: 282 SSSYVTCSEQL---AEIKREQYISALSRKL--HDHQSLRNTTKQLNR-LHDSMK-FCLEN 334
+ + Q+ +IK + YI L R + ++L ++ + + MK F +
Sbjct: 235 MTPTMRSLNQVYLELDIKEDPYIHYLLRDPTERNKRALAEAIEKYDTYTQNQMKSFRTRS 294
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCR--FASQASEVFAAICRRDGIAS 392
+C L L ++ + L EG D L + + + + RR +
Sbjct: 295 KQICKQLGPWAADLYIEKAISAHLNRVEG---DHELPNQWWIDEEKKYLGQVYRRVNVQP 351
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKFLA 451
+ + S K+ +L ++ ++ I+FV T L+ +L+ N +A
Sbjct: 352 LPKTPQTFDD--ISDKVDKL--LIELLSAEEPTVGIIFVEERATVTMLAELLRVNQAIMA 407
Query: 452 SWRCHFLVGVNAGLKSMSRNAMKSILEK--------FRSGELNLLVATKVGEEGLDIQTC 503
++ + G A + R AM +K FR G++NLL+AT V EEG+D+ C
Sbjct: 408 KYKIGTMFGTAA--YATRRKAMYEFGDKTDYKDLLNFRHGKINLLIATSVLEEGIDVPAC 465
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE------DRM 557
LVI FD P T SFIQ RGRAR S+ + + L K +KEE D
Sbjct: 466 NLVICFDTPTTSKSFIQRRGRARKRDSKLVIFFELESPA---LEKWITKEEEMKKLFDDE 522
Query: 558 NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
RE+ + + + ++ V S+GA + S L +C L EF + +P +
Sbjct: 523 QREVRRLSQLEDSESPSDDVFIVPSTGARLEFDNAKSHLEHFCRVLSPGEFVDSRPDYII 582
Query: 618 FD--DLGGTICHIILPANAPI----HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDY 671
D G C ++LP P+ H QS + A KDA +A L+ +ND
Sbjct: 583 HKEPDSGSLTCVVLLPPFLPVSLRKHSSASAWQSE-KNATKDAAYQAYRALYDAELVNDN 641
Query: 672 LLP 674
L P
Sbjct: 642 LQP 644
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 217/484 (44%), Gaps = 83/484 (17%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSI+H L +++A EL + + G + + +++ +A+ E + ER+E+LGD
Sbjct: 893 LIPSIIHELGVMIMAKELANNILRKV--GIK-NMDLVRQAICARSASEPVNYERVELLGD 949
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ + + EG L+ +R ++N+ L K A L ++ +PF ++
Sbjct: 950 SILKFFTCIRVAAEYPDYPEGYLSHKRDRLISNARLHKTALEFKLPRFLNTKPFTGQKWR 1009
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAE-VRCSKGHHWLHKKTIADVVEALVG-A 1165
L Y D++ E + + + KT+AD+VEAL+G +
Sbjct: 1010 PL-------------------YLDAVLDEVRQEGLEPTSQKRKISTKTLADMVEALIGVS 1050
Query: 1166 FID---DSGFKAATAFL---KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
++D D K + FL W ++ + NI + PL +L+ LE L+
Sbjct: 1051 YVDGHLDKAVKCISLFLPETNWTSVE-----NDRRNIFDKVPADEPLPPTLE--PLEGLI 1103
Query: 1220 GHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LL++A H S+ G +RLEF+GDAVLD +I + L++V P+L ++
Sbjct: 1104 GYSFQKKALLIEALTHASYAAETGKRSLERLEFIGDAVLDNIIVTKLFNVKPELPHFRMH 1163
Query: 1278 DLRSMLVNNQAFANVAVDQSFY---KFLIFDSNVLSETINNYVDYMITPSSTR------- 1327
L++ LVN A + +++ K + D + SE + +Y+ + +S
Sbjct: 1164 TLKTGLVNGDFIAFMTMERGLKLTEKIVTEDGTLKSEEMMSYLWTFMRHNSMHIGIEMKE 1223
Query: 1328 --------------EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLNTVWK 1363
E++ G P K D+ E+ LGA+ +DSG ++ K
Sbjct: 1224 TMKRHAALRGEILDEMENGTHYPWALLAALNPKKFFSDVFEAILGAVWVDSG-SMVECEK 1282
Query: 1364 I-----MLSFLDPILKFSNLQLNPIRELLELCN----SYDLDLQFPSLKKGGKFLAEAKV 1414
+ L ++D +L+ +P EL + N +Y+LD+ L +F + V
Sbjct: 1283 VATRFGFLKYMDRLLRDKVHVQHPKEELGKWANTETVTYELDMMDNELTGEKEFFCKVLV 1342
Query: 1415 TGKD 1418
++
Sbjct: 1343 GKRE 1346
>gi|425626948|gb|AFX89032.1| dicer 1 [Mayetiola destructor]
Length = 2057
Score = 170 bits (430), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 180/369 (48%), Gaps = 67/369 (18%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------EFEASQVTNICISS 1200
H + K+IAD VEAL+GA + + G + A F+ W+GI+V F + + NI S+
Sbjct: 1698 QHSIPDKSIADCVEALIGANLIEGGPRGALLFMAWLGIRVLPSKEIPFNENSLENIPGST 1757
Query: 1201 KSF---------------LPLSASLDMA-----TLEILL----------GHQFLHRGLLL 1230
K F P S L + TLE L G+ F R LL
Sbjct: 1758 KPFERDGKKYQIVYGYWASPKSPLLHFSANPYETLERFLNGYSVFEEHIGYHFNDRSYLL 1817
Query: 1231 QAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
QA H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1818 QAMTHASYSQNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTI 1877
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYVD-------------YMITPSSTREVKEGPRC 1335
FA++AV F+K+ S L++ I+ +V Y+I+ E E
Sbjct: 1878 FASLAVRHGFHKYFRHLSPSLNDVIDRFVRIQVENNHSISEEFYLISEEECDEA-EDVEV 1936
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSY 1393
PK LGD+ ES GAI LDS +L+ VWKI + + P I +FS+ + +PIRELLEL
Sbjct: 1937 PKALGDIFESVAGAIFLDSNMSLDMVWKIFSNMMKPEIDQFSDSVPKSPIRELLEL---- 1992
Query: 1394 DLDLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKA 1449
P K GK LA+ + DVF + R I A++ +LK
Sbjct: 1993 -----EPETAKFGKPEKLADGRRVRVTVDVFGKGTYRGIGRNYRIAKCTAAKCALRQLKK 2047
Query: 1450 AGYVPKTKS 1458
G + + ++
Sbjct: 2048 QGLINRKRT 2056
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ ++ V EG+L+ RS V+
Sbjct: 1513 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSRQVS 1572
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L + F+P
Sbjct: 1573 NLNLYRLGRRKMLGERMIATKFEP 1596
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP----QKSICIFLAPTV 115
R +Q+EL A+E+NII+ LG K IA+ LI E +H +R+ K I +FLA T
Sbjct: 18 RDFQVELLAAAIEQNIIICLGHNSSKEFIALKLILEKSHELRQNVNGCSKKITLFLANTT 77
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+ ++ KV +W + I Y V+++ +Y L +++
Sbjct: 78 TGSESMYNLLFHLTDLKVINIRNNVP--TKSAEWMEIICDYHVIILSASGCVYALQEKWL 135
Query: 176 KMELIALLIFDECHHAQVKSN 196
++ + L+I DECH SN
Sbjct: 136 DLKHVNLIIIDECHKIYTDSN 156
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+ +L++FR NLL+ T V EEG+++ C LV+R++LP T S++Q +GRAR ++ +
Sbjct: 477 EEVLKRFRMHSCNLLIGTSVLEEGIELPKCNLVVRWNLPTTYRSYVQCKGRARAQKAHHI 536
Query: 534 FLVDSGNQRELDLIKNFSKEEDRMNREI 561
+V + + ++D +F D N I
Sbjct: 537 IMVST--KLDIDPKSDFQSFSDDDNERI 562
Score = 48.1 bits (113), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 1024 LLKALT-TEKCQERFS--LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
LL+A+T Q R + +RLE LGDA L Y + RHL+ G LT RS VNN
Sbjct: 1816 LLQAMTHASYSQNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNN 1875
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
+ LA R+ Y R P + R RI E +I ++ L +E
Sbjct: 1876 TIFASLAVRHGFHKYFRH--LSPSLNDVIDRFV-RI-QVENNHSISEEF------YLISE 1925
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
C + K + D+ E++ GA DS
Sbjct: 1926 EECDEAEDVEVPKALGDIFESVAGAIFLDSNM 1957
Score = 48.1 bits (113), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH----IILPANAPI 636
D + C+S + L+++YC+KLP D F P + G + + LP N+P+
Sbjct: 657 DLNTPCVSLTNAILLVNKYCAKLPSDTFTKLTPIWRCIKTKRGDRTYYQYTVRLPINSPV 716
Query: 637 HQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
Q I G P S A++ A L + LH G L+D L P
Sbjct: 717 KQDIYGIPMPSRVLARRFAGLICCKVLHLSGELDDNLQP 755
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V+N
Sbjct: 1515 SIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSRQVSN 1573
>gi|348680026|gb|EGZ19842.1| hypothetical protein PHYSODRAFT_558487 [Phytophthora sojae]
Length = 2706
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 239/532 (44%), Gaps = 57/532 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+EL A+ EN IVYL TGCGKT +A+ ++ E+ HL P K + +F PT LV
Sbjct: 222 RRYQVELTLSALLENTIVYLPTGCGKTLVAIKVMEEMKHL--NPDK-LVVFFVPTGPLVS 278
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID-QYEVLVMIPQILLYCLYHRFIKME 178
QQA I F+V F G R + ++D ++ +V+ PQ L L++ +
Sbjct: 279 QQAAYIRRESNFQVAEFSGQHGRTTAATSAPIKVDGGFDAVVVTPQYFLNLLFNGRTSIT 338
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG---ASAQAN 235
+ ++FDE HHA NHPY +++K+ D+ P I +TASP G+G AS
Sbjct: 339 DYSTMVFDEAHHA--TGNHPYCELLKNLATVDLRVRPHILALTASP-FGEGVREASGPTA 395
Query: 236 LPKSINSLENLLDAKVYSVEDAED----------------------------LESFVSSP 267
L K ++ +++A + +D E ++SF +
Sbjct: 396 LRKLADAYNAVVNAPTIAADDLEASFIPKEAQWVTVQEDESERKVREGIKRYIQSFYAEI 455
Query: 268 VVRVYQYGPVINDTSSSYVTCSEQLAEIK--REQYISALSRKLHDHQSLRNTTKQLNRLH 325
+ Q P + ++ + S+ LA+++ REQ S RK + K R
Sbjct: 456 ARLLGQVMPFEANYDTNDMELSQFLAKLRLLREQAESMEIRKTNGDAETTGVEKS-KRQP 514
Query: 326 DSMKFCLENL-GVCGALHASYILLSGD--ETMRNELIEAEGNTIDDSLCRFASQASEVFA 382
++ LE+L V + + I +G E++ E E ++ +++ FA
Sbjct: 515 SDLELVLEHLRKVASSFYTLSIHGAGTVAESLHRIFGELEASS--------SNKGRRTFA 566
Query: 383 AICRRDGIASDLSCIEVLKEPF----FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTAR 438
+ R + I + F S ++ + + + IVFV R TA
Sbjct: 567 LVETRYRAIMSPALIHFPLDTFTGSDISNRVHLVADCIRKANFDHDSRAIVFVRRRKTAI 626
Query: 439 ALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGL 498
L+ +++L+ L VG N+ + L++FR G + LLVAT V EEGL
Sbjct: 627 VLAKAMESLEVLRELNPTRFVGHNSYEGMSWEEEQRPTLDRFRQGRIRLLVATNVLEEGL 686
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS-GNQRELDLIKN 549
D+ C LVI+FD V S IQSRGRAR S + + G +R L++N
Sbjct: 687 DVPECSLVIQFDGVVGVTSLIQSRGRARHRDSSFIIFCSAVGKERNQRLVEN 738
>gi|290993372|ref|XP_002679307.1| dicer helicase [Naegleria gruberi]
gi|284092923|gb|EFC46563.1| dicer helicase [Naegleria gruberi]
Length = 857
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 236/503 (46%), Gaps = 62/503 (12%)
Query: 38 VGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA 97
VG +ES V AR+YQ EL + +EN I+ TG GKT IA LLI+ +
Sbjct: 86 VGSCSESVVSNSTATSTLLSNAREYQKELVEHCKDENTIIVAPTGAGKTFIAALLIHHML 145
Query: 98 HLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYE 157
+L P K + +F+ ++LV+QQA+ + E KV F G K +K +W+ E +
Sbjct: 146 NL--NPFKKV-LFIVNQISLVEQQARALREFGIEKVGAFHGEKKSIK---NWKLETKDFT 199
Query: 158 VLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKV 214
VLV QI+L L + I + + LLIFDECHH SNHP+ +M+D+YKP + +
Sbjct: 200 VLVCTIQIILNVLQYSDI-FDDLQLLIFDECHHTH--SNHPFKVLMRDYYKPRKHAGLLI 256
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVVRVYQ 273
PRI G++A+P K A+ L I L + LD V VE+ E+L +FV
Sbjct: 257 PRILGLSATPA-AKNTIAETLL--KILQLGHDLDCTVRQVENNEEELGTFV--------- 304
Query: 274 YGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE 333
+ P + S S +L + I + KL L N + + D KF +
Sbjct: 305 FTPSMKSISVDMDPFSLRLRDFIFNA-IRGVKIKL-----LENFSSDADVDMDDSKFGTD 358
Query: 334 NLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASD 393
L +++ + D+ E + +DD R++ + I
Sbjct: 359 EADEWLDLKMNHVTGTYDK-------EDDNRNLDD-FIRYSKSNKQNSNLI--------- 401
Query: 394 LSCIEVLKEPFFSKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
L+C P K L +L ++ + ++ ++FV + + + L+FL S
Sbjct: 402 LTC----SLPIHCAKRFALAKLLKQYKETGKELRALIFVKTRIGCK------ETLEFLQS 451
Query: 453 ---WRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
+ + V + G M+ N +IL+ FR G +N L++T V EEGLD+ C LVIR
Sbjct: 452 EPDLKDYLKVDILLGKSGMTSNQQNTILDNFRQGIVNTLISTSVAEEGLDVPACSLVIRL 511
Query: 510 DLPETVASFIQSRGRARMPQSEY 532
D ET + IQSRGRAR SE+
Sbjct: 512 DGIETTKTMIQSRGRARSANSEF 534
>gi|46117132|ref|XP_384584.1| hypothetical protein FG04408.1 [Gibberella zeae PH-1]
Length = 1451
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 196/712 (27%), Positives = 322/712 (45%), Gaps = 86/712 (12%)
Query: 18 TKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQI-ARKYQLELCKKAMEENII 76
T +C+ A V+E + V QK +P+ + R YQ E+ +++++ N+I
Sbjct: 47 TPMCSDDQANVQE-----------QDEEVKPQKVTPNPEVVNPRGYQREMLEQSIKRNVI 95
Query: 77 VYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRT 135
V + TG GKT +AV+ I +EL P K I FL TV+L +QQ V++ +
Sbjct: 96 VAMDTGSGKTQVAVMRIQHELDTC--APDK-IIWFLGKTVSLCEQQYSVVQRQMPSVSMK 152
Query: 136 FCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQV 193
G + + + W + ++ ++V IL L H F+KM +++L++FDE H+ V
Sbjct: 153 LLTGQLNIDAWSEDVWPRILNGTRIIVSTFDILRDALDHAFVKMNMLSLIVFDEVHNC-V 211
Query: 194 KSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAK 250
K N K+M +FY K M VP I G+TASP+ K ++ I LE +DA
Sbjct: 212 K-NSSGRKVMVNFYHEHKNAGMPVPAILGLTASPIQSK------SIHDEILELEVTMDAV 264
Query: 251 -VYSVEDAEDLESFVSSPVVRVYQYG--------PVINDTSSSY--VTCSEQLAEIKREQ 299
+ + ++L V+ P + Y P++ S Y + ++ + IK +Q
Sbjct: 265 CITPTINRKELLQHVNKPNLSRVLYDVEEHPTRTPLMQTLQSEYSAMDITQDPSIIKAKQ 324
Query: 300 YISALSRK-------LHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
I+ + L H++ + KQL L + K L+ LG A YI
Sbjct: 325 LIAKGEKTGPEILSMLMKHRTF--SQKQLKSLWNKSKDILDELGPWAA--DKYI------ 374
Query: 353 TMRNELIEAEGNTIDDSLCRFASQASE---VFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
+EL+ ID + S ++E A R+ IA+ ++ + K
Sbjct: 375 ---SELVSLFLKRIDSPMTFNESWSNEDRTYLAGHLRQ--IAASPHQPKLPDRHNLADKT 429
Query: 410 LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVGVNAGLKSM 468
+LI L + + I+FV A L +L ++ + +R +VG +A K
Sbjct: 430 NKLIQEL--LAADEDVVGIIFVRSRAAANVLCALLREHPEIRQRYRVGSVVG-SAATKIR 486
Query: 469 SRN-------AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
+N A L F++G +NLLV+T V EEG+D+ C LVI FD T+ S IQ
Sbjct: 487 KQNIYEYLPGATADTLRDFKTGAINLLVSTSVLEEGIDVAVCNLVICFDETTTLKSHIQR 546
Query: 522 RGRARMPQSEYAFLV-DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-YK 579
RGRAR +S+ L S + RE D ++ K R +D +A T + Y
Sbjct: 547 RGRARKQKSKMIVLARSSSDAREWDSLERDMKSRYEQERGELDALEIEARTEATSSFSYT 606
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF-YYFDDLGGT----ICHIILPANA 634
V +SGA + L +C+K+ ++ +P+P + ++ +LG + LP+
Sbjct: 607 VKNSGARLDLENSRQHLEHFCNKVFQRDYVDPRPVYIFHKTELGSAPPTFSATVTLPSGL 666
Query: 635 PIHQIV---GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
P H G S + A K+A +A LH+ G ++D+LLP ++ E E
Sbjct: 667 PKHLRRCQGGGGWRSEKNAMKEAAFRAFVMLHQEGLVSDHLLPLNADSKEAE 718
Score = 120 bits (301), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 142/561 (25%), Positives = 241/561 (42%), Gaps = 84/561 (14%)
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSL 988
P++ L R +LLH K +S + Y LP + + + + L
Sbjct: 898 PEEQYLVVDQWTRRSDLLHEIKPGQGKSSCTKPYRWVLP--ISRATVDEVPRRAAKCGML 955
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDA 1048
+PSI+H LE L+A EL L A P G +++++A+++ E ER+E LGD+
Sbjct: 956 IPSIIHELEVQLIANELSSTLLA--PVGI-TDLQLVIEAISSRSAAEPVDYERIEFLGDS 1012
Query: 1049 FLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFA 1108
LKY + H EG L + V+N+ L ++ L +I + F ++
Sbjct: 1013 VLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKWRP 1072
Query: 1109 LGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID 1168
L R ++ + P D + ++ KT+ADVVEALVGA
Sbjct: 1073 LYR---------------DEFLDKKPVDGVS--------RFVGPKTLADVVEALVGASYQ 1109
Query: 1169 DSGFKAATAFLK-WIGIQVEFEASQVTNICI--SSKSFLPLSASLDMATLEILLGHQFLH 1225
D G A +K ++G + + +V + ++ S +PL + M LE L+G+ F
Sbjct: 1110 DGGISKALECIKVFLGTKCNWHDDKVARDILFRAAISDVPLPPT--MEPLEELIGYTFQK 1167
Query: 1226 RGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
+ LL++A H S+ G Y++LEFLGDAVLDY++ + ++ P + G+L +++ +
Sbjct: 1168 KSLLIEAMTHGSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAM 1227
Query: 1284 VNNQ--AFANVA--------------------VDQSFYKFLIFDSNVLSETINNYVDYMI 1321
N AF N+ V +KF+ S + +N
Sbjct: 1228 ANADFLAFTNMQHGLRRPEVEINENGEPVPTEVSLPIWKFMRHSSPEMGRIMNETQARF- 1286
Query: 1322 TPSSTREVKE----GPRCP----------KVLGDLVESSLGAILLDSGFNLNTVWKIM-- 1365
S E+ E G P K D+ E++LGAI +DSG ++ +
Sbjct: 1287 -ESLQEEINEARTNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSG-DIEVCTAFLHK 1344
Query: 1366 ---LSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK-FLAEAKVTGKDKDV 1421
L +LD IL + +P EL +L + + ++ K +L AKV D
Sbjct: 1345 FGVLPYLDRILSDNIHVQHPKEELAKLAIDQKMTYDYTAVDGPIKEYLCTAKVG----DR 1400
Query: 1422 FISACATNLSRKEAIRIASQQ 1442
+ + L++ EA+ A+++
Sbjct: 1401 VVGVVSGALNKAEAMTKAAEE 1421
>gi|325091272|gb|EGC44582.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H88]
Length = 1432
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 172/651 (26%), Positives = 269/651 (41%), Gaps = 134/651 (20%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL +KA NII L T + P + I FL +V LV
Sbjct: 94 REYQLELFEKAKAANIIAVLDTADRASG--------------NPPR-ISFFLVDSVTLVY 138
Query: 120 QQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQA V++ +I + F G + L S WEK + ++V ++L CL FI+ME
Sbjct: 139 QQAAVLKANIDQNIDKFSGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRSFIRME 198
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASAQANL 236
I LLIFDE HHA K HPYA+I+KDFY +P+ K P+IFGMTASPV A+ ++
Sbjct: 199 HINLLIFDEAHHA--KKEHPYARIVKDFYLRRPETQKRPKIFGMTASPV-----DAKVDV 251
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
K+ +LE LLD+++ + + + L ++ P +++ Y + + C
Sbjct: 252 AKAAKNLETLLDSQIATASNLDALRQAIARPTEQIWVYDKLDATFETDLYKCM------- 304
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRN 356
QS ++L R+ + LE + G + ++ E
Sbjct: 305 ---------------QSRFGKIRELERI---FFYALEASSMLGRWCSDWLWTFALEAA-- 344
Query: 357 ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE-------------- 402
EL + EG + S+ + RD I++L+E
Sbjct: 345 ELPKLEG------------RVSKSYMQSSSRDHSKGLDEAIKLLREAGQLIRNHTFDTPV 392
Query: 403 --PFFSKKLLRLIGILSTFRLQQH--MKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
P +RL+ + ++H KCIVFV + TAR L+ + + + L
Sbjct: 393 DCPAHLSSKVRLLRHELSLYFERHTDTKCIVFVQQRHTARLLAELFSRIG-TRHMQTGIL 451
Query: 459 VGVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
+GV G R ++L KFR GELN CLV
Sbjct: 452 IGVQHDGIGGANFSFRQQFLTLL-KFRKGELN-----------------CLV-------- 485
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR-------EIMDRTSS 567
R + YA +V+ N I+ + E M R + + R SS
Sbjct: 486 ---------RPELDHDSYAHMVERDNLIHASCIQEAQRAEHIMRRFCESLPEDRIIRGSS 536
Query: 568 D--AFTCSEERIYK---VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D +ER YK V S+GA ++ + +L Y S L +++ +P+ ++ G
Sbjct: 537 DDLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKETSPQVNYFIERIDG 596
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
+C ILP +P + G P + A++ A + L K G L+D+ +
Sbjct: 597 AFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILDDHFV 647
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 210/475 (44%), Gaps = 71/475 (14%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
KQP++RA+ L RLR L +R E E Y + PE L+I + +
Sbjct: 896 KQPVVRAE-LVRLRRNLLDRATEQERGEETAYY---ICPE--PLRISALPPPVAAFAFAF 949
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE--------KCQERF---- 1037
P+I+ R+E+ L+++E L S + + L+ALT + K Q F
Sbjct: 950 PAIISRIESYLISLEACDKLQLS------IETHLALEALTKDSDNTEEHRKEQIHFQRGM 1003
Query: 1038 --SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
+ ERLE LGD FLK A LF ++ DE + +R + N NL A R L +
Sbjct: 1004 GKNYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEF 1063
Query: 1096 IRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
+R Q F ++ G + G+A + ++ L KTI
Sbjct: 1064 VRTQGFSRRNWYPEGIKL---------------LQGKAKSE------SAQNKQALGDKTI 1102
Query: 1156 ADVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
AD+ EAL+GA + D+ KA T F+ +V S + + S +
Sbjct: 1103 ADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLPSYQIVQAD 1162
Query: 1208 A-SLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITS 1262
A LD+A + LG+ F + LL AF H S+ CYQRLEFLGD++LD +
Sbjct: 1163 AGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQRLEFLGDSLLDMVCVE 1222
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-- 1320
YLY YP P LT+ + +V+N+ V V +K L++ SN L I Y + +
Sbjct: 1223 YLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISNALFGQITRYAEEIEV 1282
Query: 1321 ------ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
+P + + P+C L D++E+ +GAI +DS F+ V +L
Sbjct: 1283 AVAESADSPDAWTTTSDPPKC---LPDMLEAYIGAIFVDSNFSFEVVEDFFQRYL 1334
>gi|195335297|ref|XP_002034311.1| GM19969 [Drosophila sechellia]
gi|194126281|gb|EDW48324.1| GM19969 [Drosophila sechellia]
Length = 1731
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 165/694 (23%), Positives = 299/694 (43%), Gaps = 98/694 (14%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICI 109
KD + R YQL L + N IVYL TG GKT +A+L++ + + KP +
Sbjct: 12 KDVEIQPRSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIAKGGKRAL 71
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLY 168
F+ TV L +QQA + + FKV + G + + W +EI+ +VLV Q+ L
Sbjct: 72 FMCNTVELARQQAVSVRRNTNFKVGFYVGEQGVDEWTRGKWSEEIENNQVLVGTAQVFLD 131
Query: 169 CLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGK 228
+ + + + I+++I DECHH +HP+ + M+ F D +PR+ G+T + G
Sbjct: 132 MVTQKNMALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGN 189
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLES---FVSSPVVRVYQY-----GPVIND 280
+ A + LE + +V ++++E+ + + P + + GP
Sbjct: 190 EITKVAT---KLKELEITYRGNIITVSGSKEIENVMLYATKPTEVMVSFPHQEQGP---- 242
Query: 281 TSSSYVTCSEQLAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMK 329
T + ++ +A+IK Q+ +L R+ S R+++K+ + +L +
Sbjct: 243 TVARFI-----IAQIK--QFFVSLELMNIGVQPVRRSKSLHSPRDSSKKGFVKQLFNDFV 295
Query: 330 FCLENLGVCGALHASYILL-------SGDETMRNELIEAEGNTIDDSL-------CRFAS 375
+ LE G+ A A L+ ET+ +L+ T+ + + R +
Sbjct: 296 YQLEEYGIYAASIAIISLIVEFDLKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMT 355
Query: 376 QASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIV 435
+ + I + S ++ ++ L + + ++ + + C+VFV R
Sbjct: 356 DDDDGPDDDVNTENIIMNFSTPKI-------QRFLMSLKVSFAYKDPKDICCLVFVERRY 408
Query: 436 TARA-----LSYILQNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELN 486
T + L+YI + F+VG N+ + R KS ++KFR G N
Sbjct: 409 TCKCIYGLLLNYINSTPELRNVLTPQFMVGRNSISPDFGNVLERKHQKSAIQKFREGNAN 468
Query: 487 LLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELD 545
L++ + V EEG+D+Q C VI D +T ++Q++GRAR P++++ F + ++
Sbjct: 469 LMICSSVLEEGIDVQACNHVIILDHLKTFNMYVQTKGRARSPEAKFVVFTTERDREKTCQ 528
Query: 546 LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSS------------GACISAGYGV 593
I + D + + +R A +Y+++ GA + +
Sbjct: 529 QICQYRNAHDEIAEYLKERVLEQAMP----ELYEIEKHFQDVIKPYTNEYGAVLLPSNAL 584
Query: 594 SLLHRYCSKLPHDEFFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVG 641
+LLHRYC K+P D F P K + + + I +P N + I
Sbjct: 585 TLLHRYCQKIPTDAFGFVIPWINLLEEGERNKLFGVNAKDKHVVSINMPLNCILRDTIYS 644
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
P + AK A KA L+ LG L++ LP+
Sbjct: 645 DPMDNARIAKISAAFKACLALYSLGELSEKFLPK 678
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 248/543 (45%), Gaps = 112/543 (20%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + A++ +L +
Sbjct: 1134 DNKDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGAVKPLLILQKT 1192
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1193 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1252
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---- 1114
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1253 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFAN 1312
Query: 1115 -------RICSKETERTI---------------------HSQYDGRAPDDLNAEVRCSKG 1146
R + + E ++ S YDG D ++EV G
Sbjct: 1313 MIGPHNLRDLALDDEESLVKGNCSDIKYNCFVAGCRANAGSFYDG---SDFSSEVNYCVG 1369
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSF 1203
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1370 QVTIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNI 1429
Query: 1204 LPLSAS-------LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDA 1254
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA
Sbjct: 1430 RANVNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDA 1489
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
+LD+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+
Sbjct: 1490 ILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETIS 1549
Query: 1315 NYVDYM-------------------ITPSS----------------TREVKEG--PR--- 1334
+V++ + P+ ++E ++G P+
Sbjct: 1550 KFVNFQESQGHRVTNYVHILLEEADVLPTPLDLDDELELPHANECISQEAEQGVPPKGEF 1609
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRE 1385
PK LGD++E+ + AI LD +L W ++ +P L+ F+ N+ +NPIR+
Sbjct: 1610 NMSTNVDVPKTLGDVLEALIAAIYLDCR-DLRRTWDVIFRLFEPELQEFTRNVPINPIRQ 1668
Query: 1386 LLE 1388
L+E
Sbjct: 1669 LIE 1671
>gi|222625280|gb|EEE59412.1| hypothetical protein OsJ_11562 [Oryza sativa Japonica Group]
Length = 422
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 176/338 (52%), Gaps = 24/338 (7%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-KSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+ Q N K I+ +ENL+++K + + L + + V+ ++G V T++
Sbjct: 209 DLN-QHNYSKQISEIENLMNSKCFLLFSYMLLADKLLT-VLHEVEWGDVEAHTNAKKFLA 266
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNT--TKQLNRLHDSMKFCLENLGVCGALHASYI 346
S Q I RE+ + S Q L NT R+ + F ++ LH
Sbjct: 267 SGQ---IMREESLRLGSISC---QPLENTLCEDTYYRVESTPAFDIDKASGTCTLH---- 316
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
L ++ +E EG+ + +++C A Q A+
Sbjct: 317 -LPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGAL 353
Score = 47.8 bits (112), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 616 YYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
+ D GT C + LP ++P+ + + S+ K+ CLKA ++LH +GAL D LLP+
Sbjct: 304 FDIDKASGT-CTLHLPKSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPE 360
Query: 676 EDNATEDEPMLFSSDSDS 693
D ++EP + D+ S
Sbjct: 361 LDVPCDEEPDIGGQDNAS 378
>gi|384500232|gb|EIE90723.1| hypothetical protein RO3G_15434 [Rhizopus delemar RA 99-880]
Length = 1239
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 267/590 (45%), Gaps = 71/590 (12%)
Query: 891 YLVTNIVFEKNGYSPY------KDSDSSSHVDH---LISSYGIHLKHPKQPLLRAKPLFR 941
YL+T++ ++ N S +++ + +D+ L + IH +QP++ + L R
Sbjct: 650 YLITDVRYDMNPQSAVPSGFDIREAGYPTFIDYYRDLGDKFVIH--DYEQPMIEVERLKR 707
Query: 942 LRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
+ LH + S + + P+ C + S I ++ ++PSIM R+++LL+
Sbjct: 708 GMDFLHPGGNMPARSKGPARTW--VVPQFCTQYFVNASVYI--AMLMIPSIMTRIDSLLL 763
Query: 1002 AIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLL 1061
+ + P ++ E +L+A T ERLE LGD+ LK+ L++
Sbjct: 764 CYDSR--ARYDLP----ITDEYMLEAYTMPSASMEMDYERLETLGDSLLKFIATIRLYIN 817
Query: 1062 HDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKET 1121
+EGEL R V N L + A R Y+ Q F+ + R P S
Sbjct: 818 FPFSNEGELHHLRIRVVCNRALYRAAKRLKFYRYVTSQAFNRRHW-----RPPHFTSTAD 872
Query: 1122 ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA--TAFL 1179
NA+ S H L KT+AD+VEA +GA SG + TA
Sbjct: 873 ----------------NADTMESLKKHKLSDKTLADIVEASLGAAYLSSGLEGCLHTAIQ 916
Query: 1180 ---------KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLL 1230
KW V FE S+ + ++ + LD+ +++L+ +F L++
Sbjct: 917 MQIPFDQIEKWSDFNVAFEESRKA---VPPRAEVKALRMLDLPKIQVLVDREFNKPLLVV 973
Query: 1231 QAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
+A H S N CYQRLEFLGDA+LD+L+ YLY+ YP +PGQ+T L+ VNN
Sbjct: 974 EALTHASLPNSTSPCYQRLEFLGDAILDFLVIRYLYTKYPDAEPGQITTLKDSCVNNHVL 1033
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVDYMI----TPSSTREVKEGPRCPKVLGDLVES 1345
+ ++ +K +I S L IN + + T + E PKVL D+VES
Sbjct: 1034 GIICLNNGLHKHIIHYSGKLVRAINTLEEEVQELKDTGKAVGEYWADMNIPKVLSDVVES 1093
Query: 1346 SLGAILLDSGFNLNTVWKIMLSFLDPILKFSN----LQLNPIRELLELCNSYDLD---LQ 1398
LGA+ +D+ F+L+ + + PI + ++++P+R+LL ++ + L+
Sbjct: 1094 MLGAVFVDAKFDLSPCAALFDKWFVPIFDANVTPELVRIHPMRKLLTDLQAFGCEGFMLR 1153
Query: 1399 FPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
S + G + + DK + AC + + K A R A+++ +L+
Sbjct: 1154 NHSTGESGPTSQKCVIFLHDKSL---ACGADWNIKVARRRAAEKASQRLE 1200
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 148/295 (50%), Gaps = 24/295 (8%)
Query: 405 FSKKLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNLKFLASWRCHFLVG--- 460
FS K+ +LI +L C I+FV R TA AL ++++L L +C L+G
Sbjct: 52 FSPKIAKLIQLLGFIVNNMGQFCGIIFVERRHTAIALQKLIESLDTLDKIKCGILIGHGT 111
Query: 461 VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ G M+ +++KFRSGELN L+AT V EEGLDIQ C VIRFD T+ ++IQ
Sbjct: 112 ADEGDVQMTFKEQNKVIQKFRSGELNFLIATNVAEEGLDIQPCNFVIRFDFFHTLIAYIQ 171
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN---------REIMDRTSSDAFT 571
SRGRAR S+Y +++ N ++ + F E+ M R + +R S
Sbjct: 172 SRGRARCIDSKYVIMIEDNNLNQIGTLDEFRMLEEAMKSFCQALPAERNVANRFSLSMEG 231
Query: 572 CSEERIYKVD-----------SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
+ Y D +GA I+ V L+HRYCS LP D F KP F +
Sbjct: 232 YESDNEYDSDEDYLESAIIDMDTGATITKQNAVPLIHRYCSSLPSDSFCVLKPIFEHIAA 291
Query: 621 LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
G C + LP+NA I ++ S + AK L+A +L +L AL+ +LLP+
Sbjct: 292 GEGYKCILTLPSNAAIQKVESPFVRSKDLAKALVALQACSELKRLDALDRHLLPR 346
>gi|241061228|ref|XP_002408100.1| dicer-1, putative [Ixodes scapularis]
gi|215492369|gb|EEC02010.1| dicer-1, putative [Ixodes scapularis]
Length = 2050
Score = 167 bits (423), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 161/308 (52%), Gaps = 32/308 (10%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSF 1203
H + K+IAD VEAL+GA++ G +A F+ W+G++V + A + ++
Sbjct: 1714 QHSIPDKSIADCVEALIGAYLVSCGPRATLLFMSWLGLEVLPRDRTAEALRDVSAPLYRT 1773
Query: 1204 L--PLSASLDMATLEILL----------GHQFLHRGLLLQAFVHPSF--NRLGGCYQRLE 1249
L PL + D + L LL G++F R LLQAF H S+ NRL CYQRLE
Sbjct: 1774 LESPLVSPDDGSALAQLLSGYDAFEARIGYRFRDRAYLLQAFTHASYHYNRLTDCYQRLE 1833
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV F+++ S L
Sbjct: 1834 FLGDAVLDYLITRHLYDDPQRHSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKNVSPGL 1893
Query: 1310 SETINNYVDYMITPSSTR------------EVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
I +V+ R E E PK LGD+ ES GAI LDS +
Sbjct: 1894 FAVIQRFVETKCHSDGFRYHEKYYLEEEECEEAEEVEVPKALGDIFESVAGAIFLDSNMS 1953
Query: 1358 LNTVWKIMLSFLDPILKF--SNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVT 1415
L+TVW++ + + P +++ +++ +PIRELLEL + + GK +V
Sbjct: 1954 LDTVWRVYYAMMKPEIEYFSTHVPKSPIRELLEL-EPQTAKFERAEMTLNGKVRIRVEVF 2012
Query: 1416 GKDKDVFI 1423
GK + V +
Sbjct: 2013 GKGRFVGV 2020
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 166/359 (46%), Gaps = 46/359 (12%)
Query: 363 GNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQ 422
GNT D + A A E+ G A D++ V + + + R +
Sbjct: 480 GNTKDVTSSSVAGSAGELPGVTA---GDAKDVAAASVAGDSTVATQP-RPVARPDIVDDP 535
Query: 423 QHMKCIVFVNRIVTARALSYILQNL--KFLASW---RCHFLVGVNA-------------- 463
+ IVFV + +TA LS L + +F + +FLVG +
Sbjct: 536 NALCGIVFVRQRITAYILSLWLSEVAARFPEEYGFITPNFLVGRSTPPPVAPGGRGRAGG 595
Query: 464 ------GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
L + + +L+KFR+ E NLLVAT V EEG+++ C LV+RFD PE + +
Sbjct: 596 DVVAALALTPLGLQRQEEVLQKFRARECNLLVATSVVEEGIEVPRCNLVVRFDPPENLRA 655
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQREL--DLIKNFSKEEDRMNREIMDRTSSD-----AF 570
++ S+G+A+ S Y LV DL + + E+ + R ++ T+ D AF
Sbjct: 656 YMLSKGKAKAAHSRYFVLVPREESARFLEDLHDHRTTEQILLERSHVEDTTLDEEVDPAF 715
Query: 571 TCSEERIYK-VDSSGAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-----DLGG 623
S + YK +++ A +S ++L++RYC+KLP D F P + D
Sbjct: 716 ADSLKPPYKPLEAEDAPKVSMSTAIALVNRYCAKLPSDTFTRLTPTSSMTEVNVEGDRDT 775
Query: 624 TI--CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA 679
T+ C + LP N+P+ + IVG P AK+ LK E+LHK+G L+D L+PQ A
Sbjct: 776 TLYRCSLHLPINSPLKRCIVGDPMPGKLLAKQAVALKTCEELHKMGELDDNLVPQGKEA 834
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYAV HL+ H +V EG+L+ RS ++
Sbjct: 1549 SPSILLQALTMSNANDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLSHLRSRQIS 1608
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L L + F+P
Sbjct: 1609 NLNLYRLGRARRLGGLMVATKFEP 1632
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 63 QLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQ 119
++EL A +N IV+L +G KT + V+L+ ELA+ +R+ +S + L P+
Sbjct: 35 EVELLDTAKGQNSIVFLSSG--KTFMVVMLVKELAYQVRRDVESGGKRVLVLVPSAESGT 92
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK--- 176
+ K++E+ K F R D+ K+ ++ VLV+ P+ H F++
Sbjct: 93 RHQKMMEDYTDLKSAFFSAPDNR----TDFPKQFAEHHVLVLTPE----AFAHHFVEADA 144
Query: 177 ------MELIALLIFDECHHAQVKSNH-PYAKIMKDFYKPDIMKV 214
++ + L++FD+CH A ++ + P + DF M+V
Sbjct: 145 DIAETLIDAVNLVVFDDCHVALREAAYGPVLAFLLDFVAEGRMRV 189
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA + + Y ++
Sbjct: 1830 QRLEFLGDAVLDYLITRHLYDDPQRHSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKN- 1888
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
P F + R C + R H +Y E C + K + D+
Sbjct: 1889 -VSPGLFAVIQRFVETKCHSDGFR-YHEKY-------YLEEEECEEAEEVEVPKALGDIF 1939
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQV 1193
E++ GA DS T + + + ++E+ ++ V
Sbjct: 1940 ESVAGAIFLDSNMSLDTVWRVYYAMMKPEIEYFSTHV 1976
Score = 44.7 bits (104), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L H +LLQA + N G +RLE +GD+ L Y +T++LY +P + G+L+
Sbjct: 1542 LSSHSGPSPSILLQALTMSNAND-GINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLS 1600
Query: 1278 DLRSMLVNN 1286
LRS ++N
Sbjct: 1601 HLRSRQISN 1609
>gi|171689324|ref|XP_001909602.1| hypothetical protein [Podospora anserina S mat+]
gi|170944624|emb|CAP70735.1| unnamed protein product [Podospora anserina S mat+]
Length = 1406
Score = 167 bits (423), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 189/670 (28%), Positives = 302/670 (45%), Gaps = 98/670 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHI-AVLLIYELAHLIRKPQKSICIFLAPTVAL 117
AR YQ+E+ +++++ NIIV + TG GKT + A+L I E L R P+ + FLAPTV L
Sbjct: 6 ARAYQVEMFQESLQRNIIVAMDTGSGKTQVRAILRIQE--ELGRSPK--LIWFLAPTVQL 61
Query: 118 VQQQAKVIEESI-GFKVRTFCGGSK----RLKSHCDWEKEIDQYEVLVMIPQILL-YCLY 171
QQ +VIE+ I G + R CG + K+ W+ + ++V QIL +
Sbjct: 62 AAQQFEVIEKQIPGVQSRFICGADNVQAWKYKTGV-WQAVLTNVRIVVSTYQILFDAAVA 120
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
H F+ +E I+LL+ DE + S K VP I G+TASP++
Sbjct: 121 HAFVPLESISLLVIDEGEFSLSISLTMEGK-----------PVPHILGLTASPLM----- 164
Query: 232 AQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYG----PVINDTSSSYV 286
++NL I +LE LDA + ++L + V+ P ++ + YG P SSS +
Sbjct: 165 -RSNL-AGIETLEQTLDAICRTPCRHRDELMAQVNRPEMKAFIYGDLPEPQNATPSSSNM 222
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
T +L + R+ I+A D +R + R +++K + + +
Sbjct: 223 T---RLIDTLRQMDITA------DPHIIRLREENTERSREALKSAIMSRNTQSQKQMKAL 273
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC-----RRDGIASDLSCIEVLK 401
E M N A I+ + F S ++ + +++ L I+
Sbjct: 274 FARAREMMMNLGPWAAEYYINRVVTEFLKVGSPPAPSVHNLWDEEKAYLSATLQGIKPEA 333
Query: 402 EPF----FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCH 456
P S+K+ L+ IL++ + + IVFV T LS++L L S +
Sbjct: 334 PPSVPDNLSRKVQALLQILASHK--GNPVGIVFVTERATTSVLSHVLSVHPVLESRYSVE 391
Query: 457 FLVGV-------NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
+VG ++ L ++ ++S L +FR G++NLLVAT V EEG+D+ C LVI F
Sbjct: 392 SMVGTSKLPGGKHSFLDLTTKEDIES-LHRFRKGKVNLLVATSVLEEGIDVPVCNLVICF 450
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE-----EDRMNREI--- 561
D P + SFIQ RGRARM +SE L + L+ K +E ED + REI
Sbjct: 451 DKPSNLKSFIQRRGRARMNESELWVLFKDDQDQSLEEWKELEQEMKRKYEDEL-REIAGL 509
Query: 562 --MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
M+++ +D + + ++GA ++ L +CS L +F N P FY
Sbjct: 510 EQMEQSEADDYPKMTD-----PTTGAQMTIHDAKQHLDHFCSTLSTRKFVNWAP-FYIIH 563
Query: 620 DLGGTICHIILPA------NAPI---------HQIVGTPQSSMEAAKKDACLKAIEDLHK 664
DL G P N P+ + P + A KDA +A + L++
Sbjct: 564 DLEGNPIDARKPGLRAATVNLPVSLSPSLRRAESLRAWPSEAF--ACKDAAFQAYKKLYE 621
Query: 665 LGALNDYLLP 674
G ++ +LP
Sbjct: 622 AGLIDKNMLP 631
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 152/357 (42%), Gaps = 60/357 (16%)
Query: 949 RKLEDSESHEL---EEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
RKL D+ H+L + Y +P Q+K+ +LP++ + + LVA
Sbjct: 841 RKLPDAFIHQLPSGKPYPRVIP--ASQVKVDKIPTVFAHVGLMLPALTAAVGDYLVA--- 895
Query: 1006 KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTV 1065
+ LL S ++++ A+T + ER+E LGD+ LK+ T+
Sbjct: 896 RDLLDGSLQTTGITGLDLVVTAITASGARRSIDYERIEFLGDSILKFCT---------TI 946
Query: 1066 D---EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
+ + L+ + V+N L K A L YI + + ++ P E
Sbjct: 947 NCSAQCFLSASKDKIVSNYRLCKAAIDFGLARYIINTAYTTDKWR------PVFVEDYLE 1000
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA----F 1178
RT + DG +++ KT+ADVVEAL+GA G A A F
Sbjct: 1001 RTDNPSSDGPKTREMST-------------KTLADVVEALIGASHISGGINKALACISLF 1047
Query: 1179 L---KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVH 1235
L KW I QV LP +M LE L+G+ F + LL++A H
Sbjct: 1048 LPEAKWQSID---HGRQVLYDEAPDDEPLPP----NMHLLEKLIGYTFKKKSLLIEAMTH 1100
Query: 1236 PSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYP-----KLKPGQLTDLRSMLVN 1285
PSFN RLEFLGDA+LDYL+ L+S+ L+ +L LR+ LVN
Sbjct: 1101 PSFNVQDTRASLDRLEFLGDAILDYLVVESLFSLREPLTGLPLENSKLHLLRTALVN 1157
>gi|392593064|gb|EIW82390.1| ribonuclease III [Coniophora puteana RWD-64-598 SS2]
Length = 1217
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 154/540 (28%), Positives = 239/540 (44%), Gaps = 68/540 (12%)
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSS 985
LK+ +QPL++ + L NLL+ K Y L PEL I ++
Sbjct: 635 LKNYEQPLIQVSKVPNLSNLLNPLKTAAEVGKPTARY---LIPELTAKYTI--PANVYRM 689
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
LLPS+ R++N+L+A EL +L +++ +LL AL+ F ERLE+L
Sbjct: 690 ALLLPSVTQRIDNILIAKELNAMLFEH-----QITEGLLLSALSAPSALYAFDYERLELL 744
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFD--- 1102
GDAFLKY ++F+++ EG L R +N LL+ A L YI+ +P
Sbjct: 745 GDAFLKYITSIYVFVIYPAHAEGSLHNLRQKMTSNKALLQNALAIELPPYIQGKPLSLKL 804
Query: 1103 --PCQFFALGRRCPRICSKETERTIHSQYDGRA------PDDLNAEVR-------CSKGH 1147
P + +CP I + + S D PD A + +
Sbjct: 805 WLPTNYTL--DKCPPIAHQRHDEHAASAVDTTVVDTRPHPDTTQARTKKKVRKQNQDQVT 862
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP-- 1205
WL KTIADVVEA++GA G A +K + I + Q ++ K P
Sbjct: 863 QWLGDKTIADVVEAIIGAAYLSGGCDVALRVMKALTIPLN-SVEQWSDF--GRKVLTPPP 919
Query: 1206 -LSASLDMATLEI---LLGHQFLHRGLLLQAFVHPSFNRLGGC-YQRLEFLGDAVLDYLI 1260
+SA+L +LE L+ + + LL QA H S YQRLEFLGDA+LD+++
Sbjct: 920 RVSAALPPRSLEFVEKLVRRKVKYPHLLAQALTHGSIQGYDATTYQRLEFLGDAILDFMV 979
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
++Y L PG +T L+S +V N A A + V + L+ D +SE+ Y +
Sbjct: 980 VRHIYHRDESLSPGVMTILKSAMVANSALAAICVWSGLNEHLLVDDYEVSESFKKYARDL 1039
Query: 1321 ITPSS---TREVKEGPRC---------PKVLGDLVESSLGAILLDSGFNLNTVW----KI 1364
T +++G PK L D+VES +GA+ + GF ++ ++
Sbjct: 1040 KAKEQEVRTASLRDGTPIGQFWLHITPPKALSDVVESIIGALYISDGFEPLSIEIFFDEV 1099
Query: 1365 MLSFLDPILKFSNLQLNPIRELLEL-----CNSYDLD-------LQFPSLKKGGKFLAEA 1412
++ F D + + +P + L +L C Y+LD +F + G +AEA
Sbjct: 1100 LMPFYDQYITLKTITEHPAKILFDLLQAHGCQEYELDKGKGDGQFKFCKVVVHGTLVAEA 1159
>gi|170033786|ref|XP_001844757.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
gi|167874834|gb|EDS38217.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
Length = 2270
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 153/295 (51%), Gaps = 53/295 (17%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------------------- 1186
H + K++AD VEAL+GA++ + G + A + W+GI+V
Sbjct: 1914 QHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVCEQPFDPTAPRIPGSSA 1973
Query: 1187 --EFEASQVTNI---CISSKSFLPLSASLDMATLEILL----------GHQFLHRGLLLQ 1231
E Q+ +I I +S L A +LE LL G++F R LLQ
Sbjct: 1974 PYEVNGKQIQSIYGYWIPPRSPLLTHAPNPEKSLEHLLDGYSAFEDSLGYRFQDRSYLLQ 2033
Query: 1232 AFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
A H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN F
Sbjct: 2034 AMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIF 2093
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVD-------------YMITPSSTREVKEGPRCP 1336
A++AV F+K+ S L++ I+ +V Y+I+ E E P
Sbjct: 2094 ASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHSISEEYYLISEDECDEA-EDVEVP 2152
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLEL 1389
K LGD+ ES GAI LDS +L+ VW++ + P I +FSN + +PIRELLEL
Sbjct: 2153 KALGDVFESVAGAIFLDSNMSLDAVWRVYRGMMGPEIEQFSNSVPKSPIRELLEL 2207
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+ +L++FR E NLL+ T V EEG+D+ C LVIR++ P + S++Q +GRAR P S Y
Sbjct: 546 EEVLKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARAP-SAYH 604
Query: 534 FLVDSGNQRELDLIKNFSKEE--DRMNREIMDRTS 566
L+ + +L L N ++++ ++++R++ +RTS
Sbjct: 605 ILIVTPKVDQL-LAANGARDDLSEQVHRKVCERTS 638
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ ++ V EG+L+ RS V+
Sbjct: 1730 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSKQVS 1789
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L + F+P
Sbjct: 1790 NLNLYRLGRRKVLGESMIATKFEP 1813
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 25/223 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N+I+ L K IA+ LI+EL +R + Q
Sbjct: 17 RDFQVELLASARERNLILCLAHNSNKEFIALKLIHELGFQLR--------------STAQ 62
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLK------SHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
++ + + S V + LK DWE+ + Y+V++ + L +
Sbjct: 63 RRKRTLYISNNDSVYSLMRNLTDLKVVHVDGDEPDWERIVADYQVIIANERKCLDAVVCG 122
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
+++++ + LL+ DECH ++ N A++ ++Y+ + P+I G+ A P+ G
Sbjct: 123 YLELDEVNLLVIDECH--KIYGNVEIAELFSEYYE-RCRERPKILGL-AGPLHNAGC-IP 177
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
L + LE L AK + D + + + P + Q P
Sbjct: 178 GRLSAELEQLERCLKAKAETASDIVTVLRYCTKPKELILQCAP 220
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 1024 LLKALT-TEKCQERFS--LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
LL+A+T C R + +RLE LGDA L Y + RHL+ G LT RS VNN
Sbjct: 2031 LLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNN 2090
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
+ LA R++ Y R P + R RI ++ +I +Y L +E
Sbjct: 2091 TIFASLAVRHDFHKYFRH--LSPGLNDVIDRFV-RI-QQDNGHSISEEY------YLISE 2140
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
C + K + DV E++ GA DS + + G+
Sbjct: 2141 DECDEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWRVYRGM 2184
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L H ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1723 LTNHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCTYENVHEGKLS 1781
Query: 1278 DLRSMLVNN 1286
LRS V+N
Sbjct: 1782 HLRSKQVSN 1790
>gi|367035818|ref|XP_003667191.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
gi|347014464|gb|AEO61946.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
Length = 1475
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 187/713 (26%), Positives = 315/713 (44%), Gaps = 101/713 (14%)
Query: 29 EECSVAVSGVGFGAESSVG--------AQKTDKDPKQI----ARKYQLELCKKAMEENII 76
+E S +G A + G + D++P + AR YQLE+ ++++++N+I
Sbjct: 39 DELETTPSSIGGNASHTTGLDSVHSSRSSTPDQEPPRTVTMTARAYQLEMLEESLKKNVI 98
Query: 77 VYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRT 135
V + TG GKT +A++ I A L R I FLAPTV+L +QQ + I I G + R
Sbjct: 99 VAMDTGSGKTQVAIMRIQ--AELERG--DKIAWFLAPTVSLAEQQFETIRAQIPGVQSRL 154
Query: 136 FCGGSKRLKSHCD----WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHA 191
GS +++ W+ + ++V QIL + H + + + +++ DE HH+
Sbjct: 155 IL-GSDNVEAWSSKPGVWDAVLFNTRIIVSTYQILFDAVTHALVPLASLGIIVVDEAHHS 213
Query: 192 QVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGASAQANLPKSINSLENLLD 248
K N+P A++M++ Y P+ + VP I G+TASP++ +NL + LE LD
Sbjct: 214 --KGNNPVARLMREHYVPNKARGLPVPHILGLTASPLM------TSNL-NDLEVLERTLD 264
Query: 249 AKVYS-VEDAEDLESFVSSPVVRVYQYGPV--INDTSSSYV-------TCSEQLAEIKRE 298
A + + E+L + V+ P ++ YG ++D + TC E +I+++
Sbjct: 265 AVCKTPSKHREELMAQVNHPEMKTISYGGAASLDDAAQPTPAMLRLRNTCLE--LDIRQD 322
Query: 299 QYISAL--SRKLHDHQSLRNT--TKQLNRLHDSMKFC------LENLGVCGALHASYILL 348
++ L ++L+ TK+ FC + G A + Y ++
Sbjct: 323 PFVRHLLTDNTARGRETLKKVLLTKETYSRSQMETFCRRAWEVWKTFGPWAADYYIYRVI 382
Query: 349 SGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
S + EG+++ D + ++ A + D + E S K
Sbjct: 383 SSFLRGSDNPPSQEGDSLGDQEWAYLAE------AFRKLDAQPPPETPTE------LSPK 430
Query: 409 LLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVN----- 462
+ L+ L + + + I+FV + LS+IL + K +R +VG +
Sbjct: 431 VHALLDALESH--EGNPIGIIFVKERASVAVLSHILAVHPKTSRRYRVGSMVGTSRVPGR 488
Query: 463 -AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
+ +S+ L+ FR G +NLLVAT V EEG+D+ C LVI FD + + SFIQ
Sbjct: 489 RRDILDLSQKDYLLALQAFRKGAINLLVATSVLEEGIDVPACNLVICFDKLDNLKSFIQR 548
Query: 522 RGRARMPQSEYAFLVDSGNQRELDLIKNFSKE-----EDRM--NREIMDRTSSDAFTCSE 574
RGRARM S LV+ + +N E ED M N+ + SD +
Sbjct: 549 RGRARMSASHLYLLVEDESDPSSRQWQNLEGEMKRKYEDDMRENKRLEQIEDSDDL---D 605
Query: 575 ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPA-- 632
I + +GA I+ + L +C+ L ++ + P FY DL G P
Sbjct: 606 YPILRDRETGAQITILDAKAHLEHFCATLSTRKYVDWSP-FYVVHDLEGNPVDARQPGLR 664
Query: 633 NAPIHQIVG-TPQ----------SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
A +H V P+ S A +DA +A L+++G +N +LP
Sbjct: 665 KATVHLPVSLAPELRTFESLHAWRSEAKACRDAAFQAYAKLYEVGLVNRNMLP 717
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 140/319 (43%), Gaps = 34/319 (10%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+P+I LE LVA K LL +++ A++ + ER+E LGD
Sbjct: 969 FIPAITRALEVHLVA---KDLLDTRLEPTGITDLSLVVAAISASAARGPTDYERVEFLGD 1025
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
A LK+ + + EG L+R + V+NS L A L YI + F
Sbjct: 1026 AILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLDRYIIHKTF------ 1079
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
T+H D L ++ L KT+ADVVEAL+GA
Sbjct: 1080 ----------------TMHKWRPAYVEDLLENPPSETETRR-LSTKTLADVVEALIGASY 1122
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF--LPLSASLDMATLEILLGHQFLH 1225
G A A + + E+ + + + +++ PL A+ M +LE LLG+ F
Sbjct: 1123 ISGGTPKALACMSLFLPEFEWHSIEHCREVLYNQAPDDEPLPAT--MRSLESLLGYTFTK 1180
Query: 1226 RGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLY--SVYPKLKPGQLTDLRS 1281
R LL++A HPS N + RLEFLGDA+LDY++ L+ S L+ L LR+
Sbjct: 1181 RSLLVEAMTHPSCNGPNIRASLDRLEFLGDAILDYIVVKALFDMSTPTPLENSTLHLLRT 1240
Query: 1282 MLVNNQAFANVAVDQSFYK 1300
LVN A +A++ + +
Sbjct: 1241 TLVNADILAFLALEWAITQ 1259
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+R+EFLGDA+L + + YP G L+ L+ +V+N + AVD +++I
Sbjct: 1017 YERVEFLGDAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLDRYIIH 1076
Query: 1305 DSNVLSETINNYV-DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
+ + + YV D + P S E + K L D+VE+ +GA + G
Sbjct: 1077 KTFTMHKWRPAYVEDLLENPPSETETRR--LSTKTLADVVEALIGASYISGG 1126
>gi|339239929|ref|XP_003375890.1| putative RNase3 domain protein [Trichinella spiralis]
gi|316975421|gb|EFV58865.1| putative RNase3 domain protein [Trichinella spiralis]
Length = 1903
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 199/439 (45%), Gaps = 77/439 (17%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L A+T E F+LE LEILGD+FLKY + + + + EG+L+ RS ++N NL
Sbjct: 1403 VLHAITASAVAETFNLEGLEILGDSFLKYVTTVYCYKAYSKMHEGKLSLLRSRMISNYNL 1462
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKE---------------------TE 1122
KL R N+ Y+ FDP + P C + E
Sbjct: 1463 YKLGKRKNIPQYMIAIKFDPSDTWLPPCYVPLNCEVQDTAIEEEDKLMEQRLMNDESVVE 1522
Query: 1123 RTIHSQYDGR-----------APDDLNAEVRCSK-GHHWLHKKTIADVVEALVGAFIDDS 1170
+ + + GR P+DL+ V + + K +AD VEAL+GA++
Sbjct: 1523 QQRNVETTGRQATTGSKSTKWVPEDLSQLVPFNLLAQQGISDKGVADCVEALIGAYLLFC 1582
Query: 1171 GFKAATAFLKWIGIQVEFEASQ----------------------------VTNICISSKS 1202
G + FL W+G++VE E S + N S
Sbjct: 1583 GTRRTLDFLHWLGLKVEDEVSLRGFSRCIVSPTPISFANFDLYGVTKSALINNSADSEAC 1642
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLI 1260
L ++ E ++G++F R LL+QA H ++ N + CYQRLEFLGDAVLD+LI
Sbjct: 1643 LKTLWNRFSLSQFEDIIGYRFKDRSLLVQALTHSTYFYNEVTDCYQRLEFLGDAVLDHLI 1702
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN-VAVDQSFYKFLIFDSNVLSETIN----- 1314
T +LY PG LTDLRS L + + + F K L N++ E N
Sbjct: 1703 TRHLYEDKRMHSPGMLTDLRSALYFMYLCPGLMMMIEKFVKTL----NIIKENANFDREV 1758
Query: 1315 --NYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
+ ++ + +E PK LGD+ ES GAI LDSG +L+TVW I + L
Sbjct: 1759 RVHLLNLYLLEGEEENAEEQVEVPKALGDIFESVAGAIYLDSGCSLHTVWCIYYNMLREE 1818
Query: 1373 LKFS--NLQLNPIRELLEL 1389
++ N ++PIR+LLEL
Sbjct: 1819 IEKCCLNPPISPIRDLLEL 1837
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 65/297 (21%)
Query: 427 CIVFVNRIVTARALSYILQNLKFLASW-------RCHFLVGVNAGLKSMSRNAMKS---- 475
CIVF A +L+ L+ L W + FLVG ++ S+ A+
Sbjct: 381 CIVFFKHRYIAYVYKILLKTLQNL--WPDMFGYLKVDFLVGYDSETADASKEALHERQHE 438
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L+KFR+ ELNLL+ T+V +G++++ VI +D PE++ SFI + RA P S Y L
Sbjct: 439 VLKKFRTKELNLLLTTRVLAKGIELRGANCVIHYDEPESLRSFIYVKNRANKPNSHYFIL 498
Query: 536 VDSGNQR----------ELD-LIKNFS---KEEDRMN-REIMDRT-------SSDAFTCS 573
+ ++D +I+N+S E+D + + +D T S+
Sbjct: 499 LSECTSALSASVINTFVDIDKIIRNYSLLDYEDDNLELPDDLDDTFKPYYPKKSEEVGDD 558
Query: 574 EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN----------------PKPKFYY 617
+E K+ ++ C + + +++ YC +LP D F P PK+
Sbjct: 559 DEEADKLKNNNVCATLANSIRIVNHYCQRLPCDIFSRLVADCHVEKVMSGECAPSPKYR- 617
Query: 618 FDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ LP N+P G S+ A++ L+ ++ LH+ G L D L+P
Sbjct: 618 --------ATLKLPINSP-----GPTVDSVMLARRSVALETVKLLHRRGELYDSLMP 661
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 74 NIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAPTVALVQQQAKVIEESIG 130
N+I LG+ + +++V+LI E + ++RKP + C++L ++ A I
Sbjct: 29 NLIAPLGSAVDRLYVSVMLIREFSSMLRKPCSKNRRWCVYLVDRATSIKSVADRIRIYTN 88
Query: 131 FKV-RTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDE 187
V FC K +C +++ E+ V + L FI L+IF++
Sbjct: 89 LNVGEIFCDIHLESEAKQYC--AAQMEGNEIFVTTGTHFMKLLDLSFIPRNCYCLVIFED 146
Query: 188 CHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG--KGASAQANLPKSINSLEN 245
CH A ++S HPY I+K+F + PR+ G+T S + KG Q I++++
Sbjct: 147 CHLA-IRS-HPYRNIVKEFLNIEKEYRPRLLGLTMSLINDEVKGDCLQY----GIDTMQE 200
Query: 246 LLDAKV 251
+L +KV
Sbjct: 201 VLCSKV 206
Score = 41.2 bits (95), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 891 YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRK 950
Y V N+ + + D + S + YG+ + H QPLL N L R+
Sbjct: 907 YFVLNVDEGLTPLTKFPDDEYESFKSYFWQKYGLEIYHDDQPLLNVDYTASRLNRLFPRR 966
Query: 951 LEDSESHELEEYFD---------DLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLV 1001
ES LE +D L PEL + I S L LPSI++RL +LL+
Sbjct: 967 QARRES--LEADYDTMSVVAQKQKLVPELVDIHPIPAS--TWRCLQYLPSILYRLSSLLL 1022
Query: 1002 AIELK 1006
A EL+
Sbjct: 1023 ANELR 1027
>gi|115387529|ref|XP_001211270.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195354|gb|EAU37054.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1344
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 172/641 (26%), Positives = 278/641 (43%), Gaps = 90/641 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL--AHLIRKPQKS---ICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ + LI + + I FL +
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V+ ++ V F G L + W + ++ V+V +IL CL +
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASA 232
+I M+ I LL+FDE HH K +HPYA+I++D Y + PRIFGMTASPV KG
Sbjct: 230 YITMQQINLLVFDEAHH--TKKDHPYARIIRDSYLRVPPSSRPRIFGMTASPVDTKGDVL 287
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND-TSSSYVTCSEQ 291
+A +LE LLD+K+ + L V+ P V+ Y + TS Y +
Sbjct: 288 EA-----ARNLEALLDSKIATTSKLTILRQVVNRPNEEVWIYDKLQPTFTSDLYKLMESR 342
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNR-----LHDSMKFCLENLGVCGALHASYI 346
+I + + +R H + T +R L D + +E + G ++ +
Sbjct: 343 FGDISHLEPMFRFAR----HATSELGTWCADRVWVSALADDVLPKVEG-SIGGKRQSTGL 397
Query: 347 LLSGDETMRN--------ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
+ R+ EL+E+ + +S+ ++ I + G ++ CI
Sbjct: 398 GQLPKDVHRDITRIKEASELVESHPPNDPGAPEALSSKVRVLWKEISQCFGQETNTKCIV 457
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
++ + +K L L +L+ L+ + ++ R+ I N+ F R L
Sbjct: 458 FTEKRYTAKVLFDLFTVLNVPGLRPGV--------LIGVRSSDRIGMNVTF----RQQIL 505
Query: 459 VGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF---DLPETV 515
V +FR+GE+N L AT V EEGLDI C LV+ D +
Sbjct: 506 TMV-----------------RFRTGEINCLFATAVAEEGLDIPDCNLVVSMIEKDNADHE 548
Query: 516 ASFIQSRGRARMPQSEYAFLVDS----GNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT 571
+ +Q ++ QS L + GN + D + ++RE
Sbjct: 549 SILVQVNDAEKIMQSFCQLLPEDRILHGNDDDTDAV---------LDRE----------- 588
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E Y + S+ A ++ +++L RY S L ++ + + + +C +ILP
Sbjct: 589 -EWEEPYTLPSTAARLTHHSAITVLARYASSLQYENDTSAQVTYVVLPVNDAYVCEVILP 647
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+PI G P AK+ A +A L K L++YL
Sbjct: 648 EKSPIRGATGMPAMKKSTAKRYAAFEACRLLRKHRLLDEYL 688
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 177/416 (42%), Gaps = 64/416 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L A+ L RLR L +R + E P LKI I ++ P
Sbjct: 935 QPVLHAE-LVRLRRNLLDRMTDKERKLETRSVICIEP-----LKISAIPAAIAATCLAFP 988
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFS---------- 1038
+I+ RL+ L+ +E L G E+S E L+ALT ++ E S
Sbjct: 989 AIISRLDAYLIGLEACKKL------GLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMG 1042
Query: 1039 --LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGD FLK A LF H +E + R + N NL A + L +I
Sbjct: 1043 KNYERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFI 1102
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R + F ++ G + HS+ G S+ H L +KTIA
Sbjct: 1103 RSRGFSRDTWYPEGLTL-------LQGRDHSKKIG------------SESKHALAEKTIA 1143
Query: 1157 DVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISS----KSFL 1204
DV EAL+GA + D G +A +A + AS I + S +
Sbjct: 1144 DVCEALIGAALLTPGPQHRFDMGVRAVSAV---VDSNEHNAASWRDYISLYSIPKYQEQA 1200
Query: 1205 PLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLI 1260
P + +D+ +E LG+ F + LL AF HPS+ CYQ LEFLGDA+LD +
Sbjct: 1201 PDGSEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDALLDMVC 1260
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
L+ +P P LT+ + +V+N+ +AV + L + S+ L I +Y
Sbjct: 1261 VEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHY 1316
>gi|195584278|ref|XP_002081941.1| Dcr-2 [Drosophila simulans]
gi|194193950|gb|EDX07526.1| Dcr-2 [Drosophila simulans]
Length = 1666
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 238/520 (45%), Gaps = 86/520 (16%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1089 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1147
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1148 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1207
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICS 1118
T+ +S V+N NLL A ++ + F P AL R P +
Sbjct: 1208 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFAN 1267
Query: 1119 KETERTIH--------SQYDGRAPD-DLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDD 1169
+ S G D N V G + K IAD +EAL+G + +
Sbjct: 1268 MIGPHNLRDLALDDEESLVKGNCSDIKYNRFVNFCVGLVAIANKVIADTLEALLGVIVKN 1327
Query: 1170 SGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSASLDM-------ATLEILL 1219
G + A L++ I ++ +++ N+ + SK+ + ++ + LE L
Sbjct: 1328 YGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINHSHLEHNL 1387
Query: 1220 GHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD+LI++Y++ K+ PG LT
Sbjct: 1388 GYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALT 1447
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM----------------- 1320
DLRS LVNN A + V + F++ ++ LSETI+ +V++
Sbjct: 1448 DLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNYVHILLEE 1507
Query: 1321 --ITPSS----------------TREVKEG--PR----------CPKVLGDLVESSLGAI 1350
+ P+ ++E ++G P+ PK LGD++E+ + AI
Sbjct: 1508 ADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLEALIAAI 1567
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
LD +L W+++ +P L+ N+ +NPIR+L+E
Sbjct: 1568 YLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1606
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 20 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 79
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 80 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 139
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 140 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 197
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 198 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 243
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 244 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 303
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 304 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 363
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 364 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 423
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 424 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 483
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 484 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 543
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 544 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 599
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 600 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 659
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 660 FKACLALYSLGELSEKFLPK 679
>gi|408394282|gb|EKJ73491.1| hypothetical protein FPSE_06330 [Fusarium pseudograminearum CS3096]
Length = 1451
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 193/685 (28%), Positives = 311/685 (45%), Gaps = 77/685 (11%)
Query: 46 VGAQKTDKDPKQI-ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKP 103
V QK +P+ + R YQ E+ +++++ N+IV + TG GKT +AV+ I +EL P
Sbjct: 64 VKPQKVTPNPEVVNPRGYQREMLEQSIKRNVIVAMDTGSGKTQVAVMRIQHELDTC--AP 121
Query: 104 QKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVM 161
K I FL TV+L +QQ V++ + G + + + W + ++ ++V
Sbjct: 122 DK-IVWFLGKTVSLCEQQYSVVQRQMPSVSMKLLTGQLNIDAWSEDVWPRILNGTRIIVS 180
Query: 162 IPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIF 218
IL L H F+KM +++L++FDE H+ VK N KIM +FY K M VP I
Sbjct: 181 TFDILRDALDHAFVKMNMLSLIVFDEVHNC-VK-NSSGRKIMVNFYHEHKNAGMPVPAIL 238
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAK-VYSVEDAEDLESFVSSPVVRVYQYG-- 275
G+TASP+ K + I LE +D+ + + ++L V+ P + Y
Sbjct: 239 GLTASPIQSKSNHDE------ILELEVTMDSVCITPTINRKELLQHVNKPNLSRVLYDVE 292
Query: 276 ------PVINDTSSSY--VTCSEQLAEIKREQYISALSRK-------LHDHQSLRNTTKQ 320
P++ S Y + ++ + IK +Q I+ + L H + + KQ
Sbjct: 293 EHPTRTPLMQTLQSEYSAMDITQDPSIIKTKQLIAKGEKTGPEILSLLMKHGTF--SQKQ 350
Query: 321 LNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE- 379
L L + K L+ LG A YI +EL+ D + S ++E
Sbjct: 351 LKSLWNKSKDILDELGPWAA--DKYI---------SELVSLFLKRFDSPMTFNESWSNED 399
Query: 380 --VFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTA 437
A R+ IA+ ++ + K +LI L + + I+FV A
Sbjct: 400 RTYLAGHLRQ--IAASPHQPKLPDRHNLADKTNKLIQEL--LAADEDVVGIIFVRSRAAA 455
Query: 438 RALSYIL-QNLKFLASWRCHFLVGVNAGLKSMSRN-------AMKSILEKFRSGELNLLV 489
L IL ++ + +R +VG +A K +N A L F++G +NLLV
Sbjct: 456 NVLCAILREHPEIRQRYRVGSVVG-SAANKIRKQNIYEYLPGATADTLRDFKTGAINLLV 514
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS-GNQRELDLIK 548
+T V EEG+D+ C LVI FD T+ S IQ RGRAR +S+ L S + RE D ++
Sbjct: 515 STSVLEEGIDVAVCNLVICFDETTTLKSHIQRRGRARKQKSKMIVLARSTSDAREWDSLE 574
Query: 549 NFSKEEDRMNREIMDRTSSDAFT-CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDE 607
K RE +D +A T + Y V SGA + L +C+K+ H +
Sbjct: 575 RDMKSRYEQEREELDTLEIEARTEATSHFAYTVKKSGARLDLENSRQHLEHFCNKVFHRD 634
Query: 608 FFNPKPKF-YYFDDLGGT----ICHIILPANAPIH----QIVGTPQSSMEAAKKDACLKA 658
+ + +P + ++ +LG + LP+ P H Q G +S + A K+A A
Sbjct: 635 YVDQRPVYIFHKTELGSAPPTFSATVTLPSGLPKHLRRCQGRGGWRSE-KNAMKEAAFHA 693
Query: 659 IEDLHKLGALNDYLLPQEDNATEDE 683
LH+ G ++D+LLP ++ E E
Sbjct: 694 FVILHQEGLVSDHLLPLNADSKEAE 718
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 229/509 (44%), Gaps = 82/509 (16%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PSI+H LE L+A EL L A P G +++++A+++ E ER+E LGD
Sbjct: 955 LIPSIIHELEVQLIANELSSTLLA--PVGI-TDLQLVIEAISSRSAAEPVDYERIEFLGD 1011
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LKY + H EG L + V+N+ L ++ L +I + F ++
Sbjct: 1012 SVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKWR 1071
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
L R ++ + P D + ++ KT+ADVVEALVGA
Sbjct: 1072 PLYR---------------DEFLDKKPVDGVSR--------FIGPKTLADVVEALVGASY 1108
Query: 1168 DDSGFKAATAFLK-WIGIQVEFEASQVTNICI---SSKSFLPLSASLDMATLEILLGHQF 1223
D G A +K ++G + + +V CI ++ S +PL + M LE L+G+ F
Sbjct: 1109 QDGGISKALECIKIFLGTKCNWHDDKVAR-CILFRAATSDVPLPPT--MEPLEELIGYTF 1165
Query: 1224 LHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
+ LL++A H S+ G Y++LEFLGDAVLDY++ + ++ P + G+L +++
Sbjct: 1166 EKKSLLIEAMTHGSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKT 1225
Query: 1282 MLVNNQ--AFAN---------VAVDQS-----------FYKFLIFDS----NVLSETINN 1315
+ N AF N VA++ +KF+ S +++ET
Sbjct: 1226 AMANADFLAFTNMQHGLRRPEVAINDDGEPVSTEVSLPIWKFMRHSSPEMGRIMNETQAR 1285
Query: 1316 YVDYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSG-FNLNTVWKI 1364
+ + R G P K D+ E++LGAI +DSG + T +
Sbjct: 1286 FESLQGEINEAR--TNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSGDIEVCTAFLH 1343
Query: 1365 ---MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGK-FLAEAKVTGKDKD 1420
+L +LD IL + +P EL +L + + ++ K +L AKV D
Sbjct: 1344 KFGVLPYLDRILSENIHVQHPKEELAKLAIDQKMTYDYTAVDGPIKEYLCTAKV----GD 1399
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKA 1449
+ + L++ EA+ A+++ + L A
Sbjct: 1400 RVVGVVSGALNKVEAMTKAAEEGVNLLSA 1428
>gi|80979107|gb|ABB54756.1| Dicer-2 [Drosophila simulans]
Length = 1567
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGVNAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 204/422 (48%), Gaps = 56/422 (13%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1176 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---- 1114
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFAN 1295
Query: 1115 -------RICSKETERTI---------HSQY------DGR---APDDLNAEVRCSKGHHW 1149
R + + E ++ ++++ +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLALDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SAS-------LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DY 1319
++
Sbjct: 1536 NF 1537
>gi|80979101|gb|ABB54753.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 251/540 (46%), Gaps = 106/540 (19%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK +L + +EG L
Sbjct: 1176 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLCATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---- 1114
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFAN 1295
Query: 1115 -------RICSKETERTI---------HSQY------DGR---APDDLNAEVRCSKGHHW 1149
R + + E ++ ++++ +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLALDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SASLDM-------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DYM-------------------ITPSS----------------TREVKEG--PR------ 1334
++ + P+ ++E ++G P+
Sbjct: 1536 NFQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMS 1595
Query: 1335 ----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ +P L+ F+ N+ +NPIR+L+E
Sbjct: 1596 TNVDVPKTLGDVLEALIAAIYLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1654
>gi|390332898|ref|XP_790894.2| PREDICTED: endoribonuclease Dicer-like [Strongylocentrotus
purpuratus]
Length = 1815
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 153/294 (52%), Gaps = 52/294 (17%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
H + K+IAD VEAL+G ++ GF++A + W+G+ V +N S LP
Sbjct: 1465 QHSMSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGLDVLPTIDGQSNKRNDQSSDLP- 1523
Query: 1207 SASLDMATL------------------EILLGHQ--------------FLHRGLLLQAFV 1234
+A L ++ L E +L HQ F R LLQAF
Sbjct: 1524 AADLPVSCLYGYLKQPESPLLRSVPNAEDVLQHQLVGYDGFEKTINYRFRDRAYLLQAFT 1583
Query: 1235 HPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANV 1292
H S++R + CYQRLEFLGDA+LDYLIT +LY + L PG LTDLRS LVNN FA++
Sbjct: 1584 HSSYHRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASL 1643
Query: 1293 AVDQSFYKFLIFDSNVLSETINNYVDYMITPSST---------------REVKEGPRCPK 1337
AV +F+K+ + + + I+N+V ++ + +E E PK
Sbjct: 1644 AVKFNFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEVPK 1703
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLEL 1389
LGD+ ES GAI LDSG +LN VWK+ + ++ S+L ++P+RELLE+
Sbjct: 1704 ALGDIFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPISPVRELLEM 1757
Score = 123 bits (308), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 166/676 (24%), Positives = 281/676 (41%), Gaps = 109/676 (16%)
Query: 413 IGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGL 465
+G+ T R ++ I+FV + TA +S + + NL FL C + + L
Sbjct: 463 VGLQQTGRSTTNLCGIIFVEQRYTAVVMSRLFKKLSKRDPNLHFLL---CSCIAMGSGRL 519
Query: 466 KSMSRNAMK---------SILEKFRSGELNLLVATKVGEEGLDI---QTCCLVIRFDLPE 513
+ ++A++ +L KFR E+N+LVAT E+G+++ C LV+RFD P
Sbjct: 520 GTTKKSAIQVQNQRRKHEEVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPT 579
Query: 514 TVASFIQSRGRARMPQSEY----------AFLVDSGNQRELDLIKNF-SKEEDRMNREIM 562
+ S++QS+ +AR P S Y FL D +E + + N SK + + E++
Sbjct: 580 SYQSYMQSKAKARAPTSHYLMLIYEPDVQLFLGDVQCYQEFERVLNRKSKGKTQPQEEVL 639
Query: 563 DRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D +D + I K + S + +++RYC+KLP D F + + G
Sbjct: 640 DLLVADKQMPA--YIPKNEEGSPRASMTTAIQIINRYCAKLPSDVFTHLTASCKMKERKG 697
Query: 623 GTI----CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQED 677
+ LP N+PI + I G + A +KA LHK G LNDYL P
Sbjct: 698 DVSPEFQATLQLPINSPIRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQPMGK 757
Query: 678 ----NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF- 732
AT++ +D + G + + ++ V L++ ++ P L M
Sbjct: 758 ESILKATDNAFNHLFADGQTRPGTTKKRQYYDKEVAKCLQECLPQADQPCYLYSVDMSLA 817
Query: 733 --IPDPAD----RIYRE------FGLFVKSLLP--------GEAEHLKVDLHLARGRSVM 772
+PD + R++R FG+ +P A L V + L S
Sbjct: 818 SPLPDILNIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSIML---ESDE 874
Query: 773 TKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV------ 826
+L S I +AQ F +L + N E P S YL++P+
Sbjct: 875 IRLSSSQIRRAQSFHGCMFSEVLRLDKPNLELNP--------EKSQANYLIVPLKEGPAG 926
Query: 827 -IFHKNSVDWKIIRRC-LSSPVFGTPGGSVDRKS-LPSHGPLQLHNGWSSESDVENSLVY 883
+ +DW + + LSS G +D+ + LP + Q +D + +Y
Sbjct: 927 PSGGPSVIDWSFLEKVSLSS-------GHLDQPTQLPDYSQSQFEFSTDILADAVVTPIY 979
Query: 884 AT-HKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRL 942
+ Y + +I+++ SP+ + VD+ Y I + + +QPL+ +
Sbjct: 980 RNIDQPQRYFMADILYDLPVTSPFPSEKYETFVDYYFERYDIQISNFQQPLVDVDCMSSR 1039
Query: 943 RNLLHNRKL------------EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
NLL R L ++ + + ++ + L PELC + I S + LP
Sbjct: 1040 LNLLTPRYLNHKGKALPISTGQNKKGNLQKKQY--LVPELCYIYPIPAS--LWRKAVCLP 1095
Query: 991 SIMHRLENLLVAIELK 1006
SI++RL LL+A EL+
Sbjct: 1096 SILYRLNALLIAEELR 1111
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 163/377 (43%), Gaps = 35/377 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
R YQLEL + A+E+N V L +G KT +AV+LI EL+ +R + IFL + +
Sbjct: 39 RHYQLELLETALEQNTTVCLQSGTEKTFLAVMLIKELSGSVRLRLEDGGKRTIFLVNSES 98
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+ + VI V+ + K + W+ EI+ V VM +I L L ++
Sbjct: 99 YLSEYGNVIHTHTDLNVKEYRNSDKMISWDRTRWQDEIEHCHVAVMDSEIFLKLLQMSYV 158
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ ++ LLI DECHH ++ HPY +IM F + PRI G+T S + KG
Sbjct: 159 GLSMLNLLILDECHHT-LQHLHPYHQIMLAFKQYPRDDRPRILGLTES--ILKGDFKPCA 215
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSP---VVRVYQYGPVINDTSSSYVTCSEQL 292
L + I+ LE L +K + + + + P V+ +Y I S ++ L
Sbjct: 216 LEEHIDMLETSLQSKAKIATNLTSISKYGTKPKEAVIVCRKYEDCIELVSKLSKLLTDGL 275
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRL--HDSMKFCLENLGVCGALHASYILLSG 350
++ + +Y S K D + K+ L ++ CL L G L ++
Sbjct: 276 DQLNQFEY----SFKARDFEGELVDCKRDPVLPARQALMECLSTLRTIGPLGVKILI--- 328
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQAS---EVFAAIC----RRDGIASDLSCIEVLKEP 403
+ E+++ E + D F A+ + IC R G DL
Sbjct: 329 -PMLVREILKLEKHEFLDVHLLFLQHATTQLRMVERICDNALREGGNFYDLK-------- 379
Query: 404 FFSKKLLRLIGILSTFR 420
F + K+ RL+ +LS F+
Sbjct: 380 FLTPKVRRLLEVLSGFK 396
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L++LT + F+LERLE+LGD+FLK AV +L+ + +DEG+L+ RS V+
Sbjct: 1254 SPTIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVS 1313
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPD 1135
N NL L + L ++ FDP ++ P + KE+ R + + PD
Sbjct: 1314 NFNLYCLGDKKALAHKMQVSLFDP----SINWLPPCLLVKESSRPVPKEETETDPD 1365
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 17/138 (12%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + RHL+ H + G LT RS VNN+ LA + N Y +
Sbjct: 1597 QRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFK-- 1654
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQ-----YDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+ F + + +K + SQ DG + + EV K
Sbjct: 1655 AYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEV----------PKA 1704
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E++ GA DSG
Sbjct: 1705 LGDIFESVAGAIYLDSGM 1722
Score = 44.7 bits (104), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1242 GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
G +RLE LGD+ L +T+YLY YP L G+L+ LRS V+N
Sbjct: 1270 GFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSN 1314
>gi|80979105|gb|ABB54755.1| Dicer-2 [Drosophila simulans]
gi|80979109|gb|ABB54757.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 252/540 (46%), Gaps = 106/540 (19%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1176 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCP---- 1114
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPGFAN 1295
Query: 1115 -------RICSKETERTI---------HSQY------DGR---APDDLNAEVRCSKGHHW 1149
R + + E ++ ++++ +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLALDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SASLDM-------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DYM-------------------ITPSS----------------TREVKEG--PR------ 1334
++ + P+ ++E ++G P+
Sbjct: 1536 NFQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMS 1595
Query: 1335 ----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ +P L+ F+ N+ +NPIR+L+E
Sbjct: 1596 TNVDVPKTLGDVLEALIAAIYLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1654
>gi|80979115|gb|ABB54760.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 240/540 (44%), Gaps = 106/540 (19%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F + AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1176 FSQEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRI-- 1116
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFAN 1295
Query: 1117 ----------------------CSK-ETERTIHS-QYDGR---APDDLNAEVRCSKGHHW 1149
CS + R + + +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLALDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SASLDM-------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DYM-----------------------------------------------ITPSSTREVK 1330
++ + P +
Sbjct: 1536 NFQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCISQKAEQGVPPKGEFNIS 1595
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ +P L+ F+ N+ +NPIR+L+E
Sbjct: 1596 TNVDVPKTLGDVLEALIAAIYLDCR-DLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1654
>gi|80979113|gb|ABB54759.1| Dicer-2 [Drosophila simulans]
Length = 1565
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 200/422 (47%), Gaps = 56/422 (13%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1176 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRI-- 1116
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFAN 1295
Query: 1117 ----------------------CSK-ETERTIHS-QYDGR---APDDLNAEVRCSKGHHW 1149
CS + R + + +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLTLDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SAS-------LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DY 1319
++
Sbjct: 1536 NF 1537
>gi|80979103|gb|ABB54754.1| Dicer-2 [Drosophila simulans]
Length = 1537
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 200/422 (47%), Gaps = 56/422 (13%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1176 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRI-- 1116
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFAN 1295
Query: 1117 ----------------------CSK-ETERTIHS-QYDGR---APDDLNAEVRCSKGHHW 1149
CS + R + + +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLTLDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SAS-------LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DY 1319
++
Sbjct: 1536 NF 1537
>gi|80979111|gb|ABB54758.1| Dicer-2 [Drosophila simulans]
Length = 1564
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 167/680 (24%), Positives = 280/680 (41%), Gaps = 84/680 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L++ + + KP S +F+ TV
Sbjct: 2 RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQA + + FKV + G + + W EI+ +VLV Q+ L + + +
Sbjct: 62 LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I+++I DECHH +HP+ + M+ F D +PR+ G+T + G S A
Sbjct: 122 ALNSISVVIIDECHHG--TRHHPFREFMRLFTIADQTNLPRVVGLTGVLIKGNEISKVAT 179
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ LE + +V D +++E+ V +Y P + + VT Q
Sbjct: 180 ---KLKELEITYRGNIITVSDTKEIEN------VMLYATKP-----TEAMVTFPHQEQGP 225
Query: 296 KREQYISALSRKLHDHQSLRNT-------TKQLNRLHDSMK------------FCLENLG 336
E++I A ++ L N +K L+ DS K + L+ G
Sbjct: 226 TVERFIIAQIKQFFVSLELMNIGVQPVRRSKSLHCQRDSSKKGFVKQMFNDFVYQLQEYG 285
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ A A L+ + R + + + + + R D
Sbjct: 286 IYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCERIRHLLVQKLRDMTDDDDGPD 345
Query: 397 IEVLKEP----FFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARA-----LSYIL 444
+V E F + K+ R + L + K C+VFV R T + L+YI
Sbjct: 346 DDVNTEDIIMNFSTPKIQRFLMSLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYIN 405
Query: 445 QNLKFLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ F+VG N+ + R KS ++KFR G NL++ + V EEG+D+
Sbjct: 406 STPELRDVLTPQFMVGRNSISPDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDV 465
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNR 559
Q C V D +T ++Q++GRAR P++++ F + ++ I + D +
Sbjct: 466 QACNHVFILDPLKTFNMYVQTKGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAE 525
Query: 560 EIMDRTSSDAFTCSEERIYKV------------DSSGACISAGYGVSLLHRYCSKLPHDE 607
+ +R +A +Y++ + GA + ++LLHRYC +P D
Sbjct: 526 YLKERVLEEAMP----ELYEIEKHFQDVIKPFTNEHGAVLLPSNALTLLHRYCQTIPTDA 581
Query: 608 FFNPKP-----------KFYYFDDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDAC 655
F P K + + + I +P N + I P + AK A
Sbjct: 582 FGFLIPWINLLEEGERNKLFGANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAA 641
Query: 656 LKAIEDLHKLGALNDYLLPQ 675
KA L+ LG L++ LP+
Sbjct: 642 FKACLALYSLGELSEKFLPK 661
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 200/422 (47%), Gaps = 56/422 (13%)
Query: 953 DSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
D++ E +EY+ + + G+ ++ ++ P++M + ++ +L +
Sbjct: 1117 DNQDFEDKEYWTKNQFHMPTGNVYGYRSPAKTNANV-PALMPSRPTVRGEVKPLLILQKT 1175
Query: 1013 FPEGAEVSAEM--LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGEL 1070
F E AE L A+T + F +ERLEILGD+FLK + +L + +EG L
Sbjct: 1176 FSEEHITPAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1235
Query: 1071 TRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRI-- 1116
T+ +S V+N NLL A ++ + F P AL R P
Sbjct: 1236 TQVKSKLVSNRNLLYCLADTDIPKKLNTILFTPRYTWVPPSISLPHNVLALWREKPEFAN 1295
Query: 1117 ----------------------CSK-ETERTIHS-QYDGR---APDDLNAEVRCSKGHHW 1149
CS + R + + +G+ A D ++EV G
Sbjct: 1296 MIGPHNLRDLTLDDEESLVKGNCSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVA 1355
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPL 1206
+ K IAD +EAL+G + + G + A L++ I ++ +++ N+ + SK+
Sbjct: 1356 IANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRSDIDKPLTELLNLELGSKNIRAN 1415
Query: 1207 SAS-------LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLD 1257
+ ++ + LE LG+ F R LLQA HPS+ NR+ G YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+LI++Y++ K+ PG LTDLRS LVNN A + V + F++ ++ LSETI+ +V
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535
Query: 1318 DY 1319
++
Sbjct: 1536 NF 1537
>gi|380706515|gb|AFD97515.1| dicer, partial [Hymenolepis microstoma]
Length = 1897
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 219/473 (46%), Gaps = 91/473 (19%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
M+L++LT + ++ERLE +GD+FLK+AV +L+L + EG L+ RS+ V NSN
Sbjct: 1416 MILQSLTRLAAGDFINMERLETIGDSFLKFAVTTYLYLKYPDAQEGSLSLFRSHVVENSN 1475
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L + L I F+P + + C +C+ + S + ++
Sbjct: 1476 LYRFGCGKKLPGRIVGVAFEPQENWLPP--C-YVCNSDNSSADDS-----------SRLQ 1521
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
+ H +L K+IAD VEALVG ++ + G ++A L+W G++ +S++ K
Sbjct: 1522 MVQTHQFLSNKSIADCVEALVGCYLTERGERSALKLLQWFGVECLPPSSEMQPTGAPWK- 1580
Query: 1203 FLPLSASLDMA---------------TLEILLGHQFLHRGLLLQAFVH---------PSF 1238
+P L A LE +G++F +R LL++A H PS
Sbjct: 1581 -MPDERGLTEAEKIEIDRIYHVSRYDKLENTIGYRFKNRRLLIEALTHSTCRDLHSNPSV 1639
Query: 1239 NRL-------GGCYQRLEFLGDAVLDYLITSYLY-----SVYPKLKPGQLTDLRSMLVNN 1286
N G Y+RLEFLGDAVLDY +T L+ +L PG LTDLRS LVNN
Sbjct: 1640 NNTPSSVFFGNGGYERLEFLGDAVLDYTVTRVLFESTDGETVRELSPGGLTDLRSALVNN 1699
Query: 1287 QAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDY-------------MITPSST------ 1326
F +AV + +L + L+E + ++ + ++TP S
Sbjct: 1700 AVFGALAVTHCGLHAYLRGTAPYLTEGTSAFLRHIRNVSRGSLNSKRLLTPDSNTVARLN 1759
Query: 1327 ---REVKEG---------PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPIL 1373
+ G PK LGD+ ES GA+ LDSG LNT+W+I L + I
Sbjct: 1760 DAENQADSGAVRPSNEMEAEVPKALGDVFESLAGAVFLDSGLCLNTLWRIFFPLLRERIE 1819
Query: 1374 KFSN-LQLNPIRELLELCNSYDLDLQF--PSLKKGGKFLAEAKVTGKDKDVFI 1423
++S + +P+R LLE Y ++F P ++ GK +V G + V I
Sbjct: 1820 RYSTCVAKSPVRRLLE---QYPERVKFEKPMVRPDGKIRLVVRVVGIGRYVGI 1869
>gi|321461347|gb|EFX72380.1| hypothetical protein DAPPUDRAFT_308316 [Daphnia pulex]
Length = 1741
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 149/271 (54%), Gaps = 35/271 (12%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT----NICISSKS 1202
H + K+IAD VEAL+GA++ G + A F+ W+G++V ++ + IS
Sbjct: 1414 QHSIPDKSIADCVEALIGAYLRACGPRGALLFMSWLGLKVLPVINEGSYGYWTPPISPLV 1473
Query: 1203 FLPLSASLDM-------ATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
PL +++ + E + ++F R LLQAF H S+ NRL CYQRLEFLGD
Sbjct: 1474 DQPLDIHVELDRMLAGFESFEEKICYKFNDRSYLLQAFSHASYYLNRLTDCYQRLEFLGD 1533
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
AVLDYLIT YLY P+ PG LTDLRS LVNN FA +A F+++ S L++ +
Sbjct: 1534 AVLDYLITRYLYENLPRHPPGALTDLRSALVNNTTFAVLAERYEFHRYFKHLSPSLNQIM 1593
Query: 1314 NNYVD-------------YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNT 1360
+ ++ YMI E PKVLGD+ ES GAI LDS +LN
Sbjct: 1594 DKFIKAQEENGHSINEEYYMIE-------AEDVEVPKVLGDVFESVAGAIYLDSHMSLNA 1646
Query: 1361 VWKIMLSFLDP-ILKFS-NLQLNPIRELLEL 1389
VW++ + + I +FS N+ +PIRELLEL
Sbjct: 1647 VWRVYYNMMKKEIDEFSKNVPKSPIRELLEL 1677
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 193/409 (47%), Gaps = 56/409 (13%)
Query: 356 NELIEAEGNTIDD-SLCRFASQASEVF---AAICRRDGIASDLSCIEVLKEPFFSKKLLR 411
+ L+ +EG T+ L SQ +E+ AI R+ + + P FS + R
Sbjct: 288 DSLVSSEGQTVQTPKLATETSQTAELIENGPAILRQSTTQPGHTSRR--RRPDFSNRHHR 345
Query: 412 LIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQN-------LKFLAS-WRCHFLVGVN 462
R + C ++F R TA+ L ++L++ L +L+ + + GV+
Sbjct: 346 -------NREDAYQLCGMIFTERRTTAKLLYHLLKDASRCDPQLAYLSPLYTVDRMEGVS 398
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
+ ++++FRS + N+LVAT V E+G+D+ C LVIR+DLP++ +++ S+
Sbjct: 399 VKEMENEERKQEDVMKRFRSRDCNILVATSVLEDGIDVPACHLVIRYDLPQSYRAYVHSK 458
Query: 523 GRARMPQSEYAFLVDSGNQRE--LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI--- 577
RAR ++ Y +V++ E +DL + E+ +++ + ++ F +E+ +
Sbjct: 459 ARARAKKAHYILMVENERMDEFLVDLSHFHATEQILLSKSGYHNSVAEFFNHNEDMLNCI 518
Query: 578 ---YKVD-SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY---YFDDLGGTICHIIL 630
Y D +S + S +S+++RYC+KLP D F P + F D+ IC + L
Sbjct: 519 QAPYPSDETSNSYASLQNAISIINRYCAKLPSDCFTRLTPVWRIQNVFLDV-AYICSLQL 577
Query: 631 PANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLF 687
P N+P+ + ++ P S AK+ A L+A LH+ L+D+ P +E+ E+E
Sbjct: 578 PINSPLRKTVLSQPMPSKVTAKRSAALEACRLLHQKKELDDHFYPTGKENLRLEEE---- 633
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDP 736
E +L E VP L + T R +Y+ Q + DP
Sbjct: 634 ---------EDYNADLEEENVPENLPRPGTTK----RRQYYYKQ-VADP 668
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+A T + +LERLE +GD+FLKYA+ +L+ + ++ EGEL+ RS V+
Sbjct: 1238 SPSVILQAFTMSSANDGINLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQVS 1297
Query: 1080 NSNLLKLAAR 1089
N +L +L +
Sbjct: 1298 NLHLYQLGKK 1307
Score = 48.9 bits (115), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK 208
W +E+ + +VLVM I L ++ F+KM + LLI D+CH+ V +N ++ +
Sbjct: 6 WTEELGKSQVLVMTYSIFLEVIHKNFLKMNKLNLLILDDCHN--VMNNEALKGVLTLYEN 63
Query: 209 PDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
PRI G+TAS V P ++ L +L+ K+ SV
Sbjct: 64 AASSVHPRILGLTASIVNNICK------PMELSQLITILETKLKSV 103
Score = 48.1 bits (113), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
++LQAF S N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V+N
Sbjct: 1240 SVILQAFTMSSAND-GINLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQVSN 1298
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 886 HKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNL 945
H + FY V I +E N S + D++ + + YGI +++ KQPLL N
Sbjct: 854 HPQCFY-VAEIFYELNPQSKFPDNNYPTFEKYYRHKYGIQIQNLKQPLLDVDHTSARLNF 912
Query: 946 LH----NRK---LEDSESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSI 992
L NRK L S H + + L PELC I FS + LP I
Sbjct: 913 LTPRYVNRKGVMLPTSSEHTKKTQRESLQQKQILVPELCS--IHPFSASLWRQAVCLPCI 970
Query: 993 MHRLENLLVAIELK 1006
++RL LL+A +L+
Sbjct: 971 LYRLNGLLLAEQLR 984
>gi|89114040|gb|ABD61611.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|342877213|gb|EGU78706.1| hypothetical protein FOXB_10811 [Fusarium oxysporum Fo5176]
Length = 927
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 186/665 (27%), Positives = 287/665 (43%), Gaps = 85/665 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++++ N+IV + TG GKT +AVL I A L R + FL TV+L +
Sbjct: 70 RAYQREMLEQSLKRNVIVAMDTGSGKTQVAVLRIQ--AELERSSPNKLVWFLGKTVSLCE 127
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ VI+ + G + + W + + ++V IL L H F+ M
Sbjct: 128 QQFNVIKRQMPSVPMRLLTGQLNIDAWSPEVWPRILKGTHIIVSTFSILRDALDHAFVTM 187
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASAQA 234
+++AL++FDE H+ VK N KIM +FY K M VP I G+TASP++
Sbjct: 188 DMLALIVFDEVHNC-VK-NSSGRKIMMNFYHRHKNVGMPVPAILGLTASPIISSDL---- 241
Query: 235 NLPKSINSLENLLDAK-VYSVEDAEDLESFVSSP--------VVRVYQYGPVINDTSSSY 285
K I LEN +DA V E L V+ P ++ P++ S Y
Sbjct: 242 ---KEIEKLENTMDAICVTPTTHREQLLKHVNKPHLIRLLYDATKIPPRTPLMQQLQSEY 298
Query: 286 VTCS-----EQLA--------EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL 332
E L E KRE+ ++ + + HD S +Q+ L + + L
Sbjct: 299 SNMDIAKDPEVLKLKALVSNDEKKREKLMNVIMK--HDTFS----QQQIRGLWNKSREIL 352
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEG-NTIDDSLCRFASQASEVFAAICRRDGIA 391
LG H YI + ++ L + +T D+ ++++ A RR I
Sbjct: 353 AELGSWAVDH--YI----SQMIKTFLDRIDAYSTFTDA---WSNEDRTYLAGHLRRINIG 403
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
+ + S K RLI L + + I+FV A L +L N +
Sbjct: 404 VVDNSPPTAQT--VSHKTSRLIHEL--LAAENDVVGIIFVKERTAAHTLCELLNNYPPI- 458
Query: 452 SWRCHFLVGVNAGLKSMSRNAMK----------SILEKFRSGELNLLVATKVGEEGLDIQ 501
R + VG G S K +L+ FRSG +NLLVAT V EEG+D+
Sbjct: 459 --RDRYHVGAIVGASSYGLQKQKVYEYSSGPGPQVLDDFRSGAINLLVATSVLEEGIDVP 516
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEY-AFLVDSGNQRELDLIKNFSKEEDRMNRE 560
C LV+ FD T+ SFIQ RGRARM +S+ A L S + R + ++ KE ++
Sbjct: 517 ACNLVVSFDEIATLKSFIQRRGRARMQESKMIALLSSSTDIRAWEELEKGMKERYEDDQR 576
Query: 561 IMDRTSSDAFTCS-EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
+ R A + Y V ++GA + L R+C + ++ P + +
Sbjct: 577 ELARLDEQARAEEIDSTYYIVKNTGARLDLDNARQHLDRFCQIVFRSDYVGQLPDYVFHK 636
Query: 620 D---LGGTICH--IILPANAPIHQIVGTPQS-----SMEAAKKDACLKAIEDLHKLGALN 669
+ GG I + LP P++ + T +S S A +DA +A L++ G +
Sbjct: 637 EETPYGGPILRATVTLPGGLPLN--LRTFKSACGWKSERNAMRDAAFQAYVALYEAGLVT 694
Query: 670 DYLLP 674
D L P
Sbjct: 695 DNLAP 699
>gi|89114036|gb|ABD61609.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 187/382 (48%), Gaps = 87/382 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----EFEA-SQVTNICISSKS--- 1202
K+IAD VEAL+GA++ + G + A F+ W+G++V + + +Q I S+K
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEXRIPGSTKPNAE 1902
Query: 1203 ------------------FLPLSASLDMATL-------EILLGHQFLHRGLLLQAFVHPS 1237
F P +A+ ++ L E LG++F R LLQA H S
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAP-NATXELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHAS 1961
Query: 1238 F--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1962 YTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVR 2021
Query: 1296 QSFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2022 HGFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI---FHKNSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 1180 KWIGIQVE-FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF 1238
K + +Q E E T S + LP S D L+GH ++LQA +
Sbjct: 1621 KQLKLQYERMEIQPXTPTKAISSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNA 1678
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + +
Sbjct: 1679 ND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRL 1737
Query: 1299 YKFLI 1303
+++I
Sbjct: 1738 GEYMI 1742
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATXELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114050|gb|ABD61616.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 184/381 (48%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------------EFEAS 1191
K+IAD VEAL+GA++ + G + A F+ W+G++V + A
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1192 QVTNI---CISSKS----FLP-LSASLD-----MATLEILLGHQFLHRGLLLQAFVHPSF 1238
V + +S+S F P + LD E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTSRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114048|gb|ABD61615.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 164 bits (414), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRHLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI---FHKNSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERKAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|283131646|dbj|BAI63215.1| Dicer [Hemicentrotus pulcherrimus]
Length = 1816
Score = 164 bits (414), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 153/293 (52%), Gaps = 50/293 (17%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV----------------EFEA 1190
H + K+IAD VEAL+G ++ GF++A + W+G+ V + A
Sbjct: 1466 QHSMSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGLDVLPAINDQSKKRNDQSSDLPA 1525
Query: 1191 SQVTNICISS---KSFLPLSASLDMAT------------LEILLGHQFLHRGLLLQAFVH 1235
+ + C+ + PL S+ A E + ++F R LLQAF H
Sbjct: 1526 ADLPVSCLYGYLKQPESPLLRSVPNAEDVLQQQLVGYDGFEKTINYRFKDRAYLLQAFTH 1585
Query: 1236 PSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA 1293
S++R + CYQRLEFLGDA+LDYLIT +LY + L PG LTDLRS LVNN FA++A
Sbjct: 1586 SSYHRNSITDCYQRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLA 1645
Query: 1294 VDQSFYKFLIFDSNVLSETINNYVDYMITPSST---------------REVKEGPRCPKV 1338
V +F+K+ + + + I+N+V ++ + +E E PK
Sbjct: 1646 VKFNFHKYFKAYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEVPKA 1705
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLEL 1389
LGD+ ES GAI LDSG +LN VWK+ + ++ S+L ++P+RELLE+
Sbjct: 1706 LGDIFESVAGAIYLDSGMSLNAVWKVYYPMMKQQIEQYASDLPISPVRELLEM 1758
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 164/675 (24%), Positives = 280/675 (41%), Gaps = 106/675 (15%)
Query: 413 IGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL----VGVNAG-LKS 467
+G+ T R ++ I+FV + TA +S + + L HFL + + +G L +
Sbjct: 464 VGLQQTGRSTTNLCGIIFVEQRYTAVVMSRLFKKLS-KRDPNLHFLLCSCIAIGSGRLGT 522
Query: 468 MSRNAMK---------SILEKFRSGELNLLVATKVGEEGLDI---QTCCLVIRFDLPETV 515
++A++ +L KFR E+N+LVAT E+G+++ C LV+RFD P +
Sbjct: 523 TKKSAIQVQNQRRKHEEVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPASY 582
Query: 516 ASFIQSRGRARMPQSEY----------AFLVDSGNQRELDLIKNF-SKEEDRMNREIMDR 564
S++QS+ +AR P S Y FL D +E + + N SK + + E++D
Sbjct: 583 QSYMQSKAKARAPTSHYLMLIYEPDVQLFLSDVQCYQEFERVLNRKSKGKTQPQEEVLDL 642
Query: 565 TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
+D + I K + S + +++RYC+KLP D F + + G
Sbjct: 643 LKADKQMPA--YIPKNEEGSPRASMTTAIQIINRYCAKLPSDVFTHLTASCKMQERKGDV 700
Query: 625 I----CHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQED-- 677
+ LP N+P+ + I G + A +KA LHK G LNDYL P
Sbjct: 701 SPEFQATLQLPINSPLRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQPMGKES 760
Query: 678 --NATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF--- 732
AT++ +D + G + ++ V L+ ++ P L M
Sbjct: 761 ILKATDNAFNHLFADGQTRPGTTKKRRYYDKEVAKCLQGCLPQADQPCYLYSVDMSLASP 820
Query: 733 IPDPAD----RIYRE------FGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTK 774
+PD + R++R FG+ +P A L V + L S +
Sbjct: 821 LPDILNIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSITL---ESNEIR 877
Query: 775 LVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV-------- 826
L + I +AQ F +L + N E P S YL++P+
Sbjct: 878 LSGAQIRRAQSFHGCMFSEVLRLDKPNLELNP--------EKSQANYLIVPLKEGPARGP 929
Query: 827 IFHKNSVDWKIIRRC-LSSPVFGTPGGSVDRKS-LPSHGPLQLHNGWSSESDVENSLVYA 884
+ +DW + + LSS G +D+ + LP + Q +D + +Y
Sbjct: 930 SGGPSVIDWSFLEKVSLSS-------GHLDQPTQLPDYSQSQFEFSTDILADAVVTPIYR 982
Query: 885 T-HKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
+ Y + +I+++ SP+ + VD+ Y I + + +QPL+ +
Sbjct: 983 NIDQPQRYFMADILYDLPVTSPFPSEKYETFVDYYFERYDIQISNFQQPLVDVDCMSSRL 1042
Query: 944 NLLHNRKL------------EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
NLL R L ++ + + ++ + L PELC + I S + LPS
Sbjct: 1043 NLLTPRYLNHKGKALPISTGQNKKGNLQKKQY--LVPELCYIYPIPAS--LWRKAVCLPS 1098
Query: 992 IMHRLENLLVAIELK 1006
I++RL LL+A EL+
Sbjct: 1099 ILYRLNALLIAEELR 1113
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 161/377 (42%), Gaps = 35/377 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
R YQLEL + A+E+N V L +G KT +AV+LI EL+ +R + IFL + +
Sbjct: 39 RHYQLELLETALEQNTTVCLQSGTEKTFLAVMLIKELSGSVRLRLEDGGKRTIFLVNSES 98
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+ + VI V+ + K + W+ EI+ V VM +I L L ++
Sbjct: 99 YLSEYGNVIHTHTDLNVKEYRNREKMISWDKTRWQDEIEHCHVAVMDSEIFLKLLQMSYV 158
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ + LLI DECHH ++ HPY +IM F + PRI G+T S + KG
Sbjct: 159 GLSMFNLLILDECHHT-LQHLHPYHQIMLAFNQCPRDDRPRILGLTES--ILKGDFKPCA 215
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSP---VVRVYQYGPVINDTSSSYVTCSEQL 292
L K I+ LE L + + + + + P V+ +Y + S ++ L
Sbjct: 216 LEKHIDMLETSLQSTAKIATNLTSISKYGTKPKEAVIVCRKYEDCVELVSKLSKLLTDGL 275
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRL--HDSMKFCLENLGVCGALHASYILLSG 350
++ + +Y S K D + K+ L ++ CL L G L ++
Sbjct: 276 DQLNQFEY----SFKARDFEGELVDCKRDPVLPARQALMECLSTLTTIGPLGVKILI--- 328
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQAS---EVFAAIC----RRDGIASDLSCIEVLKEP 403
+ EL++ E + D F A+ + IC R G DL
Sbjct: 329 -PMLVRELLKLEKHEFLDVHLLFLQHATTQLRMVERICDNALREGGNFYDLK-------- 379
Query: 404 FFSKKLLRLIGILSTFR 420
F + K+ RL+ +L+ F+
Sbjct: 380 FLTPKVRRLLEVLAGFK 396
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L++LT + F+LERLE+LGD+FLK AV +L+ + +DEG+L+ RS V+
Sbjct: 1255 SPTIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVS 1314
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPD 1135
N NL L + L ++ FDP ++ P + KE+ + I + PD
Sbjct: 1315 NFNLYCLGEKKALAHKMQVSLFDP----SINWLPPCMLVKESSKPIPKEETETDPD 1366
Score = 54.3 bits (129), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 17/138 (12%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + RHL+ H + G LT RS VNN+ LA + N Y +
Sbjct: 1598 QRLEFLGDALLDYLITRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFK-- 1655
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQ-----YDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+ F + + +K + SQ DG + + EV K
Sbjct: 1656 AYTANMFQVIDNFVTFVDAKNEALGMDSQLKYSEMDGEQEESEDIEV----------PKA 1705
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E++ GA DSG
Sbjct: 1706 LGDIFESVAGAIYLDSGM 1723
Score = 45.1 bits (105), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1242 GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
G +RLE LGD+ L +T+YLY YP L G+L+ LRS V+N
Sbjct: 1271 GFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSN 1315
>gi|89114044|gb|ABD61613.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 164 bits (414), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEKRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|195391256|ref|XP_002054279.1| GJ24359 [Drosophila virilis]
gi|194152365|gb|EDW67799.1| GJ24359 [Drosophila virilis]
Length = 2250
Score = 164 bits (414), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 176/365 (48%), Gaps = 66/365 (18%)
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
H + K+IAD VEAL+GA++ + G + A F+ W+G++V + T I + +P
Sbjct: 1895 SQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYKLEPTAAAIEQR--MP 1952
Query: 1206 LSASLDM-------------------------ATLEILL----------GHQFLHRGLLL 1230
S D+ A LE LL G+ F R LL
Sbjct: 1953 GSTKPDLNNMITVYGDWPTPRSPLLHFAPNANAELEHLLSGFEEFESSLGYTFSDRSYLL 2012
Query: 1231 QAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
QA H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN
Sbjct: 2013 QAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTI 2072
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITPSSTR------EVKEGPRCP 1336
FA++AV F+K+ S L++ I+ +V ++I+ + E P
Sbjct: 2073 FASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGHIISEEYYLLSEEECDDAEDVEVP 2132
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYD 1394
K LGD+ ES GAI LDS +L+ VW++ + + P I +FSN + +PIRELLEL
Sbjct: 2133 KALGDVFESIAGAIFLDSNMSLDVVWQVYSNMMKPEIEQFSNSVPKSPIRELLEL----- 2187
Query: 1395 LDLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAA 1450
P K GK LA+ + DVF + R I A++ +LK
Sbjct: 2188 ----EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQ 2243
Query: 1451 GYVPK 1455
G + K
Sbjct: 2244 GLIAK 2248
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1716 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1775
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L Y+ F+P
Sbjct: 1776 NLNLYRLGRRKRLGEYMIATKFEP 1799
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 488 LIYCNQNHTARVLFELLAELSRRDPDLKFL---RCQYTTDRVADPATEPKEAEQEHRRQE 544
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 545 DVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHIM 604
Query: 535 LV 536
LV
Sbjct: 605 LV 606
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 196/495 (39%), Gaps = 80/495 (16%)
Query: 582 SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC----HIILPANAPI- 636
S+GA + ++L+++YC++LP D F + + + + LP N+P+
Sbjct: 811 STGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCARSVRQGVVLFQYTLRLPINSPLK 870
Query: 637 HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TED 682
H IVG P + A++ A +A +LHK+G L+D L P ED
Sbjct: 871 HDIVGLPMPTQTLARRLAAFQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPED 930
Query: 683 EPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD-- 735
E ++ +D + G R + + + + + P L YF+Q IP+
Sbjct: 931 EHIVQQND-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQ 987
Query: 736 --------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSG 779
P + + FG+ +P + +KV L LAR R V+T+ S
Sbjct: 988 NTRGRKIYPPEEARQGFGILTLKRIPKLSAFSIFTRSGEVKVSLELARERVVLTQEQISC 1047
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS--VDWKI 837
I F +L +F F P +S+ + +++ V ++S +DW+
Sbjct: 1048 I---NVFLNYTFTNVLRLQKFLMLFDP-------DSTENCVFIVPTVKTEQDSRIIDWQF 1097
Query: 838 IRRCLSS-PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNI 896
+ ++ + P +R++ P + + V + ++ V I
Sbjct: 1098 LELIQATGNLMPQPVPDGERQAQP-------FDAQRFQDAVVMPWYRNQDQPQYFYVAEI 1150
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK-- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1151 CPHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTAQPLLDVDHTSARLNFLTPRYVNRKGV 1210
Query: 951 -----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
E+++ + E E L PELC + F + + LP I++R+ LL+A
Sbjct: 1211 ALPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLAD 1268
Query: 1004 ELKHLLSASFPEGAE 1018
+++ +SA G +
Sbjct: 1269 DIRKQVSADLGLGRQ 1283
Score = 48.5 bits (114), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ LE+LL E + L +F + + + M + T + + + +RLE
Sbjct: 1977 LHFAPNANAELEHLLSGFEEFESSLGYTFSDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2034
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ Y R
Sbjct: 2035 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFR 2087
Score = 48.1 bits (113), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L+GH ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1709 LVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1767
Query: 1278 DLRSMLVNN 1286
LRS V N
Sbjct: 1768 HLRSKQVAN 1776
Score = 47.4 bits (111), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 14/230 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTV-ALV 118
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ K + ++L+ + A
Sbjct: 18 RDFQVELLASAFERNTIICLGHRSSKEFIALKLLQELSRPGRRNGK-VSVYLSSQIDAEA 76
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
++ KV +HC W Y V + P L L + +
Sbjct: 77 TSMYTMLTHLTDLKVWQEQPDQHVPSNHC-WTD----YHVSIHKPSTFLSLLQSGDLLLS 131
Query: 179 LIALLIFDECHHAQV-KSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVVGKGASAQANL 236
I L++ ++CH + V +S P I +DF P PRI G+ A P+ + L
Sbjct: 132 SIQLIVLEDCHDSSVYRSILP---IFEDFILPAKPSDRPRILGL-AGPLHSADCELE-EL 186
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+++LE + ++ + D + + + P + Q P D S +
Sbjct: 187 NAMLDTLEQQMLCRIETASDIVTVLRYCAKPHEYIVQCAPFEMDQLSRVI 236
>gi|89114038|gb|ABD61610.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114042|gb|ABD61612.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|350855011|emb|CAZ36047.2| dicer-1, putative [Schistosoma mansoni]
Length = 2319
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 208/500 (41%), Gaps = 139/500 (27%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT + +LER+E +GD+FLK+ V HL+L + EG+L+ RS V NSNL
Sbjct: 1751 ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSNL 1810
Query: 1084 LKLAARNNLQVYIRDQPFDP---------------------CQFFALGRR-----CPRIC 1117
+L +LQ + F+P + F R +
Sbjct: 1811 YRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIWSTDTLM 1870
Query: 1118 SKETERTIH---------------SQYDGRAPDDLNAEVRCSKG----HHWLHKKTIADV 1158
E R I S++D P L+A+ ++ + K+IAD
Sbjct: 1871 DDEVLRNIDFIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIPDKSIADC 1930
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD------- 1211
VEAL+G ++ G ++A ++W GI S + + LP S LD
Sbjct: 1931 VEALIGCYLTTRGERSALRLMQWFGIDC-LHKSDNSQPTARAPWSLPKSNYLDTDENRAN 1989
Query: 1212 ---------MATLEILLGHQFLHRGLLLQAFVHPSFNRLG-------------------- 1242
LE L + F LL+QAF HPS+++L
Sbjct: 1990 LNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNLMFSTDL 2049
Query: 1243 GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
CYQRLEFLGDAVLDY+IT +LY + PG LTDLRS LVNN FA +AV +K+
Sbjct: 2050 DCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLHKYF 2109
Query: 1303 IFDSNVLSETINNYVDY----------MITPSS--------------------------- 1325
S L TI+ +V Y IT S
Sbjct: 2110 RASSPQLLHTIDVFVRYQKDVAKDDLDFITNESENQSSKPQHQTYEQHLSKSGKSNNANN 2169
Query: 1326 ----------TREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK- 1374
T + + PK L D+ ES GAI LDS F+L+TVW+I PI+K
Sbjct: 2170 TIPTNTGHLTTNRLSDDVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFY----PIMKE 2225
Query: 1375 -----FSNLQLNPIRELLEL 1389
+ + +P+R+LLEL
Sbjct: 2226 RIERYTACIPKSPVRQLLEL 2245
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 477 LEKFRSGELNLLVATK-----VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
+ FR G +NLLVAT+ V G ++ C LVI LP ++A ++ S+ R+R+
Sbjct: 633 ITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRL 688
>gi|89114046|gb|ABD61614.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEIGRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVI---FHKNSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERKAQPFDAQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLKIQNASQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
S + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 SSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114032|gb|ABD61607.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNPE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 48.9 bits (115), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
+ + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 TSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114022|gb|ABD61602.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
++E E T S+ LP S D L+GH ++LQA + N G
Sbjct: 1629 RIEIEPPTSTKAITSA--ILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GIN 1683
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1684 LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114030|gb|ABD61606.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 48.9 bits (115), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
+ + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 TSALLPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114024|gb|ABD61603.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
++E E T IS+ LP S D L+GH ++LQA + N G
Sbjct: 1629 RIEIEPPTSTKAIISA--ILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GIN 1683
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1684 LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|195109134|ref|XP_001999145.1| GI24348 [Drosophila mojavensis]
gi|193915739|gb|EDW14606.1| GI24348 [Drosophila mojavensis]
Length = 2256
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 173/363 (47%), Gaps = 62/363 (17%)
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI-----QVEFEASQVTN----- 1195
H + K+IAD VEAL+GA++ + G + A F+ W+GI Q+E A+ +
Sbjct: 1901 SQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPYQLEPAAADIEQRKPGS 1960
Query: 1196 --------ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQA 1232
+ + P S L A E LG+ F R LLQA
Sbjct: 1961 TKPDANNMVTVYGDWPTPRSPLLHFAPNAHRELEELLSGFEEFEASLGYTFRDRSYLLQA 2020
Query: 1233 FVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA
Sbjct: 2021 MTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFA 2080
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPKV 1338
++AV F+K+ S L++ I+ +V +Y + + E PK
Sbjct: 2081 SLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKA 2140
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLD 1396
LGD+ ES GAI LDS +L+ VW++ + + P I +FSN + +PIRELLEL
Sbjct: 2141 LGDVFESIAGAIFLDSNMSLDVVWQVFSNMMKPEIEQFSNSVPKSPIRELLEL------- 2193
Query: 1397 LQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGY 1452
P K GK LA+ + DVF + R I A++ +LK G
Sbjct: 2194 --EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGL 2251
Query: 1453 VPK 1455
+ K
Sbjct: 2252 IAK 2254
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1725 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1784
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L Y+ F+P
Sbjct: 1785 NLNLYRLGRRKRLGEYMIATKFEP 1808
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 494 LIYCNQNHTARVLFELLAELSRRDPDLKFL---RCQYTTDRVADPATEPKEAELEHRRQE 550
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LVIR+D P T S++Q +GRAR + +
Sbjct: 551 DVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVIRWDPPTTYRSYVQCKGRARAAPAYHIM 610
Query: 535 LV 536
LV
Sbjct: 611 LV 612
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 207/498 (41%), Gaps = 86/498 (17%)
Query: 582 SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL--GGTICH--IILPANAPI- 636
S+GA + ++L+++YC++LP D F + + G T+ + LP N+P+
Sbjct: 820 STGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCASVVRDGVTLYQYTLRLPINSPLK 879
Query: 637 HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QE------------DNATED 682
H I+G P + A++ A L+A +LHK+G L+D L P +E D ED
Sbjct: 880 HDIIGLPMPTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFDLEPED 939
Query: 683 EPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD-- 735
E ++ +D + G R + + + + + P L YF+Q IP+
Sbjct: 940 EQIVQQND-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQ 996
Query: 736 --------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSG 779
P + + FG+ +P + +KV L LAR R V+T+ S
Sbjct: 997 NTRGRKIYPPEEAQQGFGILTLKRIPKLSAFSIFTRSGEVKVSLELARDRVVLTEEQISC 1056
Query: 780 IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR 839
I +FL +F+ L D S+ ++P I +++ D +II
Sbjct: 1057 I-------NVFLNYTFTNVLRLQKFLMLFDPD----STENCVFIVPTI--RSTADSRIID 1103
Query: 840 RCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESD-VENSLVYATHK-----KWFYLV 893
+ T G++ +P P + S ++ ++++V ++ ++FY V
Sbjct: 1104 WQFLELIQAT--GNM----MPQPVPDEERQKQSFDAQRFQDAVVMPWYRNQDQPQYFY-V 1156
Query: 894 TNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NR 949
I + S + + + + YG+ +++ QPLL N L NR
Sbjct: 1157 AEICPHLSPLSCFPGDHYRTFKHYYLVKYGLTIQNAAQPLLDVDHTSARLNFLTPRYVNR 1216
Query: 950 K-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLL 1000
K E+++ + E E L PELC + F + + LP I++R+ LL
Sbjct: 1217 KGVALPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLL 1274
Query: 1001 VAIELKHLLSASFPEGAE 1018
+A +++ +SA G +
Sbjct: 1275 LADDIRKQVSADLGLGRQ 1292
Score = 48.5 bits (114), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L+GH ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1718 LVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1776
Query: 1278 DLRSMLVNN 1286
LRS V N
Sbjct: 1777 HLRSKQVAN 1785
Score = 47.8 bits (112), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ LE LL E + L +F + + + M + T + + + +RLE
Sbjct: 1983 LHFAPNAHRELEELLSGFEEFEASLGYTFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2040
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ Y R
Sbjct: 2041 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFR 2093
>gi|89114020|gb|ABD61601.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 1179 LKWIGIQVE-FEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+K + +Q E E T+ + + LP S D L+GH ++LQA +
Sbjct: 1620 VKQLKLQYERIEIEPPTSTKAITSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSN 1677
Query: 1238 FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS 1297
N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + +
Sbjct: 1678 AND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKR 1736
Query: 1298 FYKFLI 1303
+++I
Sbjct: 1737 LGEYMI 1742
Score = 45.8 bits (107), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114028|gb|ABD61605.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (413), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMA---------------TLEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEKFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 48.9 bits (115), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
+ + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 TSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEKFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|89114034|gb|ABD61608.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDKERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 49.7 bits (117), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
++E E T S+ LP S D L+GH ++LQA + N G
Sbjct: 1629 RIEIEPPTSTKAITSA--ILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GIN 1683
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1684 LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L++LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDHLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|350630584|gb|EHA18956.1| hypothetical protein ASPNIDRAFT_42773 [Aspergillus niger ATCC 1015]
Length = 1498
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 169/632 (26%), Positives = 270/632 (42%), Gaps = 90/632 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL ++A +N I L T EL + I FL +V L
Sbjct: 118 REYQLELFERAKVQNTIAVLDTE-----------KELNDRVEGKPHRIAFFLVDSVTLAY 166
Query: 120 QQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQA V+ ++ V F G L S W++ + V+V +IL CL + +IKM
Sbjct: 167 QQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNSYIKMS 226
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQANLP 237
I +LIFDE HH K +HPYA+I++D Y ++ K PRIFGMTASP+ KG ++
Sbjct: 227 QINILIFDEAHH--TKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG-----DIV 279
Query: 238 KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY----------VT 287
LE LLD+++ + + L V PV RV+ + + ++S +
Sbjct: 280 DEATRLEKLLDSRIATTSNMSLLRQVVRRPVERVWSFNKLEQPFATSLYKHLEDRFGDMA 339
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGALHASYI 346
C E + Q S L R D R L +L S++ + ++Y
Sbjct: 340 CLEGIFRFAW-QASSELGRWCSDRAWARALADDVLPKLEGSVRKTANSETSSNVPESAY- 397
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFS 406
E +R E + I S +A + E F + + ++VL+E
Sbjct: 398 ----KEILRI----TEASEIVKS---YAFSSPETFGQLSPK---------VQVLRE---- 433
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN---- 462
+L R G Q KCIVF + TA L+ + Q L + R L+GV
Sbjct: 434 -ELARYFG------RQTETKCIVFTQKRYTALILAELFQTLD-IPFLRPGVLIGVRSGDL 485
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
AG+ R S++ KFR+GE+N LV T + CL + + L AS ++
Sbjct: 486 AGMNITFRQQFISLV-KFRTGEINCLVNTHI----------CLPV-YQLLINYASMVE-- 531
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKE--EDRMNREIMDRTSSDAFTCSEERIYKV 580
R + + V + ++++F + EDR+ + R +++
Sbjct: 532 -RGNLEHEQRLLEVQDAEK----IMQSFCRTLPEDRLLYGFDHDLDTVLQKDEGNRTFRI 586
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIV 640
S+GA ++ ++L RY S L +++ F+ + + G +C +ILP +PI +
Sbjct: 587 KSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGAFVCEVILPEKSPIRGLT 646
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
G+P AK+ A L K L+D+
Sbjct: 647 GSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHF 678
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 210/493 (42%), Gaps = 75/493 (15%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
H QP+LRA+ + RNLL K+ D+E F + P LK+ S
Sbjct: 923 HWDQPVLRAELVRLRRNLLD--KMTDTERDVETRCFICIEP----LKVSAIPASTAFSCL 976
Query: 988 LLPSIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFS 1038
P+I+ R++ L++++ L+ +F + ++ + E + + ++ R +
Sbjct: 977 AFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGR-N 1035
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD FLK A LF + DE + R + N NL A + YIR
Sbjct: 1036 YERLEFLGDCFLKMATSISLFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1095
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ F ++ G + + K+ R ++ H L +KTIADV
Sbjct: 1096 RGFSRHTWYPEGLKL--LQGKDHSRKA-----------------TTESKHALAEKTIADV 1136
Query: 1159 VEALVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSAS 1209
EAL+GA + G KA T + + E ++ I + A
Sbjct: 1137 CEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQRRAADGAE 1196
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLY 1265
L ++ LE L ++F + LL AF HPS+ CYQRLEFLGD+++D + L+
Sbjct: 1197 LYLSRKLEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLF 1256
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY--------- 1316
+ +P P LT+ + +V+N+ +AV + L + S L I Y
Sbjct: 1257 ARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEG 1316
Query: 1317 -----VDY---------MITPSSTREVKE-GPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
VDY ++TPS+ R +C L D+VE+ +GA+ +DS FN +
Sbjct: 1317 ESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQC---LPDMVEAYVGAVFVDSDFNFEVI 1373
Query: 1362 WKIMLSFLDPILK 1374
+ ++ P +
Sbjct: 1374 ERFFRDYIKPFFE 1386
>gi|195037032|ref|XP_001989969.1| GH18503 [Drosophila grimshawi]
gi|193894165|gb|EDV93031.1| GH18503 [Drosophila grimshawi]
Length = 2254
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 172/365 (47%), Gaps = 66/365 (18%)
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------EFEASQV 1193
H + K+IAD VEAL+GA++ + G + A F+ W+G++V E A
Sbjct: 1899 SQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYKLVPTAADDERRAPGT 1958
Query: 1194 TN------ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQA 1232
+ + I P S L A E LG++F R LLQA
Sbjct: 1959 SKPNAKNMVTIYGAWPTPRSPLLHFAPNATVELEHLLSGFEEFEASLGYKFRDRSYLLQA 2018
Query: 1233 FVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
H S+ NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA
Sbjct: 2019 MTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFA 2078
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK--------------EGPRCP 1336
++AV F+K+ S L++ I+ +V I + + E P
Sbjct: 2079 SLAVRHGFHKYFRHLSPGLNDVIDRFV--RIQQENGHSISEEYYLLSEEECDDAEDVEVP 2136
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYD 1394
K LGD+ ES GAI LDS +L+ VW++ + + P I +FSN + +PIRELLEL
Sbjct: 2137 KALGDVFESIAGAIFLDSDLSLDVVWRVYSNMMKPEIEQFSNSVPKSPIRELLEL----- 2191
Query: 1395 LDLQFPSLKKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAA 1450
P K GK LA+ + DVF + R I A++ +LK
Sbjct: 2192 ----EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQ 2247
Query: 1451 GYVPK 1455
G + K
Sbjct: 2248 GLIAK 2252
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1720 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYMTYENVHEGKLSHLRSKQVA 1779
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L Y+ F+P
Sbjct: 1780 NLNLYRLGRRKRLGEYMIATKFEP 1803
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 496 LIYCNQNHTARVLFELLAEMSKRDPDLKFL---RCQYTTDRIANPATEPKEAEQEHRRQE 552
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 553 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHIM 612
Query: 535 LV 536
LV
Sbjct: 613 LV 614
Score = 55.5 bits (132), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTV-ALV 118
R +Q+EL A E N I+ LG K IA+ L+ E + R+ K + ++L+ + A
Sbjct: 18 RDFQVELLASAFERNTIICLGHKSSKEFIALKLLQEFSRRGRRNGK-MSVYLSSQIDAEA 76
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
++ KV + +HC W Y V + P+ L L +R I +
Sbjct: 77 TSMYTMLTHLTDLKVWQEQPDQQVPLNHC-WA----DYHVSIHKPESFLILLQNRDILLS 131
Query: 179 LIALLIFDECHHAQV-KSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVVGKGASAQANL 236
+ L++ ++CH + V +S P I ++F +P PRI G+ A P+ G + L
Sbjct: 132 SVQLIVLEDCHDSAVYRSVLP---IFEEFVQPAKPCDRPRILGL-AGPLHSAGCELE-EL 186
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
+N+LE + + + D + + + P+ + Q P D SS
Sbjct: 187 NAMLNTLEQHMLCSIETASDIVTVLRYCARPLEYIVQCAPFEVDQLSS 234
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 111/529 (20%), Positives = 212/529 (40%), Gaps = 108/529 (20%)
Query: 563 DRTSSDAFTC--SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP------- 613
++ +D FTC + + S+ A + ++L+++YC++LP D F
Sbjct: 798 EQREADRFTCCLAAYQPRPGLSTAASVDLSTAIALVNKYCARLPSDTFTKLTALWRCASS 857
Query: 614 -----KFYYFDDLGGTICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLHKLGA 667
K Y + + LP N+P+ + IVG P + A++ A +A +LHK+G
Sbjct: 858 ERQGIKLYQYT--------LRLPINSPLKYDIVGLPMPTQTLARRLAAFQACVELHKIGE 909
Query: 668 LNDYLLP--QE------------DNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR 713
L+D L P +E D EDE ++ +D + G R + + + +
Sbjct: 910 LDDQLQPIGKEGFRALEPDWECFDLEPEDEQIVQQND-EPRPGTTKRRQYYYKRIASEFC 968
Query: 714 QSWTKSQYPVRLNFYFMQF-----IPD----------PADRIYREFGLFVKSLLP----- 753
P L YF+Q IP+ P + + FG+ +P
Sbjct: 969 DCRPVPDVPCYL--YFIQLTLQCPIPEEQNTRGRKIYPPEEAQQGFGILTLKRIPKLSAF 1026
Query: 754 ---GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKD 810
+ +KV L LAR R V+T + I F +L +F F P
Sbjct: 1027 SIFTRSGEVKVSLELARERVVLTS---AQIDCINVFLNYTFTNVLRLQKFLMLFDP---- 1079
Query: 811 DYCESSSSTFYLLLPVIFHKNS--VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLH 868
+S+ + +++ V +++ +DWK + ++ G++ +P P +
Sbjct: 1080 ---DSTENCVFIVPTVRAERDNRLIDWKFLELIQAT-------GNM----MPQPVPDEER 1125
Query: 869 NGWSSESD-VENSLVYATHK-----KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSY 922
+ E+ ++++V ++ ++FY V I + S + + + + + Y
Sbjct: 1126 QEQAFEAQRFQDAVVMPWYRNQDQPQYFY-VAEICPHLSPLSCFPGDNYRTFKHYYLVKY 1184
Query: 923 GIHLKHPKQPLLRAKPLFRLRNLLH----NRK-------LEDSESHELE--EYFDDLPPE 969
+ +++ QPLL N L NRK E+++ + E E L PE
Sbjct: 1185 NLTIQNTAQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPE 1244
Query: 970 LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAE 1018
LC + F + + LP I++R+ LL+A +++ +S+ G +
Sbjct: 1245 LC--TVHPFPASLWRTAVCLPCILYRINGLLLADDIRKQVSSDLALGRQ 1291
Score = 48.9 bits (115), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L+GH ++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+
Sbjct: 1713 LVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYMTYENVHEGKLS 1771
Query: 1278 DLRSMLVNN 1286
LRS V N
Sbjct: 1772 HLRSKQVAN 1780
Score = 47.0 bits (110), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 1001 VAIELKHLLSASFPEGAEVSAEM-----LLKALT-TEKCQERFS--LERLEILGDAFLKY 1052
+EL+HLLS A + + LL+A+T R + +RLE LGDA L Y
Sbjct: 1987 ATVELEHLLSGFEEFEASLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDY 2046
Query: 1053 AVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ RHL+ G LT RS VNN+ LA R+ Y R
Sbjct: 2047 LITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFR 2091
>gi|301106324|ref|XP_002902245.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
gi|262098865|gb|EEY56917.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
Length = 2680
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 238/553 (43%), Gaps = 99/553 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+EL A+ EN IVYL TGCGKT +A+ ++ E+ HL P K + +F PT LV
Sbjct: 199 RRYQVELTISALLENTIVYLPTGCGKTLVAIKVLDEMKHL--NPNK-LVVFFVPTGPLVS 255
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID-QYEVLVMIPQILLYCLYHRFIKME 178
QQA I F+V+ G R + +D + L + PQ L L++ K+
Sbjct: 256 QQAAYIRRESDFRVKEMSGQHGRTGAATSDPITVDGDVDALAVTPQYFLNLLFNDRTKIT 315
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPV-----VGKGASAQ 233
++++FDE HHA NHPY +++K D+ P I +TASP G +A
Sbjct: 316 DYSVMVFDEAHHA--TGNHPYCELLKKLATIDLRTRPHILALTASPFGEGVRETSGQTAL 373
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
NL ++ N++ N A + ED E SF+ + +VT E
Sbjct: 374 NNLARAFNAVVN---APTIAAEDLE--ASFIPK---------------EAQWVTVQESEH 413
Query: 294 EIK-RE---QYISA---LSRKLHDHQ--------------------SLRNTTKQLNRLHD 326
E K RE +YI + L R+L + Q LR +Q ++
Sbjct: 414 ERKLREGIKRYIESFYTLIRRLMNGQVIPFEGNYDTDDMELSQFLAKLRILREQAEKMAR 473
Query: 327 SMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
K + GV S LS E + L++ + S + + A R
Sbjct: 474 GPKADTDTTGV----EKSKRSLSDLELIFQHLLK-----VASSFYNLSIHGAGTVAEALR 524
Query: 387 RDGIASDLSCIE--------VLKEPFFSKKLL-RLIGI-LSTF-------RLQQHMKCI- 428
R I SDL E VL EP + ++ L+ L TF R+ +CI
Sbjct: 525 R--IFSDLEAAESKKGKRAFVLVEPAYRAIMIPALVNFPLETFTGTDISNRVHLVAECIR 582
Query: 429 -----------VFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSIL 477
VFV R TA L+ ++ L L VG N+ + L
Sbjct: 583 RANFDHNSRAIVFVRRRKTAILLAKAMEALDVLRELNPTRFVGHNSYEGMSWEEEQRPTL 642
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
++FR G + LLVAT V EEGLD+ C LVI+FD V S IQSRGRAR S +
Sbjct: 643 DRFRQGRIRLLVATNVLEEGLDVPECSLVIQFDGVIGVTSLIQSRGRARHRDSSFIIFCS 702
Query: 538 S-GNQRELDLIKN 549
+ G +R L++N
Sbjct: 703 AVGKERNQRLVEN 715
>gi|89114026|gb|ABD61604.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 179/381 (46%), Gaps = 85/381 (22%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1665 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1724
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1725 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1784
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1785 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1842
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1843 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1902
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1903 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 1962
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDY+IT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1963 TPNRLTDCYQRLEFLGDAVLDYIITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2022
Query: 1297 SFYKFLIFDSNVLSETINNYV 1317
F+KF S L++ I+ +V
Sbjct: 2023 GFHKFFRHLSPGLNDVIDRFV 2043
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 439 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 495
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 496 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 555
Query: 535 LV 536
LV
Sbjct: 556 LV 557
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 759 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 818
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 819 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 878
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 879 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 935
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 936 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 992
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 993 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1044
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1045 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1098
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1099 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1158
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1159 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1216
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1217 IRKQVSADLGLGRQ 1230
Score = 48.9 bits (115), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYL 1259
+ + LP S D L+GH ++LQA + N G +RLE +GD+ L Y
Sbjct: 1642 TSAILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GINLERLETIGDSFLKYA 1698
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1699 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1742
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1919 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 1976
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 1977 LGDAVLDYIITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2029
>gi|255970532|gb|ACU45742.1| dicer-like protein 1, partial [Sporothrix schenckii]
Length = 1021
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 225/929 (24%), Positives = 363/929 (39%), Gaps = 168/929 (18%)
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVNAGLKSMSRNAMKS---ILE 478
Q +CIVFV + TA L+ + Q + + + R LVG G K M +N ++ +
Sbjct: 158 QKTRCIVFVEQRYTATLLADLFQQEQMKIPNLRTGVLVG--GGSKDMGKNTFRTQLLTIS 215
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KF+ G++N L AT + EEGLDI L T+ +IQSRGRAR +S Y + +
Sbjct: 216 KFKRGQVNCLFATSIAEEGLDIPGLQPCHPLRLYGTMIQYIQSRGRARHQESTYIHMAEL 275
Query: 539 GNQRELDLIKNFSKEEDRM---------NREIM-DRTSSDAFTCSE--ERIYKVDSSGAC 586
GN L+ E++M NR++ + D F E +++Y V S+ A
Sbjct: 276 GNVDHRRLLAENKASENKMRDFCNALPENRKLEGNDNDMDYFLRDETDQQVYVVPSTQAK 335
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSS 646
++ + +L +Y S LP PKP++ F G +C ++LP+++PI Q G P S
Sbjct: 336 LTYRSSLVILAQYVSTLPEPSEGVPKPEYSVFCTADGFVCEVVLPSSSPIRQATGRPHSR 395
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE--GSRGELH 704
+ AK A L++ ++ +L P +F+S + +
Sbjct: 396 KQVAKCAAAFAMCLKLYEKKYIDKHLHP-----------IFASRLPAMRNARLAVSSKKQ 444
Query: 705 EMLVPAVLRQSWTKSQYPVRLNFYFMQFI-PDPADRIYREFGLFVKSLLPGEAEHLKVDL 763
V ++W+ P +L + P+ DR R + +P E L
Sbjct: 445 AQYTMRVKPETWSVLGMPTQLYASILSLTQPESLDRPSRPLVFLSRHKMPLLPE---FPL 501
Query: 764 HLARGRSVMTKLVPSGIMQAQQFQEM----------FLKVILDRSEFNSEFVPLGKDDYC 813
++GR+ + VP I E+ F V E S+ +P Y
Sbjct: 502 FFSKGRASKVRCVPVDIPMQPTPNELEALAAYTLRAFYDVFSKEYEGTSKDMPYFIAPYS 561
Query: 814 ESSSSTFYLLLP----VIFHKNSVDWKIIR----------------------RCLSSPVF 847
E T ++LP ++ +DW I + +S P
Sbjct: 562 E---PTHDVVLPDKSTCPDARSILDWTSIHHVAAQIERITCQGDEPDSFFENKFVSDPFD 618
Query: 848 GTPG---GSVDR-----KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFE 899
G+ V R +P P H W+ V N L Y+ W
Sbjct: 619 GSRKFYLRQVRRDMSALDPVPEGAPAPKHRAWNRPDTVRNILNYSV-SLW---------- 667
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL 959
S S V+ I Q ++ A +++ RNLL R
Sbjct: 668 -----------SKSRVNTPIRQ--------DQVVVEADIVYQRRNLLDERV--------- 699
Query: 960 EEYFDDLPPELC-----QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHL--LSAS 1012
+ DD P C L+I D + + LP I+HR+E+ L+A+E + L +
Sbjct: 700 --FLDDFGPSRCFIVLDTLRISPIPVDSIAMIFNLPPIIHRIESTLIALEAAAVIGLPSI 757
Query: 1013 FP----EGAEVSAEMLLKALTTE-----KCQERFSLERLEILGDAFLKYAVGRHLFLLHD 1063
+P E ++ A TE + + ERLE+LGD+FLK A L+ L
Sbjct: 758 YPGLALEACTKDCDVSDDAGATETAINFQAGMGRNYERLELLGDSFLKMASTIALYTLAP 817
Query: 1064 TVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETER 1123
+E E R + N NL A L+ YIR + FD + + ++ ++ +
Sbjct: 818 DKNEFEYHVERMCMICNKNLFNNALEIGLEEYIRSKEFDRAWYPPVVDETVKLAAEAAAK 877
Query: 1124 TIHSQYDGRAPDDLNAEVRCSKG-------HHWLHKKTIADVVEALVGA----------- 1165
T +G+ P L+ + KG +H L K+IADV EA++GA
Sbjct: 878 TGTPDENGKTPTALHGLI-LKKGRKQQEGSYHALSDKSIADVCEAMIGAAYLTTYEERDF 936
Query: 1166 --FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQ 1222
+ A + F + F A + I+ + +A + MA + +G+
Sbjct: 937 DLAVQAVSVVAKSKFHPMRTYKEYFAAYVLPEWQIAPAT----AAQVHMAKAVARDVGYT 992
Query: 1223 FLHRGLLLQAFVHPSFNRLG---GCYQRL 1248
F + LL A +HPS+ R+ YQRL
Sbjct: 993 FTYPRLLRCAVMHPSYPRVYEQLPSYQRL 1021
>gi|347440705|emb|CCD33626.1| hypothetical protein [Botryotinia fuckeliana]
Length = 984
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 220/915 (24%), Positives = 368/915 (40%), Gaps = 148/915 (16%)
Query: 535 LVDSGNQRELDLIKNFSKEEDRM---------NREIM-DRTSSDAFTCSEE--RIYKVDS 582
+V+S N+ ++ IK K E + +R++ + + D F E RIY V +
Sbjct: 1 MVESHNEEQIRTIKEVLKHEKMLKLFASALPEDRKLTGNNFNMDYFLRKERGHRIYPVPN 60
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGT 642
S A ++ +++L + LP + + IC ILP API +G
Sbjct: 61 SDAKLTYRMSLTVLSAFVDSLPRAPESVLRVDYVVTTVDKQFICEAILPEEAPIRGAIGR 120
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ-EDNATEDEPMLFSSDSDSYEGEGSRG 701
P ++ + AK A + LH+ G +NDYLL + +A L + D G +
Sbjct: 121 PATTKQVAKCSAAFETCVILHQKGYINDYLLSTFKRSAHMMRNALLAVD-------GKKQ 173
Query: 702 ELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI----PDPADRIYREFGLFVKSLLPGEAE 757
E ++M L S K ++M + PD DR + GL +S LP E
Sbjct: 174 EAYDMQTKPTLWSSKGKQ------GIFYMTVLSLKSPDNLDRASQPLGLLTRSPLPDLPE 227
Query: 758 HLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSS 817
+ LH GR+ T VP + ++ + F F K D
Sbjct: 228 FV---LHFGAGRNSPTSCVPLASSITLEKNKLDQVNMFTLCLFQDVFSKAYKSD----PD 280
Query: 818 STFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESD- 876
S Y L+P+ VDWK + +S + T D ++ + P + H W + D
Sbjct: 281 SMPYFLVPINCLNAIVDWKS-QNPMSIIDWETVEYVQDFENKQADKPWE-HKPWLGKPDD 338
Query: 877 -VENSLVY----ATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHL-ISSYGIHLK--- 927
++ + + K W +T + P + ++ I Y L
Sbjct: 339 YFKDKFITDPFDGSRKLWSVGITKEYRPLDPVPPNTAPRKGARKNNSNIMEYSCSLWAKA 398
Query: 928 ------HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKD 981
+QP++ A + RNLL + + E ++ F L P LK+
Sbjct: 399 RAKRTFDEEQPVIEATYISLRRNLLD--EFDGGELETSKKCFIILEP----LKVSPLPTT 452
Query: 982 IGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE--------KC 1033
+ + LLP+I+HR+E+ L+A+E LL ++ ++ L+A+T + +
Sbjct: 453 VVAMAYLLPAIIHRVESYLIALEATDLLHL------DIRPDLALEAVTKDSDNSGEHGEE 506
Query: 1034 QERF------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
Q F + ERLE LGD FLK L+ L+ DE R + N NL A
Sbjct: 507 QTNFQRGMGNNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHVDRMCLICNKNLFNTA 566
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
+ L YIR F+ ++ G P+ L + +
Sbjct: 567 LKLELYKYIRSAAFNRRAWYPEG-----------------------PELLRGKTATAPNT 603
Query: 1148 HWLHKKTIADVVEALVGAFI--------DDSGFKAATAFLK--------WIGIQVEFEAS 1191
H L K++ADV EA++GA + D+ +A T + W +E
Sbjct: 604 HKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNSDNHNAVVWSDYYKLYEKP 663
Query: 1192 QVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQR 1247
+ ++ A +DMA +E+ + F H LL AF+HP++ + CYQR
Sbjct: 664 KWQTATATA-------AQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFIYEQIPCYQR 716
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGD++LD ++L+ +P P LT+ + +V+NQ + V F+K L+ +
Sbjct: 717 LEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLGFHKHLLTLDS 776
Query: 1308 VLSETINNY---VDYMITPSSTREVKEGP--------------RCPKVLGDLVESSLGAI 1350
+ + I +Y ++ + + T + G + PK L D+VE+ +GAI
Sbjct: 777 QVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLPDIVEAFIGAI 836
Query: 1351 LLDSGFNLNTVWKIM 1365
+DS ++ V K
Sbjct: 837 FVDSEYDYGEVEKFF 851
>gi|221361581|emb|CAX18339.1| dicel-like 4 [Nicotiana benthamiana]
Length = 118
Score = 161 bits (408), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/119 (63%), Positives = 88/119 (73%), Gaps = 1/119 (0%)
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
Q YIRDQ F P F+A+GR CP IC+K+TE +IH Q G D EVRCSK H WL K
Sbjct: 1 QAYIRDQSFYPNNFYAVGRPCPEICNKQTENSIHGQC-GNVTDGAKTEVRCSKCHQWLRK 59
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD 1211
KTIAD+VEALVGAF+ DSGFKAA AFLKWIGI +FE SQV +IC +SK F+PL+ +D
Sbjct: 60 KTIADIVEALVGAFVVDSGFKAAIAFLKWIGIYTDFEESQVKSICAASKIFIPLADEID 118
>gi|293335075|ref|NP_001167848.1| uncharacterized protein LOC100381550 [Zea mays]
gi|223944409|gb|ACN26288.1| unknown [Zea mays]
Length = 264
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 139/262 (53%), Gaps = 44/262 (16%)
Query: 1378 LQLNPIRELLELC--NSYDLDLQFPSLKKGGKF--LAEAKVTGKDKDVFISACATNLSRK 1433
+ ++P+REL E C N +DL L P+ K G+F E + GK IS A N + K
Sbjct: 1 MHIDPMRELRETCQYNGFDLGLPEPT-KYNGEFHVKVEVNINGK----MISCTAANRNSK 55
Query: 1434 EAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV---------- 1483
+A ++A+Q+ SKLK GY K KSLE IL+S+ K E+ LIGYDE PINV
Sbjct: 56 DARKVAAQETLSKLKNYGYKHKRKSLEEILRSTTKKESELIGYDEEPINVEDDIDMQMNN 115
Query: 1484 -----------VAADDNVFEKLKISEPQGGSS-------------CDIGSPSLTTGGLQN 1519
A DN +K + + S D + G +
Sbjct: 116 LLINGERTSIQSTAGDNKVDKNDANSGRNNKSNVVMQNGCLPRGATDKINQKEYHGDMVR 175
Query: 1520 RSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPE-KIIECIGEPQAK 1578
++ARS LYELCAAN WKPP F+ C +EG SHL+ FT +V++EI ++EC +P+ +
Sbjct: 176 KTARSFLYELCAANYWKPPEFELCNDEGPSHLRKFTCKVLIEITGTSVSLLECYSDPKLQ 235
Query: 1579 KKGAAEHAAEGMLWCLEREGYL 1600
K+ A EHAAEG LW L+ GYL
Sbjct: 236 KRAAQEHAAEGALWYLKHLGYL 257
>gi|443922458|gb|ELU41905.1| dicer-like protein 1 [Rhizoctonia solani AG-1 IA]
Length = 1426
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 227/907 (25%), Positives = 371/907 (40%), Gaps = 144/907 (15%)
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM 685
C I + P +I G P A+ AC +A L LG L P T +
Sbjct: 528 CTIRTNSCDPPLEIHGEPSLCKALARSSACFRACFTLFNLGLLPSSFFPSRPLHTWKHGI 587
Query: 686 LFSSDS----DSYEGEGSRGELHEMLVPAVLRQSWTKS--QYPVRLNF-YFMQFIPDPAD 738
L + D+Y P VL W P +L + Y +QF
Sbjct: 588 LQPPKNRVAIDTY-------------YPPVLPLFWHNCLLAAPSKLFYPYLIQFSMGSQT 634
Query: 739 RIYREFGLFVK---------SLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEM 789
+Y L ++ S+ P + E LKV L S++T+ V E+
Sbjct: 635 GLYPSMILLIRIPLGDIKEFSVFPNQTE-LKVSLSQCAPLSLITEQV-----------EL 682
Query: 790 FLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGT 849
+ L+ LG Y S Y +LPV F N +I R P
Sbjct: 683 AFRYTLNLWRI------LGNKQYDSPSGELAYFVLPVKFGPNFEPTRIARTTSIEPCIS- 735
Query: 850 PGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEK--NGYSPYK 907
V+ PL+ +N D+ N ++ ++ N K N S
Sbjct: 736 -WQEVNDLVSFRVRPLKCNNVDEMWLDLMNGVIQDRSNEFTRRFENAKLRKDLNPLSLIM 794
Query: 908 DSDSSSHVDHLISSYGIH------LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEE 961
L+ Y H +++ +QPL+ A L L N L + + +++
Sbjct: 795 QDKPGEPQISLLDYYRTHRHEFEGIQNLQQPLIEATLLPGLANQL------NPQEPTVQK 848
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
+ L PE+C + I + SLLPS++ +EN+L+A E+ + +F +G ++
Sbjct: 849 TTNYLVPEICYVSSI--PAPTFRTASLLPSVIWHIENVLIAKEV----NLTFFQG-QIQD 901
Query: 1022 EMLLKALTTEKCQERFSLERLEILG------------------DAFLKYAVGRHLFLLHD 1063
E++ AL + FS ERLE LG D F+KYA +L+ +
Sbjct: 902 ELVAHALCSRMAHRTFSYERLEFLGRHHIVPHMFDSMRLIYAGDTFIKYAASAYLYGVEP 961
Query: 1064 TVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI-CSKETE 1122
T G L +R VNN +L A L I+ F P Q+ P + SK++
Sbjct: 962 TAPSGVLHSKRQKMVNNRSLWLGAQALGLPPCIQSDVFRPKQWV-----IPNVLISKKS- 1015
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGH-HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKW 1181
IH + G A++ S+ + + KTIADVVEA++GA + G + A + K
Sbjct: 1016 -PIHGENPGFTG---QAQLLNSRQYSRQIPPKTIADVVEAMIGAALLSGGEELAFSVAKT 1071
Query: 1182 IGIQVEFEASQVTNICISSKSFLPLSAS----LDMATLEILLGHQFLHRGLLLQAFV--- 1234
+G + I + + + S + L ++G + LLLQA V
Sbjct: 1072 LGFDTLKTCDWLDVISYAPNKSMTMKESDHKGETLDGLIKIIGVSLDNPELLLQAMVRIF 1131
Query: 1235 ---------------HPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
H S R Y+RLEFLGDAVLD L+ +S + P +T +
Sbjct: 1132 LSIIKLEVQLRTVQQHASMARSSESYERLEFLGDAVLDMLVVQSFFSDEEEWSPHSMTLI 1191
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-----ITPSSTREVKEGPR 1334
+S +V+N+A A + ++ +++L+ D N L+++I ++D + I + + +K +
Sbjct: 1192 KSSMVSNRALAIICIESGLHQYLMHDINSLAQSIVTFIDEVQKCKQIARTDAQRLKYWSK 1251
Query: 1335 --CPKVLGDLVESSLGAILLDSGFNLN---TVW-KIMLSFLDPILKFSNLQLNPIRELLE 1388
PK LGD+VES LGAI + SGF++ TV+ +++ F D + + +P+ L++
Sbjct: 1252 LVAPKALGDVVESLLGAIYISSGFSITRVKTVYDRVLKPFYDRYIDKKAMLTHPMSRLMK 1311
Query: 1389 L-----CNSYDLDLQFPSLKKGGK-FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQ 1442
C S+ + L GG F E K+ G+ I A A + ++AI+ A+++
Sbjct: 1312 RLESIGCRSFGVAKAETQLPNGGTGFKCEVKIHGQ-----IIAQAASEKAQQAIKDATER 1366
Query: 1443 LFSKLKA 1449
+ L A
Sbjct: 1367 ALNLLDA 1373
>gi|336260369|ref|XP_003344980.1| hypothetical protein SMAC_06757 [Sordaria macrospora k-hell]
gi|380095053|emb|CCC07555.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1365
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 226/513 (44%), Gaps = 66/513 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + ++ +NIIV + TG GKT +AVL I A + + K I FL PTVAL
Sbjct: 66 ARAYQLEMFEASLRQNIIVAMDTGSGKTQVAVLRI---ARELEQSDKRIW-FLVPTVALA 121
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ +V++ I K CG G W+ + ++V QIL H F+
Sbjct: 122 HQQHQVLQSQIPSVKTLLICGHDGVDSWSDQAVWDAILLNVRIVVSTYQILSDANAHGFV 181
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASA 232
+++ ++L++ DE H+ +HP +++M + Y P + VP I G+TASP++
Sbjct: 182 RLDSLSLIVIDEAHNCS--KSHPISRMMTEAYLPAKRAGLPVPSILGLTASPLM------ 233
Query: 233 QANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYG--------PVINDTSS 283
+N I LE +LDA + + E+L V+ P + V+ YG P D
Sbjct: 234 -SNNLDDIEKLEQVLDAVCRTPTKHREELLEHVNRPEMLVFPYGDSGGPVTEPAPTDLMI 292
Query: 284 SYVTCSEQLAEIKREQYISAL--SRKLHDHQSLRN-TTKQLNRLHDSMKFCLENLGV--- 337
+ L +I+++ + L R Q LR+ TK+ MK + N +
Sbjct: 293 RFREAYHGL-DIRKDPEVLLLKAQRTERARQKLRHAVTKKDTTAQKEMK-GVYNRSILVH 350
Query: 338 --CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLS 395
G A Y L M EL + R+ +A +
Sbjct: 351 KEVGPWAADYYLTRAISQMLAELEHEHSDHF-----RYIGEA-------------LRSIP 392
Query: 396 CIEVLKEPF-FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-W 453
V KEP S K+ L+ ILS+ Q+ IVFV V +++I+ +
Sbjct: 393 IPTVSKEPIQLSSKVQTLLRILSSH--QEDPVGIVFVQERVMVSIVTHIISTHPLTKDRY 450
Query: 454 RCHFLVGV------NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
R ++G K M+ LE FR G NLLVAT V EEG+D+ C LVI
Sbjct: 451 RTAAMIGTANVPGRKQHFKDMTNAGDNKSLEGFREGRFNLLVATNVLEEGIDVPICNLVI 510
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
FD P + SFIQ RGRAR S +V +
Sbjct: 511 CFDKPSNIKSFIQRRGRARKGSSTLYLMVQDAS 543
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 133/323 (41%), Gaps = 67/323 (20%)
Query: 963 FDDLPPELCQLKII--GFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
DD P Q+ + F++ + SL + +M+ N L +EL +LL
Sbjct: 781 MDDFPAAFAQVGAVMPAFTRAVEMSL-VAADLMY---NRLGCLELDNLL----------- 825
Query: 1021 AEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
++ ALT+ + + ERLE LGD LK+ L E L++ + + VNN
Sbjct: 826 --LVTTALTSIGSRAPTNYERLEFLGDTILKFCACLTASALFPNHHERLLSQWKDSLVNN 883
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
L + + L YI A + P+ + D ++P +AE
Sbjct: 884 VRLCRASIDFGLDEYI-------IHSMASKKWRPKFVENYLD-------DSKSPK--SAE 927
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFI---DDSGFKAATAFL---------KW--IGIQV 1186
R + K +ADV+E+L+GA D S A L KW IG+
Sbjct: 928 TRE------MSSKMVADVIESLIGATYMCGDMSKALECIALLLPTSKSSKFKWQDIGLSR 981
Query: 1187 EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---G 1243
+ N + K PL E +G+ F + LL++A HPS LG
Sbjct: 982 DKLFELAPNDAVLHKQLEPL---------EKAMGYAFTKKSLLIEAMTHPSCPGLGDNDS 1032
Query: 1244 CYQRLEFLGDAVLDYLITSYLYS 1266
CY+RLEFLGDA+LD ++ L +
Sbjct: 1033 CYERLEFLGDAILDVIVVKRLMA 1055
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
+R Y+RLEFLGD +L + +++P L+ + LVNN ++D
Sbjct: 836 SRAPTNYERLEFLGDTILKFCACLTASALFPNHHERLLSQWKDSLVNNVRLCRASIDFGL 895
Query: 1299 YKFLIF---DSNVLSETINNYVDYMITPSS--TREVKEGPRCPKVLGDLVESSLGAILL 1352
+++I + + NY+D +P S TRE+ K++ D++ES +GA +
Sbjct: 896 DEYIIHSMASKKWRPKFVENYLDDSKSPKSAETREMSS-----KMVADVIESLIGATYM 949
>gi|403418950|emb|CCM05650.1| predicted protein [Fibroporia radiculosa]
Length = 1373
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 225/510 (44%), Gaps = 64/510 (12%)
Query: 926 LKHPKQPLLR---AKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDI 982
LK+ KQPLL A P N + L+ S++ +Y L PELC I S
Sbjct: 785 LKNEKQPLLEVAVAPPAINYLNPVLRPLLQSSKAPP--KY---LIPELCAKFTIPAS--T 837
Query: 983 GSSLSLLPSIMHRLENLLVAIELK-HLLSASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
++ L+PSI+HR+++ L+ EL H + E E L+ ALT F ER
Sbjct: 838 FRTMLLVPSILHRIDHQLLVKELNAHFFQHTILE------EHLIAALTPPSASVAFDYER 891
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE+ GDAFLKY + F+ V EG L R ++N LL A R L YI+ +PF
Sbjct: 892 LELFGDAFLKYVASIYCFVTTPHVREGALHMARQKIISNKALLTGANRIGLPPYIQSKPF 951
Query: 1102 DPCQFFALGRRCPRICSKETER-TIHSQ----YDGRAPDDLNAEVRCSKGH--------- 1147
+ + I S + R I+ Q Y+ D +A SK
Sbjct: 952 -------VAKTWTPITSPHSSRDPINDQKAVHYNDAVAGDTSAIQTTSKRSKKQKQQDEQ 1004
Query: 1148 --HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVTNICISSKSF 1203
WL KT+ADVVEA++GA G + A +K + + + + S + + S S
Sbjct: 1005 NIQWLGDKTVADVVEAIIGAAYLSGGQRIALQTMKVLSVNIPGVEQWSDFSRLFTSQTS- 1063
Query: 1204 LPLSASLDMAT---LEILLGHQFLHRGLLLQAFVHPSFNRLGG-CYQRLEFLGDAVLDYL 1259
P + L AT +E ++G+ F LL QA H S Y RLEF+GDAVLD+L
Sbjct: 1064 -PSTVPLPTATVRAVETIVGNVFARPQLLAQALTHTSIGAHDDRTYDRLEFVGDAVLDFL 1122
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-- 1317
+ ++Y P L P LT L+S +V+N A A V + L + + + YV
Sbjct: 1123 VVQFIYDRNPGLSPNGLTLLKSAMVSNHALAAFCVHSGLHIHLRHAAPEVGTAVQVYVRK 1182
Query: 1318 -------DYMITPSSTREVKE---GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
+Y + S R + PK L D+VES +GA+ + F +V
Sbjct: 1183 LGEVREKEYRLAQSERRLPGQYWLALDPPKTLSDVVESVIGALYISDDFQETSVRAFFDG 1242
Query: 1368 FLDPI----LKFSNLQLNPIRELLELCNSY 1393
+ P ++ +L +P L EL S+
Sbjct: 1243 TIKPFYEYHIRLQSLCPHPTTTLFELLQSF 1272
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 28/305 (9%)
Query: 394 LSCIEVLKEPF-FSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
+ C++V + F S K L+L+ ++ T + +V V R + A S I++ L+ LA
Sbjct: 224 IPCLDVASDDFNVSPKFLKLVELIETNTSPTNSFRVLVLVKRKIVA---SMIVELLRELA 280
Query: 452 SWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
++ V A ++ + + +KF G+ N+L+ TK E + C +VIRFDL
Sbjct: 281 AFNRVRNVRPEAMTQAQYMD-QELTFDKFVRGDTNILLITKSSEH-MTFPKCDIVIRFDL 338
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR------------ 559
E+ S+ S +V+ GN ++ + + D R
Sbjct: 339 FESQLSYAASVAHCSNSDGYLVHMVERGNAGHRRVLADITALSDDFQRWLPRLKPGSTGA 398
Query: 560 -------EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF-FNP 611
E +D SD+ + + ++G + ++++HR + L D F
Sbjct: 399 IPPRSLHETLDPYWSDSDDDEPSPLIRDPTTGGIVKCSDAITVIHRLAASLQDDHNGFTI 458
Query: 612 KPKFYYFDDLGGTICHII-LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
+P F + G I LP + I I G P+ + + AC A L G L+
Sbjct: 459 EPFFQCAETREGMRTFTISLPQPSSIRPITGPPRKFPPDSLQAACYLACSKLLDEGMLDY 518
Query: 671 YLLPQ 675
+ PQ
Sbjct: 519 RMFPQ 523
>gi|58382645|ref|XP_312076.2| AGAP002836-PA [Anopheles gambiae str. PEST]
gi|55241936|gb|EAA07793.2| AGAP002836-PA [Anopheles gambiae str. PEST]
Length = 2256
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 157/330 (47%), Gaps = 87/330 (26%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------EFEASQVTN 1195
H + K++AD VEAL+GA++ + G + A F+ W+GI+V + +T
Sbjct: 1862 QHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNETALTP 1921
Query: 1196 ICISSKSFLPLSASLDMAT----------------------------------------- 1214
+ ++ PLS + +A
Sbjct: 1922 YKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLLQGFEE 1981
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
E LG++F R LLQA H S+ NRL CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 1982 FEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHS 2041
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMIT---- 1322
PG LTDLRS LVNN FA++AV F+K+ + S L E I+ +V + IT
Sbjct: 2042 PGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEY 2101
Query: 1323 --PSSTREVKE-------GP------------RCPKVLGDLVESSLGAILLDSGFNLNTV 1361
P E+ E GP PK LGD+ ES GAI LDS +L+TV
Sbjct: 2102 YLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTV 2161
Query: 1362 WKIMLSFLDP-ILKF-SNLQLNPIRELLEL 1389
WK+ + P I KF S++ +PIRELLE+
Sbjct: 2162 WKVYRKMMGPEIEKFSSSVPKSPIRELLEM 2191
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D V EG+L+ RS V+
Sbjct: 1663 SPAIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1722
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L + F+P
Sbjct: 1723 NLNLYRLGRRKRLGDCMIAAKFEP 1746
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 68/213 (31%)
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
++ + +L++FR E NLL+ T V EEG+++ C LVIR++ P S+ Q +GRA+
Sbjct: 594 TIEHRKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAK 653
Query: 527 MPQSEYAFLVDSGN-------QRELDLIKNFSKE-------EDRMNREIMD-------RT 565
P + + V N Q ++ I++ S + +D RE +D T
Sbjct: 654 APGAYHVLFVTPENAASRNEQQEDMASIEDVSLDGMIPEGPKDDNTRETIDDQDRRMIET 713
Query: 566 SSDAFT-----------------------------------CSEERIYKVDSSGA----- 585
++DA C E +Y+ S GA
Sbjct: 714 ATDAMIEQVAIYREVEKLLLAKCRNGEPPDWELKHADCFNHCLE--VYRPSSGGAVALQS 771
Query: 586 ---CIS--AGYGVSLLHRYCSKLPHDEFFNPKP 613
C S G + L++YC+KLP D F P
Sbjct: 772 NGTCASLWLGNAIQTLNKYCAKLPSDTFTKLTP 804
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V+N
Sbjct: 1665 AIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723
Score = 44.3 bits (103), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA R+ Y
Sbjct: 2015 QRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYF 2071
>gi|347968645|ref|XP_003436256.1| AGAP002836-PB [Anopheles gambiae str. PEST]
gi|333467908|gb|EGK96757.1| AGAP002836-PB [Anopheles gambiae str. PEST]
Length = 2336
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 157/330 (47%), Gaps = 87/330 (26%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------EFEASQVTN 1195
H + K++AD VEAL+GA++ + G + A F+ W+GI+V + +T
Sbjct: 1942 QHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNETALTP 2001
Query: 1196 ICISSKSFLPLSASLDMAT----------------------------------------- 1214
+ ++ PLS + +A
Sbjct: 2002 YKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLLQGFEE 2061
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
E LG++F R LLQA H S+ NRL CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 2062 FEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHS 2121
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMIT---- 1322
PG LTDLRS LVNN FA++AV F+K+ + S L E I+ +V + IT
Sbjct: 2122 PGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEY 2181
Query: 1323 --PSSTREVKE-------GP------------RCPKVLGDLVESSLGAILLDSGFNLNTV 1361
P E+ E GP PK LGD+ ES GAI LDS +L+TV
Sbjct: 2182 YLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTV 2241
Query: 1362 WKIMLSFLDP-ILKF-SNLQLNPIRELLEL 1389
WK+ + P I KF S++ +PIRELLE+
Sbjct: 2242 WKVYRKMMGPEIEKFSSSVPKSPIRELLEM 2271
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 148/697 (21%), Positives = 263/697 (37%), Gaps = 166/697 (23%)
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
++ + +L++FR E NLL+ T V EEG+++ C LVIR++ P S+ Q +GRA+
Sbjct: 594 TIEHRKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAK 653
Query: 527 MPQSEYAFLVDSGN-------QRELDLIKNFSKE-------EDRMNREIMD-------RT 565
P + + V N Q ++ I++ S + +D RE +D T
Sbjct: 654 APGAYHVLFVTPENAASRNEQQEDMASIEDVSLDGMIPEGPKDDNTRETIDDQDRRMIET 713
Query: 566 SSDAFT-----------------------------------CSEERIYKVDSSGA----- 585
++DA C E +Y+ S GA
Sbjct: 714 ATDAMIEQVAIYREVEKLLLAKCRNGEPPDWELKHADCFNHCLE--VYRPSSGGAVALQS 771
Query: 586 ---CIS--AGYGVSLLHRYCSKLPHDEFFNPKP------------KFYYFDDLGGTICHI 628
C S G + L++YC+KLP D F P K Y + I
Sbjct: 772 NGTCASLWLGNAIQTLNKYCAKLPSDTFTKLTPIWRCATTVRKGRKLYQYT--------I 823
Query: 629 ILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA-------- 679
LP N+P + I+G P + A++ A LH G L++ P A
Sbjct: 824 RLPINSPWKEDILGLPMPTETLARRLAAYMTCRMLHAAGELDNSFQPFGKEAFRAFEADW 883
Query: 680 -----TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFI- 733
E + + S +SD G R + + + +V + ++ L M+ I
Sbjct: 884 ENFELEESDAKILSENSDPRPGTTKRRQYYYKRIASVFNECRPDAETVAYLYHIRMELIC 943
Query: 734 PDPAD------RIY------REFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMT 773
P P + +IY + FG+ L+P + +KV L L R ++
Sbjct: 944 PIPEEQNTRGRKIYAPEESAQGFGILTTKLIPKISSFPIFTRSGEVKVSLDLCPQRVKLS 1003
Query: 774 K--------LVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLP 825
V + + Q+ + + +E VP K ++ P
Sbjct: 1004 AHQLEMVNCFVKYTFTKVLRLQKSLMLYDANATENCFFIVPTVKQAVAGAAGKD---EPP 1060
Query: 826 VIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSE-SDVENSLVYA 884
+ VDW+ + + ++ +S P+ P + G++ + +++V
Sbjct: 1061 LQSDDVMVDWEFVEKIATNV----------HRSGPTFIPDEARKGYTFDVGKFRDAVVMP 1110
Query: 885 THK-----KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPL 939
++ ++FY V I + S + S+ ++ ++ Y IH+++ +QPLL
Sbjct: 1111 WYRNRDQPQYFY-VAEICNHLSPKSTFPGSNYATFEEYYHRKYKIHIQNQRQPLLDVDHT 1169
Query: 940 FRLRNLLH----NRK-------LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSL 986
N L NRK E+++ + E E L PELC I F + +
Sbjct: 1170 SARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELC--TIHPFPASLWRAA 1227
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LP +++R+ LL+A E++ ++ G E E+
Sbjct: 1228 VCLPCVLYRINALLLADEIRRQVARDLRLGWENVDEL 1264
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D V EG+L+ RS V+
Sbjct: 1743 SPAIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1802
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L + F+P
Sbjct: 1803 NLNLYRLGRRKRLGDCMIAAKFEP 1826
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V+N
Sbjct: 1745 AIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1803
Score = 44.3 bits (103), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA R+ Y
Sbjct: 2095 QRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYF 2151
>gi|29424049|gb|AAO73809.1| dicer-1 [Anopheles gambiae]
Length = 2259
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 157/330 (47%), Gaps = 87/330 (26%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------EFEASQVTN 1195
H + K++AD VEAL+GA++ + G + A F+ W+GI+V + +T
Sbjct: 1865 QHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNETALTP 1924
Query: 1196 ICISSKSFLPLSASLDMAT----------------------------------------- 1214
+ ++ PLS + +A
Sbjct: 1925 YKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLLQGFEE 1984
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
E LG++F R LLQA H S+ NRL CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 1985 FEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHS 2044
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMIT---- 1322
PG LTDLRS LVNN FA++AV F+K+ + S L E I+ +V + IT
Sbjct: 2045 PGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEY 2104
Query: 1323 --PSSTREVKE-------GP------------RCPKVLGDLVESSLGAILLDSGFNLNTV 1361
P E+ E GP PK LGD+ ES GAI LDS +L+TV
Sbjct: 2105 YLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTV 2164
Query: 1362 WKIMLSFLDP-ILKF-SNLQLNPIRELLEL 1389
WK+ + P I KF S++ +PIRELLE+
Sbjct: 2165 WKVYRKMMGPEIEKFSSSVPKSPIRELLEM 2194
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D V EG+L+ RS V+
Sbjct: 1663 SPAIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1722
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L + F+P
Sbjct: 1723 NLNLYRLGRRKRLGDCMIAAKFEP 1746
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 68/213 (31%)
Query: 467 SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 526
++ + +L++FR E NLL+ T V EEG+++ C LVIR++ P S+ Q +GRA+
Sbjct: 594 TIEHRKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAK 653
Query: 527 MPQSEYAFLVDSGN-------QRELDLIKNFSKE-------EDRMNREIMD-------RT 565
P + + V N Q ++ I++ S + +D RE +D T
Sbjct: 654 APGAYHVLFVTPENAASRNEQQEDMASIEDVSLDGMIPEGPKDDNTRETIDDQDRRMIET 713
Query: 566 SSDAFT-----------------------------------CSEERIYKVDSSGA----- 585
++DA C E +Y+ S GA
Sbjct: 714 ATDAMIEQVAIYREVEKLLLAKCRNGEPPDWELKHADCFNHCLE--VYRPSSGGAVALQS 771
Query: 586 ---CIS--AGYGVSLLHRYCSKLPHDEFFNPKP 613
C S G + L++YC+KLP D F P
Sbjct: 772 NGTCASLWLGNAIQTLNKYCAKLPSDTFTKLTP 804
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V+N
Sbjct: 1665 AIILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 1723
Score = 43.9 bits (102), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA R+ Y
Sbjct: 2018 QRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYF 2074
>gi|115478498|ref|NP_001062844.1| Os09g0315100 [Oryza sativa Japonica Group]
gi|113631077|dbj|BAF24758.1| Os09g0315100, partial [Oryza sativa Japonica Group]
Length = 245
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 19/245 (7%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L
Sbjct: 18 ILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAAL 77
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
+LA +NL YI + F+P R C ER + + AP+ + ++ +
Sbjct: 78 CQLACSSNLVGYIHAEEFNP-------RDWIIPCLDYDERG-NKKISFLAPNGMYSQRKM 129
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF 1203
S + K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K
Sbjct: 130 S-----IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKIS 180
Query: 1204 LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLIT 1261
+ +D+ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T
Sbjct: 181 MKAEEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFT 240
Query: 1262 SYLYS 1266
Y YS
Sbjct: 241 EYYYS 245
>gi|158706450|sp|A2QX45.2|DCL22_ASPNC RecName: Full=Dicer-like protein 2-2; Includes: RecName:
Full=Endoribonuclease dcl2-2; Includes: RecName:
Full=ATP-dependent helicase dcl2-2
Length = 1362
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 181/688 (26%), Positives = 312/688 (45%), Gaps = 85/688 (12%)
Query: 35 VSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY 94
S + A+S+ G T + + R+YQLE+ ++++ N+IV + TG GKT +A+L I
Sbjct: 2 TSSTDYHADSTPG---TTSNMELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVAILRI- 57
Query: 95 ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID 154
LA + + L PTVAL +QQ I + G++ W+ +
Sbjct: 58 -LADIDKGNSDKFVWLLCPTVALSEQQY------IQYATVFLPSGAE---DKAIWDNALS 107
Query: 155 QYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV 214
++ V Q+L L H F+K+ ++LLIFDE HH K +H KIM+ Y
Sbjct: 108 GIKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHC--KKDHVANKIMQVHYH------ 159
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSP---VVR 270
+ S NLPK + + + + + S+E E +L S +P +
Sbjct: 160 ------------KQHQSGVQNLPKILGLTASPILSDLSSLEIVESNLGSICKTPRQYYAQ 207
Query: 271 VYQYG--PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSM 328
+ Q+ P+I +Y + + E+ LS + S + +KQL + M
Sbjct: 208 LLQFTNRPLILPRLPTYTIPNCSVKAPILEKLCGILSSEDEVPSSSKMKSKQLKHIRRFM 267
Query: 329 KFCL---ENLGVCGAL-HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
+ + LG+ A + ++ E+MR + AE I + FA + I
Sbjct: 268 QTSESINQELGIWAATEYMRKSIMHFKESMR---MGAEKTNISNYGKDFAME-------I 317
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL 444
R G D C ++ S L+ LS ++ +VFV + T AL +++
Sbjct: 318 LTRLGKLQD--CSPAIQPEEISPMCQCLLDELSK-AYREGFCGLVFVTQRATVLALKWLI 374
Query: 445 QNLKFLAS-WRCHFLVGVNAGLKSMS--------RNAMKSILEKFRSGELNLLVATKVGE 495
+N + + C +G++ S + RN ++ LEKFR G LNL++ T E
Sbjct: 375 ENHPLTSHLFTCGTFIGMSTTQYSKTELGNLHDIRNQTET-LEKFRQGSLNLIITTDALE 433
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV--DSG----NQRELDLIKN 549
EG+D+ C V+ F+ ++ SFIQ RGRAR S++ ++ +SG + E++ I+
Sbjct: 434 EGIDVPACNTVLNFNCQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEIEL 493
Query: 550 FSKEEDRMNREI-MDRTSSDAFTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKLPH 605
K ++ R+I + D + ERI +D +GA + V L+ +CSKLP
Sbjct: 494 VQKLQNAERRQIPANELDFDKY----ERISLSLDIDRTGAQLIMREAVGYLYNFCSKLPA 549
Query: 606 DEFFNPKPKFYYFDDLGGTICHII-LPAN---APIHQIVGTPQSSMEAAKKDACLKAIED 661
+ + KP F Y + G ++ LP+N + S ++ A++DA L+A +
Sbjct: 550 QLYVSNKPLFTYERNNYGRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKA 609
Query: 662 LHKLGALNDYLLPQEDNATEDEPMLFSS 689
L++ G +NDYL+P + + + ++F S
Sbjct: 610 LYQAGLVNDYLVPTQVSDHLEGDIIFRS 637
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 179/439 (40%), Gaps = 80/439 (18%)
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
+ D LP Q+ + PSI H +E ++A L+ LS +
Sbjct: 861 FVDKLPSMFAQVAL------------FTPSISHEVEVYMIAQILRQELSLRSVTPWQ-RI 907
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L A+ + R + L +GDAF+KY LFL H EG L+ + ++++
Sbjct: 908 DLLAIAIRPTSIEHRATFRLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDA 967
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRR-CPRICSKETERTIHSQYDGRAPDDLNAE 1140
L ++ L ++ + + G+R P + S G P A
Sbjct: 968 GLAHAIHQSGLGKFLISKHLN-------GKRWVPPLVS------------GIEPASNEAR 1008
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE-FEASQVTNICIS 1199
R + T+AD+ +A+VGA D G A A + +++ + AS + + S
Sbjct: 1009 QRS------IGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDGTYS 1062
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL--GGCYQRLEFLGDAVLD 1257
AS + +E LLG+ F + L +++ HPS L Y+RL FLG +VL+
Sbjct: 1063 KTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1122
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV------DQS-------------- 1297
+++ SYL+ + P ++ L+S NN +A+ +Q+
Sbjct: 1123 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1182
Query: 1298 ------FYKFLIFDSNVLSETINNYVDYMITPSST--REVKEGPRCP----------KVL 1339
+ FL S+ LS ++++V + E+ E P +VL
Sbjct: 1183 TTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALGDMRVL 1242
Query: 1340 GDLVESSLGAILLDSGFNL 1358
D+++S GA+ +DS L
Sbjct: 1243 SDIIQSIFGAVFIDSQATL 1261
>gi|80979119|gb|ABB54762.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 245/1052 (23%), Positives = 429/1052 (40%), Gaps = 152/1052 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F D K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCADKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLP--------------------QEDNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
LP AE + LH+ + K+V Q + + V D + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPL-KVVIQSSEQLELLHQFHGMVFRDLLKIWQPFFV 815
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSH 862
L + S YL++P+I + +DW ++ + P SV RK +
Sbjct: 816 LDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQTAP 868
Query: 863 GPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHL 918
P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 869 RP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYEFT 918
Query: 919 ISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 919 MSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC--F 974
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 975 NYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 205/475 (43%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTELKNALKSISHEEEKNDPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L +F+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|80979131|gb|ABB54768.1| Dicer-2 [Drosophila santomea]
Length = 1719
Score = 157 bits (397), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 245/1052 (23%), Positives = 427/1052 (40%), Gaps = 152/1052 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGEQGVDXWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ QS R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQSQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNANFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYXVKQXFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPXX 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + I P S++AAK A KA + L+
Sbjct: 591 NSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKDTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLPQE--------------------DNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
LP AE + LH+ + K+V Q + + V D + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPL-KVVIQSSEQLELLHQFHGMVFRDLLKIWQPFFV 815
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSH 862
L + S YL++P+I + +DW ++ + P SV RK +
Sbjct: 816 LDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAENSSVHQRKQQTAP 868
Query: 863 GPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHL 918
P D E +V YA + LVT + E S ++ ++ +
Sbjct: 869 XP----------EDFEGKIVSQWYANFEHKRMLVTKVHRELTPLSLMEQNHQDKTYYEFT 918
Query: 919 ISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 919 MSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKSRAKII--LIPELC--F 974
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 975 NYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKXISTILFTPRYTWLPPSISLPHNVLALWRENPXLAGMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D + EV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNSFVEGCRANAQTHHAGADFSTEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM----- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1321 --------------ITP---------------------SSTREVKEGPR----------C 1335
+ P S E P+
Sbjct: 1546 RVTNHVRILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNYPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ F+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELQEFTRNVPINAIRQLTE 1659
>gi|188593364|emb|CAO78751.1| Oikopleura cytoplasmic RNAse III enzyme Dicer [Oikopleura dioica]
Length = 1814
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 147/274 (53%), Gaps = 50/274 (18%)
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
+L K+IAD +EAL+GA++ +G +A FL ++G+ I + S + L+
Sbjct: 1493 QYLTDKSIADCMEALIGAYLKATGIEATQQFLCYMGL-----------IVLPSSALDKLT 1541
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
+ E +G+ F ++G LLQ+ H S+ N++ CYQRLEFLGDAVLD+LIT +L+
Sbjct: 1542 RT--YGEFEKKIGYTFKNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLDFLITRHLF 1599
Query: 1266 SVYP--KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITP 1323
+P + PG+LTDLR+ LVNN FA +AV F+K+L + L I +YV Y
Sbjct: 1600 D-HPTKRFSPGELTDLRAALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRDYVLY---- 1654
Query: 1324 SSTREVKEGPRC--------------------------PKVLGDLVESSLGAILLDSGFN 1357
TR+ EG PKVLGD+ ES GAI LDSG N
Sbjct: 1655 CQTRQDVEGMEAVLKRIRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVAGAIYLDSGMN 1714
Query: 1358 LNTVWKIMLSFLDP-ILKFS-NLQLNPIRELLEL 1389
L+ VW + L I K+S N +PIRELLEL
Sbjct: 1715 LDAVWGVYRPMLQKYIDKYSINPPRSPIRELLEL 1748
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 139/629 (22%), Positives = 239/629 (37%), Gaps = 116/629 (18%)
Query: 470 RNAMKSILEKFRSGELNLLVATKVGE----EGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+ + L KFR+ E N+L+A E DI C LV+RFD P S+++ G
Sbjct: 467 KKKQEEALHKFRTREANILIAQAETENEAHRHFDIPKCNLVVRFDAP---GSYLRYDGGK 523
Query: 526 RMPQSE----YAFLVDSGNQREL-DLIKNFSKEEDRM-NREIMDRTSSDAFTCSE----- 574
R+ + Y L++ + + +++ F E+ + NR + + A C +
Sbjct: 524 RLLSQQNDALYGILINKKEKIQFCRMLEEFKMLEEYLKNRASLAEEAGPAELCLDLDVTH 583
Query: 575 -----ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHI 628
+ Y + +GA I++ Y S+LP D F G +
Sbjct: 584 LFEDMPKDYHNNENGALINSIY---------SRLPCDSFTQLSVLRKTLQLANGKFQTSL 634
Query: 629 ILPANAPIHQIV-GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLF 687
+LP N+ + I+ + + AK+ A L+A L LG L+D+L +++ E + F
Sbjct: 635 VLPNNSHLRGILLAIQKKPLNCAKRSAALEACTKLRILGELDDFLF---NSSKEMDKYKF 691
Query: 688 SSD------------SDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--------------Y 721
D EG R + + +P LR S+ Y
Sbjct: 692 EIDPFPNPLSRKRKPPPGMEGGPKRRQKYPRHIPRSLRAKPKDSKAEGASALPVPEKECY 751
Query: 722 PVRLNFYFMQFIPDPADRIYREFGL-----FVKSLLPGEAEHLKVDLHLARGRSVMTKLV 776
R++ ++ + D + YR L F KS A + H G S+ +
Sbjct: 752 VYRISMFYRHGLADKYN--YRGRKLHRPEDFSKSFAIISALPIP---HTISGFSIFDRSG 806
Query: 777 PSG-----IMQAQQFQEMFLKVILDRSEFNSEFV-----PLGKDDYCESSSSTFYLLLPV 826
G I Q F L++I ++ + V P G + S YL+ PV
Sbjct: 807 EEGVNLEPIHQQVCFSATQLEIIKSFHQYIIQDVIRIERPGGVVQFNPDKSPVPYLIAPV 866
Query: 827 IFHKN---SVDWKIIRRCLSSPVFGTPGGSVDRK--SLPSHGPLQLHNGWSSESDVENSL 881
+DW + ++ V +R+ + P H +S+ E+S+
Sbjct: 867 DCDNGIEWEIDWDYLTESIAGRVLAKEAAEAERRVNTYSEDDPFIFH-----KSEYEDSV 921
Query: 882 VYATHKKW-------FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLL 934
V ++++ FY V I ++ + SP+ D S + + + + L + KQPLL
Sbjct: 922 VICSYRRHDAPTQNRFY-VAEIQYDMDPDSPFPADDYESFRQYYMQRWALCLTNEKQPLL 980
Query: 935 RAKPLFRLRNLL-------HNRKLEDSESHELEEYFDD------LPPELCQLKIIGFSKD 981
NLL R L S + + ++D L PE+ L + S
Sbjct: 981 DVDHTDCRLNLLTPRFVTQKGRALPASALEKKRQKYEDKANRQYLIPEI--LDVHPVSAS 1038
Query: 982 IGSSLSLLPSIMHRLENLLVAIELKHLLS 1010
+ LPSI+HR+ LL A +L+ +S
Sbjct: 1039 LWRKAVCLPSILHRITCLLAAEDLRRRIS 1067
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 1015 EGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
E + + +L+ LT K + F+LERLE+LGD FLKY+V +L+ ++ EG+L+ R
Sbjct: 1285 ENVGPTPDQILQTLTLSKSSDGFNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFR 1344
Query: 1075 SNAVNNSNLLKLAARNNL 1092
S V+N NL +L N++
Sbjct: 1345 SKKVSNRNLFRLGVYNDI 1362
Score = 41.2 bits (95), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 1242 GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKF 1301
G +RLE LGD L Y +T YLY Y GQL+ RS V+N+ + V
Sbjct: 1306 GFNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKKVSNRNLFRLGVYNDIPGR 1365
Query: 1302 LIFDSNVLSETINNYV 1317
++ + + ++T N++
Sbjct: 1366 MVAEQFMQNDTGGNWL 1381
>gi|444841769|gb|AGE12617.1| Dicer 2 [Nilaparvata lugens]
Length = 1448
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 178/756 (23%), Positives = 331/756 (43%), Gaps = 86/756 (11%)
Query: 319 KQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQAS 378
K+L + +K+ +ENLG GA A+ ++ E + + LC +
Sbjct: 184 KKLANMIVDIKYQMENLGAYGAYKAALAMMILLERKKRSAQLRKHAAAFQYLCTMLTLVR 243
Query: 379 EV-FAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTA 437
++ F + + +G + F S K+L+L+ + F+ + K ++FV R +
Sbjct: 244 KISFDVLSKYEGEERIIR--------FVSNKVLKLLELFKGFK--ETDKALIFVTRRFSC 293
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAM------KSILEKFRSGELNLLVAT 491
+ L YIL++LK L + + F+VG N + +R + K +L++F G+ N+L+A+
Sbjct: 294 KCLQYILEDLK-LPNVKSDFIVGYNTNPFNDTREGLLEKKVNKKVLKRFNGGDTNVLIAS 352
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS 551
V EEG+D+QTC VI+FD P T+ S+IQS+GRAR QS++ + ++ + + I F
Sbjct: 353 DVLEEGIDVQTCNTVIKFDPPTTMRSYIQSKGRARTRQSKFYIMTEAKDYKVEGKINKFE 412
Query: 552 KEEDRMNREIMDR-----------TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYC 600
+ E ++ E++ + ++ F + + Y + G I ++L++RYC
Sbjct: 413 RLETKLKHELVGKFLERSLPSEKELANSIFKTTIKPFYPLGPDGPKIEGSTPIALINRYC 472
Query: 601 SKLPHDEFFNPKPKFYY--------FDDLGGTICHIILPANAPIHQIVGTPQ-SSMEAAK 651
L D F P F++ F++ + ++ LP ++P+ ++ + ++E AK
Sbjct: 473 MSLDCDRFSTLTP-FWWKEVSKKNGFNE-NNIVVYLQLPISSPVRDVIKSDAFPNVELAK 530
Query: 652 KDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM-LFSSDSDSYEGEGSRGELHEMLV-- 708
+ A LKA + L+ L+D +LP+ + + E LF D E + + LV
Sbjct: 531 RSAALKACKLLYDSRELDDKMLPRGKTSQQLEDRGLFPCWRD--EAPPTESDDSAALVRV 588
Query: 709 -PAVLRQSWT-----KSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVD 762
P V RQ+ KS Y + + P P +++Y + K
Sbjct: 589 GPVVKRQTLVGTKKCKSIYNKKFPECMCECRPMPGEKVYMHIIKMKPVYSEPKGNRKKAF 648
Query: 763 LHLARGRS----VMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSS 818
L + S + TK P + + MF N F + + S
Sbjct: 649 FELLKSDSEFAILTTKKWPMTSLIIMKLTHMFELCFQPFELINLAFYLIVFRLFINRLQS 708
Query: 819 TFYL-LLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDV 877
F+ +L ++ ++W +IR P +P +K + +E
Sbjct: 709 FFFTNVLENENGRSVINWSVIRDNQEFPEIISPPVEERQKDI-----------VVTEEIY 757
Query: 878 ENSLVYATHKKWF----YLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGI--HLKHPKQ 931
+NS+V ++ + Y+VT++ + S + D ++ + ++ Y L ++
Sbjct: 758 KNSVVIPWYRGFLPRQAYIVTDLSKNETALSDFPSGDYPTYEKYFVTKYANVEKLYSAQK 817
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSES----HELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
PLL + L R N L R + S + EE+ + L PELC + + + + +
Sbjct: 818 PLLEVRALSRRLNCLRPRHSVQATSKRKKKQEEEFEESLVPELCVRCAVPAAYWLKA--T 875
Query: 988 LLPSIMHRLENLLVAIELK-------HLLSASFPEG 1016
LLPS +HR+ LL+A EL+ +L + + P G
Sbjct: 876 LLPSCVHRITALLLADELRVTIATDLNLSTVTLPPG 911
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 160/352 (45%), Gaps = 56/352 (15%)
Query: 1015 EGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
E V L+ LT + F+LERLE LGD+FLKYAV LF+ + EG+LT +
Sbjct: 1029 EAPGVELADFLQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIK 1088
Query: 1075 SNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKET------ERTIHSQ 1128
+ N NL + L I+ F+ + P C T E I+ +
Sbjct: 1089 GKVIGNRNLFYCGEQKGLGSIIKAVEFNTESDWI----APGFCVDRTVQNLFRELNINPR 1144
Query: 1129 YDGRAPDDLNAEVRCSK-------------------------------GHHWLHKKTIAD 1157
Y P + E+ C K + KT++D
Sbjct: 1145 YLYEIPLSRD-EIECGKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVISNKTVSD 1203
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL----SASLDMA 1213
VEAL+G +I G + L+W+ + + +T + K P +D
Sbjct: 1204 SVEALLGLYIQSYGLEKGFDMLRWLKV---IDPKLITPDVYTKKKVEPTILFKGGQIDFH 1260
Query: 1214 T-----LEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
LE L+ ++F +R LLQA HP++ N + YQRLEFLGDA+LD+L+T+++Y
Sbjct: 1261 IHHPDYLEKLINYKFKNRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHMYE 1320
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
L PG+LTDLRS LVNN A++AV +KFL+ S LS+ I +V+
Sbjct: 1321 YCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVE 1372
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIFLAPT 114
+AR YQ EL A++ N I+YL TG GKT +A ++I I K FL T
Sbjct: 27 VARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMIIKHFGADIEKKLSEGGKRAFFLVNT 86
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIP 163
V LV+QQA+ I+ F V + G ++ CD Q E++ P
Sbjct: 87 VQLVEQQAQSIKRQTTFTVGEYTG-----QTGCDLYSTDPQQEMVAFSP 130
Score = 48.9 bits (115), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 28/176 (15%)
Query: 940 FRLRNLLHNRKLEDS---------ESHELEEYFDDLPPELCQLKIIG---FSKDIGSSLS 987
F + ++ N+ + DS +S+ LE+ FD L LK+I + D+ +
Sbjct: 1190 FISQQVISNKTVSDSVEALLGLYIQSYGLEKGFD----MLRWLKVIDPKLITPDVYTKKK 1245
Query: 988 LLPSIMHRLENLLVAIE----LKHLLSASFPEGAEVSAEMLLKALTTEKCQERF---SLE 1040
+ P+I+ + + I L+ L++ F A LL+AL+ Q + +
Sbjct: 1246 VEPTILFKGGQIDFHIHHPDYLEKLINYKFKNRA-----FLLQALSHPTYQPNNITPTYQ 1300
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
RLE LGDA L + V H++ D + GELT RS VNN L +A R L ++
Sbjct: 1301 RLEFLGDAILDFLVTTHMYEYCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFL 1356
>gi|80979129|gb|ABB54767.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 243/1052 (23%), Positives = 429/1052 (40%), Gaps = 152/1052 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQXVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLP--------------------QEDNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEMLV-PAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ + P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
LP AE + LH+ + K+V Q + + V D + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPL-KVVIQSSEQLELLHQFHGMVFRDXLKIWQPFFV 815
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSH 862
L + S YL++P+I + +DW ++ + P SV RK +
Sbjct: 816 LDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQTAP 868
Query: 863 GPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHL 918
P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 869 RP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYEFT 918
Query: 919 ISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 919 MSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC--F 974
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 975 NYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAXMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNXFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|80979117|gb|ABB54761.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 244/1054 (23%), Positives = 432/1054 (40%), Gaps = 156/1054 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L++ + R + + + + + R D +V
Sbjct: 291 SIAIISLIAEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLP--------------------QEDNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEF 804
LP AE + LH+ + ++ S + QF M + +L + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPLKVVIQSSEQLELLHQFHGMVFRDLL---KIWQPF 813
Query: 805 VPLGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLP 860
L + S YL++P+I + +DW ++ + P SV RK
Sbjct: 814 FVLDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQT 866
Query: 861 SHGPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVD 916
+ P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 867 APRP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYE 916
Query: 917 HLISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 917 FTMSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC- 973
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 974 -FNYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|195487840|ref|XP_002092062.1| Dcr-2 [Drosophila yakuba]
gi|194178163|gb|EDW91774.1| Dcr-2 [Drosophila yakuba]
Length = 1730
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 244/1054 (23%), Positives = 431/1054 (40%), Gaps = 156/1054 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 13 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 72
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 73 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 132
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 133 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 187
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 188 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 241
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 242 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 301
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 302 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 361
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 362 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 421
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 422 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 481
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 482 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 541
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 542 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 601
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 602 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 661
Query: 664 KLGALNDYLLP--------------------QEDNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 662 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 721
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 722 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 767
Query: 751 LLPGEAE----HLKVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEF 804
LP AE + LH+ + ++ S + QF M + +L + F
Sbjct: 768 KLPRLAEMPLFSNQGKLHVRVANEPLKVVIQSSEQLELLHQFHGMVFRDLL---KIWQPF 824
Query: 805 VPLGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLP 860
L + S YL++P+I + +DW ++ + P SV RK
Sbjct: 825 FVLDR-----RSKENSYLVVPLILDADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQT 877
Query: 861 SHGPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVD 916
+ P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 878 APRP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYE 927
Query: 917 HLISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 928 FTMSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC- 984
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 985 -FNYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1017
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1202 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1261
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1262 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1321
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1322 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1381
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1382 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1438
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1439 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1496
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1497 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1556
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1557 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDV 1616
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1617 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1670
>gi|80979127|gb|ABB54766.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 244/1052 (23%), Positives = 429/1052 (40%), Gaps = 152/1052 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLPQE--------------------DNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
LP AE + LH+ + K+V Q + + V D + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPL-KVVIQSSEQLELLHQFHGMVFRDLLKIWQPFFV 815
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSH 862
L + S YL++P+I + +DW ++ + P SV RK +
Sbjct: 816 LDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQTAP 868
Query: 863 GPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHL 918
P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 869 RP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYEFT 918
Query: 919 ISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 919 MSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC--F 974
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 975 NYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E E P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNEPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|443728415|gb|ELU14771.1| hypothetical protein CAPTEDRAFT_209996 [Capitella teleta]
Length = 985
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 238/527 (45%), Gaps = 70/527 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL + +N ++ TGCGKT +A +I + H+++ P + IFL PTVALV
Sbjct: 293 RSYQLELVNGVGDVKNSLIVAPTGCGKTFVAAEIIKQ--HMVKNPNSKV-IFLVPTVALV 349
Query: 119 QQQAKVIEE-SI-GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQQ V++ SI +++ G ++ + I ++ ++VM PQIL+ H +
Sbjct: 350 QQQHDVLQSYSIPDARIKPISGEGSQINP---LKNLIQRHNIMVMTPQILVNACDHASLL 406
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKV-PRIFGMTASPVVGKGASAQ 233
I LLIFDECHH+ HPY+KIM ++ KP K+ PRI GMTAS VGK +
Sbjct: 407 SFGIGLLIFDECHHSM--KEHPYSKIMALYHDLKPLEGKMPPRIVGMTASVGVGKAKNED 464
Query: 234 ANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSP---------------VVRVYQYGPV 277
+ I L N +DA + SV D EDL V+ P V +++
Sbjct: 465 DAIKHIIRLLAN-MDAHLVSVVDCKEDLAFCVNKPQENLVYLKKRNSDPFYVCIHEIMVT 523
Query: 278 INDTSSSY-VTCSEQLAEIKREQYI-------SALSRKLHDHQSLRNTTKQLNR-LHDSM 328
I + +Y ++ A + +++ I S L ++ H + R N H +
Sbjct: 524 IENRIENYNKDLTKAQARLGKQEQIKPPAEKGSLLYKQWHSAFAKRLIVNVENESFHFDL 583
Query: 329 KFCLENLGV----------CGALHASYILLSGDETM-----RNELIEAEGNTIDDSLCRF 373
C E L + C +L A L + + RN +++ I L +
Sbjct: 584 VCCAEYLKIYNDALLINSDCRSLDALEYLKEKVKHLLEMRNRNRDQDSDRIHIKQWLAKL 643
Query: 374 ASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNR 433
+ E C A+ +E LK+ KK R ++ M+C+VF
Sbjct: 644 YTDKVEDLERFCDDPNNAN--PKLETLKKYILKKK-----------REEEPMRCMVFCQT 690
Query: 434 IVTARALSYILQNLKFLASWRCHFLVGVNAGL--KSMSRNAMKSILEKFRSGELNLLVAT 491
+L + L R FL G NA K ++ + +++ F +G L+ AT
Sbjct: 691 REICSSLVRWANSTDGLVDLRATFLTGSNAAADKKGLTSSQQNDVIKSFANGRHQLIFAT 750
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
V EEGLDIQ C VIR+ ++ + IQSRGRAR ++ + L S
Sbjct: 751 TVAEEGLDIQACDNVIRYQYVTSMTARIQSRGRARKSEASFTLLATS 797
>gi|161783812|sp|Q7SCC1.3|DCL2_NEUCR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl-2; Includes: RecName:
Full=ATP-dependent helicase dcl-2
gi|18376024|emb|CAB91758.2| related to RNA helicase/RNAseIII CAF [Neurospora crassa]
Length = 1540
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 182/669 (27%), Positives = 291/669 (43%), Gaps = 100/669 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + ++++NIIV L + ++ H + I FL PTVAL
Sbjct: 71 ARAYQLEMFEASLKQNIIVALFSD--------RVMVADGHWQWQDSGRIW-FLTPTVALA 121
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ +V++ I K CG G W+ + ++V QIL H F+
Sbjct: 122 RQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSFV 181
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASA 232
+++ ++L++ DE H+ +HP A++M + Y P + VP I G+TASP+
Sbjct: 182 RLDSLSLIVIDEAHNC--SGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPL------- 232
Query: 233 QANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYG-----PVINDTSSSYV 286
++N I LE +LDA + E+L + V+ P + V YG P D + ++
Sbjct: 233 KSNNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRFL 292
Query: 287 TCSEQLAEIKREQYISAL--SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV-----CG 339
+L +I ++ + L R + LR + + L + N + G
Sbjct: 293 EAYHRL-DISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYNRALLVRREIG 351
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
A Y L M EL E + R+ +A + +
Sbjct: 352 PWAADYYLTRTVSHMLAELERGEP----PAQHRYIGEA-------------LRSIPIPAI 394
Query: 400 LKEPF-FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCHF 457
KEP S K+ L+ +L++ QQ IVFV V +++I+ +R
Sbjct: 395 SKEPIQLSPKVQTLLKVLASH--QQDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTAS 452
Query: 458 LVGVNAGLKSMSRNAMK-------SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
++G A + +RN M + LE FR G NLLVAT V EEG+D+ C LVI FD
Sbjct: 453 MIGT-ASVPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFD 511
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD-------LIKNFSKEEDRMNR--EI 561
P + SFIQ RGRAR S +V + + L+K ++E R N E+
Sbjct: 512 EPSNIKSFIQRRGRAREVSSTLYLMVQNASSESATDWHNLERLMKERYEDEMRQNAELEL 571
Query: 562 MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK-------LPHDEFF----- 609
+D ++ + +V+S+GA ++ S L+ +C+K L + +F
Sbjct: 572 LDDPRIGSYP-----VLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYFVIRQV 626
Query: 610 NPKPKFYYFDDLGGTICHIILPAN-AP---IHQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
NP P L H LPA+ AP H+ + T +S + A DA +A + L+
Sbjct: 627 NPDPASPGRRTLLQATVH--LPASLAPDLRRHESLWT-WTSEKLAIMDASFQAYKALYNA 683
Query: 666 GALNDYLLP 674
G +N+ LLP
Sbjct: 684 GLVNENLLP 692
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH-----LLSASFPEGAEVSAEMLL 1025
Q+++ F +++P+ +E LVA +L + L + P ++
Sbjct: 932 TQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLP--------LIT 983
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYA---VGRHLFLLHDTVD---EGELTRRRSNAVN 1079
AL + + + ERLE +GD LK+ L H V E L++ + VN
Sbjct: 984 TALISSGSRGPTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVN 1043
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
N L + + L YI + SK+ Y ++A
Sbjct: 1044 NVRLCRASRDFGLDEYIINS----------------AASKKWRPKFVEDYMDEMKSPISA 1087
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA---TAFLKWIGIQVEFEASQVTNI 1196
E R + K +ADVVE+L+GA G A A L +F+ ++
Sbjct: 1088 ETRQ------MSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEIELS 1141
Query: 1197 CISSKSFLPLSASL--DMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFL 1251
F P A L + LE + + F + LL++A HPS LG CY+RLEFL
Sbjct: 1142 RTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERLEFL 1201
Query: 1252 GDAVLDYLITSYLYS 1266
GDA+LD ++ L +
Sbjct: 1202 GDAILDVIVVKRLMA 1216
Score = 42.7 bits (99), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 1245 YQRLEFLGDAVLDY---LITSYL---YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
Y+RLEF+GD +L + L S L +S+ P L+ + LVNN + D
Sbjct: 997 YERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGL 1056
Query: 1299 YKFLIFDS---NVLSETINNYVDYMITPSS--TREVKEGPRCPKVLGDLVESSLGAILLD 1353
+++I + + + +Y+D M +P S TR++ K++ D+VES +GA +
Sbjct: 1057 DEYIINSAASKKWRPKFVEDYMDEMKSPISAETRQMSS-----KMVADVVESLIGAAYMC 1111
Query: 1354 SGFN 1357
G +
Sbjct: 1112 GGMS 1115
>gi|80979123|gb|ABB54764.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 244/1052 (23%), Positives = 429/1052 (40%), Gaps = 152/1052 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGEQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLPQE--------------------DNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
LP AE + LH+ + K+V Q + + V D + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPL-KVVIQSSEQLELLHQFHGMVFRDLLKIWQPFFV 815
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSH 862
L + S YL++P+I + +DW ++ + P SV RK +
Sbjct: 816 LDR-----RSKENSYLVVPLILXADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQTAP 868
Query: 863 GPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHL 918
P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 869 RP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYEFT 918
Query: 919 ISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 919 MSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC--F 974
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 975 NYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGBFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|80979121|gb|ABB54763.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 244/1052 (23%), Positives = 429/1052 (40%), Gaps = 152/1052 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGEQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLPQE--------------------DNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
LP AE + LH+ + K+V Q + + V D + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPL-KVVIQSSEQLELLHQFHGMVFRDLLKIWQPFFV 815
Query: 807 LGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSH 862
L + S YL++P+I + +DW ++ + P SV RK +
Sbjct: 816 LDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQTAP 868
Query: 863 GPLQLHNGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHL 918
P D E +V YA ++ LVT + E S ++ ++ +
Sbjct: 869 RP----------EDFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNHQDKTYYEFT 918
Query: 919 ISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLK 974
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 919 MSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC--F 974
Query: 975 IIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 975 NYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|80979125|gb|ABB54765.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (389), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 239/1054 (22%), Positives = 431/1054 (40%), Gaps = 156/1054 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + + W EI ++VLV Q+ L +
Sbjct: 62 LARQQMVAVQRHTNLTVGFYVGXQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + K +PR+ G++ V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNKALPRVVGLSG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFLVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ + L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFATLDLMDIGVQPVRRSKSLQCQRDPQKKSSIKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDIXCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N+ + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNSISQDFESVLDRKYQKSAIQQFREGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKD 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + + I P S++AAK A KA + L+
Sbjct: 591 SSLQEDQRKILFGDCARSKEVVSIQLPLNSKLKNTIYSDPMDSVKAAKVSAAFKACKLLY 650
Query: 664 KLGALNDYLLP--------------------QEDNAT----EDEPML---FSSD--SDSY 694
+LG LN+ LP D+ T +D P + + +D ++ Y
Sbjct: 651 QLGELNERFLPITLKERVAAIADVHFEHWKKYGDDVTATVRKDAPKIVRNYKTDCPAEFY 710
Query: 695 EGEGSRGEL---HEM-LVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKS 750
+ GEL +E+ L P +T+ Y V L R R + + +++
Sbjct: 711 DARPRVGELCYAYEIFLEPQFESCDYTEHMY-VNL-------------RTPRNYAILMRN 756
Query: 751 LLPGEAEHL----KVDLHLARGRSVMTKLVPSG--IMQAQQFQEMFLKVILDRSEFNSEF 804
LP AE + LH+ + ++ S + QF M + +L + F
Sbjct: 757 KLPRLAEMPLFSNQGKLHVRVANEPLKVVIQSSEQLELLHQFHGMVFRDLL---KIWQPF 813
Query: 805 VPLGKDDYCESSSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSVDRKS--- 858
L + S YL++P+I + +DW ++ + P SV ++
Sbjct: 814 FVLDR-----RSKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAEHSSVHQRKQQT 866
Query: 859 --LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVD 916
P ++ + W + + + LV H++ L + E+N ++ +
Sbjct: 867 APRPEDFEGKIVSQWYANFEXKRMLVTKVHRE---LTPLSLMEQN-------HQDKTYYE 916
Query: 917 HLISSYGIHLK---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQ 972
+S YG H+ H + ++ + L +L + NR ++S + L PELC
Sbjct: 917 FTMSKYGNHIGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAKSKARAKII--LIPELC- 973
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
F D+ L LPSI+ R+ LL A L+
Sbjct: 974 -FNYEFPGDLWLKLIFLPSILRRMHFLLHAEALR 1006
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 203/475 (42%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + + +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSKETERTIH----- 1126
L + ++ I F P AL R P + +
Sbjct: 1251 LYCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHNLRDLALG 1310
Query: 1127 ---SQYDGRAPD---------------------DLNAEVRCSKGHHWLHKKTIADVVEAL 1162
S G D D +AEV G + K IAD +EAL
Sbjct: 1311 EEESMVSGHCSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY------ 1319
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1320 ----------------------------------MITPSSTREVKEGPR----------C 1335
+ + S E + P+
Sbjct: 1546 RVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK--FSNLQLNPIRELLE 1388
PK LGD++E+ + AI LD +L W+++ + P L+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEALIAAIYLDCR-DLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659
>gi|119190771|ref|XP_001245992.1| hypothetical protein CIMG_05433 [Coccidioides immitis RS]
Length = 1435
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 165/655 (25%), Positives = 291/655 (44%), Gaps = 99/655 (15%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + AR YQLE+ +++ +NIIV + TG GKT IA+L I R+ ++
Sbjct: 86 PPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ------RELER--------- 130
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
C K++ W+ + +++ PQ+LL L + F
Sbjct: 131 ----------------------CPAHKKI-----WDDILLNIRIVISTPQVLLDALSNGF 163
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKVPRIFGMTASPVVGKG 229
+ + I+LL+FDE HH + P +IM+DFY + +P I G+TASP
Sbjct: 164 VDLHTISLLVFDEAHHCV--RDAPANRIMRDFYHYHRQEEGTDGLPHILGLTASPTTRAR 221
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ L ++N++ + K++ E++ FV P R +Y P + + SS S
Sbjct: 222 QTDLEVLEINLNAV--CVTPKMHR----EEMMQFVHMPEYRSIEYQPDVQNFSSIVEKLS 275
Query: 290 EQLAE--IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC----GALHA 343
+ E I+ + ++ + R+ L++ + L+ L + CL+ L C +H
Sbjct: 276 VIINELDIENDPFVKFMRRR----NDLKSRQRLLDALENKKTPCLDQLKRCLRRSRVIHR 331
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV-LKE 402
+ + + ++ + + S ++A E + + + ++ +S E+ ++
Sbjct: 332 ELGPWASERFLTRCIMGLKSKQTNASGPQWADWDREDNSYML--NVLSQVVSSTEMGVQN 389
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKC---IVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
P +L R + L F + +H+ IVF L+ +L + +
Sbjct: 390 P--PDELSRKVHKLIDFLVLEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIKTTAFL 447
Query: 460 GVNAGLKSMSRNA----------MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
G +A S+SR + + ++ R+G+ +L++AT V EEG+D+ C LVI F
Sbjct: 448 GSSA---SVSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICF 504
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNREIMDRTS 566
DLP+ + SFIQ RGRAR S++A + D EL L++ K+ N+ ++
Sbjct: 505 DLPKDLRSFIQRRGRARKKGSKFALFLHSEDRATSSELHLMEKTMKQLYLENKRALEHIQ 564
Query: 567 SDAFTCSEERIY---KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY-FDDLG 622
EE Y +V S+GA ++ + L +C L EF P+F DD
Sbjct: 565 --YLENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTLSA-EFIATDPEFVLEGDDTT 621
Query: 623 GTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLLP 674
G +ILP+ + + + G E AK+DA +A L++ G +NDYL+P
Sbjct: 622 GFSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 98.2 bits (243), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 27/304 (8%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+P ++H +EN +A EL + P G + ++L A+++ +E + +RLE LGD
Sbjct: 942 FIPCLIHSIENYFIANELAQTIL--HPVGFS-NLSLVLTAISSSAAREASNYQRLEFLGD 998
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK L H EG LT R+ N V+N L A + L +I +PF ++
Sbjct: 999 SLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILTKPFTGAKW- 1057
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ + T H D+ R + K +ADVVEAL+GA
Sbjct: 1058 -----------RPSYNTDHINTG-----DMTEPTRE------MSTKVLADVVEALIGAAN 1095
Query: 1168 DDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
D G LK +++ ++ NI + + ++ +E L+G+ F +
Sbjct: 1096 IDGGENKILNCLKIFIPDIKWSPLNECVNILHHQEDSFSDENNNMLSEIEGLVGYTFKKK 1155
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
LLL A HPS G YQRLEF+GD++LD ++ L+ + +R+ LVN
Sbjct: 1156 PLLLAAVTHPSSKGSGHSYQRLEFVGDSILDIIVVQELFESPRCFHHFDMHLMRTALVNA 1215
Query: 1287 QAFA 1290
A
Sbjct: 1216 DFLA 1219
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F + L+L A + S R YQRLEFLGD++L + L + +P G+LT +
Sbjct: 969 FSNLSLVLTA-ISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGN 1027
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-VDYMITPSSTREVKEGPRCPKVLGD 1341
+V+N AN A+ KF++ ++ +Y D++ T T +E KVL D
Sbjct: 1028 IVSNGYLANAALQTGLDKFILTKPFTGAKWRPSYNTDHINTGDMTEPTRE--MSTKVLAD 1085
Query: 1342 LVESSLGAILLDSGFNLNTVWKIM--LSFLDPILKFSNLQ 1379
+VE+ +GA +D G N KI+ L P +K+S L
Sbjct: 1086 VVEALIGAANIDGGEN-----KILNCLKIFIPDIKWSPLN 1120
>gi|312376926|gb|EFR23879.1| hypothetical protein AND_11908 [Anopheles darlingi]
Length = 994
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 173/397 (43%), Gaps = 100/397 (25%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ--------------------- 1185
H + K++AD VEAL+GA++ + G + A F+ W+GI+
Sbjct: 600 QHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIRSNNGVPKAINTGNTQE 659
Query: 1186 -VEFEASQV------------TNICISSKSFLPLSASLDMATLEI------------LLG 1220
V++ V + + ++ +F L A E+ LG
Sbjct: 660 LVQYGRGTVDITEYGHWVAPPSPMVRANITFGGLEAGAHATARELNRLLEGFEVFERSLG 719
Query: 1221 HQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ F R LLQA H S+ NRL CYQRLEFLGDA+LDYLIT +LY + PG LTD
Sbjct: 720 YHFQDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGALTD 779
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV--------------------- 1317
LRS LVNN FA +AV F+++ + S L E I+ +V
Sbjct: 780 LRSALVNNTIFAALAVRHGFHRYFLHLSPGLQEVIDRFVRIQQENGHRITEEEYYLPDED 839
Query: 1318 DYMITPSSTREVK----------------EGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
D M+ E PK LGD+ ES GAI LDSG +LNTV
Sbjct: 840 DDMLAADGGFGGGFGEIEGGQALMGSGEAEDVEVPKALGDVFESIAGAIFLDSGMSLNTV 899
Query: 1362 WKIMLSFLDP-ILKF-SNLQLNPIRELLELCNSYDLDLQFPSLKKGGK--FLAEAKVTGK 1417
WK+ + P I KF S++ +PIRELLE+ P K GK LA+ +
Sbjct: 900 WKVYRKMMGPEIEKFSSSVPKSPIRELLEM---------EPETAKFGKPEKLADGRRVRV 950
Query: 1418 DKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGY 1452
+VF + R I A++ +LK GY
Sbjct: 951 TVEVFGKGTFRGIGRNYRIAKCTAAKCALRQLKKLGY 987
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L+ +D V EG+L+ RS V+
Sbjct: 376 SPAIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 435
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDP 1103
N NL +L R L + F+P
Sbjct: 436 NLNLYRLGRRKRLGDCMIAAKFEP 459
Score = 45.4 bits (106), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
++LQA + N G +RLE +GD+ L Y IT+YLY Y + G+L+ LRS V+N
Sbjct: 379 IILQALTMSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVSN 436
Score = 43.9 bits (102), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA R+ Y
Sbjct: 747 QRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALVNNTIFAALAVRHGFHRYF 803
>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1431
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 171/667 (25%), Positives = 298/667 (44%), Gaps = 83/667 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++ +N IV + TG GKT IAVL I E L R + + FL PTVAL +
Sbjct: 28 RAYQQEMLAESLRQNTIVAMETGSGKTQIAVLRIQE--ELSRCSPEKLVWFLTPTVALAE 85
Query: 120 QQAKVIEESIG-FKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ VI + I ++ R G + W++ + ++V PQ+LL + H F+K
Sbjct: 86 QQYAVISKQIPLYQSRLLLGSDNVDHWSTQHIWDEILLNIRIVVSTPQVLLDAMSHGFVK 145
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASAQ 233
+ ++LL+FDE H VK+N P+ IM+ ++ K ++P I G+TA+ A
Sbjct: 146 LSGLSLLVFDEAHRC-VKAN-PFNGIMRLYHHARKSGADELPAILGLTAT-------PAT 196
Query: 234 ANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSY----VTC 288
+++ LE+ L A + V E+L + P + V Y +++T+ V
Sbjct: 197 KATAEAVKILEDNLHAICRTPVVQREELLKYTHKPALLVVTYSRHLDETTKILKDLDVIL 256
Query: 289 SEQLAEIKREQYISALSRKLHDHQSL-----------RNTTKQLNRLHDSMKFCLENLGV 337
L +I+ + Y+ +L K D +S T K++ L + E LG
Sbjct: 257 DLTLIDIENDPYVKSLRAKKDDEKSKGILLKILDSGKTFTRKEILSLAQRTRVIDEELGP 316
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
A + G T + IEA D+++ R A +++ + LS +
Sbjct: 317 WAAE-----VFVG--TCAEKFIEASVKRSDNNIFRQWEDAEKIY--------MMRFLSML 361
Query: 398 EVLKEPF--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+ E S+K+ LI +++ + + IVFV + T L+++L
Sbjct: 362 PAIAENRVWGSSPDQISQKVEALITTIAS-KYNPGDRVIVFVEQRATVIMLAHLLSVHPL 420
Query: 450 LASWRCHFLVGVN--AGLKSM-----SRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
+ +G + A KS + + + +L + R G+ N+L+AT V EEG+D+
Sbjct: 421 TKEIVTKYFLGNSNYANRKSAITELSTLSDQRDVLAELRVGKTNILIATNVLEEGIDVPA 480
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN---- 558
C +VI FD P+ + SFIQ RGRAR S +D + D + ++ E ++
Sbjct: 481 CNMVICFDPPKDLRSFIQRRGRARDRLSRLVLFMDKNDD---DGLAKWAAMEHQLKEIYA 537
Query: 559 ---REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF 615
RE+ + + + I+K+ S+ A +S L +C+ + + +P++
Sbjct: 538 DNMRELEEIKALEDIEEESAEIFKIPSTEAVLSHQNAQPFLAHFCAT-GSSAYTSNQPEY 596
Query: 616 Y-----YFDDLGGTICHIILPANAPIHQIVGTPQSSME---AAKKDACLKAIEDLHKLGA 667
+ L ++LP+ V +S + AAK+DA +A L++ G
Sbjct: 597 IIDRQEFAPGLAQIAAKVVLPSYIDPSLRVAFSKSKWQTEKAAKRDAAFQAYVALYRAGM 656
Query: 668 LNDYLLP 674
++D L P
Sbjct: 657 VDDNLTP 663
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 45/307 (14%)
Query: 988 LLPSIMHRLENLLVAIELKH--LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+PSI H++E L +A L L F A V L A++ E +R E L
Sbjct: 931 FIPSITHKIEVLFIAERLARTVLSRVGFSNLAHV-----LTAISASSAHEENDYQRYEFL 985
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK HL + + EG L+ + V+N L + A L +I + F
Sbjct: 986 GDSLLKLITSIHLVVNNPLWHEGMLSAAKDTIVSNGRLYRTALNLGLDRFILTKSFT--- 1042
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
GR+ + SQ++ + L KT+ADVVE+L+GA
Sbjct: 1043 ----GRKW--------RPSYVSQFET-----------VGEEKRELSTKTLADVVESLLGA 1079
Query: 1166 FIDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEIL 1218
D G++ A K W I + + + P + +E +
Sbjct: 1080 AFLDGGYEKLEACAKIVLPERAWSSIGDDVRTLYEAALDSDQAAMHP-----KLGQMEEM 1134
Query: 1219 LGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
LG++F +L +A HPS N YQRLEFLGD++LD+ + ++ KL ++
Sbjct: 1135 LGYKFNKPSILFEALTHPSSNDGAPTYQRLEFLGDSLLDHFVVQEFFNHPEKLSHQEMHL 1194
Query: 1279 LRSMLVN 1285
+R+ +VN
Sbjct: 1195 MRTAVVN 1201
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQR EFLGD++L + + +L P G L+ + +V+N A++ +F++
Sbjct: 979 YQRYEFLGDSLLKLITSIHLVVNNPLWHEGMLSAAKDTIVSNGRLYRTALNLGLDRFILT 1038
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGF-NLNTV 1361
S + +YV S V E R K L D+VES LGA LD G+ L
Sbjct: 1039 KSFTGRKWRPSYV------SQFETVGEEKRELSTKTLADVVESLLGAAFLDGGYEKLEAC 1092
Query: 1362 WKIML 1366
KI+L
Sbjct: 1093 AKIVL 1097
>gi|80979133|gb|ABB54769.1| Dicer-2 [Drosophila teissieri]
Length = 1719
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 207/475 (43%), Gaps = 116/475 (24%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L A+T+ + F +ERLEILGD+FLK + +L + +EG LT+ +S V+N NL
Sbjct: 1191 FLAAITSSSTADVFDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKLVSNRNL 1250
Query: 1084 LKLAARNNLQVYIRDQPFDP------------CQFFALGRRCPRICSK------------ 1119
L + ++ I F P AL R P + S
Sbjct: 1251 LYCLSDTDIPKKISTILFTPRYTWLPPSISLPHNVLALWREKPELASMVGPHNLRDLALG 1310
Query: 1120 ETERTIHS-----QYDG------------RAPDDLNAEVRCSKGHHWLHKKTIADVVEAL 1162
E E + Y+ A D +AEV G + K IAD +EAL
Sbjct: 1311 EEESLVRGYCSDINYNSFVEGCRANAQSHHAGADFSAEVNFCVGLVTIADKVIADTLEAL 1370
Query: 1163 VGAFIDDSGFKAATAFLKWIGI-------------QVEFEASQV-TNICISS-KSFLPLS 1207
+G + + G + A L++ I +E S++ N+ + FL
Sbjct: 1371 LGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTEIDGFL--- 1427
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ LE LG+ F RG LLQA HPSF NR+ GCYQ LEF+GDA+LD+LI++Y++
Sbjct: 1428 --INHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISAYIF 1485
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM----- 1320
K+ PG LTDLRS LVNN A + V + F++ ++ L+E+I +V +
Sbjct: 1486 ENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQESQRH 1545
Query: 1321 --------------ITPS--------------------STREVKEGPR-----------C 1335
+ P+ S E + P
Sbjct: 1546 RVTNHVRILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNDPAKGDFNMSTNVDV 1605
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLE 1388
PK LGD++E + AI LD +L W+++ + P L+ F+ N+ +N IR+L E
Sbjct: 1606 PKALGDVLEXLIAAIYLDCR-DLQRTWEVIFNLFKPELQEFTRNVPINAIRQLTE 1659
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 242/1043 (23%), Positives = 422/1043 (40%), Gaps = 134/1043 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQL L + N IVYL TG GKT +A+L + + + K ++ +F+ TV
Sbjct: 2 RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
L +QQ ++ V + G + W EI ++VLV Q+ L + +
Sbjct: 62 LARQQTVAVQRLTNLTVGFYVGEQGVDDWTRGQWSDEIQDHQVLVGTAQVFLDMFTQKHM 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASPVVGKGASAQA 234
+ ++++I DECHH +HPY + M+ F + + +PR+ G+T V+ KG +
Sbjct: 122 TLSSVSVVIMDECHHG--TGHHPYHEFMRLFLCAEKNINLPRVVGLTG--VLIKGNEIK- 176
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP---VINDTSSSYVTCSEQ 291
+ K + LE + +V D E++E+ V +Y P +I S V Q
Sbjct: 177 QVVKKLKELEITYRGNIITVSDTEEMEN------VMLYSTKPKEYLITYPSQERVFMVTQ 230
Query: 292 LAEIKREQYISALS---------RKLHDHQSLRNTTKQ--LNRLHDSMKFCLENLGVCGA 340
+ + +Q+ L R+ Q R+ K+ + +L + F L+ G+ A
Sbjct: 231 SIQSQIQQFFVTLDLMDIGVQPVRRSKSLQCQRDPQKKSSVKQLFNDFLFQLQEYGIYAA 290
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
A L+ + R + + + + + R D +V
Sbjct: 291 SIAIISLIVEFDLKRRQAETLSLKLMHRTAMSLCEKIRHLLVQKLRDMTDEDDDPDDKVN 350
Query: 401 KE----PFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNL-----K 448
E F + K+ R + L T + K C+VFV R T + + +L N +
Sbjct: 351 TEEVILSFSTPKVQRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLLNFIDSTPE 410
Query: 449 FLASWRCHFLVGVNAGLKS----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F+VG N + + R KS +++FR G NL++ + V EEG+D+Q C
Sbjct: 411 LRNVLTPQFMVGRNTISQDFESVIERKHQKSAIQQFRDGNANLMICSSVLEEGIDVQACN 470
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFL---VDSG--NQRELDLIKNFSKEEDRMNR 559
V+ D +T ++Q++GRAR + + +D G +Q+ ++ + +
Sbjct: 471 YVLILDPLKTFNMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKL 530
Query: 560 EIMDRTSSDAFTCSE--ERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEF------- 608
+++RT + + + + + + ++ GA + + LLHRYC +P D F
Sbjct: 531 RVLERTEPEMYEVKQHFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPWI 590
Query: 609 --FNPKPKFYYFDDLGGT--ICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLH 663
+ F D + + I LP N+ + I P +++AAK A K + L+
Sbjct: 591 NSLQEDTRKILFGDCARSKEVVSIKLPLNSKLKDTIYSDPMDNVKAAKISAAFKTCKLLY 650
Query: 664 KLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLV----PAVLRQSWTKS 719
+LG LN+ LP T E + +D +E G+ +V P V+R T
Sbjct: 651 QLGELNERFLP----ITLKERVAAIADV-HFEHWKKYGDDVTAIVRKNAPKVVRNYKTDC 705
Query: 720 Q---YPVR-----LNFYFMQFIP------DPADRIY------REFGLFVKSLLPGEAEHL 759
Y R L + + F+ D + +Y R + + +++ LP AE
Sbjct: 706 PAEFYDARPRVGELCYAYEIFLEPQFESCDYTEHMYVNLRTPRNYAILMRNKLPRLAEMP 765
Query: 760 ----KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCES 815
+ LH+ + K+V Q + + V D + F L +
Sbjct: 766 LFSNQGKLHVRVANEPL-KVVIQNSEQLELLHQFHGMVFRDLLKIWQPFFVLDR-----R 819
Query: 816 SSSTFYLLLPVIF---HKNSVDWKIIRRCLSSPVFGTPGGSV-DRKSLPSHGPLQLHNGW 871
S YL++P+I + +DW ++ + P SV RK + P
Sbjct: 820 SKENSYLVVPLILGADQQKCIDWPLVTKFQRLP--QAENSSVHQRKQQTAPRP------- 870
Query: 872 SSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPY-KDSDSSSHVDHLISSYGIHLK 927
D E +V YA + LVT + E S K+ ++ + +S YG H+
Sbjct: 871 ---EDFEGKIVSQWYANFEHKRMLVTKVHRELTPLSLMEKNHQDKTYYEFTMSKYGNHIG 927
Query: 928 ---HPKQPLLRAKPLF-RLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIG 983
H + ++ + L +L + NR ++S + L PELC F D+
Sbjct: 928 DVVHKDKFMIEVRELTDQLNFYVQNRGKSSAQSKARAKII--LIPELC--FNYEFPGDLW 983
Query: 984 SSLSLLPSIMHRLENLLVAIELK 1006
L LPSI+ R+ LL A L+
Sbjct: 984 LKLIFLPSILRRMHFLLHAEGLR 1006
>gi|164424566|ref|XP_963538.2| hypothetical protein NCU06766 [Neurospora crassa OR74A]
gi|157070568|gb|EAA34302.2| predicted protein [Neurospora crassa OR74A]
Length = 1421
Score = 153 bits (386), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 181/669 (27%), Positives = 291/669 (43%), Gaps = 102/669 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + ++++NII++ + +A H + I FL PTVAL
Sbjct: 71 ARAYQLEMFEASLKQNIILF----SDRVMVAD------GHWQWQDSGRIW-FLTPTVALA 119
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ +V++ I K CG G W+ + ++V QIL H F+
Sbjct: 120 RQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSFV 179
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASA 232
+++ ++L++ DE H+ +HP A++M + Y P + VP I G+TASP+
Sbjct: 180 RLDSLSLIVIDEAHNC--SGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPL------- 230
Query: 233 QANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYG-----PVINDTSSSYV 286
++N I LE +LDA + E+L + V+ P + V YG P D + ++
Sbjct: 231 KSNNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRFL 290
Query: 287 TCSEQLAEIKREQYISAL--SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV-----CG 339
+L +I ++ + L R + LR + + L + N + G
Sbjct: 291 EAYHRL-DISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYNRALLVRREIG 349
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
A Y L M EL E + R+ +A + +
Sbjct: 350 PWAADYYLTRTVSHMLAELERGEP----PAQHRYIGEA-------------LRSIPIPAI 392
Query: 400 LKEPF-FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCHF 457
KEP S K+ L+ +L++ QQ IVFV V +++I+ +R
Sbjct: 393 SKEPIQLSPKVQTLLKVLASH--QQDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTAS 450
Query: 458 LVGVNAGLKSMSRNAMK-------SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
++G A + +RN M + LE FR G NLLVAT V EEG+D+ C LVI FD
Sbjct: 451 MIGT-ASVPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFD 509
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD-------LIKNFSKEEDRMNR--EI 561
P + SFIQ RGRAR S +V + + L+K ++E R N E+
Sbjct: 510 EPSNIKSFIQRRGRAREVSSTLYLMVQNASSESATDWHNLERLMKERYEDEMRQNAELEL 569
Query: 562 MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK-------LPHDEFF----- 609
+D ++ + +V+S+GA ++ S L+ +C+K L + +F
Sbjct: 570 LDDPRIGSYP-----VLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYFVIRQV 624
Query: 610 NPKPKFYYFDDLGGTICHIILPAN-AP---IHQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
NP P L H LPA+ AP H+ + T +S + A DA +A + L+
Sbjct: 625 NPDPASPGRRTLLQATVH--LPASLAPDLRRHESLWT-WTSEKLAIMDASFQAYKALYNA 681
Query: 666 GALNDYLLP 674
G +N+ LLP
Sbjct: 682 GLVNENLLP 690
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAA---TAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
+ K +ADVVE+L+GA G A A L +F+ ++ F P
Sbjct: 973 MSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEIELSRTQLFEFAPK 1032
Query: 1207 SASL--DMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLIT 1261
A L + LE + + F + LL++A HPS LG CY+RLEFLGDA+LD ++
Sbjct: 1033 DAILSKQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERLEFLGDAILDVIVV 1092
Query: 1262 SYLYS 1266
L +
Sbjct: 1093 KRLMA 1097
>gi|347440704|emb|CCD33625.1| hypothetical protein [Botryotinia fuckeliana]
Length = 921
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA------HLIRKPQKSICIFLAP 113
R YQLEL +KA ++NII L TG GKT IAVLL+ + I KP + + FL
Sbjct: 512 RDYQLELFEKAKKQNIIAVLDTGSGKTFIAVLLLRWIIDQELEDRAIGKPHR-VSFFLVD 570
Query: 114 TVALVQQQAKVIEESIGFKVRTFCG-GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
+V L QQ V+ ++ CG L H W+K +D V+V +IL CL+H
Sbjct: 571 SVTLCHQQHSVLRNNLNQPTDMICGLMGTDLSDHIKWKKRLDTNMVIVCTAEILRQCLHH 630
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
F+ M I LLIFDE HHA K +HPYA+I+KDFY+ D K +P+IFGMTASPV
Sbjct: 631 SFVTMAQINLLIFDEAHHA--KKDHPYARIIKDFYRNDTEKDIALPKIFGMTASPV---- 684
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV 277
A+ N+ K+ LE LL +++ + ED L+ + + Y P+
Sbjct: 685 -DARDNVKKAAEELEGLLHSQICTAEDPSLLQYSIKGKPETLAYYDPL 731
>gi|47210543|emb|CAF93935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 479
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 145/279 (51%), Gaps = 42/279 (15%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-EFEASQVTNICISSKSF-------- 1203
K+IAD VEAL+G ++ G +AA FL +G++V E S ++
Sbjct: 139 KSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEQGAAAGAAQSGRTAASDLCYGW 198
Query: 1204 --LPLSASLDMATLEILLGH--------------QFLHRGLLLQAFVHPSF--NRLGGCY 1245
+P LD E L H F ++ LLQAF H S+ N + CY
Sbjct: 199 LKIPPRCMLDHPDAEHTLNHLISGFENFERKISYTFQNKAYLLQAFTHASYHYNTITDCY 258
Query: 1246 QRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFD 1305
QRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+
Sbjct: 259 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAI 318
Query: 1306 SNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAILL 1352
S L I+++V + + + + + R PK +GD+ ES GAI +
Sbjct: 319 SPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYM 378
Query: 1353 DSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
DSG +L TVW++ + P++ KFS N+ +P+RELLE+
Sbjct: 379 DSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 417
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 78/198 (39%), Gaps = 28/198 (14%)
Query: 990 PSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERF---SLERLEIL 1045
P H L +L+ E + +S +F A LL+A T +RLE L
Sbjct: 210 PDAEHTLNHLISGFENFERKISYTFQNKA-----YLLQAFTHASYHYNTITDCYQRLEFL 264
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GDA L Y + +HL+ G LT RS VNN+ LA + + Y + P
Sbjct: 265 GDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK--AISPEL 322
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KTIADVVE 1160
F + + + Q + +++E+R S+ + K + D+ E
Sbjct: 323 FHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFE 370
Query: 1161 ALVGAFIDDSGFKAATAF 1178
+L GA DSG T +
Sbjct: 371 SLAGAIYMDSGMSLETVW 388
>gi|384494893|gb|EIE85384.1| hypothetical protein RO3G_10094 [Rhizopus delemar RA 99-880]
Length = 407
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 199/424 (46%), Gaps = 51/424 (12%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
L PE + +I S + + L+P I+ +++ L+ +LK + + F + E++L
Sbjct: 13 LKPE--EHRIFPISASVYQASQLIPDILLQIDAFLLIQQLKTVHNLQF-----IDDELML 65
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+A T+ + ERLE LGDA LK+ V +L+ + T E ELT R +N +
Sbjct: 66 EAFTSPSANRKQDYERLEFLGDAVLKFIVSSYLYAKYPTYSEAELTSLRQVMTSNKSFAN 125
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
+A L YI Q + RR R P + +K
Sbjct: 126 IAKDLKLHRYIISQ--------STVRRFWR------------------PPHFQNVLDSNK 159
Query: 1146 GHHWL-----HKKTIADVVEALVGAF-----IDDSGFKAATAFLKWIGIQVEFEASQVTN 1195
HWL T+AD++E+ VGA ID + + A L I+V S + +
Sbjct: 160 IKHWLTHHLVSDNTLADIIESTVGAAFLSQSIDGAIYAATQLKLPLGSIKV---WSDLRH 216
Query: 1196 ICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS-FNRLGGCYQRLEFLGDA 1254
I S + ++D+ + +LG+QF + L+ +A H S + L CY+RLEFLGDA
Sbjct: 217 IWTPSPASATGQINIDVVRVGEMLGYQFKNYLLVQEALTHGSVMDSLVPCYERLEFLGDA 276
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN 1314
+LD+ +T Y+Y +P PG L +LR VN+ + V ++ K +I S ++ +I
Sbjct: 277 ILDFFVTQYIYQKHPTAAPGILHNLRKSSVNHHILSAVCLNMGLDKHIIHVSAEIAASIL 336
Query: 1315 N----YVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD 1370
+ D T E PKVL D++ES +GAIL+DSGF++N V + +
Sbjct: 337 KAEAIHKDMQSKGKDTDEYWLHLNPPKVLSDVIESLMGAILVDSGFDINQVEEFFERWFK 396
Query: 1371 PILK 1374
PIL+
Sbjct: 397 PILE 400
>gi|348544424|ref|XP_003459681.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Oreochromis niloticus]
Length = 1917
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 146/282 (51%), Gaps = 46/282 (16%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTNICI 1198
K+IAD VEAL+G ++ G +AA FL +G++V +QV ++C
Sbjct: 1575 KSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLERGTLTGAVAQVHTHTQVADLCY 1634
Query: 1199 SSKSFLPLSASLDMATLEILLGH--------------QFLHRGLLLQAFVHPSF--NRLG 1242
+P LD E L H F ++ LLQAF H S+ N +
Sbjct: 1635 GWLK-IPPRCMLDHPDAERTLNHLISGFENFEKKINYTFKNKAYLLQAFTHASYHYNTIT 1693
Query: 1243 GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+
Sbjct: 1694 DCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYF 1753
Query: 1303 IFDSNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGA 1349
S L I+++V + + + + + R PK +GD+ ES GA
Sbjct: 1754 KAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGA 1813
Query: 1350 ILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
I +DS +L TVW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1814 IYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1855
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 163/660 (24%), Positives = 268/660 (40%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G + G K+ +RN +
Sbjct: 446 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG-KNQARNKQMEVEFRKQEE 504
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYIML 564
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+G + EED + +I+ S + SE + +V
Sbjct: 565 ADTGRTKAF--------EEDLSTYKAIEKILRNKCSKSVEVSEFEVEQVMDDDNILPPYV 616
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ G ++ + ++RYC++LP D F + PK + G + LP N+P+
Sbjct: 617 LRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVEMGDGYFQSTLYLPINSPL 676
Query: 637 HQIVGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
V P + A+K L E LHK+G L+D+L+P + D +
Sbjct: 677 RVPVKGPVMNCARLAEKAVALVCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 736
Query: 691 SDSYEGEGSRGELHEMLVP-------AVLRQSW--------TKSQYPVRLNFYFMQFIPD 735
G R + + +P AV QS+ + P LNF + P
Sbjct: 737 VPGRPGSTKRRQCYPKAIPECLCDCYAVPEQSYYLYVIGMVLTTPLPDELNFRRRKLYP- 795
Query: 736 PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQ 787
P D R FG+ +P + + + + L + +T I + Q+
Sbjct: 796 PEDTT-RCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLTTAQLDLITRLHQY- 853
Query: 788 EMFLKVILDRSEFNSEFVPLGKDD-YCESSSSTFYLLLPVIFHKNS--VDWKIIRRCLSS 844
IL + EF+P D YC L L V+ N+ +D+K + S
Sbjct: 854 --IFSHILRLEKPALEFMPTMADSAYC-------VLPLNVVGDSNTLDMDFKFMEDIEKS 904
Query: 845 PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
R +P+ + + D +++++ ++ + FY V ++ +
Sbjct: 905 EA---------RTGIPTTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYTD 954
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 LTPLSKFPSPEYETFAEYYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1014
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1072
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSIC---IFLAPTVA 116
RKYQ+EL + A+E N IV L TG GKT IAVLL EL+H IR P + +FL T +
Sbjct: 46 RKYQVELLEAALERNTIVCLNTGSGKTFIAVLLTKELSHQIRGPYQENAKRTVFLVNTAS 105
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA + V + + L + W +EI + +VLVM I L+ L ++ +
Sbjct: 106 SVVQQAAAVRTHSDLSVGEYTDLEETLAWTDQRWSREIIENQVLVMTCHIFLHVLKNKIL 165
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I L++FD+CH A ++HPY +IMK F PRI G+TAS + GK ++
Sbjct: 166 PLSKINLVVFDDCHLA--ITDHPYCQIMKLFE--GCSCTPRILGLTASILNGKCDPSE-- 219
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
L + I +LE +L + + D L+ + S P V G ++ + S
Sbjct: 220 LEQKIQNLERILKSNAETATDLVVLDRYASQPREVVLDCGSYVDKSGLS 268
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%)
Query: 1010 SASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGE 1069
+A+ P+ + ++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG
Sbjct: 1277 AANSPKNLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGR 1336
Query: 1070 LTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP 1103
L+ RS V+N NL +L + L + FDP
Sbjct: 1337 LSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDP 1370
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1289 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1347
Score = 40.8 bits (94), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1697 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 1754
>gi|432936630|ref|XP_004082201.1| PREDICTED: endoribonuclease Dicer-like [Oryzias latipes]
Length = 1890
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 145/280 (51%), Gaps = 43/280 (15%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSFLPLSAS 1209
K+IAD VEAL+G ++ G +AA FL +G++V E S+ + S S LS
Sbjct: 1549 KSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPSEPGTSRASKAPSSRTSAADLSYG 1608
Query: 1210 LDMATLEILLGH-----------------------QFLHRGLLLQAFVHPS--FNRLGGC 1244
+L H F ++ LLQAF H S +N + C
Sbjct: 1609 WLKIPPRCMLAHPDAERTLQHLISGFENFEKKINYSFQNKAYLLQAFTHASYHYNTITDC 1668
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+
Sbjct: 1669 YQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 1728
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAIL 1351
S L I+++V + + + + + R PK +GD+ ES GAI
Sbjct: 1729 ISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIY 1788
Query: 1352 LDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
+DSG +L TVW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1789 MDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1828
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 164/652 (25%), Positives = 262/652 (40%), Gaps = 98/652 (15%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G + G K+ +RN +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG-KNQARNKQMEVEFRKQEE 493
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 494 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYIML 553
Query: 536 VDSGNQREL--DLIKNFSKEEDRMNR--------EIMDRTSSDAFTCSEERIYKVDSSGA 585
DS + DL + E+ N+ E D + + + G
Sbjct: 554 ADSERTQAFQEDLTTYKAIEKILRNKCSKSVEVGEFDGEQVVDDDNILPPYVLRSEDGGP 613
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH-QIVGTP 643
++ + ++RYC++LP D F + PK + G + LP N+P+ I G
Sbjct: 614 RVTVNTAIGHINRYCARLPSDPFTHLAPKCKTVETGNGRFQSTLYLPINSPLRVPIKGPT 673
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEG 698
A+K L E LHK+G L+D+L+P + D + G
Sbjct: 674 MHCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 733
Query: 699 SRGELHEMLVPAVLRQSWT---------------KSQYPVRLNFYFMQFIPDPADRIYRE 743
R + + +P LR S+ + P LNF + P P D R
Sbjct: 734 KRRQCYPKAIPECLRDSYAVPEQTYYLYVIGMVLTTPLPDELNFRRRKLYP-PEDTT-RT 791
Query: 744 FGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGI-MQAQQ------FQEMFLKVIL 795
FG+ +P H V + G ++ +L SG + A Q + IL
Sbjct: 792 FGILTAKPIP-RIPHFPV--YTRSGEVTISIELQKSGFTLSAAQLDLITRLHQYIFSHIL 848
Query: 796 DRSEFNSEFVPLGKDD-YCESSSSTFYLLLPVIFHKNS--VDWKIIRRCLSSPVFGTPGG 852
+ EF P D YC L L V+ N+ +D+K + S
Sbjct: 849 RLEKPALEFKPTVADSAYC-------VLPLNVVGDSNTLDMDFKFMEDIEKSEA------ 895
Query: 853 SVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYK 907
R +P+ + + D +++++ ++ + FY V ++ S +
Sbjct: 896 ---RTGIPTTKYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYTYLTPLSKFP 951
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELE 960
+ + ++ + Y + L + QPLL NLL R L S + + +
Sbjct: 952 SPEYETFAEYYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRK 1011
Query: 961 EYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1012 AKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1061
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 10/229 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A+E N IV L TG GKT IAVLL EL+H IR + +FLA +
Sbjct: 35 RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLTKELSHQIRGSYQENARRTVFLANATS 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQA + V + + S W +EI +VLVM + L+ L + +
Sbjct: 95 SAVQQAAAVRTHSDLHVGEYSDPQEATTWSRQRWSREIADNQVLVMTCHVFLHVLTNHIL 154
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I L++FD+CH A + HPY ++MK F + RI G+TAS + GK ++
Sbjct: 155 PLSKINLVVFDDCHLA--ITEHPYCEVMKLFEEHTCGS--RILGLTASILNGKCDPSE-- 208
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
L + I +LE +L + + D L+ + P V GP ++ + S
Sbjct: 209 LEQKIQNLERILKSSAETATDLVVLDRYACQPREVVLDCGPYMDKSGLS 257
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1267 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1326
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1327 LYRLGKKKGLPSRMVVSIFDP 1347
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1266 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1324
Score = 43.9 bits (102), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1670 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA- 1728
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1729 -ISPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1775
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1776 MGDIFESLAGAIYMDSGMSLETVW 1799
>gi|116196272|ref|XP_001223948.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
gi|88180647|gb|EAQ88115.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
Length = 1476
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 174/644 (27%), Positives = 263/644 (40%), Gaps = 101/644 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL ++A +N I L TG GKT IA LL+ EL ++ K I FL
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
VALV QQ V+ ++ + + FCG + W K D+ +V +IL CL H +
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDVTQDFWHKTFDENMAIVCTAEILYQCLTHSY 255
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
I+M+ MTASPV + A
Sbjct: 256 IRMDQ---------------------------------------AMTASPVDAQIDPKIA 276
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
P+ LE LL +++ +V D L + SS ++ + + Y C L E
Sbjct: 277 RSPE----LEGLLHSQIATVADPTALHN--SSTKLK--------REVTVEYGKC---LPE 319
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
+ + L+R L D L + + LG A + G+E
Sbjct: 320 FE-----TGLNRALKD---LVGEHRLFQKPFAFTATAASELGPWCADRYWQLFFRGEE-- 369
Query: 355 RNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP---FFSKKLLR 411
+++ E T + L + S S+ AA + A L P S K++
Sbjct: 370 ---VVKLEAKTEREILRK--SAYSQEIAAQVNKVREAHRLVGQHEFASPSSDLLSSKVVI 424
Query: 412 LIGIL-STFRLQQH-MKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVNA----- 463
L+ IL FR H +CIVFV + A L+ +LQ + + LVG
Sbjct: 425 LLRILRGEFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGLEPGILVGGGRPEASY 484
Query: 464 -GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
K R+ + +I+ KF+ GELN + AT V EEGLDI C ++IR+DL T+ +IQSR
Sbjct: 485 DNAKVTYRDQVLTII-KFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYIQSR 543
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS--------- 573
GRAR S Y +V+S N+ + + + ED + + + T +
Sbjct: 544 GRARQEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEALPADRKLTGNNFDMEYFLR 603
Query: 574 ---EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIIL 630
++R Y V +GA ++ + L + + LPH N + GG C + L
Sbjct: 604 KEKDQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTAGYLVLSVPGGYQCEVTL 663
Query: 631 PANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
P ++PI G +S AK A + L K L+ +L P
Sbjct: 664 PESSPIRSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLRP 707
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 172/424 (40%), Gaps = 94/424 (22%)
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL--- 1039
P+IMHR+++ LVA+E +L+ + V ++ L+A T E E+ S
Sbjct: 978 FPAIMHRIDSNLVALEACKMLNLN------VRPDLALEAFTKDSDNSGEHDAEQISFQSG 1031
Query: 1040 -----ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
ERLE LGD FLK A +F L E E R + N NL A L+
Sbjct: 1032 MGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALEVKLEE 1091
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
+IR FD ++ G + K+ R H L KT
Sbjct: 1092 HIRSMAFDRRSWYPEGLTLKKGKRKDLTR-----------------------QHVLADKT 1128
Query: 1155 IADVVEALVGAFIDDSGFKAATAF---LKWIGIQVEFEASQVTNICISSKSFLPL----- 1206
IADV EAL+GA + + F ++ + + V+ + +T+ ++ P
Sbjct: 1129 IADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAWQTA 1188
Query: 1207 ---SASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYL 1259
S LDMA E +G+ F H LL AF HP++ + YQRLEFLGDA+LD
Sbjct: 1189 PCNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALLDMA 1248
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD---QSFYKFLIFDSNVLSETINNY 1316
+L+ +P P T N A D +SF +
Sbjct: 1249 SVEFLFHRFPGADPQSKTP-----CNRHATTPSPGDLPAESFAR---------------- 1287
Query: 1317 VDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFS 1376
D+ + S R PK L D+VE+ +GA+ +DS ++ V + P F
Sbjct: 1288 -DFWVRCS---------RPPKCLPDVVEAYVGAVFVDSRYDFARVRAFFADHVRPF--FE 1335
Query: 1377 NLQL 1380
+++L
Sbjct: 1336 DMRL 1339
>gi|410928196|ref|XP_003977487.1| PREDICTED: endoribonuclease Dicer-like [Takifugu rubripes]
Length = 1883
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 146/280 (52%), Gaps = 44/280 (15%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-EFEASQVT-----------NICISS 1200
K+IAD VEAL+G ++ G +AA FL +G++V E VT ++C
Sbjct: 1543 KSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEEGVVTGPRRSHGTTAVDLCYGW 1602
Query: 1201 KSFLPLSASLDMATLEILLGH--------------QFLHRGLLLQAFVHPSF--NRLGGC 1244
P S LD E L H F ++ LLQAF H S+ N + C
Sbjct: 1603 LKIPPRSM-LDHPDAEHTLHHLISGFENFERKINYTFQNKAYLLQAFTHASYHYNTITDC 1661
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+
Sbjct: 1662 YQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 1721
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAIL 1351
S L I+++V + + + + + R PK +GD+ ES GAI
Sbjct: 1722 ISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIY 1781
Query: 1352 LDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
+DS +L TVW+I + P++ KFS N+ +P+RELLE+
Sbjct: 1782 MDSRMSLETVWQIYYPMMRPLIEKFSANVPRSPVRELLEM 1821
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 162/660 (24%), Positives = 267/660 (40%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAMK------ 474
I+FV R TA L+ +++ L +++S +F+ G + G + M+
Sbjct: 434 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHSIGKYQLRNKQMEVEFRKQ 490
Query: 475 -SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 491 EEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYI 550
Query: 534 FLVDSGNQR----ELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKV--------- 580
L DS + +L K K I+ S + SE + +V
Sbjct: 551 MLADSERTKVFKEDLSTYKAIEK--------ILRNKCSKSVEVSEFEVEQVFDDDYIIPP 602
Query: 581 -----DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANA 634
+ G ++ + ++RYC++LP D F + PK + G + LP N+
Sbjct: 603 YVLRSEDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPKCKTVEIQSGLFQSRLYLPINS 662
Query: 635 PIHQIVGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFS 688
P+ V P + + A+K L E LHK+G L+D+L+P + D
Sbjct: 663 PLRIPVKGPIMNCIRLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEE 722
Query: 689 SDSDSYEGEGSRGELHEMLVPAVLRQSWT---------------KSQYPVRLNFYFMQFI 733
+ G R + + +P L S+ + P LNF +
Sbjct: 723 TSVPGRPGSTKRRQCYPKAIPECLWDSYAVLDQIYYLYVIGMVLTTPLPDELNFRRRKLY 782
Query: 734 PDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSG--IMQAQ-----Q 785
P P D R FG+ +P + H V + G ++ +L SG + AQ +
Sbjct: 783 P-PEDTT-RCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELQKSGFSLTAAQLDLITR 837
Query: 786 FQEMFLKVILDRSEFNSEFVPLGKDD-YCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSS 844
IL + EF PL D YC L L ++ + N++D +
Sbjct: 838 LHHYIFSHILRLEKPALEFKPLQADSAYC-------VLPLNIVGNSNTLD-------MDF 883
Query: 845 PVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
S R +P+ + + D +++++ ++ + FY V ++ +
Sbjct: 884 QFMEDIEKSEARTGIPTTQYTKQNPFSFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYTD 942
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 943 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1002
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1003 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1060
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A+E N IV L +G GKT IAVLL EL+H IR + +FL T A
Sbjct: 35 RKYQVELLEAALEHNTIVCLNSGSGKTFIAVLLTKELSHQIRGCYREAAKRTVFLVNTAA 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V +QA + +V + K + W +E+ + +VLVM I LY L + +
Sbjct: 95 SVAEQAAAVRTHSDLQVGEYSDLEKMTWTDQRWSQEMTENQVLVMTCHIFLYILKRQILL 154
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ I L++FD+CH A ++HPY +IMK Y + PRI G+TAS + GK ++ L
Sbjct: 155 LSKINLVVFDDCHLA--IADHPYCEIMK--YFEGVTNSPRILGLTASILNGKCDPSE--L 208
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
+ I +LE L + + D L+ + S P V GP ++ + CS AE+
Sbjct: 209 EEKIQNLERTLKSNAETATDLVVLDRYASQPREMVLDCGPYVDKSG----LCSRLQAEL 263
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1262 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1321
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1322 LYRLGKKKGLPSRMVVSIFDP 1342
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1261 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1319
Score = 40.8 bits (94), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1663 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1720
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1721 AISPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1768
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DS T +
Sbjct: 1769 MGDIFESLAGAIYMDSRMSLETVW 1792
>gi|37266499|gb|AAQ90464.1| Dicer1 [Danio rerio]
Length = 1243
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSFLPLSAS 1209
K+IAD VEAL+G ++ G +AA FL +G++V E ++S + +P
Sbjct: 911 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPPRCM 970
Query: 1210 LDMATLEILLGH--------------QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
+ E L H F ++ LLQAF H S+ N + CYQRLEFLGD
Sbjct: 971 FEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGD 1030
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
A+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 1031 AILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVI 1090
Query: 1314 NNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAILLDSGFNLNT 1360
+++V + + + + + R PK +GD+ ES GAI +DSG +L T
Sbjct: 1091 DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLET 1150
Query: 1361 VWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1151 VWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1181
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 656 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 715
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 716 LYRLGKKKGLPSRMVVSIFDP 736
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 187/470 (39%), Gaps = 68/470 (14%)
Query: 592 GVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTICHIILPANAPIH-QIVGTPQSSMEA 649
+ ++RYC++LP D F + PK + + GG + LP N+P+ + G +
Sbjct: 5 AIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRSTLFLPINSPLRVPVTGPVMNCARL 64
Query: 650 AKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGEL-HEMLV 708
A+K L E LHK+G L+D+L+P + E L D + G G
Sbjct: 65 AEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCS 124
Query: 709 PAVLRQSW--------TKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLK 760
P ++Q + P LNF + P P D R FG+ +P H
Sbjct: 125 PKAVKQPCYLYVIGMVLTTPLPDELNFRRRKLYP-PEDTT-RCFGILTAKPIP-RIPHFP 181
Query: 761 VDLHLARGR-SVMTKLVPSGI-MQAQQFQ------EMFLKVILDRSEFNSEFVPLGKDDY 812
V + G ++ +L SG + A+Q + + IL + EF P+ D
Sbjct: 182 V--YTRSGEVTISIELQKSGFSLSAEQLELITRLHQYIFSHILRLEKPALEFKPVEAD-- 237
Query: 813 CESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV-FGTPGGSVDRKSLPSHGPLQL 867
+ Y +LP+ ++S +D+K + S G P +++ P L+
Sbjct: 238 ------SAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQYTKQN-PFIFKLE- 289
Query: 868 HNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSY 922
D +++++ ++ + FY V ++ + S + + + ++ + Y
Sbjct: 290 --------DYQDAVIIPKYRNFDQPHRFY-VADVYTDLTPLSKFPSPEYETFAEYYKTKY 340
Query: 923 GIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELEEYFDDLP------PE 969
+ L + QPLL NLL R L S + + + ++ L PE
Sbjct: 341 NLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPE 400
Query: 970 LCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEV 1019
LC + I S + LPSI++RL LL A EL+ + GA+
Sbjct: 401 LCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQT 448
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA S G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 655 GLILQALTL-SNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 713
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1023 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA- 1081
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1082 -VSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1128
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1129 MGDIFESLAGAIYMDSGMSLETVW 1152
>gi|405960420|gb|EKC26346.1| Endoribonuclease Dicer [Crassostrea gigas]
Length = 1759
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 143/273 (52%), Gaps = 31/273 (11%)
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEASQVTNICISS 1200
H + K+IAD VE+L+G ++ G KAA F+ W+G++V + +++ ++
Sbjct: 1426 HSIPDKSIADCVESLIGCYLTSCGKKAALKFMHWLGLKVLPQKKKGMVQDTELLSLQCPD 1485
Query: 1201 KSFL---PLSASL------DMATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLE 1249
L P S+ TLE +G++F + LLQAF H S +N + CYQRLE
Sbjct: 1486 SPLLVHVPDHNSILHRLLEGYDTLEQKIGYEFRDKSYLLQAFTHASYHYNTVTDCYQRLE 1545
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDA+LDY+IT +LY K PG LTDLRS LVNN FA +AV F+K+ S L
Sbjct: 1546 FLGDAILDYVITRHLYEDSCKYSPGVLTDLRSALVNNNIFAALAVKWDFHKYFKAISPPL 1605
Query: 1310 SETINNYVDYMITPSSTREVKEG-----------PRCPKVLGDLVESSLGAILLDSGFNL 1358
I +V ++ + PK LGD+ ES GAI LDS +L
Sbjct: 1606 FGVIEKFVARQKEREDEIDLSDDEGEGEEEEHVELEVPKALGDIFESLAGAIYLDSKMSL 1665
Query: 1359 NTVWKIMLSFLDPILKFSNLQL--NPIRELLEL 1389
+TVW++ + P + L + +P+RELLE+
Sbjct: 1666 DTVWRVYYRIMKPQIDKYLLSIPKSPVRELLEM 1698
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
Query: 422 QQHMKCIVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNAMK 474
++++ IVFV A A++ L+ NL F+ S + K + +
Sbjct: 463 EKYLCGIVFVEHRYVALAINKFLEEVCSWDENLCFVKSQHLTGQGLKDGKSKKGNWKKQE 522
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L KFR +LNLLV+T V E+G+D+ C L+++FD P + S+ QS+GRAR SEY
Sbjct: 523 DVLRKFRLQDLNLLVSTTVLEDGIDVPKCNLIVKFDPPRSYKSYSQSKGRARARDSEYLI 582
Query: 535 LVDSGNQRELDL--IKNFSKEEDRMNREIMDRTSSDAFTCSEER-------IYKVDSSGA 585
LV+ N++E+ + F ED + + + E+ + D+
Sbjct: 583 LVEE-NKKEMFMQDYNVFKGIEDVLVDRRNEEEDEEEDNHCEDTSKVLLPYMPSSDNPHI 641
Query: 586 CISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTI--CHIILPANAPIHQIV- 640
C++ ++ ++RYC+KLP D F PK GGT+ + LP N+P + V
Sbjct: 642 CVTVETAIAFVNRYCAKLPSDAFTHLTPKCTLQEISGEGGTMYRATLNLPINSPYKRSVQ 701
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
G + AK+ LK + LH+ G L+D L P
Sbjct: 702 GEVMPTKNLAKRAVALKLCQCLHEAGELDDQLNP 735
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 63 QLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK------PQKSICIFLAPTVA 116
Q+EL A++ N IV LGT G T I+V+L+ E + +RK + +C+ ++
Sbjct: 35 QVELLDAALQRNTIVCLGTSGGNTFISVMLLKEFSTELRKQLQCGGKRSVVCLNSDESIQ 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
+ Q K + V +L S ++ +++LV P + L +F+
Sbjct: 95 EISQVIKHHSDLNVMPVYELSEDESKLNSM------LNDHQILVTKPSVFNDILLKKFLL 148
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK--VPRIFGMTASPVVGKGASAQA 234
I L+I + CH + HPY I+ + + K RI G+T+S + +
Sbjct: 149 PVQINLVILENCHLI-LHEEHPYQSIINIIHN-SVRKEAAARILGLTSS-FISQKCQDPG 205
Query: 235 NLPKSINSLENLLDAK 250
L I SLEN L A+
Sbjct: 206 ELEHIIRSLENHLSAR 221
Score = 43.5 bits (101), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 11/145 (7%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA + + Y +
Sbjct: 1542 QRLEFLGDAILDYVITRHLYEDSCKYSPGVLTDLRSALVNNNIFAALAVKWDFHKYFK-- 1599
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
P F + + R +E E + D E + K + D+
Sbjct: 1600 AISPPLFGVIEKFVARQKEREDEIDL---------SDDEGEGEEEEHVELEVPKALGDIF 1650
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGI 1184
E+L GA DS T + + I
Sbjct: 1651 ESLAGAIYLDSKMSLDTVWRVYYRI 1675
>gi|134079420|emb|CAK40801.1| unnamed protein product [Aspergillus niger]
Length = 1379
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 180/703 (25%), Positives = 312/703 (44%), Gaps = 98/703 (13%)
Query: 35 VSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY 94
S + A+S+ G T + + R+YQLE+ ++++ N+IV + TG GKT + Y
Sbjct: 2 TSSTDYHADSTPG---TTSNMELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVYDESYY 58
Query: 95 ELAHLIRKPQKSICIFLA---------------PTVALVQQQAKVIEESIGFKVRTFCGG 139
H+ + ++I LA PTVAL +QQ I + G
Sbjct: 59 VFDHMANRSNRAILRILADIDKGNSDKFVWLLCPTVALSEQQY------IQYATVFLPSG 112
Query: 140 SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPY 199
++ W+ + ++ V Q+L L H F+K+ ++LLIFDE HH K +H
Sbjct: 113 AE---DKAIWDNALSGIKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHC--KKDHVA 167
Query: 200 AKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAE- 258
KIM+ Y + S NLPK + + + + + S+E E
Sbjct: 168 NKIMQVHYH------------------KQHQSGVQNLPKILGLTASPILSDLSSLEIVES 209
Query: 259 DLESFVSSP---VVRVYQYG--PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQS 313
+L S +P ++ Q+ P+I +Y + + E+ LS + S
Sbjct: 210 NLGSICKTPRQYYAQLLQFTNRPLILPRLPTYTIPNCSVKAPILEKLCGILSSEDEVPSS 269
Query: 314 LRNTTKQLNRLHDSMKFCL---ENLGVCGAL-HASYILLSGDETMRNELIEAEGNTIDDS 369
+ +KQL + M+ + LG+ A + ++ E+MR + AE I +
Sbjct: 270 SKMKSKQLKHIRRFMQTSESINQELGIWAATEYMRKSIMHFKESMR---MGAEKTNISNY 326
Query: 370 LCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIV 429
FA + I R G D C ++ S L+ LS ++ +V
Sbjct: 327 GKDFAME-------ILTRLGKLQD--CSPAIQPEEISPMCQCLLDELSK-AYREGFCGLV 376
Query: 430 FVNRIVTARALSYILQNLKFLAS-WRCHFLVGVNAGLKSMS--------RNAMKSILEKF 480
FV + T AL ++++N + + C +G++ S + RN ++ LEKF
Sbjct: 377 FVTQRATVLALKWLIENHPLTSHLFTCGTFIGMSTTQYSKTELGNLHDIRNQTET-LEKF 435
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV--DS 538
R G LNL++ T EEG+D+ C V+ F+ ++ SFIQ RGRAR S++ ++ +S
Sbjct: 436 RQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRGRARRENSQFIIIMEDES 495
Query: 539 G----NQRELDLIKNFSKEEDRMNREI-MDRTSSDAFTCSEERI---YKVDSSGACISAG 590
G + E++ I+ K ++ R+I + D + ERI +D +GA +
Sbjct: 496 GPRYLKRLEMEEIELVQKLQNAERRQIPANELDFDKY----ERISLSLDIDRTGAQLIMR 551
Query: 591 YGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHII-LPAN---APIHQIVGTPQSS 646
V L+ +CSKLP + + KP F Y + G ++ LP+N + S
Sbjct: 552 EAVGYLYNFCSKLPAQLYVSNKPLFTYERNNYGRFRAVVKLPSNLDPSLQSFSSSRSWSR 611
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSS 689
++ A++DA L+A + L++ G +NDYL+P + + + ++F S
Sbjct: 612 LKYAREDAALQAYKALYQAGLVNDYLVPTQVSDHLEGDIIFRS 654
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 179/439 (40%), Gaps = 80/439 (18%)
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
+ D LP Q+ + PSI H +E ++A L+ LS +
Sbjct: 878 FVDKLPSMFAQVAL------------FTPSISHEVEVYMIAQILRQELSLRSVTPWQ-RI 924
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L A+ + R + L +GDAF+KY LFL H EG L+ + ++++
Sbjct: 925 DLLAIAIRPTSIEHRATFRLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDA 984
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRR-CPRICSKETERTIHSQYDGRAPDDLNAE 1140
L ++ L ++ + + G+R P + S G P A
Sbjct: 985 GLAHAIHQSGLGKFLISKHLN-------GKRWVPPLVS------------GIEPASNEAR 1025
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE-FEASQVTNICIS 1199
R + T+AD+ +A+VGA D G A A + +++ + AS + + S
Sbjct: 1026 QRS------IGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDGTYS 1079
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL--GGCYQRLEFLGDAVLD 1257
AS + +E LLG+ F + L +++ HPS L Y+RL FLG +VL+
Sbjct: 1080 KTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1139
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV------DQS-------------- 1297
+++ SYL+ + P ++ L+S NN +A+ +Q+
Sbjct: 1140 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1199
Query: 1298 ------FYKFLIFDSNVLSETINNYVDYMITPSST--REVKEGPRCP----------KVL 1339
+ FL S+ LS ++++V + E+ E P +VL
Sbjct: 1200 TTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALGDMRVL 1259
Query: 1340 GDLVESSLGAILLDSGFNL 1358
D+++S GA+ +DS L
Sbjct: 1260 SDIIQSIFGAVFIDSQATL 1278
>gi|343176226|gb|AEM00325.1| interferon-induced helicase C domain-containing protein 1 [Gallus
gallus]
Length = 1102
Score = 150 bits (378), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 157/583 (26%), Positives = 266/583 (45%), Gaps = 81/583 (13%)
Query: 17 GTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDK-------DPKQIARKYQLELCKK 69
G + S V + SV+ S G S+ D+ +P R YQ+E+ K
Sbjct: 353 GKNSVISESVAVGDASVSNSNENLGQSSTTSDSGEDEAEGRASPEPDLTLRDYQMEVAKP 412
Query: 70 AME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQQQAKVI 125
A+ ENII+ L TG GKT +AV + + HL +K + S I L V LV+Q +
Sbjct: 413 ALNGENIIICLPTGSGKTRVAVYITKD--HLDKKRKASEQGKVIVLVNKVPLVEQHLR-- 468
Query: 126 EESIGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-----RFIK 176
+E F R + G LK + + + +Y+V++ QIL L + ++
Sbjct: 469 KEFNPFLKRWYQVIGLSGDSELK--ISFPEVVKRYDVIICTAQILENSLLNATEEDESVR 526
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI------------MKVPRIFGMTASP 224
+ +L+I DECHH Q + Y IM+ + K I + P+I G+TASP
Sbjct: 527 LSDFSLIIIDECHHTQKEG--VYNNIMRRYLKEKIKNRKQAKENKPLIPQPQILGLTASP 584
Query: 225 VVGKGASAQANLPKSINSLENLLDA-KVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTS 282
VG GA + + + I + LDA ++ +V E A L++ V P + D
Sbjct: 585 GVG-GARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPF 643
Query: 283 SSYVTCSEQLAEIKR---------------EQYISALSRKL--HDHQSLRNTTKQLNRLH 325
+ E + +I++ EQ++ R+ + + R + L + +
Sbjct: 644 RERII--EIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAAKEEKRKERVCAEHLKKYN 701
Query: 326 DSMKF--CLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA 383
D+++ + + L+ Y L +T AE + ++ L + E
Sbjct: 702 DALQINDTIRMVDAYNHLNNFYKELKRRKT-------AESDDDEEPLVSKQDETDEFLMR 754
Query: 384 ICRRDGIASDLSCIEVLKEPFF-SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARAL- 440
+ A E+ ++P + ++KL++L ++ F + + I+F +A AL
Sbjct: 755 LFH----AKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKTRQSALALY 810
Query: 441 SYILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEG 497
+I+ N KF + HFL+G N+ K M++N + +++KFR G +NLL+AT V EEG
Sbjct: 811 HWIMDNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEG 870
Query: 498 LDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
LDI+ C +VIR+ L + +Q+RGRAR +S YA + SG+
Sbjct: 871 LDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGS 913
>gi|167046024|gb|ABZ10543.1| dicer-like protein C [Trichoplax adhaerens]
Length = 358
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 182/368 (49%), Gaps = 36/368 (9%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
LL+ALT + ++ SLERLE LGD+FLK+ + +LF+ H EG+LT + V N NL
Sbjct: 1 LLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNL 60
Query: 1084 LKLAARNNLQVYIRDQPFDPCQ---FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
LKL + YI +PF+ + + G + K + + S DG
Sbjct: 61 LKLGKSTPICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDK------- 113
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVT---- 1194
+ H K+IADV++A++ A + + + A F+ W+ ++F AS +
Sbjct: 114 ---AVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPD 170
Query: 1195 NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCY---QRLEFL 1251
+ ISS + + ++ LE ++G+ F ++ +++A H S++ Q+LEFL
Sbjct: 171 DDNISSNEINKIYETNNLERLEKVIGYSFQNKLFMIRALTHSSYHHHDIAIESNQKLEFL 230
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GD +L Y+I + ++ +P KP +L D + +VNN+ A + + K++ +S L
Sbjct: 231 GDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQESPDLFR 290
Query: 1312 TINNYV-----DYMI---------TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
I+ + DYMI T + E + PK + D+VE+ +GAI +D+G +
Sbjct: 291 DIDQFAKIITCDYMIDDEMNYNDRTEALFENFTEEVKIPKPVSDVVEALIGAIYIDTGES 350
Query: 1358 LNTVWKIM 1365
+ V K +
Sbjct: 351 IAEVTKAL 358
>gi|346327498|gb|EGX97094.1| RNA helicase/RNAse III, putative [Cordyceps militaris CM01]
Length = 1392
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 190/700 (27%), Positives = 292/700 (41%), Gaps = 110/700 (15%)
Query: 39 GFGAESSVGAQKTDKD-PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA 97
G S+ G T +D P + +R YQLE+ + +++EN+IV + TG GKT IA+L I A
Sbjct: 11 GIPPASADGLDLTMEDAPFRASRAYQLEMLQMSLKENVIVAMDTGSGKTQIAILRIR--A 68
Query: 98 HLIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGSK-RLKSHCDWEKEIDQ 155
L + + FLAPTV L QQ I I +R G W+ +
Sbjct: 69 QLESSSDQKLIWFLAPTVLLCAQQVAAIRMEIPSISIRLIVGNDNVHTWGASTWKSLLSG 128
Query: 156 YEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK------- 208
+ +V Q+LL L H F+K++ H V S HP KIM FY
Sbjct: 129 TQAVVSTYQVLLDALDHAFVKLDA----------HNCVGS-HPGGKIMNHFYHYQTTPQE 177
Query: 209 -PDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSS 266
+ P I G+TA+P S QA++ + LE +LDAK S E+L V
Sbjct: 178 AANSSARPAILGLTATP------SMQAHI-TGVEKLEKVLDAKCVSPSLHREELLRHVKR 230
Query: 267 PVVRVYQYGPVINDTSSSYVTCSEQ---LAEIKREQYISALSRKLHDHQSLRNTTKQLNR 323
P +R+ + + + +T Q +I + Y+ +L + NT + + R
Sbjct: 231 PQLRIIECESTSTEHYTESMTSLRQECVKMDILEDPYVISLRTQ--------NTDRSMRR 282
Query: 324 LHDSM--KFCLENLGVCGALHASYILLSGDETMRNELIEAEGN-TIDDSLCRFASQASEV 380
L M + L V LL+ T+RN L + I S F V
Sbjct: 283 LQRVMAEQKTWSRLQVSS-------LLNRSRTIRNVLGPWAADFYIWRSKHTFLQNLESV 335
Query: 381 FAAICRRDG-----------IASDLSCIEVLKEPF----FSKKLLRLIGILSTFRLQQHM 425
++ DG + D++ +E P S K+ L+ L TF Q +
Sbjct: 336 VPSL---DGWIPEEKLYIARVLQDIAALEPTPRPIGQDSVSDKVHLLLRELLTF--QGDV 390
Query: 426 KCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMK----------- 474
I+FV TA L+ +L+++ + R + +G G S N ++
Sbjct: 391 IGIIFVTERATAAVLAALLRSIPGI---RDRYQIGCMVG---TSNNQLRKRSLYEFFGSN 444
Query: 475 --SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
L +FR G +NLLVAT V EEG+D+ C LVI FD P++ SFIQ RGRARM S
Sbjct: 445 DLQTLHEFREGTINLLVATAVLEEGIDVPACNLVICFDSPQSPKSFIQRRGRARMQDSTL 504
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-------YKVDSSGA 585
+E +I ++ E+ + + D + ER+ ++V +GA
Sbjct: 505 LLF----THKESSIIDEWAVFEEEIQKLCQDSEREHQHLQTLERLDEGIDFCFRVPYTGA 560
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKP----KFYYFDDLGGTICHIILPANAPIH-QIV 640
+ L +C + ++ + +P K D + LPA+ P ++
Sbjct: 561 RLDHDNAKQHLEHFCRVISSRQYTDGRPDYVTKLTEGDHGLAITAQVFLPASLPPKLRVF 620
Query: 641 GTPQSSMEAAK--KDACLKAIEDLHKLGALNDYLLPQEDN 678
+ +S + A KDA +A L G +N LLP E N
Sbjct: 621 QSSRSWLSEANAMKDAAFQAYLALFHAGLVNKNLLPLEIN 660
Score = 103 bits (257), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 199/468 (42%), Gaps = 72/468 (15%)
Query: 929 PKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYFDDLPPELCQLKIIGFSKDIGSSL 986
P++P L R + LH K+ D E+ L ++Y LP + I
Sbjct: 846 PEEPYLNLLRWTRRTDFLHPIKV-DPETQILSQKQYASVLPVSYATMDSIHIKH--ARFG 902
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK-ALTTEKCQERFSLERLEIL 1045
L+PSI+H +E +L+ +L S + + +S LL+ A++ E ERLE L
Sbjct: 903 MLVPSIVHIIETMLIVRQL----SVTLLDPLGISDYFLLRDAISARSAMEPTHYERLEFL 958
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LKY + + EG L++ + + NS L + A L +I PF
Sbjct: 959 GDSILKYCASMQAAVTNLDWSEGYLSKYKERLIANSRLSRAAVETGLSRFILSMPF---- 1014
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ + R H + L +++ S + L K +ADVVEAL+G
Sbjct: 1015 ------------TGQKWRPFHLE------TVLAGKMKPSPKRN-LSTKVLADVVEALIGV 1055
Query: 1166 FIDDSGFKAATAFLKWIGIQVEF-EASQVTNICISSKSFLPLSASLDMATLEILLGHQFL 1224
G L + ++ + S S +++S + LE L+G+ F
Sbjct: 1056 AYTVGGIPKTIQCLSIFITECDWMDPSDCREEFFSCAPSHGVNSSY-LHVLEELVGYSFT 1114
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
+ LLL+A H S+ + G ++RLEF+GD++LDY+I + L + P L Q+ +++
Sbjct: 1115 KKSLLLEATTHASYIGDIFGRSWERLEFIGDSILDYIIVNKLINHTPPLAHSQMHIIKTA 1174
Query: 1283 LVNNQAFANVAVDQ----SFYKFLIFDSNVLSETINNYVDYMITPSST------------ 1326
+VN A +++++ F+ VL+E + + I SS+
Sbjct: 1175 MVNMDFLAFISLEEHELSQTESFVTESGTVLTENKHTALWKFIRHSSSGIGPAQLETAKR 1234
Query: 1327 ---------REVKEGPRCP----------KVLGDLVESSLGAILLDSG 1355
R +++G P K DLVE+ +GA+ +DSG
Sbjct: 1235 HVQFRGAILRAIRDGDHYPWHILIKLHASKFYSDLVEAVVGALWVDSG 1282
>gi|170091728|ref|XP_001877086.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648579|gb|EDR12822.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1358
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 212/504 (42%), Gaps = 98/504 (19%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
L PELC K + + ++L LLPSIM R+++LL+ EL +A F + A + ++L
Sbjct: 783 LIPELCA-KFTLPASTLRTAL-LLPSIMRRIDDLLIVKEL----NARFFDHA-IREDLLH 835
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+L ++ ERLE+LGDAFLKY ++F+ T +EG L R ++N +LL+
Sbjct: 836 VSLCAPSAGLEYNYERLELLGDAFLKYLCTIYVFVAEPTQNEGSLHIARQKLISNKSLLE 895
Query: 1086 LAARNNLQVYIRDQPF-----DPCQFFALGRRCPRICSKETERTIHSQYDG--------- 1131
+ L VYI+ +PF P F R I K E G
Sbjct: 896 NSNLIGLPVYIQAKPFPAKSWQPPNFRLTPRTSKMIVDKSDEEAFTPMILGSEMSSDVVE 955
Query: 1132 ----RAPDDLNAEV-------------------------------RCSKGHHWLHKKTIA 1156
R N V + + WL K +A
Sbjct: 956 GAFTRTSTACNPHVSGVDLAVINETSDVNERDPPFYGKKNKKKARQDEQSSQWLGDKAVA 1015
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEASQVTNICISSKSFLPLSAS 1209
DVVEA++GA G + A K + I + +F + T +S P S S
Sbjct: 1016 DVVEAIIGAAYISGGRETALQVTKALAIPISNINRWSDFGRNVSTPPPDASAKLRPESTS 1075
Query: 1210 LDMATLEILLGHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVY 1268
+E ++GH F LL QA H S Y RLEF+GDA+LD+++ ++++
Sbjct: 1076 ----AIERIIGHNFQRPHLLAQALTHSSMQGHESASYGRLEFIGDAILDFMVIQHIFNRD 1131
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE 1328
L PG LT L+ +V+N A A V V K L+F+S L+ +I Y + + R+
Sbjct: 1132 QTLSPGALTLLKGAMVSNSALAAVCVSSGLRKHLLFESYQLAGSIEVYANEL----KARQ 1187
Query: 1329 VKE----------------GPRCPKVLGDLVESSLGAILLDSGFN-------LNTVWKIM 1365
KE G PK L D+VES +GAI + F N V K
Sbjct: 1188 QKEYLAAEREGRSPGQYWLGIEPPKALSDVVESIIGAIYISDDFTPIGAERLFNNVLK-- 1245
Query: 1366 LSFLDPILKFSNLQLNPIRELLEL 1389
F D + L +P + L EL
Sbjct: 1246 -PFYDKHITLQTLSHHPTKILFEL 1268
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 216/541 (39%), Gaps = 86/541 (15%)
Query: 177 MELIALLIFDECHHAQVKSNH---PYAKIMKDFYKPDIMKV-PRIFGMTASPVVGKGASA 232
M + L+ D + + + +H P ++M +FY+ + PRIF + A P
Sbjct: 1 MPQLHTLMIDHAQNIKDQDSHSPMPIVRVMGEFYQTTVSSFRPRIFALAALP-------N 53
Query: 233 QANLPKSINSLENLLDAKVYSVEDAE--DLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ + LE +LDAKV+ + + + D+ S P V Y +
Sbjct: 54 DLHFDSEMLKLELILDAKVFGMAETKRSDILSLPDRPKELVIMYN------------TAT 101
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
+AE + LS++LH + R + + L +G C L
Sbjct: 102 GIAETR-------LSKQLHQFDPDESIFPSYFR---ASRHALLEVGPCAQDLVWRRALKE 151
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS---DLSCIEVLKEPF-FS 406
ET LI + N++DD +Q+S + A RD + + + ++ + F +
Sbjct: 152 IET----LIPSWYNSMDDDE---ETQSSILRAKQGIRDTLKNWPFTMPNLDPSSKGFNVT 204
Query: 407 KKLLRLIGILSTF-RLQQHMKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVNAG 464
K RL+ IL T + + I+FV + A L + +NL L R L G
Sbjct: 205 HKFRRLVDILMTCGSYGKGFRGIIFVQKRAIALVLVDLFRNLYHELRFIRPCALFG--HS 262
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
R+ + I F +GE NLLVATK E+ L+I +VIR+DL ++ S ++ R
Sbjct: 263 FSDFKRH--QEIFHGFVTGEYNLLVATKSTED-LEIPRASMVIRYDLFDSQTSHAYAKAR 319
Query: 525 ARMPQSEYAFLVDSGNQRE---------------------LDLIKNFSKEEDRMNREIMD 563
+S +V+ GN ++ NF+ R RE ++
Sbjct: 320 TCGRESHLIHMVERGNDMHHHILSHIMNAGADILRWTEALYEMANNFAPVPPRDIRESIN 379
Query: 564 --RTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF--------FNPKP 613
+ SD +EE I +SG I ++++R+ + L F F+ K
Sbjct: 380 PYHSDSDDEDSTEEYITDPTTSGR-IYIQDATTVIYRFTAGLKSTGFRLEDDKSLFDLKE 438
Query: 614 KFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
F +C + LP I I G+P S A++ AC +A +L G L+ ++
Sbjct: 439 IHSGFGTTNTLVCSVTLPGTV-IDNISGSPSLSKSQARRSACFEACRELSNAGLLDYRMV 497
Query: 674 P 674
P
Sbjct: 498 P 498
>gi|257051057|sp|Q8R418.3|DICER_MOUSE RecName: Full=Endoribonuclease Dicer; AltName:
Full=Double-strand-specific ribonuclease mDCR-1
Length = 1916
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 564
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 565 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 616
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 676
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 677 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 736
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 737 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 796
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 797 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 853
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 854 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 905
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 906 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 114/193 (59%), Gaps = 17/193 (8%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T E + ++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 1662 TFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1721
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
PG LTDLRS LVNN FA++AV ++K+ S L I+++V + + + + +
Sbjct: 1722 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDS 1781
Query: 1332 GPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS- 1376
R PK +GD+ ES GAI +DSG +L VW++ + P++ KFS
Sbjct: 1782 ELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSA 1841
Query: 1377 NLQLNPIRELLEL 1389
N+ +P+RELLE+
Sbjct: 1842 NVPRSPVRELLEM 1854
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1251 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1310
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1311 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1370
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1371 VSIFDP 1376
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1696 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1753
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1754 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1801
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1802 MGDIFESLAGAIYMDSGM 1819
>gi|148686840|gb|EDL18787.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 1916
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 564
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 565 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 616
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 676
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 677 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 736
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 737 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 796
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 797 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 853
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 854 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 905
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 906 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1612
Query: 1196 ICISSKS-----------------FLPLSASLDMATLEILLGH--------------QFL 1224
+ S S +P D E L H +F
Sbjct: 1613 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1672
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1673 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1732
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1733 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1792
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1793 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1852
Query: 1388 EL 1389
E+
Sbjct: 1853 EM 1854
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1251 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1310
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1311 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1370
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1371 VSIFDP 1376
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1696 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1753
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1754 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1801
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1802 MGDIFESLAGAIYMDSGM 1819
>gi|22830885|dbj|BAC15765.1| double-strand-specific ribonuclease MDCR [Mus musculus]
Length = 1906
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 494
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 495 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 554
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 555 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDTFPPYVL 606
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 607 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 666
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 667 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 726
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 727 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 786
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 787 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 843
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 844 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 895
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 896 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 944
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 945 TPLSKFPSPECETFAEYYKTKYNLDLTNLNQPLLDVDHASSRLNLLTPRHLNQKGKALPL 1004
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1005 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1061
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 1543 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1602
Query: 1196 ICISSKS-----------------FLPLSASLDMATLEILLGH--------------QFL 1224
+ S S +P D E L H +F
Sbjct: 1603 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1662
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1663 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1722
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1723 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1782
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1783 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1842
Query: 1388 EL 1389
E+
Sbjct: 1843 EM 1844
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 95 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 150
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 151 NGYLSLPDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 206
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 207 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 252
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1241 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1300
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1301 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1360
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1361 VSIFDP 1366
Score = 45.4 bits (106), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1285 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1343
Score = 42.0 bits (97), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1686 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1743
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1744 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1791
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1792 MGDIFESLAGAIYMDSGM 1809
>gi|254281220|ref|NP_001123390.2| endoribonuclease Dicer [Xenopus (Silurana) tropicalis]
gi|238064965|sp|B3DLA6.2|DICER_XENTR RecName: Full=Endoribonuclease Dicer
gi|169261418|gb|ACA52289.1| endoribonuclease [Xenopus (Silurana) tropicalis]
Length = 1893
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 152/301 (50%), Gaps = 64/301 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQV---TNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++V E ++ TN+ +S S+
Sbjct: 1531 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPEVRKLVTNTNVISASSSYQNSTRD 1590
Query: 1204 ---LPLSASLDMAT-----------------------------------LEILLGHQFLH 1225
L + D+++ E + + F +
Sbjct: 1591 NCTLTARTNTDLSSCKGIDYGYLKIPPRCMFEHPDAEKTLDHLISGFENFEKKINYPFKN 1650
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
+ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS L
Sbjct: 1651 KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL 1710
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR--------- 1334
VNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1711 VNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKE 1770
Query: 1335 ----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLE 1388
PK +GD+ ES GAI +DSG +L TVW + + P++ KFS N+ +P+RELLE
Sbjct: 1771 EDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPRSPVRELLE 1830
Query: 1389 L 1389
+
Sbjct: 1831 M 1831
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 169/661 (25%), Positives = 269/661 (40%), Gaps = 113/661 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 436 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEVEFRK 491
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 492 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKGRARAPISNY 551
Query: 533 AFLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------ 576
L DS D IK F EED + +I+ S + C
Sbjct: 552 IMLADS------DKIKAF--EEDLKTYKAIEKILRNKCSKSIDCGNTESEPIVDDDEIFP 603
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICHIILPA 632
+ + D ++ + ++RYC++LP D F PK K F D G + LP
Sbjct: 604 PYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTREFPD-GLYRSTLYLPI 662
Query: 633 NAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPML 686
N+P+ IVG P + A + L + LH++G L+D+L+P + D
Sbjct: 663 NSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMPVGKETVKYEEELDLHDE 722
Query: 687 FSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD-------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 723 EETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQPCYLYVIGMVLTTPLPDELNFRRRK 782
Query: 736 --PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLK 792
P + R FG+ +P + H V + G ++ +L SG + E+ +
Sbjct: 783 LYPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLNLEQLELITR 839
Query: 793 V-------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRC 841
+ IL + EF P D Y +LP+ +S +D+K +
Sbjct: 840 LHQYIFSHILRLEKPALEFKPTVAD--------CAYCVLPLNVVNDSGTLDIDFKFVEDI 891
Query: 842 LSSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKK--WFYLVTNIVF 898
S G P +S P L+ + + ++Y + FY V ++
Sbjct: 892 EKSEARTGIPNTQYSAES-PFIFKLE---DYQDAVIIPRQVIYRNFDQPHRFY-VADVYT 946
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED----- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 947 DLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKAL 1006
Query: 954 --SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
S + + + ++ L PELC + + S + LPSI++RL LL A EL
Sbjct: 1007 PLSSAEKRKAKWESLQNKQILVPELCAIHPVPAS--LWRKAVCLPSILYRLHCLLTAEEL 1064
Query: 1006 K 1006
+
Sbjct: 1065 R 1065
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 112/229 (48%), Gaps = 16/229 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L +G GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNTKRTVFLVNSEK 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC----DWEKEIDQYEVLVMIPQILLYCLYH 172
V QQ + KV + S + K+ C W E + ++VLVM I L L
Sbjct: 95 QVSQQVSAVRTHTDLKVGEY---SDQEKTQCWAKERWYLEFETHQVLVMTCHIFLNVLKS 151
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
+ + I LL+FDECH A +HPY +IMK PRI G+TAS + GK
Sbjct: 152 GNVSLSNINLLVFDECHLA--IQDHPYREIMK--ICESCQPCPRILGLTASILNGK--CD 205
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
+L + I LE +L + + D L+ + S P V GP I+ +
Sbjct: 206 PRDLEEKIQKLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYIDKS 254
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1273 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1332
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + + FDP
Sbjct: 1333 LYRLGKKKGSPSRMVVSIFDP 1353
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1272 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1330
Score = 43.9 bits (102), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1673 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1730
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1731 AISPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1778
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1779 MGDIFESLAGAIYMDSGMSLETVW 1802
>gi|20385913|gb|AAM21495.1|AF430845_1 dicer-like protein [Mus musculus]
Length = 1917
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 446 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 505
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 506 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 565
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 566 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 617
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 618 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 677
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 678 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 737
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR S+ K P L M +PD P +
Sbjct: 738 PGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 797
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG + +QQ E+ ++
Sbjct: 798 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFILSQQMLELITRLHQYI 854
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 855 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 906
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 907 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 955
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 956 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1015
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1016 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1072
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 114/193 (59%), Gaps = 17/193 (8%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T E + ++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 1663 TFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1722
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
PG LTDLRS LVNN FA++AV ++K+ S L I+++V + + + + +
Sbjct: 1723 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDS 1782
Query: 1332 GPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS- 1376
R PK +GD+ ES GAI +DSG +L VW++ + P++ KFS
Sbjct: 1783 ELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSA 1842
Query: 1377 NLQLNPIRELLEL 1389
N+ +P+RELLE+
Sbjct: 1843 NVPRSPVRELLEM 1855
Score = 110 bits (276), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 46 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 105
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 106 QVCQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 161
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 162 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 217
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 218 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 263
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1252 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1311
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1312 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1371
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1372 VSIFDP 1377
Score = 45.4 bits (106), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.0 bits (97), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1697 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1754
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1755 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1802
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1803 MGDIFESLAGAIYMDSGM 1820
>gi|148686841|gb|EDL18788.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Mus musculus]
Length = 1908
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 437 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 496
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 497 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 556
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 557 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 608
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 609 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 668
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 669 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 728
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 729 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 788
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 789 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 845
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 846 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 897
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 898 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 946
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 947 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1006
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1007 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1063
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 1545 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1604
Query: 1196 ICISSKS-----------------FLPLSASLDMATLEILLGH--------------QFL 1224
+ S S +P D E L H +F
Sbjct: 1605 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1664
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1665 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1724
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1725 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1784
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1785 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1844
Query: 1388 EL 1389
E+
Sbjct: 1845 EM 1846
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 37 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 96
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 97 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 152
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 153 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 208
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 209 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 254
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1243 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1302
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1303 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1362
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1363 VSIFDP 1368
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1287 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1345
Score = 42.0 bits (97), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1688 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1745
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1746 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1793
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1794 MGDIFESLAGAIYMDSGM 1811
>gi|119174400|ref|XP_001239561.1| hypothetical protein CIMG_09182 [Coccidioides immitis RS]
Length = 1357
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 208/461 (45%), Gaps = 68/461 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL +KA ++NII L TG GKT IAVLL L H+I KP +
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLL---LKHIIEQELIDRSAEKPHR----- 151
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
+V LV QQA V++ +I +V FCG + L + WE+ + + V+V ++L C
Sbjct: 152 -VDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQC 210
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGK 228
L H F+KME I LLIFDE H+A K +HPYA+I+KDFY D K P+IFGMTASPV
Sbjct: 211 LLHAFVKMENINLLIFDEAHNA--KKDHPYARIVKDFYLKDGNAKRPKIFGMTASPV--- 265
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
A+ ++ K+ +LE LL++++ + + L V P V+ Y +
Sbjct: 266 --DAKMDVVKAARNLETLLNSQIATASNLSLLRQSVPRPNEEVWSYDRL----------- 312
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL- 347
+Q E + ++ LR+ L L F L+ GA A ++
Sbjct: 313 -DQPFETRL-------------YKELRSRFGDLRALEKLFTFSLKASSNLGAWCADWVWS 358
Query: 348 --LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ + + E A + + + +E+ + I S ++
Sbjct: 359 YALTEESLPKLEGRAARTAMGNLPIAKIVRPEAEIQRIREASEIIRSHKFGDPAVRPELL 418
Query: 406 SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
S K+ RL +L F KCIVF + TAR L + + H GV G
Sbjct: 419 SPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSRIG-----TKHLRPGVLIG 473
Query: 465 LKSMSRNAMKSILEK-------FRSGELNLLVATKVGEEGL 498
++S + M + FR GE+N L A V +
Sbjct: 474 VRSDASGGMNISFRQQVLAVVSFRKGEVNCLFAHLVERDNF 514
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 115/254 (45%), Gaps = 36/254 (14%)
Query: 1143 CSKGHHWLHKKTIADVVEALVGA--------FIDDSGFKAATAF--------LKWIGIQV 1186
++ H L KTIADV EAL+GA D KA TA L W
Sbjct: 1001 ATENKHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYSR 1060
Query: 1187 EFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG-- 1243
+ + + + A LD+A ++ LG+ F + LL AF HPS+
Sbjct: 1061 LYSIPKYQTAVVDA-------AELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARV 1113
Query: 1244 -CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
CYQRLEFLGDA+LD ++Y +P P LT+ + +V+N+ +VAV + L
Sbjct: 1114 PCYQRLEFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHL 1173
Query: 1303 IFDSNVLSETINNYVDYMIT-------PSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
S L I NYV+ + P + P PK L D+VE+ +GAI +DSG
Sbjct: 1174 NHFSTSLQSQITNYVEEIEAAELESGDPPDAWTLTSDP--PKCLPDMVEAYIGAIFIDSG 1231
Query: 1356 FNLNTVWKIMLSFL 1369
F+ V + FL
Sbjct: 1232 FSFEVVEEFFQKFL 1245
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 187/506 (36%), Gaps = 116/506 (22%)
Query: 615 FYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-- 672
+Y+ +C ++LP +PI IVG P S AK+ A + L K G L+D+
Sbjct: 539 YYHRFTKNAFVCEVVLPEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFVS 598
Query: 673 -----LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNF 727
LP NA + S S+ Y+ M V L ++ ++ P LN
Sbjct: 599 TYHKRLPAMRNA---RLAISSKKSNQYD----------MKVKPKLWET-SRGIIPTSLNI 644
Query: 728 YFMQFIPDPA-DRIYREFGLFVKSLLPGEAE---HLKVDLHLARGRSVMTKLVPSGIMQA 783
+ F P R Y L + LP E +L+ D+ V+ + SG +
Sbjct: 645 VVLGFRPRRLLHREYHPLVLLTREKLPHFPEFPLYLEDDIEC----DVICSSISSGFQVS 700
Query: 784 QQ------------FQEMFLKVI-LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK 830
FQ++F KV D PL C+ SSS LL
Sbjct: 701 SHDLEVLTTFTLRIFQDIFHKVYDRDVGMMTYWLAPLNLS--CDISSSASRDLL------ 752
Query: 831 NSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVE---NSLVYATHK 887
DW I++ +P +P WSS + N VY
Sbjct: 753 ---DWGILQFVFDNP------------EIP----------WSSSNSAAFFANRFVYDRWD 787
Query: 888 -KWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHL-KHPK----------QPLLR 935
++ Y I P S + I Y + L K+ + QP+++
Sbjct: 788 GRYRYFTHGIDPSLRPSDPPPSSMARRRHMGNIMDYCLSLFKNARKKFLENCDWTQPVIK 847
Query: 936 AKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHR 995
A+ + RNLL R + E + +Y+ L P L I + + P+I+ R
Sbjct: 848 AEIIQLRRNLLDKRT--NKEKIKEGDYYICLEP----LTISAIPASVAAFAFAFPAIISR 901
Query: 996 LENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE-------KCQERF-------SLER 1041
+E+ L+A+E L +S E+ L+ALT + + Q+ + ER
Sbjct: 902 IESYLIALEACQELDLP------ISPELALEALTKDSDNTDEHRAQQIHFQRGMGKNYER 955
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDE 1067
LE LGD FLK A LF ++ DE
Sbjct: 956 LEFLGDCFLKMATSISLFAMNPDNDE 981
>gi|117168271|ref|NP_683750.2| endoribonuclease Dicer [Mus musculus]
gi|225000568|gb|AAI72621.1| Dicer1, Dcr-1 homolog (Drosophila) [synthetic construct]
Length = 1906
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 494
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 495 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 554
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 555 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 606
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 607 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 666
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 667 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 726
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 727 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 786
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 787 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 843
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 844 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 895
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 896 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 944
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 945 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1004
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1005 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1061
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 1543 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1602
Query: 1196 ICISSKS-----------------FLPLSASLDMATLEILLGH--------------QFL 1224
+ S S +P D E L H +F
Sbjct: 1603 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1662
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1663 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1722
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1723 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1782
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1783 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1842
Query: 1388 EL 1389
E+
Sbjct: 1843 EM 1844
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 95 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 150
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 151 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 206
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 207 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 252
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1241 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1300
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1301 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1360
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1361 VSIFDP 1366
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1285 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1343
Score = 42.0 bits (97), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1686 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1743
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1744 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1791
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1792 MGDIFESLAGAIYMDSGM 1809
>gi|5019620|dbj|BAA78691.1| helicase-MOI [Homo sapiens]
Length = 1924
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 172/659 (26%), Positives = 276/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G N M++ +
Sbjct: 447 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNNTMEAEFRKQEEV 506
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 507 LRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLA 566
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV------------ 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 567 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDHVFPPYVL 618
Query: 581 --DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 619 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 678
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 679 ASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSV 738
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR S+ + P L M +PD P +
Sbjct: 739 PGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 798
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 799 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQYI 855
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 856 FSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 907
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 908 RIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 956
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 957 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1016
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1017 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1073
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1559 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1618
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1619 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1678
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1679 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1738
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1739 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1798
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1799 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1858
Query: 1386 LLEL 1389
LLE+
Sbjct: 1859 LLEM 1862
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 30/235 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVL------LIYELAHLIRKPQKSICIFLAP 113
RKYQ+EL + A++ N IV L TG GKT IA L +L + K +FL
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIASTTLLKSCLYLDLGETSARNGKRT-VFLVN 103
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLY 168
+ V QQ + KV G L+ + W K E +++VL+M + L
Sbjct: 104 SANQVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALN 159
Query: 169 CLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV----PRIFGMTASP 224
L + ++ + I LL+FDECH A + +HPY + MK + ++ PRI G+TAS
Sbjct: 160 VLKNGYLSLSDINLLVFDECHLAIL--DHPYREFMK------LCEICPSCPRILGLTASI 211
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ GK +L + LE +L + + D L+ + S P V GP +
Sbjct: 212 LNGKWDP--EDLEEKFQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 264
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1298 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1357
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1358 LYRLGKKKGLPSRMVVSIFDP 1378
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1297 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1355
Score = 43.5 bits (101), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1704 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1761
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1762 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1809
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1810 MGDIFESLAGAIYMDSGMSLETVW 1833
>gi|19072786|gb|AAL84638.1|AF484524_1 endoribonuclease Dicer [Mus musculus x Mus spretus]
Length = 1539
Score = 147 bits (372), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 429 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 488
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 489 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 548
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 549 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 600
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 601 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 660
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 661 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 720
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 721 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 780
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 781 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 837
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 838 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 889
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 890 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 938
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 939 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 998
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 999 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1055
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 29 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 88
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 89 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 144
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 145 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 200
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 201 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 246
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1235 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1294
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1295 NLERLEMLGDSFLKHAITTYLFCTYHDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1354
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1355 VSIFDP 1360
Score = 41.2 bits (95), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ Y G+L+ +RS V+N
Sbjct: 1279 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYHDAHEGRLSYMRSKKVSN 1337
>gi|302370918|ref|NP_001180567.1| interferon-induced helicase C domain-containing protein 1 [Gallus
gallus]
gi|302128865|dbj|BAJ14020.1| melanoma differentiation associated protein-5 [Gallus gallus]
Length = 1001
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 153/579 (26%), Positives = 261/579 (45%), Gaps = 73/579 (12%)
Query: 17 GTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDK-------DPKQIARKYQLELCKK 69
G + S V + SV+ S G S+ D+ +P R YQ+E+ K
Sbjct: 252 GKNSVISESVAVGDASVSNSNENLGQSSTTSDSGEDEAEGRASPEPDLTLRDYQMEVAKP 311
Query: 70 AME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQQQAKVI 125
A+ ENII+ L TG GKT +AV + + HL +K + S I L V LV+Q +
Sbjct: 312 ALNGENIIICLPTGSGKTRVAVYITKD--HLDKKRKASEQGKVIVLVNKVPLVEQHLRKE 369
Query: 126 EESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-----RFIKMELI 180
G S + + + + +Y+V++ QIL L + +++
Sbjct: 370 FNPFLKHWYQVIGLSGDSELKISFPEVVKRYDVIICTAQILENSLLNATEEDESVRLSDF 429
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDI------------MKVPRIFGMTASPVVGK 228
+L+I DECHH Q + Y IM+ + K I + P+I G+TASP VG
Sbjct: 430 SLIIIDECHHTQKEG--VYNNIMRRYLKEKIKNRKQAKENKPLIPQPQILGLTASPGVG- 486
Query: 229 GASAQANLPKSINSLENLLDA-KVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
GA + + + I + LDA ++ +V E A L++ V P + D +
Sbjct: 487 GARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPFRERI 546
Query: 287 TCSEQLAEIKR---------------EQYISALSRKL--HDHQSLRNTTKQLNRLHDSMK 329
E + +I++ EQ++ R+ + + R + L + +D+++
Sbjct: 547 I--EIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAAKEEKRKERVCAEHLKKYNDALQ 604
Query: 330 F--CLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR 387
+ + L+ Y L +T AE + ++ L + E +
Sbjct: 605 INDTIRMVDAYNHLNNFYKELKRRKT-------AESDDDEEPLVSKQDETDEFLMRLFH- 656
Query: 388 DGIASDLSCIEVLKEPFF-SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARAL-SYIL 444
A E+ ++P + ++KL++L ++ F + + I+F +A AL +I+
Sbjct: 657 ---AKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKTRQSALALYHWIM 713
Query: 445 QNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
N KF + HFL+G N+ K M++N + +++KFR G +NLL+AT V EEGLDI+
Sbjct: 714 DNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIK 773
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
C +VIR+ L + +Q+RGRAR +S YA + SG+
Sbjct: 774 ECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGS 812
>gi|336468520|gb|EGO56683.1| hypothetical protein NEUTE1DRAFT_123167 [Neurospora tetrasperma
FGSC 2508]
Length = 1529
Score = 147 bits (372), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 179/674 (26%), Positives = 288/674 (42%), Gaps = 126/674 (18%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + ++++NIIV + FL PTVAL
Sbjct: 76 ARAYQLEMFEASLKQNIIV----------------------------ARIWFLTPTVALA 107
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ +V++ I K CG G W+ + ++V QIL H F+
Sbjct: 108 RQQHQVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSFV 167
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASA 232
+++ ++L++ DE H+ +HP A++M + Y P + VP I G+TASP+
Sbjct: 168 RLDSLSLIVIDEAHNC--SGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPL------- 218
Query: 233 QANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYG--------PVINDTSS 283
++N I LE +LDA + E+L + V+ P + V YG P D +
Sbjct: 219 KSNNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSKGPGTEPTPTDLMT 278
Query: 284 SYVTCSEQLAEIK-------REQYISALSRKLHDHQSLRNT--TKQLNRLHDSMKFCLEN 334
++ +L K + Q KL + ++T K+L +++
Sbjct: 279 RFLEAYHRLDISKDPDVLLLKAQRTERAREKLRQMVTKKDTLAQKELRGVYNRALLVRRE 338
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
+G A Y L M EL E + R+ +A +
Sbjct: 339 IGPWAA---DYYLTRTVSHMLAELERGEP----PAQHRYIGEA-------------LRSI 378
Query: 395 SCIEVLKEPF-FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS- 452
+ KEP S K+ L+ +L++ QQ IVFV V +++I+
Sbjct: 379 PIPAISKEPIQLSPKVQTLLKVLASH--QQDPVGIVFVKERVMVSIVTHIISTHPLTKDR 436
Query: 453 WRCHFLVGVNAGLKSMSRNAMK-------SILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
+R ++G A + +RN M + LE FR G NLLVAT V EEG+D+ C L
Sbjct: 437 YRTASMIG-TASVPGKARNHMDMTKKEDMTSLEGFRRGRFNLLVATSVLEEGIDVPICNL 495
Query: 506 VIRFDLPETVASFIQSRGRARMPQSE-YAFLVDSGNQRELD------LIKNFSKEEDRMN 558
VI FD P + SFIQ RGRAR S Y + ++ + +D L+K ++E R N
Sbjct: 496 VICFDEPSNIKSFIQRRGRAREVSSTLYLMVQNASGESAMDWHNLERLMKERYEDEMRQN 555
Query: 559 R--EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK-------LPHDEFF 609
E++D ++ + +V+S+GA ++ S L+ +C+K L + +F
Sbjct: 556 AELELLDDPRIGSYP-----VLEVESTGARMTIRDVRSHLNHFCAKVSSRSRYLQKEPYF 610
Query: 610 -----NPKPKFYYFDDLGGTICHIILPAN-AP---IHQIVGTPQSSMEAAKKDACLKAIE 660
+P P L H LPA+ AP H+ + T +S + A DA +A +
Sbjct: 611 VIRQVSPDPASPGRRTLLQATVH--LPASLAPDLRRHESLWT-WTSEKLAIMDASFQAYK 667
Query: 661 DLHKLGALNDYLLP 674
L+ G +N+ LLP
Sbjct: 668 ALYNAGLVNENLLP 681
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 49/315 (15%)
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH-----LLSASFPEGAEVSAEMLL 1025
Q+++ F +++P+ +E LVA +L + L + P ++
Sbjct: 921 TQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLP--------LIT 972
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYA---VGRHLFLLHDTVD---EGELTRRRSNAVN 1079
AL + + + ERLE +GD LK+ L H V E L++ + VN
Sbjct: 973 TALISSGSRGPTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVN 1032
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
N L + + L YI A + P+ + + ++P+ +A
Sbjct: 1033 NVRLCRASRDFGLDEYI-------IHSAASKKWRPKFVEDYLD-------EMKSPE--SA 1076
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA---TAFLKWIGIQVEFEASQVTNI 1196
E R + K +ADVVE+L+GA G A A L +F+ +++
Sbjct: 1077 ETRQ------MSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEISLS 1130
Query: 1197 CISSKSFLPLSASL--DMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFL 1251
F P A L + LE + + F + LL++A HPS L CY+ LEFL
Sbjct: 1131 RAQLFEFAPKDAILSKQLEPLEKAMSYTFHKKSLLIEAMTHPSCAGLSTNESCYELLEFL 1190
Query: 1252 GDAVLDYLITSYLYS 1266
GDA+LD ++ L +
Sbjct: 1191 GDAILDVIVVKRLMA 1205
Score = 44.3 bits (103), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 1245 YQRLEFLGDAVLDY---LITSYL---YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
Y+RLEF+GD +L + L S L +S+ P L+ + LVNN + D
Sbjct: 986 YERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGL 1045
Query: 1299 YKFLIFDS---NVLSETINNYVDYMITPSS--TREVKEGPRCPKVLGDLVESSLGAILLD 1353
+++I + + + +Y+D M +P S TR++ K++ D+VES +GA +
Sbjct: 1046 DEYIIHSAASKKWRPKFVEDYLDEMKSPESAETRQMSS-----KMVADVVESLIGAAYMC 1100
Query: 1354 SGFN 1357
G +
Sbjct: 1101 GGMS 1104
>gi|332223646|ref|XP_003260983.1| PREDICTED: endoribonuclease Dicer isoform 1 [Nomascus leucogenys]
gi|332223648|ref|XP_003260984.1| PREDICTED: endoribonuclease Dicer isoform 2 [Nomascus leucogenys]
gi|441666339|ref|XP_004091884.1| PREDICTED: endoribonuclease Dicer [Nomascus leucogenys]
Length = 1922
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 151/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1196 ICIS--------SKSF-----------LPLSASLDMATLEILLGH--------------Q 1222
+ +S S+S +P D + L H +
Sbjct: 1617 LSVSCAAPSVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|291191927|gb|ADD83027.1| melanoma differentiation-associated protein 5 [Gallus gallus]
Length = 1001
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 153/579 (26%), Positives = 260/579 (44%), Gaps = 73/579 (12%)
Query: 17 GTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDK-------DPKQIARKYQLELCKK 69
G + S V + SV+ S G S+ D+ +P R YQ+E+ K
Sbjct: 252 GKNSVISESVAVGDASVSNSNENLGQSSTTSDSGEDEAEGRASPEPDLTLRDYQMEVAKP 311
Query: 70 AME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQQQAKVI 125
A+ ENII+ L TG GKT +AV + + HL +K + S I L V LV+Q +
Sbjct: 312 ALNGENIIICLPTGSGKTRVAVYITKD--HLDKKRKASEQGKVIVLVNKVPLVEQHLRKE 369
Query: 126 EESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-----RFIKMELI 180
G S + + + + Y+V++ QIL L + +++
Sbjct: 370 FNPFLKHWYQVIGLSGDSELKISFPEVVKGYDVIICTAQILENSLLNATEEDESVRLSDF 429
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDI------------MKVPRIFGMTASPVVGK 228
+L+I DECHH Q + Y IM+ + K I + P+I G+TASP VG
Sbjct: 430 SLIIIDECHHTQKEG--VYNNIMRRYLKEKIKNRKQAKENKPLIPQPQILGLTASPGVG- 486
Query: 229 GASAQANLPKSINSLENLLDA-KVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
GA + + + I + LDA ++ +V E A L++ V P + D +
Sbjct: 487 GARSNSKAEEHILKICANLDACRIMTVKEHASQLKNQVKEPFKKTVIADDKRRDPFRERI 546
Query: 287 TCSEQLAEIKR---------------EQYISALSRKL--HDHQSLRNTTKQLNRLHDSMK 329
E + +I++ EQ++ R+ + + R + L + +D+++
Sbjct: 547 I--EIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAAKEEKRKERVCAEHLKKYNDALQ 604
Query: 330 F--CLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR 387
+ + L+ Y L +T AE + ++ L + E +
Sbjct: 605 INDTIRMVDAYNHLNNFYKELKRRKT-------AESDDDEEPLVSKQDETDEFLMRLFH- 656
Query: 388 DGIASDLSCIEVLKEPFF-SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARAL-SYIL 444
A E+ ++P + ++KL++L ++ F + + I+F +A AL +I+
Sbjct: 657 ---AKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEEPRGIIFTKTRQSALALYHWIM 713
Query: 445 QNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
N KF + HFL+G N+ K M++N + +++KFR G +NLL+AT V EEGLDI+
Sbjct: 714 DNPKFEEVGIKAHFLIGAGHNSETKPMTQNEQREVIDKFRGGSINLLIATTVAEEGLDIK 773
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
C +VIR+ L + +Q+RGRAR +S YA + SG+
Sbjct: 774 ECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGS 812
>gi|358058780|dbj|GAA95743.1| hypothetical protein E5Q_02400 [Mixia osmundae IAM 14324]
Length = 1610
Score = 147 bits (370), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 127/237 (53%), Gaps = 31/237 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIR------KPQKSICIFLA 112
R+YQ EL +KA + N I+ + TG GKT +AV+LI YE A L R +P + + L
Sbjct: 96 RQYQHELFQKAKQSNTIIRMKTGAGKTLVAVMLILYEAARLRREMMVQERPSRKLLCMLV 155
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYC 169
PTV LV QQ I E +VR F G L S D W+ E D +V+VM PQILL
Sbjct: 156 PTVTLVNQQVAAIREQTSLQVRGFRG--DMLVSAWDLRTWQIEFDLADVVVMTPQILLNV 213
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----------VPRIF 218
L F ++E IALLIFDE HHA+ K HPYA I+ +FY P K +PRI
Sbjct: 214 LRSAFWRIENIALLIFDEAHHARKK--HPYAHILDEFYHPLKRKLARSEAEMSDRLPRIL 271
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQY 274
G+TASPV ++L +I+ LE +DA + V E A +L + P R Y
Sbjct: 272 GLTASPVW-----TASDLVSAISDLERRMDATLVEVKEHAAELAQYNRKPSERCLTY 323
Score = 104 bits (260), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 172/385 (44%), Gaps = 47/385 (12%)
Query: 1019 VSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAV 1078
++ +++ALT S E +E LGD+ LK HL+L + EG LT R+N+V
Sbjct: 1068 IAMHRMIEALTLPGSAVGRSYESIETLGDSVLKVLTSVHLYLAYPLKSEGALTCLRTNSV 1127
Query: 1079 NNSNLLKLAARNNLQVYIRDQ--------PFDPCQFFALGRRCPRICSKETERTIHSQYD 1130
N L A ++L Y+ + P D +G C E ER I
Sbjct: 1128 ENVYLHHKAVESSLGKYLIHERMRLNTWLPRDAEHSADMGDGC------EFERKIQ---- 1177
Query: 1131 GRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA 1190
++ ++D +E+++GA G A + + + A
Sbjct: 1178 ---------------------RRALSDCIESILGAAYLTGGLSMAMDTARAFNLPLGDGA 1216
Query: 1191 SQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLE 1249
S + + + S S + LE L+G+ F + L+QA H S+ + Y+R E
Sbjct: 1217 SWRSRSIEARRR--ERSVSPRIGELEDLVGYSFSNNDCLIQALTHRSYLSPTTPSYEREE 1274
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNV 1308
FLGDA+LD+ + LY+ + + P QL+ LR++LV N VA+ + ++++ +++
Sbjct: 1275 FLGDAMLDFWAITRLYARFDGITPQQLSRLRALLVCNGTLGYVAMLRLRLGEYVLHNADE 1334
Query: 1309 LSET--INNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
++ I + P+ E PKVLGD VE+ GAI +DSG + V+K
Sbjct: 1335 FTDQLEIAQQQAEAMPPAEFCEQVWFWDPPKVLGDCVEAIAGAIFVDSGGDPELVFKYFD 1394
Query: 1367 SFLDPILKF--SNLQLNPIRELLEL 1389
L P++++ N+ +P+ L L
Sbjct: 1395 RILGPLMQYISPNMPADPVSRLAHL 1419
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 152/329 (46%), Gaps = 25/329 (7%)
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK 466
+K+ L+ L T+R + I+FV L I+ +L ++LVG G
Sbjct: 449 QKVRILLDHLETYRACKDFTAIIFVQTRYQTAVLQRIVSKAAWLDFLSTNYLVGSTTGNP 508
Query: 467 S-MSRNAMK-----SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ M++ M+ ++ R G N L AT V EEGLD+ +C L++RFD T+ +IQ
Sbjct: 509 ADMAKGVMRPKQQLKPVQSIREGRCNTLFATSVAEEGLDLSSCNLIVRFDPVSTLVGYIQ 568
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM-----NREIMDRTS-SDAFTCSE 574
SRGRAR S+Y L ++ E D + + E +M R+I + S+ T S
Sbjct: 569 SRGRARAVNSDYLVLAEADTSEEYDW-QTLTASEQQMLDHTGQRDIFEEGELSNGETVSA 627
Query: 575 ERIYKVDSSGACISAGYGVSLLHR-YCSKLPHDEFFNPKPKFYYFD-DLGGTICHIILPA 632
Y V SSGA ++ V L++ + + +P + D G +ILP
Sbjct: 628 TPTYLVPSSGALLTLSSSVMTLNQAFAGQRSEGTQLFKQPIYEIVSTDTGDYAATVILPP 687
Query: 633 NAPIHQ----IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPML 686
+++ I G SS AAK A +A+ L K G +N+ L+P +E+N +
Sbjct: 688 VGTLYEHHRTITGAVASSRSAAKALAAFEAVILLFKAGIINERLVPHYEENNRAATRGVK 747
Query: 687 FSSDS--DSYEGEGSRGELHEMLVPAVLR 713
S D+ D ++ +G + ++ VP +R
Sbjct: 748 TSRDATLDVHDADGRKIDVGA--VPETIR 774
>gi|403274211|ref|XP_003928879.1| PREDICTED: endoribonuclease Dicer isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274213|ref|XP_003928880.1| PREDICTED: endoribonuclease Dicer isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1922
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPAEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDIFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V QQ + KV + GS + W +E +++VL+M + L L +
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSNLEVNGSWTKER---WNQEFTKHQVLIMTCYVALNVLKN 161
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 162 GYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDPE 217
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 218 E--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.5 bits (101), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|296215835|ref|XP_002754306.1| PREDICTED: endoribonuclease Dicer isoform 3 [Callithrix jacchus]
Length = 1922
Score = 146 bits (369), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDIFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNHQQKN 1616
Query: 1204 ---------------------------LPLSASLD--------------MATLEILLGHQ 1222
+P D E + ++
Sbjct: 1617 LSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNYLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V QQ + KV + GS + W +E +++VL+M + L L +
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSNLEVNGSWTKER---WNQEFTKHQVLIMTCYVALNVLKN 161
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 162 GYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDPE 217
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 218 E--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.5 bits (101), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|109478606|ref|XP_001068155.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|109479876|ref|XP_001069041.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|149025439|gb|EDL81806.1| rCG20888 [Rattus norvegicus]
Length = 1918
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 277/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 564
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------IY 578
D+ D IK+F EED + +I+ S + +E +
Sbjct: 565 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDGAEADVHAVVDDDDVFPPYVL 616
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 676
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P + A++ L E LHK+G L+++L+P + D +
Sbjct: 677 ASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 736
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 737 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 796
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 797 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELVTRLHQYI 853
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 854 FSHILRLEKPALEFQPAG--------AESAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 905
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 906 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 1555 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQQKS 1614
Query: 1196 ------ICISSKSF-----------LPLSASLDMATLEILLGHQ--------------FL 1224
+S +S +P D E L H F
Sbjct: 1615 PSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYIFK 1674
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1675 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1734
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1735 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK 1794
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1795 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELL 1854
Query: 1388 EL 1389
E+
Sbjct: 1855 EM 1856
Score = 112 bits (279), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLSPHAKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCDSCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 DE--LEEKIQKLEKILKSGAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKQGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.7 bits (99), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1698 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1755
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1756 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1803
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1804 MGDIFESLAGAIYMDSGM 1821
>gi|21665773|emb|CAB38857.2| hypothetical helicase K12H4.8-like protein [Homo sapiens]
Length = 1912
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 493
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 494 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 553
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 554 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 605
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 606 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 665
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 666 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 725
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 726 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 785
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 786 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 842
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 843 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 894
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 895 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 943
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 944 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1003
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1004 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1061
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1547 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1606
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1607 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1666
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1667 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1726
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1727 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1786
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1787 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1846
Query: 1386 LLEL 1389
LLE+
Sbjct: 1847 LLEM 1850
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 95 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 150
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 151 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 206
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 207 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 252
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1286 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1345
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1346 LYRLGKKKGLPSRMVVSIFDP 1366
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1285 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1343
Score = 43.9 bits (102), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1692 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1749
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1750 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1797
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1798 MGDIFESLAGAIYMDSGMSLETVW 1821
>gi|344274190|ref|XP_003408901.1| PREDICTED: endoribonuclease Dicer [Loxodonta africana]
Length = 1920
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 278/660 (42%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDR-------TSSDAFTCSEE-----------RI 577
D+ D IK+F EED + +++ S+DA E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADAGETDLEPVVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTIAIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 150/306 (49%), Gaps = 71/306 (23%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1555 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRADRENAGRSARENSNSQQKN 1614
Query: 1196 ICISSKSFLPLSASLDMATLEIL-----------------------------------LG 1220
+ +S +P AS + L+ L +
Sbjct: 1615 LSVSCA--VPSGASARTSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKIN 1672
Query: 1221 HQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
+ F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTD
Sbjct: 1673 YSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1732
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR---- 1334
LRS LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1733 LRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEE 1792
Query: 1335 ---------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPI 1383
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+
Sbjct: 1793 DEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLELVWQVYYPMMRPLIEKFSANVPRSPV 1852
Query: 1384 RELLEL 1389
RELLE+
Sbjct: 1853 RELLEM 1858
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDRNTIVCLNTGSGKTFIAVLLTKELSYQIRGEFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKEKWNQEFMKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILQSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1292 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1351
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1352 LYRLGKKKGLPSRMVVSIFDP 1372
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1291 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1349
Score = 42.4 bits (98), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1700 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1757
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1758 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1805
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1806 MGDIFESLAGAIYMDSGM 1823
>gi|444518375|gb|ELV12129.1| Endoribonuclease Dicer [Tupaia chinensis]
Length = 974
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 153/305 (50%), Gaps = 68/305 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ
Sbjct: 608 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGPEKAVCPAQEDSSSQQKA 667
Query: 1196 ICISSKSFLPLSAS-------LDMATLEIL---------------------------LGH 1221
+ +S + P ++S L+ L+I + +
Sbjct: 668 LSVSCAAATPAASSRPAPLKDLEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEKKINY 727
Query: 1222 QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDL
Sbjct: 728 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 787
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR----- 1334
RS LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 788 RSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEED 847
Query: 1335 --------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIR 1384
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+R
Sbjct: 848 EEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVR 907
Query: 1385 ELLEL 1389
ELLE+
Sbjct: 908 ELLEM 912
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 347 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 406
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 407 LYRLGKKKGLPSRMVVSIFDP 427
Score = 45.1 bits (105), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 346 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 404
Score = 44.3 bits (103), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
+ K ++EL + A++ N IV L TG GKT IAVLL EL++ IR
Sbjct: 25 LREKVEVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIR 68
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 754 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 811
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 812 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 859
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 860 MGDIFESLAGAIYMDSGM 877
>gi|198421916|ref|XP_002122382.1| PREDICTED: similar to rCG20888 [Ciona intestinalis]
Length = 2053
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 152/292 (52%), Gaps = 49/292 (16%)
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQV-TNICISSKSFL- 1204
H L K+IAD VEAL+GA++ G ++A L +G+ V + +Q T+ + +L
Sbjct: 1704 QHSLADKSIADCVEALLGAYLTTCGHRSAQLLLCHLGLNVLPKVAQAETSKTVDRFGYLT 1763
Query: 1205 -PLSASLD---------------MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQ 1246
P + L+ ++ E + + F ++ LLQAF H S+ N + CYQ
Sbjct: 1764 PPTNKMLECRPNQQNKLDQLLVALSGFERKINYTFKNKAYLLQAFTHASYYYNTVTDCYQ 1823
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGDAVLD+LIT +L++ PG LTDLRS LVNN FA++AV F+K+ S
Sbjct: 1824 RLEFLGDAVLDFLITRHLFNDERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYFKSIS 1883
Query: 1307 NVLSETINNYVDY----------------------MITPSS-----TREVKEGPRCPKVL 1339
L I ++V Y ++ PSS E PK L
Sbjct: 1884 PELHHIIEDFVMYQQKQEDAQGMDAHLMRDYDRVEIVAPSSLEKDEEEGENEDVEVPKAL 1943
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFSN-LQLNPIRELLEL 1389
GD+ ES GAI +DSG +L++VWK+ + P++ KFS + +P+RELLE+
Sbjct: 1944 GDIFESVAGAIYMDSGMDLSSVWKVYSVMMLPLIEKFSACVPRSPVRELLEM 1995
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 31/273 (11%)
Query: 428 IVFVNRIVTARALSYIL-------QNLKFLASWRCHFLVGVNAGLK-----SMSRNAMKS 475
IVFV A L +L +NLK ++S H GV + SM ++ +
Sbjct: 527 IVFVEERYVAMMLQRLLRELSKEDKNLKHVSS--SHLTPGVEGERRGVDPASMDQSKQEE 584
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFRS E NLL+ T E+ + C L++RFD+P++ S+ +S+ RAR S Y L
Sbjct: 585 VLRKFRSHESNLLICTGDLEDCAYMPKCNLIMRFDVPKSYRSYAESKSRARAQTSAYVML 644
Query: 536 V-DSGNQRELDLIKNFSKEE------DRMNREIMDRTSSDAFTCSEERIYK-VDSSGACI 587
V ++ ++ ++ + K E D E+ D D EE I + + +
Sbjct: 645 VRETEKSHFMEKLQEYKKIEKVLLGPDWSLNEVYDNNEDDDI---EEMIPPYILNRNTQV 701
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT-----ICHIILPANAPIHQIV-G 641
+ V +++RYC++LP D F + P+ + L +C + LP N+ + + V G
Sbjct: 702 NMKNAVRIVNRYCNRLPSDPFTHLSPRCEVVEVLNDGDSPMFMCILQLPINSHVREPVQG 761
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+++ A++ ++ + L++ G L++ L+P
Sbjct: 762 IVMPTLQLAQQAVAMETCKVLYEAGELDENLMP 794
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+AV +L+ + EG+L+ RS V+N N
Sbjct: 1460 LILQALTLSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSNYN 1519
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L ++ + L + FDP
Sbjct: 1520 LYRIGKQFGLAGKMTGLIFDP 1540
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-----AHLIRKPQKSICIFLA 112
I R YQ+EL + A ++N I+ L GK + + + E+ L P+ + L
Sbjct: 25 IPRPYQIELLECAAKQNTIICLNGDFGKCFMYTMFLREVIIKHNGKLNNAPK--FAVLLL 82
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
+V +Q++++ + + + + ++ ++VLV P++ + L
Sbjct: 83 KEDCMVNEQSELLRSHLDVDIISCTHNMTDSFTDESLQQLCHDHQVLVCTPEVFVKLLSI 142
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
+ + L+IFD+CH ++ HP KIMK + P I G+T+S + +
Sbjct: 143 SLYIAQYMDLVIFDDCHLVNIEM-HPIRKIMKIL--DENRYTPMILGLTSSLLNNNITAD 199
Query: 233 QANLPKSINSLENLLDAKVYSVED 256
+ N K I+S+E ++ K + D
Sbjct: 200 ELN--KCIHSMETVMHCKAQTATD 221
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + +T YLY YP+ G+L+ +RS V+N
Sbjct: 1459 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSN 1517
Score = 42.0 bits (97), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERF---SLER 1041
L P+ ++L+ LLVA+ + ++ +F A LL+A T +R
Sbjct: 1770 LECRPNQQNKLDQLLVALSGFERKINYTFKNKA-----YLLQAFTHASYYYNTVTDCYQR 1824
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY---IRD 1098
LE LGDA L + + RHLF G LT RS VNN+ LA + Y I
Sbjct: 1825 LEFLGDAVLDFLITRHLFNDERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYFKSISP 1884
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDG---RAPDDLNAEVRCSKGHHWLHKKTI 1155
+ + F + ++ + ++ + + YD AP L + + K +
Sbjct: 1885 ELHHIIEDFVMYQQ-KQEDAQGMDAHLMRDYDRVEIVAPSSLEKDEEEGENEDVEVPKAL 1943
Query: 1156 ADVVEALVGAFIDDSGFKAATAF 1178
D+ E++ GA DSG ++ +
Sbjct: 1944 GDIFESVAGAIYMDSGMDLSSVW 1966
>gi|410962933|ref|XP_003988023.1| PREDICTED: endoribonuclease Dicer [Felis catus]
Length = 1893
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/663 (25%), Positives = 279/663 (42%), Gaps = 120/663 (18%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 446 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEAEFRK 501
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 502 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNY 561
Query: 533 AFLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------ 576
L D+ D IK+F EED + +I+ S + E
Sbjct: 562 IMLADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDAGETDVEPVVDDDDVFP 613
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPAN 633
+ + D G ++ + ++RYC++LP D F + PK + GT + LP N
Sbjct: 614 PYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPIN 673
Query: 634 APIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLF 687
+P+ IVG P S + A++ L E LHK+G L+D+L+P + D
Sbjct: 674 SPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEE 733
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD--------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 734 ETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKL 793
Query: 736 -PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV 793
P + R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 794 YPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRL 850
Query: 794 -------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCL 842
IL + EF P D + Y +LP+ +S +D+K +
Sbjct: 851 HQYIFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIE 902
Query: 843 SSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNI 896
S G P +++ P L+ D +++++ ++ + FY V ++
Sbjct: 903 KSEARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADV 951
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED--- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 952 YTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGK 1011
Query: 954 ----SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
S + + + ++ L PELC + I S + LPSI++RL LL A
Sbjct: 1012 ALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAE 1069
Query: 1004 ELK 1006
EL+
Sbjct: 1070 ELR 1072
Score = 103 bits (257), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 46 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 105
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V Q + KV G L+ + W K E +++VLVM + L L
Sbjct: 106 QVAPQVSAVRTHSDLKV----GEYSSLEVNAAWTKEKWNQEFTKHQVLVMTCYVALNVLK 161
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 162 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 217
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 218 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 263
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1298 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1357
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1358 LYRLGKKKGLPSRMVVSIFDP 1378
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1776 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1831
Score = 45.4 bits (106), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1297 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1355
>gi|345803797|ref|XP_868526.2| PREDICTED: endoribonuclease Dicer isoform 4 [Canis lupus familiaris]
Length = 1923
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 173/660 (26%), Positives = 276/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDVFPPYV 615
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 151/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ N
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKRTDREKTMCPPRENFSSQQKN 1617
Query: 1196 I-----CISSKSFLP-LSASLDMATLEI---------------------------LLGHQ 1222
+ S S P + L+ L+I + ++
Sbjct: 1618 LSGGRAAASVASLRPSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1677
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1678 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1737
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1738 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1797
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1798 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1857
Query: 1386 LLEL 1389
LLE+
Sbjct: 1858 LLEM 1861
Score = 106 bits (265), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKEKWNQEFTKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.4 bits (98), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1703 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1760
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1761 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1808
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1809 MGDIFESLAGAIYMDSGM 1826
>gi|297695799|ref|XP_002825114.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pongo abelii]
gi|297695801|ref|XP_002825115.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pongo abelii]
gi|297695803|ref|XP_002825116.1| PREDICTED: endoribonuclease Dicer isoform 3 [Pongo abelii]
Length = 1922
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|397525875|ref|XP_003832878.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pan paniscus]
gi|397525877|ref|XP_003832879.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pan paniscus]
Length = 1922
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|326920976|ref|XP_003206741.1| PREDICTED: endoribonuclease Dicer-like [Meleagris gallopavo]
Length = 1921
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 151/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEAS-------------- 1191
K+IAD VEAL+G ++ G +AA FL +G++V ++E++
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKSDWESTLCPTGENCNSEQKN 1615
Query: 1192 ----QVTNICISSKSFL-----------PLSASLDMATLEILLGH--------------Q 1222
V+ ++S+ FL P D E L H
Sbjct: 1616 LSPNSVSACIVNSEPFLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYS 1675
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1795
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855
Query: 1386 LLEL 1389
LLE+
Sbjct: 1856 LLEM 1859
Score = 139 bits (350), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 168/659 (25%), Positives = 273/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + +E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTNEMETEPIVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D + ++ + ++RYC++LP D F + PK + T + LP N+P+
Sbjct: 616 LRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTEAD--------SAYCVLPLNVVDDSSTLDIDFKFMEDIEKSE 904
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
+ K +P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARTGIPSTQYTKEMPFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCG-GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ + KV + + W +E +++VLVM + L L + ++
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNGYL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A +HPY +IMK D PRI G+TAS + GK A+
Sbjct: 165 SLSNINLLVFDECHLA--IQDHPYREIMK--ICEDYPSCPRILGLTASILNGKCDPAELE 220
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
+A+ + D L+ + S P V GP + +
Sbjct: 221 EKIKKLEKILKSNAE--TATDLVVLDRYTSQPCEIVVDCGPYTDKS 264
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.7 bits (99), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1807 MGDIFESLAGAIYMDSGM 1824
>gi|114654619|ref|XP_001154369.1| PREDICTED: endoribonuclease Dicer isoform 6 [Pan troglodytes]
gi|410048689|ref|XP_003952618.1| PREDICTED: endoribonuclease Dicer [Pan troglodytes]
gi|410219112|gb|JAA06775.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256210|gb|JAA16072.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256212|gb|JAA16073.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306234|gb|JAA31717.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306236|gb|JAA31718.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351815|gb|JAA42511.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351817|gb|JAA42512.1| dicer 1, ribonuclease type III [Pan troglodytes]
Length = 1922
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEIDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|432096208|gb|ELK27069.1| Endoribonuclease Dicer [Myotis davidii]
Length = 1970
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 276/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 493
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 494 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 553
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 554 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDVFPPYV 605
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 606 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 665
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 666 RASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 725
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 726 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 785
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 786 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 842
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 843 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 894
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 895 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 943
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 944 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1003
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPS+++RL LL A EL+
Sbjct: 1004 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSVLYRLHCLLTAEELR 1061
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDRNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRHGKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC--DWEKEIDQYEVLVMIPQILLYCLYHRF 174
V QQ + KV + + L S W +E +++VL+M + L L + +
Sbjct: 95 QVAQQVSAVRTHSDLKVGEY-AHLEVLASWTKEKWNQEFTKHQVLIMTCYVALIVLKNGY 153
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
+ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK +
Sbjct: 154 LSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDPEE- 208
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
L + I LE +L + + D L+ + S P V GP ++
Sbjct: 209 -LEEKIQKLEKILKSNAETATDLVVLDRYTSQPYEIVVDCGPFMD 252
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 48/215 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------------------------- 1186
K+IAD VEAL+G ++ G +AA FL +G++V
Sbjct: 1545 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTEHEKAMCPARENCSSQQRS 1604
Query: 1187 -------------EFEASQVTNICI-----SSKSFLPLSASLDMATLEILLGHQFLHRGL 1228
E+ ++ C+ + K+ L + + E + ++F ++
Sbjct: 1605 LSGSRAAAAGKDVEYGCLKIPPRCMFDHPDADKTLTHLISGFE--NFEEKINYRFKNKAY 1662
Query: 1229 LLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN
Sbjct: 1663 LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN 1722
Query: 1287 QAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
FA++AV ++K+ S L + I+ +V + +
Sbjct: 1723 TIFASLAVKYDYHKYFKAVSPELFQVIDVFVQFQL 1757
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1286 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1345
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1346 LYRLGKKRGLPSRMVVSIFDP 1366
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 1336 PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1853 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1908
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1285 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1343
>gi|426377909|ref|XP_004055696.1| PREDICTED: endoribonuclease Dicer isoform 1 [Gorilla gorilla gorilla]
gi|426377911|ref|XP_004055697.1| PREDICTED: endoribonuclease Dicer isoform 2 [Gorilla gorilla gorilla]
gi|426377913|ref|XP_004055698.1| PREDICTED: endoribonuclease Dicer isoform 3 [Gorilla gorilla gorilla]
Length = 1922
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNNQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|29294649|ref|NP_085124.2| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|29294651|ref|NP_803187.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|404312696|ref|NP_001258211.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|257051056|sp|Q9UPY3.3|DICER_HUMAN RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with
RNase motif; Short=Helicase MOI
gi|20521696|dbj|BAA76772.2| KIAA0928 protein [Homo sapiens]
gi|119602002|gb|EAW81596.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Homo sapiens]
gi|152012889|gb|AAI50288.1| Dicer 1, ribonuclease type III [Homo sapiens]
gi|307685563|dbj|BAJ20712.1| dicer 1, ribonuclease type III [synthetic construct]
Length = 1922
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|310798327|gb|EFQ33220.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1532
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 122/211 (57%), Gaps = 21/211 (9%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--------QKSIC 108
Q R+YQ+EL ++A +N IV L TG GKT IA LL L H++ K QK I
Sbjct: 111 QTPREYQIELFERAKSKNTIVVLDTGSGKTLIAALL---LRHILEKEIEDRATGQQKRIA 167
Query: 109 IFLAPTVALVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILL 167
FL V+LV QQ V+E ++ V FCG + S W ++ ++ V+V IL
Sbjct: 168 FFLVDKVSLVFQQHAVLECNLEHPVARFCGDMVDEMWSREFWAQKFEENMVIVCTAAILQ 227
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPV 225
CL H +I+ME I LLIFDE HH K NHPYA+I+KDFY +PD K PRI GMTASPV
Sbjct: 228 KCLTHSYIRMEQINLLIFDEAHH--TKKNHPYARIIKDFYIKEPDANKRPRILGMTASPV 285
Query: 226 VGKGASAQANLPKSINSLENLLDAKVYSVED 256
AQ ++ +I LE LL +++ +V +
Sbjct: 286 -----DAQTDIKIAIAQLECLLHSEIATVSE 311
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 212/485 (43%), Gaps = 98/485 (20%)
Query: 989 LPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE--------KCQERF--- 1037
P+I+HR++ +L+A++ L ++ ++ L+A+T + K + F
Sbjct: 1020 FPAIIHRIDAVLIALDACKFLDL------DIRPDLALEAVTKDSDNSDEHGKNKINFQGG 1073
Query: 1038 ---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQV 1094
+ E+LE LGD FLK A LF + +E R + N NL A +L
Sbjct: 1074 MGKNYEQLEFLGDCFLKMATTIALFTQNPEDNEFAYHVERMLLICNQNLFNKAVDRSLPE 1133
Query: 1095 YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKT 1154
Y+R + FD ++ G R R KE LN H L K+
Sbjct: 1134 YVRSKSFDRRSWYPSGLRLIR--GKEGS--------------LN-------HRHALADKS 1170
Query: 1155 IADVVEALVGA----FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASL 1210
IADV EAL+GA + + + F A ++ + V+ + +T+ ++ P +
Sbjct: 1171 IADVCEALIGAAYLSYAETNNFDMA---IRAVTAMVKNKNHLMTSWGDYYTAYTPSAWQS 1227
Query: 1211 DMAT---------LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVLDY 1258
+T ++ LG++F + LL AF HPS+ R YQRLEFLGDA+LD
Sbjct: 1228 GHSTAMQKELARQIKENLGYEFKYPALLRSAFKHPSYPRAYEDLPNYQRLEFLGDALLDM 1287
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV- 1317
+ +L+ +P P LT+ ++ +V+NQ A + V +K ++ L ++V
Sbjct: 1288 VCVDFLFKKFPDADPQWLTEHKTAMVSNQFLACLCVQLGLHKHVLSGHASLLNQTQDFVG 1347
Query: 1318 -----------DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
D + VK+ PK L D+VE+ +GA+ +DSG++ V
Sbjct: 1348 VLECAKQDAAADGTFSQCYWIHVKQA---PKFLSDVVEAYIGALFVDSGYDYGQVRGFFD 1404
Query: 1367 SFLDPILKFSNLQL-------NPIRELLEL------CNSYDLDLQ--FPSLKKGGKFLAE 1411
+ + P F+++ L +P+ L + C + L + PS+++GG
Sbjct: 1405 AHIRPF--FTDMALYDSFASRHPVTNLTRILQDDLGCQEWRLMVSEVAPSVEEGGA---- 1458
Query: 1412 AKVTG 1416
A +TG
Sbjct: 1459 AAITG 1463
Score = 113 bits (283), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 145/287 (50%), Gaps = 21/287 (7%)
Query: 406 SKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVGV-- 461
S K+LRL L F + +CIVFV +TA L+ + QN L+ LVG
Sbjct: 434 SMKVLRLWEELRPRFTSEPKYRCIVFVEMRLTAVLLADLFKQNHIKLSYLNPAVLVGSQS 493
Query: 462 NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
+ GL +MS + +FR E+N L AT+V EEGLDI C L++RFDL ++V +IQS
Sbjct: 494 DTGLANMSFKQQVLTIHRFRHAEVNCLFATQVAEEGLDIPDCNLIMRFDLYKSVIQYIQS 553
Query: 522 RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR---------EIM--DRTSSDAF 570
+GRAR SEY ++ GN R+ ++ + ++ + R +IM D +S
Sbjct: 554 KGRARRQDSEYISFIEGGNGRQARMVLQATYDQSVLRRFCNALPEDKKIMGFDVKASILK 613
Query: 571 TCSEERIYKVDSSGACISAGYGVSLLHRYCSKL--PHDEFFNPKPKFYYFDDLGGT-ICH 627
+ Y + S+GA ++ + +L + + L +DE P+ Y + G T +
Sbjct: 614 GDLHYKSYLIKSTGAVLTWTSSLEVLANFAASLRQSNDEVCAPE---YVVINQGQTFVAE 670
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ LP +PI + G PQS+ +AA+ A + ++L K ++ L P
Sbjct: 671 VQLPERSPIMHVAGFPQSNKQAARCSAAFEMCKELIKKKYIDHNLQP 717
>gi|195996297|ref|XP_002108017.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
gi|190588793|gb|EDV28815.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
Length = 707
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 237/541 (43%), Gaps = 65/541 (12%)
Query: 878 ENSLVYATHK-----KWFYLVTNIVFEKNGYSPYKDSD-SSSHVDHLISSYGIHLKHPKQ 931
EN++V ++ +WF+ V+N+ + + S + + D +S++ ++ Y I ++ Q
Sbjct: 102 ENAMVARNYRGLDTLEWFF-VSNVCSDMSPSSKFTNPDVASTYSEYYKIKYDIDIQDANQ 160
Query: 932 PLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDD-------LPPELCQLKIIGFSKDIGS 984
PLL ++ L N K S +H++ + L PELC + +I ++
Sbjct: 161 PLLEVARFKKMHITLLNAKQSGSITHDIRTLSVNSNSNSIVLIPELCLIHVI--PAELWF 218
Query: 985 SLSLLPSIMHRLENLLVAIELKHLL----------SASFPEGAEVSAE-MLLKALTTEKC 1033
L +++R+E++L+A EL+ LL S + A SA+ LL+A+T
Sbjct: 219 LSQYLALVLYRVESILLAFELRELLRSQANICDIYSVDYLITAVGSAKPCLLEAITLSSA 278
Query: 1034 QERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
Q+ F+LERLE LGD +L Y + L H + E+ R N L +L A +
Sbjct: 279 QDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFRLGAGRRIP 338
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKK 1153
YI PF+ + + P +T +L+ + H L KK
Sbjct: 339 YYIVGCPFNQNKSWV----PPGFVINQT------------VSELSIAMSREYTHQPLTKK 382
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMA 1213
IAD VE L+G G + F++W+G ++ E I S F S
Sbjct: 383 AIADCVEGLIGYLCLVCGRNSVLRFMRWLGFEIS-ECLDGIQELIPSIDFRTNLYSETAN 441
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFNRLGGC-YQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
++E +L + F +R LL+ A H S++ L Y++L FLGD +L Y I +LY+ Y +
Sbjct: 442 SVETILNYSFRNRSLLMLALTHKSYSGLESISYEKLAFLGDTLLIYQICLFLYTQYTDYQ 501
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL-------------------SETI 1313
P L L N+ + VA+ KFL+ S L S T+
Sbjct: 502 PKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADDVQSFSSTV 561
Query: 1314 NNYVDY-MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
+ Y M T ++ PK LGD + + A+ LD+ + +T +I+ S L+PI
Sbjct: 562 QSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDEDTAGRIINSLLNPI 621
Query: 1373 L 1373
Sbjct: 622 F 622
>gi|397615349|gb|EJK63376.1| hypothetical protein THAOC_15968 [Thalassiosira oceanica]
Length = 1692
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 181/710 (25%), Positives = 283/710 (39%), Gaps = 156/710 (21%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL----------------------- 96
R YQ+ L +K N+IV+L TG GKT I+++LI +
Sbjct: 280 RNYQVHLLEKCKRSNVIVHLATGMGKTMISIMLIRDYLSKRQAASDTAPASTIETTLASG 339
Query: 97 --AHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID 154
+ R K +FL P++AL Q + + ++ V T C S D EI
Sbjct: 340 QEGLVSRVYSKRQILFLVPSIALCVQHSDTLRANLNCTVATACHTSSHTARSRD---EIS 396
Query: 155 QYEVLVMIPQILLYCLYH--RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP-DI 211
+ +V+V L H + + + L++ DE H+A K +H YA IMK FY +
Sbjct: 397 RSDVIVATHGTAKDLLQHYPDVLALSNLDLMVIDEAHYAGTK-DHNYATIMKLFYHTLPV 455
Query: 212 MKVPRIFGMTASPVVGKGASAQA-NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVR 270
P + G+TASP++ S A L + LE LD+K++ +
Sbjct: 456 GLRPHVLGLTASPLINAKVSDTAERLQVKLGELERTLDSKLHGFPE-------------- 501
Query: 271 VYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHD------HQSLRNTTKQLNRL 324
+ DT S V + + + S KL + H+S R +QL L
Sbjct: 502 --ELADCRKDTKESIVYF---------DSLLDSFSTKLPEPDMTFLHKSRRKELRQLQAL 550
Query: 325 HDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
D + + ++YI+ E RNE +D S+V +
Sbjct: 551 CDDVGL---------QVTSTYIIALLREIGRNEYDHETIEQFND----LKVYLSQVVIHL 597
Query: 385 CRR--DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSY 442
R+ +G D S ++K+ L+G+L +VFV R +TA ALS+
Sbjct: 598 NRQVDEGDCGDFSG--------HTEKMSTLVGLLVDLLKHDDPVGVVFVERRITAIALSH 649
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKSMSRNA----------------------------MK 474
K L +GV+ S+ RNA ++
Sbjct: 650 YFNQNKPLDH------LGVDIRSDSLVRNASKIFKYLSNSSSHDQQVVDQDFLHQTKRIR 703
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
S++ K R+ E N+L+AT V EEG+D++ C +I FD +T+ S+IQ +GRAR Q+ +
Sbjct: 704 SVINKLRTRETNVLIATSVVEEGVDVEACSFIISFDRMKTIKSYIQMKGRARQKQASFYT 763
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS--------DAFTCSEERIYKVDSSGAC 586
LVD + LDL + K E R++ + ++ D + Y + A
Sbjct: 764 LVDKCESQILDL-PDAQKTEKRIHDFVASSQTAINLSQPLRDPANAYFDSPYSTEEEAAM 822
Query: 587 ISAGYGV-----------SLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH------II 629
Y SLL+RY +P D P + C+ +
Sbjct: 823 HRGKYSTRISFADLQSAKSLLNRYSMSVPID----PSSRSSKEAMTLHMPCYQERENSLS 878
Query: 630 LPANAPIH-QIVGTPQS-SMEAAKKDA---CLKAIEDLHKLGALNDYLLP 674
LP++ P +IV P+ + AK+ L +I LHKLG LND LLP
Sbjct: 879 LPSHLPPEFRIVSLPRELRGQNAKRKMNLLALASIVRLHKLGLLNDRLLP 928
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 153/604 (25%), Positives = 238/604 (39%), Gaps = 97/604 (16%)
Query: 893 VTNIVFEKNG---YSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRL---RNLL 946
V+ IV+ +G + +++ +S + + YG+ P L AK ++ + ++L
Sbjct: 1125 VSYIVYGPSGNLCRDGFPNTEYTSFLHYFSEKYGVTTLCPTSKLFVAKRVWDMPHSHSVL 1184
Query: 947 HNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE-L 1005
E+ +H +LP E+CQ + + S +LLP ++ +E L A +
Sbjct: 1185 GPGAAEEDVAHAANL---ELPAEVCQESPMADPSIVLQS-TLLPQFLYLVERRLTAEAFI 1240
Query: 1006 KHLLSASFPEGAEVSAEMLLKA--------LTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
+H E EV E L +A LTT+ C+ ERLE LGDA LK
Sbjct: 1241 RHC-----QENYEVLGECLSRAGPDSVMEVLTTKTCRMPQDYERLEWLGDAVLKLVQTDS 1295
Query: 1058 LFLLHDT--VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR 1115
L DT + EG L RS +N L ++A + C F CP
Sbjct: 1296 LLQYSDTSYLHEGYLHMLRSVMGSNERLERVA--------------EECGFNHFILSCP- 1340
Query: 1116 ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
++E R S+ R DD + + K ADVVEA++G GF
Sbjct: 1341 -LNREEWRP--SRLQLRKHDDSSTKALPPTPS----GKVCADVVEAILGLIFVQFGFA-- 1391
Query: 1176 TAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD----MATLEILLGHQFLHRGLLLQ 1231
K + + +E + V +S + F SA D +A G LL +
Sbjct: 1392 ----KSVEVSLEIGLTFVNADKLSRRDFW--SALEDDGELLAFATNFTGQPISDPRLLHE 1445
Query: 1232 AFVHPS-FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
A HPS ++ YQ LE+ GDA + ++L+ KL L L S L +NQ+ A
Sbjct: 1446 AVTHPSCVSKPCRSYQTLEWAGDAAVCLAARNWLFHKKEKLSVPTLVVLESTLTSNQSLA 1505
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAI 1350
+ + + + +SE + Y R PKV+ D+VES +GA+
Sbjct: 1506 YIGHLNGVQRII---DHRMSELPGRFESYKF---QLRRGLWATDPPKVIPDVVESLIGAV 1559
Query: 1351 LLDSGFNLN--TVWKIMLSFLDPILKFSNLQL-------NPIRELLEL------------ 1389
+D G ++ LD + K N L +P + L EL
Sbjct: 1560 HVDQGVEAGQEAAAYVLRPLLDSVSKLLNNDLQDWVGVIHPKQHLYELAADFVNIKVIKE 1619
Query: 1390 --CNSYDLD--LQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFS 1445
CNS L + K G ++A + G K + I A A S+ A+ +A +
Sbjct: 1620 DKCNSMYLKDAVNLCGRKDGNGYVA---IVGC-KSIIIGA-AIESSKAGAVNVACALVVE 1674
Query: 1446 KLKA 1449
LKA
Sbjct: 1675 MLKA 1678
>gi|307133775|ref|NP_001182502.1| endoribonuclease Dicer isoform 2 [Homo sapiens]
gi|300517087|gb|ADK25182.1| t-Dicer [Homo sapiens]
Length = 1829
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 171/663 (25%), Positives = 280/663 (42%), Gaps = 120/663 (18%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEAEFRK 500
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 501 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNY 560
Query: 533 AFLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------ 576
L D+ D IK+F EED + +I+ S + E
Sbjct: 561 IMLADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFP 612
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPAN 633
+ + D G ++ + ++RYC++LP D F + PK + GT + LP N
Sbjct: 613 PYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPIN 672
Query: 634 APIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLF 687
+P+ IVG P S + A++ L E LHK+G L+D+L+P + D
Sbjct: 673 SPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEE 732
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD--------- 735
+ G R + + +P LR S+ + P L M +PD
Sbjct: 733 ETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKL 792
Query: 736 -PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV 793
P + R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 793 YPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRL 849
Query: 794 -------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCL 842
IL + EF P D + Y +LP+ +S +D+K +
Sbjct: 850 HQYIFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIE 901
Query: 843 SSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNI 896
S G P +++ P L+ D +++++ ++ + FY V ++
Sbjct: 902 KSEARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADV 950
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED--- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 951 YTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGK 1010
Query: 954 ----SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
S + + + ++ L PELC + I S + LPSI++RL LL A
Sbjct: 1011 ALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAE 1068
Query: 1004 ELK 1006
EL+
Sbjct: 1069 ELR 1071
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 52/221 (23%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
S LVNN FA++AV ++K+ S L I+++V + +
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQL 1777
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
>gi|414453403|gb|AFX00003.1| Dicer [Mnemiopsis leidyi]
Length = 2002
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 198/838 (23%), Positives = 347/838 (41%), Gaps = 181/838 (21%)
Query: 397 IEVLKEPFFSKKLLRLIGILSTFRLQQHM--------KCIVFVNR----IVTARALSYIL 444
IE +E S K L+ + RLQ + + IVF+ R I + L +
Sbjct: 757 IEECREVRMSVKFYELLKYI--LRLQHNSSENGTDAPRIIVFIQRRRVVIAMHKYLCKLR 814
Query: 445 QNLKFLASWRCHFLVGVNAG-----------------LKSMSRNAMKSILEKFRSGELNL 487
+ ++ A+ + +++G G L+++ + +++++ FR G+ N+
Sbjct: 815 KEVEGCANIKACYVLGGTTGSSKDDDESKLSDFEVDYLETIKKQQEQALID-FREGKHNI 873
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRE-LDL 546
L+AT V EEGLDI C +VIR+D P+T +++QSRGRAR +++ F + + E + L
Sbjct: 874 LLATSVVEEGLDIPACNIVIRYDFPQTYRAYVQSRGRARKKPAKFVFFMKETEKNEKMRL 933
Query: 547 IKNFSKEEDRMNREIMD---RTSSDAFTCSEERIY-------KVDSSGACISAGYGVSLL 596
+ +F E + D R +E Y +V+ +GA ++A + L
Sbjct: 934 LGSFHDIEILLREYASDMSPRADHQEDDDDDEFNYNKLIPPLEVEGTGAKVTANLAIQRL 993
Query: 597 HRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIH-QIVGTPQSSMEAAKKDAC 655
+ YCS+LP D++ + P Y +D G I LP P+ I G S+ + AK A
Sbjct: 994 NFYCSQLPKDDYTDVMPSDYTIEDARGFKTTITLPKLCPVKIPIEGQYMSNKKLAKMSAA 1053
Query: 656 LKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQS 715
+K +E L+ L D LLP+ E P+L S+S + ++ L+++
Sbjct: 1054 MKTLEFLYSANELTDTLLPKF-RQKEVNPLLIQSESGRSLTVDQKLKIPSAFWRRDLKEA 1112
Query: 716 WTKSQ-YPVRLNFY-----FMQFIPDPADRIYREFGLFVKSLLPG------EAEHLKVDL 763
K Y +RL+ F ++ D D FG+ K LP V +
Sbjct: 1113 SGKFYLYSIRLHLIPNDPNFDEYFVDGKDHKVACFGILCKERLPQFPLFTVYPRFGSVTV 1172
Query: 764 HLARGRSVMTKLVPSGIMQA-QQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTF-- 820
++ R+V VP ++Q+ FQE +LD + +SS + F
Sbjct: 1173 NIQFERAVT---VPIHVLQSYYWFQEALFTHLLDLNHVT------------KSSDAIFKS 1217
Query: 821 YLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKS----LPSHGPLQLHNGWSSES- 875
Y +LP+ + + ++ S D+KS + S QLH W E+
Sbjct: 1218 YFILPLCWKSKGLQFR----------------SSDKKSCFLDIDSRFIAQLHKQWDYETN 1261
Query: 876 ---------DVE---NSLVYATHKK------------WFYLVTNIVFEKNGYSPY----- 906
D++ +S+++ + K +FY V K+ +P
Sbjct: 1262 RWIFGNMPDDLDKCLDSVIFPAYNKDLRNQCNKNLSGYFY----AVIRKSELTPKDKMRG 1317
Query: 907 ------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE 960
D ++ ++ ++ + + I L HP + LL + + R H L + S +L
Sbjct: 1318 RSVKNPDDLETQTYEEYHYAKHDIKLVHPTKNLLECRNVTR-----HYAFLTEHASKKLN 1372
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
L E+ Q+ + S + S + LPSI+ R+E ++ E L+ + +G +
Sbjct: 1373 RPPMFLIGEIHQVHPMPSS--LWSQATCLPSILWRIETFCLSNE----LTDNVYKGCNLK 1426
Query: 1021 AEML----------------------------------LKALTTEKCQERFSLERLEILG 1046
++L L ++T + C E ++LERLE LG
Sbjct: 1427 IDLLASHESNYFNERTDNLMARLRRDLEYKGDIDWFETLHSITHKSCGEEYNLERLEFLG 1486
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN-NLQVYIRDQPFDP 1103
D FLK+ + + EG L+R RS ++N NL + + L YI ++ DP
Sbjct: 1487 DRFLKFVSTLYYYRTMPDKHEGWLSRYRSEMISNQNLAVRSCKEIELPRYILNKKVDP 1544
Score = 108 bits (269), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 48/284 (16%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEA---------------SQVT 1194
K +AD +EAL+G + G++ L I + Q + EA SQ++
Sbjct: 1647 KDVADSMEALLGLCVARYGYRKGVDLLDRIKVTTFQAQSEAEPDDLNNHLYKQTPPSQIS 1706
Query: 1195 NICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDA 1254
N+ + L S ++ T+E +G++F LL+A H SF + CYQRLEFLGDA
Sbjct: 1707 NLNPVAIR-LARSRCDNLRTVEKAIGYEFKEPLYLLEALTHASFTEIDACYQRLEFLGDA 1765
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS----NVLS 1310
VLD L+ +Y +P+ GQ+TDL S LV N + V +K L++DS NVL+
Sbjct: 1766 VLDVLMVFRIYEDHPEYDQGQMTDLLSSLVCNTTLSKVCTKLQLHKSLLYDSAELFNVLA 1825
Query: 1311 ETINN------------------YVDYM--ITPSSTREV---KEGPRCPKVLGDLVESSL 1347
N +VD + TP + + + PK+LGDLVES +
Sbjct: 1826 GFFMNFEKDQLEQWCKDLSLERVFVDTVDCDTPDKIPILNLDNKVVQAPKLLGDLVESVI 1885
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILK-FS-NLQLNPIRELLEL 1389
GAI LD ++ V++++ + +P FS N+ NP + EL
Sbjct: 1886 GAIYLDCDEDILRVYEVIWPWFEPFYTAFSKNVPKNPKAMINEL 1929
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAH-LIRKPQKSIC-------- 108
+ R YQ+E+ +A +EN IV + TG GKT +AVLLI H ++ P + C
Sbjct: 548 VPRDYQIEMLNRAKKENTIVMMPTGTGKTFVAVLLIKHFIHQVMTDPWRGPCAENSSCGN 607
Query: 109 -------------IFLAPTVALVQQQAKVIEESIGFKVRTFCG---------GSKRLKSH 146
FL V LV QQ +V+E G V + G + LKS
Sbjct: 608 GKCSCGNKSWRRTFFLVNQVTLVSQQKRVLERHTGVAVGEYSGTHNNLCETINAHSLKSL 667
Query: 147 CDWEKEIDQY--EVLVMIPQIL 166
D EK + +++ IP I+
Sbjct: 668 PDEEKSTYNHIKKIVTAIPVII 689
>gi|308237838|ref|NP_001184123.1| endoribonuclease Dicer [Sus scrofa]
gi|307715909|gb|ADN88174.1| dicer [Sus scrofa]
Length = 1915
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 170/663 (25%), Positives = 280/663 (42%), Gaps = 119/663 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS--SNFITGHGIG-KNQPRNKQMEAEFRK 501
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 502 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNY 561
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEER---------------- 576
L D+ D IK+F EED + +++ + + S E
Sbjct: 562 VMLADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVESGETDLEPVVDDDDIFP 613
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPAN 633
+ + D G ++ + ++RYC++LP D F + PK + GT + LP N
Sbjct: 614 PYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPIN 673
Query: 634 APIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLF 687
+P+ IVG P S + A++ L E LHK+G L+D+L+P + D
Sbjct: 674 SPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEE 733
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD--------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 734 ETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKL 793
Query: 736 -PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV 793
P + R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 794 YPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRL 850
Query: 794 -------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCL 842
IL + EF P D + Y +LP+ +S +D+K +
Sbjct: 851 HQYIFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIE 902
Query: 843 SSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNI 896
S G P +++ P L+ D +++++ ++ + FY V ++
Sbjct: 903 KSEARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADV 951
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED--- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 952 YTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGK 1011
Query: 954 ----SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
S + + + ++ L PELC + I S + LPSI++RL LL A
Sbjct: 1012 ALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAE 1069
Query: 1004 ELK 1006
EL+
Sbjct: 1070 ELR 1072
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 148/302 (49%), Gaps = 66/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTN----ICISSKSF----- 1203
K+IAD VEAL+G ++ G +AA FL +G++V A + T+ C + +SF
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKV-LPAVKRTDRAQAACPARESFTSQQK 1611
Query: 1204 -------------------------LPLSASLDMATLEILLGH--------------QFL 1224
+P D + L H F
Sbjct: 1612 TLSGGRPAAGSRSSGLKDLEYGCLKIPPRCMFDHPDADRTLSHLISGFENFERKINYSFK 1671
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1672 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1731
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1732 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK 1791
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1792 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELL 1851
Query: 1388 EL 1389
E+
Sbjct: 1852 EM 1853
Score = 106 bits (265), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKEKWNQEFTKHQVLVMTCSVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLALSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1294 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1353
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1354 LYRLGKKKGLPSRMVVSIFDP 1374
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1293 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1351
Score = 42.0 bits (97), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1695 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1752
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1753 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1800
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1801 MGDIFESLAGAIYMDSGM 1818
>gi|301770225|ref|XP_002920522.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Ailuropoda melanoleuca]
Length = 1931
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 173/660 (26%), Positives = 276/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEPDIEPVVDDDDVFPPYV 615
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 153/315 (48%), Gaps = 81/315 (25%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ N
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQQKN 1617
Query: 1196 ICISSKSFLPLSAS---------LDMATLEI---------------------------LL 1219
+ S S P SA+ L+ L+I +
Sbjct: 1618 L---SGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1674
Query: 1220 GHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LT
Sbjct: 1675 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1734
Query: 1278 DLRSMLVNNQAFANVAV--------DQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV 1329
DLRS LVNN FA++AV ++K+ S L I+++V + + + + +
Sbjct: 1735 DLRSALVNNTIFASLAVXXXXXXXXXXDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 1794
Query: 1330 KEGPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KF 1375
R PK +GD+ ES GAI +DSG +L VW++ + P++ KF
Sbjct: 1795 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKF 1854
Query: 1376 S-NLQLNPIRELLEL 1389
S N+ +P+RELLE+
Sbjct: 1855 SANVPRSPVRELLEM 1869
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRSGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKEKWSQEFMKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
>gi|355778829|gb|EHH63865.1| hypothetical protein EGM_16920 [Macaca fascicularis]
Length = 1910
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 493
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 494 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 553
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D +K+F EED + +I+ S + E +
Sbjct: 554 ADT------DKMKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPYV 605
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 606 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 665
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 666 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 725
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 726 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 785
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 786 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 842
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 843 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 894
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 895 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 943
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 944 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1003
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1004 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1061
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1545 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1604
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1605 LSVSCAAASMASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1664
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1665 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1724
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1725 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1784
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1785 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1844
Query: 1386 LLEL 1389
LLE+
Sbjct: 1845 LLEM 1848
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 95 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 150
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 151 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPACPRILGLTASILNGKCDP 206
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 207 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 257
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1284 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1343
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1344 LYRLGKKKGLPSRMVVSIFDP 1364
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1283 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1341
Score = 43.5 bits (101), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1690 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1747
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1748 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1795
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1796 MGDIFESLAGAIYMDSGMSLETVW 1819
>gi|402877099|ref|XP_003902280.1| PREDICTED: endoribonuclease Dicer isoform 1 [Papio anubis]
gi|402877101|ref|XP_003902281.1| PREDICTED: endoribonuclease Dicer isoform 2 [Papio anubis]
gi|402877103|ref|XP_003902282.1| PREDICTED: endoribonuclease Dicer isoform 3 [Papio anubis]
Length = 1920
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D +K+F EED + +I+ S + E +
Sbjct: 564 ADT------DKMKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1555 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1614
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1615 LSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1674
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1675 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1734
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1735 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1794
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1795 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1854
Query: 1386 LLEL 1389
LLE+
Sbjct: 1855 LLEM 1858
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPACPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1294 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1353
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1354 LYRLGKKKGLPSRMVVSIFDP 1374
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1293 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1351
Score = 43.5 bits (101), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1700 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1757
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1758 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1805
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1806 MGDIFESLAGAIYMDSGMSLETVW 1829
>gi|383872414|ref|NP_001244801.1| endoribonuclease Dicer [Macaca mulatta]
gi|380811118|gb|AFE77434.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811120|gb|AFE77435.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811122|gb|AFE77436.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811124|gb|AFE77437.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|383417045|gb|AFH31736.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
Length = 1920
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D +K+F EED + +I+ S + E +
Sbjct: 564 ADT------DKMKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1555 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1614
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1615 LSVSCAAASMASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1674
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1675 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1734
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1735 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1794
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1795 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1854
Query: 1386 LLEL 1389
LLE+
Sbjct: 1855 LLEM 1858
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPACPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1294 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1353
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1354 LYRLGKKKGLPSRMVVSIFDP 1374
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1293 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1351
Score = 43.5 bits (101), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1700 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1757
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1758 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1805
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1806 MGDIFESLAGAIYMDSGMSLETVW 1829
>gi|431839251|gb|ELK01178.1| Endoribonuclease Dicer [Pteropus alecto]
Length = 1921
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 275/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETEIEPVVDDDDVFPPYV 615
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 150/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++V + T C + +SF
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVVKRTDRETATCPTRESFGSQQKS 1615
Query: 1204 --------------LPLSASLDMATLEI---------------------------LLGHQ 1222
P+ L+ L+I + ++
Sbjct: 1616 LSGGRAAACAASPRSPVFKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1675
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1795
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855
Query: 1386 LLEL 1389
LLE+
Sbjct: 1856 LLEM 1859
Score = 107 bits (268), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 115/228 (50%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI---CIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR + +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDVSRLGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKEKWSQEFAKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP ++
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFMD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1807 MGDIFESLAGAIYMDSGM 1824
>gi|241061224|ref|XP_002408099.1| dicer-1, putative [Ixodes scapularis]
gi|215492368|gb|EEC02009.1| dicer-1, putative [Ixodes scapularis]
Length = 1348
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 150/338 (44%), Gaps = 75/338 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGI---QVEFEASQVTNICISSKSFLPLSAS 1209
K++AD VEAL+GA++ G A +KW+G+ Q + E + F P +
Sbjct: 984 KSVADSVEALIGAYLLVCGPVGALKVMKWMGVRLTQCDLEGGAEGSGVRGFWGFPPPQTA 1043
Query: 1210 L---------DMATL-----------EILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQR 1247
L D+A L E LG+ F+ R LLQA H S+ NRL CYQR
Sbjct: 1044 LLRHVPHPEEDLAALMELMADTVADVERALGYTFVDRSFLLQAVTHASYYRNRLTDCYQR 1103
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGDAV+DYL+T YLY + K PGQLTDLRS LVNN FA++ V + +
Sbjct: 1104 LEFLGDAVIDYLVTRYLYELPRKFNPGQLTDLRSSLVNNTFFASLVVKYGLHGCFKHCNP 1163
Query: 1308 VLSETINNYVDYMIT-----------PSSTRE----------------------VKEGPR 1334
L I +V+Y P RE V E
Sbjct: 1164 SLFSAIGRFVNYQAQAREEEREEGELPDEDREERQEFPDLNAPLDGAEDDTYWKVLERHY 1223
Query: 1335 C-------------PKVLGDLVESSLGAILLDSGFNLNTVWKIMLS-FLDPILKFS-NLQ 1379
C PK LGDL ES +GA+ LD G +L+ VW+I+ F I FS N+
Sbjct: 1224 CHEEECQEPEEVEVPKALGDLFESLMGAVFLDCGMSLDRVWRIIYRMFGQEIESFSQNVP 1283
Query: 1380 LNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
+ P++EL E D L K + VTGK
Sbjct: 1284 VPPVKELTE--RFRDARFGPAELLGNNKVKVQLTVTGK 1319
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 143/300 (47%), Gaps = 32/300 (10%)
Query: 406 SKKLLRLIGILSTFRL-----QQHMKCIVFVNRIVTARAL----SYILQNLKFLASWRCH 456
+ KL +L+ +L FR + IVFV V AR L + + + A R H
Sbjct: 406 TPKLKKLLEVLRVFRPTGPEEDSSLCGIVFVKERVVARVLCAWLGRVAEEVAPYAFVRPH 465
Query: 457 FLVGVNAGL-------KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
F+VG + G+ MS +LE+FR E NLLVAT V EEG+D+ C LV+RF
Sbjct: 466 FVVG-HGGVAGQSTKESGMSFKQQCKVLEQFRRQECNLLVATSVVEEGMDVPKCSLVVRF 524
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDS-------GNQRELDLIKNFSKEEDRMNREIM 562
D P S++QS+GRAR +S Y +V N + ++++ + R + +
Sbjct: 525 DFPPDYRSYVQSKGRARARRSLYLMMVSRDDCQLSCSNLQAYHVVESLLMNKCRERKAPL 584
Query: 563 DRTSSDAFTCSE--ERIYKVDSSGAC-ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF- 618
D +F E V GA I+ + L++RYC KLP D F +P +
Sbjct: 585 DSEVVLSFAVDEMLPPYMPVKRDGAARITMTSAIGLVNRYCVKLPSDIFTRLQPDYTILP 644
Query: 619 ---DDLGGTICHIILPANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+D +C + LP +P+ + I G P + AK A L+ + LH++G L+D LLP
Sbjct: 645 VNREDKEYYVCTVYLPMTSPLKEPIQGQPMETKRYAKMAAALETCKRLHQMGELDDNLLP 704
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 114/263 (43%), Gaps = 57/263 (21%)
Query: 44 SSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP 103
SSV + + +++++EL + A E N IV LGTG GKT IAV+LI E+ IR P
Sbjct: 97 SSVRSTPDNSKLTGTVKRFEVELFEGAKEANTIVCLGTGTGKTFIAVMLIKEMEKDIRVP 156
Query: 104 QK---SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG--------------------- 139
+ FLAPTV LV QQ K I+ V + G
Sbjct: 157 FEEGGKRTFFLAPTVPLVAQQQKAIQAHTSLHVGGYIGDMNVDNWDAARWHKEFVNSQVK 216
Query: 140 ----------SKRLKSHCD-------------------WEKEIDQYEVLVMIPQILLYCL 170
K +++H W KE +VLVM P+I L
Sbjct: 217 LLFLPLVAQQQKAIQAHTSLRVGGYIGDMNVDNWDAARWHKEFVNSQVLVMTPEIFKIIL 276
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA 230
+H F+ + + LLI DECH A VK H Y +IM+ + PR+ G+TAS + K
Sbjct: 277 HHAFLPLSRVNLLILDECHRA-VK-QHTYREIMRCMDVVEQGLCPRVLGLTASVINSKAT 334
Query: 231 SAQANLPKSINSLENLLDAKVYS 253
AQ ++ LE + ++V +
Sbjct: 335 EAQVE--HKMHGLEMAMRSRVLT 355
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGM 220
M P+I L+H F+ + + LLI DECH A VK H Y +IM+ + PR+ G+
Sbjct: 1 MTPEIFKIILHHAFLPLSRVNLLILDECHRA-VK-QHTYREIMRCMDVVEQGLCPRVLGL 58
Query: 221 TASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
TAS + K AQ ++ LE + ++V +V D + S S+P
Sbjct: 59 TASVINSKATEAQVE--HKMHGLEMAMRSRVLTVSDQASMSSVRSTP 103
Score = 45.8 bits (107), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA + Y V R+L+ L + G+LT RS+ VNN+ L + L +
Sbjct: 1102 QRLEFLGDAVIDYLVTRYLYELPRKFNPGQLTDLRSSLVNNTFFASLVVKYGLHGCFKH- 1160
Query: 1100 PFDPCQFFALGR 1111
+P F A+GR
Sbjct: 1161 -CNPSLFSAIGR 1171
>gi|126290301|ref|XP_001367933.1| PREDICTED: endoribonuclease Dicer-like [Monodelphis domestica]
Length = 1923
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 149/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEA----------SQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V ++E SQ N
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWETTLYPSKDNFNSQQKN 1617
Query: 1196 ICISSKSF-------------------LPLSASLDMATLEILLGH--------------Q 1222
+ ++ S +P D E L H
Sbjct: 1618 LSVNYASISVANLQSSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYN 1677
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1678 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1737
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1738 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1797
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1798 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1857
Query: 1386 LLEL 1389
LLE+
Sbjct: 1858 LLEM 1861
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 167/658 (25%), Positives = 272/658 (41%), Gaps = 110/658 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPMEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFS---KEEDRMNREIMDRTSSDAFTCSEER-------------IYK 579
DS D IK+F K + + + ++ S T E + +
Sbjct: 564 ADS------DKIKSFEDDLKTYKAIEKILRNKCSKSVDTGETETEPIVDDDDIFPPYVLR 617
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH- 637
D ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 618 PDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDGTFYSTLYLPINSPLRA 677
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSD 692
IVG + A++ L E LHK+G L+D+L+P + D +
Sbjct: 678 AIVGPQMNCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVP 737
Query: 693 SYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADR 739
G R + + +P LR S+ K P L M +PD P +
Sbjct: 738 GRPGSTKRRQCYPKAIPECLRNSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPED 797
Query: 740 IYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV----- 793
R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 798 TTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIF 854
Query: 794 --ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV- 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 855 SHILRLEKPALEFKPTEAD--------SAYCVLPLNVVNDSSTLDIDFKFMDDIEKSEAR 906
Query: 847 FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKN 901
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 907 IGIPSTQYTKET-PFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDLT 955
Query: 902 GYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------S 954
S + + + ++ + Y + L + QPLL NLL R L S
Sbjct: 956 PLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLS 1015
Query: 955 ESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1016 SAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 121/239 (50%), Gaps = 11/239 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA + KV + + W +E +++VLVM Q+ L L + ++
Sbjct: 105 QVAQQASAVRTHSDLKVGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQVALNVLKNDYL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A + +HPY +IMK D PRI G+TAS + GK A+
Sbjct: 165 SLSNINLLVFDECHLAIL--DHPYREIMK--ICEDCPSCPRILGLTASILNGKCDPAE-- 218
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
L + I LE +L + + D L+ + S P V GP DTS Y ++L E
Sbjct: 219 LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPY-TDTSGLYERLLKELDE 276
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1299 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1358
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1359 LYRLGKKKGLPSRMVVSIFDP 1379
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1298 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1356
Score = 42.4 bits (98), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1703 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1760
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1761 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1808
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1809 MGDIFESLAGAIYMDSGM 1826
>gi|74204500|dbj|BAE23515.1| unnamed protein product [Mus musculus]
Length = 514
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 151 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 210
Query: 1196 ICISSKS-----------------FLPLSASLDMATLEILLGH--------------QFL 1224
+ S S +P D E L H +F
Sbjct: 211 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 270
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 271 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 330
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 331 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 390
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 391 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 450
Query: 1388 EL 1389
E+
Sbjct: 451 EM 452
Score = 42.0 bits (97), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 294 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 351
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 352 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 399
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 400 MGDIFESLAGAIYMDSGM 417
>gi|37360146|dbj|BAC98051.1| mKIAA0928 protein [Mus musculus]
Length = 1475
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 1112 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1171
Query: 1196 ICISSKS-----------------FLPLSASLDMATLEILLGH--------------QFL 1224
+ S S +P D E L H +F
Sbjct: 1172 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1231
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1232 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1291
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1292 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1351
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 1352 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1411
Query: 1388 EL 1389
E+
Sbjct: 1412 EM 1413
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 163/633 (25%), Positives = 267/633 (42%), Gaps = 108/633 (17%)
Query: 450 LASWRCHFLVGVNAGLKSMSRNAMKS-------ILEKFRSGELNLLVATKVGEEGLDIQT 502
LA +F+ G G M++ +L KFR+ E NLL+AT V EEG+DI
Sbjct: 30 LAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPK 89
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED----RMN 558
C LV+RFDLP S++QS+GRAR P S Y L D+ D IK+F EED +
Sbjct: 90 CNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADT------DKIKSF--EEDLKTYKAI 141
Query: 559 REIMDRTSSDAFTCSEERIY--------------KVDSSGACISAGYGVSLLHRYCSKLP 604
+I+ S + +E ++ + D G ++ + ++RYC++LP
Sbjct: 142 EKILRNKCSKSADGAEADVHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLP 201
Query: 605 HDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH-QIVGTPQSSMEAAKKDACLKAIEDL 662
D F + PK + GT + LP N+P+ IVG P S+ A++ L E L
Sbjct: 202 SDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKL 261
Query: 663 HKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWT 717
HK+G L+++L+P + D + G R + + +P LR+S+
Sbjct: 262 HKIGELDEHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYP 321
Query: 718 KSQYPVRLNFYFMQF---IPD----------PADRIYREFGLFVKSLLPGEAEHLKVDLH 764
K P L M +PD P + R FG+ +P + H V +
Sbjct: 322 KPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIP-QIPHFPV--Y 378
Query: 765 LARGR-SVMTKLVPSGIMQAQQFQEMFLKV-------ILDRSEFNSEFVPLGKDDYCESS 816
G ++ +L SG +QQ E+ ++ IL + EF P G
Sbjct: 379 TRSGEVTISIELKKSGFTLSQQMLELITRLHQYIFSHILRLEKPALEFKPTG-------- 430
Query: 817 SSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV-FGTPGGSVDRKSLPSHGPLQLHNGW 871
+ + Y +LP+ +S +D+K + S G P +++ P L+
Sbjct: 431 AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEARIGIPSTKYSKET-PFVFKLE----- 484
Query: 872 SSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHL 926
D +++++ ++ + FY V ++ + S + + + ++ + Y + L
Sbjct: 485 ----DYQDAVIIPRYRNFDQPHRFY-VADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDL 539
Query: 927 KHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELEEYFDDLP------PELCQL 973
+ QPLL NLL R L S + + + ++ L PELC +
Sbjct: 540 TNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAI 599
Query: 974 KIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
I S + LPSI++RL LL A EL+
Sbjct: 600 HPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 630
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 810 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 869
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 870 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 929
Query: 1098 DQPFDP 1103
FDP
Sbjct: 930 VSIFDP 935
Score = 45.4 bits (106), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 854 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 912
Score = 42.0 bits (97), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1255 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1312
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1313 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1360
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1361 MGDIFESLAGAIYMDSGM 1378
>gi|358253873|dbj|GAA53880.1| endoribonuclease Dicer [Clonorchis sinensis]
Length = 2384
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 168/383 (43%), Gaps = 87/383 (22%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT + +LER+E +GD+FLK+ HL+L + EG+L+ RS V NSNL
Sbjct: 1742 VLQALTMSCSNDFINLERMETIGDSFLKFVATVHLYLTYPNAHEGKLSHMRSRVVCNSNL 1801
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFA----LGRRCPRICSKETERTIHS------------ 1127
+L +LQ + F P + + + R PR+ +K ++ S
Sbjct: 1802 YRLGRAKHLQDRMIACKFGPYENWVPPGYVVRHDPRLVTKADHNSLQSPTRQSNKEVNLN 1861
Query: 1128 --------------------------------QYDGRAPDDLNAEVRCSKG----HHWLH 1151
Q+D +P+ + + +
Sbjct: 1862 IWSTDTLMDDEVLLGMKVYTEEIKPIDNFAVSQWDPNSPEVVKTQKSVDHCLVTIQQAIP 1921
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV----EFEASQVTNICISSKSFLPLS 1207
K+IAD VEAL+G ++ G ++A ++W GI + +PL+
Sbjct: 1922 DKSIADCVEALIGCYLTARGERSALRLMRWFGIDCLPGPDVRLRPRGAPWAIPPPLIPLN 1981
Query: 1208 ----ASLDMA-------TLEILLGHQFLHRGLLLQAFVHPSFNRL--------------- 1241
A L+ A LE L ++F LL+QAF HPS+++L
Sbjct: 1982 DPRRAQLEEARLSWRFDELEAKLNYKFRDPTLLIQAFTHPSYHQLRKTLPVNPDDDPFSS 2041
Query: 1242 -----GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
CYQRLEFLGDAVLDY+IT +LY + PG LTDLRS LVNN FA ++V
Sbjct: 2042 TFLTDTDCYQRLEFLGDAVLDYVITRFLYEDSQQHSPGVLTDLRSALVNNNIFAALSVRA 2101
Query: 1297 SFYKFLIFDSNVLSETINNYVDY 1319
++FL S L TI+ +V Y
Sbjct: 2102 GLHQFLRASSPQLLHTIDVFVRY 2124
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 1326 TREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFSN-LQLNPI 1383
T V + PK LGD+ ES GA+ LDS +L+TVW + + + I +++ + +P+
Sbjct: 2246 TNRVSDDVEIPKALGDIFESLAGALFLDSDLSLDTVWTVFYPLMKERIERYTACIPKSPV 2305
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS---ACATNLSRKEAIRI-- 1438
R+LLEL + P G+ A V GK + I A +L+ K A+R+
Sbjct: 2306 RQLLEL-EPEGTKFERPRRTADGRISVCAHVLGKGRFYGIGRNYRLAKSLAAKRALRVLR 2364
Query: 1439 ---ASQQLFSKLKAAGYVP 1454
ASQ + + + G P
Sbjct: 2365 KLYASQSVGADPCSGGDTP 2383
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA--HLIRKP-----QKSI-----CI 109
YQL+L A E N I+ L K+ I + LI E+ HL ++ +K+I C+
Sbjct: 29 YQLDLLDTAYERNTIICLSNELTKSFITLSLIREMGYDHLGKRALYFTQEKNIIETAHCL 88
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
+++V Q K E IG++ DW KE+ ++ V VM P ++
Sbjct: 89 ARHTGLSVVHFQYK--EPFIGWRF-------------SDWTKELSRHHVTVMSPWLIPCV 133
Query: 170 L-------YHRFIKMELIALLIFDECHHAQVKSNHPYAKIM 203
L + F+ +E LL ECHH + HPY ++
Sbjct: 134 LSGSSPDEFQVFL-LENFYLLAVSECHHV-LDPAHPYFQLF 172
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 99/270 (36%), Gaps = 69/270 (25%)
Query: 474 KSILEKFRSGELNLLVATK----VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
+ + KFR G +NLL+AT+ G ++ C LV+ P ++A ++ S+ R+R+
Sbjct: 694 EETISKFRRGSINLLIATQPAVSAAAGGAELPRCNLVVALQPPRSLAEYLSSKARSRLVD 753
Query: 530 --SEYAFLVDS--------------------------GNQRELDLIKNFSKEEDRMNRE- 560
++ +LV+S ++ F K E + R
Sbjct: 754 HGAQVVYLVESYQSDNCGATASVSPDDFGGGLSHTEQKGGESTGILARFQKLEQLLVRNC 813
Query: 561 -----IMDRTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN--- 610
D D I +G + ++++++YC++LP D N
Sbjct: 814 RSYDLFADEHDVDPSVADRLIPPIMPRGPNGPKLLLSKAINVINQYCARLPSDYITNLTP 873
Query: 611 -------PKPKFYYFDDLG--------GTI----------CHIILPANAPIH-QIVGTPQ 644
P+P+ + G G + C + LP N + +I G P
Sbjct: 874 RWRLKSLPQPQTWKPPVQGPGASCGARGEVEAVRKRGLFQCLLRLPINTSVKMEIAGEPM 933
Query: 645 SSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ + AK A L A+ LH G L+ P
Sbjct: 934 ACKKLAKLSAALNAVRALHAAGELDSRWEP 963
>gi|344248388|gb|EGW04492.1| Endoribonuclease Dicer [Cricetulus griseus]
Length = 1907
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 150/303 (49%), Gaps = 66/303 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------EFEASQ-- 1192
K+IAD VEAL+G ++ G +AA FL +G++V F + Q
Sbjct: 1543 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQQKS 1602
Query: 1193 VTNICISSKSFLPLSASLDMA-----------------------------TLEILLGHQF 1223
++ C ++ + SA D+ E + ++F
Sbjct: 1603 LSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYRF 1662
Query: 1224 LHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1663 KNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRS 1722
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1723 ALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEE 1782
Query: 1335 ------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIREL 1386
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+REL
Sbjct: 1783 KEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVREL 1842
Query: 1387 LEL 1389
LE+
Sbjct: 1843 LEM 1845
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 167/659 (25%), Positives = 276/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 494
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 495 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 554
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------IY 578
D+ D I++F EED + +I+ S + +E +
Sbjct: 555 DT------DKIQSF--EEDLKTYKAIEKILRNKCSKSVDGAEADVDAVVDDDDVFPPYVL 606
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 607 RPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTQELPDGTFYSTLYLPINSPLR 666
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P + A++ L E LHK+G L+++L+P + D +
Sbjct: 667 ASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 726
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 727 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 786
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 787 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 843
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+ + S
Sbjct: 844 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSSTLDIDFTFMEDIEKSEA 895
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 896 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 944
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 945 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1004
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1005 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1061
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P+ +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 95 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLK 150
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 151 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 206
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 207 EE--LEEKIQKLEKILKSNAETATDLVVLDRYASQPCEIVVDCGPFTD 252
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M L ++ + SA + + ++L+ALT + F
Sbjct: 1241 TSDGSPAVSTMPAVMSAGRALKDRMDSEQSPSAGYSSRTLGPNPGLILQALTLSNASDGF 1300
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1301 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1360
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1361 VSIFDP 1366
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1285 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1343
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1687 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1744
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1745 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1792
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1793 MGDIFESLAGAIYMDSGM 1810
>gi|395504573|ref|XP_003756622.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer [Sarcophilus
harrisii]
Length = 1924
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 149/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEA----------SQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V ++E SQ N
Sbjct: 1559 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWENTLYPSKDNFNSQQKN 1618
Query: 1196 ICISSKSF-------------------LPLSASLDMATLEILLGH--------------Q 1222
+ ++ S +P D E L H
Sbjct: 1619 LSVNFASISVANLQSSLYKDLEYGCLKIPPRCMFDYPDAEKTLNHLISGFENFEKKINYN 1678
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1679 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1738
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1739 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1798
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1799 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1858
Query: 1386 LLEL 1389
LLE+
Sbjct: 1859 LLEM 1862
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 271/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 446 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 504
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 564
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
DS D IK+F EED + +I+ S + E +
Sbjct: 565 ADS------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETETEPIVDDDDIFPPYV 616
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 LRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELSDGTFYSTLYLPINSPL 676
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S A++ L E LHK+G L+D+L+P + D +
Sbjct: 677 RAAIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 736
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 737 VPGRPGSTKRRQCYPKAIPECLRNSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 796
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 797 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 853
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 854 IFSHILRLEKPALEFKPTEAD--------SAYCVLPLNVVNDSSTLDIDFKFMDDIEKSE 905
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
R +PS + D +++++ ++ + FY V ++ +
Sbjct: 906 A---------RTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYTDL 955
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 956 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1015
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1016 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1072
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 121/239 (50%), Gaps = 11/239 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 46 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNGKRTVFLVNSAN 105
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA + KV + + W +E +++VLVM Q+ L L + ++
Sbjct: 106 QVAQQASAVRTHSDLKVGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQVALNVLKNDYL 165
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A + +HPY +IMK D PRI G+TAS + GK A+
Sbjct: 166 SLSNINLLVFDECHLAIL--DHPYREIMK--ICEDYPSCPRILGLTASILNGKCDPAE-- 219
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
L + I LE +L + + D L+ + S P V GP DTS Y ++L E
Sbjct: 220 LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPY-TDTSGLYERLLKELDE 277
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1300 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1359
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1360 LYRLGKKKGLPSRMVVSIFDP 1380
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1299 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1357
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1704 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1761
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1762 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1809
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1810 MGDIFESLAGAIYMDSGM 1827
>gi|409050172|gb|EKM59649.1| hypothetical protein PHACADRAFT_114689 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1230
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 203/457 (44%), Gaps = 53/457 (11%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK-HLLSASFPEGAEVSAEML 1024
L PELC +I S I ++ LLPSI H ++ +L+ E++ + + S EG L
Sbjct: 708 LVPELCYKFVIPAS--IWRTVLLLPSITHMIDRMLLVKEMRVAVFNQSIGEGD------L 759
Query: 1025 LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
+A+T ERLE+LGDA LK + + F T EG L+ R V+N L
Sbjct: 760 FQAVTPVSANVEKDYERLELLGDALLKDILSTYFFATMPTKREGALSSARGQVVSNKMLH 819
Query: 1085 KLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD---GRAPDDLNAEV 1141
+ A + +I+ +P + P + +++ + + D G+ L
Sbjct: 820 QNAMAAGMPPWIQSKPL------VVKLWTPYLVARQDAGDVGTSNDHRRGKRQKQLE--- 870
Query: 1142 RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEASQVT 1194
+ WL KT+ADVVEA+VGA G +K + + +F
Sbjct: 871 --EQDVQWLGDKTVADVVEAVVGAAFHQGGTDNVLRTMKILQFNMPEIAEHSDFWRVYAP 928
Query: 1195 NICISSKSF--LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFL 1251
N S K+F LP+ S +E + G +F +L +A H S N+ Y RLEFL
Sbjct: 929 N-APSHKTFCDLPVGTS---EAVEAITGFKFHTPAILAEALTHGSISNQHMTSYDRLEFL 984
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GD +LD I Y++ YPKL PG L+ L++ +V+N A VAV+ Y+ + + S +
Sbjct: 985 GDGILDSNIVWYIFKAYPKLSPGGLSLLKAAMVSNLTLAAVAVESGLYEHVRYCSKEIMS 1044
Query: 1312 TINNYVDYMIT--PSSTREVKEGPR----------CPKVLGDLVESSLGAILLDSGFNLN 1359
+ YV + T R+ + R PK L DLVE+ +GAI + F
Sbjct: 1045 AVKLYVQKIFTLRDQEYRDAEAESRLPNQFWLEVDAPKPLADLVEAIVGAIYVSDRFGTQ 1104
Query: 1360 TV----WKIMLSFLDPILKFSNLQLNPIRELLELCNS 1392
V K++ F D ++ L +P L E +
Sbjct: 1105 GVKTFFQKVLRPFYDRHIRLHTLAPHPGTSLFEFLQA 1141
Score = 41.2 bits (95), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 26/291 (8%)
Query: 406 SKKLLRLIGILSTFRLQQH-MKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
S + +L+ +L + + +C++ V + VTA L+ +L+ L + +
Sbjct: 140 SSQFAKLVDVLQSSETHSNSFRCVIMVKQSVTAVVLAILLRLLDDTLPHVRPVALTTSGT 199
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD-LPETVASFIQSRG 523
L S N ++L F SG NLL+ K+ E+ LD+ +I F+ L E AS +
Sbjct: 200 LSSPQDNV--TLLHSFSSGTHNLLITNKLSEK-LDLCPVTKIIHFNLLEEGPASLLARAL 256
Query: 524 RARMPQSEYAFLVDSGNQRELDLIKN------FSKEEDRMNREIMDRTSSDAFTCSEERI 577
R ++ D N +++K+ + E + + + + + I
Sbjct: 257 TDRNSALHVVYMADQSNDLHKNILKHCGITNQHTPEASGTSSTVQNPPDTSMLLDEDNSI 316
Query: 578 YKVD--SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPK-------FYYFDDLGGTICHI 628
V+ ++G I+A + RY L + F+ + F D + H+
Sbjct: 317 DFVEEPTTGKKINAELAPVAIERYLGSL--RDMFSEDCRASTSWCELEPFQD-NNLVLHL 373
Query: 629 ILPANAPIHQIVGTPQS-SMEAAKKDACLKAIEDLHKLGALND--YLLPQE 676
LP PI + + ++ S + A CL + L K G L D + P+E
Sbjct: 374 SLPDTLPIPEPLRRLETQSPQGATAQLCLSTCKQLFKAGFLRDEFFFTPRE 424
>gi|346716367|ref|NP_001231198.1| endoribonuclease Dicer [Cricetulus griseus]
gi|257051055|sp|A0MQH0.3|DICER_CRIGR RecName: Full=Endoribonuclease Dicer
gi|116831677|gb|ABK28790.1| DICER [Cricetulus griseus]
Length = 1917
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 150/303 (49%), Gaps = 66/303 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------EFEASQ-- 1192
K+IAD VEAL+G ++ G +AA FL +G++V F + Q
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQQKS 1612
Query: 1193 VTNICISSKSFLPLSASLDMA-----------------------------TLEILLGHQF 1223
++ C ++ + SA D+ E + ++F
Sbjct: 1613 LSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYRF 1672
Query: 1224 LHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1673 KNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRS 1732
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1733 ALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEE 1792
Query: 1335 ------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIREL 1386
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+REL
Sbjct: 1793 KEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVREL 1852
Query: 1387 LEL 1389
LE+
Sbjct: 1853 LEM 1855
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 167/659 (25%), Positives = 276/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 564
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------IY 578
D+ D I++F EED + +I+ S + +E +
Sbjct: 565 DT------DKIQSF--EEDLKTYKAIEKILRNKCSKSVDGAEADVDAVVDDDDVFPPYVL 616
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 RPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTQELPDGTFYSTLYLPINSPLR 676
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P + A++ L E LHK+G L+++L+P + D +
Sbjct: 677 ASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 736
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 737 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 796
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 797 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 853
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+ + S
Sbjct: 854 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSSTLDIDFTFMEDIEKSEA 905
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 906 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P+ +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYASQPCEIVVDCGPFTD 262
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M L ++ + SA + + ++L+ALT + F
Sbjct: 1251 TSDGSPAVSTMPAVMSAGRALKDRMDSEQSPSAGYSSRTLGPNPGLILQALTLSNASDGF 1310
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1311 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1370
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1371 VSIFDP 1376
Score = 45.1 bits (105), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1697 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1754
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1755 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1802
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1803 MGDIFESLAGAIYMDSGM 1820
>gi|355683929|gb|AER97238.1| dicer 1, ribonuclease type III [Mustela putorius furo]
Length = 560
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 153/307 (49%), Gaps = 73/307 (23%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ N
Sbjct: 196 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIRRTGREKAVGPPRENSSSQQKN 255
Query: 1196 ICISSKSFLPLSAS---------LDMATLEI---------------------------LL 1219
+ S S P SA+ L+ L+I +
Sbjct: 256 L---SGSRAPASAAGSRSSVLRDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 312
Query: 1220 GHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LT
Sbjct: 313 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 372
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR--- 1334
DLRS LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 373 DLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSE 432
Query: 1335 ----------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNP 1382
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P
Sbjct: 433 EDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSP 492
Query: 1383 IRELLEL 1389
+RELLE+
Sbjct: 493 VRELLEM 499
Score = 42.0 bits (97), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 19/137 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 341 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 398
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 399 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 446
Query: 1155 IADVVEALVGAFIDDSG 1171
+ D+ E+L GA DSG
Sbjct: 447 MGDIFESLAGAIYMDSG 463
>gi|395827764|ref|XP_003787065.1| PREDICTED: endoribonuclease Dicer isoform 1 [Otolemur garnettii]
gi|395827766|ref|XP_003787066.1| PREDICTED: endoribonuclease Dicer isoform 2 [Otolemur garnettii]
Length = 1921
Score = 144 bits (362), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 169/663 (25%), Positives = 277/663 (41%), Gaps = 117/663 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 440 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 498
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 499 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 558
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEER------------------- 576
D+ D IK+F EED + +++ + + S E
Sbjct: 559 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVETGETDIDPVVDDDDDDDIFP 610
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPAN 633
+ + D G ++ + ++RYC++LP D F + PK + GT + LP N
Sbjct: 611 PYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPIN 670
Query: 634 APIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLF 687
+P+ I+G P S + A++ L E LHK+G L+D+L+P + D
Sbjct: 671 SPLRASIIGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEE 730
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD--------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 731 ETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKL 790
Query: 736 -PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV 793
P + R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 791 YPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRL 847
Query: 794 -------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCL 842
IL + EF P D + Y +LP+ +S +D+K +
Sbjct: 848 HQYIFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIE 899
Query: 843 SSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNI 896
S G P +++ P L+ D +++++ ++ + FY V ++
Sbjct: 900 KSEARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADV 948
Query: 897 VFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED--- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 949 YTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGK 1008
Query: 954 ----SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
S + + + ++ L PELC + I S + LPSI++RL LL A
Sbjct: 1009 ALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAE 1066
Query: 1004 ELK 1006
EL+
Sbjct: 1067 ELR 1069
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 148/305 (48%), Gaps = 68/305 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1555 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFSSQQKN 1614
Query: 1204 ----------------------------LPLSASLDMATLEILLGH-------------- 1221
+P D + L H
Sbjct: 1615 LSVSCAAAAAVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINY 1674
Query: 1222 QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDL
Sbjct: 1675 RFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDL 1734
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR----- 1334
RS LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1735 RSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEED 1794
Query: 1335 --------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIR 1384
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+R
Sbjct: 1795 EEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVR 1854
Query: 1385 ELLEL 1389
ELLE+
Sbjct: 1855 ELLEM 1859
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + LY L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALYVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLPLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1294 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1353
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1354 LYRLGKKKGLPSRMVVSIFDP 1374
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1293 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1351
Score = 43.9 bits (102), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1807 MGDIFESLAGAIYMDSGMSLETVW 1830
>gi|299754132|ref|XP_002911949.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
gi|298410618|gb|EFI28455.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
Length = 1457
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 130/225 (57%), Gaps = 13/225 (5%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVA 116
++ARKYQ E+ ++A + N+I YL TG GKT I+VLL+ + + K+I IFL P VA
Sbjct: 17 EVARKYQEEIFRQAQKGNVIAYLRTGLGKTLISVLLMRWMCTQEKAKDKAI-IFLVPKVA 75
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFI 175
LV+QQA I + G + G + D W+K ++V V PQ+ L + H
Sbjct: 76 LVEQQANYIHKQTGLRTCKIHGALNLSFADRDGWKKRFADHDVFVTTPQMFLEAITHAVW 135
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-PRIFGMTASPVVGKGASAQA 234
K+E +L+IFDECHHA + NHPY IM+++++ + P+IFGMTASP Q
Sbjct: 136 KIEQCSLIIFDECHHA--RKNHPYNGIMREYFQVQPLNARPKIFGMTASPYWN-----QK 188
Query: 235 NLPKSINSLENLLDAKVYSV-EDAEDLESFVS--SPVVRVYQYGP 276
N S+++LE LDAK+ V E E+L+S S + V+ Y Y P
Sbjct: 189 NPALSLSTLEANLDAKIIGVHEHVEELQSHYSKLNEVIEKYPYPP 233
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 198/428 (46%), Gaps = 38/428 (8%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
LP + C +++ F + ++ +LP++ ++ ++ A + L F + ++L+
Sbjct: 908 LPRDCC--RVLHFPTSLSNTFRVLPALCRKITDIYRARVARIALRLPF-----IEDKILI 960
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
++LT FS +RLE LGDA L+ HLF + EG+LT R V+N LL+
Sbjct: 961 ESLTIPAALLAFSNQRLETLGDAVLQLCTTVHLFNQYPNRHEGQLTTLRRATVSNKFLLQ 1020
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A L+ YI + I S R I + AP VR
Sbjct: 1021 RALEMGLEEYITVE----------------IASVARWRYILGEDADTAPP---RSVRT-- 1059
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
+ ++++ D +EAL+GA G A +G VEF + K
Sbjct: 1060 ---LVPRRSLQDCMEALLGASFLQGGIPMALQAGPSLG--VEFGGPLPWEMRYERKGPAE 1114
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLY 1265
++ + TL+ LG+ F +L++A HPSF G YQRLEFLGDA+LD ++ YLY
Sbjct: 1115 VATTHLFDTLQERLGYTFHSNSILVEAVTHPSFATDGPSYQRLEFLGDAILDLVVVHYLY 1174
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYM--IT 1322
+P+ QL+ LR+ ++ A +A+ + +K L+ ++ L I YV IT
Sbjct: 1175 EKFPEANSHQLSLLRAKVICAPTLAYLAIKELGVHKILLINNMGLYRAIEAYVPVFEDIT 1234
Query: 1323 PSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL-- 1380
PK + D+ ES +GA+L+DSG+N + ++L + +L +L +
Sbjct: 1235 DEEIARSYYKFDPPKAISDVFESLVGAVLVDSGYNYDKTSAVVLDIMSKVLDQLSLDMAK 1294
Query: 1381 NPIRELLE 1388
+P+ LLE
Sbjct: 1295 DPVSLLLE 1302
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 149/294 (50%), Gaps = 33/294 (11%)
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ---NLKFLASWRCHFLVGVN 462
+ KL ++ I+ + L ++ I+FV + TA L+ +L+ LK LA +C +L+G
Sbjct: 368 TPKLRIMVNIIRS-HLANPIQMIIFVEQRQTAACLAQVLEVIPELKGLA--KCGYLMGHG 424
Query: 463 AG----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+ R + ++ FR E+N+L+AT V EEGLD C LVIRFD P+ + +
Sbjct: 425 TAGDITRRDEERKSKADPIKLFREKEINILIATSVAEEGLDFPACELVIRFDPPKHLVGY 484
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRM-----NREIMDRTSSDA---- 569
+QSRGRAR S+Y ++ + +L+ + + E + NR + +R SD
Sbjct: 485 VQSRGRARSKVSKYIVMIQQEDTDQLERYQALQRGELELSKTYHNRTMPERDESDTMYDD 544
Query: 570 ----FTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP-KPKFYYFDDLGGT 624
+E + V S+GA ++ +SL++ C+ +P D F KP+F +G
Sbjct: 545 DTHPMDLAERERFVVPSTGAVLTYDNALSLINHLCALIPRDSFTEAYKPQF-----IGDF 599
Query: 625 ICHIILPANAPIHQ----IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ LPA+ P+ +G P+ S + AK+ +A++ L KL +DYLLP
Sbjct: 600 QSRMRLPASLPLQPRDLVYLGYPKRSKQEAKRSVAFQAVKRLLKLNVFDDYLLP 653
>gi|167046026|gb|ABZ10544.1| dicer-like protein C [Placozoa sp. DMJ-2008]
Length = 352
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 177/360 (49%), Gaps = 36/360 (10%)
Query: 1032 KCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
+ ++ +LE LE LGD+FLK+ + +LF+ H EG+LT + V N NLLKL
Sbjct: 3 EAEDDINLEGLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNLLKLGKSTP 62
Query: 1092 LQVYIRDQPFDPCQ---FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH 1148
+ YI +PF+ + + G + K + + S DG + H
Sbjct: 63 ICEYIIGKPFNLLKNEGWIPPGYKLLSSKVKNLDEKVTSDLDGDK----------AVTHQ 112
Query: 1149 WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--EASQVT----NICISSKS 1202
K+IADV++A++ A + + + A F+ W+ ++F AS + + ISS
Sbjct: 113 KFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDDISSNE 172
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYL 1259
+ + ++ LE ++G+ F ++ +++A H S+ N Q+LEFLGD +L Y+
Sbjct: 173 INEIYEANNLERLEKVIGYSFQNKLFMIRALTHSSYHHHNIAIESNQKLEFLGDTILQYI 232
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV-- 1317
I + ++ +P KP +L D + +VNN+ A++ + K++ +S L IN +V
Sbjct: 233 IARHFFNSHPDAKPAKLHDFQEAIVNNKCLADIGIAIGVSKYIFQESPDLFRDINQFVKI 292
Query: 1318 ---DYMI---------TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
DYMI T + E + PK + D+VE+ +GAI +D+G ++ V K +
Sbjct: 293 ITCDYMIDDEMNYNDRTEALFENFTEEVKIPKPMSDVVEALIGAIYIDTGESIAEVTKAL 352
>gi|256087296|ref|XP_002579808.1| dicer-1 [Schistosoma mansoni]
Length = 2174
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 138/289 (47%), Gaps = 57/289 (19%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD- 1211
K+IAD VEAL+G ++ G ++A ++W GI S + + LP S LD
Sbjct: 1817 KSIADCVEALIGCYLTTRGERSALRLMQWFGIDC-LHKSDNSQPTARAPWSLPKSNYLDT 1875
Query: 1212 ---------------MATLEILLGHQFLHRGLLLQAFVHPSFNRLG-------------- 1242
LE L + F LL+QAF HPS+++L
Sbjct: 1876 DENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNL 1935
Query: 1243 ------GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
CYQRLEFLGDAVLDY+IT +LY + PG LTDLRS LVNN FA +AV
Sbjct: 1936 MFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRI 1995
Query: 1297 SFYKFLIFDSNVLSETI----------NNYVDYMITPSSTREVKEGPRCPKVLGDLVESS 1346
+K+ S L TI NN + +T + + PK L D+ ES
Sbjct: 1996 GLHKYFRASSPQLLHTIDVFVRKSNNANNTIPTNTGHLTTNRLSDDVEIPKALSDIFESL 2055
Query: 1347 LGAILLDSGFNLNTVWKIMLSFLDPILK------FSNLQLNPIRELLEL 1389
GAI LDS F+L+TVW+I PI+K + + +P+R+LLEL
Sbjct: 2056 AGAIFLDSNFSLDTVWQIFY----PIMKERIERYTACIPKSPVRQLLEL 2100
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT + +LER+E +GD+FLK+ V HL+L + EG+L+ RS V NSNL
Sbjct: 1637 ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSNL 1696
Query: 1084 LKLAARNNLQVYIRDQPFDP 1103
+L +LQ + F+P
Sbjct: 1697 YRLGKAKDLQNRMIGCKFEP 1716
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 88/279 (31%)
Query: 477 LEKFRSGELNLLVATK-----VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ-- 529
+ FR G +NLLVAT+ V G ++ C LVI LP ++A ++ S+ R+R+
Sbjct: 632 ITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRLVNYG 691
Query: 530 SEYAFLVDSGN--------------QRELDLIKNFSKEEDRMNREIMDRTSS----DAF- 570
++ +L+D + Q L+ +N SK+ D + +D S D F
Sbjct: 692 AKVIYLMDHDSIEKINNNNNNNVNKQSNLNDKQNRSKQTD--DHSTVDSMYSNHINDQFL 749
Query: 571 ----------------------------TCSEERIYKVDSSGAC---ISAGYGVSLLHRY 599
T ++ + + G C ++++++Y
Sbjct: 750 GNFQQLEQLLLQRCRGYNVFADEHAIDPTVVDKILPPIFPRGPCGPKFCLSKAINIINQY 809
Query: 600 CSKLPHDEFFNPKPKFYY----------------------FDDL--GGTI----CHIILP 631
C++LP D N PK+Y+ DL GT C + LP
Sbjct: 810 CARLPSDYITNLTPKWYWKIFPQPQGFTPSSTGPGSTCGSLKDLQPDGTFNLYQCVLRLP 869
Query: 632 ANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
N+ + + IVG P + AK A AI L+ G ++
Sbjct: 870 INSSVKETIVGEPMVCKKLAKYSAAFNAIHLLYLSGEMD 908
Score = 46.2 bits (108), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 58/151 (38%), Gaps = 18/151 (11%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR-- 1097
+RLE LGDA L Y + R L+ G LT RS VNN+ LA R L Y R
Sbjct: 1945 QRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLHKYFRAS 2004
Query: 1098 -DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
Q F S TI + + L+ +V K ++
Sbjct: 2005 SPQLLHTIDVFVRK-------SNNANNTIPTNTGHLTTNRLSDDVEIPKA--------LS 2049
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVE 1187
D+ E+L GA DS F T + + I E
Sbjct: 2050 DIFESLAGAIFLDSNFSLDTVWQIFYPIMKE 2080
Score = 40.8 bits (94), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 1246 QRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
+R+E +GD+ L +++T +LY YP+ G+L+ LRS +V N
Sbjct: 1653 ERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCN 1693
>gi|194225335|ref|XP_001496219.2| PREDICTED: endoribonuclease Dicer [Equus caballus]
Length = 1785
Score = 143 bits (361), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 276/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 309 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 367
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 368 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 427
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 428 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDVFPPYV 479
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 480 LRPEDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 539
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 540 RASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 599
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 600 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 659
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 660 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 716
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 717 IFSHILRLEKPALEFKPADAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 768
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 769 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 817
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 818 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 877
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 878 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 935
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 146/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C ++F
Sbjct: 1420 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKGLCPPRENFSSQQKN 1479
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1480 LSGGWAAASAASSRSSVCKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1539
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1540 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1599
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1600 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1659
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1660 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1719
Query: 1386 LLEL 1389
LLE+
Sbjct: 1720 LLEM 1723
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1161 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1220
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1221 LYRLGKKKGLPSRMVVSIFDP 1241
Score = 45.1 bits (105), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1160 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1218
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1565 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1622
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1623 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1670
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1671 MGDIFESLAGAIYMDSGM 1688
>gi|348554455|ref|XP_003463041.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Cavia
porcellus]
Length = 1929
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 169/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEADVDPVVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
I+G P S + A++ L E LHK+G L+++L+P + D +
Sbjct: 676 RASIIGPPMSCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPNQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P+ D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPIDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPNTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1564 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGREKALCPARENFSSQQKS 1623
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1624 LSGSCASAAAAGSRSSACKDLEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEKKINYR 1683
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1684 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1743
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1744 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1803
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1804 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1863
Query: 1386 LLEL 1389
LLE+
Sbjct: 1864 LLEM 1867
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVPQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCSVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1709 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1766
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1767 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1814
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1815 MGDIFESLAGAIYMDSGM 1832
>gi|426248555|ref|XP_004018028.1| PREDICTED: endoribonuclease Dicer [Ovis aries]
Length = 1922
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKN 1616
Query: 1196 ICISSKSF-------------------LPLSASLDMATLEILLGH--------------Q 1222
+ S + +P D + L H +
Sbjct: 1617 LSGSRTAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 171/659 (25%), Positives = 276/659 (41%), Gaps = 113/659 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 563
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDR-------TSSDAFTCSEERIYKVDS------ 582
D+ D IK+F EED + +++ S D E + D
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYV 615
Query: 583 ----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 675
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 ASIVGPPMSCIRLAERVVALICCERLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSV 735
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 736 PGRPGSTKRRQCYPKAIPECLRESYPKPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 795
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYI 852
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 FSHILRLEKPALEFKPADAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 904
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 953
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1013
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1070
Score = 103 bits (258), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRSGRRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVTASWTKEKWNQEFTKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D ++ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILRSNAETATDLVVVDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.4 bits (106), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.5 bits (101), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|42733596|ref|NP_976235.1| endoribonuclease Dicer [Bos taurus]
gi|257051053|sp|Q6TUI4.3|DICER_BOVIN RecName: Full=Endoribonuclease Dicer
gi|38679195|gb|AAR26432.1| dicer [Bos taurus]
Length = 1923
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKN 1617
Query: 1196 ICISSKSF-------------------LPLSASLD--------------MATLEILLGHQ 1222
+ S + +P D E + ++
Sbjct: 1618 LSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEKKINYR 1677
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1678 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1737
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1738 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1797
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1798 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1857
Query: 1386 LLEL 1389
LLE+
Sbjct: 1858 LLEM 1861
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 276/659 (41%), Gaps = 113/659 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 563
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDR-------TSSDAFTCSEERIYKVDS------ 582
D+ D IK+F EED + +++ S D E + D
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYV 615
Query: 583 ----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 675
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 ASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSV 735
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ + P L M +PD P +
Sbjct: 736 PGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 795
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYI 852
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 FSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 904
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 953
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1013
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1070
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVSASWTKEKWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGR-HLFLLHDTVDEGELTRRRSNAVNNS 1081
++L+ALT + F+LERLE+LGD+FLK+A+ L L EG L+ RS V+N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNC 1355
Query: 1082 NLLKLAARNNLQVYIRDQPFDP 1103
NL +L + L + FDP
Sbjct: 1356 NLYRLGKKKGLPSRMVVSIFDP 1377
Score = 43.5 bits (101), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1703 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1760
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1761 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1808
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1809 MGDIFESLAGAIYMDSGMSLETVW 1832
>gi|296475171|tpg|DAA17286.1| TPA: endoribonuclease Dicer [Bos taurus]
Length = 1922
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKN 1617
Query: 1196 ICISSKSF-------------------LPLSASLD--------------MATLEILLGHQ 1222
+ S + +P D E + ++
Sbjct: 1618 LSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEKKINYR 1677
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1678 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1737
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1738 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1797
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1798 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1857
Query: 1386 LLEL 1389
LLE+
Sbjct: 1858 LLEM 1861
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 276/659 (41%), Gaps = 113/659 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 563
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDRT-------SSDAFTCSEERIYKVDS------ 582
D+ D IK+F EED + +++ S D E + D
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYV 615
Query: 583 ----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 675
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 ASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSV 735
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ + P L M +PD P +
Sbjct: 736 PGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 795
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYI 852
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 FSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 904
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 953
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1013
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1070
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVSASWTKEKWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGR-HLFLLHDTVDEGELTRRRSNAVNNS 1081
++L+ALT + F+LERLE+LGD+FLK+A+ L L EG L+ RS V+N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNC 1355
Query: 1082 NLLKLAARNNLQVYIRDQPFDP 1103
NL +L + L + FDP
Sbjct: 1356 NLYRLGKKKGLPSRMVVSIFDP 1377
Score = 43.5 bits (101), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1703 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1760
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1761 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1808
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1809 MGDIFESLAGAIYMDSGMSLETVW 1832
>gi|351701180|gb|EHB04099.1| Endoribonuclease Dicer [Heterocephalus glaber]
Length = 1935
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 170/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDVDSVVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTQELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+++L+P + D ++
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETN 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPNQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 149/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------EFEASQ-- 1192
K+IAD VEAL+G ++ G +AA FL +G++V F + Q
Sbjct: 1570 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGREKALCPALENFSSQQKS 1629
Query: 1193 VTNICISSKSF----------------LPLSASLDMATLEILLGH--------------Q 1222
++ C S+ + +P D + L H +
Sbjct: 1630 LSGSCASAVAAGSRSSAWKDLEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEKKINYR 1689
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1690 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1749
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1750 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1809
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1810 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1869
Query: 1386 LLEL 1389
LLE+
Sbjct: 1870 LLEM 1873
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR P +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSPNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E ++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWNQEFTMHQVLIMTCSVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSSPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1715 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1772
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1773 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1820
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1821 MGDIFESLAGAIYMDSGM 1838
>gi|440907259|gb|ELR57423.1| Endoribonuclease Dicer [Bos grunniens mutus]
Length = 1922
Score = 143 bits (360), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKN 1616
Query: 1196 ICISSKSF-------------------LPLSASLD--------------MATLEILLGHQ 1222
+ S + +P D E + ++
Sbjct: 1617 LSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 276/659 (41%), Gaps = 113/659 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 563
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDR-------TSSDAFTCSEERIYKVDS------ 582
D+ D IK+F EED + +++ S D E + D
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYV 615
Query: 583 ----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 675
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 ASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSV 735
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ + P L M +PD P +
Sbjct: 736 PGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 795
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYI 852
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 FSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 904
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 953
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1013
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1070
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.5 bits (101), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>gi|358332039|dbj|GAA50765.1| endoribonuclease Dicer homolog 4 [Clonorchis sinensis]
Length = 1042
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 200/427 (46%), Gaps = 85/427 (19%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL-LHDTVDEGELTRRRSNAVNNSN 1082
L+++LT ++ +LERLE+LGD+ L+ ++ + DEG+LT RR + V+NSN
Sbjct: 573 LVESLTLLGARDAVNLERLELLGDSVLQLISTLTVYSGSPEGADEGQLTARRVDLVSNSN 632
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L +A R Q Y Q + P F C + S R D VR
Sbjct: 633 LCNIAVRLGWQNYCTGQVYSPPDHFIFP--CYDLSSSVPYRD----------SDTRLFVR 680
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI-----------------Q 1185
L K++AD+VEA+VG F+ G AA L ++GI Q
Sbjct: 681 -------LTDKSLADMVEAIVGCFLQHMGLPAAFRLLTYLGISPYANPSSQGKEVGAWDQ 733
Query: 1186 VEFEASQVTNICIS-SKSFLPLSA--------------------------------SLDM 1212
+ E Q I S F PL S+ +
Sbjct: 734 LLSETQQNNRHHIRHSTPFRPLEVRPTFYLPDRNCPAGSTSILPNEIEKDDLIERLSVRL 793
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
L+ +LG+QF LL++A H S + L G YQRLEFLGDAVL Y+IT YLY + +
Sbjct: 794 VGLQNILGYQFKDISLLIRALTHQSSPQTSLFGSYQRLEFLGDAVLGYVITIYLYEKHVE 853
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST---- 1326
PGQLT+ RS +V+N + A V+ + ++I + +T ++ +++ +++
Sbjct: 854 FDPGQLTESRSNIVSNNSLACAIVEHQLHPYIIHNQPAF-DTAVTFIQFILDTTTSVSDQ 912
Query: 1327 -----REVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ-- 1379
+EV +G R K+L D+ E+ +GAI +D+ +L+TV +++ LDP + L+
Sbjct: 913 LELLNQEVLKGLRV-KILADVFEAIVGAIFVDTKGSLSTVSQLIHRLLDPRIDDYLLRNP 971
Query: 1380 LNPIREL 1386
+NP++ +
Sbjct: 972 MNPLKSM 978
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 44/205 (21%)
Query: 983 GSSLSLLPS------IMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQER 1036
S S+LP+ ++ RL LV L+++L F + +L++ALT + +
Sbjct: 770 AGSTSILPNEIEKDDLIERLSVRLVG--LQNILGYQFKD-----ISLLIRALTHQSSPQT 822
Query: 1037 F---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
S +RLE LGDA L Y + +L+ H D G+LT RSN V+N++L + L
Sbjct: 823 SLFGSYQRLEFLGDAVLGYVITIYLYEKHVEFDPGQLTESRSNIVSNNSLACAIVEHQLH 882
Query: 1094 VY-IRDQP-FDPC----QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
Y I +QP FD QF +T ++ Q + LN EV KG
Sbjct: 883 PYIIHNQPAFDTAVTFIQFIL-----------DTTTSVSDQLEL-----LNQEVL--KG- 923
Query: 1148 HWLHKKTIADVVEALVGA-FIDDSG 1171
L K +ADV EA+VGA F+D G
Sbjct: 924 --LRVKILADVFEAIVGAIFVDTKG 946
>gi|6102924|emb|CAB59269.1| hypothetical protein [Homo sapiens]
Length = 525
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 160 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 219
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 220 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 279
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 280 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 339
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 340 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 399
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 400 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 459
Query: 1386 LLEL 1389
LLE+
Sbjct: 460 LLEM 463
Score = 43.5 bits (101), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 305 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 362
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 363 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 410
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 411 MGDIFESLAGAIYMDSGMSLETVW 434
>gi|146149942|gb|ABQ02405.1| dicer [Schistosoma mansoni]
Length = 2641
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 165/377 (43%), Gaps = 82/377 (21%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT + +LER+E +GD+FLK+ V HL+L + EG+L+ RS V NSNL
Sbjct: 1947 ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCNSNL 2006
Query: 1084 LKLAARNNLQVYIRDQPFDP---------------------CQFFALGRR-----CPRIC 1117
+L +LQ + F+P + F R +
Sbjct: 2007 YRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIWSTDTLM 2066
Query: 1118 SKETERTIH---------------SQYDGRAPDDLNAEVRCSKG----HHWLHKKTIADV 1158
E R I S++D P L+A+ ++ + K+IAD
Sbjct: 2067 DDEVLRNIDFIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIPDKSIADC 2126
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD------- 1211
VEAL+G ++ G ++A ++W GI S + + LP S LD
Sbjct: 2127 VEALIGCYLTTRGERSALRLMQWFGIDC-LHKSDNSQPTARAPWSLPKSNYLDTDENRAN 2185
Query: 1212 ---------MATLEILLGHQFLHRGLLLQAFVHPSFNRLG-------------------- 1242
LE L + F LL+QAF HPS+++L
Sbjct: 2186 LNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNLMFSTDL 2245
Query: 1243 GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
CYQRLEFLGDAVLDY+IT +LY + PG LTDLRS LVNN FA +AV +K+
Sbjct: 2246 DCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRIGLHKYF 2305
Query: 1303 IFDSNVLSETINNYVDY 1319
S L TI+ +V Y
Sbjct: 2306 RASSPQLLHTIDVFVRY 2322
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 1310 SETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
S NN + +T + + PK L D+ ES GAI LDS F+L+TVW+I
Sbjct: 2486 SNNANNTIPTNTGHLTTNRLSDDVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFY--- 2542
Query: 1370 DPILK------FSNLQLNPIRELLEL 1389
PI+K + + +P+R+LLEL
Sbjct: 2543 -PIMKERIERYTACIPKSPVRQLLEL 2567
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 88/279 (31%)
Query: 477 LEKFRSGELNLLVATK-----VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ-- 529
+ FR G +NLLVAT+ V G ++ C LVI LP ++A ++ S+ R+R+
Sbjct: 769 ITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRLVNYG 828
Query: 530 SEYAFLVDSGN--------------QRELDLIKNFSKEEDRMNREIMDRTSS----DAF- 570
++ +L+D + Q L+ +N SK+ D + +D S D F
Sbjct: 829 AKVIYLMDHDSIEKINNNNNNNVNKQSNLNDKQNRSKQTD--DHSTVDSMYSNHINDQFL 886
Query: 571 ----------------------------TCSEERIYKVDSSGAC---ISAGYGVSLLHRY 599
T ++ + + G C ++++++Y
Sbjct: 887 GNFQQLEQLLLQRCRGYNVFADEHAIDPTVVDKILPPIFPRGPCGPKFCLSKAINIINQY 946
Query: 600 CSKLPHDEFFNPKPKFYY----------------------FDDL--GGTI----CHIILP 631
C++LP D N PK+Y+ DL GT C + LP
Sbjct: 947 CARLPSDYITNLTPKWYWKIFPQPQGFTPSSTGPGSTCGSLKDLQPDGTFNLYQCVLRLP 1006
Query: 632 ANAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
N+ + + IVG P + AK A AI L+ G ++
Sbjct: 1007 INSSVKETIVGEPMVCKKLAKYSAAFNAIHLLYLSGEMD 1045
>gi|94957752|ref|NP_001035555.1| endoribonuclease Dicer [Gallus gallus]
gi|257051054|sp|Q25BN1.3|DICER_CHICK RecName: Full=Endoribonuclease Dicer
gi|90074858|dbj|BAE87103.1| Dicer protein [Gallus gallus]
Length = 1921
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEA----------SQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V ++E+ S+ N
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSEQKN 1615
Query: 1196 ICISSKSF-------------------LPLSASLDMATLEILLGH--------------Q 1222
+ +S S +P D E L H
Sbjct: 1616 LSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYS 1675
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1795
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855
Query: 1386 LLEL 1389
LLE+
Sbjct: 1856 LLEM 1859
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 273/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + SE +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D + ++ + ++RYC++LP D F + PK + T + LP N+P+
Sbjct: 616 LRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTEAD--------SAYCVLPLNIVDDSSTLDIDFKFMEDIEKSE 904
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
+ K +P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARTGIPSTQYTKEMPFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCG-GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ + KV + + W +E +++VLVM + L L + ++
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A +HPY +IMK D PRI G+TAS + GK A+
Sbjct: 165 SLSNINLLVFDECHLA--IQDHPYREIMK--ICEDYPSCPRILGLTASILNGKCDPAELE 220
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
+A+ + D L+ + S P V GP + +
Sbjct: 221 EKIKKLEKILKSNAE--TATDLVVLDRYTSQPCEIVVDCGPYTDKS 264
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.7 bits (99), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1807 MGDIFESLAGAIYMDSGM 1824
>gi|149636857|ref|XP_001510982.1| PREDICTED: endoribonuclease Dicer-like [Ornithorhynchus anatinus]
Length = 1921
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 150/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEASQ------------- 1192
K+IAD VEAL+G ++ G +AA FL +G++V E+E++
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWESTLSPSTQSFNDQPRN 1615
Query: 1193 -VTNICISSKSFLPLSASLDMA-----------------------------TLEILLGHQ 1222
+TN +S + S DM E + +
Sbjct: 1616 LLTNYAPASTTNTQSSFYKDMEYGCLKIPPRCMFDHPDAEKTLIHLISGFENFERKINYN 1675
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1795
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855
Query: 1386 LLEL 1389
LLE+
Sbjct: 1856 LLEM 1859
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 163/651 (25%), Positives = 269/651 (41%), Gaps = 96/651 (14%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGN----QRELDLIKNFSK-EEDRMNREIMDRTSSDAFTCSEERIY-----KVDSSGA 585
DS + +L K K ++ ++ + + ++ I+ + D
Sbjct: 564 ADSDKIVTFEEDLKTYKAIEKILRNKCSKSVDPGETETEPVVDDDDIFPPYVLRPDDGSP 623
Query: 586 CISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH-QIVGTP 643
++ + ++RYC++LP D F + PK + T + LP N+P+ IVG P
Sbjct: 624 RVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDSTFYSTLYLPINSPLRASIVGPP 683
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEG 698
S A++ L E LHK+G L+D+L+P + D + G
Sbjct: 684 MSCTRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 743
Query: 699 SRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADRIYREFG 745
R + + +P LR S+ K P L M +PD P + R FG
Sbjct: 744 KRRQCYPKAIPECLRNSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFG 803
Query: 746 LFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV-------ILDR 797
+ +P + H V + G ++ +L SG + Q E+ ++ IL
Sbjct: 804 ILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRL 860
Query: 798 SEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPVFGTPGGS 853
+ EF P D + Y +LP+ +S +D+K + S
Sbjct: 861 EKPALEFKPTEAD--------SAYCVLPLNVVNDSSTLDIDFKFMDDIEKSEA------- 905
Query: 854 VDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKD 908
R +PS + D +++++ ++ + FY V ++ + S +
Sbjct: 906 --RTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYTDLTPLSKFPS 962
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELEE 961
+ + ++ + Y + L + QPLL NLL R L S + + +
Sbjct: 963 PEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKA 1022
Query: 962 YFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1023 KWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 118/239 (49%), Gaps = 11/239 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDLNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ + KV + + W +E Q++VLVM + L L + ++
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSSLEISASWTKEKWNQEFTQHQVLVMTCHVALNVLKNDYL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK A+
Sbjct: 165 SLSDINLLVFDECHLAIL--DHPYREIMK--ICENYPSCPRILGLTASILNGKCDPAE-- 218
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
L + I LE +L + + D L+ + S P V GP D S Y ++L E
Sbjct: 219 LEEKIQKLEKILKSSAETATDLVVLDRYSSQPCEIVVDCGPYA-DKSGLYEILLKELDE 276
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1807 MGDIFESLAGAIYMDSGM 1824
>gi|71051733|gb|AAH98796.1| Dicer1 protein [Rattus norvegicus]
Length = 401
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 148/302 (49%), Gaps = 65/302 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ +
Sbjct: 38 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQQKS 97
Query: 1196 ------ICISSKSF-----------LPLSASLDMATLEILLGHQ--------------FL 1224
+S +S +P D E L H F
Sbjct: 98 PSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYIFK 157
Query: 1225 HRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 158 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 217
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR-------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 218 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK 277
Query: 1335 -----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELL 1387
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELL
Sbjct: 278 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELL 337
Query: 1388 EL 1389
E+
Sbjct: 338 EM 339
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 181 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 238
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 239 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 286
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 287 MGDIFESLAGAIYMDSGM 304
>gi|119602001|gb|EAW81595.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1923
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1617
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1618 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1677
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1678 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1737
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1738 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1797
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1798 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1857
Query: 1386 LLEL 1389
LLE+
Sbjct: 1858 LLEM 1861
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 175/661 (26%), Positives = 281/661 (42%), Gaps = 115/661 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLFSSDSDS 693
IVG P S + A++ L E LHK+G L+D+L+P +E E+E L + S
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 694 YEGEGSRGELHEMLVPAV----LRQSWTKSQYPVRLNFYFMQF---IPD----------P 736
G + + AV LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAVSIECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYP 795
Query: 737 ADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV-- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 PEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQ 852
Query: 794 -----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSS 844
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 YIFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKS 904
Query: 845 PV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVF 898
G P +++ P L+ D +++++ ++ + FY V ++
Sbjct: 905 EARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYT 953
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED----- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 DLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKAL 1013
Query: 954 --SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
S + + + ++ L PELC + I S + LPSI++RL LL A EL
Sbjct: 1014 PLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEEL 1071
Query: 1006 K 1006
+
Sbjct: 1072 R 1072
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.1 bits (105), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 43.9 bits (102), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1703 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1760
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1761 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1808
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1809 MGDIFESLAGAIYMDSGMSLETVW 1832
>gi|193786026|dbj|BAG51002.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 189 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 248
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 249 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 308
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 309 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 368
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 369 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 428
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 429 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 488
Query: 1386 LLEL 1389
LLE+
Sbjct: 489 LLEM 492
Score = 43.5 bits (101), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 334 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 391
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 392 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 439
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 440 MGDIFESLAGAIYMDSGMSLETVW 463
>gi|193787170|dbj|BAG52376.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 142 bits (358), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 455 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 514
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 515 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 574
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 575 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 634
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 635 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 694
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 695 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 754
Query: 1386 LLEL 1389
LLE+
Sbjct: 755 LLEM 758
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 194 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 253
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 254 LYRLGKKKGLPSRMVVSIFDP 274
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 193 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 251
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 600 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 657
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 658 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 705
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 706 MGDIFESLAGAIYMDSGMSLETVW 729
>gi|254281274|ref|NP_001156875.1| endoribonuclease Dicer [Taeniopygia guttata]
Length = 1921
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 169/662 (25%), Positives = 277/662 (41%), Gaps = 118/662 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEVEFRK 500
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 501 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNY 560
Query: 533 AFLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------ 576
L D+ D IK+F EED + +I+ S + SE
Sbjct: 561 IMLADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDASETETEPIVDDDDVFP 612
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPAN 633
+ + D + ++ + ++RYC++LP D F + PK ++ T + LP N
Sbjct: 613 PYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTWELPDHTFYSTLYLPIN 672
Query: 634 APIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLF 687
+P+ IVG P S A++ L E LHK+G L+D+L+P + D
Sbjct: 673 SPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEE 732
Query: 688 SSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD--------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 733 ETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKL 792
Query: 736 -PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV 793
P + R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 793 YPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRL 849
Query: 794 -------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCL 842
IL + EF P D + Y +LP+ +S +D+K +
Sbjct: 850 HQYIFSHILRLEKPALEFKPTEAD--------SAYCVLPLNVVDDSSTLDIDFKFMEDIE 901
Query: 843 SSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIV 897
S + K +P L+ D +++++ ++ + FY V ++
Sbjct: 902 KSEARTGIPSTQYTKEMPFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVY 951
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED---- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 952 TDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKA 1011
Query: 954 ---SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
S + + + ++ L PELC + I S + LPSI++RL LL A E
Sbjct: 1012 LPLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEE 1069
Query: 1005 LK 1006
L+
Sbjct: 1070 LR 1071
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 145/304 (47%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------------------------E 1187
K+IAD VEAL+G ++ G +AA FL +G++V
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGTLCATRENCNSEQKN 1615
Query: 1188 FEASQVTNICISSKSFL-----------PLSASLDMATLEILLGH--------------Q 1222
+ V ++S+ L P D E L H
Sbjct: 1616 LSPNSVAASVVNSEPSLCKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYS 1675
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1795
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855
Query: 1386 LLEL 1389
LLE+
Sbjct: 1856 LLEM 1859
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ + KV + + W +E +++VLVM + L L + ++
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A +HPY +IMK D PRI G+TAS + GK A+
Sbjct: 165 SLSNINLLVFDECHLA--IQDHPYREIMK--ICEDYPSCPRILGLTASILNGKCDPAE-- 218
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
L + I LE +L + + D L+ + S P V GP + +
Sbjct: 219 LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDKS 264
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1807 MGDIFESLAGAIYMDSGM 1824
>gi|356555908|ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 285
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 136/281 (48%), Gaps = 28/281 (9%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
+S+ QK D A YQLE A+ EN IVYL TG GKT IAV+L+ AH +R
Sbjct: 9 VDSNTQQQKITADVLPFAGSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRSYAHHLR 68
Query: 102 KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLV 160
KP I +FL P V LV QQA+ +++ KV F G W++E++++EV V
Sbjct: 69 KPSPQISVFLVPQVVLVSQQAEAVKKHTDLKVGMFWGDMGVDFWDATTWKQEVEKHEVFV 128
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV------ 214
M P ILL CL H F+K+ LI +LI DECHHA + HPYA IM DI++
Sbjct: 129 MTPAILLNCLRHSFLKLNLIKVLIMDECHHA--RGKHPYACIMTVL--GDIIESLAGAIL 184
Query: 215 ------PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFV-- 264
+ + P++ + + I L L + Y + ED +
Sbjct: 185 VDSRFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNY 244
Query: 265 -----SSPVVRVYQY-GPVINDTSSSYVTCSEQLAEIKREQ 299
+ V+ Y+Y GP + DT+ + C E L +K E+
Sbjct: 245 RMELEADGVIHEYEYTGPALRDTAKK-IACKEILNSLKEEE 284
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCN--SYDL 1395
VLGD++ES GAIL+DS FN VW+ + L+P++ L+L+PIREL ELC SY +
Sbjct: 171 VLGDIIESLAGAILVDSRFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKI 230
Query: 1396 DLQFPSLKKG-GKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
L+ S K G + E + G + + A R A +IA +++ + LK
Sbjct: 231 VLEDVSRKDGVTNYRMELEADGVIHEYEYTGPAL---RDTAKKIACKEILNSLK 281
>gi|327259078|ref|XP_003214365.1| PREDICTED: endoribonuclease Dicer-like isoform 1 [Anolis
carolinensis]
Length = 1918
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 147/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------EFEASQ-- 1192
K+IAD VEAL+G ++ G +AA FL +G++V F + Q
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKIDWDSALYSHTEHFNSQQKH 1612
Query: 1193 VTNICIS-------SKSF---------LPLSASLDMATLEILLGH--------------Q 1222
+ CIS S + +P D E L H
Sbjct: 1613 SSANCISVSLSNQESSRYKDLVYGCLKIPPRCMFDHPDAERTLNHLISGFENFEKKINYS 1672
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1673 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1732
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1733 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1792
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW + + P++ KFS N+ +P+RE
Sbjct: 1793 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANVPRSPVRE 1852
Query: 1386 LLEL 1389
LLE+
Sbjct: 1853 LLEM 1856
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 160/650 (24%), Positives = 266/650 (40%), Gaps = 94/650 (14%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMK-------SI 476
I+FV R TA L+ +++ LA +F+ G G M+ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEVEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLA 564
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI----------YKVDSSGAC 586
DS + + K +++ R ++ + T SE I + + G
Sbjct: 565 DSDKIKHFEEDLKTYKAIEKILRNKCSKSVDNNETESEPIIDDDDIFPPYVLRSEDGGPR 624
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH-QIVGTPQ 644
++ + ++RYC++LP D F + PK + T + LP N+P+ IVG P
Sbjct: 625 VTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDNTFYSTLYLPINSPLRVSIVGPPM 684
Query: 645 SSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEGS 699
A++ L E LHK+G L+D+L+P + D + G
Sbjct: 685 GCTRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTK 744
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADRIYREFGL 746
R + + +P L++S+ K P L M +PD P + R FG+
Sbjct: 745 RRQCYPKAIPECLKESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTARCFGI 804
Query: 747 FVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV-------ILDRS 798
+P + H V + G ++ +L SG + Q ++ ++ IL
Sbjct: 805 LTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLDLITRLHQYIFSHILRLE 861
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPVFGTPGGSV 854
+ EF P D + Y +LP+ +S +D+K + S
Sbjct: 862 KPALEFRPTDAD--------SAYCVLPLNVVDDSSTLDIDFKFMEDIEKSEA-------- 905
Query: 855 DRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKDS 909
R +PS + D +++++ ++ + FY V ++ + S +
Sbjct: 906 -RTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYTDLTPLSKFPSP 963
Query: 910 DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELEEY 962
+ + ++ + Y + L + QPLL NLL R L S + + +
Sbjct: 964 EYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAK 1023
Query: 963 FDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1024 WESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLLI EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
LV QQ + KV + + W +E D+Y+VLVM Q+ L L +
Sbjct: 105 LVAQQVSTVRTHSDLKVGEYSSLEITETWTKERWNQEFDKYQVLVMTCQVALNILKREHL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LLIFDECH A +HPY IMK PRI G+TAS + GK ++
Sbjct: 165 SLSNINLLIFDECHLA--IQDHPYRAIMK--LCESCPSCPRILGLTASILNGKCDPSE-- 218
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
L + I LE +L + + D L+ + S P V GP + +
Sbjct: 219 LEEKIQKLEKILKSSAETATDLVVLDRYTSQPCEIVVDCGPYTDKS 264
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1294 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1353
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1354 LYRLGKKKGLPSRMVVSIFDP 1374
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1293 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1351
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1698 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1755
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1756 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1803
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1804 MGDIFESLAGAIYMDSGM 1821
>gi|327259080|ref|XP_003214366.1| PREDICTED: endoribonuclease Dicer-like isoform 2 [Anolis
carolinensis]
Length = 1915
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 147/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------EFEASQ-- 1192
K+IAD VEAL+G ++ G +AA FL +G++V F + Q
Sbjct: 1550 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKIDWDSALYSHTEHFNSQQKH 1609
Query: 1193 VTNICIS-------SKSF---------LPLSASLDMATLEILLGH--------------Q 1222
+ CIS S + +P D E L H
Sbjct: 1610 SSANCISVSLSNQESSRYKDLVYGCLKIPPRCMFDHPDAERTLNHLISGFENFEKKINYS 1669
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1670 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1729
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1730 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1789
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW + + P++ KFS N+ +P+RE
Sbjct: 1790 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKFSANVPRSPVRE 1849
Query: 1386 LLEL 1389
LLE+
Sbjct: 1850 LLEM 1853
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 161/653 (24%), Positives = 267/653 (40%), Gaps = 93/653 (14%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMK-------SI 476
I+FV R TA L+ +++ LA +F+ G G M+ +
Sbjct: 435 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEVEFRKQEEV 494
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 495 LRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLA 554
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI----------YKVDSSGAC 586
DS + + K +++ R ++ + T SE I + + G
Sbjct: 555 DSDKIKHFEEDLKTYKAIEKILRNKCSKSVDNNETESEPIIDDDDIFPPYVLRSEDGGPR 614
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH-QIVGTPQ 644
++ + ++RYC++LP D F + PK + T + LP N+P+ IVG P
Sbjct: 615 VTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDNTFYSTLYLPINSPLRVSIVGPPM 674
Query: 645 SSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEGS 699
A++ L E LHK+G L+D+L+P + D + G
Sbjct: 675 GCTRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTK 734
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADRIYREFGL 746
R + + +P L++S+ K P L M +PD P + R FG+
Sbjct: 735 RRQCYPKAIPECLKESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTARCFGI 794
Query: 747 FVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV-------ILDRS 798
+P + H V + G ++ +L SG + Q ++ ++ IL
Sbjct: 795 LTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLDLITRLHQYIFSHILRLE 851
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV-FGTPGGS 853
+ EF P D + Y +LP+ +S +D+K + S G P
Sbjct: 852 KPALEFRPTDAD--------SAYCVLPLNVVDDSSTLDIDFKFMEDIEKSEARTGIPSTQ 903
Query: 854 VDRKSLPSHGP--LQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPY 906
+++ P +L + + L + ++ + FY V ++ + S +
Sbjct: 904 YTKET-----PFIFKLEDYQDAVIIPRRYLPLSRYRNFDQPHRFY-VADVYTDLTPLSKF 957
Query: 907 KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHEL 959
+ + ++ + Y + L + QPLL NLL R L S + +
Sbjct: 958 PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR 1017
Query: 960 EEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1018 KAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1068
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLLI EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNGKRTVFLVNSAN 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
LV QQ + KV + + W +E D+Y+VLVM Q+ L L +
Sbjct: 95 LVAQQVSTVRTHSDLKVGEYSSLEITETWTKERWNQEFDKYQVLVMTCQVALNILKREHL 154
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LLIFDECH A +HPY IMK PRI G+TAS + GK ++
Sbjct: 155 SLSNINLLIFDECHLA--IQDHPYRAIMK--LCESCPSCPRILGLTASILNGKCDPSE-- 208
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
L + I LE +L + + D L+ + S P V GP + +
Sbjct: 209 LEEKIQKLEKILKSSAETATDLVVLDRYTSQPCEIVVDCGPYTDKS 254
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1291 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1350
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1351 LYRLGKKKGLPSRMVVSIFDP 1371
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1290 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1348
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1695 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1752
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1753 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1800
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1801 MGDIFESLAGAIYMDSGM 1818
>gi|121807817|sp|Q2VF19.1|DCL1_CRYPA RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL-1; Includes: RecName:
Full=ATP-dependent helicase DCL-1
gi|77632774|gb|ABB00356.1| dicer-like protein 1 [Cryphonectria parasitica]
Length = 1548
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 141/265 (53%), Gaps = 21/265 (7%)
Query: 24 TSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGC 83
T V++ + + + S G +K P R YQ+EL ++A ++N I L TG
Sbjct: 68 TRKAVKQSVNQDNSLAYMIRSWEGGEKIITSP----RDYQMELFERAKQQNTIAVLDTGS 123
Query: 84 GKTHIAVLLI-----YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG 138
GKT IA LL+ EL + + I FL VAL QQ V+E ++ V F G
Sbjct: 124 GKTLIAALLLDHTVNQELEDRAKGLPRRIAFFLVEKVALAFQQHAVLECNLAHSVAVFSG 183
Query: 139 GS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNH 197
S K + WE ++ +EV+V +IL CL + +I+++ I LL+FDE HH K NH
Sbjct: 184 ESIKNTWTKGFWETQLADHEVIVCTAEILNQCLQYAYIRIDQINLLVFDEAHH--TKKNH 241
Query: 198 PYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
PYA+I+KD+Y K +++PRIFGMTASPV A ++ ++ LE LL +++ +
Sbjct: 242 PYARIIKDYYASGKDRGLRLPRIFGMTASPV-----DALIDVRQAAIELEGLLHSRIATT 296
Query: 255 EDAEDLESFVSSPVVR-VYQYGPVI 278
D + L V P +Y+Y P++
Sbjct: 297 ADPDALRRAVGRPKKEIIYKYNPLV 321
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 77/459 (16%)
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
++I D+ + LLPSI+HR+E L+A++ LL +++ E L K +
Sbjct: 1002 MRISPLPVDVVAMAYLLPSIIHRIEQNLIALDACRLLQLDI--HPDLALEALTKDSDNQG 1059
Query: 1033 CQERF-----------------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
ER + ERLE+LGD+FLK A +F L DE + R
Sbjct: 1060 EDERMDSIQAFEPVNFQPGMGANYERLELLGDSFLKMATTIAVFTLIPNKDEFDYHCERM 1119
Query: 1076 NAVNNSNLLKLAARNNLQV--YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRA 1133
+ N NL +A ++L++ YIR + F+ ++ + + + +T Q D
Sbjct: 1120 VMICNQNLFGVAKSDDLKLHEYIRSKSFERGTWYPVLK----LEFGKTHLKTLKQMD--- 1172
Query: 1134 PDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI------DDSGFKAATAFLKWIGIQ-- 1185
H L K+IADV EAL+GA DD A A + + +
Sbjct: 1173 -------------EHRLADKSIADVCEALIGAAYMTTRKHDDYDL-AVRAVTRLVNHKQH 1218
Query: 1186 --VEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPS----F 1238
+++ + ++ +A LDMA + G+QF H +L AF HPS F
Sbjct: 1219 PMTKWDDYHAAYVMPGWQTMPANAAELDMAQKIHEATGYQFKHPRVLRSAFRHPSRPYVF 1278
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
+++ YQRLEFLGDA+ D YL+ + P P LT+ + +V+NQ +AV F
Sbjct: 1279 DKVPH-YQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGF 1337
Query: 1299 YKFLIFDSNVLSETINNYVDYMIT--------------PSSTREVK---EGPRCPKVLGD 1341
+KF++ + I+ YV + P S E P+ PK + D
Sbjct: 1338 HKFILHHHASIGSQIHEYVTEITEARRAAEDAAEAAGKPRSAYSRDYWVEAPQPPKCIPD 1397
Query: 1342 LVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
++E+ +GAI +DS ++ + V + + + P F+++++
Sbjct: 1398 VLEAYVGAIFVDSKYDYSVVQQFFHAHVLPF--FASMRM 1434
Score = 107 bits (267), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 22/292 (7%)
Query: 402 EP-FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALS-YILQNLKFLASWRCHFLV 459
EP S KL L +L + ++CIVFV R TA+ L+ + + + + L+
Sbjct: 418 EPGLLSSKLKTLSKLLEEYFTDSSIRCIVFVERRWTAKLLTDFFESHAAEIPGLKVGSLM 477
Query: 460 GVNA-GLKSMS--RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
G NA G S + R +++IL F+ G N + AT V EEGLDI C L+IRFD+ +T+
Sbjct: 478 GANAEGGSSQTSFREQIRTILS-FKKGNTNCIFATSVAEEGLDIPDCNLIIRFDICKTMI 536
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR----EIMDRT------S 566
+IQSRGRAR S Y L++ GN ++ ++ E + R + DR
Sbjct: 537 QYIQSRGRARQADSTYIHLIEGGNGDHRRIMHQNAENEKLLRRFCNTQPEDRLLKGSDYD 596
Query: 567 SDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKL----PHDEFFNPKPKFYYFDD 620
D F E +R Y + S+GA ++ + +L + + L + E + +
Sbjct: 597 MDFFLRQERNQRQYTIKSTGARLTYKNSLPILQAFLNTLRNQDDYAEGMDLVADYSILSV 656
Query: 621 LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
GG IC +++P +P+ +G S+ + AK A + L + L+D+L
Sbjct: 657 QGGFICEVMMPPLSPVTSAIGKVYSTKQVAKCSAAFELCFQLIQKKFLDDHL 708
>gi|326670834|ref|XP_694124.3| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Danio rerio]
Length = 1035
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 248/536 (46%), Gaps = 87/536 (16%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAPTV 115
R YQ+E+ + A+EE NIIV L TG GKT +AV + E HL RK QK + L V
Sbjct: 298 RDYQMEVARPALEEKNIIVCLPTGSGKTRVAVFITKE--HLERKQRMGQKGKVVVLVNKV 355
Query: 116 ALVQQQAKVIEESIG------FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
LV+Q K G + V G S+ LK + + I++ ++++ QIL
Sbjct: 356 PLVEQHYKA---EFGRFLKHQYSVERVSGASQ-LK--ISFPQIIEKNDIIICTAQILENS 409
Query: 170 LY------HRFIKMELIALLIFDECHHAQVKS--NHPYAKIMKDFYKPDIMK-------- 213
L I++ L++ DECHH + NH + +K + ++K
Sbjct: 410 LAKAKNGDEDGIELSQFTLMVIDECHHTKKGGVYNHIMIRYLKQKNRNQLLKKQDKTLVP 469
Query: 214 VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ 273
+P+I G+TASP VG GA +Q + I + LDA + E+ E+ +P R+ +
Sbjct: 470 IPQILGLTASPGVG-GAVSQQMAEEHILQICANLDAFTIKTKTFEEEEA--KTPFKRIAK 526
Query: 274 --------YGPVINDTSSSYVTCS--EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNR 323
+G VI T + + L E + Y + +K +N K+ N+
Sbjct: 527 AEERKEDPFGDVIKKIMDEIHTHADLQPLCEPGTQNYEQWVVQKE------QNAAKEENQ 580
Query: 324 LHDSMKFCLENLGVCG-ALHASYILLSGD-----ETMRNELIEA------EGN-TIDDSL 370
+++ C E+L ALH S + D + NE ++ EGN TI D+
Sbjct: 581 ---NVRVCAEHLRQYNEALHQSNTIRMSDAFRFLDKYHNEELKTKSSPDEEGNITITDT- 636
Query: 371 CRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIG--ILSTFRLQQHMKCI 428
E F +D A E++ +P + L + IL F ++ + I
Sbjct: 637 --------ERFLFTLFKDKKAK---LQELMGKPQYENNNLAQLKTIILKEFSTREKARGI 685
Query: 429 VFVNRIVTARAL-SYILQNLKF-LASWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGE 484
+F ++A AL +I +N KF R +L+G + +K M+ K +L++FR+GE
Sbjct: 686 IFTQTRLSAIALCQWIEENPKFDEVGVRASYLIGGGDQSVVKPMTAAEQKDVLKRFRTGE 745
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
+NLL+AT V EEGLDI C +VIR+ L + IQ+RGR R S Y + ++G+
Sbjct: 746 INLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGRGRAEDSSYTLVAEAGS 801
>gi|258567596|ref|XP_002584542.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905988|gb|EEP80389.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1055
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 214/474 (45%), Gaps = 70/474 (14%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP++RA+ L +LR L +++ E + +E E + L L + + + P
Sbjct: 590 QPVIRAE-LIQLRRNLLDKRTEKEKQNEGECFIC-----LEALTVSAIPASVAALAFAFP 643
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFSL--------- 1039
+I+ RLE+ L+A+E L S P AE+ L+ALT ++ +E ++
Sbjct: 644 AIISRLESYLIALEACQKLDLSIP------AELALEALTKDSDNTEEHRAMQVHFQRGMG 697
Query: 1040 ---ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGD FLK A LF ++ DE + +R V N NL K A L +I
Sbjct: 698 KNYERLEFLGDCFLKMATSISLFTMNPDNDEYDFHVKRMCLVCNQNLFKAALNLKLYEFI 757
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R Q F ++ G + K +T AP++ H L KTIA
Sbjct: 758 RSQSFSRRGWYPEGLTL--LQGKGQSKT--------APEN----------KHALADKTIA 797
Query: 1157 DVVEALVGA-FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF-LPL--SASLDM 1212
DV EAL+GA ++ ++ + + V V++ SK + LP +A D
Sbjct: 798 DVCEALIGASYLSGGKSHRFDMAVRAVTVFVNSSDHNVSDWQDYSKLYALPRYQTAVSDP 857
Query: 1213 ATLEIL------LGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSY 1263
A ++++ LG+QF + LL AF H S+ CYQRLEFLGD++LD +
Sbjct: 858 AEIDLVAQIKEKLGYQFKYPKLLRSAFTHSSYPSAWAAVPCYQRLEFLGDSLLDMACVEH 917
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--- 1320
LY YP P LT+ + +V+N+ VAV + L S + I YV+ +
Sbjct: 918 LYHRYPDKDPQWLTEHKMAMVSNKFLGCVAVKLGLHPHLRHFSAPIQSQIATYVEEIEAA 977
Query: 1321 -----ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
+P + + P+C L D+VE+ +GAI +DS F V FL
Sbjct: 978 ELESGDSPDAWTSTSDPPKC---LPDMVEAYIGAIFIDSDFRYEVVEDFFERFL 1028
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 134/325 (41%), Gaps = 77/325 (23%)
Query: 404 FFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNL--KFLASWRCHFLVG 460
S K+ RL LS F KCIVF + TAR LS + + ++L R L+G
Sbjct: 40 LLSPKVRRLHQELSKYFERHTDTKCIVFTEKRHTARILSDLFAKIGTEYL---RPGLLIG 96
Query: 461 VNAGLKSMSRNAMKS-ILE--KFRSGELNLLV---------------------ATKVGEE 496
V + + + + ILE KFR+GE+N LV AT V EE
Sbjct: 97 VRSDPSGATNVSFRQQILEVVKFRNGEVNCLVIYLDMLPVGLLMSTRLIVVKFATSVAEE 156
Query: 497 GLDIQTCCLVIR----------------FDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
GLDI C LV+R FDL T+ +IQSRGRAR S +A +V+ N
Sbjct: 157 GLDIPDCNLVVRYANHLRMKMLYTEVDRFDLACTLTQYIQSRGRARHVNSTFAHMVEQDN 216
Query: 541 QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYC 600
+ +K + E+ +R+ + +T + GY +LH +
Sbjct: 217 VVHKESVKYLQ------SSEVSERSRVNIYT------------HVNLVLGYYEPILHLF- 257
Query: 601 SKLPHDEFFNPKPKFYYFDDLGGTI------------CHIILPANAPIHQIVGTPQSSME 648
+K H EF + Y + + C ++LP +P+ + G P S
Sbjct: 258 TKGSHPEFLQRYRRPQYEKETSANVNYYHSFSQNAFHCEVVLPEKSPVRGLTGKPASKKL 317
Query: 649 AAKKDACLKAIEDLHKLGALNDYLL 673
AK+ A + L K G L+D+ +
Sbjct: 318 VAKQSAAFETCLLLRKHGLLDDHFV 342
>gi|19072784|gb|AAL84637.1|AF484523_1 endoribonuclease Dicer [Mus musculus]
Length = 361
Score = 140 bits (354), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 145/299 (48%), Gaps = 65/299 (21%)
Query: 1156 ADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTNICI 1198
AD VEAL+G ++ G +AA FL +G++V E +SQ ++
Sbjct: 1 ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSG 60
Query: 1199 SSKS-----------------FLPLSASLDMATLEILLGH--------------QFLHRG 1227
S S +P D E L H +F ++
Sbjct: 61 SCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKA 120
Query: 1228 LLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVN
Sbjct: 121 YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN 180
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR----------- 1334
N FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 181 NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEKEED 240
Query: 1335 --CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 241 IEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELLEM 299
Score = 42.4 bits (98), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 141 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 198
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 199 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 246
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 247 MGDIFESLAGAIYMDSGM 264
>gi|167046020|gb|ABZ10541.1| dicer-like protein B [Trichoplax adhaerens]
Length = 357
Score = 140 bits (353), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 37/368 (10%)
Query: 1025 LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
LKALT + + F+LE LE LGD++LKYAV FL + EG+L+ +S V+N NL
Sbjct: 1 LKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60
Query: 1085 KLAARNNLQVYIRDQPFDPCQF-----FALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
++ + L YI D F++ ++ I +E T++ R
Sbjct: 61 QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPTQKL 120
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFL-KWIGIQVEFEASQVTNICI 1198
+ +C IADV+EAL+G + + G +A F+ +GI+V + + +
Sbjct: 121 KNKC-----------IADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDD 169
Query: 1199 SS-KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLG---GCYQRLEFLG 1252
+ K + + ++ LE +LG+ F R LL+ A H ++ NR+ CYQRLEFLG
Sbjct: 170 DARKEISKIYNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLG 229
Query: 1253 DAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSET 1312
DA+L Y++ + Y KP L D + N++ A + + +K+ ++S L
Sbjct: 230 DAILQYIVVRHCYHANNNYKPADLHDFVEASLQNESLAVMTMVYGIHKYFFYNSPSLFSQ 289
Query: 1313 INNYVDYMITPS------STRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNL 1358
IN + + T ST E +K+G PK LGDL ES +GAI +D G ++
Sbjct: 290 INQLLQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSI 349
Query: 1359 NTVWKIML 1366
V ++L
Sbjct: 350 EVVNDLVL 357
>gi|449682783|ref|XP_002165718.2| PREDICTED: endoribonuclease Dicer-like [Hydra magnipapillata]
Length = 1001
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 125/231 (54%), Gaps = 35/231 (15%)
Query: 1222 QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+FL++ L+QAF H S+ N + GCYQ+ EFLGDA+LD+LIT ++ S L PGQLT
Sbjct: 768 KFLNKSHLIQAFTHLSYLSNSVTGCYQQYEFLGDAILDFLITLHIQSNTQNLSPGQLTYF 827
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD----------------YMITP 1323
RS +VNN F +A+ SFYK++ SN L + N++++ ++I P
Sbjct: 828 RSAVVNNNTFGLLAIKHSFYKYIYSSSNELFSSYNSFIEIVKDDHGLKDEYFESPFVICP 887
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--N 1381
+ + +EG + PKVLGDL ES GAI LDSG +L TVWKI L P++ ++L +
Sbjct: 888 TGS---EEGYQAPKVLGDLFESVAGAIFLDSGLDLVTVWKIYYPLLKPVIDKYMIKLPRH 944
Query: 1382 PIRELLELCNSYDLDLQFPSLK---KGGKFLAEAKVTGKDKDVFISACATN 1429
P + E ++P K G+ + GKD I AC N
Sbjct: 945 PAVDFFE---------KYPKAKIIFTNGEVVTCTVKFGKDNGTEIKACGQN 986
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 192/496 (38%), Gaps = 114/496 (22%)
Query: 186 DECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLEN 245
DECH+A K H Y K+M+ F + P I G+TAS
Sbjct: 2 DECHNATKK--HSYVKLMEIFGNYPKSEHPHILGLTAS---------------------- 37
Query: 246 LLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALS 305
+++ K V + + ++SF+ + ++ + + S +TCS+ A K S +
Sbjct: 38 IINEKYTGVFNDQAIKSFLKNRILGLER------RMRSKCITCSDPQATTKFAAKPSEIV 91
Query: 306 RKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL-LSGDETMRNELIEAEGN 364
+ S+ N + + +SMK L+ Y L L+ ++ R +
Sbjct: 92 QTFKKGYSV-NGFLEFVPVIESMKKILDT-------KLDYFLCLANEKKTRVSRL----- 138
Query: 365 TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ- 423
+ DD L Q SE A D + + K++L +G L F Q
Sbjct: 139 SFDDLLTE-KLQLSERNACAISVDAMR-------------YCKEILESLGPLCVFWAAQI 184
Query: 424 -----HMKCIVFVNRIVTARALS----YILQNLKFLASWRCHFLVG---------VNAGL 465
+ IVF R TA LS Y ++ + F++G V+ +
Sbjct: 185 LIKQIELHAIVFTQRRCTAVVLSKLINYQVEKDETYKGLNSDFVLGHAFDSNICLVDGSM 244
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
+S +N IL F+ + N+LV+T V EEGLD++ C LV+RFD + QS+GRA
Sbjct: 245 RSEKQNL---ILSNFKQDKFNVLVSTSVVEEGLDVRKCNLVVRFDGINNYREYAQSKGRA 301
Query: 526 RMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDS--- 582
R S++ + + G +E D K +M + F + R+ D
Sbjct: 302 RASGSKFIIMTEEG--QEFDTKK---------QHIVMQQIEEILFEQCQNRVLPTDEEIE 350
Query: 583 --------------------SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
I+ VSLL+RYCS+LP D+F PKF Y
Sbjct: 351 IEMMDEEDEDLPVYFSHNGYDAPRITKDNAVSLLYRYCSRLPSDQFCKTNPKFLYHVLKN 410
Query: 623 GTICHIILPANAPIHQ 638
+LP N + Q
Sbjct: 411 QFCAECMLPLNCSLPQ 426
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 39/249 (15%)
Query: 869 NGWSSESDVENSLV---YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIH 925
+ +E EN +V Y K Y VT I K S + + + V + + Y I
Sbjct: 536 DNLGNEEIYENCVVSKNYGESKNRMYYVTAI--SKLNTSSFIEG-KKTFVQYYLEKYNIE 592
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSS 985
+ P +PL+ + + + +++ + + L PELC+ K+ F D+
Sbjct: 593 IS-PNKPLIDVISCSQQISFTNCESNTNTKKKNVN--MEKLVPELCK-KVSLFPADLHFQ 648
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFP----------EGAEVSAEMLLK--------- 1026
L LP I++ E +A+ELK +++ + + + E LL+
Sbjct: 649 LPCLPRIIYFYEYYFLALELKDMIAEKIKINKSENQGRYQSSVLDLENLLQLKNYVTENV 708
Query: 1027 ----------ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
ALTT + F LERLE+LGD+FLK AV +F + + EG+LT RR
Sbjct: 709 KSPSVLKIFEALTTRQASMPFDLERLEVLGDSFLKQAVSIFVFFQNPSFHEGKLTIRRKK 768
Query: 1077 AVNNSNLLK 1085
+N S+L++
Sbjct: 769 FLNKSHLIQ 777
>gi|221361577|emb|CAX18337.1| dicel-like 2 [Nicotiana benthamiana]
Length = 224
Score = 140 bits (353), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 133/240 (55%), Gaps = 26/240 (10%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+A+TT+KC E+F LE LE LGD+FLKYA LF ++ EG LT ++++ ++N+ L
Sbjct: 6 VLEAITTKKCVEKFHLESLETLGDSFLKYAASIQLFKTYENHHEGLLTVKKNSIISNAAL 65
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
KL + +IR++PFD + G +SQ + L V+
Sbjct: 66 CKLGCARKIPGFIRNEPFDLKGWLIPGD--------------NSQVYNFDEEVLMPSVKM 111
Query: 1144 -SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
S+G K +ADVVEAL+GAF+ G AA +F+KW+GI ++F + S
Sbjct: 112 YSRGRQKTKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGIDIDF-------VDAPSPR 164
Query: 1203 FLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDY 1258
P++A +++ LE LL ++F LL++A H S+ + CYQRLEFLGD VLDY
Sbjct: 165 HFPMNAEKLVNVRYLESLLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDVVLDY 224
>gi|387015528|gb|AFJ49883.1| Endoribonuclease Dicer-like isoform 1 [Crotalus adamanteus]
Length = 1917
Score = 140 bits (353), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 147/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--EFEASQVTNI-------------- 1196
K+IAD VEAL+G ++ G +AA FL +G++V + ++ N+
Sbjct: 1552 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWDNVLCSYRDHFNNQQKH 1611
Query: 1197 ----CISSKSF----------------LPLSASLDMATLEILLGH--------------Q 1222
CIS+ +P D E L H
Sbjct: 1612 SSVNCISATLANQETSHYKDLVYGCLKIPPRCMFDHPDAETTLNHLISGFENFEKKINYS 1671
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1672 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1731
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1732 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1791
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DS +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1792 EKEEDIEVPKAMGDIFESLAGAIYMDSEMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1851
Query: 1386 LLEL 1389
LLE+
Sbjct: 1852 LLEM 1855
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 168/661 (25%), Positives = 270/661 (40%), Gaps = 116/661 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAMK------ 474
I+FV R TA L+ +++ L +++S +F+ G G M+
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIGKNQPRSKQMEIEFRKQ 501
Query: 475 -SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 502 EEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYI 561
Query: 534 FLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------- 576
L DS D IK F EED + +I+ S + SE
Sbjct: 562 MLADS------DKIKCF--EEDLKTYKAIEKILRNKCSKSVDISETENEPIIDDDDIFPP 613
Query: 577 -IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANA 634
+ + + G ++ + ++RYC++LP D F + PK + L T + LP N+
Sbjct: 614 YVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELLDNTFYATLYLPINS 673
Query: 635 PIH-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFS 688
P+ IVG P S A++ L E LHK+G L+D+L+P + D
Sbjct: 674 PLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEE 733
Query: 689 SDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD---------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 734 TSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLY 793
Query: 736 PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV- 793
P + R FG+ +P + H V + G ++ +L S + Q E+ ++
Sbjct: 794 PPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSSFTLSLQMLELITRLH 850
Query: 794 ------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLS 843
IL + EF P D + Y +LP+ S +D+K +
Sbjct: 851 QYIFSHILRLEKPALEFRPTDAD--------SAYCVLPLNVVDGSSTLDIDFKFMENIEK 902
Query: 844 SPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVF 898
S R +PS + D +++++ ++ + FY V ++
Sbjct: 903 SEA---------RTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFY-VADVYT 952
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED----- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 953 DLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKAL 1012
Query: 954 --SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
S + + + ++ L PELC + I S + LPSI++RL LL A EL
Sbjct: 1013 PLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEEL 1070
Query: 1006 K 1006
+
Sbjct: 1071 R 1071
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 114/221 (51%), Gaps = 10/221 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLLI EL++ IR K + +FL + +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIREDFKKKGKRTVFLVNSAS 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ ++ KV + + W +E +Y+VLVM Q+ L L + +
Sbjct: 105 QVAQQVSTVKTHSDLKVGDYSSVEITEAWTKERWNQEFAKYQVLVMTCQMALNVLKNEHL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LLIFDECH A +HPY +IMK PRI G+TAS + GK A+
Sbjct: 165 ALSNINLLIFDECHLA--IQDHPYREIMK--LCESCPSCPRILGLTASILNGKCDPAE-- 218
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
L + I LE +L + + D L+ + S P V GP
Sbjct: 219 LEEKIQKLEKILKSSAETATDLVVLDRYTSQPCEIVVDCGP 259
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1295 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1354
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1355 LYRLGKKKGLPSRMVVSIFDP 1375
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1294 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1352
Score = 40.8 bits (94), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1697 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 1754
>gi|393246311|gb|EJD53820.1| ribonuclease III [Auricularia delicata TFB-10046 SS5]
Length = 1227
Score = 140 bits (352), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 220/496 (44%), Gaps = 43/496 (8%)
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSS 985
LK+ QPL+ + L N L SE + ++ + PE+C +I S +
Sbjct: 634 LKNENQPLIEVARIPGLVNRLFPASRAISEEIDPPKF---IIPEVCARFVIPAS--TFET 688
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
L+P + R+E+ L+ L H + E+ +LL A+++ +RLE+L
Sbjct: 689 AYLVPCCLRRIEDTLLVKLLNHQFFDN-----EIEERLLLSAISSPSLCGDLDYQRLELL 743
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK+ LF+ T E EL R N +N L + A R L +I +PF
Sbjct: 744 GDSVLKFLASAALFVRKPTSSESELHLGRQNIFSNRALTQAARRAGLPPFILTKPFSIKS 803
Query: 1106 F----FALGRRCPRICSKE----TERTIHSQYDGRAPDDLNAEVRCSK----GHHWLHKK 1153
+ + R + S+E E+ + +A+ R + HW+ +K
Sbjct: 804 WIPPNYDFDRAPAKPLSEEDALIPEKVAAYKLAREREQKADAQARVKRQQDASEHWIGEK 863
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMA 1213
TIADV EA++GA G K + ++++ N I +S + L +
Sbjct: 864 TIADVTEAILGAAFLTGGKNLVLRAAKRLAVKLQDYVDVKAN--IPGRSHVQLRCE-SLE 920
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
+E LLG L+ QA H + L YQRLEFLGDA+LD L+ Y++ Y KL
Sbjct: 921 HVERLLGRPIQRPHLVAQALTHSVIDSSLATSYQRLEFLGDAILDLLVVRYIWR-YEKLD 979
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS------ST 1326
P LT L++ +V+N A V V +K +I S L I+NYV + + +
Sbjct: 980 PEALTLLKAAMVSNSTLAAVCVQCGLHKHIIHASPSLGVKIDNYVKALHSARDKERALAQ 1039
Query: 1327 REVKEGPRC------PKVLGDLVESSLGAILLDSGFNLNTV----WKIMLSFLDPILKFS 1376
EV++ + PK L DL+ES LGA+ + + + + ++ F D ++ S
Sbjct: 1040 SEVRQPVQYWLELEHPKPLSDLIESLLGALFISENYAIAPLEAFFENVLRLFYDEHIRLS 1099
Query: 1377 NLQLNPIRELLELCNS 1392
+ +P L ++ S
Sbjct: 1100 SCSSHPTTTLFKMLES 1115
>gi|281339672|gb|EFB15256.1| hypothetical protein PANDA_009266 [Ailuropoda melanoleuca]
Length = 1917
Score = 140 bits (352), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 280/661 (42%), Gaps = 115/661 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIYKV----------- 580
D+ D IK+F EED + +I+ S + E I V
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEPDIEPVVDDDDVFPPYV 615
Query: 581 ---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEPMLFSSDSDS 693
IVG P S + A++ L E LHK+G L+D+L+P +E E+E L + S
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 694 YEGEGSRGELHEMLVPAV----LRQSWTKSQYPVRLNFYFMQF---IPD----------P 736
G + + AV LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAVSIECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYP 795
Query: 737 ADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV-- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 PEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQ 852
Query: 794 -----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSS 844
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 YIFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKS 904
Query: 845 PV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVF 898
G P +++ P L+ D +++++ ++ + FY V ++
Sbjct: 905 EARIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYT 953
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED----- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 DLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKAL 1013
Query: 954 --SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
S + + + ++ L PELC + I S + LPSI++RL LL A EL
Sbjct: 1014 PLSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEEL 1071
Query: 1006 K 1006
+
Sbjct: 1072 R 1072
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 80/307 (26%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E +SQ N
Sbjct: 1559 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQQKN 1618
Query: 1196 ICISSKSFLPLSAS---------LDMATLEI---------------------------LL 1219
+ S S P SA+ L+ L+I +
Sbjct: 1619 L---SGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKI 1675
Query: 1220 GHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LT
Sbjct: 1676 NYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLT 1735
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR--- 1334
DLRS LVNN FA++A ++K + S L I+++V + + + + + R
Sbjct: 1736 DLRSALVNNTIFASLA----YFKAV---SPELFHVIDDFVQFQLEKNEMQGMDSELRRSE 1788
Query: 1335 ----------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNP 1382
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P
Sbjct: 1789 EDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSP 1848
Query: 1383 IRELLEL 1389
+RELLE+
Sbjct: 1849 VRELLEM 1855
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRSGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VLVM + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKEKWSQEFMKHQVLVMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1298 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1357
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1358 LYRLGKKKGLPSRMVVSIFDP 1378
Score = 45.1 bits (105), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1297 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1355
>gi|449280710|gb|EMC87946.1| Endoribonuclease Dicer [Columba livia]
Length = 1922
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 273/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + SE +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D + ++ + ++RYC++LP D F + PK + T + LP N+P+
Sbjct: 616 LRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTEAD--------SAYCVLPLNVVDDSSTLDIDFKFMEDIEKSE 904
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
+ K +P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARTGIPSTQYTKEMPFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 139 bits (349), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 147/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ-------VEFEAS--QVTNICISSK-- 1201
K+IAD VEAL+G ++ G +AA FL +G++ ++E + C S +
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGALCATRENCNSEQKN 1616
Query: 1202 ----SF---------------------LPLSASLDMATLEILLGH--------------Q 1222
SF +P D E L H
Sbjct: 1617 PSPNSFSASVANSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYS 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 17/242 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC--DWEKEIDQYEVLVMIPQILLYCLYHRF 174
V QQ + KV + + ++S W +E +++VLVM + L L + +
Sbjct: 105 QVAQQVSAVRTHSDLKVGEY-SSLEVIESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEY 163
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMK--DFYKPDIMKVPRIFGMTASPVVGKGASA 232
+ + I LL+FDECH A +H Y +IMK + Y PRI G+TAS + GK A
Sbjct: 164 LSLSNINLLVFDECHLA--IQDHAYREIMKICEGYP----SCPRILGLTASILNGKCDPA 217
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+ L + I LE +L + + D L+ + S P V GP D S Y ++L
Sbjct: 218 E--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPY-TDKSGLYGRLLKEL 274
Query: 293 AE 294
E
Sbjct: 275 DE 276
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1298 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1357
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1358 LYRLGKKKGLPSRMVVSIFDP 1378
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1297 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1355
Score = 42.7 bits (99), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1808 MGDIFESLAGAIYMDSGM 1825
>gi|405973601|gb|EKC38303.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 948
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 247/558 (44%), Gaps = 87/558 (15%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ+EL + ++E +N I+ TG GKTH+A+ +I I+ + IFL AL
Sbjct: 286 RSYQMELARPSLEGKNAIIVAPTGSGKTHVALCIIKHHMETIKSIRHPKVIFLVEQSALA 345
Query: 119 QQQAKVIEESIGFKVRTFCGGSKR---LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ K + FKV+ G S+R +KS +W I + ++LV+ QILL L +
Sbjct: 346 EQQGKQCMTYLPFKVKVITGESQRNERMKSLNEW---IARRDLLVVTAQILLNALRDGIV 402
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFY------KPDIMKVPRIFGMTASPVVGKG 229
+ +L++FDECHH NH Y IM + + +P + G+TAS VG+
Sbjct: 403 SVTDFSLMVFDECHHTN--DNHSYNMIMNRYLDLKLQDRERAKTLPMVLGLTASVGVGR- 459
Query: 230 ASAQANLPKSINSLENLLDAKVYS--VEDAEDLESFVSSP---VVRVYQ----YGPVIND 280
A+ + I + +DA+ + +E+ +LE +V P + RV + P +
Sbjct: 460 ATMIVEAKRHIEKIMANMDAESIATVIENTTELEKYVIIPKQNLERVQKLETVLKPPLEK 519
Query: 281 TSSSYVTCSEQLAEIKREQYISALSR---KLHDHQSLR--NTTKQLNRLHDSMKFCLENL 335
S Y Q++S L R K+++ +R T ++ L++ E+
Sbjct: 520 GSDQYT------------QWVSMLWRETAKINNKVVVRFFETCRKYLDLYNKALIIYEDA 567
Query: 336 GVCGALHASYIL---------LSGDETMR--NELIEAEGNTIDDSLCRFASQASEVFAAI 384
AL +YI + D+T R + + +T++D C
Sbjct: 568 RPSDAL--AYIFKEFKKWKHTVKADDTERIMRRMFDEIKSTLED--CSIDP--------- 614
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL 444
C R+ ++L +++ E F R+I VFV A+A+ +
Sbjct: 615 CHRNPKLTNLR--DIIGEHFRENPGARVI---------------VFVKTRELAKAMETYM 657
Query: 445 QNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQT 502
K L+ + VGV A ++ M++ LE F+ G +++AT V EEGLDI
Sbjct: 658 NETKELSILKPIQFVGVQANRENGGMTKVQQDETLELFKEGNHKVIIATSVAEEGLDILK 717
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM 562
C LV+R+D + +QSRGR R S Y L S N + L + E MNR I
Sbjct: 718 CSLVVRYDHVTNEIAMVQSRGRGRSENSIYVVLA-SENSKTLKREEGNRIREAMMNRAI- 775
Query: 563 DRTSSDAFTCSEERIYKV 580
D+ ++ T E + +V
Sbjct: 776 DKVRAELSTDEEAVLRRV 793
>gi|320590575|gb|EFX03018.1| rnase3 domain containing protein [Grosmannia clavigera kw1407]
Length = 1246
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 231/521 (44%), Gaps = 92/521 (17%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDIGSS 985
QP++ A+ + RNLL +R + D+ ++C LKI +I +
Sbjct: 648 QPVVEAEIITNRRNLLDDRV-----------HLDNPEQKICFLVLETLKISPLPAEIVAM 696
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTE----KCQERFSL-- 1039
+P I+HR+E+ L+A+E ++ + E+ L+A+T + Q+ L
Sbjct: 697 AFNIPVIIHRIESTLIALEATSVIGI-----PRIRPELALEAVTKDCDNPDAQDETPLNF 751
Query: 1040 --------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
ERLE+LGD+FLK A LF L DE E +R + N NL A
Sbjct: 752 QAGMGRNYERLELLGDSFLKLATSIALFTLVPDKDEFEYHVQRMCMICNRNLFNNALDMK 811
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGR--APDDLNAEVRCSKG--- 1146
L+ YIR + FD + P + + T + Y AP N V KG
Sbjct: 812 LEEYIRSREFDRTWY-------PPTIEEAGKSTDNDNYSDNTPAPPSQNGLV-LQKGKRT 863
Query: 1147 ----HHWLHKKTIADVVEALVGA-FID-------DSGFKAATAFLKWIGIQVEFEASQVT 1194
HH L KTIADV EA++GA ++ D +A +A +K ++ A T
Sbjct: 864 QLPTHHPLGDKTIADVCEAMIGAAYLTTYEERNFDLAVQAVSAVVKSKLHPMQSYAEYYT 923
Query: 1195 NICISSKSFLPLSAS-LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLE 1249
P +A+ L MA ++ LG+QF LL AF HPS+ R+ YQRLE
Sbjct: 924 AYKPPGWQLCPSTAAQLHMAVSIAKDLGYQFRFPRLLRSAFTHPSYPRIYENLPSYQRLE 983
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL 1309
FLGDA+LD I YL+ + P LT+ + +V+NQ A ++V F++ ++ S +
Sbjct: 984 FLGDALLDMAIVDYLFHKFSNKDPQWLTEHKMAMVSNQFLAFLSVSLGFHRHILSFSGEM 1043
Query: 1310 SETINNYVDYMITP---------SSTREVKEGPR--------CPKVLGDLVESSLGAILL 1352
+ I YV + + R E R PK L D++E+ +GA+ +
Sbjct: 1044 RKQILEYVTKVEEERVRAESEAVEAGRPASEFARDYWVHVTHPPKALADVLEAYVGALFV 1103
Query: 1353 DSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSY 1393
DS ++ + +LKF N + P + + L +++
Sbjct: 1104 DSEYDYHGT----------VLKFFNTHVQPYFKDMSLYDTF 1134
Score = 129 bits (323), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 21/208 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS--------ICIFL 111
R YQ+EL +KA ++N+I L TG GKT IA LL L H+I K + + FL
Sbjct: 125 RDYQVELFEKAKQKNVIAVLDTGSGKTLIAALL---LRHMIDKELEDRSQGKPARLSFFL 181
Query: 112 APTVALVQQQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEIDQYEVLVMIPQILLYC 169
VALV QQ V+E ++ V F G L+ S W+ + +V ILL C
Sbjct: 182 VDKVALVFQQHAVLECNLSHSVAKFSGDKVDLRWTSKSFWDDVLRDNMAIVCTADILLKC 241
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASPVVGK 228
L+H ++ ME I LLIFDE HH K NH YA+I+KDFY + P+IFGMTASPV
Sbjct: 242 LHHSYVCMEQINLLIFDEAHH--TKKNHAYARIIKDFYAHECPSNRPKIFGMTASPV--- 296
Query: 229 GASAQANLPKSINSLENLLDAKVYSVED 256
A+ N+ ++ LE LL +++ +V +
Sbjct: 297 --DARTNIAQAAEELEALLHSEIATVSN 322
>gi|195996287|ref|XP_002108012.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
gi|190588788|gb|EDV28810.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
Length = 915
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 178/383 (46%), Gaps = 49/383 (12%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S MLL+ALT+ + F+ ERLEILGD++LK+ F + + EG ++ R+ V+
Sbjct: 467 SVSMLLQALTSLSADDFFNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVS 526
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
NS+L + + L +Y + PF Q+ G C R + + + DG D
Sbjct: 527 NSHLSRTSKLKGLTLYQFNTPFKLKQWLPPGFTCIRNNANLVANNMLT--DGSKQRD--- 581
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE----FEASQVTN 1195
+ K I+D VE LVG + SG A L WIG+ ++ E + N
Sbjct: 582 ---SESFKQVMSVKNISDTVEGLVGVYSLASGPVDAARLLPWIGLDIDPNVLIEKDKSVN 638
Query: 1196 ICI-SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDA 1254
I ++ + LS+ + T +QF + L AF H S YQRLE+LGDA
Sbjct: 639 FEIPTTDEDIQLSSCILRNT-----DYQFNNFYWLRIAFTHSSV--ASENYQRLEYLGDA 691
Query: 1255 VLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFY---------KFLIFD 1305
+L+YL+ ++Y P PG+++ +S++ NQ F+ +A+ FY K I D
Sbjct: 692 ILEYLLIEFVYCRKPYFGPGKISHFKSVMTRNQTFSLIAIAFQFYTHIRCHSKLKLDIMD 751
Query: 1306 S--NVLSETINNYVD-------------YMITPSSTREVKEGPRCPKVLGDLVESSLGAI 1350
S N ++N+ D Y + S+ + + PKV D+ E+ + AI
Sbjct: 752 SIQNFKEILLDNHQDDHQPDIGHFANLAYQLYTSNRYQ-----KLPKVCADVFEAFIAAI 806
Query: 1351 LLDSGFNLNTVWKIMLSFLDPIL 1373
LD G L TVWK++ + IL
Sbjct: 807 YLDCGKKLRTVWKVVYKMVQRIL 829
>gi|326922819|ref|XP_003207642.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Meleagris gallopavo]
Length = 1001
Score = 139 bits (350), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 145/542 (26%), Positives = 249/542 (45%), Gaps = 80/542 (14%)
Query: 54 DPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICI 109
+P I R YQ+E+ K A+ ENII+ L TG GKT +AV + + HL +K + S I
Sbjct: 296 EPDLILRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKD--HLDKKKKASEPGKVI 353
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQI 165
L V LV+Q + +E F R + G LK + + + + +V++ QI
Sbjct: 354 VLVNKVPLVEQHLR--KEFNPFLKRWYQVIGLSGDSELK--ISFPEVVKRNDVIICTAQI 409
Query: 166 LLYCLYH-----RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI--------- 211
L L + + + +L+I DECHH Q + Y IM+ + K I
Sbjct: 410 LENSLLNATEEDEGVHLSDFSLMIIDECHHTQKEG--VYNNIMRRYLKDKIKNRKQAKEN 467
Query: 212 ---MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA-KVYSV-EDAEDLESFVSS 266
+ P+I G+TASP VG GA ++ + I + LDA ++ +V E A L++ V
Sbjct: 468 KPLIPQPQILGLTASPGVG-GAKSRPKAEEHILKICANLDACRIMTVTEHASQLKNQVKD 526
Query: 267 PVVRVYQYGPVINDTSSSYVTCSEQLAEIKR---------------EQYISALSRKL--H 309
P + D + E + +I++ EQ++ R+
Sbjct: 527 PFKKTVIADDKRRDPFRERII--EIMQDIQKYCQLYPKSEFGSQPYEQWVIREERRAAKE 584
Query: 310 DHQSLRNTTKQLNRLHDSMKF--CLENLGVCGALHASYILLSGDETM----RNELIEAEG 363
+ + R + L + +D+++ + + L+ Y L +T E + ++
Sbjct: 585 EKRKERVCAEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRKKTAGSDDDEEPLVSKK 644
Query: 364 NTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIG-ILSTFRLQ 422
+ D+ L + + + R K + ++KL++L ++ F
Sbjct: 645 DETDEFLMGLFHEKKKQLKELAR--------------KPEYDNEKLMKLRNTLMEEFTKT 690
Query: 423 QHMKCIVFVNRIVTARAL-SYILQNLKF-LASWRCHFLVGV--NAGLKSMSRNAMKSILE 478
+ + I+F +A AL +I+ N KF + H+L+G N+ K M++N + +++
Sbjct: 691 EESRGIIFTKTRQSALALYHWIMDNPKFEEVGIKAHYLIGAGHNSETKPMTQNEQREVID 750
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KFR G +NLL+AT V EEGLDI+ C +VIR+ L + +Q+RGRAR +S YA + S
Sbjct: 751 KFRGGSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASS 810
Query: 539 GN 540
G+
Sbjct: 811 GS 812
>gi|356552945|ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
Length = 345
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 53/388 (13%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
+E +L ++F ++ LL +A H SF G Y+RLEF+GD VL I++YL+ YP L PG
Sbjct: 9 VENILRYRFRNKKLLEEALTHSSFLD-GVSYERLEFVGDPVLSLAISNYLFLAYPDLDPG 67
Query: 1275 QLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR 1334
QL+ LR+ V+ + A VAV ++F+ + L + + +VD + + +
Sbjct: 68 QLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPLVDKVERFVDAVKLEINPVAHGGSVK 127
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNL--QLNPIRELLELCNS 1392
PKVL D+VES AI +D F+L T+W IM L+PI+ L Q P+ L E+C
Sbjct: 128 APKVLADVVESVAAAIYVDVNFDLQTLWVIMRGVLEPIVTPDALEKQPQPVTMLYEMCQK 187
Query: 1393 YDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGY 1452
+ ++G +A+ V G+ F+++ ++ SQ+ +KL+AA
Sbjct: 188 KGKQVDIKPSREGDLSVAKVFVDGE----FVASASS-----------SQKDHAKLEAAKI 232
Query: 1453 VPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSL 1512
L ++ S+ K A + + AAD+N
Sbjct: 233 A--LGKLAHLVPSTDKKSATNMKLN------FAADEN----------------------- 261
Query: 1513 TTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECI 1572
G + +++L ELCA W P + K+ G SH K F V+I + I++
Sbjct: 262 --GTWVVEAPKNKLRELCAVKKWPIPEYIIEKDSGPSHEKKFV--CAVQIPTADGILQMS 317
Query: 1573 GEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
G+ +++ K A AA M+ L++ YL
Sbjct: 318 GDEKSRVKDAENSAASLMIRALQQYNYL 345
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L +ALT + S ERLE +GD L A+ +LFL + +D G+L+ R+ V+
Sbjct: 21 KLLEEALTHSSFLDGVSYERLEFVGDPVLSLAISNYLFLAYPDLDPGQLSALRAANVSTE 80
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV 1141
L ++A R L ++R P + K ER + D + E+
Sbjct: 81 KLARVAVRIGLHRFVR-------------HSAPPLVDK-VERFV---------DAVKLEI 117
Query: 1142 R-CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
+ G K +ADVVE++ A D F T ++ G+
Sbjct: 118 NPVAHGGSVKAPKVLADVVESVAAAIYVDVNFDLQTLWVIMRGV 161
>gi|240275433|gb|EER38947.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
Length = 896
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 124/232 (53%), Gaps = 25/232 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL +KA NII L T + P + I FL +V LV
Sbjct: 94 REYQLELFEKAKAANIIAVLDTADRASG--------------NPPR-ISFFLVDSVTLVY 138
Query: 120 QQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
QQA V++ +I + FCG + L S WEK + ++V ++L CL FI+ME
Sbjct: 139 QQAAVLKANIDQNIDKFCGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRSFIRME 198
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASAQANL 236
I LLIFDE HHA K HPYA+I+KDFY +P+ K P+IFGMTASPV A+ ++
Sbjct: 199 QINLLIFDEAHHA--KKEHPYARIVKDFYLRRPETQKRPKIFGMTASPV-----DAKVDV 251
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
K+ +LE LLD+++ + + + L ++ P +++ Y + + + C
Sbjct: 252 AKAAKNLETLLDSQIATASNLDALRQAIARPTEQIWVYDKLDATSETDLYKC 303
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR-- 559
T C+V FDL T+ +IQSRGRAR S YA +V+ N I+ + E M R
Sbjct: 419 TKCIV--FDLSLTMIQYIQSRGRARHSNSIYAHMVERDNLIHASCIQEAQRAEHIMRRFC 476
Query: 560 -----EIMDRTSSD--AFTCSEERIYK---VDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
+ + R SSD +ER YK V S+GA ++ + +L Y S L +++
Sbjct: 477 EALPEDRIIRGSSDDLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKET 536
Query: 610 NPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
+P+ ++ G +C ILP +P + G P + A++ A + L K G L+
Sbjct: 537 SPQVNYFIERIDGAFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILD 596
Query: 670 DYLL 673
D+ L
Sbjct: 597 DHFL 600
>gi|167046022|gb|ABZ10542.1| dicer-like protein B [Placozoa sp. DMJ-2008]
Length = 357
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 177/368 (48%), Gaps = 37/368 (10%)
Query: 1025 LKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLL 1084
LKALT + + F+LE LE LG ++LKYAV FL + EG+L+ +S V+N NL
Sbjct: 1 LKALTLARANDDFNLETLEFLGGSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60
Query: 1085 KLAARNNLQVYIRDQPFDPCQF-----FALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
++ + L YI D F++ ++ I +E T++ R
Sbjct: 61 QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPTQKL 120
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFL-KWIGIQVEFEASQVTNICI 1198
+ +C IADV+EAL+G + + G +A F+ +GI+V + + +
Sbjct: 121 KNKC-----------IADVMEALLGGILLELGENSANNFITNNLGIKVGRLSHNIAKLDD 169
Query: 1199 SS-KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLG---GCYQRLEFLG 1252
+ K + + ++ LE +LG+ F R LL+ A H ++ NR+ CYQRLEFLG
Sbjct: 170 DARKEISKIYNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLG 229
Query: 1253 DAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSET 1312
DA+L Y++ + Y KP L D + N++ A + + +K+ ++S L
Sbjct: 230 DAILQYIVVRHCYHANNNYKPADLHDFVEASLQNESLAAMTMVYGIHKYFFYNSPSLFSQ 289
Query: 1313 INNYVDYMITPS------STRE--------VKEGPRCPKVLGDLVESSLGAILLDSGFNL 1358
IN + + T ST E +K+G PK LGDL ES +GAI +D G ++
Sbjct: 290 INQLLQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFESLIGAIFIDCGRSI 349
Query: 1359 NTVWKIML 1366
V ++L
Sbjct: 350 EVVNDLVL 357
>gi|302694007|ref|XP_003036682.1| hypothetical protein SCHCODRAFT_102832 [Schizophyllum commune H4-8]
gi|300110379|gb|EFJ01780.1| hypothetical protein SCHCODRAFT_102832, partial [Schizophyllum
commune H4-8]
Length = 1489
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 213/478 (44%), Gaps = 74/478 (15%)
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENL-----LVAIELKHLLSASFPEGAEVSAE 1022
PELC KI + + ++L LLPS++ R++ + L AI H+ ++ +
Sbjct: 948 PELC-FKITIPASVMRTAL-LLPSVLTRIDEIFLVKELNAIHFNHI----------IAED 995
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLL-HDTVDEGELTRRRSNAVNNS 1081
+L ALTT + ERLE+ GDAFLKY HLF++ H EG+L R ++N
Sbjct: 996 LLHAALTTPSAGFDRNYERLELYGDAFLKYLASLHLFVMSHHNDSEGKLHAARRPLISNQ 1055
Query: 1082 NLLKLAARNNLQVYIRDQPF-----DPCQFFALGRRCPRICS----KETERTIHSQYDGR 1132
L++ + L ++ +PF P F R P S KE E+ ++
Sbjct: 1056 KLMECSLALGLPSFVIGKPFVIRFWGPANF----RMNPPGGSAEKGKEKEQGKVAETPPP 1111
Query: 1133 APDDLNAEVRC-----------------SKGHHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
A D + A + L K +ADVVEA++GA +G
Sbjct: 1112 ASDAVGANQGEGGGGKKRRKKKKGEPNDGQIQQMLSDKALADVVEAILGAAHLSAGRDGG 1171
Query: 1176 TAFLKWIGIQV--------EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
K +G+ V +F+A + S+ SFL ++D ++ ++G +
Sbjct: 1172 LQVAKALGLPVAKNADIWDDFKAQVSMHATPSAVSFL-RPGTID--GVQSVIGQKLNKPE 1228
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
LL A H + + G Y+R+EFLGDA+LD+ + Y+Y Y + P LT L+S +V N
Sbjct: 1229 LLALALTHANNSSPLGNYERIEFLGDALLDFQVVEYVYRKYTQQPPSVLTLLKSAMVGNS 1288
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITPSSTREVKEGPRCPKV 1338
A + + Y+ L S+ + ++IN Y+ +Y RE G
Sbjct: 1289 PLAAICAESGLYRHLHQKSHQIQQSINTYLTALQKAKQKEYAAADDDLRE--RGQYWFDA 1346
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI----LKFSNLQLNPIRELLELCNS 1392
L D+VES +GAI + V ++ FL P ++ + L ++P + LLEL S
Sbjct: 1347 LSDIVESIVGAIYISDDLEWTGVQQLFKHFLQPFYEKHIRMNTLAVHPTKILLELVQS 1404
>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
Length = 1442
Score = 138 bits (347), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 160/334 (47%), Gaps = 45/334 (13%)
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-RCHFLVGVN 462
+ + KL LI IL R ++FV + A AL+++L + L W + LVG
Sbjct: 370 WLTPKLKILISILEANRADD-FSALIFVEQRQVASALAWLLPLVPELRDWVKAAALVGHG 428
Query: 463 AGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
G ++ M+ A +S + FRSG +NL++AT V EEGLD Q C LV+R D P+T+
Sbjct: 429 DGSRAGFEGSGMAHAAQRSTVRNFRSGSINLVIATSVAEEGLDFQACKLVVRLDAPQTMV 488
Query: 517 SFIQSRGRARMPQSEYAFLVD-SGNQRELDLIKNFSKEEDRMNREIMDRTSSD------- 568
++QSRGRAR S Y L D G +R + F E + R I R S +
Sbjct: 489 GYLQSRGRARKHDSAYVVLTDPEGAKR----YRGFRGAEPHLRR-IYQRISEEEAQQDGE 543
Query: 569 ----AFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFN-PKPKFYYFDDLGG 623
+ Y V S+GA ++ + LLH +CS+L D F P P+F+ G
Sbjct: 544 MDVEEEEDVDNERYVVKSTGAVVTPSTAIGLLHLWCSQLEVDRFTKPPAPEFHI---TGK 600
Query: 624 TICHIILPA-------NAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQE 676
+C I P + PIH G + + + A++ A ++ LHKL +DYLLP +
Sbjct: 601 YMCKISAPPCILNPALSGPIH---GPLKKTRDGARRAAAFLFVQKLHKLEIFDDYLLPFK 657
Query: 677 DNATEDEPMLFSSDSDSYEGEGSR-GELHEMLVP 709
+++ + + S +G R GEL + + P
Sbjct: 658 KRSSKADDL-----SQRLDGTLRREGELFDTITP 686
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 183/378 (48%), Gaps = 18/378 (4%)
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
Q F +RLE +GD+ LK ++ HLF+ + EG+L+ + + V+N+NL+++ ++ L
Sbjct: 989 VQAGFDYQRLETIGDSVLKVSMCTHLFIKYQGHHEGQLSAMKDSVVSNANLMRVGRQSPL 1048
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH---W 1149
++ P + P I + + + + D + SKG
Sbjct: 1049 SRFLITGSM-PTRRTWSPPASPTISETQDDSGEQDDSNEQKDDSNEQKENDSKGEFEKTS 1107
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI----QVEFEASQVTNICISSKSFLP 1205
H K++AD E+ +GA G +AA + +G+ + + ++ + KS +
Sbjct: 1108 FHTKSLADCTESTLGATYLSRGVEAALEVGEALGLPLGGTTPWHLRREVDV-FARKSEI- 1165
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYL 1264
++ A +E LG++F + L+ +AF H +++ G Y RLEFLGD++ D + ++
Sbjct: 1166 ---TMLFAPVEEKLGYKFKNASLVAEAFTHTAYDLSQGPSYNRLEFLGDSLFDLYVVKFM 1222
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--IT 1322
Y +PK+ PGQ++ RS LVN F +AV +K ++ S L + + ++ + I+
Sbjct: 1223 YLKFPKMTPGQMSWARSRLVNASTFGKLAVGLELHKHILTSSANLQKAVASFAQEVEEIS 1282
Query: 1323 PSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN--LQL 1380
++ PK + D+ E+ GAI +DS FNL ++ + + I+++ +Q
Sbjct: 1283 LEEILQICWKIDAPKAISDVFEAIFGAIYVDSSFNLELTFEHIHRVMANIMEYVTPVMQG 1342
Query: 1381 NPIRELLELCNSYDLDLQ 1398
+P EL+ S + Q
Sbjct: 1343 DPTSELVRWVASQGCEAQ 1360
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ----KSICIFLAP 113
I R YQ E+ ++A+ EN+I + TG GKT IAV+L+ + L +P K + +FL
Sbjct: 19 IPRLYQQEIFQRAVNENVICAMDTGSGKTQIAVMLLKHIMSL--RPADSNPKKVAVFLVA 76
Query: 114 TVALVQQQAKVIEESIGFKVR----------TFCGGSKRLKS----HCD---WEKEIDQY 156
+V L +QQ +E + V + G K + + D W K +
Sbjct: 77 SVPLAEQQGDFLESQLPLHVNVRPVFLLLAGAYADGQKFYGAMGVDYWDRERWAKAFAES 136
Query: 157 EVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP-DIMKVP 215
+V+VM Q+ L H A D+ HH NH YA+IM+ Y + + P
Sbjct: 137 DVMVMTAQVFHDLLNH--------AHWSIDKAHHCN--KNHVYAQIMRTHYHHCPVSERP 186
Query: 216 RIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVED 256
RIFGMTASP+ AQ S+ L+ +DAKV +V+D
Sbjct: 187 RIFGMTASPIFNIRNPAQ-----SLAQLQETMDAKVLAVKD 222
>gi|315258243|gb|ADT91700.1| dicer-like protein 2 [Nicotiana attenuata]
Length = 239
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 133/250 (53%), Gaps = 26/250 (10%)
Query: 1073 RRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGR 1132
+++ ++N+ L KL + +IR +PFD + G +SQ
Sbjct: 2 KKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGD--------------NSQVQNF 47
Query: 1133 APDDLNAEVRC-SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEAS 1191
+ L V+ S+G + K +ADVVEAL+GAF+ G AA +F+KW+G+ ++F
Sbjct: 48 DEELLMPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGVDIDF--- 104
Query: 1192 QVTNICISSKSFLPLSAS--LDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQR 1247
+ + P++A +++ LE LL ++F LL++A H S+ + CYQR
Sbjct: 105 ----VDAPTPRHFPMNAEKLVNVRYLESLLDYKFHDPSLLVEALTHGSYMLPEIPRCYQR 160
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSN 1307
LEFLGDAVLDY +T++LY YP L PG +TDLRS VNN+ +A AV +K ++ S
Sbjct: 161 LEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILHASQ 220
Query: 1308 VLSETINNYV 1317
L I N V
Sbjct: 221 DLQRQIVNTV 230
Score = 43.5 bits (101), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+RLE LGDA L YAV HL+ + + G +T RS +VNN + A + L +I
Sbjct: 159 QRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHI 215
>gi|301607421|ref|XP_002933320.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Xenopus (Silurana) tropicalis]
Length = 998
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 153/552 (27%), Positives = 246/552 (44%), Gaps = 101/552 (18%)
Query: 55 PKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK---SICIF 110
P+ R YQ+E+ K A+E +NII+ L TG GKT +AV + E HL ++ ++ + I
Sbjct: 293 PQITLRNYQMEVAKPALEGKNIIICLPTGSGKTRVAVYITRE--HLCKRREEGRLAKAIV 350
Query: 111 LAPTVALVQQQAK-----VIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQI 165
L V LV+Q + +++ ++V G S+ S + K + +++V++ QI
Sbjct: 351 LVNKVPLVEQHYRREFYPFLKDH--YQVTKISGDSQLKNS---FHKVVQEHDVVICTAQI 405
Query: 166 LLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------ 213
L L +++ +L+I DECHH Q + Y IM + K +
Sbjct: 406 LENSLIQAAEDEEEGVQLSDFSLIIIDECHHTQ--KDAVYNNIMIRYIKKKMQNKRNSKM 463
Query: 214 ------VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSS 266
+P+I G+TASP VG + + + + N+ K+ +V E+AE L V
Sbjct: 464 EKAQVPLPQILGLTASPGVGGAKNIKKSEEHILRICANMDAFKIMTVQENAEQLRKQVKD 523
Query: 267 P----------------------VVRVYQYG---PVINDTSSSY---VTCSEQLA--EIK 296
P + ++ +Y P + S SY V +++ A E K
Sbjct: 524 PYKEVKISDEKKKNPFGDKLKEIMGKIEEYSKLYPTSDHGSQSYEQWVIQTDKTAAKEGK 583
Query: 297 REQYISALS-RKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS-GDETM 354
R++++ A RK +D + +T + + L KF E ILL+ G E +
Sbjct: 584 RKEHVCAEHLRKYNDALQINDTIRMTDSLIHLRKFYEEE-------KKRKILLNEGSEHV 636
Query: 355 RNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLI- 413
IE + D F E+ A + K P + + L +
Sbjct: 637 APLNIEETDRFLID---LFYDNEKELTA----------------IAKNPKYENENLYALR 677
Query: 414 -GILSTFRLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSM 468
+L F + I+F +A AL+ +I N KF R +L+G N+ K M
Sbjct: 678 SSLLEEFTRNGQARGIIFTKTRQSAVALNQWISDNEKFTEVGIRSSYLIGAGHNSDFKPM 737
Query: 469 SRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP 528
++N K I+ KF +GELNLLVAT V EEGLDI+ C +VIR+ L + +Q+RGRAR
Sbjct: 738 TQNEQKQIIHKFSTGELNLLVATSVAEEGLDIKECNVVIRYGLVTNEIAMVQARGRARAD 797
Query: 529 QSEYAFLVDSGN 540
S Y + S +
Sbjct: 798 DSSYVLVAPSSS 809
>gi|238499729|ref|XP_002381099.1| dicer-1, putative [Aspergillus flavus NRRL3357]
gi|220692852|gb|EED49198.1| dicer-1, putative [Aspergillus flavus NRRL3357]
Length = 605
Score = 137 bits (346), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 210/461 (45%), Gaps = 57/461 (12%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
+QP+L + + RNLL K+ D+E F + P L+I ++I +S
Sbjct: 48 QQPVLEVELVRLRRNLLD--KMTDTEKDVETRCFVCIEP----LRISAIPEEIAASCLAF 101
Query: 990 PSIMHRLENLLVAIELKHLLSAS---------FPEGAEVSAEMLLKALTTEKCQERFSLE 1040
P+I++RL+ L+A+E + L S F + ++ + E ++ + ++ + + E
Sbjct: 102 PAIINRLDAYLIALEGCNTLDLSVKPAYALEAFTKDSDNTEEHRVQQIHVQRGMGK-NYE 160
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
RLE LGD FLK A LF+ + DE + R + N NL A + L YIR +
Sbjct: 161 RLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYIRSRG 220
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVE 1160
F ++ G T+ D R ++AE + H L +KT+ADV E
Sbjct: 221 FSRHTWYPDG------------LTLLHGRDHRK--KVSAESK-----HALREKTVADVCE 261
Query: 1161 ALVGAFIDDSGF--------KAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSASLD 1211
AL+GA + G KA TA + + A ++ + ++ P LD
Sbjct: 262 ALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSSYMLPKYQTQSPDGYELD 321
Query: 1212 MA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSV 1267
+ +E LG++F + LL AF HPS+ CYQRLEFLGD++LD + L+
Sbjct: 322 LGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYR 381
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
YP P LT+ + + +N+ +AV + L SN L I +Y + + +
Sbjct: 382 YPDKDPQWLTEHKMAMASNKFLGALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENES 441
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
+ V + P PK L D+VE+ LGA +DS F V
Sbjct: 442 QGAVDYWLVTKDP--PKCLPDMVEAYLGAAFVDSDFQFRVV 480
>gi|358332040|dbj|GAA50766.1| dicer-like protein 1 [Clonorchis sinensis]
Length = 774
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 183/385 (47%), Gaps = 55/385 (14%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHD-TVDEGELTRRRSNAVNNSN 1082
LLKA T + +LERLE +GD+ L+ ++ DE +LT +RS V+N+N
Sbjct: 379 LLKATTLLGAADSVNLERLEFIGDSLLQLITTLQVYQNSSLQADEQQLTNKRSVLVSNAN 438
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L + R Y +PFD F T+ SQY + PDD V+
Sbjct: 439 LYSIVVREQWYRYCTTRPFDIRDLFI-----------PPCYTLKSQY--QEPDDPRIYVK 485
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------EFEAS----- 1191
L K++AD++EAL+G F+ G + A L+ GI F +S
Sbjct: 486 -------LTDKSLADMIEALLGCFLQCIGIRGACGLLQRFGISFMDCINDTFNSSASMWR 538
Query: 1192 -----------QVTNICI-SSKSFLPLSASLD--MATLEILLGHQFLHRGLLLQAFVHPS 1237
Q++ + I S++ A LD ++ L+ LG+ F ++ LL +A H S
Sbjct: 539 CFFQDAVCLTNQLSKLTIGSARGDEATKAELDAGISILQGRLGYVFKNQALLHEARTHSS 598
Query: 1238 FNRLGG--CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
++ L CYQRLEFLGDAVL Y++++ L+ +P PG LT+ RS++VNN A V VD
Sbjct: 599 YSSLKPTVCYQRLEFLGDAVLGYVVSNDLFKRFPDYDPGMLTNHRSLIVNNLVLARVLVD 658
Query: 1296 QSFYKFLIFDSNVLSETINNYVDYMITP-SSTREVKEGPRCP------KVLGDLVESSLG 1348
+ + + L ++ + +S E++E + K+LGD+ ES +G
Sbjct: 659 LKLHDGIRHNIPSLPSMVDKLRSVRLADVTSLSELREKIQTNITASPMKILGDVFESLIG 718
Query: 1349 AILLDSGFNLNTVWKIMLSFLDPIL 1373
A+ +D+ +L + I+ L +L
Sbjct: 719 AVFVDTNGDLQVIQTIVHRLLGKVL 743
>gi|330798142|ref|XP_003287114.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
gi|325082892|gb|EGC36360.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
Length = 2341
Score = 137 bits (345), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 228/502 (45%), Gaps = 61/502 (12%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-----KSICIFLAPTVA 116
YQ+E +N ++ L TG GKT I+++ + E L + K +C+FL V
Sbjct: 264 YQVESFYHICAQNTLLILPTGMGKTLISIMGLMEFHRLNNSQEDTGDSKRVCLFLVDRVP 323
Query: 117 LVQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV QQAK IEE K G + L+S EKE Y+VLV + L ++
Sbjct: 324 LVAQQAKAIEEYSNLKTIKLYGEINKEDLRSKIK-EKE---YDVLVSTVGSFVSLLESKY 379
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
+K+E ++FDE HHA S HP+ + + K DI PRI G+TAS + + +
Sbjct: 380 VKIEEFYFIVFDEVHHAGGGS-HPFNQTINFIKKSDIKTWPRILGLTASLINIGNNTDEV 438
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
+ I ++E+L+ +K++ F+S + P I D S++ E+ AE
Sbjct: 439 IVSNKIKTIEDLMLSKIFKP------LKFLSEELTE----KPTIVDYSAN---DQEKQAE 485
Query: 295 -----IKREQ------YISALSRKLHDHQSLRNTTK-----QLNRLHDSMKFCLENLGVC 338
+ R+Q ++ + + ++ + L + T L R+ K L + C
Sbjct: 486 DIIKTLLRDQSARLKDMVTKVGKNPYNDEDLDDPTSISFRFALERIIFKAKENLTIVNRC 545
Query: 339 GALHASYILLS-----GDETMRNEL---IEAEGNTIDDSLCRFASQASEVFAAICRRDGI 390
+L + L S G EL IE E N SE A+ + +
Sbjct: 546 RSLLMIFELFSILATNGPLQTLEELVKIIEIEEN---------QDYHSEYLEALRTTEAL 596
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
D S + +S L +L G L+ + +K IVFV A L+ +L+ F
Sbjct: 597 FDDHSDLNRYSSK-YSVFLEQLYGFLTQNDVSS-IKIIVFVESRAGAARLTELLKKEAFN 654
Query: 451 ASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
C LVG +G MS + + I++KFR G+ L+V+T V EEG+DI+ C +VI +D
Sbjct: 655 DILNCKLLVG-QSGDDGMSSHKQQKIIKKFRDGKCKLIVSTNVLEEGIDIKECNMVICYD 713
Query: 511 LPETVASFIQSRGRARMPQSEY 532
++ S +Q RGRAR S++
Sbjct: 714 SVLSLKSLVQRRGRARSENSQF 735
>gi|295413446|gb|ACT68336.2| interferon-induced helicase C domain-containing protein 1
[Ctenopharyngodon idella]
gi|379048247|gb|AFC88291.1| MDA5 [Ctenopharyngodon idella]
Length = 961
Score = 137 bits (345), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 247/553 (44%), Gaps = 78/553 (14%)
Query: 41 GAESSVGAQKTDKDP-----KQIARKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIY 94
G E G D DP + + R YQ+E+ + A+EE NII+ L TG GKT +AV +
Sbjct: 262 GKEEEKGDLTEDDDPPVSKREIVLRDYQMEVARPALEEKNIIICLPTGSGKTRVAVYITK 321
Query: 95 ELAHLIRKPQ---KSICIFLAPTVALVQQQAKVIEESIG------FKVRTFCGGSKRLKS 145
E HL RK Q + L V LV+Q K G + V G S+ LK
Sbjct: 322 E--HLERKKQMGQPGKVVVLVNKVPLVEQHYKA---EFGRFLKHQYSVERVSGASQ-LK- 374
Query: 146 HCDWEKEIDQYEVLVMIPQILLYCLY------HRFIKMELIALLIFDECHHAQVKS--NH 197
+ I+Q ++++ QIL IK+ L++ DECHH + NH
Sbjct: 375 -ISLPQIIEQNDIIICTAQILENSFAKAKNGDEDGIKLSQFTLMVIDECHHTKKGDVYNH 433
Query: 198 PYAKIMKDFYKPDIMK--------VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
+ ++ +K ++K +P+I G+TASP VG GA +Q + I + LDA
Sbjct: 434 IMIRYLRQKHKNQLLKKQDKSPVPIPQILGLTASPGVG-GAMSQQMAEQHILQICANLDA 492
Query: 250 KVYSVEDAEDLESFVSSPVVRVYQ--------YGPVINDTSSSYVTCSE--QLAEIKREQ 299
+ E+ E+ +P R+ + +G VI T + L E +
Sbjct: 493 FTIKTKTFEEEEA--KTPYKRIARAEERKEDPFGDVIKKIMDEIHTHAGLLPLCEPGTQN 550
Query: 300 YISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL-GVCGALHASYILLSGD-----ET 353
Y +K +N K+ N+ ++ C E+L ALH S + D +
Sbjct: 551 YEQWAVQKE------QNAAKEENQ---KVRVCAEHLRHYNEALHQSNTIRMSDAFRFLDK 601
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLI 413
NE ++ + + D+ +E F +D A E++ +P + L +
Sbjct: 602 YHNEELKTKSSPDDEGTITITD--TERFLFTLFKDKKAK---LQELMGKPEYENNNLAQL 656
Query: 414 G--ILSTFRLQQHMKCIVFVNRIVTARAL-SYILQNLKFL-ASWRCHFLVG--VNAGLKS 467
IL F ++ + I+F ++A AL +I +N KF +L+G + +K
Sbjct: 657 KTIILKEFSTREVARGIIFTRTRLSAIALCQWIQENPKFEEVGVSASYLIGGGDQSVVKP 716
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
M+ K +L++FR GE+NLL+AT V EEGLDI C +VIR+ L + IQ+RGR R
Sbjct: 717 MTAAEQKDVLQRFRKGEINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGRGRA 776
Query: 528 PQSEYAFLVDSGN 540
S Y + ++G+
Sbjct: 777 EDSSYTLVAEAGS 789
>gi|357129531|ref|XP_003566415.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 366
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 165/391 (42%), Gaps = 68/391 (17%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
A +E LL +QF RGLL +A H SF YQRLEF+GDA L +++LY P +
Sbjct: 32 ARVERLLCYQFHDRGLLEEALTHQSFGDGSVSYQRLEFVGDAALGNAFSNFLYLTNPTIG 91
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITP 1323
PG L+ LRS ++ + A VAV Y L L + ++ D P
Sbjct: 92 PGALSTLRSANISTEKLARVAVRHDLYPLLRRACPRLDLLVGQFIESVKQELEDDLGAAP 151
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
VK PKVL D+VE+ A+ +D F+L +WK+ +PI+ + P+
Sbjct: 152 YGGSVVK----APKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPV 207
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
L ELC + QF +KGG +A +VF+S + E Q+
Sbjct: 208 STLHELCQKHGKIPQFNIWQKGGTTVA---------NVFVSGELVGMGSSE------QRT 252
Query: 1444 FSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGS 1503
+KL AA +L ++L + K + G S
Sbjct: 253 IAKLNAA-----RNALGNLLGGA-KQQVLTTGVGHI-----------------------S 283
Query: 1504 SCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE 1563
++G + R + +L E C+ W P F KE+G +H + FT+ V VE +
Sbjct: 284 RVEVG---------ELRECKQKLNEQCSRKHWPKPIFKLEKEDGPAHERKFTYSVQVETD 334
Query: 1564 APEKIIECIGEPQAKKKGAAEHAAEGMLWCL 1594
+ IG+P +K K A A+ ML L
Sbjct: 335 GGTFV--TIGDPMSKVKDAENSGAQKMLEVL 363
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 1023 MLLKALTTEKCQE-RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
+L +ALT + + S +RLE +GDA L A L+L + T+ G L+ RS ++
Sbjct: 47 LLEEALTHQSFGDGSVSYQRLEFVGDAALGNAFSNFLYLTNPTIGPGALSTLRSANISTE 106
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR--ICSKETERTIHSQYDGRAPDDLNA 1139
L ++A R++L +R R CPR + + ++ + + DDL A
Sbjct: 107 KLARVAVRHDLYPLLR-------------RACPRLDLLVGQFIESVKQELE----DDLGA 149
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
G K +AD+VEA+ A D F
Sbjct: 150 A--PYGGSVVKAPKVLADIVEAIAAAVYVDCKF 180
>gi|294934332|ref|XP_002781064.1| hypothetical protein Pmar_PMAR027514 [Perkinsus marinus ATCC 50983]
gi|239891297|gb|EER12859.1| hypothetical protein Pmar_PMAR027514 [Perkinsus marinus ATCC 50983]
Length = 580
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 251/584 (42%), Gaps = 119/584 (20%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRK-----PQKSICIFLAP 113
R YQLE+ K E ++ + ++ TG GKT +AV L+ E L ++ K +C+F AP
Sbjct: 4 RTYQLEVLAKIREFKSTVAFMPTGSGKTLVAVWLLRERIALQQRDVADGQAKKVCVFSAP 63
Query: 114 TVALVQQQAKVIEESIG----FKVRTFCGGSKRLKSHC--DWEKEIDQYEVLVMIPQILL 167
L QQA I +IG ++R G + R+ + C +W+ + EV+V +P+IL
Sbjct: 64 NKVLCHQQADYIGSNIGDDQRCRIRVLTGETPRIDNWCGTEWKDILASVEVIVCVPEILR 123
Query: 168 YCLYHRFIKMELIALLIFDECHHA----QVKSNHPYAKIMKDFYKPDIMKVPRIF-GMTA 222
L F+ LI LIFDECHH V S HPY ++ + + + R + G+TA
Sbjct: 124 RALACNFVDSNLIDTLIFDECHHCVSKKGVSSGHPYCQLAQ------LARGARKYVGLTA 177
Query: 223 SPVVGKGASAQANLP--KSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYG-PVIN 279
SP+ K + N+ K++ SL + S AE L+ +V +P ++ Y PV
Sbjct: 178 SPINCKKVDVKKNMQQLKTVLSLNGECEIVRPSATLAE-LQEYVHTPEPQLELYASPVYR 236
Query: 280 DTSSSYVTC---SEQLAEIKREQY--ISALSRKLHDHQSLRNTTKQLNRL---------- 324
+ C ++L ++ Y +S L +SLR+ +
Sbjct: 237 PNCDRFDDCKAKGQRLHDLMCGAYKRVSWLDEYCAIRKSLRHVDANYTAVVGLVSANLMD 296
Query: 325 --HDSMKFCLENLGVCG----------ALHA-SYILLSGDETMRNELI-----EAEGNT- 365
H+ + + E LG G ALHA YI + DE + + + +AEG
Sbjct: 297 LPHNEVSYYCELLGQLGKVLHEGGSRAALHALKYICRTHDEILEDYALPELYNQAEGKIE 356
Query: 366 ----------IDDSLCRF-------ASQASEVFAAICRRDGIASDLSCIEV--------- 399
+++ + F A+ + C + L +EV
Sbjct: 357 PGRLKFRIKRLEEHVAEFPLWPGTMANAVRQSLWEACEAICVYGGLELVEVAGNIDIPGV 416
Query: 400 --------LKEPFFSK---------KLLRLIGILSTFRL--QQHMKCIVFVNRIVTARAL 440
+ E F + KLL+L +L L ++ IVFV + ARAL
Sbjct: 417 SLEDLKRYITETFVPRLLGMAVDADKLLKLRSVLQLDDLAHSKYSATIVFVGERLMARAL 476
Query: 441 SYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSG-ELNLLVATKVGEEGLD 499
+ L NL+ + VG N S A++ + G + +L+AT V +EG+D
Sbjct: 477 AATL-NLR--------YCVGGNGERVSKQTEALEWFKDTAEEGSQRAVLIATSVCDEGVD 527
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARM---PQSEYAFLVDSGN 540
+ C V+ +D+P V SFIQ RGRAR +SE LV++ N
Sbjct: 528 VPICDCVVMWDVPPNVRSFIQRRGRARKIRPTKSELIVLVEASN 571
>gi|392568586|gb|EIW61760.1| ribonuclease III [Trametes versicolor FP-101664 SS1]
Length = 1232
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 205/458 (44%), Gaps = 68/458 (14%)
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
+L LLPS+M ++++ L+ EL L +S + LL AL+T F+ ERLE
Sbjct: 685 TLWLLPSVMTKVDSCLLVKELDAKLFHH-----SISEQQLLIALSTRAAWTEFNYERLEF 739
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGDAFLK L++ T EG L R + + N L + A R + +++ +
Sbjct: 740 LGDAFLKVIASNFLYVTMPTAGEGTLHNVRQSIIGNKVLHECAMRVGICPFVQHK----- 794
Query: 1105 QFFALGRRCPRI---CSKETERTIH---------------SQYDGRAPDDLNAEVRCSKG 1146
+F A + P I + E + ++ + L+A+ R
Sbjct: 795 RFVAKLWQPPHIPAPTATEPNEDVEMADGEGTGDGGEGKGNRKKSKKERQLSAQNRL--- 851
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS---- 1202
W+ K +ADVVEA++ A G + A + + I + A I ++
Sbjct: 852 --WMGDKVVADVVEAILAAAFLSGGHEGALQAARRLQIPLPNIAQWTDFTRIGAQQGEQD 909
Query: 1203 ---FLPLSASLD--MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAV 1255
+ LD + ++ ++G F LL QA H S + G Y+RLEF+GDA+
Sbjct: 910 AGAGAAGAFVLDDTVEAVQAIVGSVFSKPELLAQALTHGSAFGSSEGASYERLEFIGDAI 969
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
LD+L+ +++ +P L PG LT L+ +V+N+A A V ++ L F S+ L+++I
Sbjct: 970 LDFLVARHIFQRHPHLSPGGLTLLKGGMVSNRALAAFCVTTGLHRHLHFASDQLADSIQR 1029
Query: 1316 YVDYMIT------PSSTREVK-----------EGPRCPKVLGDLVESSLGAILLDSGFNL 1358
YV + + RE + E P+C L DLVES LGA+ + GF
Sbjct: 1030 YVTSLTELREKEYEAVAREQRLPGQYWLDLPLEPPKC---LSDLVESILGALYVCDGFFE 1086
Query: 1359 NTVWK----IMLSFLDPILKFSNLQLNPIRELLELCNS 1392
V + + F+D ++ L NP LLEL +
Sbjct: 1087 VGVGRFFDAVFKPFMDAHVRLQTLSTNPKVTLLELLQA 1124
>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
Length = 1404
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 118/219 (53%), Gaps = 14/219 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL ++A +N I L TG GKT IAVLL+ EL Q I FL +
Sbjct: 111 REYQLELFERAKAQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRAEGKQHRIAFFLVDS 170
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ ++ V F G L S WE+ + V+V +IL CL +
Sbjct: 171 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWEQHFQKNMVIVCTAEILNQCLLNS 230
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASA 232
++KM I LLIFDE HH K +HPYA+I+++ Y + D K PRIFGMTASP+ KG
Sbjct: 231 YVKMSQINLLIFDEAHH--TKKDHPYARIIRESYLEEDPSKRPRIFGMTASPIDTKG--- 285
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRV 271
++ LE LLD+++ + + L V PV R+
Sbjct: 286 --DIVDEATRLEKLLDSRIATTSNMSLLRQVVRRPVERL 322
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 137/265 (51%), Gaps = 22/265 (8%)
Query: 426 KCIVFVNRIVTARALSYILQ--NLKFLASWRCHFLVGVN----AGLKSMSRNAMKSILEK 479
KCIVF + TA LS + Q N+ F+ R L+GV AG+ R S++ K
Sbjct: 437 KCIVFTQKRYTALILSELFQTLNIPFI---RPGVLIGVRSGDLAGMNITFRQQFISLV-K 492
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
FR+GE+N L AT V EEGLDI C LV+RFDL +T+ ++QSRGRAR S YA +V+ G
Sbjct: 493 FRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRGRARHFNSTYASMVERG 552
Query: 540 N----QRELD------LIKNFSKE--EDRMNREIMDRTSSDAFTCSEERIYKVDSSGACI 587
N QR L+ +++NF + EDR+ I + R +K+ S+GA +
Sbjct: 553 NLDHEQRLLEVQDAEKMMQNFCRTLPEDRLLYGIDHDLDTVLQKDEGNRTFKIKSTGAKL 612
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSM 647
+ ++L RY S L +++ + + + G +C +ILP +PI + G+P
Sbjct: 613 TYHSATAILARYASSLQYEKEISAQVTYVVLPINGAFVCEVILPEKSPIRGLTGSPAMKK 672
Query: 648 EAAKKDACLKAIEDLHKLGALNDYL 672
AK+ A L K L+D+
Sbjct: 673 SIAKRSAAFDTCLLLRKNKLLDDHF 697
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 182/424 (42%), Gaps = 43/424 (10%)
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT 1030
C+ I + + S P + R E+L + L L A F + ++ + E + +
Sbjct: 892 CRFFTIAIEESLTPSSPPPPFVARRCESLNFTVRLDLALEA-FTKDSDNTEEHRAQQIHV 950
Query: 1031 EKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARN 1090
++ R + ERLE LGD FLK A LF + DE + R + N NL A +
Sbjct: 951 QRGMGR-NYERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVKK 1009
Query: 1091 NLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWL 1150
+ YIR + F ++ G + + K+ R ++ H L
Sbjct: 1010 EIYKYIRSRGFSRHTWYPEGLKL--LQGKDHSRKA-----------------TTESKHAL 1050
Query: 1151 HKKTIADVVEALVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-K 1201
+KTIADV EAL+GA + G KA T + E ++ I +
Sbjct: 1051 AEKTIADVCEALIGASLLSGGPEHRFDMAVKAVTTLVNSPSHMAERWKDYISLYTIPKYQ 1110
Query: 1202 SFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLD 1257
A + + +E L ++F + LL AF HPS+ CYQRLEFLGD+++D
Sbjct: 1111 RRAADGAEIHLCRKVEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLID 1170
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+ L++ YP P LT+ + +V+N+ +AV + L + S L I Y
Sbjct: 1171 MVCVEDLFARYPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYA 1230
Query: 1318 DYMITPSSTRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD 1370
+ + T E V + P PK L D+VE+ +GA+ +DSGFN + + +
Sbjct: 1231 EEIQTAEGESESAVDYWTVTKDP--PKCLPDMVEAYVGAVFVDSGFNFEVIEEFFRDHIK 1288
Query: 1371 PILK 1374
P +
Sbjct: 1289 PFFE 1292
>gi|20385628|gb|AAM21359.1| melanoma differentiation associated gene 5-like protein [Mus
musculus]
Length = 1025
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 268/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 293 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 350
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 351 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 411 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 468
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA-KVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I ++ LDA + +V E+
Sbjct: 469 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 527
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 528 QLKHQIKEPCKKFV----IADDTRENPF--KEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 581
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 582 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLEAFYTD 633
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 634 EKEKKFAVLNDSDKSDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 692
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 693 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 752
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 753 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 812
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 813 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 849
>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
Length = 1402
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 191/415 (46%), Gaps = 58/415 (13%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFS------- 1038
+ PS + R+++ L A E+ LL G E+ + L+A+T +E E S
Sbjct: 901 IFPSFITRIDSYLHAWEVCSLL------GMEIDVGVALEAITKDSENTHEHGSAQVSLQR 954
Query: 1039 -----LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQ 1093
ERLE LGD FLK A L+ + DE EL +R + N L A +
Sbjct: 955 GMGSNYERLEFLGDCFLKLATSLSLYTAYHADDECELHVKRMVLICNRYLFTKAKEMKIP 1014
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKK 1153
YI+ F S+ T G+ N+ + H L K
Sbjct: 1015 EYIQTAGF----------------SRRTWYPKMKLLMGKGTTQHNSSKE--EISHRLADK 1056
Query: 1154 TIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNI--CISSKSFL---PLSA 1208
+I+DV EAL+GA + D G AT + I E + C + ++ P +
Sbjct: 1057 SISDVCEALIGAALIDKGLDGATQIVTAILRTPEHSQKVWADYYNCYTKPAYQLQEPSPS 1116
Query: 1209 SLDMAT-LEILLGHQFLHRGLLLQAFVHPS----FNRLGGCYQRLEFLGDAVLDYLITSY 1263
+ +A +E L+G++F H LL+ A HPS ++R+ YQRLEFLGDAVLD + Y
Sbjct: 1117 HIRVAEDIEELVGYKFKHPRLLISALTHPSLPFTWDRVPS-YQRLEFLGDAVLDLVCVRY 1175
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-VDYMIT 1322
++ YP P LT+ + +V+N+ VAV+ F++ L +VL I Y VD
Sbjct: 1176 MFQKYPHADPQWLTEHKMAMVSNKFLGMVAVEMGFHRKLRRMGSVLDHAIREYEVDIQDA 1235
Query: 1323 PSSTREVKE------GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDP 1371
+++ + P PK L D++E+ +GA+ +DSGF N V +++ +F+ P
Sbjct: 1236 KANSNGAVDFWTSLKAP--PKALPDVLEAFIGAVFVDSGFQYNIVERLVNTFILP 1288
Score = 134 bits (336), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 153/320 (47%), Gaps = 30/320 (9%)
Query: 391 ASDLSCIEVLKEP-----FFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYIL 444
A+D+ C + P S K+L L L + +Q KCI+FV+R TA L +
Sbjct: 301 AADIVCKYNIPPPSADSSHLSPKVLLLHAYLKEIYSVQTTDKCIIFVSRRYTATVLGELF 360
Query: 445 QNLK--------FLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEE 496
+ LK L S + G N L R M ++ KFR G+LN L+AT V EE
Sbjct: 361 KWLKIKYLQIGVLLGSLTGSRVPGTNFTL----REQMITV-SKFRQGKLNCLIATSVAEE 415
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDR 556
GLDI C LVIRFDL T+ ++QSRGRAR S+Y +++SGN+ L+++ + E
Sbjct: 416 GLDIPDCSLVIRFDLYRTMIQYVQSRGRARSSVSKYIHMLESGNRSHLEMLSDVRNSEKI 475
Query: 557 MN--------REIMDRTSSDAFTCSE--ERIYKVD-SSGACISAGYGVSLLHRYCSKLPH 605
M I+D TS D + E E Y ++ +GA ++ + +L Y LP
Sbjct: 476 MRDFCRSLPADRILDSTSPDESSVLENTEGPYHIEPGTGAKLTMNSSMLILFHYTQLLPQ 535
Query: 606 DEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
++ +P F G I + LP +P+ I G P + AAK+ A +L +
Sbjct: 536 EDNELLQPLFTVRRVSEGFISEVTLPTLSPVQHIEGAPMPTKRAAKQSASFFTCLELRRK 595
Query: 666 GALNDYLLPQEDNATEDEPM 685
G L++ L+P+ + M
Sbjct: 596 GELDENLMPKSSRTKRNPKM 615
Score = 133 bits (335), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 126/240 (52%), Gaps = 32/240 (13%)
Query: 51 TDKDPKQIA--RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS-- 106
T K+ K I R+YQLEL + A N I L TG GKT IA LLI H+I K +S
Sbjct: 7 TSKNEKIICGPREYQLELFEIAKTRNTIAVLDTGSGKTLIACLLI---RHIIEKELESRA 63
Query: 107 ------ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKE-----IDQ 155
+ FL V LV QQA V+ +I K+ +CG DW KE +
Sbjct: 64 AGNHPRVSFFLVHNVTLVFQQAAVLRCNIDAKIGEYCGD----MGVGDWRKETWNDILKG 119
Query: 156 YEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV- 214
+V+VM IL CL H FIKM+ I LL FDE HHA K H +A+I++DFY P+
Sbjct: 120 QQVIVMTADILYSCLTHAFIKMKDINLLCFDEAHHA--KKRHSFARIIQDFYLPEPENTR 177
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVY 272
P+IFGMTASPV G+ QA + LE LL +++ + D L+ +S P VV Y
Sbjct: 178 PKIFGMTASPVGGRSDVVQAAV-----DLEKLLHSRIATTSDLALLQGSISRPEEVVTAY 232
>gi|168177333|pdb|3C4T|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 135 bits (340), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 17/193 (8%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T E + ++F ++ LLQAF H S+ N + YQRLEFLGDA+LDYLIT +LY +
Sbjct: 17 TFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQH 76
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
PG LTDLRS LVNN FA++AV ++K+ S L I+++V + + + + +
Sbjct: 77 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDS 136
Query: 1332 GPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS- 1376
R PK +GD+ ES GAI +DSG +L VW++ + P++ KFS
Sbjct: 137 ELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSA 196
Query: 1377 NLQLNPIRELLEL 1389
N+ +P+RELLE+
Sbjct: 197 NVPRSPVRELLEM 209
Score = 41.6 bits (96), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 19/137 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 51 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 108
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 109 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 156
Query: 1155 IADVVEALVGAFIDDSG 1171
+ D+ E+L GA DSG
Sbjct: 157 MGDIFESLAGAIYMDSG 173
>gi|148695044|gb|EDL26991.1| interferon induced with helicase C domain 1 [Mus musculus]
Length = 1025
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 266/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 293 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 350
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 351 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 411 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 468
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 469 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 527
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 528 QLKHQIKEPCKKFV----IADDTRENPF--KEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 581
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 582 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 633
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 634 EKEKKFAVLNDSDESDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 692
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 693 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 752
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 753 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 812
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 813 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 849
>gi|132252411|gb|ABO33314.1| melanoma differentiation-associated protein 5 [Mus musculus]
gi|158699346|gb|ABW76702.1| melanoma differentiation-associated protein 5 [Mus musculus]
Length = 1025
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 266/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 293 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 350
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 351 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 411 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 468
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 469 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 527
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 528 QLKHQIKEPCKKFV----IADDTRENPF--KEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 581
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 582 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 633
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDL-------SCIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 634 EKEKKFAVLNDSDESDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 692
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 693 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 752
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 753 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 812
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 813 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 849
>gi|257096036|ref|NP_082111.2| interferon-induced helicase C domain-containing protein 1 isoform 1
[Mus musculus]
gi|62510931|sp|Q8R5F7.1|IFIH1_MOUSE RecName: Full=Interferon-induced helicase C domain-containing
protein 1; AltName: Full=Helicase with 2 CARD domains;
Short=Helicard; AltName: Full=Interferon induced with
helicase C domain protein 1; AltName: Full=Melanoma
differentiation-associated protein 5; Short=MDA-5;
AltName: Full=RIG-I-like receptor 2; Short=RLR-2
gi|18698981|gb|AAL77205.1| HELICARD [Mus musculus]
gi|132252386|gb|ABO33313.1| melanoma differentiation-associated protein 5 [Mus musculus]
Length = 1025
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 266/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 293 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 350
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 351 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 411 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 468
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 469 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 527
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 528 QLKHQIKEPCKKFV----IADDTRENPF--KEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 581
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 582 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 633
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 634 EKEKKFAVLNDSDKSDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 692
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 693 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 752
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 753 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 812
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 813 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 849
>gi|344313227|gb|AEN04473.1| melanoma differentiation-associated protein 5 [Carassius auratus]
Length = 984
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 246/556 (44%), Gaps = 84/556 (15%)
Query: 41 GAESSVGAQKTDKDP-----KQIARKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIY 94
G E G D DP + + R YQ+E+ + A+EE NII+ L TG GKT +AV +
Sbjct: 262 GKEEEKGDLTEDDDPPVSKREIVLRDYQMEVARPALEEKNIIICLPTGSGKTRVAVYITK 321
Query: 95 ELAHLIRKPQ---KSICIFLAPTVALVQQQAKVIEESIG------FKVRTFCGGSKRLKS 145
E HL RK Q + L V LV+Q K G + V G S+ LK
Sbjct: 322 E--HLERKKQMGQPGKVVVLVNKVPLVEQHYKA---EFGRFLKHQYSVERVSGASQ-LK- 374
Query: 146 HCDWEKEIDQYEVLVMIPQILLYCLY------HRFIKMELIALLIFDECHHAQVKS--NH 197
+ I+Q ++++ QIL IK+ L++ DECHH + NH
Sbjct: 375 -ISLPQIIEQNDIIICTAQILENSFAKAKNGDEDGIKLSQFTLMVIDECHHTKKGDVYNH 433
Query: 198 PYAKIMKDFYKPDIMK--------VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
+ ++ +K ++K +P+I G+TASP VG GA +Q + I + LDA
Sbjct: 434 IMIRYLRQKHKNQLLKKQDKSPVPIPQILGLTASPGVG-GAMSQQMAEQHILQICANLDA 492
Query: 250 KVYSVEDAEDLESFVSSPVVRVYQ--------YGPVINDTSSSYVTCSEQL-----AEIK 296
+ E+ E+ +P R+ + +G VI T + L
Sbjct: 493 FTIKTKTFEEEEA--KTPYKRIARAEERKEDPFGDVIKKIMDEIHTHAGLLPLCEPGTQN 550
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL-GVCGALHASYILLSGD---- 351
EQ++ Q +N K+ N+ ++ C E+L ALH S + D
Sbjct: 551 YEQWVV---------QKEQNAAKEENQ---KVRVCAEHLRHYNEALHQSNTIRMSDAFRF 598
Query: 352 -ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
+ +E ++ + + D+ +E F +D A E++ +P + L
Sbjct: 599 LDRYHSEELKTKSSPDDEGTITITD--TERFLFTLFKDKKAK---LQELMGKPEYENNNL 653
Query: 411 RLIG--ILSTFRLQQHMKCIVFVNRIVTARAL-SYILQNLKFL-ASWRCHFLVGV--NAG 464
+ IL F ++ + I+F ++A AL +I +N KF +L+G +
Sbjct: 654 AQLKTIILKEFSTREVARGIIFTRTRLSAIALCQWIQENPKFEEVGVSASYLIGGGDQSV 713
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
+K M+ K +L++FR GE+NLL+AT V EEGLDI C +VIR+ L + IQ+RGR
Sbjct: 714 VKPMTAAEQKDVLQRFRKGEINLLIATTVAEEGLDIAECNVVIRYCLVTNEVAMIQARGR 773
Query: 525 ARMPQSEYAFLVDSGN 540
R Y + ++G+
Sbjct: 774 GRAEDGSYTLVAEAGS 789
>gi|257096038|ref|NP_001157949.1| interferon-induced helicase C domain-containing protein 1 isoform 2
[Mus musculus]
Length = 976
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 266/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 244 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 301
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 302 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 361
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 362 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 419
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 420 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 478
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 479 QLKHQIKEPCKKFV----IADDTREN--PFKEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 532
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 533 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 584
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 585 EKEKKFAVLNDSDKSDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 643
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 644 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 703
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 704 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 763
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 764 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 800
>gi|51329784|gb|AAH80200.1| Ifih1 protein [Mus musculus]
Length = 976
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 266/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 244 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 301
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 302 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 361
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 362 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 419
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 420 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 478
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 479 QLKHQIKEPCKKFV----IADDTREN--PFKEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 532
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 533 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 584
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 585 EKEKKFAVLNDSDESDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 643
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 644 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 703
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 704 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 763
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 764 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 800
>gi|449459642|ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 338
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 172/395 (43%), Gaps = 71/395 (17%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
LE +L + F ++ LL +A HPS++ Y+RLEF+GD+ + +T+Y + P L
Sbjct: 7 ALERILSYNFNNKSLLEEALTHPSYS-ASASYERLEFVGDSAIGLAVTNYFFLASPHLHQ 65
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
G L+ LR+ V+ + A VAV Y ++ DS + + + +VD + S+
Sbjct: 66 GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVPYGGMM 125
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELLELCN 1391
+ PKVL D+VES GAI +D F+L +W I+ L+PI LQ+ P+ L ++C
Sbjct: 126 KAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVCQ 185
Query: 1392 SYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
+ K G +A V GK F+++ ++ Q+ ++L AA
Sbjct: 186 RNGKQVDIKHWKNGSNSIASVHVDGK----FVASGSS-----------MQKEIARLNAA- 229
Query: 1452 YVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPS 1511
E+++K S + R I D + E +I
Sbjct: 230 -------REALIKLSDSMDTR--------IKTFVTIDGIDESFEI--------------- 259
Query: 1512 LTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIEC 1571
A+ +L+++C W+ P + K+ G SH ++F V KI C
Sbjct: 260 --------EGAKQKLHDVCCKRKWQKPNYSVEKDLGPSHERIFVCSV--------KIATC 303
Query: 1572 ------IGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+G+ +++ K A AA M+ L+ +L
Sbjct: 304 YGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338
Score = 43.9 bits (102), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 27/170 (15%)
Query: 1003 IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH 1062
I L+ +LS +F + +L +ALT S ERLE +GD+ + AV + FL
Sbjct: 6 IALERILSYNFNNKS-----LLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
+ +G L+ R+ V+ L ++A + L Y+R R P + K E
Sbjct: 61 PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVR-------------RDSPAMDDKVKE 107
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
+G + G K +AD+VE++ GA D F
Sbjct: 108 FVDSVALEGSS---------VPYGGMMKAPKVLADIVESVAGAIYVDVEF 148
>gi|83774779|dbj|BAE64902.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1256
Score = 134 bits (338), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 158/610 (25%), Positives = 268/610 (43%), Gaps = 86/610 (14%)
Query: 99 LIRKPQKSICIFLAPTVALVQQQAKVIEESIG-FKVRTFCGGSK--RLKSHCDWEKEIDQ 155
+I PQ + FL PTVAL Q + I + R+F + W +
Sbjct: 1 MINLPQ--LIWFLCPTVALCNQHVRTITAHVPPMWCRSFTSNDNVDHWGTVETWNIALAS 58
Query: 156 YEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM--- 212
+V + Q+L L HRF+ M+ ++L+IFDE + KIM+++Y +
Sbjct: 59 VKVAISTYQVLYDALVHRFVTMDRLSLIIFDEGN-----------KIMREYYHTEPQSHD 107
Query: 213 -KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV-----EDAEDLESFVSS 266
+ P I G+TASP++ +I++LE + + +++S + L F +
Sbjct: 108 KQTPYILGLTASPILS-----------NISTLEEI-ERRLHSPCKTPRQFYAQLLRFTNQ 155
Query: 267 PVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHD 326
P++ P++ S + E R S+ R + RN +QL R +
Sbjct: 156 PLI-----VPLVPLRGSMTSPSPSLILERIRGLLQSSYERGSYS----RNAKRQLTRFSN 206
Query: 327 SMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
+ LG A YI S + + + AE +A + +C+
Sbjct: 207 QAEIIGRELGPWAA--TKYIQTSITQFKEHMRMNAEKTHTPSPEREYAMEM------LCK 258
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYI 443
L IE E S + + L +++H K ++FV+ T AL ++
Sbjct: 259 -------LGNIEDYDELVHSDNISPMSQRLLDTLIEEHRKGFRALIFVSLRATVLALKWL 311
Query: 444 LQNL-KFLASWRCHFLVGVNAGLKSMSR-------NAMKSILEKFRSGELNLLVATKVGE 495
++N + +RC VG++ +S +R + L+KFR G L+L++ T E
Sbjct: 312 IENHPETRRRFRCGTFVGMSRIHQSKTRLGDVHDIRSQMETLQKFRDGVLDLIITTDALE 371
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE-YAFLVDSGNQRELDLIKNFSKEE 554
EG+DI C V+ F+ + SFIQ RGRAR QS+ + FL D + + + L++ E
Sbjct: 372 EGMDIPACNTVLNFNCILNLKSFIQRRGRARREQSKFFIFLQDEEDLKNVSLLQF---RE 428
Query: 555 DRMNREIMD--RTSSDAFTCSEERIYK----VDSSGACISAGYGVSLLHRYCSKLPHDEF 608
+ R++ D RT +ER+ S+GA ++ G +S L+R+C +LP F
Sbjct: 429 SELVRKLQDEGRTVLPDSLNHDERLRDSLAFSSSTGAQMTMGNAISHLYRFCGELPAQPF 488
Query: 609 FNPKPKFYYFDDLGGTICHII-LPANA-PIHQIVGTPQ--SSMEAAKKDACLKAIEDLHK 664
+ P F Y D G + I+ LP+N P Q + + + + AK+DA L+A + L
Sbjct: 489 VSNSPAFSYETDECGQVQAIVRLPSNLDPSLQTFKSLRKWAKKKWAKEDAALQAYKALFH 548
Query: 665 LGALNDYLLP 674
+ND+ LP
Sbjct: 549 ARLINDHFLP 558
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 198/469 (42%), Gaps = 82/469 (17%)
Query: 938 PLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKD----IGSSLSLL-PSI 992
PL R RN L++ K+ E + + L +L + D I + +LL PSI
Sbjct: 759 PLTRRRNFLYDPKIVTVTPTENQHSTSLVRQGLSELAADDYLVDRLPSIYAEAALLAPSI 818
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
+HR+ L+A +L+ + ++ P+ A ++L AL+ R + +GDA +K
Sbjct: 819 IHRIGVYLIAEKLRKQIFSN-PQAARFERMDLLCIALSPTDDMHRHEFRSMAFIGDAIVK 877
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
+ + R LFL H EG LT + + V+++ L + Y+ F+ G+
Sbjct: 878 FLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFN-------GK 930
Query: 1112 RC-PRICSKETERT--IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID 1168
R P S ++ +Y G A T+AD+V+AL GA
Sbjct: 931 RWRPSFVSTTLSKSGPTRRRYVGAA--------------------TVADMVKALAGAAFL 970
Query: 1169 DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT---LEILLGHQFLH 1225
D+G A F+ + + ++ ++ + S S SL +T LE LLG+ F
Sbjct: 971 DNGLDQA--FICAAAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSD 1028
Query: 1226 RGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
+ L +++ HPS L G Y+RL FLG +++ ++ YL+ +L L+S +
Sbjct: 1029 KSLAIESMTHPSCVGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAV 1088
Query: 1284 VNNQAFAN-------------VAVDQ-------------SFYKFLIFDSNVLSETINNYV 1317
NN A + VD + Y FL S+ LS+ +++ V
Sbjct: 1089 TNNMFLAFLCLTFHWEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLV 1148
Query: 1318 DYMITPSST--REVKEGPRCP----------KVLGDLVESSLGAILLDS 1354
+ + + R++ E P KV D+V+S GAI +DS
Sbjct: 1149 EDLTSQLHVIKRDLWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDS 1197
Score = 42.0 bits (97), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
++ + F+GDA++ +LIT L+ + G LT ++ +V++ A F +LI
Sbjct: 865 FRSMAFIGDAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLI- 923
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLG-----DLVESSLGAILLDSGFN 1357
T N + + ST K GP + +G D+V++ GA LD+G +
Sbjct: 924 ------TTRFNGKRWRPSFVSTTLSKSGPTRRRYVGAATVADMVKALAGAAFLDNGLD 975
>gi|255577153|ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
gi|223531076|gb|EEF32926.1| ribonuclease III, putative [Ricinus communis]
Length = 342
Score = 134 bits (337), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 180/399 (45%), Gaps = 61/399 (15%)
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLY 1265
+ AS ++ +E +L + F ++ L+ +A H S+ YQRLEF+GDA L ++++++
Sbjct: 1 MEASSSISAVEKILNYTFKNKQLVEEALTHSSYTA-SPNYQRLEFIGDAALGLALSNHVF 59
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
YP L PG L+ LR+ ++ + A VAV ++FL ++ L + + + D ++
Sbjct: 60 LAYPDLDPGHLSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFSDAVLREED 119
Query: 1326 TREVKEGP-RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NP 1382
G + PKVL D+VES A+ +D F+L +W I L+PI+ +LQ P
Sbjct: 120 EAVAHGGTVKAPKVLADIVESVAAAVYVDVNFDLQRLWVIFRGLLEPIVTPEDLQQQPQP 179
Query: 1383 IRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQ 1442
+ L ELC ++ K G K +A V G F+++ ++ Q+
Sbjct: 180 MTMLFELCQKKGKEVDIVHWKSGTKNIASIYVDGG----FVASGSSE-----------QK 224
Query: 1443 LFSKLKAA-GYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQG 1501
+KL AA G + K L ++ S+ +G+ E + +
Sbjct: 225 ETAKLNAAKGALQK---LSHLMPSN-------LGHFEDVLKTIG---------------- 258
Query: 1502 GSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVE 1561
G + A+ +L+ELC W PT++ KE G SH K + V+
Sbjct: 259 -------------GSFEIEGAKRKLHELCGKKKWPKPTYNIEKETGPSHEKKYVCS--VQ 303
Query: 1562 IEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
I + ++ G+ + + K A AA M+ L+ YL
Sbjct: 304 IATVDGVLYMRGDEKMRVKEADNSAASLMIRALQESNYL 342
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
+++ +ALT + +RLE +GDA L A+ H+FL + +D G L+ R+ ++
Sbjct: 22 QLVEEALTHSSYTASPNYQRLEFIGDAALGLALSNHVFLAYPDLDPGHLSLLRAANISTE 81
Query: 1082 NLLKLAARNNLQVYIR 1097
L ++A ++ L ++R
Sbjct: 82 KLARVAVKHGLFRFLR 97
>gi|395330621|gb|EJF63004.1| hypothetical protein DICSQDRAFT_83832 [Dichomitus squalens LYAD-421
SS1]
Length = 1330
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 214/477 (44%), Gaps = 69/477 (14%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
L PE+C I S +L L+PSIM+++E+ L+ EL L + V + LL
Sbjct: 761 LIPEMCYKFTIPAS--TFRTLWLMPSIMNKIESYLLVKELNARLFHN-----AVIEQQLL 813
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
AL+T F+ ERLE LGD+FLK + +V G+L + R + ++N L +
Sbjct: 814 IALSTPAAWTEFNYERLEFLGDSFLKVVASNFCYATMPSVHVGDLHQARQSIISNKVLQE 873
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE--RTIHSQYD----GRAPDDLNA 1139
A R + Y++ + +F A + P + E +T D G AP+ +
Sbjct: 874 GATRVGVPSYVQHK-----RFVAKLWQPPLSTANVAEELKTEGGNGDVEMTGEAPEKKDK 928
Query: 1140 EVRCSKGHH-------WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQ 1192
R K W+ K IADVVEA++ A G + A + + + + +Q
Sbjct: 929 GKRSKKQRQLDEQNTLWMGDKIIADVVEAILAASFLSGGHEVALEAARRLQVPIP-NVAQ 987
Query: 1193 VTNICISSKSFLPLSASLDMAT---------LEILLGHQFLHRGLLLQAFVHPSF--NRL 1241
++ + ++ MA+ LE L +F LL QA H S
Sbjct: 988 WSDYARLAAHHAAREQTVVMASAPSRMTISVLEKLFNSKFNRLDLLGQALTHTSAFSGAE 1047
Query: 1242 GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS--MLVNNQAFANVAVDQSFY 1299
G Y RLEF+GDA+LD+L++ Y++ +P L PG LT L++ +V+NQ A V
Sbjct: 1048 GTSYDRLEFIGDAILDFLVSRYIWERHPYLSPGGLTMLKANGAMVSNQTLAAFCVHVGLQ 1107
Query: 1300 KFLIFDSNVLSETINNYVDYMITPS------STREVK-----------EGPRCPKVLGDL 1342
++L +S LS I Y+D++ ++RE + E P+C L D+
Sbjct: 1108 QYLRMESKDLSTAIQKYIDFLEELRKKEYDFASREQRLPGQYWLDMPMEPPKC---LSDV 1164
Query: 1343 VESSLGAILLDSGF-------NLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNS 1392
VES +GA+ + F TV+K FL+ ++ L NP LLEL +
Sbjct: 1165 VESLIGALYVSDNFFEVGVGRFFETVFK---PFLEAHVRLQTLSTNPKITLLELLQA 1218
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 30/317 (9%)
Query: 384 ICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSY 442
+ + G+A L P + K+ +L+ +L + + IVFV V A L
Sbjct: 161 LIKSHGMADRLQVAPGSSNPNVTFKVSKLLQVLQPYAAYGDQFRGIVFVRDKVVASVLPG 220
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKSMS-RNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
+L A + F+ + K S +N++ + L F S + NL+V TK E+ +++
Sbjct: 221 LLN----AAETQVPFIRAIAPSRKERSGKNSLHAALSAFSSSKYNLIVLTKSMED-VELP 275
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
+++ FD+ + S+ S R S +LV+ GN + ++ ++ M +
Sbjct: 276 PASIIVNFDVFDDQLSYAYSHLHTRGRHSHLVYLVEKGNNEQRRILTRVQSVDNEMKEWV 335
Query: 562 MDRTSSD----------------AFTCSEERIYKVDS-SGACISAGYGVSLLHRYCSKL- 603
D D + + +E Y VD+ + A I + +R+ ++
Sbjct: 336 GDFVRGDCNAPPKSMHVGLDPYQSDSDNEGEDYIVDAVTSARIDKSQAIPTFYRFAIQMH 395
Query: 604 ----PHDEFFNPKPKFYYFDDLGGTICHII-LPANAPIHQIVGTPQSSMEAAKKDACLKA 658
DE + D + +II P + + I G S+ AK++AC +A
Sbjct: 396 AVSGAEDEKVAFNMETGERGDDAAVLRYIISFPKSTALAAISGPYCSTKWEAKREACHQA 455
Query: 659 IEDLHKLGALNDYLLPQ 675
++L ++G ++ PQ
Sbjct: 456 CKELVRVGIMDHRHFPQ 472
>gi|307109321|gb|EFN57559.1| hypothetical protein CHLNCDRAFT_143199 [Chlorella variabilis]
Length = 2232
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 238/552 (43%), Gaps = 118/552 (21%)
Query: 931 QPLLRA-----KPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSS 985
QPLL A + L R ++ RK + E EE LP +LC + + +
Sbjct: 1665 QPLLAAARVSRQQLARGLDMRRARKRGCALQLEAEEEVRLLP-QLCIVHPV--PAALWRP 1721
Query: 986 LSLLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L LP++M +LE L+A +L + +L A P E+L TT RLE
Sbjct: 1722 LGTLPALMWQLEGALLADQLLEQMLPADLPPEKAPPLELLR---TT----------RLET 1768
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGDAFLK+AV LF H EG+LT+R+ V N +L + A + L +R PF
Sbjct: 1769 LGDAFLKFAVSAQLFSAHRQYHEGQLTKRKELVVANIHLAEAAVKLGLDRRLRVLPF--- 1825
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
S ++ +P+ VR S K +AD +EAL+G
Sbjct: 1826 ----------------------SMHNWASPE----AVRKSS-------KVLADAMEALLG 1852
Query: 1165 AFIDDSGFKAATAFLKWIG------IQVEFEASQVTNICISS--------KSFLPLSASL 1210
AF+ G+ AA AFL+ +++ A+ +C K ++P+SA
Sbjct: 1853 AFLVAGGYPAALAFLQASAGRRGRRLRLPRAAAPGWGLCSQPYSQHLGLLKGWVPISAEA 1912
Query: 1211 -----------DMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDY 1258
D+ +E +LGH F + L+++A H S+ G C+QRLEFLGDAVLD
Sbjct: 1913 CIPPESPELECDVGAIEAVLGHTFASKWLVVEALTHCSWPGSGVRCFQRLEFLGDAVLDA 1972
Query: 1259 LITSYLYSVYPKL-------KPG-----QLTD-LRSMLVNNQAFANVA------------ 1293
L+ + SV KPG + D LR L + A A
Sbjct: 1973 LMHD-MRSVAVNASRLAYAGKPGLDFVEEWRDRLREALEAQEQQACPASPAGGTAGAAAG 2031
Query: 1294 ---VDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP--RC-PKVLGDLVESSL 1347
S + +V+++ + +S R+ P C VL D+VES +
Sbjct: 2032 DADAAASKEALRAAELSVMTQFAFGFQTIQAPKASGRDQPPSPALHCLQTVLSDVVESLI 2091
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQF--PSLKKG 1405
GA+ +D+G ++ VW++ LDP++ L ++PIR L EL ++ ++ ++G
Sbjct: 2092 GAVFVDTGGDMGRVWEVTQRLLDPMVVPETLPVHPIRRLQELVQRCGVNPKYEEAGREQG 2151
Query: 1406 GKFLAEAKVTGK 1417
G KV+ +
Sbjct: 2152 GAGRVHVKVSAQ 2163
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 143/329 (43%), Gaps = 89/329 (27%)
Query: 404 FFSKKLLRLIGILSTFRLQQHMKC-------IVFVNRIVTARALSYILQNLKFL-ASWRC 455
S K+ L G L +R IVFV + + A AL +L L +R
Sbjct: 786 LVSPKMAALAGQLMRYRGAAAALAPGPGWCGIVFVTQRMAAWALHKMLSTLPATRGVFRT 845
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
++G+ G + SR IL +FR+GELNLLV+T V EEG+D+++C LV+R+DLP
Sbjct: 846 SAIMGL--GPREQSR-----ILRRFRAGELNLLVSTSVAEEGIDVKSCQLVVRYDLPNNA 898
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM------------- 562
S+IQSRGRARM SE +V G + E ++++ + E ++ +E++
Sbjct: 899 QSYIQSRGRARMINSELLMMVQEGVEEEHRMVRHMVEYEHQLRQEVLLNIERLQAGAIDD 958
Query: 563 -----DRTSSDAFTCSEERIYKVDSSGA-------------CISAGY------------- 591
+ + +Y+V+S+GA C A
Sbjct: 959 DADVAAEAAELQAALAHAPVYEVESTGARATLENAQARPHTCAQAASRPAQRRCSCCRTA 1018
Query: 592 ----GVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI--CHIILPANAPIHQIVGTPQS 645
++LLH Y SKLP D++ +P + + L + + LP N+P+ G
Sbjct: 1019 VQEGPLALLHTYTSKLPSDQYTVLRP-LFRTEQLDQRVFRTRVFLPNNSPLPWADG---- 1073
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
LGALND+LLP
Sbjct: 1074 -------------------LGALNDFLLP 1083
Score = 77.0 bits (188), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 42/225 (18%)
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD---IMKVPRIFGMTASPVVGKGASA 232
+M + LL+FDECHH KS HP+ +IM+ FY + P +FGMTA+P
Sbjct: 303 QMSQVHLLVFDECHH--CKSKHPFNRIMQQFYHSHEALLAPRPHVFGMTAAPANVGRRET 360
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT----- 287
Q ++ I LE LDA+V +V + +E P +RV Y P + + VT
Sbjct: 361 QEDMEAKIRVLEANLDARVVTVVNRASVEEVARPPTLRVAAYRPSWWEGTPVAVTQRLLL 420
Query: 288 -------CSEQLAEIKREQYISALSRKLH-------------DHQSLRNTTKQLNRLHDS 327
C+ + E+ Q++ +L R+L D T +L+++ S
Sbjct: 421 RARRRLQCAGENFEL---QWLRSLQRQLGCEGLEPSAHCIFFDPLVPGFTAARLDQMLSS 477
Query: 328 MKFCLENLG-VCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
++ L+ LG C AL A+ + S L++ +T + C
Sbjct: 478 VEHVLQTLGPYCAALCAAEVFAS--------LVQPPASTSGTAYC 514
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI 93
AR YQLEL + A + N+I +L TG GKT ++VLLI
Sbjct: 44 ARIYQLELLELAKKRNVIAFLDTGAGKTFVSVLLI 78
>gi|281427125|ref|NP_001163918.1| dicer 1, ribonuclease type III [Xenopus laevis]
gi|261826170|gb|ACX94846.1| truncated double-stranded RNA-specific endoribonuclease type III
[Xenopus laevis]
Length = 1795
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 164/655 (25%), Positives = 270/655 (41%), Gaps = 104/655 (15%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 437 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEVEFRK 492
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 493 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKGRARAPISNY 552
Query: 533 AFLVDSGN----QRELDLIKNFSKEEDRMNREIMD--RTSSDAFTCSEE----RIYKVDS 582
L DSG + +L K+ K + MD T S+ +E + + D
Sbjct: 553 IMLADSGKIKAFEEDLKTYKSIEKILRNKCSKSMDCGNTESEPIVDDDEIFPPYVLRQDD 612
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIHQ-IV 640
++ + ++RYC++LP D F + PK + G + LP N+P+ IV
Sbjct: 613 GSPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGPYHSTLYLPINSPLRAPIV 672
Query: 641 GTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYE 695
G P + A++ L + LH++G L+D+L+P + D +
Sbjct: 673 GPPMNCARLAERAVALICCKKLHEIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRP 732
Query: 696 GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADRIYR 742
G R + + +P LR S+ K P L M +PD P + R
Sbjct: 733 GSTKRRQCYPKAIPECLRNSYPKPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTR 792
Query: 743 EFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV-------I 794
FG+ +P + H V + G ++ +L SG + E+ ++ I
Sbjct: 793 CFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFSLNLEQLELITRLHQYIFSHI 849
Query: 795 LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV-FGT 849
L + EF P D Y +LP+ +S +D+K + S G
Sbjct: 850 LRLEKPALEFKPTVAD--------CAYCVLPLNVVNDSGTLDIDFKFVEDIEKSEARTGI 901
Query: 850 PGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYS 904
P + GP D +++++ ++ + FY V ++ + S
Sbjct: 902 PNTQYS-----AEGPFIF-----KLEDYQDAVIIPRYRNFDQPHRFY-VADVYTDLTPLS 950
Query: 905 PYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESH 957
+ + + ++ + Y + L + QPLL NLL R L S +
Sbjct: 951 KFPSPEYETFAEYYKTKYDLDLTNLNQPLLDVDYTSSRLNLLTPRHLNQKGKALPLSSAE 1010
Query: 958 ELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
+ ++ L PELC + + S + LPSI++RL LL A EL+
Sbjct: 1011 RRKAKWESLQNKQILVPELCAIHPVPAS--LWRKAVCLPSILYRLHCLLTAEELR 1063
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 111/227 (48%), Gaps = 16/227 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ NIIV L +G GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNIIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNAKRTVFLVNSEK 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC----DWEKEIDQYEVLVMIPQILLYCLYH 172
V QQ + KV + S K+ C W +E ++VLVM I L L
Sbjct: 95 QVSQQVSAVRTHTDLKVGEY---SDLQKTQCWAKGKWYQEFQTHQVLVMTCHIFLNVLKT 151
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
+ + I LL+FDECH A +HPY IMK PRI G+TAS + GK
Sbjct: 152 GNVSLSNINLLVFDECHLA--IQDHPYRDIMK--ICESCQTCPRILGLTASILNGK--CD 205
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+L + I +LE +L + + D L+ + S P V GP ++
Sbjct: 206 PHDLEEKIQNLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYVD 252
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 104/206 (50%), Gaps = 37/206 (17%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQ-VTNIC-------------- 1197
K+IAD VEAL+G ++ G +AA FL + ++V E + VTN
Sbjct: 1531 KSIADCVEALLGCYLTSCGERAAQLFLCSLDLKVLPEVRKPVTNTSTRGNYSLDGRTNSE 1590
Query: 1198 ISSKSF------LPLSASLDMATLEILLGH--------------QFLHRGLLLQAFVHPS 1237
+S K +P + E L H QF ++ LLQAF H S
Sbjct: 1591 LSCKGIEYGYLKIPPRCMFEHPEAEKTLDHLISGFENFEKKINYQFKNKAYLLQAFTHAS 1650
Query: 1238 F--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVD 1295
+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 1651 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1710
Query: 1296 QSFYKFLIFDSNVLSETINNYVDYMI 1321
++K+ S L I+++V + +
Sbjct: 1711 YDYHKYFKAISPELFHVIDDFVQFQL 1736
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+ GD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1273 LILQALTLSNASDGFNLERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSYMRSKKVSNCN 1332
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + + FDP
Sbjct: 1333 LYRLGKKKGSPSRMVVSIFDP 1353
Score = 42.4 bits (98), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE GD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1272 GLILQALTLSNASD-GFNLERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSYMRSKKVSN 1330
>gi|328770756|gb|EGF80797.1| hypothetical protein BATDEDRAFT_24696 [Batrachochytrium dendrobatidis
JAM81]
Length = 1641
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 204/454 (44%), Gaps = 80/454 (17%)
Query: 988 LLPSIMHRLENLLVAIELKH-----LLSASFPEGAEVSA--EMLLKALTTEKCQERFSLE 1040
+LP I ++ + +A ++K+ L + +F G++ SA ++L A T+ +S E
Sbjct: 1079 VLPLITQKIWHYFLARDIKYGYGLTLANQAF-TGSQFSATPKLLQIATTSSASNMGYSYE 1137
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
RLE LGD+FLK HLF + +EG +T++R N L + A LQ +I +P
Sbjct: 1138 RLETLGDSFLKIHQSLHLFCRNPFKNEGWMTQQRIKIEKNQVLHQKALDAGLQHFILTKP 1197
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVE 1160
+ + LN E+ KT+A +E
Sbjct: 1198 LTKRNWVPPAKNI----------------------RLNQEIS---------NKTLAGSIE 1226
Query: 1161 ALVGAFIDDSGF-KAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS---------- 1209
A++GA +++ G +AA A + + + E + S + +S P S
Sbjct: 1227 AVIGACVEEGGVEQAALAVSRLLSDEYETDWSNYHHDLYTSIQASPSSTDYYESVVHVDP 1286
Query: 1210 LDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYP 1269
+ +E +G+ F + LL +A H +LG +QRLEFLGDAVL YL +LY + P
Sbjct: 1287 IATKQIEEQIGYTFRDKTLLWEALTHSGTGKLGSMFQRLEFLGDAVLSYLAMQHLYKITP 1346
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--------- 1320
L PG L+ LR+ LV NQ A V++ K++ + I + ++
Sbjct: 1347 PLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRHTDMTMEAAIGRFTAWVQGYLASESS 1406
Query: 1321 ----ITPSSTREV------KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM-LSFL 1369
I+ S+T+ +G PK GD+ ES LGA+ +DS F+++ V + ++ +
Sbjct: 1407 TPLPISTSATQIASARLFWNKGNTAPKTAGDVYESMLGAVFVDSQFDIHCVQSMFDITVI 1466
Query: 1370 DP-ILKFSNL-------QLNPIRELLELCNSYDL 1395
P +F++L NP+ EL L SY L
Sbjct: 1467 SPWWWRFTSLFGGESMIYENPVAELRTL--SYSL 1498
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 122/608 (20%), Positives = 225/608 (37%), Gaps = 131/608 (21%)
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK 208
W K+ Q +++VM L++ L +++ M L++FDECH + S+ + + ++
Sbjct: 182 WTKKPIQADIVVMTASTLMHLLNKKYVLMSEFNLVVFDECH--SICSDQSHRLFLHTYWT 239
Query: 209 PDIMKVP-RIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP 267
+ + R G+T+ K NL S+ L+N L +K D+ F P
Sbjct: 240 FNAKNISWRTLGVTSLSNFNKD-----NLCDSLCELQNKLLSKAVVSNMQGDICLFKPPP 294
Query: 268 VVRVYQYGPVINDTSSS-YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHD 326
V + ++ + Y ++ E+ ++ Y N +L L
Sbjct: 295 TETVVYFDASLSQSMPHIYDDIHKKCPELAQDLYCQL------------NVLSELCNLFG 342
Query: 327 SMKFCLENLG-----------VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFAS 375
S +C+E L C AL + + + + + + N +DS
Sbjct: 343 S--WCVERLLDMTILWYLRKLKCAALFKTSM------PVHDSSLTSCHNQKNDSFFECNL 394
Query: 376 QASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIV--FVNR 433
S+ RD I+ E+L +P FS L + +L IV +
Sbjct: 395 DCSKAVLYFDTRDIISQ----AELLDDPLFSNPLWKT-------KLNSRSDRIVKFCTDH 443
Query: 434 IVTARALSYILQNLKFLASWRCHFLVGVNAGL-------------KSMSRNAMKSILEKF 480
IV+++ LK C F++ + L S N++ ++ F
Sbjct: 444 IVSSKF------GLKHNLILPCTFMIASHPNLIVLKPLVLNEPLGMDTSDNSIS--IDAF 495
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
R G NLL+ T + EE DI +VI++D V+ + Q + R +S++ L+
Sbjct: 496 RKGNCNLLITTWIPEEICDITPIHVVIQYDADMQVSDYKQYQKRQCFSESQFIVLMGKSA 555
Query: 541 QRELDLIKNFSKEEDRMN-----------------------------REIMDRTSS---- 567
+ E + + ++E +M+ +D SS
Sbjct: 556 KDEPNCFMDIQQKESQMHAMPIQLLLDDHQQAVSSKLRCDQVTGMSLESTLDSISSPFSE 615
Query: 568 -----------------DAFTC---SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDE 607
D FT S++ Y++ +S + I + +LH YC+ L +
Sbjct: 616 SPLVAPCSPTYHHRETLDTFTSESLSQDITYEIPNSNSVIRLADSIRILHEYCATLTVNN 675
Query: 608 FFNPKPKFYYFDDLGGTI-CHIILP--ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHK 664
KP++ Y I++P + +G S + AK+ A LK ++ LH
Sbjct: 676 -VQYKPQYRYMQSKSLLFYVEIVMPDYIRQECQKTIGPENVSKKIAKRMAALKLVKQLHL 734
Query: 665 LGALNDYL 672
G L+ +L
Sbjct: 735 CGELDKFL 742
>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1435
Score = 133 bits (335), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 120/214 (56%), Gaps = 14/214 (6%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS--ICIFLAPTV 115
+ R+YQ E+ +A E NII L TG GKT I+ LL+ +A KP +S I IFL P V
Sbjct: 14 LPRRYQEEIFVRAQEGNIIAALDTGSGKTFISTLLMKWIA---SKPAESSKIIIFLVPKV 70
Query: 116 ALVQQQAKVIEESIGFKV-RTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV+QQA IE +V + + + L W ++ +V+VM QI L + H
Sbjct: 71 PLVEQQATFIERQTPLRVGQCYGANAWDLTDRGAWRRQFAASDVIVMTAQIFLNLITHSH 130
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
M+ ++LL+FDECHH + NH Y IM+++++ P+IFGMTASP+ +A
Sbjct: 131 WSMDRVSLLVFDECHH--TRKNHAYNGIMREYFQCPGHLRPKIFGMTASPIWNPKDAA-- 186
Query: 235 NLPKSINSLENLLDAKVYSVEDAE-DLESFVSSP 267
S+ +LE +DAKV++V + E +L S + P
Sbjct: 187 ---TSLATLEKNMDAKVFAVREHESELLSIIPKP 217
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 193/428 (45%), Gaps = 48/428 (11%)
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
L+ + S + + LLP ++HR+ +L K L + ++L++A T
Sbjct: 914 LRRLHMSAYLWRTFHLLPRLLHRVTDLYRVQRAKQELGLP-----PIPDDLLVEAYTLPH 968
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
FS +RLE LGD+ LK V HL EG+L R NAV N LL A L
Sbjct: 969 TGAGFSNQRLETLGDSVLKLCVIVHLLNRFRRRHEGQLDALRRNAVANRTLLARAHAIGL 1028
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
Y+ C+ ++ R R E + T P D + ++ + +
Sbjct: 1029 GSYLT------CETMSV--RTWRHVVPEEQHT---------PFDTTSARFVARS---IPR 1068
Query: 1153 KTIADVVEALVGAFIDDSG----FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSA 1208
+ + D +EA +GA G +A T +G V + N+ K A
Sbjct: 1069 RCLQDCMEATLGAAFLGGGIPMALQAGTVLGMSLGGPVPW------NLRYGRKPIGKTPA 1122
Query: 1209 SLDMATLEILLGHQFLHRG-LLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYS 1266
+L E L H H G LL++A HPSF G YQRLEFLGDA++D ++ YLY
Sbjct: 1123 ALFHRVQEAL--HYDFHNGDLLIEASTHPSFESGTFGSYQRLEFLGDALIDLVVMQYLYR 1180
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYV----DYMI 1321
+P+ PGQL+ RS V +Q A VAV Q K ++ +++ L+ + Y+ D+
Sbjct: 1181 KFPEGTPGQLSWARSRAVCSQTMAWVAVTQLELNKIMLVNNSELNIALAKYIPILEDFSA 1240
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL- 1380
+ K P PK L D++ES +GA+LLD+ ++ ++ + +L L L
Sbjct: 1241 EDIIAKSWKLDP--PKALSDVLESIMGAVLLDTAYDYERSEAVVEWVMRDVLDALTLDLP 1298
Query: 1381 -NPIRELL 1387
+PI +L+
Sbjct: 1299 PDPISQLM 1306
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 36/286 (12%)
Query: 428 IVFVNRIVTARALSYILQNLKFL-ASWRCHFLVG----VNAGLKSMSRNAMKSILEKFRS 482
IVFV + A AL+ +L L L RC LVG A LK M + ++ FR
Sbjct: 384 IVFVEQRHIAVALARLLGRLPELRGRVRCADLVGHGGQTTANLKGMEIQGQQDVVRAFRR 443
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
GE+NLLVAT V EEGLD C LVIRFD + + ++QSRGRAR S + +V G+++
Sbjct: 444 GEINLLVATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRGRARHHTSTFVIMVPRGSEQ 503
Query: 543 ELDLIKNFSKEEDRM-----NREIMDRTSSDAFT-------------CSEERIYKVDSSG 584
+ + F+ E +M + +++ S+++ T +E Y + S+
Sbjct: 504 HIMRYRTFADSEPQMKQIYQTQNALEQLSAESDTEEGECEEPEHPEDLAERERYVIPSTL 563
Query: 585 ACISAGYGVSLLHRYCSKLPHDEFFNP--KPKFYYFDDLGGTICHIILPANAPIH----Q 638
A ++ + +L CS +P D + P +PK+ G + LP++ P+
Sbjct: 564 AVLTYHSAIGMLSHLCSLIPRDR-YTPIHQPKY-----TGEFQVTLQLPSSLPLPPEDLT 617
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP-QEDNATEDE 683
VG + S AK A A+ LH+LG +DYLLP + N T+ E
Sbjct: 618 FVGPLKRSKREAKCAAAFMAVRKLHQLGVFDDYLLPVRRSNDTDAE 663
>gi|302502160|ref|XP_003013071.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
gi|291176633|gb|EFE32431.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
Length = 1490
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 169/658 (25%), Positives = 282/658 (42%), Gaps = 95/658 (14%)
Query: 84 GKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGS- 140
G + A+L I YEL R + FLAP V L +QQ + I E + ++ + G
Sbjct: 132 GHIYSAILRIRYELE---RCSNDKLVWFLAPRVPLAEQQYRAISEQLPAYQTKILTGADN 188
Query: 141 -KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPY 199
+R + W+ + ++V PQILL L + FI + IALL+FDE ++
Sbjct: 189 LERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFITLRRIALLVFDEDQLSETND---- 244
Query: 200 AKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA--KVYSVEDA 257
+P I G+TASP K +L LE LDA K ++
Sbjct: 245 --------------LPSILGLTASPT-SKLIEDSLSLLMESRQLEQNLDAFCKTPAIH-R 288
Query: 258 EDLESFVSSPVVR--VYQYGPVI-NDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSL 314
E++ +V P +R YQ +I ++ ++ + + +I+ + + K D +S
Sbjct: 289 EEMMQYVHIPELRRISYQKDSIIPHNMEMKFLHMLDDI-DIESDPFFQRHKGKT-DSKST 346
Query: 315 RNTTKQLNRLH---DSMKFCLENL----GVCGALHASYIL---LSGDETMRNELIEAEGN 364
+ L R D +K C + G G +S + R +L++ +
Sbjct: 347 EKCLRALARKTPCLDQLKRCFTKISHMYGELGHWASSAFISEIYRRTREKRAKLVDHSWS 406
Query: 365 TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQH 424
D F A E AI S + S+K+ LI +LS+ L
Sbjct: 407 EWDRDDSSFMCNALEPVVAIMGERCWNSTPDAV--------SQKVEHLIDLLSS-ELTGS 457
Query: 425 MKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNA------GLKSMSRNA-MKSIL 477
+ I+FV + TA LS+++ + L + + +G +A L +S+ MK+ +
Sbjct: 458 SRGIIFVEQRATAVMLSHLISHYPELTHIKSDYFLGNSAFSDRKADLTELSKPGDMKNSI 517
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV- 536
+SG+ NLLVAT V EEG+D+ C LV+ FD P+ + SF+Q RGRAR S++
Sbjct: 518 ADLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYA 577
Query: 537 --DSGNQRELDLIKNFSKEEDRMNRE-IMDRTSSDAFTCSEERIYKVDSSGACISAG--- 590
D+ ++ + +++ KE N+E I D E +++S+G ++ G
Sbjct: 578 EDDTATYKDWEAMEDIMKERYLSNKEFIERLREEDDEEEVEYESLRIESTGYGVTPGLVL 637
Query: 591 --------YGV----------SLLHRYCSKLPHDEFFNPKPKFYY----FDDLGGTICHI 628
Y V + L +CS +P EF + +P F D+ +
Sbjct: 638 WDCLLTIYYSVRALLTLENARAHLSHFCSTIPC-EFTDTQPDFIISKTGIKDM--LTAKV 694
Query: 629 ILPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
+LP + + G E AK+DA +A L+K G +ND+L+P+ T++E
Sbjct: 695 LLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYKAGLVNDHLMPEHCRTTDEE 752
Score = 104 bits (260), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 174/408 (42%), Gaps = 66/408 (16%)
Query: 988 LLPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+PS++H + L+A EL K +LS P G + + +++L A+T +E + +RLE LG
Sbjct: 1006 FIPSLIHTIGRYLLAEELSKTILS---PIGFQ-NIQLVLTAITATSAREDTNYQRLEFLG 1061
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK L H EG L++++ + V+NS L K A L +I F ++
Sbjct: 1062 DSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILTTCFTGAKW 1121
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
L Y+ D NA K L KT+ADVVE+L+G
Sbjct: 1122 RPL-------------------YNSTYTD--NAGKIGEKSTRKLSTKTLADVVESLIGVA 1160
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEAS--QVTNICISSKSFLPLSASLDMATLEILLGHQFL 1224
I D G L+ ++ + S ++ + S+ F ++ +E L+ + F
Sbjct: 1161 IIDGGENKVLRCLELFLPEINWLPSGERIEILYDSAPDFNDDCPRDILSKIEPLIDYSFT 1220
Query: 1225 HRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
+ LL + HPS G YQRLEFLGD++LD ++T L+ ++ + +R+ LV
Sbjct: 1221 KKALLAASLSHPSNPISGMTYQRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTALV 1280
Query: 1285 NNQAFA----NVAVDQ----------------------SFYKFLIFDSNVLSETINNYVD 1318
N A N + D+ S ++++ S + ET
Sbjct: 1281 NADFLAFLCMNTSTDETREDVCVSPTGEVEVTSSTRQVSLWQYMSHSSTDIVETQQAMAR 1340
Query: 1319 YM--ITPSSTREVKEGPR----------CPKVLGDLVESSLGAILLDS 1354
+ ++ G R PK D++ES LGAI +DS
Sbjct: 1341 TFEELRDQIENALRSGARYPWTLLSTLNAPKFFSDIIESILGAIFIDS 1388
Score = 49.3 bits (116), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
YQRLEFLGD+ L + L + +P G L+ + +V+N AVD +F++
Sbjct: 1054 YQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDTGLDQFILT 1113
Query: 1304 --FDSNVLSETINN-YVDYM--ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F N+ Y D I STR++ K L D+VES +G ++D G N
Sbjct: 1114 TCFTGAKWRPLYNSTYTDNAGKIGEKSTRKLST-----KTLADVVESLIGVAIIDGGEN 1167
>gi|388857965|emb|CCF48410.1| related to cell cycle control protein dicer [Ustilago hordei]
Length = 1752
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 192/423 (45%), Gaps = 38/423 (8%)
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
S+ LLPSI R + LL+A + EG + + +L+ALT+ F ERLE
Sbjct: 1133 SILLLPSIFTRYDQLLLA----QACNNDLLEG-RLDNDKVLEALTSPSAGSAFDYERLEF 1187
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD FLK H F H E EL V N LLK A R L+ Y C
Sbjct: 1188 LGDTFLKLIATCHTFTTHLGRTEAELHMANKGIVTNVRLLKEAKRLGLEKYAI---LPSC 1244
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
P IC+ T D D+ E KT++D+VE+L+G
Sbjct: 1245 NLLPRRFTAPVICNVGGALTNDPSMDHDGQVDVVKE------------KTLSDIVESLIG 1292
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFL 1224
A + + ++ + S + C +++ + L+ L H +
Sbjct: 1293 AALLSPSSSSPSSSSP---FFLLPFLSFLHVYCAFQRNWSSRLNPPSLRHLQSLFSHTYR 1349
Query: 1225 HRGLLLQAFVHPS-FNRLGGCYQRLEFLGDAVLDYLITSYLYSV---YPKLKPGQLTDLR 1280
+ L L++F HPS + YQRLEFLGDA +D+ I S +Y+ L PG++T L+
Sbjct: 1350 YPHLALESFTHPSLLASILPSYQRLEFLGDAWIDFFIVSRIYTEGGGLVVLDPGEMTALK 1409
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY---VDYMITPSSTRE---VKEG-P 1333
+L +N A + + V +KF+ +S VL E+I Y ++ ++ K G
Sbjct: 1410 GVLASNAALSALGVKLGLHKFIASNSAVLVESIAKYGKGLEKVLRKGGGEGQYWTKAGMV 1469
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVW----KIMLSFLDPILKFSNLQLNPIRELLEL 1389
+ PK + D+VE+S +I++DSGF+ +T +I F D K+ +L++ ++ ++E
Sbjct: 1470 QVPKAVADVVEASFASIVVDSGFDQDTAQRVFGRIFTPFYDEHCKWEDLRVGEVKRVIEY 1529
Query: 1390 CNS 1392
+S
Sbjct: 1530 LSS 1532
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 137/305 (44%), Gaps = 36/305 (11%)
Query: 406 SKKLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNLKFLASWRCHFLVG---- 460
S KLLRLI +L F + C I+FV R TA L +++ + L FL+G
Sbjct: 510 SPKLLRLIELLHCFEPSKSSFCGIIFVERRQTATLLVELVKRIPGLEFIHPEFLLGHDNG 569
Query: 461 -VNAGLKSMSRNAMKSILEKFRSGE-LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
N G M + +L +FR + NLL+AT + EEGLDIQ LVIRFDL SF
Sbjct: 570 AANGGAPGMDWHDQVQVLNRFRRRKPTNLLIATSIAEEGLDIQAANLVIRFDLFNRHISF 629
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKN-FSKE---------------------EDR 556
+QSRGRAR +S + + + GNQ I N F E ED
Sbjct: 630 LQSRGRARAKESRFILMAEKGNQEHAGTILNAFKTEANRAKWLDGIAEPHLAMPDWGEDW 689
Query: 557 MNREIMDRTSSDAFTCSEERIYKV---DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
+ +D S + K ++GA + +L+ Y + L H E+
Sbjct: 690 QQKLRIDTDSQEGVGVEGGEEEKCMFEPTTGARLFPEDAPTLVSHYAASL-HSEYLKDAV 748
Query: 614 KFYYFDDLGGTICH---IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALND 670
Y + + G + + LP+ A + + S +AAK+ A +A + L LG L++
Sbjct: 749 LAYRIEKVDGLPSYKAVLELPSTAAVRSVESDGCRSKKAAKRMAAFRACQQLRALGELDE 808
Query: 671 YLLPQ 675
+L+P+
Sbjct: 809 WLMPK 813
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 147/324 (45%), Gaps = 50/324 (15%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIR--------------- 101
+ R YQLEL + A N++V L TG GKT I+VLL+ Y H
Sbjct: 81 VPRSYQLELAELAKAGNVLVCLDTGSGKTLISVLLLQYVHQHSSPPPTPSLAPSSGAQPF 140
Query: 102 ---KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG---GSKRLKSH--------- 146
PQ+ + FL V LV QQ+ VI + V G S R KS
Sbjct: 141 SSPAPQRKVAFFLVNLVPLVHQQSSVIAGNSRLSVGKLYGELKDSLRSKSSQLAVDDWRS 200
Query: 147 CDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF 206
W + ++V+V Q L L H FIKM + LLIFDE HHA NHP+ +IMK +
Sbjct: 201 PQWSALLASHQVIVSTAQCFLDALIHGFIKMSDLNLLIFDEVHHAL--KNHPFFRIMKYY 258
Query: 207 YKPDIMKVPRIFGMTASPV-VGKGASAQANLPKSINSLENLLDAKVYSVEDA--EDLESF 263
+ P+IFGMTASP+ G G +A+ L+ +DA++++V +LE
Sbjct: 259 RLAKEEERPKIFGMTASPIFTGSGRFDEAS-----QYLQRAMDARIHTVSRGALRELEEV 313
Query: 264 VSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNR 323
P V ++ P + + + + +E+ E I S+K+ L + ++++
Sbjct: 314 KRRPEEMVVEFEPYLTVVDEPWNADAVKYSELSME-MIELFSKKVDLEICLDDEEEEVDP 372
Query: 324 LHDS--------MKFCLENLGVCG 339
L ++ +++ + +LG G
Sbjct: 373 LTEAFEKEVRPKLEYTMRHLGPIG 396
>gi|74225485|dbj|BAE31652.1| unnamed protein product [Mus musculus]
Length = 1025
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 265/577 (45%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT AV + + HL +
Sbjct: 293 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTREAVYITKD--HLDK 350
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 351 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 411 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 468
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 469 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 527
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 528 QLKHQIKEPCKKFV----IADDTRENPF--KEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 581
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 582 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 633
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 634 EKEKKFAVLNDSDKSDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 692
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 693 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 752
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 753 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 812
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 813 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 849
>gi|443720569|gb|ELU10263.1| hypothetical protein CAPTEDRAFT_201240 [Capitella teleta]
Length = 794
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 251/550 (45%), Gaps = 68/550 (12%)
Query: 28 VEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAM---EENIIVYLGTGCG 84
V S+ + F ++ + +D+D R YQ+EL K ++N ++ T G
Sbjct: 42 VASSSIDNDQLPFDSDDELSDPPSDQDID--LRGYQVELVDKISALGDQNAVIVAPTNSG 99
Query: 85 KTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGSKRL 143
KT ++ +I HL + P + +FLAP LVQQQ KV+++S+ K+R+ G +
Sbjct: 100 KTRVSAEIIKN--HLTKHPDSKV-VFLAPNGMLVQQQCKVLQKSLPDAKIRSLQGDA--- 153
Query: 144 KSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME---LIALLIFDECHHAQVKSNHPYA 200
+ + Y+V+VM PQIL + E I L+IFDECHH K HPY+
Sbjct: 154 CTSLQLKLSFRTYDVVVMTPQILTNAYDDVIDRNEPRFPIGLMIFDECHHCLKK--HPYS 211
Query: 201 KIMKDFYKPDIM--KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV-EDA 257
++M + Y D+ + PRI GMTAS V + +A + + L N +DA++ V E+
Sbjct: 212 QLM-EIYHLDLNADQRPRIIGMTAS-VRITSKNVEAAVTHILKLLAN-MDAQLVMVEENK 268
Query: 258 EDLESFVSSP---VVRVYQYG---------PVINDTSSSYVTCSEQLAEIKREQYIS--- 302
++L + + P ++ + G ++ D Q+ +K + +I+
Sbjct: 269 KELGLYCNKPEEIIIELRSSGNNWFTNTIQKIMKDIEGEMKKYHPQMTIVKCQHHIAVDL 328
Query: 303 ---ALSRKLHDHQSLRNTTKQL-NRLHD-SMKFCLENLGVCGALHASYILLSGDETMRNE 357
A ++ Q R T++L +R+ D +K +L C Y+ + + M N+
Sbjct: 329 TPRARKGEIMYTQWHRTITRKLISRIEDVDVK---RDLVAC----TDYLDIYNNSLMINQ 381
Query: 358 LIEAEGNTIDDSLCRFASQASEVFAAICRRDG-------IASDLSCIE-VLKEPFFSKKL 409
E T+D R+ ++ +E + D + + + IE ++P
Sbjct: 382 ----ECRTMD--AWRYLARKTERLVKLKEPDTNLMLANLLIDERNEIEQYCEDPVNENPW 435
Query: 410 LRLIG--ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN--AGL 465
L ++ IL R M+C+VF V AL+ +N L + FL G N A
Sbjct: 436 LSVVKEHILKRKRPGLTMRCLVFCRTRVVCAALAEWAKNTPDLCELKPAFLTGSNAPADT 495
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
++ + ++++FR G+ +L T + +EG+D+Q C VIR++ P Q+RGRA
Sbjct: 496 NGLTVHEQTEVIQEFREGDCQVLFTTSLLQEGIDVQACDNVIRYNFPSDTIGGTQARGRA 555
Query: 526 RMPQSEYAFL 535
R + Y L
Sbjct: 556 RKEDATYTVL 565
>gi|345308281|ref|XP_001509166.2| PREDICTED: probable ATP-dependent RNA helicase DDX58
[Ornithorhynchus anatinus]
Length = 781
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 248/553 (44%), Gaps = 55/553 (9%)
Query: 44 SSVGAQKTDKDPKQIARKYQLELCKKAM-EENIIVYLGTGCGKTHIAVLLIYELAHLIRK 102
SS G KT P Q AR YQ+EL K A+ +N I+ TGCGKT +A+++ +
Sbjct: 85 SSAGVMKTTYSP-QNARSYQMELAKPALVGKNTIICAPTGCGKTFVAIMICKNHLQNMPN 143
Query: 103 PQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMI 162
Q+ +FL V + +QQ V E + T G S + E I +++V+
Sbjct: 144 GQRGKVVFLVTKVPVYEQQKAVFIEQFERESYTVAGISGETAGNTPVEHVIKNSDIIVLT 203
Query: 163 PQILLYCLYHRFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRI 217
PQIL+ L + + + + L+IFDECH+ +HPY KIM ++ + ++P+I
Sbjct: 204 PQILVNSLKNGTVPSLSMFTLMIFDECHNTD--KSHPYNKIMINYLDNKLGTSACQLPQI 261
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQ 273
G+TAS VG + + + I L LDA + S E+ +DLE V P + R +
Sbjct: 262 VGLTASVGVGDAKNKNEAI-QHICKLCACLDAPIISTVRENLDDLEKIVFKPQKLFRKVE 320
Query: 274 YGPV--INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNR-LHDSMKF 330
V D S + +E+LA + + + +R L + Q+ T++ + + + K
Sbjct: 321 TRRVNLFKDIVSQLMAETEKLA-----KNVHSKTRCLFEVQNRSFGTQKYEQWIVNIQKI 375
Query: 331 CL--------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFA 382
C E +C L +I S + LI E D+L + V +
Sbjct: 376 CKVFQIPDKEEERRICKTL---FIYTSHLRKYNDALIIHEDARTTDALDYLEDFFNHVKS 432
Query: 383 A---------ICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVN 432
I R + +L I E + KL L +L + L + I+FV
Sbjct: 433 GEVDKIEQYLIQRFEEKQQELKNIS-RNEQNDNPKLKELCFLLEEEYHLNPESRTILFVK 491
Query: 433 RIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLV 489
A AL ++ L + L+G ++ M+ K +LE F+ SGE +L+
Sbjct: 492 TRALANALKRWIEENPKLDYLKSDVLMGRGKRNQATGMTLPLQKDVLETFKASGETKVLI 551
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKN 549
AT V +EG+DI C +VI ++ V IQ+RGR R S+ FLV S + EL
Sbjct: 552 ATSVADEGIDIAQCNVVILYEYIGNVIKMIQTRGRGRAKDSK-CFLVSS--KEEL----- 603
Query: 550 FSKEEDRMNREIM 562
+E+ M +E+M
Sbjct: 604 IEREKTNMIQEVM 616
>gi|224064945|ref|XP_002301611.1| predicted protein [Populus trichocarpa]
gi|222843337|gb|EEE80884.1| predicted protein [Populus trichocarpa]
Length = 303
Score = 131 bits (329), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 114/198 (57%), Gaps = 10/198 (5%)
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
D+ +E +L ++F + LL +A H SF+ Y+RLE++GD+VL+ L T Y +YP
Sbjct: 53 DLDEVEEILHYKFKSKKLLEEALTHASFSDQCFSYERLEYVGDSVLNLLFTKEQYFLYPD 112
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY----VDYMITPSST 1326
L PG LT LRS V+ + A VA+ +++L +L E I + +DY + +
Sbjct: 113 LPPGPLTRLRSANVDTEKLARVAIKHKLHRYLRHKMPLLEEQIREFSQAILDYPLHSNGL 172
Query: 1327 REVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIREL 1386
E PK L D+VE+++GA+ +DS F+++ VWKI L+PI+ L+++P+ EL
Sbjct: 173 VE------TPKALADIVEAAIGAVFIDSNFSIDVVWKIFKDLLEPIISQETLKVHPVTEL 226
Query: 1387 LELCNSYDLDLQFPSLKK 1404
E+C +L ++F L K
Sbjct: 227 YEVCQKRNLKVKFVDLWK 244
Score = 48.1 bits (113), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 33/158 (20%)
Query: 1020 SAEMLLKALT----TEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
S ++L +ALT +++C FS ERLE +GD+ L + + L+ + G LTR RS
Sbjct: 67 SKKLLEEALTHASFSDQC---FSYERLEYVGDSVLNLLFTKEQYFLYPDLPPGPLTRLRS 123
Query: 1076 NAVNNSNLLKLAARNNLQVYIRDQ-PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAP 1134
V+ L ++A ++ L Y+R + P L + + +HS P
Sbjct: 124 ANVDTEKLARVAIKHKLHRYLRHKMPL-------LEEQIREFSQAILDYPLHSNGLVETP 176
Query: 1135 DDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
K +AD+VEA +GA DS F
Sbjct: 177 ------------------KALADIVEAAIGAVFIDSNF 196
>gi|357619534|gb|EHJ72068.1| putative dicer 1 [Danaus plexippus]
Length = 754
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 102/190 (53%), Gaps = 16/190 (8%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
LE L ++F R LLL A H S N L CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 505 LENTLQYRFRDRSLLLTALTHASCHNNTLTDCYQRLEFLGDAILDYLITRHLYEDPRRHS 564
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------------DYM 1320
PG LTDLRS LVNN FA +A F+K+ S L+E + YV ++
Sbjct: 565 PGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTKYVKIQEENGHSISEEHY 624
Query: 1321 ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK-FSNLQ 1379
+ E E PK LGDL ES GAI LDSG +L VW+ + L L FS
Sbjct: 625 LIQEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLAAVWRAVGGLLRAELDAFSAAA 684
Query: 1380 -LNPIRELLE 1388
+P+RELLE
Sbjct: 685 PKSPVRELLE 694
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 44/167 (26%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLK+A+ +L+ V EG+L+ RS
Sbjct: 290 SPSVILQALTMSNANDGINLERLETIGDSFLKFAITAYLYCALPAVHEGKLSHMRSK--- 346
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
Q ++D +P Q + G P +
Sbjct: 347 -------------QGDVKDGENEP-QVDSTGCFIPYNLITQ------------------- 373
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV 1186
H + K+IAD VEAL+GA++ + G + A F+ W+GI V
Sbjct: 374 --------HSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGITV 412
Score = 50.8 bits (120), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1023 MLLKALTTEKCQERF---SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
+LL ALT C +RLE LGDA L Y + RHL+ G LT RS VN
Sbjct: 518 LLLTALTHASCHNNTLTDCYQRLEFLGDAILDYLITRHLYEDPRRHSPGALTDLRSALVN 577
Query: 1080 NSNLLKLAARNNLQVYIR 1097
N+ LAAR+ Y R
Sbjct: 578 NTIFATLAARHGFHKYFR 595
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 1218 LLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
L GH ++LQA + N G +RLE +GD+ L + IT+YLY P + G+L+
Sbjct: 283 LEGHPGPSPSVILQALTMSNAND-GINLERLETIGDSFLKFAITAYLYCALPAVHEGKLS 341
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPK 1337
+RS + + N S F+ ++ +IT S + K
Sbjct: 342 HMRSKQGDVKDGENEPQVDSTGCFIPYN--------------LITQHSIPD--------K 379
Query: 1338 VLGDLVESSLGAILLDSG 1355
+ D VE+ +GA LL+ G
Sbjct: 380 SIADCVEALIGAYLLECG 397
>gi|426204654|gb|AFY13245.1| dicer-2, partial [Schistocerca gregaria]
Length = 357
Score = 130 bits (327), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 167/359 (46%), Gaps = 62/359 (17%)
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS--------F 1013
YF+ PELC II S + + LLPS++H+L L A EL ++ S
Sbjct: 6 YFN---PELCD--IIPLSAALCLKIHLLPSVLHKLTVLAAAYELCQMVPISKGSVLDYEM 60
Query: 1014 PE-------------GAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFL 1060
PE G ++ + +ALT C + F+ E LE LGD+FLK+AV LF+
Sbjct: 61 PENAGDIQLLNSDFGGCGLTLNDVEQALTAASCDDLFNSETLETLGDSFLKFAVSLFLFI 120
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNN----LQV--YIRDQPFDPCQF-------- 1106
+ + EG L+ + V+N + +A + LQ+ ++ D+ + P F
Sbjct: 121 HYKSHHEGTLSSIKMKVVSNWHFYNVAKGKDIGSKLQIHRFVPDETWVPPGFTVPQPVRR 180
Query: 1107 -FALGRRCPRICSK----ETERTIHSQYDGRAPDDL----NAEVRCSKGHHWLHKKTIAD 1157
F P K E E ++ D R +L N+E+ G + K++AD
Sbjct: 181 KFLSEHIAPEYLKKLNPSEIEHSMDQLVDMRNTWNLAMPNNSELFI--GVQTVSDKSLAD 238
Query: 1158 VVEALVGAFIDDSGFKAATAFLKWIGI--------QVEFEASQVTNICISSKSFLPLSAS 1209
+EAL G ++ G A A L +G+ + FE + S L
Sbjct: 239 ALEALTGVYLKAYGLSGAIALLNSLGVLPAKKASPHILFERPPERPLLQESLRHQYLDFH 298
Query: 1210 L-DMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLY 1265
L D LE L ++F RG LLQA HPS+ NR+ CYQRLEFLGDA+LD+L+TSY+Y
Sbjct: 299 LGDTEELEETLNYRFKDRGFLLQALTHPSWSDNRITDCYQRLEFLGDAILDFLVTSYIY 357
>gi|367055364|ref|XP_003658060.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
gi|347005326|gb|AEO71724.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
Length = 1118
Score = 130 bits (327), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 174/624 (27%), Positives = 270/624 (43%), Gaps = 109/624 (17%)
Query: 107 ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQIL 166
I FLAPTV+L +QQ +VI I G+ + + W ++ ++ +I+
Sbjct: 1 IAWFLAPTVSLAEQQFEVIRAQIPSVQSRLIRGADNVDA---WSTRPGVWDAVLRNTRIV 57
Query: 167 LYCLYHRFIKMELIALLIFDEC-HHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTA 222
+ D C H V N A++M++ Y P+ K VP I G+TA
Sbjct: 58 VAA----------------DLCVAHNPVGKNS-VARLMREHYFPNKAKGLPVPHILGLTA 100
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAED-LESFVSSPVVRVYQYGPVINDT 281
SP++ +NL + LE LDA + D L + V+ P + V YG + D
Sbjct: 101 SPLM------TSNL-GDLEVLEQTLDAVCKTPSKHRDELMAQVNRPEMMVVSYGAIPVDE 153
Query: 282 SSSYVTCS-EQLA------EIKREQYIS--ALSRKLHDHQSLRNT--------TKQLNRL 324
+++ T + E+L +I R+ I AL+R + Q LR Q+
Sbjct: 154 AAAQPTPAMERLMKAYLGLDITRDPDILHLALNRTPRNEQRLRKLFASRKTYCQTQMESF 213
Query: 325 HDSMKFCLENLGVCGA---LHA--SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE 379
+ ++LG A +H S +L D++ + EG+++ R+ +A
Sbjct: 214 YRRACDMCQHLGPWAADYYIHKVISTLLQDTDDSAQ------EGDSLTVKQRRYLVEALT 267
Query: 380 VFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARA 439
G A + + K++ L+GIL R Q + IVFV T
Sbjct: 268 PVGP-----GPAPQIPTA-------LAPKVVALLGILE--RYQGNPVGIVFVKERATVAV 313
Query: 440 LSYILQ-NLKFLASWRCHFLVGVNA------GLKSMSRNAMKSILEKFRSGELNLLVATK 492
LS+IL + + +R +VG +A +S+ L+ FR G +NLLVAT
Sbjct: 314 LSHILAVHPRTAGRYRVGSMVGTSATPGRRQDFLDLSQKEYILSLQAFRKGTINLLVATS 373
Query: 493 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV----DSGNQRELDLIK 548
V EEG+D+ C LVI FD E + SFIQ RGRARM S+ LV D ++ LDL +
Sbjct: 374 VLEEGIDVPACNLVICFDRLENLKSFIQRRGRARMSASQLYLLVEDDSDKSSRIWLDLER 433
Query: 549 NFSK--EED-RMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPH 605
+ E+D R N+E+ + SD + + + D +GA I+ L +C+ L
Sbjct: 434 EMKRKYEDDMRENKELEEIEKSDVL---DYPVLRDDKTGAQITIQDAKQHLEHFCATLST 490
Query: 606 DEFFNPKPKFYYFDDLGGTI----------CHIILPAN-AP----IHQIVGTPQSSMEAA 650
+F + P FY DL G + LP + AP I P S A
Sbjct: 491 RKFVDWSP-FYVVHDLEGNPIDARQRGLRKATVHLPVSLAPELRCFESIYAWP--SEANA 547
Query: 651 KKDACLKAIEDLHKLGALNDYLLP 674
KDA +A L+++G +N +LLP
Sbjct: 548 CKDAAFQAYAKLYEVGLVNRHLLP 571
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 28/300 (9%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+P+I+H LE LVA K LL + +++ A++T + ER+E LGD
Sbjct: 826 LIPAIVHALEAHLVA---KDLLESRLERTGITDLSLVVMAISTSAARGPTDYERIEFLGD 882
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ + + EG L+ + V+NS L + A L YI +
Sbjct: 883 SILKFCTTINCAAKYLKYPEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTL------ 936
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
T+H D L ++ L KT+ADVVEAL+ A
Sbjct: 937 ----------------TLHKWRPTYVEDLLENPPPATRTRM-LSTKTLADVVEALIAASY 979
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
G A A + + E+++ + + +++ + M LE L+G+ F +
Sbjct: 980 ISGGIPKALACMSLFLPEFEWKSIEQGREILYNEAPHDEPLPVTMRPLESLIGYTFTKKA 1039
Query: 1228 LLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LL++A HPS G RLEFLGDA+LDY++ + L+S L L LR+ LVN
Sbjct: 1040 LLVEAMTHPSCTGPGIRASLDRLEFLGDAILDYIVVNRLFSDPAGLDNSTLHLLRTALVN 1099
Score = 46.2 bits (108), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+R+EFLGD++L + T + Y K G L+ L+ +V+N AV+ ++++
Sbjct: 874 YERIEFLGDSILKFCTTINCAAKYLKYPEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVH 933
Query: 1305 DSNVLSETINNYVDYMI--TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGF 1356
+ L + YV+ ++ P +TR K L D+VE+ + A + G
Sbjct: 934 KTLTLHKWRPTYVEDLLENPPPATRTRMLS---TKTLADVVEALIAASYISGGI 984
>gi|116205049|ref|XP_001228335.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
gi|88176536|gb|EAQ84004.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
Length = 1227
Score = 130 bits (327), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 172/636 (27%), Positives = 267/636 (41%), Gaps = 117/636 (18%)
Query: 100 IRKPQKSICI--FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYE 157
++ PQ ++ I FLAPTV+L +QQ + I I GS + + W + ++
Sbjct: 86 VKNPQLTVQIVWFLAPTVSLAEQQFEAIRAQIPGVQSKLILGSDSVDA---WSTQPGVWD 142
Query: 158 VLVM---IPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP---DI 211
+++ IPQ+ L H+A K +P A++MK+ Y P +
Sbjct: 143 AVLLNTPIPQLTLIA-------------------HNA--KGRNPIARLMKEHYVPSKAEG 181
Query: 212 MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAED-LESFVSSPVVR 270
+ VP I G+TASP++ ++NL + LE LDA + D L + V+ P ++
Sbjct: 182 LPVPHILGLTASPLM------RSNL-SDLEVLEQTLDAVCKTPSKHRDELMAQVNRPEMK 234
Query: 271 VYQYGPVIN---DTSSSYVTCSEQLA----EIKREQYISALSRKLHDHQSLRNTTKQLNR 323
V YG +IN DT + + A +I+++ Y+ R L ++ R +
Sbjct: 235 VTAYGSMINPETDTEPTPTMAKLKSAYLELDIRQDPYV----RHLLTDKTPRGRARLKKV 290
Query: 324 LHDSMKFCLENLGV-----------CGALHASYILLSGDETMRNELIEAEGNTIDDSLCR 372
L +C + CG A Y + + +I A + D
Sbjct: 291 LLTKQTYCRSQMEAFCRGAFDICKSCGPWAADYYI--------HRVISA---FVKDPAPV 339
Query: 373 FASQASEVFAAICRRDGIASDLSCIEVLKEP----FFSKKLLRLIGILSTFRLQQHMKCI 428
+E A R+ + + L ++ P S K+ L+G L + Q++ I
Sbjct: 340 APGHTNENLAEQERKYLVEAFLK-VDAQAPPEIPTTLSPKVQALLGALESH--QENPFGI 396
Query: 429 VFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVN------AGLKSMSRNAMKSILEKFR 481
VFV T LS+IL + K +R +VG + +S+ L FR
Sbjct: 397 VFVRERATVAVLSHILAVHPKTSHRYRVGSMVGTSRVPGRRQDFLDLSQKEYLLSLLSFR 456
Query: 482 SGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD---S 538
G +NLLVAT V EEG+D+ C LVI FD P+ + SFIQ RGRARM S LV+
Sbjct: 457 KGTINLLVATSVLEEGIDVPACNLVICFDKPDNLKSFIQRRGRARMSASRLYLLVEDEAD 516
Query: 539 GNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVD-------SSGACISAGY 591
G+ R + E M R+ D + E I +D +GA I+
Sbjct: 517 GSSR------GWQNLEQEMKRKYEDDMRENQRLEEIENIEDMDYPVLRSQETGAQITILD 570
Query: 592 GVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPA--NAPIHQIVG-TPQ---- 644
S L +C+ L +F + P FY DL G P A +H V P+
Sbjct: 571 AKSHLEHFCATLSTRKFVDWSP-FYVVHDLEGNPVDPHQPGLRKATVHLPVSLAPELRCF 629
Query: 645 SSMEA------AKKDACLKAIEDLHKLGALNDYLLP 674
S++A A KDA +A L+++G +N LLP
Sbjct: 630 QSLQAWTSEANACKDAAFQAYAKLYEVGLVNHNLLP 665
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 133/302 (44%), Gaps = 30/302 (9%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
++P+I H LE LVA K LL + + +++ A+T + ER+E LGD
Sbjct: 916 MIPAITHALEVHLVA---KDLLESRLEQTGITDLSLIVTAITASAARGPTDYERIEFLGD 972
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ + + EG L+ + V+NS L + A L YI + F
Sbjct: 973 SILKFCTTINCSATYLKFPEGCLSPLKDKIVSNSRLFRAAVDFGLDRYIIHKAF------ 1026
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
T+H ++ +DL + + K IADVVEAL+G
Sbjct: 1027 ----------------TLH-KWRPTYVEDLIENPPSATETRRISTKIIADVVEALIGTAF 1069
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
G A A + V + + + + +++ M LE L+G+ F +
Sbjct: 1070 VSGGISKALACMSLFLPDVAWNSIEYGREVMYNEAPDDEPLPRTMRQLESLVGYTFTKKA 1129
Query: 1228 LLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVY--PKLKPGQLTDLRSML 1283
LL++A HPS N G RLEFLGDA+LDY++ + L+++ L+ L LR+ L
Sbjct: 1130 LLVEAMTHPSCNGPGIRASLDRLEFLGDAILDYVVVNKLFAISDPAPLENSSLHLLRTAL 1189
Query: 1284 VN 1285
VN
Sbjct: 1190 VN 1191
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+R+EFLGD++L + T + Y K G L+ L+ +V+N AVD +++I
Sbjct: 964 YERIEFLGDSILKFCTTINCSATYLKFPEGCLSPLKDKIVSNSRLFRAAVDFGLDRYIIH 1023
Query: 1305 DSNVLSETINNYVDYMI-TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
+ L + YV+ +I P S E + K++ D+VE+ +G + G +
Sbjct: 1024 KAFTLHKWRPTYVEDLIENPPSATETRR--ISTKIIADVVEALIGTAFVSGGIS 1075
>gi|357462175|ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 565
Score = 130 bits (326), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 17/198 (8%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGG-CYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
+E +L ++F ++ LL +AF H ++ G Y+RLE++GD+VL+ +IT + YP L P
Sbjct: 230 VEAILEYEFKNKLLLEEAFTHGTYGAENGLSYERLEYVGDSVLNLMITKEQFQAYPTLAP 289
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
G LT LR+ V+ + A VA+ +++L +L + I + T+ + E P
Sbjct: 290 GHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEF---------TKGIAEYP 340
Query: 1334 -------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIREL 1386
PK L D+VES++GAI +D G ++ TVWK+ L+PI+ + +Q +P+ EL
Sbjct: 341 LHSNGLIDVPKSLADIVESTIGAIFVDCGSSVETVWKVFKKLLEPIIDPNTIQRHPVTEL 400
Query: 1387 LELCNSYDLDLQFPSLKK 1404
E+C L LQF L K
Sbjct: 401 HEVCQKKSLKLQFRDLWK 418
Score = 48.5 bits (114), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 40/191 (20%)
Query: 990 PSIMHRLENLL-VAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDA 1048
P +H +E +L + K LL +F G T + S ERLE +GD+
Sbjct: 224 PPPLHEVEAILEYEFKNKLLLEEAFTHG-------------TYGAENGLSYERLEYVGDS 270
Query: 1049 FLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR-DQPFDPCQFF 1107
L + + F + T+ G LTR R+ V+ L ++A ++ L Y+R +P
Sbjct: 271 VLNLMITKEQFQAYPTLAPGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPL------ 324
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
LG + E +HS P K++AD+VE+ +GA
Sbjct: 325 -LGDQIQEFTKGIAEYPLHSNGLIDVP------------------KSLADIVESTIGAIF 365
Query: 1168 DDSGFKAATAF 1178
D G T +
Sbjct: 366 VDCGSSVETVW 376
>gi|326533632|dbj|BAK05347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 381
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 164/395 (41%), Gaps = 79/395 (20%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYP 1269
A +E LL ++F R LL +A H SF+ G YQRLEF+GDA L +++LY P
Sbjct: 44 ARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSNFLYLTNP 103
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYM 1320
+ PG L+ LR+ ++ + A VAV Y L + L + ++ D
Sbjct: 104 TVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQELEDDLG 163
Query: 1321 ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
ITP K PKVL D+VE+ A+ +D FN+ +WK+ +PI+ +
Sbjct: 164 ITPYGGSVFK----APKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAETIDE 219
Query: 1381 NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRI-- 1438
P+ L ELC + D++F S +KGG + +VF+ E + I
Sbjct: 220 QPVSTLHELCQKHGKDIKFKSWQKGGTTVV---------NVFVGGVLVGTGSSEQMGIAK 270
Query: 1439 --ASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKI 1496
A++ SKL G + +L + +G+
Sbjct: 271 LNATRDALSKLHGGGN-------QQVLTTG-------VGH-------------------- 296
Query: 1497 SEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTF 1556
G ++G + R + +L + C W P F KE+G +H + F +
Sbjct: 297 -----GLGVEVG---------ELRECKKKLIDQCNRKLWPKPIFKLEKEDGPAHDRTFVY 342
Query: 1557 RVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGML 1591
V VE + I +G+ ++ K A A+ ML
Sbjct: 343 SVQVETQG--GIWLTLGDRMSRVKDAENSGAQKML 375
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
S +RLE +GDA L A L+L + TV G L+ R+ ++ L ++A R++L +R
Sbjct: 78 SYQRLEFVGDAALGLAFSNFLYLTNPTVGPGALSTLRAANISTEKLARVAVRHDLYPLLR 137
Query: 1098 DQPFDPCQFFALGRRCPR--ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
R CPR + + ++ + + DDL + G + K +
Sbjct: 138 -------------RNCPRLDLLVGQFIESVKQELE----DDLG--ITPYGGSVFKAPKVL 178
Query: 1156 ADVVEALVGAFIDDSGF 1172
AD+VEA+ A D F
Sbjct: 179 ADIVEAIAAAVYVDCKF 195
>gi|326497771|dbj|BAK05975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 130 bits (326), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 164/395 (41%), Gaps = 79/395 (20%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYP 1269
A +E LL ++F R LL +A H SF+ G YQRLEF+GDA L +++LY P
Sbjct: 42 ARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSNFLYLTNP 101
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYM 1320
+ PG L+ LR+ ++ + A VAV Y L + L + ++ D
Sbjct: 102 TVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQELEDDLG 161
Query: 1321 ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
ITP K PKVL D+VE+ A+ +D FN+ +WK+ +PI+ +
Sbjct: 162 ITPYGGSVFK----APKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAETIDE 217
Query: 1381 NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRI-- 1438
P+ L ELC + D++F S +KGG + +VF+ E + I
Sbjct: 218 QPVSTLHELCQKHGKDIKFKSWQKGGTTVV---------NVFVGGVLVGTGSSEQMGIAK 268
Query: 1439 --ASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKI 1496
A++ SKL G + +L + +G+
Sbjct: 269 LNATRDALSKLHGGGN-------QQVLTTG-------VGH-------------------- 294
Query: 1497 SEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTF 1556
G ++G + R + +L + C W P F KE+G +H + F +
Sbjct: 295 -----GLGVEVG---------ELRECKKKLIDQCNRKLWPKPIFKLEKEDGPAHDRTFVY 340
Query: 1557 RVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGML 1591
V VE + I +G+ ++ K A A+ ML
Sbjct: 341 SVQVETQG--GIWLTLGDRMSRVKDAENSGAQKML 373
Score = 46.2 bits (108), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
S +RLE +GDA L A L+L + TV G L+ R+ ++ L ++A R++L +R
Sbjct: 76 SYQRLEFVGDAALGLAFSNFLYLTNPTVGPGALSTLRAANISTEKLARVAVRHDLYPLLR 135
Query: 1098 DQPFDPCQFFALGRRCPR--ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTI 1155
R CPR + + ++ + + DDL + G + K +
Sbjct: 136 -------------RNCPRLDLLVGQFIESVKQELE----DDLG--ITPYGGSVFKAPKVL 176
Query: 1156 ADVVEALVGAFIDDSGF 1172
AD+VEA+ A D F
Sbjct: 177 ADIVEAIAAAVYVDCKF 193
>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1520
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 129/283 (45%), Gaps = 40/283 (14%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASW-RCHFLVGVNAG------------LKSMSRNAMK 474
IVFV + A L+ IL + L RC LVG G + M +
Sbjct: 419 IVFVEQRHVAMCLAKILPRIPELREHIRCAELVGHGTGHQHKKNQPPTAQARGMGLARQQ 478
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
I+ FR G+LNLL+AT V EEGLD C +V+RFD + ++QSRGRAR S +
Sbjct: 479 DIVRSFREGKLNLLIATSVAEEGLDFPACDIVVRFDPVHHMVGYVQSRGRARTKTSAFVI 538
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDR-------------------TSSDAFTCSEE 575
+V +G + +N S+ E + + R D +
Sbjct: 539 MVQAGYDTHRERYRNLSESEPELKKVYQSREQLPQPEPEPSSESEEGEVEEEDPADIAVR 598
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAP 635
Y V S+GA ++ G + L++ CS LPHD++ P P YF D T+ LPA+ P
Sbjct: 599 ERYVVPSTGAALTYGSAIGLVNYLCSLLPHDQYTEP-PTPKYFGDYAATLD---LPASLP 654
Query: 636 I----HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ + G + S AK+ A+++LHKL +DYLLP
Sbjct: 655 LPLDKRRFRGPIRRSKREAKRAVAFMAVKELHKLNVFDDYLLP 697
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 122/223 (54%), Gaps = 12/223 (5%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
+ R YQ E+ ++A E N+I L TG GKT I++LLI + L + + +FL P VAL
Sbjct: 26 LPRNYQEEIFRRAQEGNVIAALDTGSGKTFISILLIKWMV-LQEHARDKVIVFLVPKVAL 84
Query: 118 VQQQAKVIEESI--GFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
V+QQA I + F+V+ F G L +W+K + +V+VM QI L L H
Sbjct: 85 VEQQASFISKHTPSSFRVKKFHGSLDLDLADRGNWQKSFEGSDVVVMTAQIFLNILTHSH 144
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
+E ++LLIFDECHH + NH Y +M++++ + P++FGMTASP+ AQ
Sbjct: 145 WSIEKVSLLIFDECHH--TRKNHAYNGVMREYFTLSTVHRPKVFGMTASPIWNP-KDAQG 201
Query: 235 NLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGP 276
S+ +LE L+A V +V E +L P+ + +Y P
Sbjct: 202 ----SLLTLEKNLNATVIAVREHLAELLEHSPRPLEIIKEYVP 240
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 206/433 (47%), Gaps = 32/433 (7%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
L P C +I+ F I ++ LLP + RL ++ A + L ++ ++L+
Sbjct: 954 LAPRDC-CRIVHFPPHIYNAFHLLPKVCRRLTDVYRAQAQRFELGLP-----PIADDLLI 1007
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+A + ++ +R E LGD+ LK V H+ + EG+L++ R ++V+N LL
Sbjct: 1008 EAASLPTTLHTWNNQRFETLGDSVLKLGVTVHIMNKYPHRHEGQLSKLRQSSVSNRTLLA 1067
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRC-PRICSKETERTIHSQYDGRAPDDLNAEVRCS 1144
A L++++ + Q R P C+ + + G A + +++
Sbjct: 1068 RAKEIGLEIFLNSE----TQSLQSWRYVHPSECTASASAALTA---GTA-ESPSSKAPAR 1119
Query: 1145 KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
+ ++++ D +EA +GA G A +G+ E +
Sbjct: 1120 RAKREFPRRSLQDCMEATLGAAFYHGGMDMALRAGTALGLSFGGELPWCARY---GRVPD 1176
Query: 1205 PLSASLDMATLEILLGHQFLHRG-LLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITS 1262
P A L+ LG++F HRG LL++A HPSF G YQRLEFLGDA+LD ++
Sbjct: 1177 PSPAPPLFEELQSGLGYEF-HRGDLLVEAATHPSFATSAGASYQRLEFLGDALLDVVVMR 1235
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNYVDYMI 1321
YL+ YP+ GQL+ RS V A+VAV + + ++ L+ ++ LS I+ +V ++
Sbjct: 1236 YLFHKYPRATSGQLSVARSRAVCGPTLASVAVKRLNLHQILLINNVELSIAISRHVP-LL 1294
Query: 1322 TPSSTREV-----KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF- 1375
T+E+ K P PK L D++ES GA+L+DS +N ++ + +L+
Sbjct: 1295 QNLPTQEIVLKAWKYDP--PKALSDIMESVFGAVLVDSAYNYEKAAAVVEEVMSEVLELI 1352
Query: 1376 -SNLQLNPIRELL 1387
++ +P+ +L+
Sbjct: 1353 SPSVARDPVTDLM 1365
>gi|291235953|ref|XP_002737903.1| PREDICTED: Dicer Related Helicase family member (drh-1)-like
[Saccoglossus kowalevskii]
Length = 996
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 243/549 (44%), Gaps = 60/549 (10%)
Query: 28 VEECSVAVSGVGFGAESSVGA---QKTDKDPKQ---IARKYQLELCKKAMEE-NIIVYLG 80
VE+C++ +S + SS A QK P I R YQ EL A N I+
Sbjct: 287 VEKCTLEMSKMLTNQTSSTVAGSIQKVIVTPNYEELIPRSYQEELGGPACRGLNSIICAP 346
Query: 81 TGCGKTHIAVLLIYE-----LAHLIRK---PQKSICIFLAPTVALVQQQAKVIEESIG-F 131
TG GKTH+A+++ LA RK + IFL + L+ Q K ++ + F
Sbjct: 347 TGTGKTHVAMMIAKRHMENALASQARKGFTTSGAKVIFLVHRIPLLNQTYKRLKMYLPLF 406
Query: 132 KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHA 191
++ G S S+ +EK ++ ++++ IL L H M +L+I DECHHA
Sbjct: 407 EIGKLSGASS---SNVTFEKLVEINDIIITTTDILKNSLKHGKSSMSTFSLIIIDECHHA 463
Query: 192 QVKSNHPYAKIMKDFYKP---DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLD 248
NHPY IM + K + +P+I G+TASP G + A + NL
Sbjct: 464 M--KNHPYNIIMAQYLKEKFDNKSSLPQIVGLTASPGTGSNSELGAARDHILKLCANLDA 521
Query: 249 AKVYSVEDAED---LESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISAL- 304
+ +V++ + LE FV+ P P D V E +A I+ + + +
Sbjct: 522 GEFVTVKNPRNKAELEKFVTDPDKVTTITTPRNPDPFRGKV--EEIMANIEGKANFTNVC 579
Query: 305 -SRKLHDHQS---LRNTTKQLNRLHDSMKFC------LENLGVCGALHASYILLSGDE-- 352
R +++ L+ N+ H++ + C + L S LL+ DE
Sbjct: 580 PPRGTQPYETFIILQRDEAIANKNHETAQCCDHLNEYNKGLLTSDVCRMSDGLLNIDEFY 639
Query: 353 TMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASD--LSCIEVLKEPFFSKKL 409
R + + ++D L R + S + ++F A + + + ++ + LK+ K
Sbjct: 640 NERRRRGQHKNTPMEDYLYRLYRSNSGDLFEASDKENDHPNPKVVALKQALKQEVQEKG- 698
Query: 410 LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV-NAGLKSM 468
+ FR I+FV V A A+ ++ + L R L GV AG +SM
Sbjct: 699 -------NDFR------GIIFVKTRVLASAVLDCIKEDQELQMLRPSRLTGVKTAGDESM 745
Query: 469 SRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP 528
++ S L KF G+ LL+AT V EEGLDI+ C +VIR++ S Q+RGRAR
Sbjct: 746 TQAEQDSNLRKFADGDCKLLIATSVAEEGLDIKECHMVIRYNYATNEISMRQARGRARAT 805
Query: 529 QSEYAFLVD 537
QS+ F+ D
Sbjct: 806 QSKEHFIGD 814
>gi|348569861|ref|XP_003470716.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Cavia
porcellus]
Length = 914
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 160/564 (28%), Positives = 251/564 (44%), Gaps = 73/564 (12%)
Query: 59 ARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTV 115
AR YQLEL A E +N I+ TGCGKT +++L+ HL++ PQ K +F A V
Sbjct: 244 ARNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEH--HLLKFPQGRKGKVVFFANHV 301
Query: 116 ALVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
+ +QQ V E +G+ V G + + I+ +++V+ PQIL+ L +
Sbjct: 302 PVYEQQKTVFSRYFERLGYSVTGISGAT---AEKVPVAETIENNDIIVLTPQILVNNLKN 358
Query: 173 RFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVG 227
I + + L+IFDECH+ +HPY IM ++ + + +P++ G+TAS VG
Sbjct: 359 GTIPSLSVFTLMIFDECHNTS--KHHPYNMIMFNYLDQKLGESSDPLPQVIGLTASVGVG 416
Query: 228 KGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGP--------- 276
+ + + I L LDA V + E+ E+LE V P + P
Sbjct: 417 DAKNIEEAMA-YICKLCASLDASVIATVKENLEELEQVVYKPQKISRKVEPRTTNKFKLI 475
Query: 277 ---VINDTSSSYVTCSEQLAEI-----------KREQYISALSRKLHDHQSLRNTTKQLN 322
++ +T + SE+L + K EQ+I A+ H++ R L
Sbjct: 476 LCELMKETEYLAKSISEELGYLFQIQDRVFGTQKYEQWIVAV------HKACR-----LF 524
Query: 323 RLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFA 382
++ D E +C A+ Y+ S + LI +E + D+L S V
Sbjct: 525 QMPDKE----EESRICKAM---YLYTSHLRKYNDTLIISEDAQMKDALNYLKDFFSNVRT 577
Query: 383 AICRRDGIASDLS-CIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARAL 440
A D I DL+ EV + +LR IL + L + I+FV AL
Sbjct: 578 AAF--DDIEQDLTRRFEVYT--CVTSCVLRTHLILQEEYHLNPETRTILFVKTRALVDAL 633
Query: 441 SYILQNLKFLASWRCHFLV--GVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGL 498
++ L + L G + M+ A K +L+ FRS N+L+AT V +EG+
Sbjct: 634 KKWIEENSALNFLKPGILTGRGKTSNKTGMTLPAQKCVLDTFRSNGDNILIATSVADEGI 693
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN 558
DI C LVI ++ V IQ+RGR R S+ L + + E + I N KE+ MN
Sbjct: 694 DIAQCNLVILYEYVGNVIRMIQTRGRGRAKGSKCYLLSSNADVIEKEHI-NIIKEK-MMN 751
Query: 559 REIMDRTSSDAFTCSEERIYKVDS 582
I + D T ++RIY + +
Sbjct: 752 DSISRLQTWDEVT-FQKRIYHIQN 774
>gi|156368540|ref|XP_001627751.1| predicted protein [Nematostella vectensis]
gi|156214670|gb|EDO35651.1| predicted protein [Nematostella vectensis]
Length = 199
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 106/189 (56%), Gaps = 18/189 (9%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYP 1269
+ E +G++F ++ L+QA H S+ NRL CYQRLEFLGDA+LD+L+T +YS
Sbjct: 1 LQGFEKRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNT 60
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--------- 1320
L PG+LTDLR LVNN FA +AV F K L S I +VD++
Sbjct: 61 NLDPGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQ 120
Query: 1321 ---ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF-- 1375
+T S+ E EG PKVLGD+ ES GAI LDSG +L W++ L P +
Sbjct: 121 DPFLTLSNDDE--EGIEAPKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRMLKPYIDAYS 178
Query: 1376 SNLQLNPIR 1384
+++ NP+R
Sbjct: 179 ADVPKNPVR 187
Score = 44.7 bits (104), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 1016 GAEVSAEM-LLKALT-TEKCQERFS--LERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
G E S ++ L++ALT Q R + +RLE LGDA L + V ++ + +D GELT
Sbjct: 9 GYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLDPGELT 68
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDG 1131
R VNN+ ++A ++ + P F +G + +E R I +
Sbjct: 69 DLRQALVNNNIFAEIAVKHGFNKSLFQMS--PEWFNKIGVFVDHVKEREA-RGIQDPFLT 125
Query: 1132 RAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
+ DD +G K + D+ E++ GA DSG
Sbjct: 126 LSNDD-------EEGIE--APKVLGDIFESVAGAIFLDSG 156
>gi|168177328|pdb|3C4B|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 129 bits (324), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 17/192 (8%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T E + ++F ++ LLQAF H S+ N + YQRLEFLGDA+LDYLIT +LY +
Sbjct: 17 TFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQH 76
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
PG LTDLRS LVNN FA++AV ++K+ S L I+++V + + + +
Sbjct: 77 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEXQGXDS 136
Query: 1332 GPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS- 1376
R PK GD+ ES GAI DSG +L VW++ P++ KFS
Sbjct: 137 ELRRSEEDEEKEEDIEVPKAXGDIFESLAGAIYXDSGXSLEVVWQVYYPXXQPLIEKFSA 196
Query: 1377 NLQLNPIRELLE 1388
N+ +P+RELLE
Sbjct: 197 NVPRSPVRELLE 208
>gi|390601319|gb|EIN10713.1| ribonuclease III [Punctularia strigosozonata HHB-11173 SS5]
Length = 704
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 213/498 (42%), Gaps = 59/498 (11%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QPLL+ L N L+ ESH+ + + L P+LC I S I + LP
Sbjct: 116 QPLLQVTRLGGSVNFLNPLLSGPDESHKADAKY--LIPQLCPKFSIPAS--IFKTGLYLP 171
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFL 1050
S+ R++ +L+ EL + V ++LL+A+T F+ ERLE+LGDAFL
Sbjct: 172 SLARRIDEMLLVKELNAEILHDL-----VGEQLLLEAITPPSASAEFNYERLELLGDAFL 226
Query: 1051 KYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF-----DPCQ 1105
KY ++++ EG L R + N L+ A R L YI+ F P
Sbjct: 227 KYLASVYVYVTRQG-GEGALHNARQKLIANDYLMDCAVRVGLPPYIQSAAFAYKYWAPHN 285
Query: 1106 FFALGR-----RCPRICSKETERTIH--SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
L R C E++I + D P A+ + WL K IADV
Sbjct: 286 VRVLARPTDDMTCGPSQDANGEKSIEEPKKEDAGIPSKRKAKFDPNTS-QWLGHKAIADV 344
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS------FLPLSASLDM 1212
VEA++GA + G A + +GI + +S +S+ LP S +
Sbjct: 345 VEAIIGAAYLNGGSDNALQTVLDLGIDLSGISSWTDFRRLSASDPGHPQLVLP---SQSV 401
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCY----QRLEFLGDAVLDYLITSYLYSVY 1268
L +LG R LL A + L G QRLEFLGDA+L+YL+ YLYS
Sbjct: 402 VELSRILGRPVNDRQLLAHAL---ACGGLTGAVPILRQRLEFLGDAILEYLLIRYLYSKN 458
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFD-SNVLSETINNYVDYMIT----- 1322
PG L+ + +V+N A A + V Y+ L+ D + L T NY ++
Sbjct: 459 QSSSPGILS---AGMVSNDALAALCVTSGIYEHLLVDRRSELYRTTQNYRKLILQRQQAE 515
Query: 1323 PSSTREVKEGPR-------CPKVLGDLVESSLGAILLDSGFNLNTVW----KIMLSFLDP 1371
++ R P PKVL D +E++LGA+ + GF + ++ F D
Sbjct: 516 NAAARAELRSPGQFWHDVPAPKVLSDAMEATLGALYVSDGFTADGTQIVFERLFKPFYDR 575
Query: 1372 ILKFSNLQLNPIRELLEL 1389
+ L +P + L EL
Sbjct: 576 HVTLQTLSHHPNKILAEL 593
>gi|242090101|ref|XP_002440883.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
gi|241946168|gb|EES19313.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
Length = 377
Score = 128 bits (322), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 162/383 (42%), Gaps = 62/383 (16%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
+E LL +QF R LL +A H SF+ YQRLEF+GDA L +++LY P L PG
Sbjct: 45 VERLLRYQFCDRALLEEALTHQSFSDGAFSYQRLEFVGDAALGLAFSNFLYLTNPTLGPG 104
Query: 1275 QLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP- 1333
L+ LR+ ++ + A VAV Y L L + +++ + ++ P
Sbjct: 105 ALSTLRAANISTEKLARVAVRHDLYPLLRRKCARLDLLVGQFIES-VKQEVMHDLATAPY 163
Query: 1334 -----RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLE 1388
+ PKVL D+VE+ A+ +D F+L +WK+ +P++ + P+ L E
Sbjct: 164 GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPVITAETVDEQPVTTLHE 223
Query: 1389 LCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLK 1448
LC + QF + +KGG + +VF+ L E Q++ +KL
Sbjct: 224 LCQKHGKVAQFETWQKGGMTMV---------NVFVGGEMVGLGSSE------QKVIAKLN 268
Query: 1449 AAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIG 1508
AA + +LIG + + + + + +++
Sbjct: 269 AA----------------RDALGKLIGGAKQQVLINGIANGLVDEI-------------- 298
Query: 1509 SPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKI 1568
++ R + +L E C W P F KE G +H + F V+++
Sbjct: 299 --------VELRECKQKLTEQCIGKHWPKPIFKLEKEGGPAHER--NFVCSVQVDTKTGT 348
Query: 1569 IECIGEPQAKKKGAAEHAAEGML 1591
IG+P ++ K A AA+ M+
Sbjct: 349 FVTIGDPMSRVKDAENSAAQKMV 371
Score = 43.9 bits (102), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQE-RFSLERLE 1043
+LSL + R E A+ ++ LL F + A +L +ALT + + FS +RLE
Sbjct: 28 ALSLPGFVADRAE---AAVRVERLLRYQFCDRA-----LLEEALTHQSFSDGAFSYQRLE 79
Query: 1044 ILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP 1103
+GDA L A L+L + T+ G L+ R+ ++ L ++A R++L +R
Sbjct: 80 FVGDAALGLAFSNFLYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLLR------ 133
Query: 1104 CQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK--GHHWLHKKTIADVVEA 1161
R+C R+ + Q+ ++ ++ + G K +AD+VEA
Sbjct: 134 -------RKCARL------DLLVGQFIESVKQEVMHDLATAPYGGSVVKAPKVLADIVEA 180
Query: 1162 LVGAFIDDSGF 1172
+ A D F
Sbjct: 181 IAAAVYVDCKF 191
>gi|168021275|ref|XP_001763167.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162685650|gb|EDQ72044.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 961
Score = 128 bits (321), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 180/398 (45%), Gaps = 65/398 (16%)
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y +++ GN + +N E
Sbjct: 24 KEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNLQHEAFFRNAKNSE 83
Query: 555 DRMNREIMDRTS-----SDAFTCS----EERIYKVDSSGACISAGYGVSLLHRYCSKLPH 605
+ + +E ++RT +A S E IY+V ++GA +S V L+H YCS+LP
Sbjct: 84 ETLRKEAIERTDLGEKRENAILASIDIGEGEIYQVPATGAVVSMNSAVGLIHFYCSQLPS 143
Query: 606 DEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIE 660
D + +P+F +D G I C + LP NAP + G P+ + L+ ++
Sbjct: 144 DRYSLLRPEFIMNKIEDQRGAIRYSCRLQLPCNAPFEAVEG-PEFCV--------LEGLQ 194
Query: 661 DLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLR------- 713
+H++GA D LL + + E + S + +S G E + + +L+
Sbjct: 195 KMHEMGAFTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIADILKGDRIVAE 254
Query: 714 -----QSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARG 768
+ +K P M + D I R F K ++ L + ++L
Sbjct: 255 KDSDTKEGSKISLPNPTLLITMSWKKRDLDAIRR----FRKRHCCSNSQVLTMTINLFVA 310
Query: 769 RSVMTK----------LVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSS 818
R++ T+ L + + + F + ++LD N E D +
Sbjct: 311 RTMTTRASLKFFGDLNLSLQELTELKSFHVRLMSIVLD---VNVEPATTRWD------PA 361
Query: 819 TFYLLLPVIFHKNS------VDWKIIRRCLSSPVFGTP 850
YL PV+ HK++ VDW ++RR + + + P
Sbjct: 362 KAYLFAPVL-HKDASDPKDLVDWVVMRRTIETDSWSNP 398
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 49/84 (58%)
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALT CQE FS ER E+L DA+L++ V LFL + EG+LTR R V+NS L +
Sbjct: 512 ALTAASCQETFSYERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQH 571
Query: 1087 AARNNLQVYIRDQPFDPCQFFALG 1110
A LQ YI+ F P ++ A G
Sbjct: 572 ALEKGLQSYIQADRFAPSRWAAPG 595
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 133/372 (35%), Gaps = 84/372 (22%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+R E L DA L+++++ L+ +P GQLT +R +V+N A+++ ++
Sbjct: 524 YERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHALEKGLQSYIQA 583
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPK------------VLGDLVESSLGAI-- 1350
D S + + P+ ++++G K ++G L + A+
Sbjct: 584 DRFAPS----RWAAPGVPPAFDEDLRDGDDSDKESKPEVEREVVEIVGRLTDLRAAAVNN 639
Query: 1351 ---------------LLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDL 1395
L L T ++ L P++ L ++P+R L E C
Sbjct: 640 ENFARVAVKHSYHLHLRHGSTALET--QVFEPLLQPMVSPETLPIHPVRGLQERCQQEAE 697
Query: 1396 DLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPK 1455
L++ + E V G SA +K A ++ ++ KLK
Sbjct: 698 GLEYKVSRAESVATVEVYVDGVQIGSTQSA-----QKKMAQKLGARNALVKLK------- 745
Query: 1456 TKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTG 1515
D+ I V A +N + G S G + T
Sbjct: 746 ---------------------DKEVIKVKAEAEN-------GDLNAGKSSKNGHTNFT-- 775
Query: 1516 GLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEP 1575
R + +LC W P + C E G +H K FTF V V EC+GEP
Sbjct: 776 -------RKTINDLCLKRQWPMPQYKCVLESGPAHAKKFTFSVRVLTTTDGWTEECVGEP 828
Query: 1576 QAKKKGAAEHAA 1587
A K A + AA
Sbjct: 829 MASVKKAKDSAA 840
>gi|405966016|gb|EKC31344.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 1018
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 236/524 (45%), Gaps = 55/524 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVAL 117
R+YQ EL A +N I+ TG GKT +AV +I + L + + +K I F+ L
Sbjct: 322 RQYQNELALPAQRGQNCIIIAPTGSGKTFVAVKIIKHHLENREIQREKKIA-FVVEKNNL 380
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
QQ++ I + K++ G + R + D + Q++V V+ Q+L+ + R +++
Sbjct: 381 ATQQSETINRHVTCKLKVVSGDTMRDEDFKDLAVLLSQFDVFVITAQMLVNAMDKRNLRI 440
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI------MKVPRIFGMTASPVVGKGAS 231
E +L+IFDECHH H + K M ++ + + +P+I G TAS VGK A+
Sbjct: 441 ESFSLIIFDECHHCH--GGHSFYKTMIPYHDKKLEDPEERIILPQIVGFTASIGVGK-AN 497
Query: 232 AQANLPKSINSLENLLDAK--VYSVEDAEDL--------ESFVSSPVVRVYQYGPVIND- 280
Q + I ++ LDA V E+ +L + + P ++ Q+G +I D
Sbjct: 498 TQGQVVNHIKTMMANLDADALVSVKENYFELVTKMNTPDNTILKIPKRKIDQFGAIIKDL 557
Query: 281 ---TSSSYVTCSEQLAEIK---------REQYISALSRKLHDH--QSLRNTTKQLNRLHD 326
T +++L + E+Y L L D ++ R+ + L +
Sbjct: 558 MVKTEDCLALANDKLPDKNALSPPSTKGNEEYTQWLQTSLMDAGVRADRDLSPFLFTIRK 617
Query: 327 SMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
++ E L + AS L + +++ I G I+ E IC
Sbjct: 618 YLEIYNEALIIHSNARASDALCYILQNIQDLQISDTGTEIEIRAKTLFENVREEL-NICA 676
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
D D C E P K L+ I IL T R + +M+ IVFV V A ++ ++
Sbjct: 677 TD----DQKCEE---NPLLMK--LKEI-ILETHREESNMRGIVFVRTRVVADIIASWMKE 726
Query: 447 LKFLASWRCHFLVGVNA-GLKSMS-RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
L + G A G S ++ + +E F G+ ++VAT + EEGLDI+ C
Sbjct: 727 TDELKQIKARKYTGAQARGTDGGSTKSKQRETIELFTKGDFKVIVATTIAEEGLDIEECN 786
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN----QREL 544
LV+++D + S IQ++GR R S + F++ S N +REL
Sbjct: 787 LVVKYDYAGNLISQIQAKGRGRAVNSRF-FILASENKCVAEREL 829
>gi|198428257|ref|XP_002120168.1| PREDICTED: similar to Ddx58 protein [Ciona intestinalis]
Length = 926
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 212/528 (40%), Gaps = 90/528 (17%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL ++A++ N ++ TG GKT +A + E HL R P I +FL P V LV
Sbjct: 262 RNYQLELAEQALQGNNSLIVAPTGTGKTLVAQHICTE--HLRRNPNSKI-VFLVPRVVLV 318
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+QQ + + ++ C S ++ I +++ M PQIL L +
Sbjct: 319 EQQHDAFDSQMKYEQGMLCKISSENTTNAAPNFLIMGHKITFMTPQILFNYLEKDCDFIN 378
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASPVVGKGASA 232
+ LLI+DECHHA PY IMK Y ++ K +P++ GMTASP VG S
Sbjct: 379 ELGLLIYDECHHAM--KGDPYNSIMK-VYHDNLTKYNGAKPLPQVIGMTASPGVGGAKSV 435
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
QA L NL + ++PV VI + +E
Sbjct: 436 QAATQHIKRLLANL---------------NVTTAPV-------EVIENKKELGKHTTETT 473
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE-----------NLGVCGAL 341
EI+R + RK Q N +N++ +++K E NL
Sbjct: 474 CEIRR------IDRKKTQFQE--NMVTLINKIWENLKIEFEKAENEVKDIDTNLKAKPGT 525
Query: 342 HA----SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC- 396
A L T+RN + + L +A E ++ + S +C
Sbjct: 526 QAFEAWCVQLRESSSTLRN-------DKLSQRLQEYAQHLREYNNSLMIDYDLTSTEACD 578
Query: 397 ----------------IEVLKEPFFSKK-------LLRLIGILST-FRLQQHMKCIVFVN 432
+E L E + K+ L +L IL+ F KCI+FV
Sbjct: 579 YVTQFWCNACTTVVPELEQLHEDYAPKREYHTSPILRKLFEILTAEFVDFPESKCIIFVR 638
Query: 433 RIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATK 492
A+AL L + + VG +AG M+R + + FR G ++VAT
Sbjct: 639 TRCIAKALVTCLMEDFYDLKPKQLTGVGASAGDGGMTRVEQEDTISSFRDGSTKIIVATS 698
Query: 493 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
V EEG DI C LVI ++ +Q +GR R +S+ L G+
Sbjct: 699 VAEEGFDIPACNLVIAYNYSTNEIGHVQRQGRGRAKESKMFLLAYEGS 746
>gi|189441606|gb|AAI67373.1| dicer1 protein [Xenopus (Silurana) tropicalis]
Length = 811
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 165/380 (43%), Gaps = 67/380 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 436 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEVEFRK 491
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 492 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKGRARAPISNY 551
Query: 533 AFLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------ 576
L DS D IK F EED + +I+ S + C
Sbjct: 552 IMLADS------DKIKAF--EEDLKTYKAIEKILRNKCSKSIDCGNTESEPIVDDDEIFP 603
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICHIILPA 632
+ + D ++ + ++RYC++LP D F PK K F D G + LP
Sbjct: 604 PYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTREFPD-GLYRSTLYLPI 662
Query: 633 NAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPML 686
N+P+ IVG P + A + L + LH++G L+D+L+P + D
Sbjct: 663 NSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMPVGKETVKYEEELDLHDE 722
Query: 687 FSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD-------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 723 EETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQPCYLYVIGMVLTTPLPDELNFRRRK 782
Query: 736 --PADRIYREFGLFVKSLLP 753
P + R FG+ +P
Sbjct: 783 LYPPEDTTRCFGILTAKPIP 802
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 17/242 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L +G GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNTKRTVFLVNSEK 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC----DWEKEIDQYEVLVMIPQILLYCLYH 172
V QQ + KV + S + K+ C W E + ++VLVM I L L
Sbjct: 95 QVSQQVSAVRTHTDLKVGEY---SDQEKTQCWAKERWYLEFETHQVLVMTCHIFLNVLKS 151
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
+ + I LL+FDECH A +HPY +IMK PRI G+TAS + G
Sbjct: 152 GNVSLSNINLLVFDECHLA--IQDHPYREIMK--ICESCQPCPRILGLTAS--ILNGKCD 205
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
+L + I LE +L + + D L+ + S P V GP I D S Y +L
Sbjct: 206 PRDLEEKIQKLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYI-DKSGLYQRLLNEL 264
Query: 293 AE 294
E
Sbjct: 265 DE 266
>gi|290989569|ref|XP_002677410.1| hypothetical protein NAEGRDRAFT_48963 [Naegleria gruberi]
gi|284091017|gb|EFC44666.1| hypothetical protein NAEGRDRAFT_48963 [Naegleria gruberi]
Length = 1214
Score = 127 bits (319), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 234/561 (41%), Gaps = 133/561 (23%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK-----------SIC 108
R YQLEL +++++ N I L TG GKT +A LLI +L H K + S C
Sbjct: 30 RAYQLELLRESIDGNSICILPTGTGKTLLACLLIDQLLHQNDKKEYMGDEYFLSSKCSCC 89
Query: 109 I----------------------FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSH 146
I FL PT AL +QQ + I + + C K K
Sbjct: 90 ISDQKKPPTNGPPDKKKLTKKIFFLVPTTALRKQQQEAI---FKYFYKRECSKMKIKKDF 146
Query: 147 C-DWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD 205
D K + V+V PQILL L + I E I LL+FDE HHA +HPY K+M+D
Sbjct: 147 TIDSSK---SWNVIVSTPQILLNALQSQIISFEDILLLVFDEAHHAT--KDHPYVKLMRD 201
Query: 206 FY---KP----------------DIMKVPRIFGMTASPV---VGKGASAQANLPKSINSL 243
+Y KP +++P+I G+TA+P + K + + L L
Sbjct: 202 YYHNNKPIDPSLLAYNFNFLKDRQPIELPKILGLTATPASQSLYKTSLNEHTLFLRKAKL 261
Query: 244 ENLLDAKVYSVED-AEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYIS 302
E LDA + D E+++ V++P S +Y + SE + + ++
Sbjct: 262 EFSLDASIKVPYDYMEEMKKHVNNP-----------RQHSVAYSSKSELI------EPLN 304
Query: 303 ALSRKLHDHQSLR---------NTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
AL + H + + R N + + + L V + + Y + +
Sbjct: 305 AL-KTFHSYHNFRDISVDDIEKNYRELGLIGSLIIISLICELDVFESFKSFYPIFN---- 359
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLI 413
N+ IE +S + + +F + + ++ CI F+++++ +
Sbjct: 360 -LNQPIEFSSMNEINSSPFISDKVKILFDLVDTYENTNENMRCI------IFAERIVHVK 412
Query: 414 GILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAM 473
I+ FR+ + KF+ C L+G + MSR A
Sbjct: 413 AIVKMFRMYR------------------------KFIP-LNCKELIGSSV----MSRQAQ 443
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
+++++F S LLVATK GEEGL+I C LV++FD+ T IQS GRAR S Y
Sbjct: 444 ATVVKEF-SHTTRLLVATKAGEEGLNISKCSLVVQFDICNTTREHIQSMGRARHELSRYV 502
Query: 534 FLVDSGNQRELDLIKNFSKEE 554
L D + ++ ++ N E
Sbjct: 503 VLYDKDDYSQIIMLTNMGNNE 523
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 181/448 (40%), Gaps = 87/448 (19%)
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQE-RFSLERLEILGDAF 1049
++M +E LVA +LK+ + FP ++ L A+T Q + ER E GD
Sbjct: 827 TLMSLVEQTLVAHDLKNQM---FPSCGYINLSELRNAITHRTSQNLDTNYERYEFFGDTI 883
Query: 1050 LKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFAL 1109
LKYAV + L + ++ V+NSNL KLA + ++ + F Q++
Sbjct: 884 LKYAVVLDIVLRFPFENMKFYNEEKTAKVSNSNLRKLAQKLSIMDF-----FIETQYYHH 938
Query: 1110 GRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDD 1169
E E ++ KG KK AD++E+L+G
Sbjct: 939 NVAGIAFSKSEQEASV-------------------KG-----KKVRADIIESLIGLVGKH 974
Query: 1170 S---GFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL-------SASLDMATLEILL 1219
S G K A LK + Q F A + I S+ ++ + LE ++
Sbjct: 975 SIEEGVKLARD-LKLVKKQ-NFIADKF--ILNSNPEYVKRIIENTIPDIEKNAKELERII 1030
Query: 1220 GHQFLHRGLLLQAFVHPSFN-RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTD 1278
G++F + +HPS + Y+ LEF+GDAVLD ++ ++ + L ++
Sbjct: 1031 GYKFKNILYAYYTLIHPSVDIGFNVNYETLEFVGDAVLDLYVSRTMFHNF-YLDQSEMHT 1089
Query: 1279 LRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKV 1338
RS V N A +A D +D ++ ++K K
Sbjct: 1090 FRSNFVRNTALEKIAKDFR-------------------IDQLLFVKKDLKLK-----AKS 1125
Query: 1339 LGDLVESSLGAILLDSGFNLNTVWKIM-LSFLDPILKFSNLQLNPIRELLELCNSYDLDL 1397
+ D++E+ +GA+ LDS + + + +M LS P L R+ LE +Y+ +
Sbjct: 1126 ISDVMEALIGAVALDSNLDWDKITDLMELSIFSPKL----------RDWLEGIETYENEK 1175
Query: 1398 QFPSLKKGGKFLAEAKV---TGKDKDVF 1422
S K+ + KV K+KD+F
Sbjct: 1176 LLKSPKQELNKVINIKVRLKKYKNKDMF 1203
>gi|406356425|gb|AFS34609.1| retinoic acid-inducible protein I [Ictalurus punctatus]
Length = 937
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 265/595 (44%), Gaps = 70/595 (11%)
Query: 25 SAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEE-NIIVYLGTGC 83
++V E+C V G G +SV + T+K RKYQ EL A N I+ TGC
Sbjct: 227 TSVPEQC---VEGTE-GGVASVCERHTEKK----LRKYQKELATAAYNGLNTIICAPTGC 278
Query: 84 GKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIG----FKVRTFCGG 139
GKT +AV + HL + PQK+ +F+A V + +QQ K+ +E +V+ CG
Sbjct: 279 GKTIVAVDICEH--HLKKYPQKAKVVFMATKVEVYEQQYKLFKEHFSKDPDIRVKGVCGD 336
Query: 140 SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK-MELIALLIFDECHHAQVKSNHP 198
S + +VL+M PQIL+ L ++ + LL+ DECH+ K HP
Sbjct: 337 M----SDVSLPTLVSNNDVLLMTPQILVNALQRGDVESLNTFTLLLLDECHNTTGK--HP 390
Query: 199 YAKIMKDF----YKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENL---LDAKV 251
Y IM + + +P++ G TAS VG G+ N+P++ N++ L LDA+V
Sbjct: 391 YNNIMSLYIDTKHTTHTHSLPQVVGFTAS--VGIGSF--KNVPEAENNICQLCANLDARV 446
Query: 252 YS--VEDAEDLESFVSSPVVRVYQYGPVINDTS-----SSYVTCSEQLA-EIKREQYISA 303
+ E+ ++L SFV +P ++ P ++ S + EQLA + + +S
Sbjct: 447 ITTVTENIDELRSFVHTPEKDFFEVRPRTSEDPFISIIKSIMNNIEQLALSVYKIDTVSQ 506
Query: 304 LSRKLHDHQSLRNTTKQLNRLHDSMKFC--LENLGVCGAL--HASYILLSGDETMRNELI 359
+ + + Q + + ++F E VC AL + ++ D + NE
Sbjct: 507 VQKGDYGSQMYEQWIVDVQKRCRLLQFTDPEEERRVCRALYTYTEHLRKYNDALIINE-- 564
Query: 360 EAEGNTIDDSLCRFASQASEVFAAICRRDGI----ASDLSCIEVLKEPFFSKKLLRLIGI 415
+A D + F + S + I A ++V E + KL L I
Sbjct: 565 DARTKDALDFMDSFITDISNASSDPTEHHLIDLYHAQRERLLQVAAEEKQNPKLEELQFI 624
Query: 416 LS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS------M 468
L + + ++FV A AL ++ + L + L+G G KS M
Sbjct: 625 LDEEYGNNVQTRTVLFVRTRALADALKKWIEETESLKFLKPGVLIG--RGRKSQLTGSGM 682
Query: 469 SRNAMKSILEKFR-SGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
+ K +L+ F+ S E +L+AT V +EG+DI C LV+ ++ V + +Q RGR R
Sbjct: 683 TLTGQKGVLDSFKSSNESKILIATSVADEGIDIPQCNLVLMYEYVGNVVTMVQVRGRGR- 741
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-YKVD 581
Q FL+ S +R KE+ M RE + + + S +R+ KVD
Sbjct: 742 AQGSRCFLISSRQER-------IDKEKLNMEREKLVQAAVKDLQTSPDRLCAKVD 789
>gi|167046028|gb|ABZ10545.1| dicer-like protein D [Trichoplax adhaerens]
Length = 351
Score = 127 bits (318), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 170/366 (46%), Gaps = 49/366 (13%)
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
F+ ERLEILGD++LK+ F + + EG ++ R+ V+NS+L + + L +Y
Sbjct: 6 FNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQ 65
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
+ PF Q+ G C R + + + DG D + + + K I+
Sbjct: 66 FNTPFKLKQWLPPGFTCIRNNANLVANNMLT--DGSKQRDSESFKQV------MSVKNIS 117
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVE----FEASQVTNICI-SSKSFLPLSASLD 1211
D VE LVG + SG A L WIG+ ++ E + N I ++ + LS+ +
Sbjct: 118 DTVEGLVGVYSLASGPVDAARLLPWIGLDIDPNVLIEKDKSVNFEIPTTDEDIQLSSCIL 177
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T +QF + L AF H S YQRLE+LGDA+L+YL+ ++Y P
Sbjct: 178 RNT-----DYQFNNFYWLRIAFTHSSV--ASENYQRLEYLGDAILEYLLIEFVYCRKPYF 230
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFY---------KFLIFDS--NVLSETINNYVD-- 1318
PG+++ +S++ NQ F+ +A+ FY K I DS N ++N+ D
Sbjct: 231 GPGKISHFKSVMTRNQTFSLIAIAFQFYTHIRCHSKLKLDIMDSIQNFKEILLDNHQDDH 290
Query: 1319 -----------YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
Y + S+ + + PKV D+ E+ + AI LD G L TVWK++
Sbjct: 291 QPDIGHFANLAYQLYTSNRYQ-----KLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYK 345
Query: 1368 FLDPIL 1373
+ IL
Sbjct: 346 MVQRIL 351
>gi|297737474|emb|CBI26675.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 171/388 (44%), Gaps = 60/388 (15%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
+E ++ ++F ++ LL +A H S+ YQRLEF+GDA L +++Y++ YP L P
Sbjct: 7 AVERIINYKFRNKKLLEEALTHSSYTD-SASYQRLEFIGDAALGCALSNYVFLAYPSLDP 65
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
GQL+ +R+ ++ + A VAV Y+++ ++ L + + + + +
Sbjct: 66 GQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEEGDSVLYGGSV 125
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELLELCN 1391
+ PK L D+VES AI +D F+L +W I L+PI+ LQ P+ L ELC
Sbjct: 126 KAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPVTLLYELCQ 185
Query: 1392 SYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
+ +KG K +A V GK FI++ +++ ++ +KL AA
Sbjct: 186 KDGKHVDIKHWRKGSKNIASVYVGGK----FIASGSSD-----------EKEIAKLNAAK 230
Query: 1452 YVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPS 1511
E++ K S K + + + IN SC+I
Sbjct: 231 --------EALQKLSSKLKDTEMTQNNLEIN--------------------GSCEID--- 259
Query: 1512 LTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIEC 1571
A+ +L+E C+ W P++ KE G +H K F V IE + ++
Sbjct: 260 ---------GAKQKLHEFCSKKKWPKPSYRIEKEVGPAHEK--GFLCSVHIETVDGVLVM 308
Query: 1572 IGEPQAKKKGAAEHAAEGMLWCLEREGY 1599
G+ + + K A AA M+ L Y
Sbjct: 309 QGDTKPRVKDAENSAASFMICTLYESRY 336
Score = 48.1 bits (113), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L +ALT + S +RLE +GDA L A+ ++FL + ++D G+L+ R+ ++
Sbjct: 20 KLLEEALTHSSYTDSASYQRLEFIGDAALGCALSNYVFLAYPSLDPGQLSLIRAANISTE 79
Query: 1082 NLLKLAARNNLQVYIRDQPF---DPCQFFALG 1110
L ++A R L Y+R D + FAL
Sbjct: 80 KLARVAVRVGLYQYVRHNAAALDDKVREFALA 111
>gi|328773741|gb|EGF83778.1| hypothetical protein BATDEDRAFT_85615 [Batrachochytrium dendrobatidis
JAM81]
Length = 1746
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 225/502 (44%), Gaps = 52/502 (10%)
Query: 918 LISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE--EYFDDLP---PELCQ 972
+ SS G + HP LL+ + +++ + + ++ + ++ + D+LP P+
Sbjct: 1194 IASSQGYTVDHPNANLLKCVRIPHIKDYRRSCQATKNKHNCVDDNQNLDNLPQLVPD--A 1251
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
++ S + LPSI++ L +A E +P+ ++ L+ A TT
Sbjct: 1252 FRVSPISAKLTMVAHYLPSILYSLHTACLAAEFDQKYGL-YPK--QIPLSTLMSAFTTPA 1308
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
+ ERLE LGD LK+ V +L + + + G+L+ S V+N NL ++A +++L
Sbjct: 1309 ANSITNYERLETLGDKVLKFGVAHYLHSSYQSYEVGQLSTILSGLVSNKNLFEIAQQHSL 1368
Query: 1093 QVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK 1152
+ PF + P C ++ R A V C + K
Sbjct: 1369 TGMLNTAPFQSNSWTP-----PSFC-----------FETRIFVAPTASVDCLDNRVFCGK 1412
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF--------EASQVTNICISSKSFL 1204
K +D +EAL+GA+ + G +AA ++ + E + +++ + ISS
Sbjct: 1413 KQ-SDFIEALLGAYFLECGVEAALHLMRTFRLINEIPPHCFRHGDTNKLHDHQISSMQN- 1470
Query: 1205 PLSASLDMATLEIL---LGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLIT 1261
P+ + LD T++ + L + F + LLL A + P F + ++RLEFLGDA++D L+
Sbjct: 1471 PILSRLDQETVDHVQQKLSYNFHNPELLLIALMTP-FYFVKSKFERLEFLGDAIMDILVA 1529
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLS---ETINNYVD 1318
Y Y Y P L+ + V AF + V ++ L+ S + E I Y +
Sbjct: 1530 RYFYRHYKHADPCSLSKMIQATVCKPAFCKILVSLKLHEHLLQSSQLSQHSKEAIVLYAN 1589
Query: 1319 YMITPSSTREVKEGPRC---PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF 1375
Y+ S K+ + PKVL D+ E + AI +D+G+NL ++ ++ ++
Sbjct: 1590 YIQNSHSQHAFKQADKAIDGPKVLCDVFEVIVAAIFIDTGYNLERTRLVIFPYVHSFIQ- 1648
Query: 1376 SNLQLN-----PIRELLELCNS 1392
SN+ L PIR+L S
Sbjct: 1649 SNINLETITEPPIRQLFAFVQS 1670
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 114/263 (43%), Gaps = 40/263 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI------YELAHLIRKPQKSI------ 107
+ YQ+ + ++A+ N+I ++ + KT ++++LI L H ++ Q++
Sbjct: 7 KPYQIRVYEEAIHHNVIAFMDSNDYKTLVSIMLIDAITEKLPLVH-VQPSQQTYSTSENN 65
Query: 108 ------------------CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD- 148
I T V+++A I + VR + G SH D
Sbjct: 66 LAVSTYHIQNSETLNSRKTIVCVGTKGAVKEKANEIHQYTDLVVRGYSGEESSSISHLDY 125
Query: 149 --WEKEIDQYEVLVMIPQILLYCLYHRFIKM-ELIALLIFDECHHAQVKSNHPYAKIMKD 205
W+KE +VLVM Q+ + L +++ + + I L+IFDECHH++ H IM
Sbjct: 126 NHWQKEFSNSQVLVMPQQLFVNLLTRKYLDLSKHICLIIFDECHHSRNAQEH--QAIMNG 183
Query: 206 FYKPDIMKVPR--IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESF 263
FY ++ PR IF +++ P+ + + +L K++ L + + V D
Sbjct: 184 FYCHIPVRSPRPKIFVVSSIPIHSISMNLK-DLEKNLKDLMVMFSCQTVVVPDRRQDNIQ 242
Query: 264 VSSPVVRVYQYGPVINDTSSSYV 286
+ V V +Y ND +S +
Sbjct: 243 PRNTDVTVLEYDSTTNDFNSLFT 265
Score = 45.1 bits (105), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG-RARMPQ 529
N+ ++ L++F+S ELN+LV + G+ + C LVI FD P + + +G +P
Sbjct: 510 NSTQNTLQRFKSRELNVLVVSNFGQNRCHLPKCGLVILFDWPRKQLCYERLKGYTGGVPG 569
Query: 530 SEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS-EERIYKVDSSG 584
S++ +V G+ ++ + I S +F+CS +++Y+ S
Sbjct: 570 SQFIVMVAKGH--------------SKLKKAIAKAESIASFSCSVVQKLYRFKKSS 611
>gi|327283103|ref|XP_003226281.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Anolis carolinensis]
Length = 1006
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 250/548 (45%), Gaps = 79/548 (14%)
Query: 49 QKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---Q 104
Q+ +P+ R YQ+E+ + A+E +NI++ L TG GKT +AV + + HL +K +
Sbjct: 291 QRDSPEPELCLRDYQMEVAQPALEGKNILLCLPTGSGKTRVAVYIAKD--HLDKKKDAGE 348
Query: 105 KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQ 164
+ I L V LV+Q + G S + + K + V++ Q
Sbjct: 349 EGKVIVLVNKVPLVEQHFRKEFHPYLKHSYKVIGLSGMTQLKISFPKVVKDNHVIICTAQ 408
Query: 165 ILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-------- 210
IL L + +++ + +L+I DECHH Q ++ Y IM+ + K
Sbjct: 409 ILENALQNAEQDEEEGVQLSVFSLIIIDECHHTQKEA--VYNNIMRRYLKQKMQNEKRRK 466
Query: 211 ----IMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAED--LESFV 264
++ P+I G+TASP VG GA + + I + LDA + D L S V
Sbjct: 467 MGKPLVPQPQILGLTASPGVG-GAKNHSKAEEHILKICANLDAYGITTVRTNDLGLNSQV 525
Query: 265 SSPVVRVYQYGPVINDTSSSYVTCSEQLAEI--KREQYI-----SALSRKLHDH---QSL 314
P ++ + +D + E+L I K + Y + + ++ Q
Sbjct: 526 KEPRKKI----DIADDKTKD--PFREELVNIMMKIQGYCQFNPNAEFGSQTYEQWVVQEE 579
Query: 315 RNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFA 374
+ K+ NR H C E+L + +L+ ++T+R +I+A N + +
Sbjct: 580 KKAAKEENRKH---HICAEHL----KKYNDALLI--NDTIR--MIDAY-NHLKNFYKEEK 627
Query: 375 SQASEVFAAICRRDGIASDLSCIEV-LKEPFFSKK-LLRLIGILSTFRLQQ--------- 423
S+ V + +AS ++ L + F+ KK +L+ + ++ + ++
Sbjct: 628 SKKMAVNEEEDEEEAVASKPDETDIFLMDLFYGKKDMLQKLATVAKYENEKLKLLRETLM 687
Query: 424 -------HMKCIVFVNRIVTARAL-SYILQNLKF-LASWRCHFLVGV--NAGLKSMSRNA 472
+ I+F +A AL +I +N KF A + H+L+G N+ K M++N
Sbjct: 688 TEFTKKPEARGIIFTKTRQSAFALYEWIKENPKFEEAGVKAHYLIGAGHNSEFKPMTQNE 747
Query: 473 MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
K ++EKFR G++NLL+AT V EEGLDI C +VIR+ L + +Q+RGRAR +S Y
Sbjct: 748 QKDVIEKFRIGKINLLIATTVAEEGLDIPECNIVIRYGLVTNEIAMVQARGRARADESTY 807
Query: 533 AFLVDSGN 540
+ G+
Sbjct: 808 VLVASGGS 815
>gi|406356429|gb|AFS34611.1| melanoma differentiation-associated protein 5 [Ictalurus punctatus]
Length = 1005
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 145/545 (26%), Positives = 246/545 (45%), Gaps = 71/545 (13%)
Query: 43 ESSVGAQKTDKDPKQIA-RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E + G+ + K+I R YQ ++ + A+E +NII+ L TG GKT +AV + + HL
Sbjct: 293 EQTAGSLDQSVNEKEIVLRDYQKDVAQPALEGKNIIICLPTGSGKTRVAVYITKQ--HLE 350
Query: 101 RKP---QKSICIFLAPTVALVQQQAKVIEESIG------FKVRTFCGGSKRLKSHCDWEK 151
R+ Q + + L V LV+Q K G + V G S+ LK + +
Sbjct: 351 RRKLRGQPAKVVVLVNKVPLVEQHYKA---EFGKFLKHQYSVERVSGDSQ-LK--ISFPQ 404
Query: 152 EIDQYEVLVMIPQILLYCLY------HRFIKMELIALLIFDECHHAQ------------V 193
I++ ++++ QIL L I + L++ DECHH Q +
Sbjct: 405 VIEKNDIIICTAQILENSLDKAKQGDEDGITLSQFTLMVIDECHHTQKGGVYNHIMIRYL 464
Query: 194 KSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA---- 249
K H A++ K+ P + +P+I G+TASP VG GA Q + I + LDA
Sbjct: 465 KQKHKNARLQKEQNDP--VPLPQILGLTASPGVG-GAKTQQKAEEHILRICANLDAYTIK 521
Query: 250 -KVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE-----QLAEIKREQYISA 303
K E + S+ + +G VI + T ++ Q EQ++
Sbjct: 522 TKTLGEEPKGPYKRIASAQERKEDPFGDVIKGIMNEIHTHAKLNPLCQPGTQNYEQWVVQ 581
Query: 304 LSRKL--HDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA 361
+ D+Q++R + L + ++++ + + +C A S++ + NE I+
Sbjct: 582 KEQNAAKEDNQTVRVCAEHLRQYNEAL-YQSNTIRMCDAF--SFL-----DKYYNEEIKK 633
Query: 362 EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIG--ILSTF 419
+ D+++ + +F A E++K P + L + IL +
Sbjct: 634 KFTPDDEAIIQITDTERFLFKLFN-----AKKERLQELMKNPEYENNSLAQLRTLILQEY 688
Query: 420 RLQQHMKCIVFVNRIVTARALSYILQ-NLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKS 475
+ + I+F ++A ALS +Q N KF R L+G + +K M+ +
Sbjct: 689 TTRTEARGIIFTKTRLSAIALSQWIQGNSKFEDVGVRASHLIGGGDQSVVKPMTAAEQRE 748
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L+KFR G +NLL+AT V EEGLDI+ C +VIR+ L + IQ+RGR R S Y +
Sbjct: 749 VLKKFRDGVINLLIATTVAEEGLDIKECNIVIRYCLVTNEIAMIQARGRGRAEDSSYTVV 808
Query: 536 VDSGN 540
++G+
Sbjct: 809 EEAGS 813
>gi|195624966|gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
Length = 329
Score = 126 bits (317), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 112/199 (56%), Gaps = 8/199 (4%)
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYLIT 1261
P+SA D+ +E LLG+ F+ + L+ A H SF NR G Y+RLE+LGD VL L++
Sbjct: 42 PMSAK-DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMS 100
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++ Y L+PG LT LR+ V+ + A VAV + Y+FL + L + I +++ M
Sbjct: 101 REVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLYRFLRHKAPKLQDQICFFIEEMR 160
Query: 1322 T-PSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
P + + + PKVL D+VES +GAI LDS F+ VW++ + DP++ L
Sbjct: 161 KYPVHSNGLLD---PPKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADPLIGLETLGK 217
Query: 1381 NPIRELLELCNSYDLDLQF 1399
+P+ EL E C ++F
Sbjct: 218 HPVSELFEFCQKTHRGVKF 236
>gi|225460893|ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
Length = 364
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 175/400 (43%), Gaps = 60/400 (15%)
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLIT 1261
S+ S + +E ++ ++F ++ LL +A H S+ YQRLEF+GDA L ++
Sbjct: 22 SYPSKSMEASVEAVERIINYKFRNKKLLEEALTHSSYTD-SASYQRLEFIGDAALGCALS 80
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+Y++ YP L PGQL+ +R+ ++ + A VAV Y+++ ++ L + + + +
Sbjct: 81 NYVFLAYPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQ 140
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL- 1380
+ + PK L D+VES AI +D F+L +W I L+PI+ LQ
Sbjct: 141 EEGDSVLYGGSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQ 200
Query: 1381 -NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIA 1439
P+ L ELC + +KG K +A V GK FI++ +++
Sbjct: 201 PQPVTLLYELCQKDGKHVDIKHWRKGSKNIASVYVGGK----FIASGSSD---------- 246
Query: 1440 SQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEP 1499
++ +KL AA E++ K S K + + + IN
Sbjct: 247 -EKEIAKLNAAK--------EALQKLSSKLKDTEMTQNNLEIN----------------- 280
Query: 1500 QGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVI 1559
SC+I A+ +L+E C+ W P++ KE G +H K F
Sbjct: 281 ---GSCEID------------GAKQKLHEFCSKKKWPKPSYRIEKEVGPAHEK--GFLCS 323
Query: 1560 VEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGY 1599
V IE + ++ G+ + + K A AA M+ L Y
Sbjct: 324 VHIETVDGVLVMQGDTKPRVKDAENSAASFMICTLYESRY 363
Score = 48.1 bits (113), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L +ALT + S +RLE +GDA L A+ ++FL + ++D G+L+ R+ ++
Sbjct: 47 KLLEEALTHSSYTDSASYQRLEFIGDAALGCALSNYVFLAYPSLDPGQLSLIRAANISTE 106
Query: 1082 NLLKLAARNNLQVYIR 1097
L ++A R L Y+R
Sbjct: 107 KLARVAVRVGLYQYVR 122
>gi|322798617|gb|EFZ20221.1| hypothetical protein SINV_06556 [Solenopsis invicta]
Length = 386
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 120/220 (54%), Gaps = 18/220 (8%)
Query: 1228 LLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
++ QAF HPS+ N L CYQRLEFLGDA+LD+LIT Y+Y L PG+LTDLRS LVN
Sbjct: 147 VIFQAFTHPSYTANGLTECYQRLEFLGDAILDFLITCYIYEKCGNLSPGELTDLRSALVN 206
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYV------DYMITPSSTREVKEGPRC---- 1335
N FA +AV + L+ + L E I+ +V DY++ + E C
Sbjct: 207 NITFACLAVRYGLHIALLAYAPKLDEIIDRFVKFQEDRDYVVNDELLYVLIEEEECNLVE 266
Query: 1336 ----PKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILKFS-NLQLNPIRELLEL 1389
PKVLGDL ES +GAI LDSG +L +W+I+ + + I +FS ++ P+R + E
Sbjct: 267 YVDVPKVLGDLFESLIGAIYLDSGKDLVKIWEIIYTLMHKEIDEFSRSIPKQPVRVIYEH 326
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATN 1429
+ L+ +K G+ + KVT K+ F N
Sbjct: 327 TDLRPKFLEATLIKGTGRVMIPLKVTIAGKEKFFHGFGIN 366
>gi|288965284|pdb|2KOU|A Chain A, Dicer Like Protein
Length = 102
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTICHIILPANAPIHQIVGTPQ 644
IS G +S++++YCS+LPHDEFF PKP+F + D+ GGTIC I LPANAPI +I +
Sbjct: 1 ISGGSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLL 60
Query: 645 SSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDE 683
S EAAKKDACLKA+ +LH LG LND+LLP + EDE
Sbjct: 61 PSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDE 99
>gi|302819689|ref|XP_002991514.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
gi|300140716|gb|EFJ07436.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
Length = 569
Score = 126 bits (316), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 155/321 (48%), Gaps = 37/321 (11%)
Query: 778 SGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKI 837
+ + A+ +QE+ L +R S G + S +LLLPV +S+DW
Sbjct: 72 ANVKAAKAYQELLLNGAFNRLARCS-----GSPQEILWNKSQAFLLLPVHDDNDSIDWTS 126
Query: 838 IR------RCL------SSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYAT 885
+ R L SSP+ G G + L NG+ S +++ +V
Sbjct: 127 VHATAGVYRTLCSNFSPSSPIDGDGVGEKTHADM-----LCTANGYVHSSALQDMVVATV 181
Query: 886 HKKWFYLVTNIV--FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLR 943
H + VT ++ F P + +++D+ Y L+ P QPLL+AKP
Sbjct: 182 HNGRLFCVTGVLENFTAASLLPKR---GFTYIDYYKDKYQRTLRLPDQPLLKAKPTHAFH 238
Query: 944 NLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAI 1003
NLL R ED S + EE F +LPPELC + + SL +PS +H+ + + AI
Sbjct: 239 NLL-IRPKEDHGSRQ-EESFVELPPELCL--CLEIKSGLIRSLYFVPSFLHQFTSTVCAI 294
Query: 1004 ELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHD 1063
+L+ L P A +L+A+T++KC E FS E LE+LGD+FLKY V + LFL++D
Sbjct: 295 QLRSPLWPWIP------AAKILEAITSKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYD 348
Query: 1064 TVDEGELTRRRSNAVNNSNLL 1084
EG+L+ RR+ +++L
Sbjct: 349 KKHEGQLSARRNTYATKNSIL 369
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 42/195 (21%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+ LE LGD+ L Y++T L+ VY K GQL+ R+ + + ++ +
Sbjct: 324 YESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLPLI-- 381
Query: 1305 DSNVLSETINNYVDY----------MITPSS----------------------TREVKEG 1332
N E++ + + Y IT +S + VKE
Sbjct: 382 HQNASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVELDCEIRKFVQNVKEK 441
Query: 1333 P--------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIR 1384
P PKVLGDL+ES GAI +D+ F+L +W+++L L P++ L+ +P+R
Sbjct: 442 PDASCFEDLSAPKVLGDLLESITGAIFVDTNFDLEKLWRVVLPLLSPLVTPGTLRFHPVR 501
Query: 1385 ELLELCNSYDLDLQF 1399
L+ELC + + F
Sbjct: 502 ILMELCARQGMKVSF 516
>gi|167046030|gb|ABZ10546.1| dicer-like protein D [Placozoa sp. DMJ-2008]
Length = 351
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 169/366 (46%), Gaps = 49/366 (13%)
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
F+ ERLEILGD++LK+ F + + EG ++ R+ V+NS+L + + L +Y
Sbjct: 6 FNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQ 65
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
+ PF Q+ G C R + + + DG D + + + K I+
Sbjct: 66 FNTPFKLKQWLPPGFTCIRNNANLVANNMLT--DGSKQRDSESFKQV------MSVKNIS 117
Query: 1157 DVVEALVGAFIDDSGFKAATAFLKWIGIQVE----FEASQVTNICI-SSKSFLPLSASLD 1211
D VE LVG + SG A L WIG+ ++ E + N I ++ + LS+ +
Sbjct: 118 DTVEGLVGVYSLASGPVDAARLLPWIGLDIDPNVLIEKDKSVNFEIPTTDEDIQLSSCIL 177
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T +QF + L AF H S YQRLE+LGDA L+YL+ ++Y P
Sbjct: 178 RNT-----DYQFNNFYWLRIAFTHSSV--ASENYQRLEYLGDATLEYLLIEFVYCRKPYF 230
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFY---------KFLIFDS--NVLSETINNYVD-- 1318
PG+++ +S++ NQ F+ +A+ FY K I DS N ++N+ D
Sbjct: 231 GPGKISHFKSVMTRNQTFSLIAIAFQFYTHIRCHSKLKLDIMDSIQNFKEILLDNHQDDH 290
Query: 1319 -----------YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
Y + S+ + + PKV D+ E+ + AI LD G L TVWK++
Sbjct: 291 QPDIGHFANLAYQLYTSNRYQ-----KLPKVCADVFEAFIAAIYLDCGKKLRTVWKVVYK 345
Query: 1368 FLDPIL 1373
+ IL
Sbjct: 346 MVQRIL 351
>gi|325185579|emb|CCA20062.1| Dicerlike 1 (DCL1) putative [Albugo laibachii Nc14]
Length = 1609
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 170/386 (44%), Gaps = 79/386 (20%)
Query: 1040 ERLEILGDAFLKYAVGRHLF-LLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ER E+LGD FLK +++ + D DEG L+ R + + N L + + L YI
Sbjct: 1214 ERCEVLGDTFLKLETSWYMYQMRRDIPDEGTLSMLRRDIIRNDRLCQFSLLKELHHYI-- 1271
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ A + P C K + G+ P +NA K IADV
Sbjct: 1272 ------VYPAELEQHPFSCWKPSCM-------GKTPQSINAP-----------SKWIADV 1307
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSFLPLSAS------ 1209
+EA+ GA+I G K A FL W+GI V FE S+ K+ P +
Sbjct: 1308 LEAICGAYIIGHGEKGARYFLNWVGIHVLDDSFEFSKRFYPDCYPKTLFPEAFKHVGKWK 1367
Query: 1210 ----------LDMATLEILLGHQFLHRGLLLQAFVHPSFNRL------------GGCYQR 1247
M LE L ++F ++ LLL+A HPS RL G Y+R
Sbjct: 1368 FSILHHETLVKKMRLLEQRLCYRFRNKLLLLEAITHPSVRRLEIVMDNEKRVSWQGNYER 1427
Query: 1248 LEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA-----VDQSF-YKF 1301
LE+LGDA+++YL SY + + PG L++ ++ V+N A A VD++
Sbjct: 1428 LEYLGDALIEYLTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAIACFGVDEAICLGH 1487
Query: 1302 LIFDSNVLS--ETINN--YVDY---MITPSSTREVKEGPRC-------PKVLGDLVESSL 1347
+ FD +++ +TI VDY I P +R C PK+L D++E+ +
Sbjct: 1488 VQFDREIMNKIKTIPRKYAVDYNVDTIQPGHSRNSTTKSNCTTNLLALPKILADVMEALV 1547
Query: 1348 GAILLDSGFNLNTVWKIMLS-FLDPI 1372
A+ LDSG +L + + L LD I
Sbjct: 1548 AAVFLDSGKDLGIIRDVFLGRLLDTI 1573
>gi|160285502|pdb|2EB1|A Chain A, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285503|pdb|2EB1|B Chain B, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285504|pdb|2EB1|C Chain C, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
Length = 200
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
E + ++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 10 NFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 69
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
PG LTDLRS LVNN FA++AV ++K+ S L I+++V + + + + +
Sbjct: 70 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDS 129
Query: 1332 GPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS 1376
R PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS
Sbjct: 130 ELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFS 188
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 44 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 101
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 102 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 149
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 150 MGDIFESLAGAIYMDSGMSLETVW 173
>gi|340386816|ref|XP_003391904.1| PREDICTED: endoribonuclease Dicer-like, partial [Amphimedon
queenslandica]
Length = 380
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 167/372 (44%), Gaps = 87/372 (23%)
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT---NICISSKSFL 1204
H + K++AD VEAL+GA G + +KW GI++ +S + + ++ S L
Sbjct: 19 HKVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTHSLL 78
Query: 1205 -------------------------PLSASLD--------MATLEILLGHQFLHRGLLLQ 1231
PL ++ +++++ + + F + LL++
Sbjct: 79 LAESDSIFSSHFRSPPAPKLASKLAPLDKAISTRNRILPQVSSIQGKIEYSFKNELLLIE 138
Query: 1232 AFVHPSFNR--LGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
A H S++R + GCYQRLEFLGDA+LDYL+T ++Y +PG++T+LRS LV N F
Sbjct: 139 AMTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCNSRF 198
Query: 1290 ANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR--------------- 1334
A +A+ + ++ L S L + Y + RE ++ R
Sbjct: 199 AELAISLNLHRSLCHGSPNLFNDMKKYAQSL----KQREKEDRERKLEEMSINDDDSAQV 254
Query: 1335 ----------------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
PK L D E+ GA+ +DSG NL TVW+ FL+P+
Sbjct: 255 IVESMEDGDIDDDEDEDDDIIEPPKSLSDCFEALAGAVFIDSGMNLQTVWETFSPFLEPL 314
Query: 1373 L-KFSN-LQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNL 1430
KF N L PI EL +L DL+++ L +G ++ + KDK+ I AT
Sbjct: 315 FEKFKNDPPLTPICELHKLI-PKDLEVKKKVLSEGK---SQCIIEIKDKN--ICEVATAR 368
Query: 1431 SRKEAIRIASQQ 1442
S K A A+ +
Sbjct: 369 SYKNAKNFAASR 380
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 15/152 (9%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y V H++ + + G +T RS V NS +LA NL +
Sbjct: 155 QRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCNSRFAELAISLNLHRSLCHG 214
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV-------------RCSKG 1146
P F + + + +E E + DD +A+V
Sbjct: 215 --SPNLFNDMKKYAQSLKQREKEDRERKLEEMSINDDDSAQVIVESMEDGDIDDDEDEDD 272
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
K+++D EAL GA DSG T +
Sbjct: 273 DIIEPPKSLSDCFEALAGAVFIDSGMNLQTVW 304
>gi|359485630|ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
gi|297739192|emb|CBI28843.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 13/232 (5%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
+ +E +LG+ F ++ LL +A+ H S + Y+RLEF+GD+VL LIT + +YP L
Sbjct: 30 LEGVEQILGYSFTNKRLLEEAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQFFLYPDL 89
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV----DYMITPSSTR 1327
+PG+LT LRS V+ + A VA+ ++FL + + I + +Y + +
Sbjct: 90 QPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEYPLHSNGQI 149
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELL 1387
EV PKVL D+VES++GA+ +D +++TVWK+ L+P++ L+++P+ EL
Sbjct: 150 EV------PKVLADVVESTIGAVFVDCNCSVDTVWKVFKGLLEPMIVPETLKVHPVTELN 203
Query: 1388 ELCNSYDLDLQFP-SLKKGG--KFLAEAKVTGKDKDVFISACATNLSRKEAI 1436
E C L L+F S ++ G F E G+ + A N + K A+
Sbjct: 204 ERCQKRGLKLEFKDSWQRRGDIDFYIEDYFAGRGEYPLRKDIALNRAAKAAL 255
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 1010 SASFP--EGAE-------VSAEMLLKALTTEKCQE-RFSLERLEILGDAFLKYAVGRHLF 1059
+ SFP EG E + +L +A T CQ+ +FS ERLE +GD+ L + + F
Sbjct: 24 AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQF 83
Query: 1060 LLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR-DQPFDPCQFFALGRRCPRICS 1118
L+ + G LTR RS V+ L ++A ++ L ++R +P Q +
Sbjct: 84 FLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAI----- 138
Query: 1119 KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
E +HS P K +ADVVE+ +GA D T +
Sbjct: 139 --KEYPLHSNGQIEVP------------------KVLADVVESTIGAVFVDCNCSVDTVW 178
Query: 1179 LKWIGI 1184
+ G+
Sbjct: 179 KVFKGL 184
>gi|357464753|ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355491706|gb|AES72909.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 344
Score = 125 bits (314), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 174/387 (44%), Gaps = 61/387 (15%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
+A +E ++G+ F ++ LL +A H S+ Y+RLEF+GDAVL + I+++L+ VY +
Sbjct: 9 VAAVEKIIGYTFRNKNLLEEALTHSSYPE-SVSYERLEFIGDAVLGHAISNHLFLVYTNV 67
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
QL+ LRS V+ + A AV ++++ ++ L+E I + + V
Sbjct: 68 DQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAIVLY 127
Query: 1332 GP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELL 1387
G + PKVL D+VES A+ +D F+L +W ++ L+PI+ ++L+ P+ L
Sbjct: 128 GGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVTMLY 187
Query: 1388 ELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKL 1447
E+C+ + + G K A V G ++F A+ + Q+ +KL
Sbjct: 188 EICHKNGKKVDIRHSRNGDKSTASVYVDG---ELF------------AVASSDQKDIAKL 232
Query: 1448 KAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDI 1507
AA KS+ + R++ T + D FE I EP
Sbjct: 233 DAA-------------KSAVQKLERVLPITTTTPDNCKGLDGTFE---IEEP-------- 268
Query: 1508 GSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEK 1567
+ +LY LC W P + ++EG K+F V++ P+
Sbjct: 269 ---------------KQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVTS--VQVATPDG 311
Query: 1568 IIECIGEPQAKKKGAAEHAAEGMLWCL 1594
++ +GE +++ K + AA M+ L
Sbjct: 312 TLKMLGEEKSRVKDSQNSAASLMIRAL 338
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +ALT E S ERLE +GDA L +A+ HLFL++ VD+ +L+ RS V+
Sbjct: 25 LLEEALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEK 84
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDG--RAPDDLNAE 1140
L + A N L YIR + + R +E R I Y G +AP
Sbjct: 85 LARAAVSNCLHRYIRLKTHSLAEHI---REFAAAVEQEKGRAI-VLYGGAVKAP------ 134
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
K +ADVVE++ A D F
Sbjct: 135 ------------KVLADVVESVAAAVYVDLDF 154
>gi|291383111|ref|XP_002708086.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I
[Oryctolagus cuniculus]
Length = 926
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 163/596 (27%), Positives = 259/596 (43%), Gaps = 78/596 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL AM+ +N I+ TGCGKT +++L+ + QK +F A V +
Sbjct: 245 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKTFPQGQKGKVVFFANHVPVY 304
Query: 119 QQQAKVIEE---SIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E +G+ V G + + ++ ++ +++V+ PQIL+ L I
Sbjct: 305 EQQKSVFSEYFERLGYSVAGIAGATVE---NVPVQQIVENNDIIVLTPQILVNNLKDGTI 361
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM------KVPRIFGMTASPVVGK 228
+ + L+IFDECH+ HPY KIM FY D +P++ GMTAS VG
Sbjct: 362 PSLSVFTLMIFDECHNTC--KQHPYNKIM--FYYLDQKLGGSSDPLPQVVGMTASVGVGD 417
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+ + + I L LDA V + E+ E+L+ V +P + R V + T++
Sbjct: 418 AKNTDEAV-EYICKLCASLDASVIATVKENLEELQEIVYTPQKISR-----RVESRTTNG 471
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + E + +L + ++N T K + + K C
Sbjct: 472 FKRIISQLMR-ETESLAKDVFEELENLSQIQNREFGTQKYEQWIVEVHKACRTFQLPDKD 530
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA--------I 384
E +C AL Y+ S + LI +E + D+L + +V AA +
Sbjct: 531 EESRICKAL---YLYTSHLRKYNDALIISEHAQMKDALNYLNNFFKDVRAAGFDETEQDL 587
Query: 385 CRR-DGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSY 442
RR +G +L + + + KL L IL + + K I+FV A+
Sbjct: 588 TRRFEGKVQELETVS-MDPSNENPKLKDLYLILQEEYHVNPETKTILFVKTRALVDAIKK 646
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRS-GELNLLVATKVGEEGLD 499
++ L+ + L G ++ M+ A K +L+ FRS G+ N+L+AT V +EG+D
Sbjct: 647 WIEENSKLSFLKPGILTGRGKTSQTTGMTLPAQKCVLDAFRSNGDHNILIATSVADEGID 706
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR 559
I C LVI ++ V IQ+RGR R S+ L + + E + I + +E MN
Sbjct: 707 IAQCNLVILYEYVGNVIKMIQTRGRGRAKGSKCLLLTSNADVIEKENINMY--KEKMMNE 764
Query: 560 EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKF 615
I+ TC E + K CI G K+ D N KPK
Sbjct: 765 SILRLQ-----TCDEAKFKK---KLLCIQTG----------EKIIRDNQQNFKPKL 802
>gi|440690962|pdb|4GL2|A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By
Mda5
gi|440690963|pdb|4GL2|B Chain B, Structural Basis For Dsrna Duplex Backbone Recognition By
Mda5
Length = 699
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 250/540 (46%), Gaps = 87/540 (16%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTV 115
R YQ+E+ + A+E +NII+ L TGCGKT +AV + + HL +K + S I L V
Sbjct: 9 RPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKD--HLDKKKKASEPGKVIVLVNKV 66
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH--- 172
LV+Q + + K G S + + + + ++++ QIL L +
Sbjct: 67 LLVEQLFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNLEN 126
Query: 173 ---RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-------------KPDIMKVPR 216
+++ +L+I DECHH ++ Y IM+ + KP ++ +P+
Sbjct: 127 GEDAGVQLSDFSLIIIDECHHTNKEA--VYNNIMRHYLMQKLKNNRLKKENKP-VIPLPQ 183
Query: 217 IFGMTASPVVG---KGASAQANLPK--------SINSLENLLD---------AKVYSVED 256
I G+TASP VG K A A+ ++ K +I +++ LD K +++ D
Sbjct: 184 ILGLTASPGVGGATKQAKAEEHILKLCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIAD 243
Query: 257 AEDLESF------VSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHD 310
A + F + + + Q P+ + + Y + Q+ E K + + R +
Sbjct: 244 ATREDPFKEKLLEIMTRIQTYCQMSPMSDFGTQPYEQWAIQM-EKKAAKEGNRKERVCAE 302
Query: 311 HQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSL 370
H N Q+N D+++ +Y L ET NE + + I+D L
Sbjct: 303 HLRKYNEALQIN---DTIRMI-----------DAYTHL---ETFYNEEKDKKFAVIEDDL 345
Query: 371 ---CRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF-SKKLLRLIG-ILSTF-RLQQH 424
+ + + + L+ + P + ++KL +L I+ + R ++
Sbjct: 346 KKPLKLDETDRFLMTLFFENNKMLKRLA-----ENPEYENEKLTKLRNTIMEQYTRTEES 400
Query: 425 MKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSILEKF 480
+ I+F +A ALS +I +N KF + H L+G ++ K M++N K ++ KF
Sbjct: 401 ARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKF 460
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
R+G++NLL+AT V EEGLDI+ C +VIR+ L + +Q+RGRAR +S Y + SG+
Sbjct: 461 RTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGS 520
>gi|297834980|ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
gi|297331212|gb|EFH61631.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
Length = 391
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 176/412 (42%), Gaps = 86/412 (20%)
Query: 1204 LPLSASLD-MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+P++ ++ M LE +L ++F ++ LL +A H S Y+RLEF+GD+ + I++
Sbjct: 51 VPVTPEMESMEALEKILNYKFKNKSLLKEAITHTSCTDFPS-YERLEFVGDSAIGLAISN 109
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
YLY YP L+P QL+ LR+ V+ + A V ++ Y+FL ++ L E + + D +
Sbjct: 110 YLYLTYPSLEPHQLSLLRAANVSTEKLARVTLNHGLYQFLRRNAPSLDEKVKEFSD-AVG 168
Query: 1323 PSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
V G + PKVL DL ES GA+ +D F+L +W I L+PI+ +LQ
Sbjct: 169 KEDDFSVAYGGLVKAPKVLADLFESVAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQK 228
Query: 1381 --NPIRELLELCNSYDLDLQFPSLKKGG----------KFLAEAKVTGKDKDVFISACAT 1428
P+ L +LC+ + + + K G +FLA + KD I+A
Sbjct: 229 QPQPVSMLFKLCHKHKKRIDIKNWKDGNISIADIYLDDEFLASGRAENKDIARLIAA--- 285
Query: 1429 NLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADD 1488
KEA+R S+ P+ +V +D
Sbjct: 286 ----KEALRKLSEVF------------------------------------PVEMVIDED 305
Query: 1489 NVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGL 1548
+V +LK A+++L E+C W P + ++
Sbjct: 306 SVEIELK-------------------------HAKTKLNEICLKKKWPKPIYSIEEDRTS 340
Query: 1549 SHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
H K F ++I E+ + G+ Q+K K A +A M+ L + YL
Sbjct: 341 VHGKRFVCSAKIKIPT-EETLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391
Score = 42.0 bits (97), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +A+T C + S ERLE +GD+ + A+ +L+L + +++ +L+ R+ V+
Sbjct: 76 LLKEAITHTSCTDFPSYERLEFVGDSAIGLAISNYLYLTYPSLEPHQLSLLRAANVSTEK 135
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L ++ + L ++R R P + K E + D + E
Sbjct: 136 LARVTLNHGLYQFLR-------------RNAPSLDEKVKEFS----------DAVGKEDD 172
Query: 1143 CSKGHHWLHK--KTIADVVEALVGAFIDDSGF 1172
S + L K K +AD+ E++ GA D F
Sbjct: 173 FSVAYGGLVKAPKVLADLFESVAGAVYVDVNF 204
>gi|281207108|gb|EFA81291.1| RNA-directed RNA polymerase [Polysphondylium pallidum PN500]
Length = 2852
Score = 125 bits (313), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 249/535 (46%), Gaps = 42/535 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR-KPQ------KSICIFLA 112
R+YQ+E +A+++N ++ + TG GKT +A++LI ++ + + P+ K + +F
Sbjct: 415 REYQIESLARAIKKNTLLVIPTGLGKTLVAIMLIQQMVAVNQWTPEQQAGNHKRMVLFTV 474
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSH-CDWEKEIDQYEVLVMIPQILLYCLY 171
T LV+QQ K I++ RL +++ + + +++V ++
Sbjct: 475 NTNPLVEQQEKAIKKHNSTLTVLKLNSENRLSDRKINFKVQSKRPDIIVATCDSIINLFN 534
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
R + + +IFDE HHA +H Y K+M + + + PRI G++ASP G+
Sbjct: 535 TRKLCISDFHTIIFDEVHHA--TGDHSYTKVMTHYKEMEAKLYPRILGLSASPSSGED-- 590
Query: 232 AQANLPKSINSLENLLDAKVY--SVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ + +I +E +L + V+ ++ +LES + V + Q + +
Sbjct: 591 -RIKITGNIMKMEKVLASSVFRPNLPPTINLES--NQLVFTLTQ------EEKDCFKVVK 641
Query: 290 EQLAE------IKREQYISALSRKLHDHQSLRNTTKQLNR--LHDSMKFCLENLGVCGAL 341
E++ E ++ ++ + ++H S R+ KQ +H+ +K E LG +
Sbjct: 642 EKINERLKTIMMESNYFLKGMELSDNNHPSFRSNLKQFYTWTVHNDLKVSNE-LGDILRI 700
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
+++++G E L N +++ L A Q I + + V+
Sbjct: 701 F-EWLMVTGVEGFNQFL-----NYLENDLASTAIQEGRSRDFIEELHNLVVEKGGKRVVN 754
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV 461
+ + + +L L + + + I+FV + T+R+L ++L+ + +VG
Sbjct: 755 SSRYQRVVEKLTEKLDSEEKVINFRGIIFVKKRSTSRSLVHMLKKEPINSKVNAKIIVGH 814
Query: 462 NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
N G M + I+ KFR G+ LLVAT V EEG+D+ TC V+ FD + S IQ
Sbjct: 815 N-GEDGMDSEKQERIMVKFREGQSKLLVATSVLEEGIDVNTCNFVLCFDDDLDMRSMIQR 873
Query: 522 RGRAR-MPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM--DRTSSDAFTCS 573
RGRAR + E+ ++ ++D+++ +++ EIM D++S++ T S
Sbjct: 874 RGRARNKEEGEFWYVKSHEEVNKMDILRRSEALLNQVITEIMHQDKSSNEEVTYS 928
>gi|226528435|ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea mays]
gi|194705648|gb|ACF86908.1| unknown [Zea mays]
gi|414870636|tpg|DAA49193.1| TPA: endoribonuclease Dicer [Zea mays]
Length = 329
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 112/199 (56%), Gaps = 8/199 (4%)
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYLIT 1261
P+SA D+ +E LLG+ F+ + L+ A H SF NR G Y+RLE+LGD VL L++
Sbjct: 42 PMSAK-DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMS 100
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++ Y L+PG LT LR+ V+ + A VAV + ++FL + L + I +++ M
Sbjct: 101 REVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAPKLQDQICFFIEEMR 160
Query: 1322 T-PSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
P + + + PKVL D+VES +GAI LDS F+ VW++ + DP++ L
Sbjct: 161 KYPVHSNGLLD---PPKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADPLIGLETLGK 217
Query: 1381 NPIRELLELCNSYDLDLQF 1399
+P+ EL E C ++F
Sbjct: 218 HPVSELFEFCQKTHRGVKF 236
Score = 43.9 bits (102), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 38/142 (26%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ ERLE LGD L + R +F + T+ G LTR R+ V+ L ++A L ++R
Sbjct: 83 TYERLEYLGDGVLTCLMSREVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLR 142
Query: 1098 -------DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWL 1150
DQ C F R+ P +HS P
Sbjct: 143 HKAPKLQDQ---ICFFIEEMRKYP----------VHSNGLLDPP---------------- 173
Query: 1151 HKKTIADVVEALVGAFIDDSGF 1172
K + D+VE+L+GA DS F
Sbjct: 174 --KVLCDIVESLIGAIYLDSNF 193
>gi|119850851|gb|AAI27164.1| Ddx58 protein [Mus musculus]
Length = 924
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 249/551 (45%), Gaps = 64/551 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 243 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 300
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 301 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 357
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 358 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 415
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 416 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 469
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 470 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 528
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 529 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 585
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 586 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 645
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 646 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 705
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QRELDLIKNFSKEEDRM 557
C LVI ++ V IQ+RGR R S+ L S + + + ++IK E M
Sbjct: 706 AECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIK-----EKIM 760
Query: 558 NREIMDRTSSD 568
N I+ + D
Sbjct: 761 NESILRLQTWD 771
>gi|304434770|ref|NP_001182108.1| melanoma differentiation associated gene 5 [Oncorhynchus mykiss]
gi|296923412|emb|CAZ27715.1| melanoma differentiation associated gene 5 [Oncorhynchus mykiss]
Length = 1002
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 236/534 (44%), Gaps = 80/534 (14%)
Query: 58 IARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK-SICIFLAPTV 115
+ R YQ+++ + A+E +NII+ L TG GKT +AV + E RK + + L V
Sbjct: 304 VLRDYQMDVARPALEGKNIIICLPTGSGKTRVAVYITKEHLDSRRKEGRPGKVVVLVNKV 363
Query: 116 ALVQQQA-----KVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
LV+Q K ++ +KV G S+ S D + + ++++ Q+L L
Sbjct: 364 PLVEQHYSTEFWKFLKNK--YKVERVSGDSQLKISFTDI---VQKNDIVICTAQLLENYL 418
Query: 171 YHRF------IKMELIALLIFDECHHAQ------------VKSNHPYAKIMKDFYKPDIM 212
IK+ ++L++ DECHH Q +K H AK+ K+ + D +
Sbjct: 419 ERAHSGDDDGIKLSDLSLIVIDECHHTQKGGVYNHIMIRYLKQKHKNAKLKKE--QKDTV 476
Query: 213 KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA-----------------KVYSVE 255
+P+I G+TASP VG GA + I + LDA K+ + E
Sbjct: 477 AIPQILGLTASPGVG-GAKKIEKAEEHILRICANLDAYKIMTGNLGENKKEPHKKIATAE 535
Query: 256 D-AEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSL 314
+ ED V V+ +N T EQ +++EQ + ++Q +
Sbjct: 536 ERKEDPFGDVLKGVMNAIHIHAELNPTCDLGTQNYEQWV-VQKEQNAAK-----EENQKV 589
Query: 315 RNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG--DETMRNELIEAEGNTIDDSLCR 372
R + L + ++++ LG + ++ L DE ++ ++ + I
Sbjct: 590 RVCAEHLRQYNEALY-----LGKTIRMWDAFSFLDKYFDEELKKKVAPGDEEAI------ 638
Query: 373 FASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLI--GILSTFRLQQHMKCIVF 430
+E F +D S + E+ K P + L + IL F ++ + I+F
Sbjct: 639 -IKTDTERFLFTLFKD---SKVELQELAKLPQYENNSLAKLRTKILHEFTSREKARGIIF 694
Query: 431 VNRIVTARALS-YILQNLKF--LASWRCHFLVGV-NAGLKSMSRNAMKSILEKFRSGELN 486
+A AL+ ++ +N KF + CH + G + +K M+ + +L KF++ E+N
Sbjct: 695 TKTRRSAIALAQWVQENSKFEEVGVKACHVIGGGGQSAVKPMTAAEQRDVLNKFQNAEIN 754
Query: 487 LLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
LL+AT V EEGLDI C VIR++L + IQ+RGR R S Y + G+
Sbjct: 755 LLIATTVAEEGLDIAACNFVIRYELVTNEVAMIQARGRGRAEDSSYTLVAGEGS 808
>gi|256077012|ref|XP_002574802.1| ribonuclease III [Schistosoma mansoni]
Length = 907
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 168/373 (45%), Gaps = 51/373 (13%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH-DTVDEGELTRRRSNAVNNSN 1082
L++ T ++ LERLE GD+FL + ++ + DEG L+ +R + V+N++
Sbjct: 532 LIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSNAH 591
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L +A Y Q F P + F P S +E +YD R
Sbjct: 592 LCDIACDLKWYEYCTGQTFSPPEHFL-----PPCYSVASEAC---KYDPRL--------- 634
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
+ L K++AD+VEAL+G F+ SG AA L + I E
Sbjct: 635 ----YTRLTDKSLADMVEALIGCFLLRSGLSAAFNLLHYFQICPE--------------- 675
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLI 1260
+ L + L+ LG+ F LL +A H S + G YQRLEFLGD++L ++I
Sbjct: 676 -IILELNQRFFQLQEKLGYYFKGIELLAEAMTHQSSINKQYWGNYQRLEFLGDSILGHII 734
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
++YL+ P PG LT RS +V+N ANV V+ Y F+ F + L I++
Sbjct: 735 SNYLFQKCPNSSPGALTTARSTVVSNINLANVVVEHDIYPFIDFGNCSLKACIDDIKSIH 794
Query: 1321 ITPSS--------TREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
S T++V G KVL D+ ES LGAI +DS N I+ FL
Sbjct: 795 RQTDSHFERIELITKKVSSGLNV-KVLADVFESILGAIFVDSNGNHQVASSIIHRFLGKT 853
Query: 1373 LK--FSNLQLNPI 1383
+ +NL + P+
Sbjct: 854 MNSVITNLLVQPV 866
>gi|157059804|gb|AAI52541.1| Ddx58 protein [Mus musculus]
Length = 925
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 249/551 (45%), Gaps = 64/551 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 302 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 359 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 417 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 470
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 471 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 529
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 530 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 586
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 587 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 646
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 647 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 706
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QRELDLIKNFSKEEDRM 557
C LVI ++ V IQ+RGR R S+ L S + + + ++IK E M
Sbjct: 707 AECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIK-----EKIM 761
Query: 558 NREIMDRTSSD 568
N I+ + D
Sbjct: 762 NESILRLQTWD 772
>gi|153945886|ref|NP_766277.3| probable ATP-dependent RNA helicase DDX58 [Mus musculus]
gi|341940435|sp|Q6Q899.2|DDX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
Full=DEAD box protein 58; AltName: Full=RIG-I-like
receptor 1; Short=RLR-1; AltName: Full=Retinoic
acid-inducible gene 1 protein; Short=RIG-1; AltName:
Full=Retinoic acid-inducible gene I protein; Short=RIG-I
gi|148673498|gb|EDL05445.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Mus musculus]
gi|189442795|gb|AAI67209.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [synthetic construct]
Length = 926
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 249/551 (45%), Gaps = 64/551 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 302
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 303 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 359
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 360 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 417
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 418 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 471
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 472 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 530
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 531 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 587
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 588 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 647
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 648 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QRELDLIKNFSKEEDRM 557
C LVI ++ V IQ+RGR R S+ L S + + + ++IK E M
Sbjct: 708 AECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIK-----EKIM 762
Query: 558 NREIMDRTSSD 568
N I+ + D
Sbjct: 763 NESILRLQTWD 773
>gi|226510363|ref|NP_001140816.1| uncharacterized protein LOC100272891 [Zea mays]
gi|194701228|gb|ACF84698.1| unknown [Zea mays]
gi|413948833|gb|AFW81482.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 376
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 159/388 (40%), Gaps = 68/388 (17%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
A +E LL +QF R LL +A H SF+ YQRLEF+GDA L +++LY P L
Sbjct: 42 ARVERLLRYQFCDRALLEEALTHQSFSDGALSYQRLEFVGDAALGLAFSNFLYLTNPTLG 101
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITP 1323
PG L+ LR+ ++ + A VAV Y L L + ++ D P
Sbjct: 102 PGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQELMHDLATAP 161
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
VK PKVL D+VE+ A+ +D F+L +WK+ +PI+ + P+
Sbjct: 162 YGGSVVK----APKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPV 217
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
L ELC + QF + +K G + +VF+ L E Q++
Sbjct: 218 TTLHELCQKHGKVAQFKTWQKDGMIVV---------NVFVGGEMVGLGSSE------QKV 262
Query: 1444 FSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGS 1503
+KL AA + +LIG + + + A + + +
Sbjct: 263 IAKLNAA----------------RDALGKLIGGAKQQVLINCAANGLVD----------- 295
Query: 1504 SCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE 1563
DI + R + +L E C W P F KE G +H + F V V+ +
Sbjct: 296 --DIA---------ELRECKQKLIEQCIRKHWPKPIFKLEKEGGPAHERNFVCSVQVDTQ 344
Query: 1564 APEKIIECIGEPQAKKKGAAEHAAEGML 1591
+ IGE ++ K A AA M+
Sbjct: 345 TGTFV--TIGESMSRVKDAENSAAHKMV 370
Score = 44.3 bits (103), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 21/138 (15%)
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
S +RLE +GDA L A L+L + T+ G L+ R+ ++ L ++A R++L +
Sbjct: 72 LSYQRLEFVGDAALGLAFSNFLYLTNPTLGPGALSTLRAANISTEKLARVAVRHDLYPLL 131
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK--GHHWLHKKT 1154
R R+CPR+ + Q+ +L ++ + G K
Sbjct: 132 R-------------RKCPRL------DLLVGQFIESVKQELMHDLATAPYGGSVVKAPKV 172
Query: 1155 IADVVEALVGAFIDDSGF 1172
+AD+VEA+ A D F
Sbjct: 173 LADIVEAIAAAVYVDCKF 190
>gi|242078881|ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
gi|241940559|gb|EES13704.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
Length = 291
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 130/249 (52%), Gaps = 14/249 (5%)
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYLIT 1261
P+SA D+A +E +LG++F + L+ A H SF R G Y+RLE+LGD VL L++
Sbjct: 21 PMSAE-DVAAIEAVLGYEFADKSLVELALTHGSFYFPYRPGDTYERLEYLGDGVLTCLMS 79
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
++ Y L PG LT LR+ V+ + A VAVD+ ++FL + L + I +++ M
Sbjct: 80 REVFRNYRTLPPGPLTRLRAANVDTEKLARVAVDRGLHRFLRHKAPKLQDQICLFIEEMR 139
Query: 1322 T-PSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
P + + + PKVL D+VES +GAI DS FN VW++ + DP++ L
Sbjct: 140 KYPVHSNGLLDP---PKVLCDIVESLIGAIYWDSDFNQEEVWRVFRTLADPLIGLETLGK 196
Query: 1381 NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKE-AIRIA 1439
+P+ EL E C ++F + E + G+ + A AT +KE A A
Sbjct: 197 HPVTELFEFCQKTRRGVKFVKDEWDKSLKVEVLIDGE-----LVASATYGPKKEIAQNRA 251
Query: 1440 SQQLFSKLK 1448
++ KLK
Sbjct: 252 AKAALDKLK 260
>gi|357118476|ref|XP_003560980.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 360
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 145/360 (40%), Gaps = 66/360 (18%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
A +E LL ++F R LL A H SF+ YQRLEFLGDA LD + +LY P L
Sbjct: 24 ARVERLLQYRFHDRALLELALTHQSFSGGAASYQRLEFLGDAALDLAFSDFLYRANPTLG 83
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITP 1323
PG+LT LR+ ++ + A VAV Y L L + ++ D+ P
Sbjct: 84 PGELTTLRAANISTEKLARVAVRHDLYPLLRRACPPLDLLVGQFIELVKQELEDDFSTAP 143
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
VK PKVL D+VE+ A+ +D ++ WK+ +P++ + P+
Sbjct: 144 YGGCVVK----APKVLADIVEAIAAAVYMDCKSDIEKFWKVTRRLFEPLITVETMHEQPM 199
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
L ELC + + QF KKG E V +F+ + E Q+
Sbjct: 200 SMLNELCQKHGMVPQFKESKKG-----EMTVI----KIFVGGALVGMGSSE------QRA 244
Query: 1444 FSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGS 1503
+KL A ++ S L PK + G P VV +D
Sbjct: 245 IAKLNA------SRDAVSKLLGDPKQQVLTTGVG--PGLVVEVED--------------- 281
Query: 1504 SCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE 1563
R + +L E C+ W P F KE+G +H + F + V VE +
Sbjct: 282 ---------------LRECKQKLNEQCSKKHWPKPIFKLEKEDGPAHDRKFMYSVEVETQ 326
Score = 41.2 bits (95), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
S +RLE LGDA L A L+ + T+ GELT R+ ++ L ++A R++L +R
Sbjct: 55 SYQRLEFLGDAALDLAFSDFLYRANPTLGPGELTTLRAANISTEKLARVAVRHDLYPLLR 114
>gi|308455471|ref|XP_003090269.1| hypothetical protein CRE_17662 [Caenorhabditis remanei]
gi|308265013|gb|EFP08966.1| hypothetical protein CRE_17662 [Caenorhabditis remanei]
Length = 907
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 260/574 (45%), Gaps = 100/574 (17%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI-CIFLAPTVAL 117
R YQ+ELC+ A++ N IV TG GKT +A ++ + + +K+ +FLAP +
Sbjct: 176 RNYQVELCRLAVQGINTIVTAPTGTGKTVVAANIVKNHFEVRAREEKTFKALFLAPNTTI 235
Query: 118 VQQQAKVIEESIGFKVR-TFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILL-YCLYH--- 172
+QQQA + + C GS + + + +++V PQ+++ C H
Sbjct: 236 LQQQADRLNHFLAHSYDLKICQGS----DNSPTRQAVLSNDIIVATPQMIVNLCNEHEDE 291
Query: 173 -------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-------PDIMKVPRIF 218
+F + ++++FDECH +N PYA IM++++ PD ++P+I
Sbjct: 292 LSEFSNEKFY-LSTFSIILFDECH--STVNNSPYANIMREYHTLKNMGTMPDNHELPQIV 348
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVV--RVYQY 274
G+TAS G + + + + I S+ LLD + S E A++L+ F SP++ ++Y +
Sbjct: 349 GLTASLGTGDANNVEK-VIQHIASMCALLDVEKLSTVCEYADELQMF--SPIIPEKIYSF 405
Query: 275 GPVINDTSSSYVTCSEQLAE----------IKREQY--------------------ISAL 304
+ +S + +Q+ + + RE+Y +S L
Sbjct: 406 EKNKDGSSGRFAELVKQIMDNITMMLETAFVSREEYSKVTNGEKTPAKDHVAYLNWLSCL 465
Query: 305 SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGN 364
R + + Q+ + +N + + C + + DE ++ E E
Sbjct: 466 KRSVAE-QNFQGNRNNINEALNMLDICYRSQSFNSNFNPRTAFKYFDEKVK----EQE-- 518
Query: 365 TIDDSLCRFASQ-ASEVFAAICRR-DGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRL 421
RF ++ EV R + + SD+ P + +L++ +L+ R
Sbjct: 519 -------RFLTERMKEVLHQYYPRLEQLGSDV--------PIENPMILKIEDLLTENHRE 563
Query: 422 QQHMKCIVFVNRIVTARALSYILQNLKFLASW--RCHFLVGVNAGLK-----SMSRNAMK 474
Q+ + I+FV A L IL + + L S R +++G+N + ++SR+
Sbjct: 564 NQNSRAIIFVQTRYDAITLKNILCDNENLLSQNIRTDYILGLNKTTEGSEDSAISRSDQV 623
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
L++F SG + +LV+T V EEGLDI C LVI+++ V + +Q RGR R S
Sbjct: 624 EKLKQFGSGGIRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGRGRANGSRSIL 683
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD 568
+ N L+ + +K++++M++ ++R + +
Sbjct: 684 IT---NDPSLEKQERANKDKEKMSKAALERINEN 714
>gi|77415358|gb|AAI06096.1| Ddx58 protein, partial [Mus musculus]
Length = 763
Score = 124 bits (311), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 236/520 (45%), Gaps = 56/520 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 302
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 303 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 359
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 360 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 417
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 418 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 471
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 472 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 530
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 531 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 587
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 588 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 647
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 648 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
C LVI ++ V IQ+RGR R S+ L S +
Sbjct: 708 AECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSAD 747
>gi|449453708|ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 124 bits (311), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 23/221 (10%)
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYS 1266
ASLD +E +L ++F + LL +AF S++ ++RLE++GD+VL++LIT Y
Sbjct: 32 ASLD--GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYF 89
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST 1326
P L PG LT LR+ V+ + A VA+ F+++L + L + I +
Sbjct: 90 SNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEF---------G 140
Query: 1327 REVKEGP-------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ 1379
R ++E P + PKVL D+VES++GA+ DS F ++TVWKI ++P++ ++
Sbjct: 141 RSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNF-IDTVWKIFKELMEPLITLKTMK 199
Query: 1380 LNPIRELLELCNSYDLDLQFPSLKKGGK---FLAEAKVTGK 1417
+P+ EL E+C L L+F + K L E +V GK
Sbjct: 200 KHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGK 240
Score = 50.1 bits (118), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 24/135 (17%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
S ERLE +GD+ L + + R + + + G LTR R+ V+ L ++A + Y+R
Sbjct: 67 SFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR 126
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
D L ++ E +HS +AP K +AD
Sbjct: 127 HNKAD------LHQKIEEFGRSIEEYPLHSNGMIKAP------------------KVLAD 162
Query: 1158 VVEALVGAFIDDSGF 1172
+VE+ +GA DS F
Sbjct: 163 IVESTIGAVFADSNF 177
>gi|195995859|ref|XP_002107798.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
gi|190588574|gb|EDV28596.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
Length = 1418
Score = 124 bits (311), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 105/195 (53%), Gaps = 7/195 (3%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
RKYQL+L A E N IVYL TG GKT IAVL+I +L + K ++ IFL TV
Sbjct: 56 RKYQLDLAVIAQERNTIVYLETGSGKTLIAVLVIRQLYRELSKSLQAGGKRAIFLVNTVP 115
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
LV QQAK I + F V G K +W+ D+ V+V PQ LL L +
Sbjct: 116 LVHQQAKFIADQTSFCVGKLFGKCNSDKRRSNWKDFFDKNNVIVGTPQTLLRLLELNIVN 175
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
M++I L++FDECHHA +HPY++IM + P+I G+TA + KG + +
Sbjct: 176 MQMINLIVFDECHHAT--KHHPYSRIMDAVKALEEQGRPKILGLTA--CIFKGECKPSKV 231
Query: 237 PKSINSLENLLDAKV 251
P+ + LE L + +
Sbjct: 232 PQRLAELEEKLSSTI 246
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 236/555 (42%), Gaps = 83/555 (14%)
Query: 877 VENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRA 936
V+N + T++ Y + NI ++ + S + ++ + Y +++ QPL
Sbjct: 871 VKNYGHWVTNQVDVYALRNICYDLSPLSRFPTDKRLTYKAYYHRKYHTRIENSNQPLFAV 930
Query: 937 KPLFRLR-NLLHNRKL----EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPS 991
K L R L+H + +ES + F L PELC + FS + LP
Sbjct: 931 KTLHRFPVALVHENCISPCNNTTESKKSNSGFVHLVPELCLVH--PFSASMWMLSQFLPL 988
Query: 992 IMHRLENLLVAIELKHLLSAS--FPEGAEVSAEMLL------------KALTTEKCQERF 1037
++++E +A E+ + + + E + LL ++LT +E+
Sbjct: 989 TLYKIEKNCLAYEMIDYIQCASILKKVTEPRRKKLLLRETTNLVDRITQSLTLPIAEEQC 1048
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ +++ +G F+K + +L+ + LT +R + L LAA+ N+ YI
Sbjct: 1049 NFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNIPSYII 1108
Query: 1098 DQPFDPCQF-----FALGRRCPRICSKET---ERTIHSQYDGRAPDDLNAEVRCSKGHHW 1149
+PF+ + F RC S ++ ERTI S ++
Sbjct: 1109 SKPFNQLKCWIPPGFTFSIRCKDDSSSDSALAERTIIE----------------SITDNF 1152
Query: 1150 LHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEAS----------QVTNICIS 1199
L K+IA+ + A+VGA + FLKW+G +E +S ++T++
Sbjct: 1153 LSVKSIAECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSISNGFDVWNEKITHMIEE 1212
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLD 1257
S S L + E LG++F++ L+ AF H S + G Y++LEF+GD++L+
Sbjct: 1213 SNSQSWLEK---LHKFEENLGYKFINIDYLILAFTHSS-SEFGDSFNYEKLEFVGDSILN 1268
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI---- 1313
YL+ YL+ + + + ++N+ + ++ +F+ L + S + E I
Sbjct: 1269 YLVIKYLFLATDQ-DITRSKFFYGIAISNEVYGLLSYAYNFHH-LFYQSPFVKEMILGFE 1326
Query: 1314 ---------------NNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNL 1358
N D++ T S + + + PK L D+ ES AI DSG NL
Sbjct: 1327 KKTADLLEGGSIPRNGNKHDWVYTIFS-KSIDDDFSIPKELADVFESLAAAIYFDSGQNL 1385
Query: 1359 NTVWKIMLSFLDPIL 1373
+TVW I + L P L
Sbjct: 1386 STVWNIYSNLLKPFL 1400
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 43/297 (14%)
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS--- 467
+L+ +L+TF+ Q I+FV+R VTA L +L + H VG G S
Sbjct: 400 KLLDVLTTFKEQD--TGIIFVDRRVTAFVLHELLVRISHTDPNLAHLNVGCVIGRSSIKS 457
Query: 468 -------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
MSR + ++ +FR + NLLVAT V EEG+D+ C +VIRFD +S++Q
Sbjct: 458 QLLGQAQMSRYEQEEVMNRFRRHKYNLLVATNVLEEGVDVSECNVVIRFDRVNHFSSYLQ 517
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDL----------IKNFSKEEDRMNREIM-------- 562
SRGRAR S Y ++ N+ LD ++ F + + I+
Sbjct: 518 SRGRARADDSSYVLMI---NRENLDAFMEEYNSWHSVEKFLRSSPELLNTIVSGISKSLF 574
Query: 563 --DRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
D +++DA T S + + V+++GA ++ +S+L RY + + + P+F Y +
Sbjct: 575 SNDNSTTDASTISSK--FVVETTGAEVNLFSAISVLLRYSQSMINGK----SPEFEYETN 628
Query: 621 LGGTICHIILPANAPIHQ--IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
T I L + P + I G S + AKK + L+A + LH++G + D L P
Sbjct: 629 DDRTRAKIKLIFSNPPEKTTIEGPMMQSKKIAKKASALEACKFLHEVGEITDNLEPN 685
>gi|308469221|ref|XP_003096849.1| hypothetical protein CRE_24668 [Caenorhabditis remanei]
gi|308241264|gb|EFO85216.1| hypothetical protein CRE_24668 [Caenorhabditis remanei]
Length = 1030
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 258/574 (44%), Gaps = 100/574 (17%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI-CIFLAPTVAL 117
R YQ+ELC+ A++ N IV TG GKT +A ++ + + +K+ +FLAP +
Sbjct: 299 RNYQVELCRLAVQGINTIVTAPTGTGKTVVAANIVKNHFEVRAREEKTFKALFLAPNTTI 358
Query: 118 VQQQAKVIEESIGFKVR-TFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILL-YCLYH--- 172
+QQQA + + C GS + + + +++V PQ+++ C H
Sbjct: 359 LQQQADRLNHFLAHSYDLKICQGS----DNSPTRQAVLSNDIIVATPQMIVNLCNEHEDE 414
Query: 173 -------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-------PDIMKVPRIF 218
+F + ++++FDECH +N PYA IM++++ PD ++P+I
Sbjct: 415 LSEFSNEKFY-LSTFSIILFDECH--STVNNSPYANIMREYHTLKNMGTMPDNHELPQIV 471
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVV--RVYQY 274
G+TAS G + + + + I S+ LLD + S E A++L+ F SP++ ++Y +
Sbjct: 472 GLTASLGTGDANNVEKAI-QHIASMCALLDVEKLSTVCEYADELQMF--SPIIPEKIYSF 528
Query: 275 GPVINDTSSSYVTCSEQLAE----------IKREQY--------------------ISAL 304
+ +S + Q+ + + RE+Y +S L
Sbjct: 529 EKNKDGSSGRFAELVRQMMDNITMMLETAFVSREEYSKVTNGEKTPAKDHVAYLNWLSCL 588
Query: 305 SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGN 364
R + + Q+ + +N + C + + DE ++ E E
Sbjct: 589 KRSVAE-QNFQGNRNNINEALSMLDICYRSQSFNSNFNPRTAFKYFDEKVK----EQE-- 641
Query: 365 TIDDSLCRFASQ-ASEVFAAIC-RRDGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRL 421
RF ++ EV R + + SD+ P + +L++ +L+ R
Sbjct: 642 -------RFLTERMKEVLHQYYPRLEQLGSDV--------PIENPMILKIEDLLTENHRE 686
Query: 422 QQHMKCIVFVNRIVTARALSYILQNLKFLASW--RCHFLVGVNAGLK-----SMSRNAMK 474
Q+ + I+FV A L IL + + L S R +++G+N + ++SR+
Sbjct: 687 NQNSRAIIFVQTRYDAITLKNILCDNENLLSQNIRTDYILGLNKTTEGSEDSAISRSDQV 746
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
L++F SG + +LV+T V EEGLDI C LVI+++ V + +Q RGR R S
Sbjct: 747 EKLKQFASGGIRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGRGRANDSRSIL 806
Query: 535 LVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSD 568
+ N L+ + +K++++M++ ++R + +
Sbjct: 807 IT---NDPSLEKQERANKDKEKMSKAALERINEN 837
>gi|449526603|ref|XP_004170303.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 2-like
[Cucumis sativus]
Length = 338
Score = 124 bits (310), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 169/395 (42%), Gaps = 71/395 (17%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
LE +L + F ++ LL +A H S++ Y+RLEF+GD+ + IT+Y + P L
Sbjct: 7 ALERILSYNFNNKSLLEEALTHXSYS-ASASYERLEFVGDSAIGLAITNYFFLASPHLHQ 65
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
G L+ LR+ V+ + A VAV Y ++ DS + + +VD + S+
Sbjct: 66 GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGRLM 125
Query: 1334 RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELLELCN 1391
+ PKVL D+VES GA+ +D F+L +W I+ L+PI LQ+ P+ L ++
Sbjct: 126 KAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFQVGQ 185
Query: 1392 SYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAG 1451
+ K G +A V GK F+++ ++ Q+ ++L AA
Sbjct: 186 RNGKQVDIKHWKNGSNSIASVHVDGK----FVASGSS-----------MQKEIARLNAA- 229
Query: 1452 YVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPS 1511
E+++K S + L + D + E +I
Sbjct: 230 -------REALIKLSDSMDTELKHF--------VTIDGIDESFEI--------------- 259
Query: 1512 LTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIEC 1571
A+ +L+++C W+ P + K+ G SH ++F V KI C
Sbjct: 260 --------EGAKQKLHDVCCKRKWQKPNYSVEKDLGPSHERIFVCSV--------KIATC 303
Query: 1572 ------IGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+G+ +++ K A AA M+ L+ +L
Sbjct: 304 YGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338
Score = 43.1 bits (100), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 27/170 (15%)
Query: 1003 IELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH 1062
I L+ +LS +F + +L +ALT S ERLE +GD+ + A+ + FL
Sbjct: 6 IALERILSYNFNNKS-----LLEEALTHXSYSASASYERLEFVGDSAIGLAITNYFFLAS 60
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
+ +G L+ R+ V+ L ++A + L Y+R R P + K E
Sbjct: 61 PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVR-------------RDSPAMDVKVKE 107
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
+G + G K +AD+VE++ GA D F
Sbjct: 108 FVDSVALEGSS---------VHYGRLMKAPKVLADIVESVAGAVYVDVNF 148
>gi|116283738|gb|AAH27369.1| Ddx58 protein [Mus musculus]
Length = 763
Score = 123 bits (309), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 236/520 (45%), Gaps = 56/520 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 302
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 303 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 359
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 360 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 417
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 418 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 471
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 472 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 530
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 531 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 587
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 588 TRRFEEKLEELEKVSRDPSNELPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 647
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 648 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
C LVI ++ V IQ+RGR R S+ L S +
Sbjct: 708 AECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSAD 747
>gi|328772805|gb|EGF82843.1| hypothetical protein BATDEDRAFT_23044 [Batrachochytrium
dendrobatidis JAM81]
Length = 1492
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 150/286 (52%), Gaps = 30/286 (10%)
Query: 36 SGVGFGAESSVGAQKTDKDPKQIA-----RKYQLELCKKAMEENIIVYLGTGCGKTHIAV 90
S F SSV T P + R YQL L + A ENII L TG GKT IA+
Sbjct: 23 SNATFQEISSVTDMDTTDSPSYQSNVVEPRSYQLWLFELAKAENIIAVLPTGTGKTLIAL 82
Query: 91 LLIYELAHLIRKPQ---KSICIFLAPTVALVQQQAKVIEESIGFKVRT-FCGGSKRLKSH 146
LLI E H I+ P+ + I + L PT+ LV QQA+ I+ + K+RT F +K H
Sbjct: 83 LLI-EHMHSIQSPEAANRKISVMLVPTIPLVSQQAQYIK--MHSKLRTGFSSEGVSMKKH 139
Query: 147 --CDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMK 204
W+ +++ +V+VM +IL L +I + ++ L++FDECHHA ++ HPY +M+
Sbjct: 140 DFKYWKCALEENDVMVMTAEILKTSLDRGYISISMLNLIVFDECHHA--RNLHPYRVLMQ 197
Query: 205 DFYKPDIMKV-PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESF 263
Y + P+IFG+TASP GKG + + SI L++ L + + E + ++
Sbjct: 198 THYALCSEAIRPKIFGITASPAFGKGDNEE-----SIKYLQSSLHCRAVT-STYESISNY 251
Query: 264 VSSPVVRV-YQYGPVINDTSSSYVT---CS---EQLAEIKREQYIS 302
VSSPV RV Y + S SY CS E +++ RE +I+
Sbjct: 252 VSSPVERVMYFVNSPFYELSESYTKIYECSGLAENISDQLRESHIA 297
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 166/372 (44%), Gaps = 55/372 (14%)
Query: 1019 VSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAV 1078
++ E L L +S ERLEILGD+FLK HLF L+ + DEG LT R A
Sbjct: 1049 INIETLQTVLVASSTDLPYSYERLEILGDSFLKIHQSLHLFALNPSQDEGWLTTSRMVAE 1108
Query: 1079 NNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLN 1138
N L + A LQ I F Q+
Sbjct: 1109 QNLELCRRATEVGLQGLILTTRFSRKQW-------------------------------- 1136
Query: 1139 AEVRCSKGHHWLH---KKTIADVVEALVGAFIDDSGFKAATAFLKWI---GIQVE----F 1188
V +KGH + KK +ADV EA++G + D G A+ ++ + Q E F
Sbjct: 1137 --VPPAKGHDSMQSMPKKILADVTEAIIGGCLIDGGIVGASEAVRSLLNRDYQSEWGLYF 1194
Query: 1189 EASQVTNICISSK--SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS--FNRLGGC 1244
Q+ S F+ SL +E +L + F + +L +A H S F+ G
Sbjct: 1195 TQYQLHRNVTPSHLVRFIGDIDSLVTLRIEAVLNYTFQDKSILWEALTHSSSSFSICGLN 1254
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGDAVL ++IT YLY+ PG ++ L+S +V NQ A V++ +L
Sbjct: 1255 YQRLEFLGDAVLSFIITKYLYTQLGSSSPGVISHLKSEMVCNQFLACVSIRLGLIDWLRV 1314
Query: 1305 DSNVLSETINNY----VDYMITPSSTRE---VKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
+ ++ Y ++++ P+ + + PK+ GD+ E+ LGAI +DS F+
Sbjct: 1315 KKSDTVWIVDAYAQQVIEHLSQPADSIQKIFWAHMTTAPKICGDVYEAILGAIFVDSKFS 1374
Query: 1358 LNTVWKIMLSFL 1369
+ V + +L+ L
Sbjct: 1375 IEKVDEFVLNSL 1386
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 32/291 (10%)
Query: 404 FF--SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL---QNLKFLASWRCHFL 458
FF S K+ LI IL FR + IVFV + A + ++ +L+FL + L
Sbjct: 407 FFAVSPKVQCLIDILLEFRYIESFCGIVFVQQRSYASVIRMLIIAHPDLQFL---KPKLL 463
Query: 459 VG------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
+G GL MS +S++ FR G+ NLL+AT+V EEGLD IRFD
Sbjct: 464 IGHGKRKRAVGGLNGMSSTTQQSVVTAFRCGDCNLLIATQVAEEGLD-------IRFDKT 516
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS----- 567
+T+ S+IQSRGRAR S++ LV+ +Q+E + ++E + ++ +
Sbjct: 517 QTLISYIQSRGRARQNCSQFIVLVNKDDQQEEQSLHAIQQKEAHLQSLLVQSVNEKPEAV 576
Query: 568 DAFTC----SEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGG 623
+FTC S++ Y + +GA ++ + L YC+ L + + D
Sbjct: 577 SSFTCDSDDSDKFQYNIAHTGAVLNLYNSIKFLQEYCATLSVNGTDSQPVYTTSIDGDFN 636
Query: 624 TICHIILP--ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
I +P I G+ ++++ AK+ A + ++ LHK ++D+
Sbjct: 637 MYVTIQMPHLVRKECQGIQGSSANTIKKAKRLAAFEMVKLLHKFQEVDDHF 687
>gi|351713047|gb|EHB15966.1| Putative ATP-dependent RNA helicase DDX58 [Heterocephalus glaber]
Length = 925
Score = 122 bits (307), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 224/514 (43%), Gaps = 45/514 (8%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL A E +N I+Y TGCGKT +++L+ + +K +F A V +
Sbjct: 245 RSYQLELALPAKEGKNTIIYAPTGCGKTFVSLLICEHHLQKFSQGRKGKVVFFANQVPVY 304
Query: 119 QQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E +G++V G + + + I+ +++++ PQILL L + +
Sbjct: 305 EQQKTVFSRYFERLGYRVTGISGAT---AENVPVAQTIESNDIIILTPQILLNNLKNGTV 361
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ +HPY IM ++ + + +P++ G+TAS VG
Sbjct: 362 PSLSIFTLMIFDECHNTS--KHHPYNMIMFNYLEQKLGGSSDPLPQVIGLTASVGVGDAK 419
Query: 231 SAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVIND----TSSS 284
+ + + I L LDA V + E+ E+LE V P + P + S
Sbjct: 420 NTEEAIA-YICKLCASLDASVIATVKENLEELEQVVYKPQKISRKVKPRTTNRFKLIISQ 478
Query: 285 YVTCSEQLAEIKREQ--YISALSRKLHDHQSLRNTTKQLNRLHDSMKFC--LENLGVCGA 340
+ +E +A+I E+ Y+ + ++ Q ++++ + E +C A
Sbjct: 479 LMKETEHMAKIISEELGYLFEIQDRVFGTQKYEQWIVEVHKACRVFQLPDKEEESRICKA 538
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
+ Y+ S + LI +E + L + V AA D I DL+
Sbjct: 539 M---YLYTSHLRKYNDTLIISEDAQMKAGLDYLKDFFNNVRAAAF--DEIEQDLTRRFEE 593
Query: 401 KEPFFSK------------KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
K P K L LI + + + + I+FV AL ++
Sbjct: 594 KLPELENVSMDPSNENPKLKDLHLI-LQEEYHVNPKTRTILFVKTRALVDALKKWIEENS 652
Query: 449 FLASWRCHFLV--GVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
L + L G + M+ A K +L+ FR+ N+L+AT V +EG+DI C LV
Sbjct: 653 ALNFLKPGILTGRGRTSNKTGMTLPAQKCVLDSFRANGDNILIATSVADEGIDIAQCNLV 712
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
I ++ V IQSRGR R S+ L + +
Sbjct: 713 ILYEYVGNVIKMIQSRGRGRAKGSKCYLLSSNAD 746
>gi|388495198|gb|AFK35665.1| unknown [Medicago truncatula]
Length = 344
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 173/387 (44%), Gaps = 61/387 (15%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
+A +E ++G+ F ++ LL +A H S+ Y+RLEF+GDAVL + I+++L+ VY +
Sbjct: 9 VAAVEKIIGYTFRNKNLLEEALTHSSYPE-SVSYERLEFIGDAVLGHAISNHLFLVYTNV 67
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
QL+ LRS V+ + A AV ++++ ++ L+E I + + V
Sbjct: 68 DQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAIVLY 127
Query: 1332 GP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELL 1387
G + KVL D+VES A+ +D F+L +W ++ L+PI+ ++L+ P+ L
Sbjct: 128 GGAVKASKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVTMLY 187
Query: 1388 ELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKL 1447
E+C+ + + G K A V G ++F A+ + Q+ +KL
Sbjct: 188 EICHKNGKKVDIRHSRNGDKSTASVYVDG---ELF------------AVASSDQKDIAKL 232
Query: 1448 KAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDI 1507
AA KS+ + R++ T + D FE I EP
Sbjct: 233 DAA-------------KSAVQKLERVLPITTTTPDNCKGLDGTFE---IEEP-------- 268
Query: 1508 GSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEK 1567
+ +LY LC W P + ++EG K+F V++ P+
Sbjct: 269 ---------------KQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVTS--VQVATPDG 311
Query: 1568 IIECIGEPQAKKKGAAEHAAEGMLWCL 1594
++ +GE +++ K + AA M+ L
Sbjct: 312 TLKMLGEEKSRVKDSQNSAASLMIRAL 338
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +ALT E S ERLE +GDA L +A+ HLFL++ VD+ +L+ RS V+
Sbjct: 25 LLEEALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEK 84
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L + A N L YIR + + R + E Q GRA V+
Sbjct: 85 LARAAVSNCLHRYIRLKTHSLAEHI-------REFAAAVE-----QEKGRAIVLYGGAVK 132
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
S K +ADVVE++ A D F
Sbjct: 133 AS--------KVLADVVESVAAAVYVDLDF 154
>gi|449526605|ref|XP_004170304.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 339
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 171/393 (43%), Gaps = 64/393 (16%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
M +E +L ++F ++ LL +A H S+ Y RLEF+GD+ + I++Y + +YP L
Sbjct: 7 MTPIERILSYKFKNKKLLEEALTHSSYLN-SPSYDRLEFIGDSAIGLAISTYFFPLYPDL 65
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
GQLT LR+ V+ + A VAV Y ++ +++ L + + + D + ++
Sbjct: 66 NQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGG 125
Query: 1332 GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLN--PIRELLEL 1389
+ PKVL D+VES GAI +D F+L +W I+ FL PI +L+ + P+ L E
Sbjct: 126 LVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFED 185
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
C + + +KG ++A+ V D+ + S + Q+ ++L A
Sbjct: 186 CQKKGKQVHIENQEKGSTYVAKVYV---DRRLVASGS------------SKQKPIARLNA 230
Query: 1450 AGYVPKTKSLESILKSSPKSEARLIGYD--ETPINVVAADDNVFEKLKISEPQGGSSCDI 1507
A EA +I D +T I V D +
Sbjct: 231 A------------------REALIILSDSTDTKIKRVVTIDGI----------------- 255
Query: 1508 GSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEK 1567
G + A+ +L++ C W+ P++ +E L H F V+I
Sbjct: 256 ------DGSFEIEGAKQKLHDFCCRKKWQSPSY---SKEVLGHPHGRRFVCCVKISTFND 306
Query: 1568 IIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
IG+ +++ K A AA M+ L++ YL
Sbjct: 307 THSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 339
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L +ALT S +RLE +GD+ + A+ + F L+ +++G+LT R+ V+
Sbjct: 22 KLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLLRAANVSTE 81
Query: 1082 NLLKLAARNNLQVYIR 1097
L ++A + L Y+R
Sbjct: 82 KLARVAVLHRLYSYVR 97
>gi|350631467|gb|EHA19838.1| hypothetical protein ASPNIDRAFT_119009 [Aspergillus niger ATCC
1015]
Length = 1232
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 156/613 (25%), Positives = 269/613 (43%), Gaps = 80/613 (13%)
Query: 116 ALVQQQAKVIEESI------GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
AL +Q I + GF R + K W+ + ++ V Q+L
Sbjct: 1 ALSEQHTHTIRNRVPSIWCRGFTSR---DQVEHWKDKAIWDNALSGIKIAVSTYQVLYDA 57
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H F+K+ ++LLIFDE HH K +H KIM+ Y +
Sbjct: 58 LSHGFVKLSQMSLLIFDEAHHC--KKDHVANKIMQVHYH------------------KQH 97
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSP---VVRVYQYG--PVINDTSS 283
S NLPK + + + + + S+E E +L S +P ++ Q+ P+I
Sbjct: 98 QSGVQNLPKILGLTASPILSDLSSLEIVESNLGSICKTPRQYYAQLLQFTNRPLILPRLP 157
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL---ENLGVCGA 340
+Y + + E+ LS + S + +KQL + M+ + LG+ A
Sbjct: 158 TYTIPNCSVKAPILEKLCGILSSEDEVPSSSKMKSKQLKHIRRFMQTSESINQELGIWAA 217
Query: 341 L-HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
+ ++ E+MR + AE I + FA + I R G D C
Sbjct: 218 TEYMRKSIMHFKESMR---MGAEKTNISNYGKDFAME-------ILTRLGKLQD--CSPA 265
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCHFL 458
++ S L+ LS ++ +VFV + T AL ++++N + + C
Sbjct: 266 IQPEEISPMCQCLLDELSK-AYREGFCGLVFVTQRATVLALKWLIENHPLTSHLFTCGTF 324
Query: 459 VGVNAGLKSMS--------RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
+G++ S + RN ++ LEKFR G LNL++ T EEG+D+ C V+ F+
Sbjct: 325 IGMSTTQYSKTELGNLHDIRNQTET-LEKFRQGSLNLIITTDALEEGIDVPACNTVLNFN 383
Query: 511 LPETVASFIQSRGRARMPQSEYAFLV--DSG----NQRELDLIKNFSKEEDRMNREI-MD 563
++ SFIQ RGRAR S++ ++ +SG + E++ I+ K ++ R+I +
Sbjct: 384 CQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEIELVQKLQNAERRQIPAN 443
Query: 564 RTSSDAFTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
D + ERI +D +GA + V L+ +CSKLP + + KP F Y +
Sbjct: 444 ELDFDKY----ERISLSLDIDRTGAQLIMREAVGYLYNFCSKLPAQLYVSNKPLFTYERN 499
Query: 621 LGGTICHII-LPAN---APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQE 676
G ++ LP+N + S ++ A++DA L+A + L++ G +NDYL+P +
Sbjct: 500 NYGRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKALYQAGLVNDYLVPTQ 559
Query: 677 DNATEDEPMLFSS 689
+ + ++F S
Sbjct: 560 VSDHLEGDIIFRS 572
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 179/439 (40%), Gaps = 80/439 (18%)
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
+ D LP Q+ + PSI H +E ++A L+ LS +
Sbjct: 796 FVDKLPSMFAQVALFT------------PSISHEVEVYMIAQILRQELSLRSVTPWQ-RI 842
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L A+ + R + L +GDAF+KY LFL H EG L+ + ++++
Sbjct: 843 DLLAIAIRPTSIEHRATFRSLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDA 902
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRR-CPRICSKETERTIHSQYDGRAPDDLNAE 1140
L ++ L ++ + + G+R P + S G P A
Sbjct: 903 GLAHAIHQSGLGKFLISKHLN-------GKRWVPPLVS------------GIEPASNEAR 943
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE-FEASQVTNICIS 1199
R + T+AD+ +A+VGA D G A A + +++ + AS + + S
Sbjct: 944 QRS------IGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDGTYS 997
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL--GGCYQRLEFLGDAVLD 1257
AS + +E LLG+ F + L +++ HPS L Y+RL FLG +VL+
Sbjct: 998 KTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1057
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV------DQS-------------- 1297
+++ SYL+ + P ++ L+S NN +A+ +Q+
Sbjct: 1058 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1117
Query: 1298 ------FYKFLIFDSNVLSETINNYVDYMITPSST--REVKEGPRCP----------KVL 1339
+ FL S+ LS ++++V + E+ E P +VL
Sbjct: 1118 TTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALGDMRVL 1177
Query: 1340 GDLVESSLGAILLDSGFNL 1358
D+++S GA+ +DS L
Sbjct: 1178 SDIIQSIFGAVFIDSQATL 1196
>gi|291236967|ref|XP_002738409.1| PREDICTED: Dicer Related Helicase family member (drh-1)-like
[Saccoglossus kowalevskii]
Length = 877
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 237/537 (44%), Gaps = 69/537 (12%)
Query: 41 GAESSVGAQKTDKDPKQIA---RKYQLELCKKAM-EENIIVYLGTGCGKTHIAVLLIYEL 96
AE++ + K D+ + I R YQ EL K ++ N+IV TG GKT IA + L
Sbjct: 166 AAENAESSDKVDEPEEDIVIELRPYQAELVKPSIFGHNVIVSAPTGSGKTRIAAFIT--L 223
Query: 97 AHLIRKPQKSICIFLAPTVALVQQQAKVIEE--SIGFKVRTFCGGSKRLKSHCDWEKEID 154
HL ++ + + + L V LV+Q K + + +KV CG S + + ++
Sbjct: 224 NHL-KQRENAKVLLLVNKVPLVEQHYKKEFKLLTSKYKVSKICGESA---ARVSLKHLVE 279
Query: 155 QYEVLVMIPQILLYCLYH--RFIKMEL--IALLIFDECHHAQVKSNHPYAKIMKDFYK-- 208
+ +V+++ QIL L + K+EL +LLIFDECHH Q Y IM ++ K
Sbjct: 280 KNDVVILTAQILENALNNGEDNEKLELTDFSLLIFDECHHTQ--KGEVYNNIMHEYLKLK 337
Query: 209 --PDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENL--LDAKVYSVEDAEDLESFV 264
+ ++P+I G+TAS VG + + + NL +D + E + LE
Sbjct: 338 IEEKVYQLPQILGLTASLGVGGARTEYKAVTHILQICANLDCMDLRTVQAE-TKGLEEHN 396
Query: 265 SSP-----VVRVYQYGP--------------VINDTSSSYVTCSEQLAEIKREQYISALS 305
P VV + P +I+D C L EQ+++ L
Sbjct: 397 KKPHKVVEVVADREKDPFGDELKKMMKKIHSLIDDKDVESDKCD--LGTQVYEQWVTGLG 454
Query: 306 RKLHDHQS--LRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEG 363
Q LR + L + +D++ L N V +Y+ D+ R E +G
Sbjct: 455 TTAVKKQDRKLRTCAEHLRKYNDAL---LINDSVRMEDALNYLQEFYDDEERRE----KG 507
Query: 364 NTIDDSLCRFASQASEVFAAICRRDGIASD-LSCIEVLKEPFFSK-KLLRLIGILST-FR 420
F S E+ + + + + +++ K+ F KL RL L +
Sbjct: 508 ---------FDSTDKELLSIFEGKLNFELNYYNLVKISKKKMFENPKLKRLQSQLEKEYS 558
Query: 421 LQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV--NAGLKSMSRNAMKSILE 478
++ + I+F + +AL ++N L + L G N+ KSM++ + I+
Sbjct: 559 TKEGSRGIIFTKTRESTKALVSWIKNTPDLNFLKVDRLTGTGPNSTSKSMTQKDQQDIIL 618
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
KF G+LN LVAT V EEGLDI C +VIR++L + +Q+RGRAR S Y +
Sbjct: 619 KFHKGDLNCLVATTVAEEGLDIPECNVVIRYNLVTNEIAMVQARGRARAKDSTYTLV 675
>gi|449459586|ref|XP_004147527.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 353
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 171/393 (43%), Gaps = 64/393 (16%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
M +E +L ++F ++ LL +A H S+ Y RLEF+GD+ + I++Y + +YP L
Sbjct: 21 MTPIERILSYKFKNKKLLEEALTHSSYLN-SPSYDRLEFIGDSAIGLAISTYFFPLYPDL 79
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
GQLT LR+ V+ + A VAV Y ++ +++ L + + + D + ++
Sbjct: 80 NQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGG 139
Query: 1332 GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLN--PIRELLEL 1389
+ PKVL D+VES GAI +D F+L +W I+ FL PI +L+ + P+ L E
Sbjct: 140 LVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLLFED 199
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
C + + +KG ++A+ V D+ + S + Q+ ++L A
Sbjct: 200 CQKKGKQVHIENQEKGSTYVAKVYV---DRRLVASGS------------SKQKPIARLNA 244
Query: 1450 AGYVPKTKSLESILKSSPKSEARLIGYD--ETPINVVAADDNVFEKLKISEPQGGSSCDI 1507
A EA +I D +T I V D +
Sbjct: 245 A------------------REALIILSDSTDTKIKRVVTIDGI----------------- 269
Query: 1508 GSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEK 1567
G + A+ +L++ C W+ P++ +E L H F V+I
Sbjct: 270 ------DGSFEIEGAKQKLHDFCCRKKWQSPSY---SKEVLGHPHGRRFVCCVKISTFND 320
Query: 1568 IIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
IG+ +++ K A AA M+ L++ YL
Sbjct: 321 THSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 353
Score = 42.4 bits (98), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L +ALT S +RLE +GD+ + A+ + F L+ +++G+LT R+ V+
Sbjct: 36 KLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLLRAANVSTE 95
Query: 1082 NLLKLAARNNLQVYIR 1097
L ++A + L Y+R
Sbjct: 96 KLARVAVLHRLYSYVR 111
>gi|156371137|ref|XP_001628622.1| predicted protein [Nematostella vectensis]
gi|156215603|gb|EDO36559.1| predicted protein [Nematostella vectensis]
Length = 261
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 110/199 (55%), Gaps = 20/199 (10%)
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPSFNR----LGGCYQRLEFLGDAVLDYLITSYLYS 1266
++A +E LG+ F R +LLQA H S+ R + Y++LEFLGDA+LDYL+T ++
Sbjct: 5 ELALVEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQ 64
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV--------- 1317
+P+L PG +TDLRS +VNN + A + + + F+K + S L + + +V
Sbjct: 65 RFPRLSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEK 124
Query: 1318 -----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
++T E PKVLGDL E+ LGA+ +D G + W ++ L PI
Sbjct: 125 ETRPDQLLLTTVEDGRGGEAIEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTPI 184
Query: 1373 LKFSNLQL--NPIRELLEL 1389
++ ++ L +P R+L+E+
Sbjct: 185 IEHYSVHLPISPTRQLVEM 203
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 25/161 (15%)
Query: 1022 EMLLKALTTEKCQERFS-----LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
++LL+ALT +S E+LE LGDA L Y V RH+ + G +T RS
Sbjct: 21 DILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPRLSPGAITDLRSA 80
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQP---FDPCQFFALGRRCPRICSKET---ERTIHSQYD 1130
VNN +L L + + ++R F + F RR I KET + + + D
Sbjct: 81 VVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFV--RRLSEIEEKETRPDQLLLTTVED 138
Query: 1131 GRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
GR + + K + D+ EAL+GA D G
Sbjct: 139 GRGGEAIEV------------PKVLGDLFEALLGALYVDCG 167
>gi|449493233|ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 121/221 (54%), Gaps = 23/221 (10%)
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYS 1266
ASLD +E +L ++F + LL +AF S++ ++RLE++GD+VL++LIT Y
Sbjct: 32 ASLD--GIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYF 89
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST 1326
P L PG LT LR+ V+ + A VA+ F+++L + L + I +
Sbjct: 90 SNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEF---------G 140
Query: 1327 REVKEGP-------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ 1379
R ++E P + PKVL D+VES++GA+ DS +++TVWKI ++P++ ++
Sbjct: 141 RSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKELMEPLITLKTMK 199
Query: 1380 LNPIRELLELCNSYDLDLQFPSLKKGGK---FLAEAKVTGK 1417
+P+ EL E+C L L+F + K L E +V GK
Sbjct: 200 KHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGK 240
Score = 47.8 bits (112), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
S ERLE +GD+ L + + R + + + G LTR R+ V+ L ++A + Y+R
Sbjct: 67 SFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLR 126
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
D L ++ E +HS +AP K +AD
Sbjct: 127 HNKAD------LHQKIEEFGRSIEEYPLHSNGMIKAP------------------KVLAD 162
Query: 1158 VVEALVGAFIDDSG 1171
+VE+ +GA DS
Sbjct: 163 IVESTIGAVFADSN 176
>gi|45385112|gb|AAS59532.1| DEAD/H box polypeptide RIG-I [Mus musculus]
Length = 926
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 248/552 (44%), Gaps = 66/552 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRK---PQKSICIFLAPTV 115
R YQLEL A + +N I+ TGCGKT +++L+ H ++K QK +F A +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLI---CEHRLKKFPCGQKGKVVFFANQI 301
Query: 116 ALVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 302 PVYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNN 358
Query: 173 RFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVG 227
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 359 GAIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVG 416
Query: 228 KGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSS 283
+A+ + + I L LDA V + ++ +LE V P + R V + TS+
Sbjct: 417 DAKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSN 470
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL------- 332
++ QL + + E+ +S +L ++N T K + K C
Sbjct: 471 TFKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADK 529
Query: 333 -ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI------- 384
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 530 EEESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETERE 586
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSY 442
R +V + P LR + ++ + L+ K I+FV AL
Sbjct: 587 LTRRFEEKLEELEKVSRGPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKK 646
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLD 499
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+D
Sbjct: 647 WIEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGID 706
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QRELDLIKNFSKEEDR 556
I C LVI ++ V IQ+RGR R S+ L S + + + ++IK E
Sbjct: 707 IAECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIK-----EKI 761
Query: 557 MNREIMDRTSSD 568
MN I+ + D
Sbjct: 762 MNESILRLQTWD 773
>gi|393238282|gb|EJD45820.1| hypothetical protein AURDEDRAFT_124545 [Auricularia delicata
TFB-10046 SS5]
Length = 1121
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 171/731 (23%), Positives = 289/731 (39%), Gaps = 124/731 (16%)
Query: 17 GTKICAATSAVVEECSVAVS-GVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENI 75
G K A A V + +S V A+SSVG +P+ E+ ++++ NI
Sbjct: 237 GQKQKAMAQAEVHKLRGMMSPAVSSMAKSSVGTPADYSEPE--------EMLNESLKRNI 288
Query: 76 IVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSIC------------IFLAPTVALV 118
+ L +G G+THIAVL + + A K + C ++ VAL
Sbjct: 289 TIVLESGSGETHIAVLRLRLEVERQAALGTNKASWTSCPPCARPLTPLRPLWTQWQVALC 348
Query: 119 QQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQQ +++E + V G + S W++ + +V+V PQ+LL L H ++
Sbjct: 349 QQQHRLLERELPCSVGFISGALQPDKWTSAGVWKQVVSINQVVVSTPQVLLDALRHAYMD 408
Query: 177 MEL-IALLIFDECHHAQVKSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVVGKGASAQA 234
+ L + LLIFDE HHA HPY +IM++FY P + I G+TASP
Sbjct: 409 LGLDVGLLIFDEAHHAL--RGHPYNRIMREFYDPLEAADKQFIMGLTASP---------- 456
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVR--VYQYGPVINDTSSSYVTCSEQL 292
+N +LL + + E+ E+L + V P ++ +Y + P C + L
Sbjct: 457 -----LNVEYDLLCRALATRENEEELRAHVFPPTLKHVIYYHRP-----RHEQPECLQSL 506
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDE 352
+ + + L D+ +R+ L HD +E L +
Sbjct: 507 SSVYDD-------LDLEDNPFVRHLRHALQTPHDGPVDAVERERQEARLAKP---VRKRN 556
Query: 353 TMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP--------- 403
T+ ++ ++ + D+ ++ F A + ++ L+ P
Sbjct: 557 TVTHKTLKTLLKSALDTFYELGPSVADWFVA-----------ASVDKLRRPIDASQEFSF 605
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRI-VTARALSYILQNLKFL-ASWRCHFLVGV 461
F SK+ + + + Q ++ I VT R S +L + F R F VG
Sbjct: 606 FNSKRTTEDVALPARHPRQSEASGSIYSGIIFVTLRTASLLLSKVIFAHPKTRDAFHVGY 665
Query: 462 NAGLKSMSR-------------NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
G + R A + L+ G LN L+A V EEGLD+ C IR
Sbjct: 666 LMGWSNDERRRNVPELLVGGNDKAQEETLKDCADGRLNWLIAPSVLEEGLDVARCNCAIR 725
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK--NFSKEEDRMNREIMDRTS 566
F+ + ++QSRGRAR +S + + + + ++K +E + +E M + +
Sbjct: 726 FNPGNNITGWVQSRGRARARRSSFVVMFSTMQDGQEHMLKCTALEREMNAKYKEAMRKRA 785
Query: 567 SDAFTCSEERIY-KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD----- 620
A E R Y KV+ +GA ++ + + +C KLPH + P + F
Sbjct: 786 VGAPPREERRHYFKVEQTGALLTLNNPTAHISHFCDKLPHSAYARMVPIYDIFPPDGFME 845
Query: 621 -----------------LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLH 663
G T+ + + + A + S +AAK+ + L
Sbjct: 846 PLAPGQALPAPKEESKLFGCTLMLLNVVSPALRKHVTPMVHPSEKAAKRQVAFDVCQKLF 905
Query: 664 KLGALNDYLLP 674
G +N LLP
Sbjct: 906 NAGLVNPNLLP 916
>gi|125555283|gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indica Group]
Length = 276
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 7/197 (3%)
Query: 1199 SSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN---RLGGCYQRLEFLGDAV 1255
+ F+P ++A +E LLG++F + L+ QA H SF R G Y+RLE+LGDAV
Sbjct: 26 APPGFVPPMGPGEVAAVESLLGYEFRDKALVEQALTHGSFYYPYRPGVTYERLEYLGDAV 85
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINN 1315
L +++ ++ Y +L+PG LT LR+ V+ + A VAV + FL + L I +
Sbjct: 86 LTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITD 145
Query: 1316 YVDYM-ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
+++ + + P + + + PKVL D+VES +GAI DS FN VW++ DP++
Sbjct: 146 FIEELSMYPIHSNGLLD---PPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLIS 202
Query: 1375 FSNLQLNPIRELLELCN 1391
L +P+ EL E C
Sbjct: 203 LETLGKHPVSELFEFCQ 219
Score = 47.8 bits (112), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 24/135 (17%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ ERLE LGDA L V R +FL + + G LTR R+ V+ L ++A + L ++R
Sbjct: 74 TYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLR 133
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
+ + L + + + IHS P K + D
Sbjct: 134 HKAPN------LDGQITDFIEELSMYPIHSNGLLDPP------------------KVLCD 169
Query: 1158 VVEALVGAFIDDSGF 1172
VVE+L+GA DS F
Sbjct: 170 VVESLIGAIYCDSNF 184
>gi|349603393|gb|AEP99241.1| Endoribonuclease Dicer-like protein, partial [Equus caballus]
Length = 223
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 96/161 (59%), Gaps = 15/161 (9%)
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+
Sbjct: 1 CYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 60
Query: 1304 FDSNVLSETINNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAI 1350
S L I+++V + + + + + R PK +GD+ ES GAI
Sbjct: 61 AVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAI 120
Query: 1351 LLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
+DSG +L VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 121 YMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 161
Score = 42.4 bits (98), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 19/137 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 3 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 60
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 61 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 108
Query: 1155 IADVVEALVGAFIDDSG 1171
+ D+ E+L GA DSG
Sbjct: 109 MGDIFESLAGAIYMDSG 125
>gi|393246694|gb|EJD54202.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1453
Score = 120 bits (302), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 202/454 (44%), Gaps = 85/454 (18%)
Query: 968 PELCQLKIIGFSKDIGSSLSL-LPSIMHRLENLLVAIEL-KHLLSASFPEGAEVSAEMLL 1025
P+ C++ I+ + + LS+ LPSI+ +++ ++ +L +HL + +S LL
Sbjct: 922 PQFCRVDILAPAM---ARLSMFLPSILRDMQSAILGRDLHRHLFTTGL-----LSVVPLL 973
Query: 1026 ---KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
A+TT + ++ +R+E LGD LK+ L +H EG LT ++ + V+NSN
Sbjct: 974 DVRTAITTPLTGDAYNYQRVETLGDCVLKFLTSVQLLDMHPEWHEGYLTMKKDHIVSNSN 1033
Query: 1083 LLKLAARNNLQVYI-RD----QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDL 1137
L + A RN L ++I RD + + P AL + TE + D P
Sbjct: 1034 LAREAKRNKLALWIIRDRMVAKKWQPQYLTALPDTSMDV-DPPTEDPPAKEKDENVPR-- 1090
Query: 1138 NAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI--QVEFEASQVTN 1195
L K +ADVVE+L+G ++ G+ AA L+ +GI +E E V +
Sbjct: 1091 ------------LSTKVLADVVESLIGVAHENGGYDAAVDMLRRLGIGQSMELEWKTVAD 1138
Query: 1196 IC---ISSKSFLPLSASLD-MATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLE 1249
++ LP D + TLE +LGH+F H LL +A H ++ + Y+RLE
Sbjct: 1139 RVHSIVNRIEPLPHGYPEDYVRTLEQMLGHRFEHPSLLFEALTHANYTGDVHTVSYERLE 1198
Query: 1250 FLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF----ANVAVDQSFYKF---- 1301
FLGD++LD ++T +Y +L P +T R VN + AN++ +Q
Sbjct: 1199 FLGDSLLDNVVTEQVYHSPRRLPPVLMTRCRIATVNTEMLAYCCANLSTEQQHMTVQRAP 1258
Query: 1302 -------------------LIFDSNVLSETINNYVDYMITPSSTREV--------KEGP- 1333
I SNV + DY+ E +E P
Sbjct: 1259 DRPEGATFVPTSRTVRLPTFIRMSNV--AMVGVVRDYIAGYERVHERIAERFAHGREFPW 1316
Query: 1334 ------RCPKVLGDLVESSLGAILLDSGFNLNTV 1361
R PK LGD+VES + AI LD+ ++ V
Sbjct: 1317 TDLFELRAPKFLGDIVESLIAAIYLDTRGSMAAV 1350
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 123/230 (53%), Gaps = 23/230 (10%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVL-LIYELAHLIRKPQKSICIFLAP 113
P++ RKYQ E+ ++++ NII+ L TG GKTHIAVL L E+ FL P
Sbjct: 6 PERETRKYQEEMLNESLKRNIIIVLETGSGKTHIAVLRLRLEVERQAALGTNKASWFLVP 65
Query: 114 TVALVQQQAKVIEESIGFKVRTFCGG--SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
TVAL QQQ +V+E + V G + S W++ + +V+V PQ+LL L
Sbjct: 66 TVALCQQQHRVLERELPCSVGLISGALQPDKWTSASVWKQVVSVNQVVVSTPQVLLDALR 125
Query: 172 HRFIKM-ELIALLIFDECHHAQVKSNHPYAKIMKDFYKP-DIMKVPRIFGMTASPVVGKG 229
H ++ + + LLIFDE HHA HPY +IM++FY P P I G+TASP+
Sbjct: 126 HAYLDLGRDVGLLIFDEAHHAL--RGHPYNRIMREFYDPLQPDDKPFIMGLTASPL---- 179
Query: 230 ASAQANLPKSINSLE-NLLDAKVYSVEDAEDLESFVSSPVVR--VYQYGP 276
++++LE NLL + + E+ E+L + V P ++ +Y + P
Sbjct: 180 ---------NVDTLEQNLLCRALTTRENEEELRAHVFPPTLKHVIYDHRP 220
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 109/241 (45%), Gaps = 30/241 (12%)
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
A + L+ F G LNLL+AT V EEGLD+ C VIRF+ + S++QSRGRAR +S
Sbjct: 448 AQEETLKDFAEGRLNLLIATSVLEEGLDVARCNCVIRFNPANNITSWVQSRGRARRERSS 507
Query: 532 YAFL---VDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY-KVDSSGACI 587
+ + + G ++ L +E + +E M + A E + Y KV+ +GA +
Sbjct: 508 FVVMFSDIQDGQEQMLRWTA-LEREMNAKYKEAMRERAVGAPQREEHQHYFKVEETGALL 566
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG-------GTI------------CHI 628
+ + + +C KLPH + P + F G G C +
Sbjct: 567 TLDNATAHISHFCDKLPHSAYARMVPIYDIFPPDGFMEPLAPGQALPALKEESKLFGCTL 626
Query: 629 ILP-ANAPIHQIVGTP--QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM 685
LP +P + TP S +AAK+ +A + L G +N LLP +D+P
Sbjct: 627 TLPNVVSPALRKHVTPMVHPSEKAAKRQVAFEAYQKLFNAGLVNPNLLPLR---PDDDPE 683
Query: 686 L 686
L
Sbjct: 684 L 684
>gi|403297888|ref|XP_003939778.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Saimiri
boliviensis boliviensis]
Length = 937
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 246/557 (44%), Gaps = 76/557 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +A+L+ HL + P QK +F A +
Sbjct: 244 RSYQLELALPAKKGKNTIICAPTGCGKTFVALLICEH--HLKKFPQGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G++V G + + ++ ++ +++++ PQIL+ L +
Sbjct: 302 VYEQQKSVFSKYFERLGYRVTGISGAT---ADNAPVKQMVENNDIIILTPQILVNNLKNG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
S L I L LDA V + ++ E+LE V P + IND +
Sbjct: 417 AKSTDEAL-DYICKLCASLDASVIATVRDNLEELEQVVYKPQKFFRKVESRINDKFKCII 475
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
A++ RE +L++++ + L N ++ NR + K+ C+
Sbjct: 476 ------AQLMRE--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 525
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI E + D+L S V AA D
Sbjct: 526 PDKDEESRICKAL---FLYTSHLRKYNDALIINEDARMKDALHYLKDFFSNVRAA--GFD 580
Query: 389 GIASDLS---------CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARA 439
DL+ V ++P S + +L + R + H+ V RA
Sbjct: 581 ETEQDLTQRFEEKLQELESVSRDP--SNENPKLEDLCFILREEYHLNPETITILFVKTRA 638
Query: 440 LSYILQNLKFLASWRCHFLV-GVNAGLKSMSRN------AMKSILEKFRS-GELNLLVAT 491
L L+N + + FL G+ G ++N A K IL+ F++ G+ N+L+AT
Sbjct: 639 LVDALKNW-IEGNPQLSFLKPGILTGRSKTNQNTGMTLPAQKCILDSFKAHGDHNILIAT 697
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS 551
V +EG+DI C LVI ++ V IQ+RGR R S+ L S E + I +
Sbjct: 698 SVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSSAAVIEKENINMY- 756
Query: 552 KEEDRMNREIMDRTSSD 568
+E MN I+ + D
Sbjct: 757 -KETMMNDSILRLQTWD 772
>gi|14475569|emb|CAC41974.1| putative RNA dependent RNA polymerase [Dictyostelium discoideum]
Length = 1883
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 238/538 (44%), Gaps = 82/538 (15%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-----KSICIFLA 112
I R YQ+E ++ ++N ++ L TG GKT ++++ + E+ + + K I +FL
Sbjct: 30 IPRDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQDNSCGDSKRIALFLV 89
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA IE KV G ++ + +Y+VLV L+ L
Sbjct: 90 DRVPLVTQQAGAIEAITNLKVCKLYGEINDSRTRAFVRSK--EYDVLVSTVGSLVNLLEV 147
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
R + + + FDE HHA H + K++ K D+ PRI G+TAS +V G S
Sbjct: 148 RHLNILDFYFITFDEVHHA--TGEHDFNKVVDYIRKTDLNYRPRILGLTAS-LVSIGNST 204
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV------ 286
+D S++D E E +S RV++ ++ +++ S +
Sbjct: 205 --------------IDIVQRSIKDME--ERMLS----RVFKPTSLLTNSTQSELQPELVS 244
Query: 287 ---TCSEQLAEIKREQYISALSRKLH--------DHQSLRNT---TKQLNRLHDSMKFCL 332
+ E L E +++ + S++L D +R K L RL D L
Sbjct: 245 FKTSGQESLIETSICEFLVSNSKELQIFLNYSDVDLDGVRGNPSFLKALERL-DKYSKQL 303
Query: 333 ENLGV--CGALHASYILLSGDETMRNELIEAEGN----TIDDSLCRFASQASEVFAAICR 386
E++ + L Y LLS ++ EG T D L + +Q +E++ +
Sbjct: 304 ESIYIEYTKVLIELYALLS--------VLSTEGPKQVLTRLDLLMQSTNQENELYNKLLE 355
Query: 387 -RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR----------LQQHMKCIVFVNRIV 435
R I+ +E F K R ++S+ LQ+ ++ +VFV
Sbjct: 356 LRYYISGQYED----RESNFEKGSTRYRKLISSLEYAISDASDGELQKDLRILVFVETRF 411
Query: 436 TARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
A L+ +L+ F LVG N G+ M +SI+ KFR G+ L+V T V E
Sbjct: 412 GASNLTSMLKKEPFQEYLHTKRLVGHN-GVDGMDSEKQQSIIRKFRDGKCRLIVTTNVLE 470
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE 553
EG+D+Q C +VI +D ++ S IQ RGRAR ++E F++ + ++L ++ S E
Sbjct: 471 EGIDVQDCNIVICYDGILSLKSLIQRRGRAR-SKNESKFIIIYNDDKDLKILDILSSE 527
>gi|402217569|gb|EJT97649.1| ribonuclease III [Dacryopinax sp. DJM-731 SS1]
Length = 1400
Score = 120 bits (301), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 203/498 (40%), Gaps = 85/498 (17%)
Query: 931 QPLLR----AKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSL 986
QPL+ A PL RL L H+ S + +Y L PELC + S S +
Sbjct: 775 QPLIEVGKMAPPLSRLSPLCHS---APSSRNPPAKY---LMPELCVKYCLSLSSYRTSMI 828
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
LPS+M R+E +L+ E ++ + LL ALT+ + +RLE+LG
Sbjct: 829 --LPSVMARVEEMLLVQECNSVVFHD-----RLDEVFLLPALTSPSAGAGYDYQRLELLG 881
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAAR-NNLQVYIRDQPFDPCQ 1105
D+FLKY LF+ EG L R ++NS L + R L YI+ + P Q
Sbjct: 882 DSFLKYISSIFLFVTCPQDGEGSLHIHRQRIISNSALQFHSDRVGQLPQYIQSRQHSPRQ 941
Query: 1106 F----FALGRRCPRICSKETER-------TIHSQYDG----------------------- 1131
+ F L C +E+ I + DG
Sbjct: 942 WCPPNFLLYHPCMASALDTSEKFIQGMEERIEASNDGPTAGGSPPESGVTKALESHQANA 1001
Query: 1132 ----------RAPDDLNAEVRC---SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
R+P +A R + H L K++ADV EA++GA + A
Sbjct: 1002 ETSPDNSTVSRSPMPYSARERALMREEQHQELGDKSVADVAEAVLGAAWLTGQREMALYV 1061
Query: 1179 LKWIGIQV------EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQA 1232
+G+ + +F PLS + +E +LGH+F + L A
Sbjct: 1062 CHILGLPMTRMGSWDFLRDHAHIFFHEELDIGPLSQP-KVEAVEAILGHKFKNPFLAATA 1120
Query: 1233 FVHPSFNRLG-GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
H S + CY+RLEF+GDA+LD++ LY + +L G LT L+ +V+N A A
Sbjct: 1121 LTHSSMSSTDFPCYERLEFIGDAILDFVTVRLLYMRWGELHEGWLTMLKGAIVSNAALAA 1180
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP------------RCPKVL 1339
VD + ++I DS L ET+++Y + PKVL
Sbjct: 1181 FCVDLGLHHYIIHDSPHLVETVSSYAKEITKAKEEDLAAAAAEDRAPGEYWVTLEPPKVL 1240
Query: 1340 GDLVESSLGAILLDSGFN 1357
D+VE+ LGAI + F+
Sbjct: 1241 SDIVEALLGAIYVSDSFD 1258
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 20/279 (7%)
Query: 406 SKKLLRLIGILSTFRLQQ--HMKCIVFVNRIVTARALSYIL-QNLKFLASWRCHFLVGVN 462
S +LL L+ +L ++ + I+FV R TA+AL+ +L +N + L + R L+G +
Sbjct: 218 SPRLLTLLQVLKQMMAKEKDRFRGIIFVYRRTTAKALADLLNRNAQVLPNVRARPLIGSS 277
Query: 463 AGLKSMSRNA----MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
A L M NA +FR G +NLLV T +G + L ++ C +VI FD A+
Sbjct: 278 AVL--MDPNADHLTKTQATTQFRDGTINLLVTTGIGVD-LSVERCSIVIVFDSFSAHAAG 334
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNF------SKEEDRMNREIMDRTSSDAFTC 572
+ S + L++ G Q+++ + F K E+ + S
Sbjct: 335 QLRQSHLLKITSIFLILIEKGKQKDIQALSAFLPRRSKEKSEEESTPPAAEHPRSTGIDS 394
Query: 573 SEERIYK--VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHII 629
+E V +GA +SA + +L RY S + + ++ + C I
Sbjct: 395 EDEDQASILVPETGARVSALDALQVLTRYVS-IKEKSAVSLNVDYHVMGENNRIFRCTIR 453
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGAL 668
P +A + + S AA++ A A E+L+ G L
Sbjct: 454 FPPSAELEDVTSESCPSKAAARRQAAYMACEELNARGLL 492
>gi|74215044|dbj|BAE33508.1| unnamed protein product [Mus musculus]
Length = 733
Score = 120 bits (301), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 231/505 (45%), Gaps = 56/505 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 302
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 303 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 359
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 360 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 417
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 418 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 471
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 472 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 530
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 531 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 587
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 588 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 647
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 648 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRA 525
C LVI ++ TV IQ+RG +
Sbjct: 708 AECNLVILYEYVGTVIKMIQTRGES 732
>gi|115468004|ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|75254269|sp|Q69KJ0.1|RTL3_ORYSJ RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3
gi|51091751|dbj|BAD36550.1| CAF protein-like [Oryza sativa Japonica Group]
gi|113595641|dbj|BAF19515.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|125597181|gb|EAZ36961.1| hypothetical protein OsJ_21299 [Oryza sativa Japonica Group]
Length = 299
Score = 120 bits (301), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN---RLGGCYQRLEFLGDAVLDY 1258
F+P ++A +E LLG++F + L+ +A H SF R G Y+RLE+LGDAVL
Sbjct: 29 GFVPPMGPGEVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTC 88
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
+++ ++ Y +L+PG LT LR+ V+ + A VAV + FL + L I ++++
Sbjct: 89 VVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIE 148
Query: 1319 YM-ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN 1377
+ + P + + + PKVL D+VES +GAI DS FN VW++ DP++
Sbjct: 149 ELSMYPIHSNGLLD---PPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLET 205
Query: 1378 LQLNPIRELLELCN 1391
L +P+ EL E C
Sbjct: 206 LGKHPVSELFEFCQ 219
Score = 47.8 bits (112), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 24/135 (17%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ ERLE LGDA L V R +FL + + G LTR R+ V+ L ++A + L ++R
Sbjct: 74 TYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLR 133
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
+ + L + + + IHS P K + D
Sbjct: 134 HKAPN------LDGQITDFIEELSMYPIHSNGLLDPP------------------KVLCD 169
Query: 1158 VVEALVGAFIDDSGF 1172
VVE+L+GA DS F
Sbjct: 170 VVESLIGAIYCDSNF 184
>gi|66804721|ref|XP_636093.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60464394|gb|EAL62541.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2417
Score = 120 bits (301), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 238/538 (44%), Gaps = 82/538 (15%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ-----KSICIFLA 112
I R YQ+E ++ ++N ++ L TG GKT ++++ + E+ + + K I +FL
Sbjct: 283 IPRDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQDNSCGDSKRIALFLV 342
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
V LV QQA IE KV G ++ + +Y+VLV L+ L
Sbjct: 343 DRVPLVTQQAGAIEAITNLKVCKLYGEINDSRTRAFVRSK--EYDVLVSTVGSLVNLLEV 400
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
R + + + FDE HHA H + K++ K D+ PRI G+TAS +V G S
Sbjct: 401 RHLNILDFYFITFDEVHHAT--GEHDFNKVVDYIRKTDLNYRPRILGLTAS-LVSIGNST 457
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV------ 286
+D S++D E E +S RV++ ++ +++ S +
Sbjct: 458 --------------IDIVQRSIKDME--ERMLS----RVFKPTSLLTNSTQSELQPELVS 497
Query: 287 ---TCSEQLAEIKREQYISALSRKLH--------DHQSLRNT---TKQLNRLHDSMKFCL 332
+ E L E +++ + S++L D +R K L RL D L
Sbjct: 498 FKTSGQESLIETSICEFLVSNSKELQIFLNYSDVDLDGVRGNPSFLKALERL-DKYSKQL 556
Query: 333 ENLGV--CGALHASYILLSGDETMRNELIEAEGN----TIDDSLCRFASQASEVFAAICR 386
E++ + L Y LLS ++ EG T D L + +Q +E++ +
Sbjct: 557 ESIYIEYTKVLIELYALLS--------VLSTEGPKQVLTRLDLLMQSTNQENELYNKLLE 608
Query: 387 -RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR----------LQQHMKCIVFVNRIV 435
R I+ +E F K R ++S+ LQ+ ++ +VFV
Sbjct: 609 LRYYISGQYED----RESNFEKGSTRYRKLISSLEYAISDASDGELQKDLRILVFVETRF 664
Query: 436 TARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
A L+ +L+ F LVG N G+ M +SI+ KFR G+ L+V T V E
Sbjct: 665 GASNLTSMLKKEPFQEYLHTKRLVGHN-GVDGMDSEKQQSIIRKFRDGKCRLIVTTNVLE 723
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE 553
EG+D+Q C +VI +D ++ S IQ RGRAR ++E F++ + ++L ++ S E
Sbjct: 724 EGIDVQDCNIVICYDGILSLKSLIQRRGRAR-SKNESKFIIIYNDDKDLKILDILSSE 780
>gi|260830681|ref|XP_002610289.1| hypothetical protein BRAFLDRAFT_93024 [Branchiostoma floridae]
gi|229295653|gb|EEN66299.1| hypothetical protein BRAFLDRAFT_93024 [Branchiostoma floridae]
Length = 846
Score = 120 bits (301), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 246/550 (44%), Gaps = 98/550 (17%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICI 109
R YQ EL + ++ +N IV TG GKTH+A+ +I E HL + K + +
Sbjct: 228 RNYQKELAEPGIQGKNTIVCAPTGSGKTHVAMYIIKE--HLDKRIFIKSGDHKGNVAKVL 285
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCG------GSKRLKSHC---DWEKEIDQYEVLV 160
L P V ++ Q RTFC KR S+ +E ++ ++ V
Sbjct: 286 VLTPEVTILDQH-----------YRTFCRFLPLYRTGKRSGSYVAKKPFEDIVESNDITV 334
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI------MKV 214
PQILL L + +K+ +L++FDECHH K + Y KIM ++ K + +
Sbjct: 335 ATPQILLNALLEKTVKITDFSLIVFDECHH--TKKDASYNKIMAEYLKIKLADPLSQANL 392
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENL---LDAKVY-SVE---DAEDLESFVSSP 267
P+I G++ASP GA + NLP + L +L LDA+V+ +VE + +LE V++P
Sbjct: 393 PQIVGLSASP----GAGGKPNLPAAEKHLLDLIASLDAEVFKTVEFPGNIAELEDEVNTP 448
Query: 268 VVRVYQYG--PV--INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQS---LRNTTKQ 320
V G P+ +T +T E L + S + + ++QS L N
Sbjct: 449 SKHVLVTGSRPIDPFRETVERMMTEIEGLLPPDLQLQYSG-PKGVQEYQSAVDLVNGKAT 507
Query: 321 LNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE- 379
R + + C L AL ++ M++ + + L F + +
Sbjct: 508 NERNTEVIHQCDHLLNYNKALQ-----MNNTARMKDAM---------EILTYFYDKLKQR 553
Query: 380 -VFAAICRR-----DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR--LQQHMKCIVFV 431
+ + RR + ++ L I ++ + + KL++L + R ++ ++ I+FV
Sbjct: 554 HKISVVERRLLDLFEAKSNQLRPISQREDMYPNPKLMKLEKEILKARQEFEEDLRGILFV 613
Query: 432 NRIVTARA-LSYILQN--LKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLL 488
A+A LS++ + L FL G + G ++ +++KF G LL
Sbjct: 614 KTRALAQAMLSWVRETPALTFLNPGVLTGSGGEDVG--RLTHGQQVDVIQKFNDGNHKLL 671
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
+AT + EEGLDI+ C +VI+++ + +Q+RGRAR + REL +
Sbjct: 672 IATSIAEEGLDIRDCNMVIKYNYATNEIAMVQARGRARAAEG-----------RELVIAD 720
Query: 549 NFSKEEDRMN 558
E+DR+N
Sbjct: 721 VHIAEKDRVN 730
>gi|326368642|gb|ADZ55452.1| retinoic acid-inducible protein I [Cyprinus carpio]
Length = 946
Score = 120 bits (301), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 243/548 (44%), Gaps = 79/548 (14%)
Query: 61 KYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
KYQ EL A++ +N I+ TGCGKT I L I E HL + P+K+ +FLA V + +
Sbjct: 255 KYQKELTAAAVQGQNTIICAPTGCGKT-IVALAISEY-HLKQFPEKAKIVFLATKVDVYE 312
Query: 120 QQAKVIEESI-----GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
QQ K+ +E +V CG L W I+ ++++VM QIL+ L
Sbjct: 313 QQYKLFKEHFSSKDPNIRVTGMCGDMDYLSVR--W--LIEHHDIVVMTAQILVNALQSAE 368
Query: 175 I-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVG-- 227
+ +E+++L++FDECH+ K HPY IM + + +P+I G+TAS +G
Sbjct: 369 VPSLEILSLILFDECHNTTGK--HPYNNIMTRYLDTKLTSSTHSLPQIVGLTASVGIGSF 426
Query: 228 -KGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
G A+ N+ + +L+ + V E ++L+S+V +P ++ + S ++
Sbjct: 427 KNGLEAENNILQLCANLDTRVITTV--TEHKDELKSYVHTPEKAFFEVQQCM---SHPFI 481
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+ + I L++K + +SL N NR + S K+ C
Sbjct: 482 RIIKNIM-----SNIEQLAQKTFNIESLSNIQ---NREYGSQKYEQWIVSVQKSCKVLQM 533
Query: 333 ----ENLGVCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEV-FAAIC 385
E +C L + ++ D + NE +A D L F Q F
Sbjct: 534 KNKDEERRICRELYNYTEHLRKYNDALIINE--DARTKDALDYLDAFFDQVRNAGFDETE 591
Query: 386 RRDGIASDLSCIEVLK---EPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALS 441
R+ D ++L+ E + KL L IL + + ++FV A A+
Sbjct: 592 RKLTALYDCQRPQLLRLATEGEQNPKLDELKFILEEEYHNNDQTRTVMFVKTRALADAMK 651
Query: 442 YILQNLKFLASWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELN-LLVATKVG 494
+ L + L+G G KS M+ N K ILE F+S + + +L+AT V
Sbjct: 652 KWIDETDSLKFLKPGVLIG--KGRKSNFTGSGMTPNNQKGILESFKSSDQSKMLIATSVA 709
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LV+ ++ V +Q RGR R S FL+ S +R +KE+
Sbjct: 710 DEGIDIPQCNLVLMYEYVGNVVKMVQVRGRGRAEGSR-CFLISSNKER-------IAKEK 761
Query: 555 DRMNREIM 562
M +E M
Sbjct: 762 INMFKEKM 769
>gi|357118011|ref|XP_003560753.1| PREDICTED: ribonuclease 3-like protein 3-like [Brachypodium
distachyon]
Length = 296
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL----GGCYQRLEFLGDAVLDY 1258
F P D+A +E LLG++F + L+ +A H S+ Y+RLE+LGD VL
Sbjct: 29 FAPPMGPEDVAAVETLLGYEFGDKSLVGEALTHGSYYYPYPPGDSTYERLEYLGDGVLTC 88
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
L++ ++ Y L PG LT LR+ V+ + A VAV+ ++FL + L I++++
Sbjct: 89 LMSREVFLTYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLRHKAPQLDGQIDDFIK 148
Query: 1319 ----YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
Y + + PKVL D+VES +GAI LDS FN VW++ + DP++
Sbjct: 149 ELCKYKYHSNGLLD------APKVLSDIVESLIGAIYLDSNFNQEVVWRVFRNLADPLIS 202
Query: 1375 FSNLQLNPIRELLELCNSYDLDLQF 1399
L +P+ ELLE C LQF
Sbjct: 203 LETLGKHPVSELLEFCQKTRRGLQF 227
Score = 47.8 bits (112), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 32/139 (23%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ ERLE LGD L + R +FL + ++ G LTR R+ V+ L ++A + + ++R
Sbjct: 74 TYERLEYLGDGVLTCLMSREVFLTYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLR 133
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH----WLHKK 1153
+ P Q DG+ DD E+ C +H K
Sbjct: 134 -------------HKAP-------------QLDGQI-DDFIKEL-CKYKYHSNGLLDAPK 165
Query: 1154 TIADVVEALVGAFIDDSGF 1172
++D+VE+L+GA DS F
Sbjct: 166 VLSDIVESLIGAIYLDSNF 184
>gi|384500233|gb|EIE90724.1| hypothetical protein RO3G_15435 [Rhizopus delemar RA 99-880]
Length = 272
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR-----KPQKSICIFLAPT 114
R+YQ +L +KA++ENII L TG GKT I+V+LI + L R + + + FL
Sbjct: 91 REYQYDLFQKALKENIITVLDTGAGKTLISVMLIKHMTTLEREARLTRRETKLAFFLVDR 150
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA VI+ + + CG S W ++ +V VM QI L LYH
Sbjct: 151 VPLVFQQASVIKANCDIVLEAICGEMDVDNWSEKRWRLIFEESDVCVMTAQIFLDALYHG 210
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGA 230
F+ ++ L+IFDECHH K HP+ IM++FY + I K P+IFGMTASP+ K +
Sbjct: 211 FLSIDKAHLIIFDECHHTTKK--HPFNLIMREFYDRCPIEKRPKIFGMTASPMHSKSS 266
>gi|147770295|emb|CAN62473.1| hypothetical protein VITISV_005321 [Vitis vinifera]
Length = 287
Score = 120 bits (300), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
+ +E +LG+ F ++ LL +A+ H S + Y+RLEF+GD+VL LIT + +YP L
Sbjct: 30 LEGVEQILGYSFTNKRLLEEAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQFFLYPDL 89
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV----DYMITPSSTR 1327
+PG+LT LRS V+ + A VA+ ++FL + + I + +Y + +
Sbjct: 90 QPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEYPLHSNGQI 149
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELL 1387
EV PKVL D+VES++GA+ +D +++TV K+ L+P++ L+++P+ EL
Sbjct: 150 EV------PKVLADVVESTIGAVFVDCNCSVDTVXKVFKGLLEPMIVPETLKVHPVTELN 203
Query: 1388 ELCNSYDLDLQFP-SLKKGG--KFLAEAKVTGKDKDVFISACATNLSRKEAI 1436
E C L L+F S ++ G F E G+ + A N + K A+
Sbjct: 204 ERCQKRGLKLEFKDSWQRRGDIDFYIEDYFAGRGEYPLRKDIALNRAAKAAL 255
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 37/171 (21%)
Query: 1010 SASFP--EGAE-------VSAEMLLKALTTEKCQE-RFSLERLEILGDAFLKYAVGRHLF 1059
+ SFP EG E + +L +A T CQ+ +FS ERLE +GD+ L + + F
Sbjct: 24 AESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQF 83
Query: 1060 LLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR-DQPFDPCQFFALGRRCPRICS 1118
L+ + G LTR RS V+ L ++A ++ L ++R +P Q +
Sbjct: 84 FLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAI----- 138
Query: 1119 KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FID 1168
E +HS P K +ADVVE+ +GA F+D
Sbjct: 139 --KEYPLHSNGQIEVP------------------KVLADVVESTIGAVFVD 169
>gi|167046039|gb|ABZ10551.1| dicer 2 [Nematostella vectensis]
Length = 1162
Score = 120 bits (300), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 24/203 (11%)
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPSFNR----LGGCYQRLEFLGDAVLDYLITSYLYS 1266
++A +E LG+ F R +LLQA H S+ R + Y++LEFLGDA+LDYL+T ++
Sbjct: 934 ELALVEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQ 993
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--ITPS 1324
+P+L PG +TDLRS +VNN + A + + + F+K + S L + + +V + I
Sbjct: 994 RFPRLSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEK 1053
Query: 1325 STREVK----------------EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSF 1368
TR + E PKVLGDL E+ LGA+ +D G + W ++
Sbjct: 1054 ETRPDQVYSKLLLTTVEDGRGGEAIEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPL 1113
Query: 1369 LDPILKFSNLQL--NPIRELLEL 1389
L PI++ ++ L +P R+L+E+
Sbjct: 1114 LTPIIEHYSVHLPISPTRQLVEM 1136
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S+ ++L+ALTT + ERLEI GDAF+KYA+ L+ V+EG L+ R V+
Sbjct: 580 SSTLILRALTTTSANDIIDHERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGLRVS 639
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLN- 1138
N L L L I +PF+P +G P S + R +H D +N
Sbjct: 640 NQQLFYLGRSRGLAPLILTKPFEP-----VGSWVPPGFSSSSMRNVHETLDVSPQHGVND 694
Query: 1139 ------------AEVRCSKGHHW----------------LHKKTIADVVEALVGAFIDDS 1170
+E++ G+ + KT+AD +EAL+GA + S
Sbjct: 695 VLNIDDEDSLDHSEIQDISGNECRGNVEPMLLPPHTFTVISDKTVADTIEALIGACLMSS 754
Query: 1171 GFKAATAFLKWIGIQV 1186
G AA ++W+ + V
Sbjct: 755 GTNAALRLMRWLDMDV 770
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 1022 EMLLKALTTEKCQERFS-----LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
++LL+ALT +S E+LE LGDA L Y V RH+ + G +T RS
Sbjct: 950 DILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPRLSPGAITDLRSA 1009
Query: 1077 AVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDD 1136
VNN +L L + + ++R F + RR R S+ E+ ++ D
Sbjct: 1010 VVNNYSLACLTIQRDFHKHMRSMSM---ALFKVVRRFVRRLSEIEEK--ETRPDQVYSKL 1064
Query: 1137 LNAEVRCSKGHHWLH-KKTIADVVEALVGAFIDDSG 1171
L V +G + K + D+ EAL+GA D G
Sbjct: 1065 LLTTVEDGRGGEAIEVPKVLGDLFEALLGALYVDCG 1100
Score = 45.8 bits (107), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
L+L+A S N + ++RLE GDA + Y I+ LYS +P + G+L+ LR + V+NQ
Sbjct: 583 LILRALTTTSANDIID-HERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGLRVSNQ 641
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
+ + ++ E + ++V + SS R V E
Sbjct: 642 QLFYLGRSRGLAPLILTKP---FEPVGSWVPPGFSSSSMRNVHE 682
>gi|357462157|ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 783
Score = 120 bits (300), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGG-CYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
+E +L ++F + LL +AF H ++ G Y+RLE++GD+VL+ +IT+ + YP L P
Sbjct: 447 VEAILEYEFKNILLLEEAFTHCTYGAENGLSYERLEYIGDSVLNLMITTEQFHAYPTLAP 506
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
G LT LR+ V+ + A VA+ ++++ +L + I ++ +EV E P
Sbjct: 507 GHLTRLRAANVDTEKLARVAIKYGLHRYVRHKKPLLGDEIQAFI---------KEVVEYP 557
Query: 1334 -------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIREL 1386
PK+L D+VES++GAI +D G ++ TVWK L P++ +Q +P EL
Sbjct: 558 LHSNGLIDVPKILADIVESTIGAIFVDCGSSIETVWKFFKKLLVPVIDPHTIQRHPSAEL 617
Query: 1387 LELCNSYDLDLQFPSLKK 1404
E C L LQF L K
Sbjct: 618 NEFCQKRGLKLQFRDLWK 635
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 28/159 (17%)
Query: 1023 MLLKALT--TEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
+L +A T T + S ERLE +GD+ L + F + T+ G LTR R+ V+
Sbjct: 460 LLEEAFTHCTYGAENGLSYERLEYIGDSVLNLMITTEQFHAYPTLAPGHLTRLRAANVDT 519
Query: 1081 SNLLKLAARNNLQVYIR-DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
L ++A + L Y+R +P LG + E +HS P
Sbjct: 520 EKLARVAIKYGLHRYVRHKKPL-------LGDEIQAFIKEVVEYPLHSNGLIDVP----- 567
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF 1178
K +AD+VE+ +GA D G T +
Sbjct: 568 -------------KILADIVESTIGAIFVDCGSSIETVW 593
>gi|353252003|pdb|4A2W|A Chain A, Structure Of Full-Length Duck Rig-I
gi|353252004|pdb|4A2W|B Chain B, Structure Of Full-Length Duck Rig-I
Length = 936
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 238/512 (46%), Gaps = 58/512 (11%)
Query: 59 ARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
AR YQ+EL + A+ +N ++ TG GKT +++L+ + +K+ +FLA V +
Sbjct: 249 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 308
Query: 118 VQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-R 173
+QQ V + E G+ V+ G + S+ EK I+ +++V+ PQIL+
Sbjct: 309 YEQQKNVFKHHFERQGYSVQGISGEN---FSNVSVEKVIEDSDIIVVTPQILVNSFEDGT 365
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ NHPY +M + + ++P+I G+TAS VG
Sbjct: 366 LTSLSIFTLMIFDECHN--TTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAK 423
Query: 231 SAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT- 287
+ + + + I SL + LD + S E+ ++L+ F++ P + V I++ ++ ++
Sbjct: 424 NIEETI-EHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISN 482
Query: 288 -CSEQLAEIKREQYISALSR--------KLHDHQSLRNTTK-QLNRLHDSMKFCLENLGV 337
SE A ++ Y+ LS+ + ++H + K +L +L D E +
Sbjct: 483 LMSETEALMRTIAYVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKE----EESRI 538
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG----IASD 393
C AL +I + LI +E I D+L S +E F + ++G +
Sbjct: 539 CRAL---FICTEHLRKYNDALIISEDARIIDAL----SYLTEFFTNV--KNGPYTELEQH 589
Query: 394 LSCIEVLKEPFF----------SKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSY 442
L+ KEP + KL L+ IL +R + ++F AL
Sbjct: 590 LTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKK 649
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELN-LLVATKVGEEGLD 499
++ L + L+G ++ M+ + K +L+ F++ + N LL+AT V +EG+D
Sbjct: 650 CMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGID 709
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
I C LV+ ++ V IQ RGR R S+
Sbjct: 710 IVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 741
>gi|348519875|ref|XP_003447455.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Oreochromis niloticus]
Length = 914
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 246/555 (44%), Gaps = 81/555 (14%)
Query: 58 IARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR-----KPQKSICIFL 111
I R YQ+E+ A+E +NIIV L TG GKT +AV + E HL R KP+K I L
Sbjct: 213 ILRDYQMEVAGPALEGKNIIVCLPTGSGKTRVAVYITKE--HLDRRKAEGKPRK--VIVL 268
Query: 112 APTVALVQQQAKVIEESIGF-----KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQIL 166
V LV+Q E + F KV G S+ S + K+ D +++ QIL
Sbjct: 269 VNKVPLVEQHYSA--EFLPFLKNKYKVERVSGDSQLKISFTEIVKKND---IIICTAQIL 323
Query: 167 LYCLYH------RFIKMELIALLIFDECHHAQ------------VKSNHPYAKIMKDFYK 208
L + + + L+I DECHH Q +K H +++K+ +
Sbjct: 324 ENYLERANGGEDEGVNLSDLTLIIIDECHHTQKGGVYNHIMMRYLKQKHKNKRLIKEQKE 383
Query: 209 PDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPV 268
P + +P+I G+TASP VG GA+ + I + LDA E+ + +
Sbjct: 384 P--VPLPQILGLTASPGVG-GATKMEKAEEHILRICANLDASRIMTRSHEEFKKEQRKII 440
Query: 269 VRVYQ-----YGPVINDTSSSYVTCSE-----QLAEIKREQYISALSRKL--HDHQSLRN 316
V V +G VI ++ +E L EQ++ R+ ++Q +R
Sbjct: 441 VSVEDRREDPFGDVIKKIMTAIHNHAELTPTCDLGSQNYEQWVVQKERQAAKDENQKVRV 500
Query: 317 TTKQLNRLHDSMKFCLENLGVCGALHASYILLSG--DETMRNELIEAEGNTIDDSLCRFA 374
+ L + +S+ NL + ++ L+ +E M+ + E + I +
Sbjct: 501 CAEHLRQYSESL-----NLSNTIRMQDAFSFLNKYYEEEMKKKTAPEEEHKIQIT----- 550
Query: 375 SQASEVFAAICRRDGIASDLSCIEVL-KEPFFSKKLLRLI--GILSTFRLQQHMKCIVFV 431
+E F +D +E L K P + L + IL F + + IVF+
Sbjct: 551 --DTERFLFNLFKDNKKE----LETLAKNPEYENDSLSKLRTKILHEFSSRDEARGIVFI 604
Query: 432 NRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNL 487
+A AL+ +I +N KF + +++G + +K M+ K +L+KF G++NL
Sbjct: 605 KTRRSAIALNQWIQENPKFADIGVKSAYVIGGGDQSVVKPMTSAEQKDVLKKFGKGQVNL 664
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-VDSGNQRELDL 546
L+AT V EEGLDI C VIR+ L + IQ++GR R S Y + V + E +
Sbjct: 665 LIATTVAEEGLDIPACNFVIRYGLVTNEIAMIQAQGRGRAEDSSYTLVEVKNSGVAEKEC 724
Query: 547 IKNFSKEEDRMNREI 561
+ + K + MN+ I
Sbjct: 725 VNEYRK--NMMNKAI 737
>gi|18402610|ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
gi|75274109|sp|Q9LTQ0.1|RTL2_ARATH RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2; AltName: Full=Ribonuclease three-like
protein 2
gi|9294562|dbj|BAB02825.1| unnamed protein product [Arabidopsis thaliana]
gi|332642855|gb|AEE76376.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
Length = 391
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 68/403 (16%)
Query: 1204 LPLSASLD-MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+P+S+ ++ M +E +L ++F ++ LL +A H S Y+RLEF+GD+ + I++
Sbjct: 51 VPVSSEMESMEAVEKILNYKFSNKSLLKEAITHTSCTDFPS-YERLEFIGDSAIGLAISN 109
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
YLY YP L+P L+ LR+ V+ + A V+++ Y FL ++ L E + + + +
Sbjct: 110 YLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSE-AVG 168
Query: 1323 PSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
V G + PKVL DL ES GA+ +D F+L +W I L+PI+ +LQ
Sbjct: 169 KEDDLSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQK 228
Query: 1381 --NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIR- 1437
P+ L +LC+ + + + K G +A V D ++ S A N K+ R
Sbjct: 229 QPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIA---VIYLDDELLASGRAEN---KDIARL 282
Query: 1438 IASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKIS 1497
IA+++ KL P+ +V +D+V
Sbjct: 283 IAAKEALRKLSEV----------------------------FPVEMVIDEDSV------- 307
Query: 1498 EPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFR 1557
+Q A+++L E+C W P + ++ K F
Sbjct: 308 ------------------EIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCS 349
Query: 1558 VIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
++I EK + G+ Q+K K A +A M+ L + YL
Sbjct: 350 AKIKI-TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +A+T C + S ERLE +GD+ + A+ +L+L + +++ +L+ R+ V+
Sbjct: 76 LLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEK 135
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L +++ + L ++R R P + K E S+ G+ DDL+
Sbjct: 136 LARVSLNHGLYSFLR-------------RNAPSLDEKVKE---FSEAVGKE-DDLS---- 174
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
S G K +AD+ E+L GA D F ++ + G+
Sbjct: 175 VSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGL 216
>gi|357462179|ref|XP_003601371.1| Ribonuclease 3-like protein [Medicago truncatula]
gi|355490419|gb|AES71622.1| Ribonuclease 3-like protein [Medicago truncatula]
Length = 322
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 112/195 (57%), Gaps = 8/195 (4%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
+E +LG++F ++ LL +A H ++ Y+RLE++GDAVL+ L+ + YP LKPG
Sbjct: 72 VEEILGYEFKNKQLLEEALTHTTYGAEND-YERLEYVGDAVLNLLMAREQFVSYPNLKPG 130
Query: 1275 QLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP- 1333
LT LRS V+++ A VA++ ++L L E ++ + + T+ +++ P
Sbjct: 131 ILTQLRSKNVDSEKLARVAINHGLDRYLRHKKPQLGEQVSLGIGIGQIEAFTKAIEDYPI 190
Query: 1334 ------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELL 1387
PK L D+VES++GA+ +D +L VWK+ L+PI++ + ++ +P+ EL
Sbjct: 191 HSNGHIHVPKDLADMVESTIGALFIDCDSSLEIVWKVFRKLLEPIIEPNTVEKHPVSELQ 250
Query: 1388 ELCNSYDLDLQFPSL 1402
E+C L+LQF L
Sbjct: 251 EVCQKKKLNLQFVDL 265
Score = 46.2 bits (108), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
+ ++L +ALT ERLE +GDA L + R F+ + + G LT+ RS V+
Sbjct: 82 NKQLLEEALTHTTYGAENDYERLEYVGDAVLNLLMAREQFVSYPNLKPGILTQLRSKNVD 141
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRI--CSKETER-TIHSQYDGRAPDD 1136
+ L ++A + L Y+R + + +LG +I +K E IHS P D
Sbjct: 142 SEKLARVAINHGLDRYLRHKKPQLGEQVSLGIGIGQIEAFTKAIEDYPIHSNGHIHVPKD 201
Query: 1137 LNAEVRCSKGHHWLHKKTIADVVEALVGA-FID 1168
L AD+VE+ +GA FID
Sbjct: 202 L------------------ADMVESTIGALFID 216
>gi|17511264|gb|AAK68755.2| Unknown protein [Arabidopsis thaliana]
gi|20148705|gb|AAM10243.1| unknown protein [Arabidopsis thaliana]
Length = 391
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 68/403 (16%)
Query: 1204 LPLSASLD-MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+P+S+ ++ M +E +L ++F ++ LL +A H S Y+RLEF+GD+ + I++
Sbjct: 51 VPVSSEMESMEAVEKILNYKFSNKSLLKEAVTHTSCTDFPS-YERLEFIGDSAIGLAISN 109
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
YLY YP L+P L+ LR+ V+ + A V+++ Y FL ++ L E + + + +
Sbjct: 110 YLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSE-AVG 168
Query: 1323 PSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
V G + PKVL DL ES GA+ +D F+L +W I L+PI+ +LQ
Sbjct: 169 KEDDLSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQK 228
Query: 1381 --NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIR- 1437
P+ L +LC+ + + + K G +A V D ++ S A N K+ R
Sbjct: 229 QPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIA---VIYLDDELLASGRAEN---KDIARL 282
Query: 1438 IASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKIS 1497
IA+++ KL P+ +V +D+V
Sbjct: 283 IAAKEALRKLSEV----------------------------FPVEMVIDEDSV------- 307
Query: 1498 EPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFR 1557
+Q A+++L E+C W P + ++ K F
Sbjct: 308 ------------------EIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCS 349
Query: 1558 VIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
++I EK + G+ Q+K K A +A M+ L + YL
Sbjct: 350 AKIKI-TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +A+T C + S ERLE +GD+ + A+ +L+L + +++ +L+ R+ V+
Sbjct: 76 LLKEAVTHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEK 135
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L +++ + L ++R R P + K E S+ G+ DDL+
Sbjct: 136 LARVSLNHGLYSFLR-------------RNAPSLDEKVKE---FSEAVGKE-DDLS---- 174
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
S G K +AD+ E+L GA D F ++ + G+
Sbjct: 175 VSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGL 216
>gi|15242329|ref|NP_199328.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
gi|75171238|sp|Q9FKF0.1|RTL3_ARATH RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3; AltName: Full=Ribonuclease three-like
protein 3
gi|9759600|dbj|BAB11388.1| unnamed protein product [Arabidopsis thaliana]
gi|332007827|gb|AED95210.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
Length = 957
Score = 119 bits (298), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 174/397 (43%), Gaps = 38/397 (9%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
+E +L + F+++ LL +A S + RLEF GD++L+ T+Y+ YP LK
Sbjct: 7 VEKILNYSFVNKTLLKEAITQKS-----PLFDRLEFFGDSILEVAFTNYICHTYPNLKVK 61
Query: 1275 QLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR 1334
+L DLR+ V+N+ FA +AV+ + + FL+ + L + + N+ + + +
Sbjct: 62 ELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYGGLVK 121
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYD 1394
PK+L D +ES + +D +++ +W+I S L+PI +L L P L L +
Sbjct: 122 APKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTL---FR 178
Query: 1395 LDLQFPSLKKGG--KFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGY 1452
L + S G K K+ ++KD + ++ I S +LFS +
Sbjct: 179 LADKHGSESTSGIRKMTTSTKILLRNKDCL--DVDLEDVKGKSFEICSTELFSLSTVS-- 234
Query: 1453 VPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFE-----KLKISEPQGGSSCDI 1507
E+ L E +I D + +FE KL+I Q GSS +
Sbjct: 235 -------ENSLTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQI---QTGSSGNP 284
Query: 1508 GSPSLTTGGL---------QNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRV 1558
+ +TT + + + R L E+C N W P F +E+G + F V
Sbjct: 285 LTYEMTTKQMVVDKDSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSV 344
Query: 1559 IVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLE 1595
+EI E G+ ++KKK A A M+ LE
Sbjct: 345 KIEIPNIEGTFHMKGDIKSKKKQAENSLAYHMIRALE 381
Score = 73.6 bits (179), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 17/250 (6%)
Query: 1204 LPLSASLD--MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLIT 1261
L S+ +D + +E +L + F+++ LL + H + +Q L F+G++ L T
Sbjct: 405 LLFSSEMDSSVEAVEKILNYSFVNKTLLKELLTHNN----SPLFQGLMFVGESALSLAFT 460
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+LY YP L+P L+ LR + +A VAV + Y+ I + ++++ M
Sbjct: 461 KHLYLTYPMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMG 520
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL- 1380
V + PK+L +L+ GA+ +D +N+ + +I L+PI +L++
Sbjct: 521 KEDDPYRVV---KAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQ 577
Query: 1381 --NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFI-SACATNLSRKEAIR 1437
P L L + + + F K GG A+V D+FI S CA + A
Sbjct: 578 LKQPFLMLFRLADKHGKQIDFRYSKDGGSRKNIAQVYM--DDMFIASGCAKRIDT--AKL 633
Query: 1438 IASQQLFSKL 1447
+A+++ KL
Sbjct: 634 LAAEEAIQKL 643
>gi|397520025|ref|XP_003830148.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1 [Pan
paniscus]
Length = 925
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 417 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 474
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 475 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 525
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 526 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 580
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 581 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 640
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 641 DALKNWIEGNPKLSFLKPSILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 700
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 701 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 758
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 759 KMMNDSILRLQTWD 772
>gi|355753280|gb|EHH57326.1| Putative ATP-dependent RNA helicase DDX58 [Macaca fascicularis]
Length = 925
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 241/553 (43%), Gaps = 68/553 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +AVL+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAKKGKNTIICAPTGCGKTLVAVLICEH--HLKKFPPGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQESVFSKYFERLGYRVTGISGATA---ENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
L I L LDA V + ++ E+LE V P ++ + S
Sbjct: 417 AKDTDEAL-DYICKLCASLDASVIATVKDNLEELEQVVYKP----QKFFRKVESRVSDKF 471
Query: 287 TCSEQLAEIKR--EQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
C +A++ R E + + L ++N T K + K C+
Sbjct: 472 KCI--IAQLMRDTESLAKRICKDLESFSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKD 529
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 530 EESRICKAL---FLYTSHLRKYNDALIISEHARVKDALDYLKDFFSNVRAA--GFDETEQ 584
Query: 393 DLS---------CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYI 443
DL+ V ++P S + +L + + + H+ V RAL
Sbjct: 585 DLTQRFEEKLQELESVSRDP--SNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDA 642
Query: 444 LQNLKFLASWRCHFLV-GVNAGLKSMSRN------AMKSILEKFR-SGELNLLVATKVGE 495
L+N + + HFL G+ G ++N A K ILE F+ +G+ N+L+AT V +
Sbjct: 643 LKNW-IEGNPKLHFLKPGILTGRGKTNQNTGMTLPAQKCILEAFKVNGDHNILIATSVAD 701
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 702 EGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KEK 759
Query: 556 RMNREIMDRTSSD 568
MN I+ + D
Sbjct: 760 MMNDCILHLQTWD 772
>gi|414879097|tpg|DAA56228.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 290
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 42/301 (13%)
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIF 218
+VM PQ+LL L F+ +++++L+IFDECHHA NHPY +IMK+FY K P +F
Sbjct: 1 MVMTPQVLLDALRQAFLILDMVSLMIFDECHHA--TGNHPYTRIMKEFYHGSEHK-PNVF 57
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGP 276
GMTASP++ KG S+ + ++ LEN+LD+K++SV D E++E V S V R Y+
Sbjct: 58 GMTASPIIRKGVSSDLDCKNQLSELENILDSKIHSVVDREEIELCVPSAKEVNRYYEPRT 117
Query: 277 VINDTSSSYVTCSEQLAEIKREQY----ISALSRKLHDHQSLRNTTKQ-LNRLHDSMK-- 329
V S+ SE+L EI +Y I +R + ++ TK+ RL +S+
Sbjct: 118 V------SFDDLSEEL-EILCSKYDGLIIQLHNRSTNQYKDADEITKESRKRLSNSLAKI 170
Query: 330 -FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCR-----FASQA------ 377
+CLE+ G+ A A+ I + + R ++ +T D + FA +
Sbjct: 171 CYCLEDAGLLCASEATKICI--ERGQRKGWLKGGSDTTDQQSGQNGPILFAEISMLHMEF 228
Query: 378 -SEVFAAICRR----DGI----ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCI 428
EV I +R GI S+ C+E + S KL L+ + +F +++C+
Sbjct: 229 FQEVLDIIGKRVQQQQGIDALLNSERGCVEAKNMGYISPKLYELMQVFLSFSDPDNVRCL 288
Query: 429 V 429
+
Sbjct: 289 I 289
>gi|359320815|ref|XP_003639433.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Canis
lupus familiaris]
Length = 923
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 237/533 (44%), Gaps = 85/533 (15%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A E +N I+ TGCGKT +A+L+ HL + P QK +F A +
Sbjct: 242 RNYQLELALPAKEGKNTIICAPTGCGKTFVALLICEH--HLKKFPQGQKGKIVFFAIQIP 299
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G+KV G + + E+ ++ +++V+ PQIL+ CL +
Sbjct: 300 VYEQQNSVFSKYFERLGYKVAGISGAT---SENISVEQIVENNDIIVLTPQILVNCLRNG 356
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ +HPY IM ++ + +P++ G+TAS +G
Sbjct: 357 TIPSLSVFTLMIFDECHNTS--KHHPYNMIMFNYLDQKLGGSSDPLPQVVGLTASVGIGD 414
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
+ + +L + + +V+D E+LE V P ++ + ++
Sbjct: 415 AKNTMEAMEYICKLCASLDTSVIATVKDNLEELEEIVYKP----QKFFRKVESRTTDRFK 470
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL----- 332
C ++++ RE +L++ + D L N ++ NR + K+ C+
Sbjct: 471 CI--ISQLMRE--TESLAKNIFDE--LENVSQIQNRNFGTQKYEQWIVSVQKACMVFQLP 524
Query: 333 ---ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA------ 383
E +C AL ++ S + LI E + D+L ++V AA
Sbjct: 525 NKDEESRICKAL---FLYTSHLRKYNDALIINEHARMKDALDYLKDFFTDVRAAGFDEIE 581
Query: 384 ----------ICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVN 432
+ + I+ DLS + P KL L IL + L + I+FV
Sbjct: 582 QHLTYRFEEKLQELESISMDLSN----ENP----KLKDLSFILQEEYHLNPESRTILFVK 633
Query: 433 RIVTARALSYILQNLKFLASWRCHFLVGV-----NAGLKSMSRNAMKSILEKFRS-GELN 486
AL ++ L+ + L G N G M+ A K L+ FR+ G+
Sbjct: 634 TRALVDALKKWIEENSELSFLKPGILTGRGKTNHNTG---MTLPAQKCALDAFRTDGDKK 690
Query: 487 LLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
+L+AT V +EG+DI C LVI ++ V IQ+RGR R S+ FL+ S
Sbjct: 691 ILIATSVADEGIDIAQCNLVILYEYVGNVIRMIQTRGRGRARGSK-CFLLTSN 742
>gi|347447734|pdb|3TMI|A Chain A, Structural Basis For Rna Recognition And Activation Of
Rig-I
Length = 695
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 14 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 71
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 72 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 128
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 129 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 186
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 187 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 244
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 245 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 295
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 296 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 350
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 351 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 410
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 411 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 470
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 471 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 528
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 529 KMMNDSILRLQTWD 542
>gi|27881482|ref|NP_055129.2| probable ATP-dependent RNA helicase DDX58 [Homo sapiens]
gi|114624048|ref|XP_001156662.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 4 [Pan
troglodytes]
gi|81170421|sp|O95786.2|DDX58_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
Full=DEAD box protein 58; AltName: Full=RIG-I-like
receptor 1; Short=RLR-1; AltName: Full=Retinoic
acid-inducible gene 1 protein; Short=RIG-1; AltName:
Full=Retinoic acid-inducible gene I protein; Short=RIG-I
gi|119578952|gb|EAW58548.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, isoform CRA_b [Homo
sapiens]
gi|124376888|gb|AAI32787.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Homo sapiens]
gi|168278056|dbj|BAG11006.1| ATP-dependent RNA helicase DDX58 [synthetic construct]
gi|187952415|gb|AAI36611.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Homo sapiens]
gi|410218244|gb|JAA06341.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pan troglodytes]
gi|410302632|gb|JAA29916.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pan troglodytes]
gi|410336301|gb|JAA37097.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pan troglodytes]
Length = 925
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 417 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 474
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 475 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 525
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 526 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 580
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 581 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 640
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 641 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 700
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 701 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 758
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 759 KMMNDSILRLQTWD 772
>gi|397520027|ref|XP_003830149.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2 [Pan
paniscus]
Length = 854
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 173 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 230
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 231 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 287
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 288 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 345
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 346 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 403
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 404 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 454
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 455 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 509
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 510 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 569
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 570 DALKNWIEGNPKLSFLKPSILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 629
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 630 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 687
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 688 KMMNDSILRLQTWD 701
>gi|47210542|emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1479
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 35/260 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSIC---IFLAPTVA 116
RKYQ+EL + A+E N IV L +G GKT IAVLL EL+H IR P +FL T A
Sbjct: 36 RKYQVELLEAALEHNTIVCLNSGSGKTFIAVLLTKELSHQIRGPYSGTAKRTVFLVNTAA 95
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD--WEKEIDQ------------------- 155
V +QA + +V + S+R + D W +EI +
Sbjct: 96 SVVEQAAAVRTHSDLQVGEY-SDSERTTTWTDQHWSREIAENQHSDGSSFSDRVSLRLSV 154
Query: 156 YEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVP 215
+VLVM I LY L + +++ I L++FD+CH A ++HPY +IMK Y I P
Sbjct: 155 KQVLVMTCHIFLYILTRKILRLSKINLVVFDDCHLA--IADHPYCEIMK--YFEGIASSP 210
Query: 216 RIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYG 275
RI G+TAS + GK ++L + I +LE L + + D L+ + S P V G
Sbjct: 211 RILGLTASILNGK--CDPSDLEEKIQNLERTLKSNAETATDLVVLDRYASQPREVVLDCG 268
Query: 276 PVINDTSSSYVTCSEQLAEI 295
P ++ + CS AE+
Sbjct: 269 PYLDRSG----LCSRLQAEL 284
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 550 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYIML 609
Query: 536 VDSGNQREL-DLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKV-------------- 580
DS + D + + E +I+ S + SE + +V
Sbjct: 610 ADSERTKAFEDDLTTYKAIE-----KILRNKCSKSVEVSEFEVEQVFDDDCIIPPYVLRS 664
Query: 581 DSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIHQI 639
+ G ++ + ++RYC++LP D F + PK + G + LP N+P+
Sbjct: 665 EDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVELQNGHFQSRLYLPINSPLRVP 724
Query: 640 VGTP-QSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
V P + + A+K L E LHK+G L+D+L+P
Sbjct: 725 VKGPIMNCVRLAEKAVALLCCEKLHKIGELDDHLMP 760
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1351 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1410
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1411 LYRLGKKKGLPSRMVVSIFDP 1431
Score = 45.4 bits (106), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1350 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1408
>gi|114624054|ref|XP_001156498.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2 [Pan
troglodytes]
gi|193785120|dbj|BAG54273.1| unnamed protein product [Homo sapiens]
Length = 854
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 173 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 230
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 231 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 287
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 288 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 345
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 346 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 403
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 404 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 454
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 455 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 509
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 510 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 569
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 570 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 629
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 630 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 687
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 688 KMMNDSILRLQTWD 701
>gi|111154107|ref|NP_001036133.1| probable ATP-dependent RNA helicase DDX58 [Macaca mulatta]
gi|110340386|gb|ABG67971.1| retinoic acid-inducible protein I [Macaca mulatta]
gi|380811238|gb|AFE77494.1| putative ATP-dependent RNA helicase DDX58 [Macaca mulatta]
gi|383412499|gb|AFH29463.1| putative ATP-dependent RNA helicase DDX58 [Macaca mulatta]
Length = 925
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 241/553 (43%), Gaps = 68/553 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +AVL+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAKKGKNTIICAPTGCGKTLVAVLICEH--HLKKFPPGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQESVFSKYFERLGYRVTGISGATA---ENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
L I L LDA V + ++ E+LE V P ++ + S
Sbjct: 417 AKDTDEAL-DYICKLCASLDASVIATVKDNLEELEQVVYKP----QKFFRKVESRVSDKF 471
Query: 287 TCSEQLAEIKR--EQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
C +A++ R E + + L ++N T K + K C+
Sbjct: 472 KCI--IAQLMRDTESLAKRICKDLESFSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKD 529
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 530 EESRICKAL---FLYTSHLRKYNDALIISEHARLKDALDYLKDFFSNVRAA--GFDETEQ 584
Query: 393 DLS---------CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYI 443
DL+ V ++P S + +L + + + H+ V RAL
Sbjct: 585 DLTQRFEEKLQELESVSRDP--SNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDA 642
Query: 444 LQNLKFLASWRCHFLV-GVNAGLKSMSRN------AMKSILEKFR-SGELNLLVATKVGE 495
L+N + + HFL G+ G ++N A K ILE F+ +G+ N+L+AT V +
Sbjct: 643 LKNW-IEGNPKLHFLKPGILTGRGKTNQNTGMTLPAQKCILEAFKVNGDHNILIATSVAD 701
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 702 EGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KEK 759
Query: 556 RMNREIMDRTSSD 568
MN I+ + D
Sbjct: 760 MMNDCILHLQTWD 772
>gi|355567708|gb|EHH24049.1| Putative ATP-dependent RNA helicase DDX58 [Macaca mulatta]
Length = 925
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 241/553 (43%), Gaps = 68/553 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +AVL+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAKKGKNTIICAPTGCGKTLVAVLICEH--HLKKFPPGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQESVFSKYFERLGYRVTGISGATA---ENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
L I L LDA V + ++ E+LE V P ++ + S
Sbjct: 417 AKDTDEAL-DYICKLCASLDASVIATVKDNLEELEQVVYKP----QKFFRKVESRVSDKF 471
Query: 287 TCSEQLAEIKR--EQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
C +A++ R E + + L ++N T K + K C+
Sbjct: 472 KCI--IAQLMRDTESLAKRICKDLESFSQIQNREFGTQKYEQWIVTVQKACMVFQMSDKD 529
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 530 EESRICKAL---FLYTSHLRKYNDALIISEHARLKDALDYLKDFFSNVRAA--GFDETEQ 584
Query: 393 DLS---------CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYI 443
DL+ V ++P S + +L + + + H+ V RAL
Sbjct: 585 DLTQRFEEKLQELESVSRDP--SNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDA 642
Query: 444 LQNLKFLASWRCHFLV-GVNAGLKSMSRN------AMKSILEKFR-SGELNLLVATKVGE 495
L+N + + HFL G+ G ++N A K ILE F+ +G+ N+L+AT V +
Sbjct: 643 LKNW-IEGNPKLHFLKPGILTGRGKTNQNTGMTLPAQKCILEAFKVNGDHNILIATSVAD 701
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 702 EGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KEK 759
Query: 556 RMNREIMDRTSSD 568
MN I+ + D
Sbjct: 760 MMNDCILHLQTWD 772
>gi|297684253|ref|XP_002819761.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2
[Pongo abelii]
Length = 925
Score = 118 bits (295), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 246/555 (44%), Gaps = 70/555 (12%)
Query: 59 ARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTV 115
+R YQLEL AM+ +N I+ TGCGKT +++L+ HL + PQ K +F A +
Sbjct: 243 SRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQI 300
Query: 116 ALVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 301 PVYEQQKSVFSKYFERHGYRVTGISGATA---ENVPVEQIVENNDIIILTPQILVNNLKK 357
Query: 173 RFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVG 227
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 358 GTIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVG 415
Query: 228 KGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L I L LDA V + + E+LE V P + I+DT Y
Sbjct: 416 DAKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDTFK-Y 473
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL--- 332
+ +A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 474 I-----IAQLMRD--TESLAKRIC--KDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQ 524
Query: 333 -----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR 387
E +C AL ++ S + LI E + D+L S V AA
Sbjct: 525 MPDKDEESRICKAL---FLYTSHLRKYNDALIINEHARMKDALDYLKDFFSNVRAA--GF 579
Query: 388 DGIASDLS---------CIEVLKEPFFSK-KLLRLIGILST-FRLQQHMKCIVFVNRIVT 436
D I DL+ V ++P KL L IL + L I+FV
Sbjct: 580 DEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRAL 639
Query: 437 ARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRS-GELNLLVATKV 493
AL ++ L+ + L G ++ M+ A K IL+ F++ G N+L+AT V
Sbjct: 640 VDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKANGNHNILIATSV 699
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE 553
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +
Sbjct: 700 ADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--K 757
Query: 554 EDRMNREIMDRTSSD 568
E MN I+ + D
Sbjct: 758 EKMMNDSILRLQTWD 772
>gi|148231712|ref|NP_001085915.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Xenopus laevis]
gi|49256146|gb|AAH73528.1| MGC82787 protein [Xenopus laevis]
Length = 682
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 229/527 (43%), Gaps = 88/527 (16%)
Query: 62 YQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQ E+ A+E +NII++L TG GKT A L + HL K +C+ + + Q
Sbjct: 6 YQWEVIGPALEGKNIIIWLPTGAGKTRAA--LYVAMRHLEMKRNAKVCLMVNKVHLVDQH 63
Query: 121 QAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH--RFIK 176
+ + +KV G ++ C + + + +V++ QIL L I
Sbjct: 64 FSNEFHPHLKDKYKVVAISGDTEH---KCFFAELVQNNDVIICTAQILQNALSSSSEEIH 120
Query: 177 MEL--IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM---KVPRIFGMTASPVVGKGAS 231
+EL LLI DECHH + Y K+M+ + + I K+P+I G+TASP G+ S
Sbjct: 121 VELTDFTLLIIDECHHTH--KDGVYNKLMEGYLERKITQKGKLPQILGLTASPGTGRATS 178
Query: 232 AQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSP----------------------V 268
+ + NL ++ S E EDLE+ P +
Sbjct: 179 FEKAEEHILQICANLDTWRIMSAEVHREDLEAKAKQPNKQYDLVTERPRDPFGDKLKELM 238
Query: 269 VRVYQYGPVINDTSSSYVT--CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHD 326
+++Y + S + T +++ E+++E + A K LR L +HD
Sbjct: 239 KTIHEYLRTTDFCESDFGTQLYEQKVVELEKEGAVEANRMKRTCALHLRKYNDSL-LVHD 297
Query: 327 SMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCR-FASQASEVFAAIC 385
+++ + +Y LL D + ++I + + D L + F + +
Sbjct: 298 TVR-----------MMDAYELLD-DYYQQEKVIRKQNDPTDAFLIQLFDGNRARLLE--- 342
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYIL 444
+A D+ F + KL +L IL F+ + I+F R ++ L
Sbjct: 343 ----LAQDVR--------FENPKLRKLEEILRDQFQFSSGSRGIIFTR----TRQSTHSL 386
Query: 445 QNLKFLASWRCHFLVGVN------AGL----KSMSRNAMKSILEKFRSGELNLLVATKVG 494
N +++S ++GV AG K M++N + +E FR G+LNLL++T V
Sbjct: 387 HN--WISSKHSFQIMGVKTAPLTGAGYSNQSKHMTQNEQRETIEMFRKGQLNLLISTSVA 444
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ 541
EEGLDI C +V+R+ L S +Q+RGRAR S Y+FL G +
Sbjct: 445 EEGLDIPQCNIVVRYGLMTNEISMVQARGRARHEDSCYSFLAKIGGK 491
>gi|260809266|ref|XP_002599427.1| hypothetical protein BRAFLDRAFT_249506 [Branchiostoma floridae]
gi|229284705|gb|EEN55439.1| hypothetical protein BRAFLDRAFT_249506 [Branchiostoma floridae]
Length = 672
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 229/521 (43%), Gaps = 66/521 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ+EL ++A++ N I+ TG GKT +A+ + + HL + +FL V LV
Sbjct: 2 RGYQMELAEQALQGRNTIICAPTGSGKTRVAIKITRD--HLEDVDARRRVVFLVNKVPLV 59
Query: 119 QQQAKVIEE--SIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
+QQ K E S + + G + + + + Y+V+++ Q+L L I
Sbjct: 60 EQQYKAFSEYLSPKYDILPLSGETA---ADIPVGETLPDYDVIILTAQVLENALRDELIS 116
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-----MKVPRIFGMTASPVVGKGAS 231
++ ++LIFDECHH Q N PY IM + K + + +P+I G+TAS VGK
Sbjct: 117 LDTFSMLIFDECHHCQ--KNDPYNAIMTRYIKQKVEMKSSISLPQIIGLTASLGVGKAKG 174
Query: 232 AQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT--- 287
+ + + + NL A + VE ++L + P V D + +
Sbjct: 175 QKEAVEHILGACANLDAAWISQVVEHKDELRKYNQKPDEEVKPVSGRSEDPFADMINMIM 234
Query: 288 -------CSEQLAEIKR------EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLEN 334
E+L ++ EQ++ L+RK ++ R ++ ++ ++ +
Sbjct: 235 EDIEGTLAIEELKPPRQREKQAYEQWVVTLARKGAILKNKR-VSRAIHAATTHLRKYFDA 293
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDL 394
L + L D+ + L EA + D+ L + ++A E R A+D
Sbjct: 294 LAINADARTKDALQYLDKFVTG-LQEAGFDETDEDLVKHFTEAKE------RLQEYAAD- 345
Query: 395 SCIEVLKEPFFSKKLLRL-IGILSTFRLQQHMKCIVFV-NRIVTARALSYILQ--NLKFL 450
E + + KL +L IL + + +C++F R +T L+++ + +L+ L
Sbjct: 346 -------EKYSNPKLDQLKYMILQAYEEKPDSRCLLFCKTRALTIALLTWMQEDPDLRKL 398
Query: 451 ASWRCHFLVGVNAGLKS---------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
R LVG A + M++N +LE F +G ++++T V EEG+DI
Sbjct: 399 NPGR---LVGAGASESTGGEQLVNHCMTQNQQVELLEMFTTGGNKIVISTSVAEEGIDIA 455
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV--DSGN 540
C V R+D +Q+RGR R S+ + + GN
Sbjct: 456 KCNFVFRYDYVGNEIGKVQTRGRGRAEGSKSVLIAGREGGN 496
>gi|328874858|gb|EGG23223.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
Length = 2645
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 139/547 (25%), Positives = 238/547 (43%), Gaps = 89/547 (16%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVL---LIYELAHLIRKP----QKSICIFLAPT 114
YQ E ++++ +N IV L TG GKT IAV+ ++Y+L +L ++ QK + +FL
Sbjct: 172 YQWESTRQSVPKNTIVVLPTGKGKTKIAVMVMKILYQLNNLKQEEKETYQKRMILFLTNK 231
Query: 115 VALVQQQAKVIEES---IGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
+ L +QQAK I++ + +RT G S + E QY+V+V I+ +
Sbjct: 232 IPLAEQQAKAIKQDCPDLKIHLRTGEGESGNIM-------EDRQYDVIVCTADIIRNWIG 284
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF------YKPDIMKV---PRIFGMTA 222
+ M+ L+I+DECHHA H + K+ ++ ++P I+ + P G
Sbjct: 285 YNMASMKDFYLVIYDECHHAT--GEHVFVKLAEEIKKLDREFQPRILGLTASPSTGGKDT 342
Query: 223 SPVVGKGASAQANL------PKSI---NSLENLLDAKVYSVEDAE-----DLESFVSSPV 268
S ++ + + N+ PKS+ N LE +++ VY E +++S ++
Sbjct: 343 SQIMKNIDALERNIGSTIFRPKSLPMENPLE--MESIVYQFTRQEIGTRKEIDSVLAEAT 400
Query: 269 VRVYQ----YGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRL 324
R+ P + +Y + + L +KL D+ +N + + +
Sbjct: 401 KRLCDELKFTDPNLRYNDQNYTSFYQGL-------------KKLDDYHRDQNPPR-MTSV 446
Query: 325 HDSMKFCLENL-GVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA 383
+ + L NL G+ +L S E ++ D L + + A +
Sbjct: 447 PSGLLYKLFNLIGILQVQGIQAVLTSIVEDLQM-----------DELDSYYTSAYMYYMK 495
Query: 384 ICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ-------HMKCIVFVNRIVT 436
++ G+ L P +S K L ++ F + ++ IVFV
Sbjct: 496 KIQK-GV---LDQFVGTNPPLYSSKYKALRDYINNFIEKSVANDTISDVRGIVFVKTRQG 551
Query: 437 ARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEE 496
L +L+ + VG + G MS I+E FR G+ LVAT V EE
Sbjct: 552 CSDLIKLLKKEPVNLHIKSKLFVG-HTGEDGMSTEKQNRIMESFRKGDCKFLVATSVLEE 610
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDR 556
G+D+Q C +VI FD + + IQ RGRAR ++A+L+ G E D IK+ K E
Sbjct: 611 GIDVQQCNMVISFDPDLNLRNMIQRRGRARSKDGKFAYLIKEG---ETDEIKSLEKNEIL 667
Query: 557 MNREIMD 563
M + I++
Sbjct: 668 MAKIILE 674
>gi|354459477|pdb|2YKG|A Chain A, Structural Insights Into Rna Recognition By Rig-I
Length = 696
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 245/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 15 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 72
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +Q V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 73 VYEQNKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 129
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 130 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 187
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 188 AKTTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 245
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 246 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 296
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 297 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 351
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 352 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 411
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 412 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 471
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 472 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 529
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 530 KMMNDSILRLQTWD 543
>gi|301785794|ref|XP_002928312.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
[Ailuropoda melanoleuca]
gi|281341395|gb|EFB16979.1| hypothetical protein PANDA_018227 [Ailuropoda melanoleuca]
Length = 928
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 248/552 (44%), Gaps = 73/552 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A E +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 242 RNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFAIQLP 299
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G+KV G + + S E+ ++ Y+++++ PQIL+ L
Sbjct: 300 VYEQQKSVFSKYFEKLGYKVAGVSGATSEIVSV---EEIVENYDIIILTPQILVNSLRKG 356
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
+ + + L+IFDECH+ +HPY IM ++ + +P++ G+TAS VG
Sbjct: 357 TVPSLSVFTLMIFDECHNT--GKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTAS--VGT 412
Query: 229 G-ASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
G A + I L LD V + ++ E+LE V P ++ + ++
Sbjct: 413 GDAKNTTEAMEYICKLCASLDTSVIATVKDNLEELEEIVYKP----QKFFRKVKLRTTDR 468
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQS---LRNTTKQLNRLHDSMKF----------CL 332
C ++++ RE +L++K+ D S L N + NR + K+ C+
Sbjct: 469 FKCI--ISQLMRE--TESLAKKIFDELSTVTLENVFQIQNRNFGTQKYEQWILSVQKTCI 524
Query: 333 --------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
E +C AL Y+ S + LI E + D+L + V AA
Sbjct: 525 LFQLPDKEEESRICKAL---YLYTSHLRKYNDALIINEHARMKDALDYLKDFFANVRAA- 580
Query: 385 CRRDGIASDLSCI--EVLKE--------PFFSKKLLRLIGILS-TFRLQQHMKCIVFVNR 433
D I L+ E L+E + KL L IL + L + I+FV
Sbjct: 581 -GFDEIEQHLTWRFEEKLRELESVSMDPGNENPKLQDLSFILQEEYHLNPESRTILFVKT 639
Query: 434 IVTARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRS-GELNLLVA 490
AL ++ L+ + L G ++ M+ A K L+ FR+ G+ +L+A
Sbjct: 640 RALVDALKKWIEENSELSFLKPGILTGRGKTNQNTGMTLPAQKCALDAFRTDGDKKILIA 699
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNF 550
T V +EG+DI C LVI ++ V IQ+RGR R S+ L + + E + I N
Sbjct: 700 TSVADEGIDIAQCNLVILYEYVGNVIRMIQTRGRGRARGSKCFLLTSNADVIEKEKI-NI 758
Query: 551 SKEEDRMNREIM 562
KE+ MN I+
Sbjct: 759 HKEK-MMNDSIL 769
>gi|449514052|ref|XP_002194560.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Taeniopygia
guttata]
Length = 927
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 236/523 (45%), Gaps = 70/523 (13%)
Query: 54 DPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
+PK+ AR YQ+EL + A++ +N ++ TG GKT +AVL+ I +K+ +FLA
Sbjct: 241 EPKK-ARSYQIELAQPAIDGKNTLICAPTGSGKTFVAVLICEHHFQNIPSGRKAKVVFLA 299
Query: 113 PTVALVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
+ + +QQ V E G+ V+ CG + ++ E I +++V+ PQIL+
Sbjct: 300 TKMPVYEQQKNVFRQHFERSGYFVQGICGET---VANISVENVIQDSDIIVLTPQILVNI 356
Query: 170 LYHRFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDF----YKPDIMKVPRIFGMTASP 224
+ + + + L+IFDECH+ NHPY +M + + ++P+I G+TAS
Sbjct: 357 MDKGILSSLSIFTLMIFDECHN--TAGNHPYNVLMTRYLDQKFDSSAKQLPQIVGLTASV 414
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVY--------QY 274
VG S + + + I +L + LD + S E+ +DL+ F + P + + ++
Sbjct: 415 GVGNAKSTKETV-EHICTLCSYLDIQAISTVRENKQDLQRFANKPEIHIRWVKMRAQNRF 473
Query: 275 GPVINDTSSSYVTCSEQLAEIKREQYISAL--SRKLHDHQSLRNTTK-QLNRLHDSMKFC 331
+I+ S ++ + I+ + + ++H + K +L +L D K
Sbjct: 474 ADIISGLMSETEVLMRKIYSVDTISQINKIYFGTQRYEHWIVSTQKKCRLLQLEDKEK-- 531
Query: 332 LENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
+C L +I + LI +E I+D+L +E F + ++G
Sbjct: 532 --ESSICRDL---FICTEHLRKFNDALIISEDARIEDALAYL----NEFFTNV--KNGPY 580
Query: 392 SDLSCIEVLKEPF---------FSK-------KLLRLIGILS-TFRLQQHMKCIVFVNRI 434
++L + L E F SK KL L IL + + I+F
Sbjct: 581 TELE--KQLTEKFQEIEQELTALSKDESNENPKLEELACILDEAYHYNPQTRTILFAKTR 638
Query: 435 VTARALSYILQNLKFLASWRCHFLVG-----VNAGLKSMSRNAMKSILEKFRSG-ELNLL 488
AL ++ L+ + ++G N G M+ K +L+ FR+ ++ LL
Sbjct: 639 ALVAALKKWVEANPLLSHIKPDVMMGKGRRDQNVG---MTLPMQKGVLDAFRNDKDIRLL 695
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
+AT V +EG+DI C LV+ ++ V IQ RGR R S+
Sbjct: 696 IATSVADEGIDITECNLVVLYEYFGNVTKMIQVRGRGRAKDSK 738
>gi|119578951|gb|EAW58547.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, isoform CRA_a [Homo
sapiens]
Length = 703
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 236/525 (44%), Gaps = 69/525 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 199 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 256
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 257 VYEQQKSVFSKYFERHGYRVTGISGATAE---NVPVEQIVENNDIIILTPQILVNNLKKG 313
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 314 TIPSLSIFTLMIFDECHNT--SKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 371
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 372 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 429
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 430 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 480
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 481 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 535
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 536 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 595
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 596 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 655
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
+EG+DI C LVI ++ V IQ+RGR R S+ FL+ S
Sbjct: 656 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK-CFLLTSN 699
>gi|66813222|ref|XP_640790.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60468778|gb|EAL66778.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2285
Score = 116 bits (291), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 231/531 (43%), Gaps = 50/531 (9%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI-RKPQKSICIFLAPTVALV 118
R+YQ + + + N I+ L TG GKT +++L ++ + +K + +FL + L
Sbjct: 21 RQYQEDAFNQCISRNTILVLPTGTGKTLVSILTFLKMFEINEKKNNDKVALFLVNNILLG 80
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+QQ + I+ +V G ++ + Y+++V PQIL+ + I+++
Sbjct: 81 KQQTETIKNLTDKRVMVLSGDD------LSFQTKKKNYDIVVATPQILMNLINKNKIRID 134
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
+IFDE H+A N Y KIM D PRI G+TAS +
Sbjct: 135 NFHFIIFDEVHNATGLDN--YCKIMSLVKNLDPPFRPRILGLTASVLKNASNYTTERATN 192
Query: 239 SINSLENLLDAKVYS--VEDAED----------LESFVSSPVVRVYQYGPVINDT----- 281
I LE+++ +K+Y +E +D SP +Y+ P I T
Sbjct: 193 EIKKLEDIMLSKIYCPLIEIFKDQQQQQQQQQQQHHHHQSPNFEIYE--PSIQQTKLTSI 250
Query: 282 -------SSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLEN 334
+ Y++ ++K EQ + + + QSL + +L DS ++
Sbjct: 251 ISKLIIDKTRYLSKKNGHKDVKLEQIELPILKFI---QSLSSLKPKLTSERDSSEYATI- 306
Query: 335 LGVCGALHASYILLSGDETMRNELIEAEGN-TIDDSLCRFASQASEVFAAICRRDGIASD 393
+ +C +L + + + G + + + N I L + S+ ++ + +
Sbjct: 307 VNLCNSL--TTLSIEGPQQCLTSITDGFVNGIIYQQLIDYDSEENQQQQEEEEEEEKEDE 364
Query: 394 LSCIEVLKEPFFSKKLLRLIGI-LSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
IE+ F K LL+L+ I + + + CIVFV T + L +L + K ++
Sbjct: 365 DDGIEMKTNKF--KSLLKLLSIEIKENNINDKINCIVFVETRDTGKKLLNLLISEKEISK 422
Query: 453 WRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
+ G N G M + + I+++F+ G +LV+T V EEG+DI+ C VI FD
Sbjct: 423 LNPKLIYGHN-GRNGMKHSEQQQIIQQFKEGVCQVLVSTNVLEEGIDIKECNSVICFDNL 481
Query: 513 ETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMD 563
++ S IQ RGR R S L R DLIK+ E +NR ++D
Sbjct: 482 YSLKSLIQRRGRDRTCSSFTLILEQDQRLRLEDLIKS----EIIINRSLID 528
>gi|57997555|emb|CAI46068.1| hypothetical protein [Homo sapiens]
Length = 703
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 231/521 (44%), Gaps = 61/521 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 199 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 256
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 257 VYEQQKSVFSKYFERHGYRVTGISGATAE---NVPVEQIVENNDIIILTPQILVNNLKKG 313
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 314 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 371
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 372 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 429
Query: 287 TCSEQLAEIKR--EQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+A++ R E + + L + ++N T K + K C+
Sbjct: 430 -----IAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKD 484
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E +C AL ++ S + LI +E + D+L S V AA D I
Sbjct: 485 EESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFDEIEQ 539
Query: 393 DLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALS 441
DL+ V ++P KL L IL + L I+FV AL
Sbjct: 540 DLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALK 599
Query: 442 YILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGL 498
++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V +EG+
Sbjct: 600 NWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGI 659
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
DI C LVI ++ V IQ+RGR R S+ FL+ S
Sbjct: 660 DIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK-CFLLTSN 699
>gi|317039132|gb|ADU87114.1| melanoma differentiation-associated protein 5 [Paralichthys
olivaceus]
gi|321265893|gb|ADW78349.1| melanoma differentiation-associated protein 5 [Paralichthys
olivaceus]
Length = 988
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 230/541 (42%), Gaps = 99/541 (18%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRK---PQKSICIFLAPTV 115
R YQ+E+ + A+E +NII+ L TG GKT +AV + E HL R+ Q + L V
Sbjct: 291 RDYQMEVARPALEAKNIIICLPTGSGKTRVAVYITKE--HLDRRRAEGQPGKVVMLVNKV 348
Query: 116 ALVQQQAKVIEESIGF-----KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
LV+Q E + F KV G + S + K+ D V++ QIL L
Sbjct: 349 PLVEQHYSA--EFLPFLKPKYKVERVSGDCQLKISFTEILKKND---VIICTAQILENHL 403
Query: 171 YH------RFIKMELIALLIFDECHHAQ------------VKSNHPYAKIMKDFYKPDIM 212
+K+ + L+I DECHH Q +K H K K+ +P M
Sbjct: 404 ERSNKEEDEGVKLSDLTLIIIDECHHTQKGEVYNHIMMRYLKQKHKNIKWKKEQREP--M 461
Query: 213 KVPRIFGMTASPVVGKGASAQ----------ANLPKSINSLENLLDAKVYSVEDAEDLES 262
+P+I G+TASP VG + + ANL S +L D K + +E
Sbjct: 462 PLPQILGLTASPGVGGAKNMKKAVEHILRICANLDASSIMTSSLGDYKKQPNKTTLAVED 521
Query: 263 FVSSPVVRVYQYGPVINDT-----SSSYVTCSEQLAEIKREQYISALSRKL---HDH--- 311
+ P +G VI + + ++ + L + EQ+I R+ DH
Sbjct: 522 RIEDP------FGDVIKKIMNAIHAHAKLSTNCDLGSQRYEQWIVETEREAAAKEDHKVR 575
Query: 312 ---QSLRNTTKQLN-----RLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEG 363
+ LR ++ LN R+HD+ F E ++ DE + ++ + E
Sbjct: 576 VCAEYLRQYSEGLNLSNIIRMHDAFGFLNEYYE-----KEKNKKMNPDEEHKIQITDTE- 629
Query: 364 NTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQ 423
RF +F L+ + SK LR IL F ++
Sbjct: 630 --------RF------LFNVFKENKEELQSLAGNPQYENDSLSK--LRC-KILHEFSSRE 672
Query: 424 HMKCIVFVNRIVTARALSYILQ-NLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSILEK 479
+ I+F +A ALS+ +Q N KF + +++G + +K M+ K +L+
Sbjct: 673 EARGIIFTKTRRSAIALSHWIQENSKFADIGVKASYVIGGGDQSVVKPMTPAEQKDVLKN 732
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
F +G++NLL+AT V EEGLDI C VIR+ L S IQ+ GR R S Y LVD
Sbjct: 733 FHNGDVNLLIATTVAEEGLDIPACNFVIRYGLVTNEISMIQAEGRGRAEDSSYT-LVDVK 791
Query: 540 N 540
N
Sbjct: 792 N 792
>gi|260809268|ref|XP_002599428.1| hypothetical protein BRAFLDRAFT_249510 [Branchiostoma floridae]
gi|229284706|gb|EEN55440.1| hypothetical protein BRAFLDRAFT_249510 [Branchiostoma floridae]
Length = 613
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 222/515 (43%), Gaps = 57/515 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLI---YELAHLIRKPQKSICIFLAPTV 115
R YQ+EL + A+E N I+ TG GKT +A+ + E+ + ++ +FL +
Sbjct: 22 RGYQMELAEPALEGRNTIICAPTGSGKTRVAIKITRDHLEVGAGVEARRR--VVFLVNKM 79
Query: 116 ALVQQQAKVIEE--SIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
LV+QQ E S + + G + + + + Y+V+++ Q+L L
Sbjct: 80 PLVEQQCNAFREYLSPKYDILPLSGETT---ADIPVGETLPDYDVIILTAQVLENALRDE 136
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-----MKVPRIFGMTASPVVGK 228
I ++ ++LIFDECHH Q N PY IM + K + + +P+I G+TAS VGK
Sbjct: 137 LITLDTFSMLIFDECHHCQ--KNDPYNAIMTRYIKQKVERKSSISLPQIIGLTASLGVGK 194
Query: 229 GASAQANLPKSINSLENLLDAKVYS--VEDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ + + + N LDA+ S VE E+L+ + P V PV + +
Sbjct: 195 AKGQKEAVEHILRACAN-LDAEWISQVVEHKEELQKYNQKPDEEV---KPVSGRSEDPFA 250
Query: 287 TCSEQLAE-IKREQYISALSR--KLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHA 343
+ E I++ I A + + Q+ L R +++ + V A+HA
Sbjct: 251 DMINMIMEDIEKTLAIEADLKPPSQREKQAYEQWVVNLARKGATLR----DKKVSRAIHA 306
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGI-ASDLSCI----- 397
+ L + I A+ T D A Q E F +++G +D+ +
Sbjct: 307 ATTHLR--KYFDALAINADARTKD------ALQYLEKFVTGLQKEGFDGTDVDLVKHFTE 358
Query: 398 ------EVLKEPFFSKKLLRLIG--ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
E +P +S L + IL + + +C++F AL +Q +
Sbjct: 359 AKERLQECAADPKYSNPKLDQLKYMILQAYEEKPDSRCLLFCKTRALTIALLTWMQEDQA 418
Query: 450 LASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
L LVG A + M++N +LE F +G ++++T V EEG+DI C V
Sbjct: 419 LRKLNPGRLVGAGASESTGGMTQNQQVELLELFTTGGHKIVISTSVAEEGIDIAKCNFVF 478
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLV--DSGN 540
R+D +Q+RGR R S+ + + GN
Sbjct: 479 RYDYVGNEIGKVQTRGRGRAEGSKSVLIAGREGGN 513
>gi|4405795|gb|AAD19826.1| RNA helicase [Homo sapiens]
Length = 925
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 417 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 474
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 475 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 525
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA +
Sbjct: 526 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFE 580
Query: 389 GIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P KL L IL + L I+FV
Sbjct: 581 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 640
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 641 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 700
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 701 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 758
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 759 KMMNDSILRLQTWD 772
>gi|407943766|pdb|4AY2|A Chain A, Capturing 5' Tri-Phosphorylated Rna Duplex By Rig-I
Length = 687
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 246/554 (44%), Gaps = 70/554 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 6 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 63
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +Q V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 64 VYEQNKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 120
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 121 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 178
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 179 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 236
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 237 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 287
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 288 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 342
Query: 389 GIASDLS---------CIEVLKEPFF-SKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P + KL L IL + L I+FV
Sbjct: 343 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 402
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 403 DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 462
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + E + I + +E
Sbjct: 463 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KE 520
Query: 555 DRMNREIMDRTSSD 568
MN I+ + D
Sbjct: 521 KMMNDSILRLQTWD 534
>gi|354459713|pdb|3TBK|A Chain A, Mouse Rig-I Atpase Domain
Length = 555
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 230/520 (44%), Gaps = 56/520 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 6 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 63
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 64 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 120
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L IFDECH+ NHPY +I + + + +P++ G+TAS VG
Sbjct: 121 AIPSLSVFTLXIFDECHNTS--KNHPYNQIXFRYLDHKLGESRDPLPQVVGLTASVGVGD 178
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 179 AKTAE-EAXQHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 232
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 233 FKCIISQLXK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQXADKE 291
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E D+L + +V A
Sbjct: 292 EESRVCKAL---FLYTSHLRKYNDALIISEDAQXTDALNYLKAFFHDVREAAFDETEREL 348
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 349 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 408
Query: 444 LQNLKFLASWRCHFLVGVNAGLKSMSRN--AMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 409 IEENPALSFLKPGILTGRGRTNRATGXTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 468
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
C LVI ++ V IQ+RGR R S+ L S +
Sbjct: 469 AECNLVILYEYVGNVIKXIQTRGRGRARDSKCFLLTSSAD 508
>gi|432110823|gb|ELK34300.1| Putative ATP-dependent RNA helicase DDX58 [Myotis davidii]
Length = 883
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 151/566 (26%), Positives = 255/566 (45%), Gaps = 66/566 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL + A+E +N I+ TGCGKT +A+L+ HL + P QK +F A +
Sbjct: 197 RNYQLELARPALEGKNTIICAPTGCGKTFVALLICEH--HLQKFPPGQKGKIVFFANQLP 254
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ VI E G+K+ G + + E+ ++ +++++ PQIL+ L +
Sbjct: 255 VYEQQKSVILKYFERHGYKIAGISGAT---VENISVEQIVENNDIIILTPQILVNSLKNG 311
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM + + +P++ G+TAS VG
Sbjct: 312 TIPSLSVFTLMIFDECHNTS--KLHPYNVIMFHYLDQKLGGSSDPLPQVIGLTASVGVG- 368
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
A + I L LD V + ++ E+LE + P ++ + +++
Sbjct: 369 DAKNTTEATEYICKLCASLDTSVVATVKDNLEELEGIIYKP----QKFFRKVKSRTTNRF 424
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQ---SLRNTTKQLNRLHDSMKFCLENLGV---CGA 340
C ++E+ +E +L++ + SL N ++ NR + K+ + V C
Sbjct: 425 KCI--ISELMKE--TESLAKSIFGELGTISLENLSQIQNRNFGTQKYEQWIVAVQKKCAV 480
Query: 341 LH------------ASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
LH A ++ S + L+ E D+L S V +A D
Sbjct: 481 LHLPDKEKESRICTALFLYTSHLRKFNDALLINEHARTKDALDYLKDFFSNVRSA--GFD 538
Query: 389 GIASDLS--CIEVLKE--------PFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ E L+E + KL L IL + L + I+FV
Sbjct: 539 EIEQDLTRRFEEKLQELESISMDPSNENPKLKDLCFILQEEYHLNPETRTILFVKTRALV 598
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K +L+ FR SG+ +L+AT V
Sbjct: 599 DALKKWIEENSKLSFLKPDILTGRGKTSQNIGMTLPAQKCVLDAFRASGDKKILIATSVA 658
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEE 554
+EG+DI C LVI ++ V IQ+RGR R S+ L + + E + I + +E
Sbjct: 659 DEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTTNDDVIEKEKINIY--KE 716
Query: 555 DRMNREIMDRTSSDAFTCSEERIYKV 580
MN I+ + D T +++I+++
Sbjct: 717 KMMNDSILSLQAWDE-TVFKKKIHQI 741
>gi|217069801|gb|ACA61272.1| retinoic acid inducible protein I [Anas platyrhynchos]
gi|388897634|gb|AFK82315.1| retinoic acid inducible protein I [Anas platyrhynchos]
Length = 933
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 237/512 (46%), Gaps = 58/512 (11%)
Query: 59 ARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
AR YQ+EL + A+ +N ++ TG GKT +++L+ + +K+ +FLA V +
Sbjct: 246 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 305
Query: 118 VQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-R 173
+QQ V + E G+ V+ G + S+ EK I+ +++V+ PQIL+
Sbjct: 306 YEQQKNVFKHHFERQGYSVQGISGEN---FSNVSVEKVIEDSDIIVVTPQILVNSFEDGT 362
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ NHPY +M + + ++P+I G+TAS VG
Sbjct: 363 LTSLSIFTLMIFDECHN--TTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAK 420
Query: 231 SAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT- 287
+ + + + I SL + LD + S E+ ++L+ F++ P + V I++ ++ ++
Sbjct: 421 NIEETI-EHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISN 479
Query: 288 -CSEQLAEIKREQYISALSR--------KLHDHQSLRNTTK-QLNRLHDSMKFCLENLGV 337
SE A ++ + LS+ + ++H + K +L +L D E +
Sbjct: 480 LMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKE----EESRI 535
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG----IASD 393
C AL +I + LI +E I D+L S +E F + ++G +
Sbjct: 536 CRAL---FICTEHLRKYNDALIISEDARIIDAL----SYLTEFFTNV--KNGPYTELEQH 586
Query: 394 LSCIEVLKEPFF----------SKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSY 442
L+ KEP + KL L+ IL +R + ++F AL
Sbjct: 587 LTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKK 646
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELN-LLVATKVGEEGLD 499
++ L + L+G ++ M+ + K +L+ F++ + N LL+AT V +EG+D
Sbjct: 647 CMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGID 706
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
I C LV+ ++ V IQ RGR R S+
Sbjct: 707 IVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 738
>gi|255638997|gb|ACU19799.1| unknown [Glycine max]
Length = 168
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 93/162 (57%), Gaps = 31/162 (19%)
Query: 1470 EARLIGYDETPINVVAADDNVF---EKLKISEPQ---GGSSCDIGSP----------SLT 1513
E +LIGYDETPI+V + ++ + S P+ + +I SP S
Sbjct: 2 EPKLIGYDETPIDVTDTNKHIVVNADPYNKSNPEIRPMQETDEICSPCVKPFSQRLQSSA 61
Query: 1514 TGGL----QNR----------SARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVI 1559
G L +NR +ARSRLYELCA+ CWKPP+F+CCK EG HLK FT +V
Sbjct: 62 KGKLSQIFENRDCSSDLSGTGTARSRLYELCASYCWKPPSFECCKAEGPDHLKQFTCKVT 121
Query: 1560 VEIEAPEK-IIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+EIE + I+E +GEP +KKK AAE AAEG W L+ EGYL
Sbjct: 122 LEIEEAQNLILEFVGEPLSKKKDAAESAAEGAFWYLQHEGYL 163
>gi|448433353|ref|ZP_21585874.1| Hef nuclease [Halorubrum tebenquichense DSM 14210]
gi|445686366|gb|ELZ38690.1| Hef nuclease [Halorubrum tebenquichense DSM 14210]
Length = 842
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 220/500 (44%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSIPDEEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
I R+ ++ +L +SL NTT K LN++ +K ++N G +
Sbjct: 227 AI-RDALNEVITDRLEKLKSLGVTNTTNPDLSQKDLNKMRGKLKKMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGIDGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKDGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|353251998|pdb|4A2Q|A Chain A, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353251999|pdb|4A2Q|B Chain B, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353252000|pdb|4A2Q|D Chain D, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
gi|353252001|pdb|4A2Q|E Chain E, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
Length = 797
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 237/512 (46%), Gaps = 58/512 (11%)
Query: 59 ARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
AR YQ+EL + A+ +N ++ TG GKT +++L+ + +K+ +FLA V +
Sbjct: 249 ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPV 308
Query: 118 VQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-R 173
+QQ V + E G+ V+ G + S+ EK I+ +++V+ PQIL+
Sbjct: 309 YEQQKNVFKHHFERQGYSVQGISGEN---FSNVSVEKVIEDSDIIVVTPQILVNSFEDGT 365
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ NHPY +M + + ++P+I G+TAS VG
Sbjct: 366 LTSLSIFTLMIFDECHN--TTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGNAK 423
Query: 231 SAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT- 287
+ + + + I SL + LD + S E+ ++L+ F++ P + V I++ ++ ++
Sbjct: 424 NIEETI-EHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISN 482
Query: 288 -CSEQLAEIKREQYISALSR--------KLHDHQSLRNTTK-QLNRLHDSMKFCLENLGV 337
SE A ++ + LS+ + ++H + K +L +L D E +
Sbjct: 483 LMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLEDKE----EESRI 538
Query: 338 CGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG----IASD 393
C AL +I + LI +E I D+L S +E F + ++G +
Sbjct: 539 CRAL---FICTEHLRKYNDALIISEDARIIDAL----SYLTEFFTNV--KNGPYTELEQH 589
Query: 394 LSCIEVLKEPFF----------SKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSY 442
L+ KEP + KL L+ IL +R + ++F AL
Sbjct: 590 LTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKK 649
Query: 443 ILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELN-LLVATKVGEEGLD 499
++ L + L+G ++ M+ + K +L+ F++ + N LL+AT V +EG+D
Sbjct: 650 CMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRLLIATSVADEGID 709
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
I C LV+ ++ V IQ RGR R S+
Sbjct: 710 IVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 741
>gi|353251997|pdb|4A2P|A Chain A, Structure Of Duck Rig-I Helicase Domain
gi|353252013|pdb|4A36|A Chain A, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
gi|353252014|pdb|4A36|B Chain B, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
Length = 556
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 242/524 (46%), Gaps = 63/524 (12%)
Query: 47 GAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK 105
GA +T K AR YQ+EL + A+ +N ++ TG GKT +++L+ + +K
Sbjct: 1 GAMETKK-----ARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRK 55
Query: 106 SICIFLAPTVALVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMI 162
+ +FLA V + +QQ V + E G+ V+ G + S+ EK I+ +++V+
Sbjct: 56 AKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGEN---FSNVSVEKVIEDSDIIVVT 112
Query: 163 PQILLYCLYH-RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIF 218
PQIL+ + + L+IFDECH+ NHPY +M + + ++P+I
Sbjct: 113 PQILVNSFEDGTLTSLSIFTLMIFDECHNT--TGNHPYNVLMTRYLEQKFNSASQLPQIL 170
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGP 276
G+TAS VG + + + + I SL + LD + S E+ ++L+ F++ P + V
Sbjct: 171 GLTASVGVGNAKNIEETI-EHICSLCSYLDIQAISTVRENIQELQRFMNKPEIDVRLVKR 229
Query: 277 VINDTSSSYVT--CSEQLAEIKREQYISALSR--------KLHDHQSLRNTTK-QLNRLH 325
I++ ++ ++ SE A ++ + LS+ + ++H + K +L +L
Sbjct: 230 RIHNPFAAIISNLMSETEALMRTIYSVDTLSQNSKKDFGTQNYEHWIVVTQRKCRLLQLE 289
Query: 326 DSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC 385
D E +C AL +I + LI +E I D+L S +E F +
Sbjct: 290 DKE----EESRICRAL---FICTEHLRKYNDALIISEDARIIDAL----SYLTEFFTNV- 337
Query: 386 RRDG----IASDLSCIEVLKEPFF----------SKKLLRLIGIL-STFRLQQHMKCIVF 430
++G + L+ KEP + KL L+ IL +R + ++F
Sbjct: 338 -KNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLF 396
Query: 431 VNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELN-L 487
AL ++ L + L+G ++ M+ + K +L+ F++ + N L
Sbjct: 397 AKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQTTGMTLPSQKGVLDAFKTSKDNRL 456
Query: 488 LVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
L+AT V +EG+DI C LV+ ++ V IQ RGR R S+
Sbjct: 457 LIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK 500
>gi|334303056|gb|AEG75816.1| retinoic acid inducible protein I [Anser anser]
Length = 933
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 240/541 (44%), Gaps = 57/541 (10%)
Query: 59 ARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
AR YQ+EL + A+ +N ++ TG G+T IA+L+ + +K +FLA V +
Sbjct: 245 ARSYQIELAQPAINGKNALICAPTGSGRTFIALLVCEHQFQNMPAGRKGKVVFLATKVPV 304
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-RFIK 176
+QQ V ++ + + G S S+ E I+ +++V+ PQIL+
Sbjct: 305 YEQQKNVFKQHFERQGYSIQGVSGENFSNVSVENVIEDNDIIVLTPQILVNSFEDGTLTS 364
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDF----YKPDIMKVPRIFGMTASPVVGKGASA 232
+ + L+IFDECH+ NHPY +M + + ++P+I G+TAS VG +
Sbjct: 365 LSVFTLMIFDECHN--TTGNHPYNVLMTRYLEQKFNSPASQLPQILGLTASVGVGNAKNI 422
Query: 233 QANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVV-------RVY-QYGPVINDTS 282
+ + + I SL + LD + S E+ +DL+ F++ P + RV+ + +I+D
Sbjct: 423 EETI-EHICSLCSYLDIQAISTVRENIQDLQRFMNKPEIDVRLVKRRVHNHFAVIISDLM 481
Query: 283 SSYVTCSEQLAEIKREQYISALSRK-----LHDHQSLRNTTK-QLNRLHDSMKFCLENLG 336
S ++ + +S SRK ++H + K +L +L D E
Sbjct: 482 SETEALMRKIYSVGT---VSQNSRKDFGTQKYEHWIVVTQRKCRLLQLEDKE----EESR 534
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCR------------FASQASEVFAAI 384
+C AL +I + LI +E I D+L +A + A
Sbjct: 535 ICRAL---FICAEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYAELEQHLTAKF 591
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYI 443
++ + LS E + P KL L IL +R + ++F AL
Sbjct: 592 QEKEPELTALSKDETNENP----KLEELACILDDAYRYNPQTRTLLFAKARALVAALKKC 647
Query: 444 LQNLKFLASWRCHFLVGVNAGLK--SMSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L+G + M+ + K +L+ F+ S + LL+AT V +EG+DI
Sbjct: 648 MEENPILSYIKPDVLMGRGRRDQKTGMTLPSQKGVLDAFKTSKDSRLLIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE 560
C LV+ ++ V IQ RGR R S+ LV S + + N KEE MN+
Sbjct: 708 AQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK-CILVTSKTEVVENEKCNRYKEE-MMNKA 765
Query: 561 I 561
I
Sbjct: 766 I 766
>gi|365824229|gb|AEX01716.1| melanoma differentiation associated protein-5 [Epinephelus
coioides]
Length = 982
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 230/524 (43%), Gaps = 70/524 (13%)
Query: 58 IARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTV 115
+ R YQ+E+ + A+E +NII+ L TG GKT +AV + + L + + + L V
Sbjct: 284 VLRDYQMEVARPALEGKNIIICLPTGSGKTRVAVYITKHHLDSRRAEGRSGKVVVLVNKV 343
Query: 116 ALVQQQ-----AKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
LV+Q ++ S +KV G S+ S + K D V++ QIL L
Sbjct: 344 PLVEQHFSAEFCPFLKPS--YKVERVSGDSQLKISFTEIVKNND---VIICTAQILENYL 398
Query: 171 YHRF------IKMELIALLIFDECHHAQ------------VKSNHPYAKIMKDFYKPDIM 212
+ + ++L++ DECHH Q +K H ++ K+ +P +
Sbjct: 399 ERSITGEDDGVNLSDLSLIVIDECHHTQKGGVYNHIMMRYLKQKHKNKRLKKEQKEP--V 456
Query: 213 KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA-KV-------YSVEDAEDLESFV 264
+P+I G+TASP VG GA+ A + I + LDA K+ Y E + +ES
Sbjct: 457 PIPQILGLTASPGVG-GATKMAKAEEHILRICANLDAVKIMTRSLGEYKKEPRKIIESIE 515
Query: 265 SSPVVRVYQYGPVINDT-----SSSYVTCSEQLAEIKREQYISALSR--KLHDHQSLRNT 317
+ +G VI + + + ++ + + EQ++ R ++Q +R
Sbjct: 516 DR---KEDPFGNVIKNIMNAIHAHAELSPTSEPGSQNYEQWVVQKERIAATEENQKVRAC 572
Query: 318 TKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQA 377
T+ L + + E L +C + +E E I+ + D+ +
Sbjct: 573 TEHLRQYN-------EGLNLCNTIRMRDAFSFLNE-YHQEQIKQKTTPDDEETIQITDTE 624
Query: 378 SEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIG--ILSTFRLQQHMKCIVFVNRIV 435
+F+ L+ + P F L + IL F ++ + I+F
Sbjct: 625 RFLFSLFKENKEELQRLA-----EHPEFENDSLTKLKSKILYEFSSREAARGIIFTKTRR 679
Query: 436 TARALS-YILQNLKF--LASWRCHFLVGVNAGL-KSMSRNAMKSILEKFRSGELNLLVAT 491
+A ALS +I +N KF + H + G + + K M+ + +L KF SG +NLL+AT
Sbjct: 680 SAIALSQWIQENPKFADIGVKASHVIGGGDQSVVKPMTAAEQREVLSKFHSGRVNLLIAT 739
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
V EEGLDI C VIR+ L + IQ+RGRAR S Y+ +
Sbjct: 740 TVAEEGLDIAACNFVIRYGLVTNEIAMIQARGRARAEDSSYSLV 783
>gi|448535918|ref|ZP_21622302.1| Hef nuclease [Halorubrum hochstenium ATCC 700873]
gi|445702727|gb|ELZ54668.1| Hef nuclease [Halorubrum hochstenium ATCC 700873]
Length = 821
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 220/500 (44%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ +V F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSIPDDEVVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
I R+ ++ +L +SL NTT K LN + +K ++N G +
Sbjct: 227 AI-RDALNEVITDRLEKLKSLGVTNTTNPDLSQKDLNAMRGKLKKMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINEGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKDGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|224116530|ref|XP_002317324.1| predicted protein [Populus trichocarpa]
gi|222860389|gb|EEE97936.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 5/208 (2%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
+E +L ++F ++ L +A H S+ YQR+EFLGDA L +++Y+Y YP+L P
Sbjct: 7 AVEKILNYKFKNKRHLEEALTHSSYTD-SASYQRMEFLGDAALGLALSNYVYLAYPQLDP 65
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
G L+ LR+ ++ + A VA+ Y+F+ ++ L + + + D + + G
Sbjct: 66 GHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDALVYGG 125
Query: 1334 --RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELLEL 1389
+ PK+L D+VES A+ +D F+L T W I L+PI+ +LQ P+ L E
Sbjct: 126 SIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVTMLFER 185
Query: 1390 CNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
C ++ K K +A V G+
Sbjct: 186 CQKQGKNVDIKHWKNEAKSIASVYVDGQ 213
Score = 43.5 bits (101), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
L +ALT + S +R+E LGDA L A+ +++L + +D G L+ R+ ++ L
Sbjct: 22 LEEALTHSSYTDSASYQRMEFLGDAALGLALSNYVYLAYPQLDPGHLSLLRAANISTEKL 81
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
++A ++ L ++R AL + KE + + DD +A V
Sbjct: 82 ARVAIKHGLYRFVRHNA------TALDDKV-----KEFSDAVSGE------DDDDALVY- 123
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
G K +AD+VE++ A D F T ++ + GI
Sbjct: 124 --GGSIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGI 162
>gi|146180696|ref|XP_001470932.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146144409|gb|EDK31487.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 1822
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 57/299 (19%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQ EL K + +N I+YL TG GKT IA +LI Y + PQK IFLA TV LV
Sbjct: 106 RNYQKELFKNSYSKNSIIYLETGAGKTMIATMLINYFFQKQKKAPQKKKIIFLANTVQLV 165
Query: 119 QQQAKVI-----------------------EESIGFKVRTF--------CGGSKRLKSHC 147
+QQ I +E I ++ R F C GS + K +
Sbjct: 166 KQQYAEIKNNLQRISEMMENDKEISQILKFQEGINYR-RIFEKENHIVKCHGSYKQKDNL 224
Query: 148 D--------WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPY 199
W+ ++ YE+ VMI Q+LL L +I++E I ++I+DECHH + +HPY
Sbjct: 225 QIETFTKQKWDYLLENYEIFVMIGQVLLNGLRRGYIRIEDIEVIIYDECHHT--RQDHPY 282
Query: 200 AKIMKDFY-----KPDIMKVPRIFGMTASPVVGKGASAQAN-LPKSINSLENLLDAKV-- 251
I +FY + + +++P+I+G+TASPV+ + +N + K I+ L LDA
Sbjct: 283 CLIQYEFYHFHKRRNEQVQLPKIYGLTASPVLDIEVKSDSNIMKKKISELCTNLDANFVK 342
Query: 252 YSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHD 310
Y++E++ + ++ + V +YG N + EQ+ E++IS + K ++
Sbjct: 343 YNIEES---KKYIKEATICVEEYGEEKNIQERANQFLQEQII---GEKWISDIEDKQNE 395
Score = 110 bits (274), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 451 ASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
++ RC LV ++ + S N +E FR EL ++++T V EEG DI +C LVI F+
Sbjct: 670 SAQRC-VLVNLDFEVSKQSEN-----IEAFRKKELQIILSTSVTEEGFDIPSCNLVISFN 723
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRE---------LDLIKNFSKEEDRMNREI 561
+ SF+Q +GRAR S++ + Q++ DLI+ + ++ ++
Sbjct: 724 KISNLKSFVQIKGRARKENSKFIIMAKDKYQKQDYETDIESYKDLIQQIKEIAPKVEKQE 783
Query: 562 MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDL 621
++ + + + K +GA ++ + V+L H Y ++L + N K FYY+ ++
Sbjct: 784 IEIRPNYKYKIVKLTFNKNQETGAILNTNWSVNLFHTYANQLLYSYDSNIKGPFYYYIEI 843
Query: 622 G--GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA 679
G IC II+P+ + + PQ+ E AKKDAC +A+ L++ + D + +++
Sbjct: 844 TNVGFICQIIVPSQSGLKTFCSNPQAQKEDAKKDACFQAVIILYRQYKIFDQI---QNSQ 900
Query: 680 TEDEPMLFSSDSD 692
+E LF + D
Sbjct: 901 SEKSESLFEDEKD 913
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
C QRLEFLGDAVLD +I YL++ +P PG+LT +++ LV N+ + + + FYKF+I
Sbjct: 1605 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1664
Query: 1304 ----FDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLN 1359
+ + +NN +M S + K LGD++ES +GAI +D+ +
Sbjct: 1665 GSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAIFIDNNLDYE 1724
Query: 1360 TVWKIMLSFL 1369
KI++ L
Sbjct: 1725 ITKKIVMETL 1734
Score = 41.2 bits (95), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 1246 QRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+R EFLGD VL L ++ +Y +PK L R++++ N+ A +AV + +K+++
Sbjct: 1443 ERYEFLGDTVLKCLSSTQIYFEHPKSMEDHLHVHRTIIIQNRNLAQIAVKKKIFKYIL 1500
>gi|426361539|ref|XP_004047964.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Gorilla
gorilla gorilla]
Length = 890
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 244/557 (43%), Gaps = 71/557 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 204 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 261
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 262 VYEQQKSVFSKYFERHGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 318
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 319 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 376
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 377 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 434
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQS---LRNTTKQLNRLHDSMKF----------CL- 332
+A++ R+ +L++++ L N ++ NR + K+ C+
Sbjct: 435 -----IAQLMRD--TESLAKRICKDLGTLILENLSQIQNREFGTQKYEQWIVTVQKACMV 487
Query: 333 -------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC 385
E +C AL ++ S + LI E + D+L S V AA
Sbjct: 488 FQMPDKDEESRICKAL---FLYTSHLRKYNDALIINEHARMKDALDYLKDFFSNVRAA-- 542
Query: 386 RRDGIASDLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRI 434
D I DL+ V ++P KL L IL + L I+FV
Sbjct: 543 GFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTR 602
Query: 435 VTARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVAT 491
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT
Sbjct: 603 ALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIAT 662
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS 551
V +EG+DI C LVI ++ V IQ+RGR R S+ L + E + I +
Sbjct: 663 SVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY- 721
Query: 552 KEEDRMNREIMDRTSSD 568
+E MN I+ + D
Sbjct: 722 -KEKMMNDSILRLQTWD 737
>gi|167046032|gb|ABZ10547.1| dicer-like protein E [Trichoplax adhaerens]
Length = 359
Score = 115 bits (287), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 156/369 (42%), Gaps = 38/369 (10%)
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+A+T Q+ F+LERLE LGD +L Y + L H + E+ R N L +
Sbjct: 1 EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
L A + YI PF+ + + P +T +L+ +
Sbjct: 61 LGAGRRIPYYIVGCPFNQNKSWV----PPGFVINQT------------VSELSIAMSREY 104
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
H L KK IAD VE L+G G + F++W+G ++ E I S F
Sbjct: 105 THQPLTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGFEIS-ECLDGIQELIPSIDFRT 163
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC-YQRLEFLGDAVLDYLITSYL 1264
S ++E +L + F +R LL+ A H S++ L Y++L FLGD +L Y I +L
Sbjct: 164 NLYSETANSVETILNYSFRNRSLLMLALTHKSYSGLESISYEKLAFLGDTLLIYQICLFL 223
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL--------------- 1309
Y+ Y +P L L N+ + VA+ KFL+ S L
Sbjct: 224 YTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADD 283
Query: 1310 ----SETINNYVDY-MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
S T+ + Y M T ++ PK LGD + + A+ LD+ + +T +I
Sbjct: 284 VQSFSSTVQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDEDTAGRI 343
Query: 1365 MLSFLDPIL 1373
+ S L+PI
Sbjct: 344 INSLLNPIF 352
>gi|426222380|ref|XP_004005372.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Ovis aries]
Length = 943
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 155/585 (26%), Positives = 254/585 (43%), Gaps = 80/585 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVA 116
R +QLEL A + +N I+ TGCGKT +A+L+ HL + PQ K +F A +
Sbjct: 243 RNFQLELALPAQKGKNTIICAPTGCGKTFVALLICEH--HLKQFPQGRKGKVVFFAVQLP 300
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L +QQ E +G+KV G S + E+ ++ +++++ PQIL+ L
Sbjct: 301 LYEQQKSAFSEYFERLGYKVS---GISGEIADSVSVEQIVENNDIIILTPQILVNSLKDG 357
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY IM ++ + +P++ G+TAS VG
Sbjct: 358 TIPSLSIFTLMIFDECHNTN--KNHPYNMIMFNYLDQKLGGSSDSLPQVVGLTASVGVG- 414
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
A +A + I L LD V + ++ E+LE P + D +
Sbjct: 415 DAKNEAEATEYICRLCASLDTSVLTTVRDNLEELEEVFYKPQKLFRKVESRTTDKFKCVI 474
Query: 287 TCSEQLAEIKREQYISALSRKLHDH---QSLRNTTKQLNRLHDSMKF----------CL- 332
S+ +AE + AL++ + + +L N ++ NR + K+ C+
Sbjct: 475 --SQLMAETE------ALAKSIFEELGTVTLENLSRIQNRNFGTQKYEQWIIAVQKACMV 526
Query: 333 -------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC 385
E +C AL ++ S + LI +E + D+L + S V AA
Sbjct: 527 FQMPDKDEESRICKAL---FLYTSHLRKYNDALIISEDARMKDALNYLKNFFSNVRAA-- 581
Query: 386 RRDGIASDLSCIEVLKEPFF------------SKKLLRLIGILS-TFRLQQHMKCIVFVN 432
D I DL+ + +E + KL L IL + L + I+FV
Sbjct: 582 GFDAIEQDLT--QRFEEKLVELEDISVDPSNENPKLKDLCFILQEEYHLNPETRTILFVK 639
Query: 433 RIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN--AMKSILEKFRSG-ELNLLV 489
AL ++ L+ + L G ++M A K L+ FR+ + +L+
Sbjct: 640 TRALVDALKKWIEENPKLSLLKPCILTGRGRTNQTMGMTLPAQKCALDAFRTNRDSKILI 699
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKN 549
AT V +EG+DI C LVI ++ V IQ+RGR R S+ L + + E + + N
Sbjct: 700 ATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNADVIEKEQL-N 758
Query: 550 FSKEEDRMNREI--MDRTSSDAFTCSEERIYKVDSSGACISAGYG 592
KE+ MN I + R + F +E+I+++ I G
Sbjct: 759 ICKEK-MMNDSISSLQRWNEAVF---KEKIHQIQVQEKLIRDNQG 799
>gi|448426589|ref|ZP_21583438.1| Hef nuclease [Halorubrum terrestre JCM 10247]
gi|445679469|gb|ELZ31936.1| Hef nuclease [Halorubrum terrestre JCM 10247]
Length = 825
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 221/500 (44%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----QAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ +A L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVAHLTFDECHRA--TGDYAYVYIAERYHTD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
+I R+ ++ +L + L NTT K LN++ +K ++N G +
Sbjct: 227 DI-RDALNEVITDRLEKLKQLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|350646449|emb|CCD58848.1| ribonuclease III, putative [Schistosoma mansoni]
Length = 928
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 169/390 (43%), Gaps = 68/390 (17%)
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLH-DTVDEGELTRRRSNAVNNSN 1082
L++ T ++ LERLE GD+FL + ++ + DEG L+ +R + V+N++
Sbjct: 532 LIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSNAH 591
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L +A Y Q F P + F P S +E +YD R
Sbjct: 592 LCDIACDLKWYEYCTGQTFSPPEHFL-----PPCYSVASEAC---KYDPRL--------- 634
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI------------QVEFEA 1190
+ L K++AD+VEAL+G F+ SG AA L + I + EA
Sbjct: 635 ----YTRLTDKSLADMVEALIGCFLLRSGLSAAFNLLHYFQICPVSWSTLKNDKHYKVEA 690
Query: 1191 ---------------------SQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLL 1229
+ ++ IS + L L+ L+ LG+ F LL
Sbjct: 691 PWHFFLQPKLYSELNCGNALNASCRSLHISKEIILELNQRF--FQLQEKLGYYFKGIELL 748
Query: 1230 LQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
+A H S + G YQRLEFLGD++L ++I++YL+ P PG LT RS +V+N
Sbjct: 749 AEAMTHQSSINKQYWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTTARSTVVSNI 808
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS--------TREVKEGPRCPKVL 1339
ANV V+ Y F+ F + L I++ S T++V G KVL
Sbjct: 809 NLANVVVEHDIYPFIDFGNCSLKACIDDIKSIHRQTDSHFERIELITKKVSSGLNV-KVL 867
Query: 1340 GDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
D+ ES LGAI +DS N I+ FL
Sbjct: 868 ADVFESILGAIFVDSNGNHQVASSIIHRFL 897
Score = 51.6 bits (122), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 1015 EGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRR 1074
+G E+ AE + + K Q + +RLE LGD+ L + + +LF G LT R
Sbjct: 743 KGIELLAEAMTHQSSINK-QYWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTTAR 801
Query: 1075 SNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAP 1134
S V+N NL + +++ +I F C + C + ++IH Q D
Sbjct: 802 STVVSNINLANVVVEHDIYPFID---FGNCSL--------KACIDDI-KSIHRQTDSHFE 849
Query: 1135 DDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FIDDSG 1171
E+ K L+ K +ADV E+++GA F+D +G
Sbjct: 850 ---RIELITKKVSSGLNVKVLADVFESILGAIFVDSNG 884
>gi|448441595|ref|ZP_21589202.1| Hef nuclease [Halorubrum saccharovorum DSM 1137]
gi|445688631|gb|ELZ40882.1| Hef nuclease [Halorubrum saccharovorum DSM 1137]
Length = 815
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 219/500 (43%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHCTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + VR Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVRWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
+I R+ ++ +L +SL NTT K LN++ +K ++N G +
Sbjct: 227 DI-RDALNEVITDRLEKLKSLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSAGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINEGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F+ G +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKEGSDGMSQTQQQETLDEFKDGAFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|448489210|ref|ZP_21607584.1| Hef nuclease [Halorubrum californiensis DSM 19288]
gi|445695155|gb|ELZ47266.1| Hef nuclease [Halorubrum californiensis DSM 19288]
Length = 814
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 219/500 (43%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQLEL A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLELADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ + F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSIPDDDIVVFTGDVKPDDRVALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + VR Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVRWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
+I R+ ++ +L + L +TT K LN++ +K ++N G +
Sbjct: 227 DI-RDALNEVITDRLEKLKQLGVTDTTNPDLSQKDLNKMRGQLKQMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGIDGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKDGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|402897212|ref|XP_003911664.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Papio anubis]
Length = 925
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 238/550 (43%), Gaps = 62/550 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT ++VL+ HL + P QK +F A +
Sbjct: 244 RNYQLELALPAKKGKNTIICAPTGCGKTLVSVLICEH--HLKKFPPGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 302 VYEQQESVFSKYFERLGYRVTGISGAT---AENVPVEQIVENNDIIILTPQILVNNLKKG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
L I L LDA V + ++ E+LE V P ++ + S
Sbjct: 417 AKDTDEAL-DYICKLCASLDASVIATVKDNLEELEQVVYKP----QKFFRKVESRVSDKF 471
Query: 287 TCSEQLAEIKR--EQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
C +A++ R E + + L ++N T K + K C+
Sbjct: 472 KCI--IAQLMRDTESLAKRICKDLESFSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKD 529
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 530 EESRICKAL---FLYTSHLRKYNDALIISEHARVKDALDYLKDFFSNVRAA--GFDETEQ 584
Query: 393 DLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALS 441
DL+ V ++P KL L IL + L I+FV AL
Sbjct: 585 DLTQRFEEKLQELESVSRDPSNENPKLEDLRFILQEEYHLNPETITILFVKTRALVDALK 644
Query: 442 YILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGL 498
++ L+ + L G ++ M+ A K IL+ F+ +G+ N+L+AT V +EG+
Sbjct: 645 NWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKVNGDHNILIATSVADEGI 704
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN 558
DI C LVI ++ V IQ+RGR R S+ L + E + I + +E MN
Sbjct: 705 DIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMY--KEKMMN 762
Query: 559 REIMDRTSSD 568
I+ + D
Sbjct: 763 DSILRLQTWD 772
>gi|167046034|gb|ABZ10548.1| dicer-like protein E [Placozoa sp. DMJ-2008]
Length = 359
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 156/369 (42%), Gaps = 38/369 (10%)
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
+A+T Q+ F+LERLE LGD +L Y + L H + E+ R N L +
Sbjct: 1 EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
L A + YI PF+ + + P +T +L+ +
Sbjct: 61 LGAGRRIPYYIVGCPFNQNKSWV----PPGFVINQT------------VSELSIAMSREY 104
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
H L KK IAD VE L+G G + F++W+G ++ E I S F
Sbjct: 105 THQPLTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGFEIS-ECLDGIQELIPSIDFRA 163
Query: 1206 LSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC-YQRLEFLGDAVLDYLITSYL 1264
S ++E +L + F +R LL+ A H S++ L Y++L FLGD +L Y I +L
Sbjct: 164 NLYSETANSVETILNYSFRNRSLLMLALTHKSYSGLESISYEKLAFLGDTLLIYQIYLFL 223
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVL--------------- 1309
Y+ Y +P L L N+ + VA+ KFL+ S L
Sbjct: 224 YTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIYQALEADD 283
Query: 1310 ----SETINNYVDY-MITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
S T+ + Y M T ++ PK LGD + + A+ LD+ + +T +I
Sbjct: 284 VQSFSSTVQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPHEDTAGRI 343
Query: 1365 MLSFLDPIL 1373
+ S L+PI
Sbjct: 344 INSLLNPIF 352
>gi|296190081|ref|XP_002743043.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Callithrix
jacchus]
Length = 925
Score = 114 bits (284), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 243/556 (43%), Gaps = 74/556 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +A+L+ HL + PQ K +F A +
Sbjct: 244 RSYQLELALPAKKGKNTIICAPTGCGKTLVALLICEH--HLKKFPQGQKGKVVFFANQIP 301
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G++V G + + ++ ++ +++++ PQIL+ L +
Sbjct: 302 VYEQQKSVFSKYFERLGYRVTGISGATA---ENVPVKQIVENNDIIILTPQILVNNLKNG 358
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 359 TIPSLSIFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + ++ ++LE V P + I+D +
Sbjct: 417 AKNTDEAL-DYICKLCASLDASVIATVQDNLKELEQVVYKPQKFFRKVESRISDKFKCII 475
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
A++ RE L++++ + L N ++ NR + K+ C+
Sbjct: 476 ------AQLMRE--TEGLAKRIC--KDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 525
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 526 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALHYLKDFFSNVRAA--GFD 580
Query: 389 GIASDLS---------CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARA 439
DL+ + ++P S + +L + R + H+ V RA
Sbjct: 581 ETEQDLTQRFEEKLQELESISRDP--SNENPKLEDLCFILREEYHLNPETITILFVKTRA 638
Query: 440 LSYILQNLKFLASWRCHFLVGVNAGLKSMSRN------AMKSILEKFRS-GELNLLVATK 492
L L+N S G+ G ++N A K IL+ F++ G+ N+L+AT
Sbjct: 639 LVDALKNWIEGNSKLSFLKPGILTGRSKTNQNTGMTLPAQKCILDSFKAHGDHNILIATS 698
Query: 493 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSK 552
V +EG+DI C LVI ++ V IQ+RGR R S+ L + E + I +
Sbjct: 699 VADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNAAVIEKENINMY-- 756
Query: 553 EEDRMNREIMDRTSSD 568
+E MN I+ + D
Sbjct: 757 KEKMMNDSILRLQTWD 772
>gi|346972329|gb|EGY15781.1| hypothetical protein VDAG_06945 [Verticillium dahliae VdLs.17]
Length = 1187
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 226/515 (43%), Gaps = 64/515 (12%)
Query: 202 IMKDFYKP---DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DA 257
IM +FY P + VP + G+TASP++ ++ L + + +LE LD+ +
Sbjct: 2 IMMNFYHPRKQSALSVPHVLGLTASPIM------RSRL-EGLEALEQTLDSVCVTPRLHR 54
Query: 258 EDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE-----QLAEIKREQYISALSRK----- 307
+DL + V P V Y V+ S + +I+++ Y+ L K
Sbjct: 55 DDLMTHVKRPTVCYVHYETTDAKDEPKPVSISSLREACRNMDIRQDPYVICLRDKGTDRA 114
Query: 308 -------LHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIE 360
L H++ ++ +Q+ + L +LG A + + ++ T +IE
Sbjct: 115 RRELIKVLTSHKT--DSQQQMKSFFNQSLRVLRDLGPWAAEYYIWKVV----TDFLAIIE 168
Query: 361 AEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFR 420
A D + + ++ + A I R+ I+ + +L S K++ L+ LS+ +
Sbjct: 169 AR----DHRMNQRNTEEKQYLANILRQISISE--PPVSMLSAHNTSNKVMVLMEYLSS-K 221
Query: 421 LQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG----------LKSMSR 470
I+FV TA L++++++ + H VGV G + +SR
Sbjct: 222 ATDGTVGIIFVKERSTAAMLAHVIESHPLTQN--RHSSVGVVVGASTHLVRKKDMWDLSR 279
Query: 471 NAMKS-ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
A ++ L +FRSG LNLL+AT V EEG+D+ C LVI FD PE + +F+Q RGRAR
Sbjct: 280 AAHETEPLLQFRSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRGRARKKD 339
Query: 530 SEYAFLVDSGNQRELD---LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
S L+ + D + +R REI +A ++ Y V+S+ A
Sbjct: 340 SSLVVLLPGTDHVPQDWESMEATMRTHYEREQREIQIMEQIEASESAKYEEYVVESTNAR 399
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFY-YFDDLG---GTICHIILPANAPI---HQI 639
+ + L +C +L EF + +P++ D G ++LP+ P H
Sbjct: 400 LDFENAKAHLSNFCGQLSPGEFIDKRPEYIPRVVDNGVPPSLRVTVLLPSYVPAAVRHAE 459
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
S A KDA +A L+K G +N+++LP
Sbjct: 460 SRRSWKSEHQASKDAAFQAYVALYKAGLVNEHMLP 494
Score = 47.8 bits (112), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 101/247 (40%), Gaps = 45/247 (18%)
Query: 932 PLLRAKPLFRLRNLLHNRKLED--SESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
P L + R LLH +K+ D ++ + Y P ++ I D +L+
Sbjct: 693 PYLALRKWPRYLALLHQQKVNDLLPQATNKKPYARVYPAPWAKVDTIPL--DHAYFGALI 750
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEILGDA 1048
P I H +E LVA +L S+S S ++L A++T+ E + ERLE+LGD+
Sbjct: 751 PFISHIVEVRLVAEQL----SSSLLRDLNFSDPSLVLAAISTKGSLEATNYERLELLGDS 806
Query: 1049 FLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFA 1108
LK + LH V+NS L + A L ++ + F C+
Sbjct: 807 ILKLCTTANAAALH-------------GLVSNSRLCRAALDAGLDKFVLTENFT-CR--- 849
Query: 1109 LGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID 1168
T R I+ +D+ + G + KT+AD+VEAL+GA
Sbjct: 850 ------------TWRPIYV-------NDMMEKGARDSGPRIMSTKTLADIVEALIGAAYI 890
Query: 1169 DSGFKAA 1175
D G A
Sbjct: 891 DGGLPKA 897
>gi|319656775|gb|ADV58759.1| retinoic acid inducible protein I [Anser anser]
Length = 934
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 248/559 (44%), Gaps = 65/559 (11%)
Query: 47 GAQKTDKDP----KQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
A+ DK P + AR YQ+EL + A+ +N ++ TG GKT IA+L+ +
Sbjct: 230 AAEGIDKPPPVYEAKKARSYQIELAQPAINGKNALICAPTGSGKTFIALLVCEHHFQNMP 289
Query: 102 KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVM 161
+K +FLA V + +QQ V ++ + + G S S+ E I+ +++V+
Sbjct: 290 AGRKGKVVFLATKVPVYEQQKNVFKQHFERQGYSIQGVSGENFSNVSVENVIEDNDIIVL 349
Query: 162 IPQILLYCLYH-RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF----YKPDIMKVPR 216
PQIL+ + + L+IFDECH+ NHPY +M + + ++P+
Sbjct: 350 TPQILVNSFEDGTLTSLSVFTLMIFDECHN--TTGNHPYNVLMTRYLEQKFNSPASQLPQ 407
Query: 217 IFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVV----- 269
I G+TAS VG + + + + I SL + LD + S E+ +DL+ F++ P +
Sbjct: 408 ILGLTASVGVGNAKNIEETI-EHICSLCSYLDIQAISTVRENIQDLQRFMNKPEIDVRLV 466
Query: 270 --RVY-QYGPVINDTSSSYVTCSEQLAEIKREQYISALSRK-----LHDHQSLRNTTK-Q 320
RV+ + +I+D S ++ + +S SRK ++H + K +
Sbjct: 467 KRRVHNHFAVIISDLMSETEALMRKIYSVGT---VSQNSRKDFGTQKYEHWIVVTQRKCR 523
Query: 321 LNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEV 380
L +L D E +C AL +I + LI +E I D+L S +E
Sbjct: 524 LLQLEDKE----EESRICRAL---FICTEHLRKYNDALIISEDARIIDAL----SYLTEF 572
Query: 381 FAAICRRDG----IASDLSCIEVLKEPFFSK----------KLLRLIGIL-STFRLQQHM 425
F + ++G + L+ KEP + KL L IL +
Sbjct: 573 FTNV--KNGPYTELEQHLTAKFQEKEPELTALSKDETNENPKLEELACILDDAYCYNPQT 630
Query: 426 KCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK--SMSRNAMKSILEKFR-S 482
+ ++F AL ++ L+ + L+G + M+ + K +L+ F+ S
Sbjct: 631 RTLLFAKTRALVAALKKCMEENPILSYIKPDVLMGRGRRDQKTGMTLPSQKGVLDAFKTS 690
Query: 483 GELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
+ LL+AT V +EG+DI C LV+ ++ V IQ RGR R S+ LV S +
Sbjct: 691 KDSRLLIATSVADEGIDIAQCNLVVLYEYSGNVTKMIQVRGRGRAAGSK-CILVTSKTEV 749
Query: 543 ELDLIKNFSKEEDRMNREI 561
+ N KEE MN+ I
Sbjct: 750 VENEKCNRYKEE-MMNKAI 767
>gi|169665428|gb|ACA63429.1| dicer-like 1 protein [Chlamydomonas reinhardtii]
Length = 2243
Score = 113 bits (283), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 25/220 (11%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ EL + A + ++Y TG GKT IAV I E AH + FLAPTV LV
Sbjct: 9 REYQAELLRMARRHASTVIYAETGTGKTRIAVERILE-AHGELVAAGRLAAFLAPTVPLV 67
Query: 119 QQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+QQA+V+ + G +V + G R ++ W++ + +VL P L + H FI +
Sbjct: 68 RQQAEVLV-AAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIAHAFITI 126
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYK----PDIMKVPRIFGMTASPVVGKGASAQ 233
+ +++FDECHH +NHPYA +++ F + PD + P + G+TAS
Sbjct: 127 PQLGMIVFDECHH--TNANHPYAVLLRVFVRHLTPPD--QRPVLLGLTAS---------- 172
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ 273
P + L LL A++ + + L++F++ P V V++
Sbjct: 173 ---PHKADELMRLLGAQMVAASNTAQLQTFMAKPRVEVHR 209
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 427 CIVFVNRIVTARALSYILQNLKFL--ASWRCHFLVGVNAGLKSMSRNAM-----KSILEK 479
+VF R V AL +L L + R +G S S AM + +
Sbjct: 701 AMVFCQRKVACVALHRLLTELPAARGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRA 760
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
F SG LN+L++T VG EGLD +TC VI D P+ V F+Q GRAR P S Y L+ +
Sbjct: 761 FSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQCAGRARAPGSCY--LLFAR 818
Query: 540 NQRELDLIKNFSKEEDRM-----------NREIMDRT----------SSDAFTCSEE--- 575
+ R+ I S+EE M RE R S D +EE
Sbjct: 819 DDRQQQAIAKRSREEADMVAKALKLSTAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQ 878
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLP---HDEFFNPKPKFYYFDDLGGT-------I 625
+++V +GA + +LL YC LP D P +Y + + +
Sbjct: 879 NLFRVPHTGAVMCGPLAQNLLESYCRTLPGNSGDVLLQP---YYSYQEYESPLTRRKAFV 935
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
+ +PAN+P+ + G QS+ A++ AC+ + L++LGAL+++LLP+
Sbjct: 936 ATVHMPANSPLGVVEGPMQSNKGDARQHACMATVRRLYELGALDEHLLPR 985
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 31/135 (22%)
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVD---EGELTRRRSNAVNNSNLLKLAARNNLQ 1093
F ERLE LGDA LKY +++ V EG ++ +R V N L A LQ
Sbjct: 1591 FDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGLQ 1650
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA-EVRCSKGHHWLHK 1152
++R P+D ER + ++ + A EVR
Sbjct: 1651 HHMRALPYD------------------MERVLRGRHWNTGEEAARAQEVR---------G 1683
Query: 1153 KTIADVVEALVGAFI 1167
K +AD VEALVG +
Sbjct: 1684 KRLADCVEALVGCHL 1698
Score = 41.2 bits (95), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 1333 PRCPKVLGDLVESSLGAILLDSGFNL 1358
PR PKVL D+VE++LGAI LDSG +L
Sbjct: 2073 PRAPKVLADVVEAALGAIWLDSGGDL 2098
>gi|189182361|gb|ACD81882.1| dicer-like nuclease 1 [Chlamydomonas reinhardtii]
Length = 2236
Score = 113 bits (283), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 25/220 (11%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ EL + A + ++Y TG GKT IAV I E AH + FLAPTV LV
Sbjct: 9 REYQAELLRMARRHASTVIYAETGTGKTRIAVERILE-AHGELVAAGRLAAFLAPTVPLV 67
Query: 119 QQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+QQA+V+ + G +V + G R ++ W++ + +VL P L + H FI +
Sbjct: 68 RQQAEVLV-AAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIAHAFITI 126
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYK----PDIMKVPRIFGMTASPVVGKGASAQ 233
+ +++FDECHH +NHPYA +++ F + PD + P + G+TAS
Sbjct: 127 PQLGMIVFDECHH--TNANHPYAVLLRVFVRHLTPPD--QRPVLLGLTAS---------- 172
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ 273
P + L LL A++ + + L++F++ P V V++
Sbjct: 173 ---PHKADELMRLLGAQMVAASNTAQLQTFMAKPRVEVHR 209
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 131/290 (45%), Gaps = 46/290 (15%)
Query: 427 CIVFVNRIVTARALSYILQNLKFL--ASWRCHFLVGVNAGLKSMSRNAM-----KSILEK 479
+VF R V AL +L L + R +G S S AM + +
Sbjct: 701 AMVFCQRKVACVALHRLLTELPAARGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRA 760
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
F SG LN+L++T VG EGLD +TC VI D P+ V F+Q GRAR P S Y L+ +
Sbjct: 761 FSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQCAGRARAPGSCY--LLFAR 818
Query: 540 NQRELDLIKNFSKEEDRM-----------NREIMDRT----------SSDAFTCSEE--- 575
+ R+ I S+EE M RE R S D +EE
Sbjct: 819 DDRQQQAIAKRSREEADMVAKALKLSTAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQ 878
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLP---HDEFFNPKPKFYYFDDLGGT-------I 625
+++V +GA + +LL YC LP D P +Y + + +
Sbjct: 879 NLFRVPHTGAVMCGPLAQNLLESYCRTLPGNSGDVLLQP---YYSYQEYESPLTRRKAFV 935
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
+ +PAN+P+ + G QS+ A++ AC+ + L++LGAL+++LLP+
Sbjct: 936 ATVHMPANSPLGVVEGPMQSNKGDARQHACMATVRRLYELGALDEHLLPR 985
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 31/132 (23%)
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVD---EGELTRRRSNAVNNSNLLKLAARNNLQ 1093
F ERLE LGDA LKY +++ V EG ++ +R V N L A LQ
Sbjct: 1591 FDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGLQ 1650
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA-EVRCSKGHHWLHK 1152
++R P+D ER + ++ + A EVR
Sbjct: 1651 HHMRALPYD------------------MERVLRGRHWNTGEEAARAQEVR---------G 1683
Query: 1153 KTIADVVEALVG 1164
K +AD VEALVG
Sbjct: 1684 KRLADCVEALVG 1695
Score = 41.2 bits (95), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 1333 PRCPKVLGDLVESSLGAILLDSGFNL 1358
PR PKVL D+VE++LGAI LDSG +L
Sbjct: 2073 PRAPKVLADVVEAALGAIWLDSGGDL 2098
>gi|159473675|ref|XP_001694959.1| dicer-like protein [Chlamydomonas reinhardtii]
gi|158276338|gb|EDP02111.1| dicer-like protein [Chlamydomonas reinhardtii]
Length = 1927
Score = 113 bits (283), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 25/220 (11%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ EL + A + ++Y TG GKT IAV I E AH + FLAPTV LV
Sbjct: 9 REYQAELLRMARRHASTVIYAETGTGKTRIAVERILE-AHGELVAAGRLAAFLAPTVPLV 67
Query: 119 QQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
+QQA+V+ + G +V + G R ++ W++ + +VL P L + H FI +
Sbjct: 68 RQQAEVLV-AAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIAHAFITI 126
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYK----PDIMKVPRIFGMTASPVVGKGASAQ 233
+ +++FDECHH +NHPYA +++ F + PD + P + G+TAS
Sbjct: 127 PQLGMIVFDECHH--TNANHPYAVLLRVFVRHLTPPD--QRPVLLGLTAS---------- 172
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ 273
P + L LL A++ + + L++F++ P V V++
Sbjct: 173 ---PHKADELMRLLGAQMVAASNTAQLQTFMAKPRVEVHR 209
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 32/276 (11%)
Query: 427 CIVFVNRIVTARALSYILQNLKFL--ASWRCHFLVGVNAGLKSMSRNAM-----KSILEK 479
+VF R V AL +L L + R +G S S AM + +
Sbjct: 605 AMVFCQRKVACVALHRLLTELPAARGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRA 664
Query: 480 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
F SG LN+L++T VG EGLD +TC VI D P+ V F+Q GRAR P S Y L+ +
Sbjct: 665 FSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQCAGRARAPGSCY--LLFAR 722
Query: 540 NQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEER----------IYKVDSSGACISA 589
+ R+ I S+EE M + + +++ A + + VD +
Sbjct: 723 DDRQQQAIAKRSREEADMVAKALKLSTAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQ 782
Query: 590 GYGVSLLHRYCSKLP---HDEFFNPKPKFYYFDDLGGT-------ICHIILPANAPIHQI 639
+LL YC LP D P +Y + + + + +PAN+P+ +
Sbjct: 783 NLFRNLLESYCRTLPGNSGDVLLQP---YYSYQEYESPLTRRKAFVATVHMPANSPLGVV 839
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
G QS+ A++ AC+ + L++LGAL+++LLP+
Sbjct: 840 EGPMQSNKGDARQHACMATVRRLYELGALDEHLLPR 875
Score = 42.0 bits (97), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 31/135 (22%)
Query: 1037 FSLERLEILGDAFLKYAVGRHLFLLHDTVD---EGELTRRRSNAVNNSNLLKLAARNNLQ 1093
F ERLE LGDA LKY +++ V EG ++ +R V N L A LQ
Sbjct: 1399 FDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGLQ 1458
Query: 1094 VYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA-EVRCSKGHHWLHK 1152
++R P+D ER + ++ + A EVR
Sbjct: 1459 HHMRALPYD------------------MERVLRGRHWNTGEEAARAQEVR---------G 1491
Query: 1153 KTIADVVEALVGAFI 1167
K +AD VEALVG +
Sbjct: 1492 KRLADCVEALVGCHL 1506
>gi|448451900|ref|ZP_21593072.1| Hef nuclease [Halorubrum litoreum JCM 13561]
gi|445810116|gb|EMA60148.1| Hef nuclease [Halorubrum litoreum JCM 13561]
Length = 825
Score = 113 bits (283), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 220/500 (44%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----QAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
+I R+ ++ +L + L NTT K LN++ +K ++N G +
Sbjct: 227 DI-RDALNEVITDRLEKLKQLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|432934592|ref|XP_004081944.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Oryzias latipes]
Length = 974
Score = 113 bits (283), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 152/560 (27%), Positives = 244/560 (43%), Gaps = 98/560 (17%)
Query: 41 GAESSVGAQKTDKDPKQIA-RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAH 98
G+ S+ + + + +I+ YQ+E+ K A+E +NII+ L TG GKT +AV + E
Sbjct: 256 GSASAAAGEPSSPEKAEISLWDYQMEVAKPALEGKNIIICLPTGSGKTRVAVYITKEHLD 315
Query: 99 LIRKPQK-SICIFLAPTVALVQQQ-----AKVIEESIGFKVRTFCGGSKRLKSHCDWEKE 152
L R K + L V LV+Q ++ S +KV G S+ LK + K
Sbjct: 316 LRRAEGKLGKVVVLVNKVPLVEQHYTKEFTPYLKHS--YKVERVSGDSQ-LK--ISFAKI 370
Query: 153 IDQYEVLVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF 206
+ + ++++ QIL L +K+ ++L+I DECHH Q Y IM +
Sbjct: 371 VQRNDIIICTAQILENYLERATSGVDEGVKLSDLSLMIIDECHHTQ--KGEAYNHIMMRY 428
Query: 207 ------------YKPDIMKVPRIFGMTASPVVGKGASAQ----------ANLPKSINSLE 244
+ +I+ +P+I G+TASP VG+ A + ANL S
Sbjct: 429 LKQKHKNKKLKKEQKEIVPLPQILGLTASPGVGRAARLEKAKEHILQICANLDASQIMTR 488
Query: 245 NLLDAK------VYSVEDAE-----DLESFVSSPVVRVYQYGPVINDTSSSYVTCS---E 290
+L D K + +VED + D+ + + R + P + + Y S E
Sbjct: 489 SLRDFKREPRKSIQTVEDKKQDPFGDVIKRIMHEIHRHAELNPTGDLGTQVYEQWSVQKE 548
Query: 291 QLAEIKREQYISALSRKLHDHQS---LRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
+ A + +Q + + L + + LRNT R+HD++ L N Y
Sbjct: 549 RQAAREGDQKVRVCAEYLRQYNNGLILRNTI----RMHDALSL-LNNY-----YEEQYKK 598
Query: 348 LSG-DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFS 406
S DE ++ + E RF +F L+ K P +
Sbjct: 599 KSAPDEEQNIQITDTE---------RF------LFNLFKENKKELESLA-----KNPEYE 638
Query: 407 KKLLRLI--GILSTFRLQQHMKCIVFVNRIVTARALS-YILQNLKF-LASWRCHFLVGV- 461
+ L + IL F ++ + I+F +A L+ +I +N KF + +++G
Sbjct: 639 NESLSKLRTEILKEFSSRKQARGIIFTKTRHSAITLNQWIQENPKFDDIGIKPAYVIGGG 698
Query: 462 -NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ +K M+ K +L+KF +GE+NLLVAT V EEGLDI C VIR+ + IQ
Sbjct: 699 DQSDVKPMTAAEQKDVLKKFSTGEVNLLVATTVAEEGLDIPACNFVIRYGHVTNEIAMIQ 758
Query: 521 SRGRARMPQSEYAFLVDSGN 540
S+GR R S Y +VD N
Sbjct: 759 SQGRGRAEDSTYT-VVDVKN 777
>gi|67525463|ref|XP_660793.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
gi|40743766|gb|EAA62953.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
Length = 1726
Score = 113 bits (282), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 131/270 (48%), Gaps = 29/270 (10%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL-KSMSRNAM----------KSI 476
++FV + +SY+L S R F G G+ S +R M
Sbjct: 648 LIFVEQRAAVTVMSYLLSTH---PSTRDRFRTGSFIGMSNSTNRKTMLGDLLSAKMQPDT 704
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L+ FR G NL+VAT V +EG+D+ C +VI +++P+ SFIQ RGRAR S Y+ ++
Sbjct: 705 LDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQRRGRARRQNSTYSMML 764
Query: 537 DSGNQ-RELDLIKNFSK-------EEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACIS 588
+ + LD + F K E+ R E+ S D C+ + V S+GA ++
Sbjct: 765 STEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGSLDEDVCTR---FCVRSTGAILT 821
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQS 645
A Y + L +C LP + KP+F + + GG + +ILP+ N + + G
Sbjct: 822 AEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGGLLRAKVILPSSVNPKVRRAEGKAWW 881
Query: 646 SME-AAKKDACLKAIEDLHKLGALNDYLLP 674
E AAKK+A A + L++ G +ND LLP
Sbjct: 882 KTERAAKKEAAFYAYKALYEHGLVNDNLLP 911
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 132/313 (42%), Gaps = 46/313 (14%)
Query: 988 LLPSIMHRLENLLVAIEL--KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+P I+ RLE LVA L L F + V + A+T Q +R E
Sbjct: 1157 FIPVILDRLEAALVATRLCETVLRDIQFQDLRHV-----ITAITMPLAQAPTDYQRYEFF 1211
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK+ V LF + EG LT V N+ L + A L YI F P +
Sbjct: 1212 GDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRK 1271
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ A P I K + S + K +ADVVEAL+GA
Sbjct: 1272 WSA-----PLISEK---------------------LYASASTRSMSAKVLADVVEALIGA 1305
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS------LDMATLEILL 1219
D G A + + ++E ++ + +P+S + LE +
Sbjct: 1306 AYIDGGLHKAQSCIVRFLPEIELPETK-----LPRPESMPMSKDHKKPHLIQQENLENHI 1360
Query: 1220 GHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LL++A HPS ++ YQRLEFLGDAVLD LI + + + + + G++T
Sbjct: 1361 GYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMT 1420
Query: 1278 DLRSMLVNNQAFA 1290
++ +VN A
Sbjct: 1421 KIKHAIVNGHLLA 1433
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI- 1303
YQR EF GD+VL + + + L+ P G LT+ LV N A+DQ ++I
Sbjct: 1205 YQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIIS 1264
Query: 1304 --FDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFN 1357
F S + + + + +STR + KVL D+VE+ +GA +D G +
Sbjct: 1265 NRFTPRKWSAPLIS--EKLYASASTRSMSA-----KVLADVVEALIGAAYIDGGLH 1313
>gi|355683392|gb|AER97092.1| DEAD box polypeptide 58 [Mustela putorius furo]
Length = 928
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 245/558 (43%), Gaps = 85/558 (15%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVA 116
R YQLEL A E +N ++ TGCGKT +++L+ HL + PQ K +F A +
Sbjct: 243 RNYQLELTLPAKEGKNTLICAPTGCGKTLVSLLICEH--HLKKFPQERKGKVVFFAIQLP 300
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L +QQ + E +G+KV G + S E+ ++ +++++ PQIL+ L +
Sbjct: 301 LYEQQKSIFSDYFEKLGYKVAGISGVTAETVSV---EQIVENNDIIILTPQILVNSLRNG 357
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
+ + + L+IFDECH+ NHPY IM ++ + +P++ G+TAS G
Sbjct: 358 TLPSLSVFTLMIFDECHNT--GKNHPYNMIMFNYIDQKLGGSSDPLPQVIGLTASVGTGD 415
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
+ + + +L A + +V+D E+LE P ++ + ++
Sbjct: 416 AKNTKEAMEYICKLCASLDTAVIATVKDNLEELEEVAYKP----QKFFRKVESRTTDRFK 471
Query: 288 CSEQLAEIKREQYISALSRKLHDH---QSLRNTTKQLNRLHDSMKF----------CL-- 332
C ++++ RE +L++ + D +L N ++ NR + K+ C+
Sbjct: 472 CI--ISQLMRE--TESLAKSIFDELGTVTLENVSQIQNRSFGTQKYEQWIVSVQKACMVV 527
Query: 333 ------ENLGVCGA--LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQA-----SE 379
E +C A L+ S++ D M NE A D L F + E
Sbjct: 528 QLPDKDEESRICKALYLYTSHLRKYNDALMINE--HARMKDALDYLKDFFADVRSAGFDE 585
Query: 380 VFAAICRR--------DGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVF 430
+ RR + ++ DLS + P KL L IL + L + I+F
Sbjct: 586 TEQDLTRRFEEKLKELESVSMDLSN----ENP----KLKDLSFILQEEYHLNPESRTILF 637
Query: 431 VNRIVTARALSYILQNLKFLASWRCHFLVG-----VNAGLKSMSRNAMKSILEKFRS-GE 484
V AL ++ L+ L G N G M+ A K L+ FR+ G+
Sbjct: 638 VKTRALVDALKKWIEENSELSFLNPGILTGRGKTNQNTG---MTLPAQKCALDAFRTDGD 694
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
+L+AT V +EG+DI C LVI ++ V IQ+RGR R S+ L + + E
Sbjct: 695 KKILIATSVADEGIDIAECNLVILYEYVGNVIRMIQTRGRGRAKGSKCFLLTSNADVIEK 754
Query: 545 DLIKNFSKEEDRMNREIM 562
+ I + +E+ MN I+
Sbjct: 755 EKINIY--KENMMNESIL 770
>gi|413948832|gb|AFW81481.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 285
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 13/214 (6%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
A +E LL +QF R LL +A H SF+ YQRLEF+GDA L +++LY P L
Sbjct: 42 ARVERLLRYQFCDRALLEEALTHQSFSDGALSYQRLEFVGDAALGLAFSNFLYLTNPTLG 101
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITP 1323
PG L+ LR+ ++ + A VAV Y L L + ++ D P
Sbjct: 102 PGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQELMHDLATAP 161
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
VK PKVL D+VE+ A+ +D F+L +WK+ +PI+ + P+
Sbjct: 162 YGGSVVK----APKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPV 217
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
L ELC + QF + +K G + V G+
Sbjct: 218 TTLHELCQKHGKVAQFKTWQKDGMIVVNVFVGGE 251
Score = 44.7 bits (104), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 1023 MLLKALTTEKCQE-RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
+L +ALT + + S +RLE +GDA L A L+L + T+ G L+ R+ ++
Sbjct: 57 LLEEALTHQSFSDGALSYQRLEFVGDAALGLAFSNFLYLTNPTLGPGALSTLRAANISTE 116
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV 1141
L ++A R++L +R R+CPR+ + Q+ +L ++
Sbjct: 117 KLARVAVRHDLYPLLR-------------RKCPRL------DLLVGQFIESVKQELMHDL 157
Query: 1142 RCSK--GHHWLHKKTIADVVEALVGAFIDDSGF 1172
+ G K +AD+VEA+ A D F
Sbjct: 158 ATAPYGGSVVKAPKVLADIVEAIAAAVYVDCKF 190
>gi|334322694|ref|XP_001366879.2| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Monodelphis
domestica]
Length = 679
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 232/554 (41%), Gaps = 73/554 (13%)
Query: 62 YQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQ E+ A+E +NII++L TG GKT A + HL + + L V LV Q
Sbjct: 6 YQWEVILPALEGKNIIIWLPTGAGKTRAAAYVAKR--HLDMMDGAKVAV-LVNKVHLVSQ 62
Query: 121 QAKVIEESIG--FKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
K + +G + + T G G + H + ++++ ++L L
Sbjct: 63 HEKEFRQMLGPQWTIVTMSGDRGPRAGFGHM-----VRCTDLVICTAELLRLALISTEEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM---KVPRIFGMTASPVVGKG 229
+++ +LLI DECHH Q S Y I+ + + + +P++ G+TASP G
Sbjct: 118 EHVELSAFSLLIVDECHHTQKDS--VYNVILSHYLERKLQGATALPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVY--------QYGPVIND 280
++ + + NL + S + E LE S P R +G ++
Sbjct: 176 STLEGAKNHILQLCANLDTCHISSPQRYYEQLEEHSSRPCKRYDLSQERNPDPFGDLLKK 235
Query: 281 TSSSYVTCSEQLAEIKR-------EQYISALSRKLHD--HQSLRNTTKQLNRLHDSMKFC 331
+ ++ E+ R EQ + LS K + H R L R +D++
Sbjct: 236 LMDE-IQDRLEMPELSRDFGSQNYEQQVVELSNKAAEQGHLQRRVFAMHLRRYNDAL-LI 293
Query: 332 LENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
+ AL + + ++ + ++ AE L + + E A + A
Sbjct: 294 HGTVRAVDALTSLASFYTEEQMTKVGVLPAE-----RWLLQLFDRHKEALALL------A 342
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
SD F + KL L IL F + I+F +ARAL LQ L
Sbjct: 343 SDAQ--------FENPKLKDLEDILEELFSSPDPSRGIIFARTRRSARALVLWLQEQPRL 394
Query: 451 ASW--RCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
+ H L G ++ + M++ + ++++FR G LNLLVAT V EEGLDI C ++
Sbjct: 395 QRLGIKAHVLTGAGNSSQITHMTQTEQREVIQRFREGTLNLLVATSVAEEGLDIPQCNMI 454
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS 566
+R+DL S +Q+RGRAR QS Y+F+ G+ K +E E + R +
Sbjct: 455 VRYDLLTNEISMMQARGRARASQSMYSFVAGQGS-------KELHREMTNEALEALMRQA 507
Query: 567 SDAFTCSEERIYKV 580
A EE+ YK
Sbjct: 508 VSAVQRMEEKEYKT 521
>gi|448484173|ref|ZP_21605958.1| Hef nuclease [Halorubrum arcis JCM 13916]
gi|445820346|gb|EMA70172.1| Hef nuclease [Halorubrum arcis JCM 13916]
Length = 825
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 220/500 (44%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
+I R+ ++ +L + L NTT K LN++ +K ++N G +
Sbjct: 227 DI-RDALNEVITDRLEKLKQLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|259485853|tpe|CBF83228.1| TPA: Dicer-like protein 2 [Includes Endoribonuclease dcl2(EC
3.1.26.-);ATP-dependent helicase dcl2(EC 3.6.1.-)]
[Source:UniProtKB/Swiss-Prot;Acc:P0C5H7] [Aspergillus
nidulans FGSC A4]
Length = 1269
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 131/270 (48%), Gaps = 29/270 (10%)
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL-KSMSRNAM----------KSI 476
++FV + +SY+L S R F G G+ S +R M
Sbjct: 191 LIFVEQRAAVTVMSYLLSTH---PSTRDRFRTGSFIGMSNSTNRKTMLGDLLSAKMQPDT 247
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L+ FR G NL+VAT V +EG+D+ C +VI +++P+ SFIQ RGRAR S Y+ ++
Sbjct: 248 LDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQRRGRARRQNSTYSMML 307
Query: 537 DSGNQ-RELDLIKNFSK-------EEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACIS 588
+ + LD + F K E+ R E+ S D C+ + V S+GA ++
Sbjct: 308 STEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGSLDEDVCTR---FCVRSTGAILT 364
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQS 645
A Y + L +C LP + KP+F + + GG + +ILP+ N + + G
Sbjct: 365 AEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGGLLRAKVILPSSVNPKVRRAEGKAWW 424
Query: 646 SME-AAKKDACLKAIEDLHKLGALNDYLLP 674
E AAKK+A A + L++ G +ND LLP
Sbjct: 425 KTERAAKKEAAFYAYKALYEHGLVNDNLLP 454
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 172/433 (39%), Gaps = 101/433 (23%)
Query: 988 LLPSIMHRLENLLVAIEL--KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+P I+ RLE LVA L L F + V + A+T Q +R E
Sbjct: 700 FIPVILDRLEAALVATRLCETVLRDIQFQDLRHV-----ITAITMPLAQAPTDYQRYEFF 754
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK+ V LF + EG LT V N+ L + A L YI F P +
Sbjct: 755 GDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRK 814
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ A P I K + S + K +ADVVEAL+GA
Sbjct: 815 WSA-----PLISEK---------------------LYASASTRSMSAKVLADVVEALIGA 848
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS------LDMATLEILL 1219
D G A + + ++E ++ + +P+S + LE +
Sbjct: 849 AYIDGGLHKAQSCIVRFLPEIELPETK-----LPRPESMPMSKDHKKPHLIQQENLENHI 903
Query: 1220 GHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LL++A HPS ++ YQRLEFLGDAVLD LI + + + + + G++T
Sbjct: 904 GYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMT 963
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLI-------FDSNVLSET-----------INNYVDY 1319
++ +VN A + + +K+ + D+ +ET + +Y+ Y
Sbjct: 964 KIKHAIVNGHLLAFLCMQ---FKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRY 1020
Query: 1320 --------MITP---SSTREVKEGPRCPKVL-----------------------GDLVES 1345
+ P SS + CP +L D+VES
Sbjct: 1021 SPSRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVES 1080
Query: 1346 SLGAILLDSGFNL 1358
+GAI +DSG +L
Sbjct: 1081 IIGAIFVDSGGDL 1093
>gi|409080003|gb|EKM80364.1| hypothetical protein AGABI1DRAFT_128037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1365
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 211/498 (42%), Gaps = 81/498 (16%)
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ-LKIIGFSKDIGS 984
L HP QP+L + N L+ + + +Y L PE C+ L + + +G
Sbjct: 888 LAHPNQPILEVMRMPAPTNYLNPPISQLELPAKTTQY---LIPECCRRLTVSASTLRMGY 944
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
LLPSI+ R++ L+ +K L + + V ++L+ A ++ ++ ERLE+
Sbjct: 945 ---LLPSIIRRIDEFLL---IKQLNAKNLNHC--VKDDLLIMATSSPLAGNDYNYERLEL 996
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGDA LKY ++F+ + EGEL R ++N L + + L YI+ +PF+
Sbjct: 997 LGDALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQLCDIVSGWGLPGYIQLKPFNIK 1056
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH---------------- 1148
+ G I ++ E T+ G DD + +R ++ +
Sbjct: 1057 SWLPPGMI---IDDRQKESTV----GGGVMDDGHLNMRPAQPNEDRIGASKRPKNKKRRL 1109
Query: 1149 ------WLHKKTIADVVEALVGA-FID---DSGFKAATAFL-------KWIGIQVEFEAS 1191
+ KT+ADV EA++GA +I DS KA A + +W + A
Sbjct: 1110 NKKTSSPIANKTVADVAEAIIGAAYISGGRDSALKATKALMIPFTDVEEWADFGRKASAP 1169
Query: 1192 QVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFL 1251
++ S M +E + G +F LL S +QRLEFL
Sbjct: 1170 RLDTGHAPEPSV--------MHFIETITGFRFQQPSLLRLTLTQNSMEMKD--HQRLEFL 1219
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GDAVLD+L+ YLY PG+L+ ++S++V+N A + V ++F+ +V +
Sbjct: 1220 GDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLHRFV----HVRQQ 1275
Query: 1312 TINNYVDY------MITPSSTREVKEGPR---------CPKVLGDLVESSLGAILLDSGF 1356
DY ++ KE R PKVL D++ES +GA + F
Sbjct: 1276 QKQVVWDYEKALRGREAAETSSTSKEAARVTYFWMDLDVPKVLSDVIESIIGAAYISDDF 1335
Query: 1357 NLNTVWKIMLSFLDPILK 1374
+ V I L P +
Sbjct: 1336 SQAGVEVIFDKMLLPFYQ 1353
Score = 42.4 bits (98), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 406 SKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN-A 463
S K + L+ L + L + + I+FV + + A+ L ++ ++ R FL ++
Sbjct: 363 SHKFILLVQQLEAHQILGDNFRGIIFVQKRIVAQLLVALIH----ISMPRLQFLRPISLT 418
Query: 464 GLKSMSRN-AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
+ +S + A + + ++F SGE NLL+ATK E+ + +VI FD+ E+ S +R
Sbjct: 419 NYRVLSDSEAFERMTQQFVSGEYNLLIATKSFEDA-GLPKAPVVILFDVFESQISRAYTR 477
Query: 523 GRARMPQSEYAFLVDSGN--------QRELD--LIKNFSK-EEDRMNR-------EIMDR 564
A + +++ GN LD +I+ + E D NR E D
Sbjct: 478 RCASVQGGYLIHMLEQGNSLHHYALSHSALDPEMIRWATTLENDYFNRAPPQPPQESNDP 537
Query: 565 TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHD-------EFFNPKPKFYY 617
SSD+ + + + +G I HRY ++ +F + K +
Sbjct: 538 YSSDSEDDRDLEVIQDPITGHHIRKNQSTIAFHRYAARADAQTKCEDLFKFVSQKSTYSE 597
Query: 618 FDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
+ C I L A P+ + G + A+K+AC A L G L+
Sbjct: 598 WR------CRINL-AGTPVDGVSGPAAPTKALARKEACYIACLRLQHFGLLD 642
>gi|440893954|gb|ELR46543.1| Putative ATP-dependent RNA helicase DDX58, partial [Bos grunniens
mutus]
Length = 927
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 227/535 (42%), Gaps = 84/535 (15%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + PQ K + A V
Sbjct: 242 RNYQLELALPAQKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGRKGKVVVFAVQVP 299
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L +QQ V E G+KV G S + E+ ++ +++++ PQIL+ L
Sbjct: 300 LYEQQKSVFSEHFERFGYKV---SGISGETADNISVEQIVENNDIIILTPQILVNSLKDG 356
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ +HPY IM + + +P++ G+TAS VG
Sbjct: 357 TIPSLSIFTLMIFDECHNTN--KHHPYNMIMFHYLDQKLGGSSDSLPQVLGLTASVGVG- 413
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
A A + I L LD V + ++ E+LE V P + D +
Sbjct: 414 DAKNTAEATEYICKLCASLDTAVVTTVRDNLEELEEVVYKPQKFFRKVESRTTDRFKRII 473
Query: 287 TCSEQLAEIKREQYISALSRKLHDH---QSLRNTTKQLNRLHDSMKF----------CL- 332
S+ +AE + AL++ + + +L N ++ NR + K+ C+
Sbjct: 474 --SQLMAETE------ALAKSIFEELGTVTLENLSRIQNRNFGTQKYEQWIIAVQKACMV 525
Query: 333 -------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC 385
E +C AL ++ S + LI E + D+L + V AA
Sbjct: 526 FQMPDKEEESRICKAL---FLYTSHLRKYNDALIINEDARMKDALNYLKNFFKNVRAA-- 580
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGI------------------LSTFRLQQHMKC 427
D I DL+ F +KLL L GI + L +
Sbjct: 581 GFDAIEQDLT-------QRFEEKLLELEGISMDPSNENAKLKDLCFILQEEYHLNPETRT 633
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN--AMKSILEKFRSG-E 484
I+FV AL ++ L+ + L G ++M A K L+ FR+ +
Sbjct: 634 ILFVKTRALVDALKNWIEENPKLSFLKPGILTGRGRTNQTMGMTLPAQKCALDAFRTNRD 693
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
+L+AT V +EG+DI C LVI ++ V IQ+RGR R S+ FL+ S
Sbjct: 694 SKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK-CFLLTSN 747
>gi|302412697|ref|XP_003004181.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356757|gb|EEY19185.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 1240
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 232/531 (43%), Gaps = 74/531 (13%)
Query: 202 IMKDFYKP---DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DA 257
IM +FY P + VP + G+TASP++ ++ L + + +LE LD+ +
Sbjct: 2 IMMNFYHPRKQSALWVPHVLGLTASPIM------RSRL-EGLEALERTLDSVCVTPRLHR 54
Query: 258 EDLESFVSSPVVRVYQY-------GPVINDTSSSYVTCSEQLAEIKREQYISALSRK--- 307
+DL + V P V Y GP S C +I+++ +I L K
Sbjct: 55 DDLMTHVKRPTVSYVHYETTDAKGGPTPVSILSLREACRNM--DIRQDPFILHLRDKGTD 112
Query: 308 ---------LHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNEL 358
L H++ + +Q+ + L +LG A + + ++S + L
Sbjct: 113 RARRELIKVLTSHETY--SQQQMKSFFNQSLRVLRDLGPWAAEYYIWKVIS------DFL 164
Query: 359 IEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILST 418
E + D + ++ ++ + A I R+ I+ + +L S K + LI +S+
Sbjct: 165 AITEAS--DHRMNQWKTEEKQYLANILRQISISE--PQVSMLSTHNTSNKFMMLIEHMSS 220
Query: 419 FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG----------LKSM 468
+ I+FV TA L++++++ + + VGV G + +
Sbjct: 221 -KATDGTAGIIFVKERSTAAMLAHVIESHPLTPN--MYSSVGVVVGTSNHLVRKKDMWDL 277
Query: 469 SRNAMKS-ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
SR A ++ L +FRSG LNLL+AT V EEG+D+ C LVI FD PE + +F+Q RGRAR
Sbjct: 278 SRAAHETEPLLQFRSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRGRARK 337
Query: 528 PQSEYAFLVDSG-----NQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDS 582
S L+ + ++ E++R IM++ + T EE Y V+S
Sbjct: 338 KDSSLVVLLPGTGHVPQDWESMEATMRTHYEKERREIRIMEQIEASESTEYEE--YIVES 395
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY--YFDD--LGGTICHIILPANAPI-- 636
+ A + + L +C +L EF + +P++ DD ++LP+ P
Sbjct: 396 TNARLDFENAKAHLSHFCGQLSPGEFIDKRPEYIPRVVDDEEPPSLRVTVLLPSYIPAAV 455
Query: 637 -HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP--QEDNATEDEP 684
H S A KDA +A L+ G +N+++LP +D +EP
Sbjct: 456 RHAESRRSWKSEHQASKDAAFQAYLALYDAGLVNEHMLPLTAKDIVPANEP 506
Score = 87.8 bits (216), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 169/407 (41%), Gaps = 61/407 (14%)
Query: 932 PLLRAKPLFRLRNLLHNRKLEDS--ESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
P L + R LLH + + DS ++ + Y P ++ I D +L+
Sbjct: 693 PYLALRKWPRYPALLHQKSVNDSLPQATNTKPYARVYPAPWAKIDTIPL--DHAYFGALI 750
Query: 990 PSIMHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEILGDA 1048
PSI H +E LVA +L S+S S ++L A++T+ E + ERLE LGD+
Sbjct: 751 PSISHIVEVRLVAEQL----SSSLLRDLNFSDPSLVLTAISTKGSLEATNYERLEFLGDS 806
Query: 1049 FLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFA 1108
LK + LH V+NS L + A L ++ + F
Sbjct: 807 ILKLCTTVNAAALH-------------GLVSNSRLCRAALDAGLDKFVLTENF------- 846
Query: 1109 LGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID 1168
C ++ + A D E+ KT+ADVVEAL+GA
Sbjct: 847 -------TCRTWRPIYVNGMLETGARDSGPREIST---------KTLADVVEALIGAAYI 890
Query: 1169 DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGL 1228
D G A + ++E++ + S + +S + LE L+ + F + L
Sbjct: 891 DGGLAKAIGCISIFLRELEWKLLPACQEILHSLAPPDVSLPPMLVPLEELIDYTFTKKIL 950
Query: 1229 LLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
L+++ H SF + GC +RLEFLGDA+LD ++ S+L+ P L+ R L+
Sbjct: 951 LIESITHASFTAGHVNGCLERLEFLGDAILDDIVVSHLF-------PLNLSHDRMHLLK- 1002
Query: 1287 QAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGP 1333
+V+ FL +S+ + + +D +PS T + P
Sbjct: 1003 ----TASVNGDLLGFLALESHAEEDEV--IIDVNFSPSDTDLNPQNP 1043
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+RLEFLGD++L T +++ LV+N A+D KF++
Sbjct: 797 YERLEFLGDSILKLCTTVNAAALH-------------GLVSNSRLCRAALDAGLDKFVLT 843
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGF 1356
++ YV+ M+ T GPR K L D+VE+ +GA +D G
Sbjct: 844 ENFTCRTWRPIYVNGML---ETGARDSGPREISTKTLADVVEALIGAAYIDGGL 894
>gi|448508975|ref|ZP_21615651.1| Hef nuclease [Halorubrum distributum JCM 9100]
gi|448517616|ref|ZP_21617190.1| Hef nuclease [Halorubrum distributum JCM 10118]
gi|445696998|gb|ELZ49075.1| Hef nuclease [Halorubrum distributum JCM 9100]
gi|445705831|gb|ELZ57719.1| Hef nuclease [Halorubrum distributum JCM 10118]
Length = 825
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 220/500 (44%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----QAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
+I R+ ++ +L + L NTT K LN++ +K ++N G +
Sbjct: 227 DI-RDALNEVITDRLEKLKQLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|341898470|gb|EGT54405.1| hypothetical protein CAEBREN_20187 [Caenorhabditis brenneri]
Length = 1148
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 147/572 (25%), Positives = 246/572 (43%), Gaps = 97/572 (16%)
Query: 33 VAVSGVGFGAESSVGAQKT------DKDPKQIA-RKYQLELCKKAME-ENIIVYLGTGCG 84
V GVG +++ QK D D + R YQ EL + A+E +N ++ TGCG
Sbjct: 333 VDEKGVGNTIVTNIRPQKNETAYNPDADETNLVLRVYQEELVQPALEGKNCVIVGPTGCG 392
Query: 85 KTHIAVLLIYELAHLIRKP---QKSICIFLAPTVALV-QQQAKVIEESIG-FKVRTFCGG 139
KT +A+ L HL + Q L P + LV QQ+ + ++ G F V F G
Sbjct: 393 KTEVAIYAA--LNHLRERQAAGQTGRVAMLVPKIPLVTQQKERFLQYCRGSFTVNGFF-G 449
Query: 140 SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL----IALLIFDECHHAQVKS 195
S++ S + ++ + ++VM PQIL+ L + L +++IFDE H A
Sbjct: 450 SEKSDSGEGRKDDVIESHIVVMTPQILINMLQSVRVNERLYVADFSMMIFDEVHKAT--G 507
Query: 196 NHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK---SINSLENLLDAKVY 252
NHPY I+ + P+I G+TAS V ++AQ +L + SI+++ LL+A
Sbjct: 508 NHPYV-IINQIVQEWEHDKPQIIGLTASLNV--SSTAQKDLSQMLFSIHTMLALLNAPYL 564
Query: 253 SV----EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKL 308
S ++L VS P V P +Y+ A IK + +LS+
Sbjct: 565 STIKLQASIDELNKHVSKPDDSVEVCQPTAT-ALRNYIETYLGTAHIKLCHELESLSKLR 623
Query: 309 HD---------------------HQSLRNTTKQLNRLHDS--------MKFC---LENLG 336
H+ +L+N + L +L+ + MK+ +E G
Sbjct: 624 HNCFPSNSYRRFKKLSPKFYEIYESNLQNINQDLKKLNTAEKTIAVTWMKYIRLYVEARG 683
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
+ + A + E +EA +D + Q S+ F + G+ ++
Sbjct: 684 MVDLMPARLVF---------EFMEARIRELDTG-HKLGDQFSDFFK---KYSGLEANAKS 730
Query: 397 IEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR-- 454
EP KL +++ F++ + I+FV + TA+ +S L + +R
Sbjct: 731 ----DEPMIVTKLKD--TLITQFKVTPDSRVIIFVTQRATAQRISDFLNKSHIMDQFRDP 784
Query: 455 --------CHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
F++G N G S+ + +L +F +G++ ++VAT V EEGLD+ +C
Sbjct: 785 DDDGYDEMVGFVLGTNNQGGAVQQSQQEQQKVLSRFNNGKMKVIVATSVVEEGLDVTSCN 844
Query: 505 LVIRFDLPETVA-SFIQSRGRARMPQSEYAFL 535
L+I+++ A +Q RGRAR S L
Sbjct: 845 LIIKYNCSSGSAIQLVQRRGRARAKNSRSVLL 876
>gi|299747526|ref|XP_001837094.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
gi|298407559|gb|EAU84711.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
Length = 1499
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 232/1005 (23%), Positives = 386/1005 (38%), Gaps = 163/1005 (16%)
Query: 156 YEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNH---PYAKIMKDFYKP-DI 211
++V+V Q LL +++ + ++I ++ H + + P + M+ FY P
Sbjct: 151 HDVIVTTSQTLLELFSKDLVQLRQVQVVIIEDAQHVKAHDCYSFLPIVQFMRLFYSPCPA 210
Query: 212 MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLE--SFVSSPVV 269
+ PR+F + SP + + +L LE L +K Y V + + E P
Sbjct: 211 YERPRLFSLVLSPDLAQHPFDSRSL-----KLEITLHSKTYGVTEEKRTEIIDLPDRPNE 265
Query: 270 RVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK 329
V V+ D S+S T L R AL K+ T RLH++ +
Sbjct: 266 VV-----VLYDKSASLETTFSSLPSQLR-----ALDPKM---------TVIRKRLHEA-E 305
Query: 330 FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG 389
+G C A ++ +S +E R+ + +E D + A IC +
Sbjct: 306 LIETQIGPCAA--ELWLKMSLEEFGRDMPVSSEAPKDDVGGTKLLE------ARICEK-- 355
Query: 390 IASDLSCIEVLKEPF-----FSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYI 443
+ SC P + K LR + L + + ++FV R TA AL+ I
Sbjct: 356 -IRNWSCTPPELNPSSPGFNVTHKFLRFLQALDACLDYGAQFRAVIFVQRKSTALALAEI 414
Query: 444 LQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTC 503
+ K L R F+ + KS ++ F SG NLLV T+ E LDI
Sbjct: 415 I---KHLPDGRFKFISPCSVFGKSRLETQQET-FTNFASGVYNLLVVTRSAME-LDIPKA 469
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI-- 561
+V+RFDL ++ + Q + AR +S LV+ N ++ N + + +R+
Sbjct: 470 TVVVRFDLMDSQFLYGQIKACARGRESHLIHLVERHNDSHRRILSNAASDAERLFEWFDG 529
Query: 562 -------------MDRTSSDAFTCSEERIYKVDSSGACISAGY-----GVSLLHRYCSKL 603
+ +S ++ S+E I K D A + G + L ++ S L
Sbjct: 530 LRDPEGLVVPPANLKESSMSYYSESDEDIDKPDYVSAATTGGRLYPQDAIVTLVKFASYL 589
Query: 604 PHDEFFNPKPKFYYFDDLGGT-------ICHIILPANAPIHQIVGTPQSSMEAAKKDACL 656
+ + + + C I LP P+ +V P+ + +++ A
Sbjct: 590 REQGYLEAGHSLFEYQSIPANPGQPLQFACKISLPGT-PVDGMVSAPEMTKTISRRAAAF 648
Query: 657 KAIEDLHKLGALNDY-----------LLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHE 705
A + L LG L DY L P N TE + + GS G +
Sbjct: 649 SACKRLASLGLL-DYRIVPLPSTPQVLGPSATNPTEKGTRRYFRKQPEFWKHGSTGPV-S 706
Query: 706 MLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHL 765
+L P V+ + P+ L + Q +P F LF + +KV H
Sbjct: 707 VLHPMVICVEGNAAFGPLLL--FTRQPMPS-----MPSFNLF------SNGDPVKVAFH- 752
Query: 766 ARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLP 825
R K P + F +K+ L++ P+ + Y + S +
Sbjct: 753 ---RGSPFKPEPEEMDIIYGFTLRLVKMCLNKPVT----CPVNEATYFFGALSRSWAPRD 805
Query: 826 V--IFHKN---SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENS 880
IF ++ +DW+++ R S + ++P S+ D++
Sbjct: 806 TQDIFRRDIAKDIDWELMSR------------SATKWAVPI--------TISAAPDMQED 845
Query: 881 LVYATHKKWFYLVT---NIVFEKNGYSPY-KDSDSSSHVDHLISSYGIHLKHPKQPLLRA 936
L A + F T ++V + +P K DS IS + LK P R
Sbjct: 846 LADAVIQDRFLEFTRRYHVVKLRQDMTPMSKPVDSKREQGTKISQF---LKSASSPPWRI 902
Query: 937 KPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRL 996
+ R H K + + +L PELC I S + + L+PSI+ +L
Sbjct: 903 ISIRRTEKEGHQTKGQQNA---------NLIPELCAKCTIPAS--MFRTSYLIPSILWKL 951
Query: 997 ENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGR 1056
++L V EL + F + A + E+L A TT + + ERLE+LGDAFLKY
Sbjct: 952 DHLFVVKEL----NMQFFDNA-IDEELLYMATTTVSAEMEHNYERLELLGDAFLKYLASV 1006
Query: 1057 HLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
+F+++ T +EG L R ++N LL A + L YI +PF
Sbjct: 1007 VVFVMNPTQNEGSLHVARQRLISNKALLACATQVGLPAYICSKPF 1051
Score = 103 bits (257), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 144/327 (44%), Gaps = 36/327 (11%)
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWI-----GIQVEFEASQVTNICISSKSFLPL 1206
KK IADV EA++GA G + A K + GI + I ++ +
Sbjct: 1147 KKAIADVTEAIIGAAYVSGGRETALDVAKALSIPIPGINTWSDLGMQVVIPFTTDAIELR 1206
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSY 1263
S++ +E ++GH+F LL Q H S + G Y+RLEF+GDA+LD+++ +
Sbjct: 1207 PGSIE--AVEGIIGHRFQQPHLLAQILTHTSVH--GSKVLTYERLEFIGDAILDFMVIRH 1262
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV------ 1317
++ L PG LT L+ +V N A V + YK L+F S LS I +Y
Sbjct: 1263 IFDRERTLSPGGLTMLKGAMVANSTLATVCILSGIYKHLVFGSYQLSSAIEDYAEAINER 1322
Query: 1318 ---DYMITPSSTR---EVKEGPRCPKVLGDLVESSLGAILLDSGF-NLNTVW---KIMLS 1367
+Y + R + PK L D++ES +GA+ + F + T K++
Sbjct: 1323 ADKEYALAEQENRMPGQFWPDIEPPKALSDVIESIIGALYISDNFCPVGTEAFFDKVLRP 1382
Query: 1368 FLDPILKFSNLQLNPIRELLELCNSY---DLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS 1424
F D + L +P + L E ++ L L +KGGK E V +
Sbjct: 1383 FFDKHISLRTLTHHPTKTLFEYIQAHGCQQLKLSKGPQQKGGKMSCEILVHET-----VC 1437
Query: 1425 ACATNLSRKEAIRIASQQLFSKLKAAG 1451
A A+++S A R AS + + K G
Sbjct: 1438 ASASDVSLSVAAREASTRALDRFKEDG 1464
>gi|76624102|ref|XP_580928.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1 [Bos
taurus]
gi|297477666|ref|XP_002689526.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Bos taurus]
gi|296484925|tpg|DAA27040.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Bos taurus]
Length = 942
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 227/535 (42%), Gaps = 84/535 (15%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + PQ K + A V
Sbjct: 242 RNYQLELALPAQKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGRKGKVVVFAVQVP 299
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
L +QQ V E G+KV G S + E+ ++ +++++ PQIL+ L
Sbjct: 300 LYEQQKSVFSEYFERFGYKV---SGISGETADNISVEQIVENNDIIILTPQILVNSLKDG 356
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ +HPY IM + + +P++ G+TAS VG
Sbjct: 357 TIPSLSIFTLMIFDECHNTN--KHHPYNMIMFHYLDQKLGGSSDSLPQVIGLTASVGVG- 413
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
A A + I L LD V + ++ E+LE V P + D +
Sbjct: 414 DAKNTAEATEYICKLCASLDTAVVTTVRDNLEELEEVVYKPQKFFRKVESRTTDRFKRII 473
Query: 287 TCSEQLAEIKREQYISALSRKLHDH---QSLRNTTKQLNRLHDSMKF----------CL- 332
S+ +AE + AL++ + + +L N ++ NR + K+ C+
Sbjct: 474 --SQLMAETE------ALAKSIFEELGTVTLENLSRIQNRNFGTQKYEQWIIAVQKACMV 525
Query: 333 -------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAIC 385
E +C AL ++ S + LI E + D+L + V AA
Sbjct: 526 FQMPDKEEESRICKAL---FLYTSHLRKYNDALIINEDARMKDALNYLKNFFKNVRAA-- 580
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGI------------------LSTFRLQQHMKC 427
D I DL+ F +KLL L GI + L +
Sbjct: 581 GFDAIEQDLT-------QRFEEKLLELEGISMDPSNENAKLKDLCFILQEEYHLNPETRT 633
Query: 428 IVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN--AMKSILEKFRSG-E 484
I+FV AL ++ L+ + L G ++M A K L+ FR+ +
Sbjct: 634 ILFVKTRALVDALKNWIEENPKLSFLKPGILTGRGRTNQTMGMTLPAQKCALDAFRTNRD 693
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
+L+AT V +EG+DI C LVI ++ V IQ+RGR R S+ FL+ S
Sbjct: 694 SKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK-CFLLTSN 747
>gi|389747383|gb|EIM88562.1| hypothetical protein STEHIDRAFT_155914 [Stereum hirsutum FP-91666
SS1]
Length = 1722
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 35/323 (10%)
Query: 1145 KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
+G HWL KT+ADV EA+VGA G +AA K + I V + ++ K+
Sbjct: 1315 QGIHWLGDKTVADVAEAIVGAAYVTGGREAALKASKALCIAVP-RVDRWSDF--GRKALA 1371
Query: 1205 P---LSASLDMATLEI---LLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRLEFLGDAVLD 1257
P ++A L ++E +LGH+F LL QA H S Y+RLEF+GDA+LD
Sbjct: 1372 PPPDVTARLRAGSIEAVEAILGHKFERPHLLAQALTHGSIQGYEITSYERLEFIGDAILD 1431
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+++ ++Y KL PG +T L+ +V+N A A V + ++L+F++ VL+ I Y
Sbjct: 1432 FMVIRHVYDRDTKLSPGAMTLLKGAMVSNSALAAVCIWAGLDEYLMFEAPVLAHNIRAYA 1491
Query: 1318 ---------DYMITPSSTREVKE---GPRCPKVLGDLVESSLGAILLDSGFNLNTVW--- 1362
+Y + R + PK L D+VES +GA + F+ V
Sbjct: 1492 QKLREKQKEEYALAQQEGRSPGQYWLETEPPKALSDVVESIIGATYISDNFSPVGVEKVF 1551
Query: 1363 -KIMLSFLDPILKFSNLQLNPIRELLEL-----CNSYDLDLQFPSLKKGGKFLAEAKVTG 1416
KI+ F D + L +P + L EL C+ +++ + + G + A V
Sbjct: 1552 DKILKPFYDKHITLQTLSHHPTKILFELFQAQGCSQFEITRRIQT--DGLRQTARCDVIV 1609
Query: 1417 KDKDVFISACATNLSRKEAIRIA 1439
DV +++ N S A R++
Sbjct: 1610 --HDVILASAEDNTSALAAKRVS 1630
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 138/621 (22%), Positives = 238/621 (38%), Gaps = 110/621 (17%)
Query: 107 ICIFLAPTVALVQQQ---AKVIEESIGFKVRTFCG-GSKRLKSHCDWEKEIDQYEVLVMI 162
I +FL +L Q A+ + S ++ ++ G + ++ W+ + +VLV+
Sbjct: 184 IALFLVEGESLETQPHVYARSLAASTNLRIESYSSSGDEDTQASNTWQDAL-TLDVLVLS 242
Query: 163 PQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-PRIFGMT 221
P LL L + + + + + + HP ++M +FY P + PRI
Sbjct: 243 PMHLLELLRTGIVDLAQLHTIYLRDARPIKDNDLHPMNRVMAEFYMPAEENLRPRIV--- 299
Query: 222 ASPVVGKGASAQANLP--KSINSLENLLDAKVYSVEDAEDLESFV------SSPVVRVYQ 273
A +LP + LE +L +KV V D D+ ++ + +V Y+
Sbjct: 300 --------ACLPEHLPFDARMLKLEQILCSKVCGVSD--DIREYILAMPDRPTELVVFYE 349
Query: 274 YGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE 333
+ SY QL I E+ I RL + + L
Sbjct: 350 RA-----SKYSYTLLYRQLRNIDPEESI-------------------FPRLFSAARHTLV 385
Query: 334 NLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQ--ASEVFAAICRRDGIA 391
+G + D R L E E + + + + E AA+ RD I
Sbjct: 386 EVGPAAS----------DLVWRRALPEIEMTSAVNDDDEEEDEILSPEAEAALRIRDTIK 435
Query: 392 SDLSCIEVLKEPF----FSKKLLRLIGILSTFR-LQQHMKCIVFVNRIVTARALSYILQN 446
+ + + L K L+L+ +L + R + IVFV R A + +L+
Sbjct: 436 NWVFAMPNLDPSSRGFNVMPKFLKLVHVLRSCRAYGDAFRGIVFVQRRAVALVMVDLLRT 495
Query: 447 LKFLASWRCHFLVG-VNAG-LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
L + R H LVG N G L+S + I++ F G NLL+ATK GE+ +D+
Sbjct: 496 LD-MGYLRPHALVGHGNYGPLQSET-----EIVQAFGMGTYNLLIATKCGED-IDLPRAS 548
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN------ 558
LV+R+DL E+ S+ SR R R +S ++ GN ++ + ++ M+
Sbjct: 549 LVVRYDLFESQVSYGYSRARTRGRESHLVHMIQRGNDTHRRMLTHLTQLSRPMHLWAEKV 608
Query: 559 -------------REIMDRTSSDAFTCSEERIYKVD-SSGACISAGYGVSLLHRYCSK-- 602
E D SD+ E Y D ++ I S++++ +
Sbjct: 609 AAGPEGAVPPTILHETHDPYLSDSEDEDEPDSYIKDPTTSGRIRLQDATSVIYQVAASAR 668
Query: 603 -LPHDEF-FNPKPKFYYFDDLGGT------ICHIILPANAPIHQIVGTPQSSMEAAKKDA 654
+ D + P + F+++ +C + LP I G P SS A++ A
Sbjct: 669 GVTTDAVEYQP---LFGFEEVATNSAYPRVVCTVTLPEGPAIRTFRGGPSSSFSQARRTA 725
Query: 655 CLKAIEDLHKLGALNDYLLPQ 675
C + L G L+ + PQ
Sbjct: 726 CFETCSGLFHAGLLDYHFFPQ 746
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
L PELC K + ++L LLPSI R+E+LL+ EL +ASF + + +S L
Sbjct: 1048 LIPELC-CKFTIAASTFRTAL-LLPSITRRIEDLLLVKEL----NASFFDHS-ISEYHLH 1100
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
A++ F ERLE+LGDA+LKY +LF+ + + EG L R ++N LL
Sbjct: 1101 AAISAPSASVEFDYERLELLGDAYLKYLSSIYLFVTNPSQHEGALHSARLRIISNKALLH 1160
Query: 1086 LAARNNLQVYIRDQPF 1101
A L +++ + F
Sbjct: 1161 NADAAGLPPFVQAKTF 1176
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 1023 MLLKALTTEKCQ--ERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
+L +ALT Q E S ERLE +GDA L + V RH++ + G +T + V+N
Sbjct: 1401 LLAQALTHGSIQGYEITSYERLEFIGDAILDFMVIRHVYDRDTKLSPGAMTLLKGAMVSN 1460
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
S L + L Y+ + P + ++ K+ E +Q +GR+P
Sbjct: 1461 SALAAVCIWAGLDEYLMFEA--PVLAHNIRAYAQKLREKQKEEYALAQQEGRSP------ 1512
Query: 1141 VRCSKGHHWLHK---KTIADVVEALVGA-FIDDS 1170
G +WL K ++DVVE+++GA +I D+
Sbjct: 1513 -----GQYWLETEPPKALSDVVESIIGATYISDN 1541
>gi|395855808|ref|XP_003800341.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1
[Otolemur garnettii]
Length = 926
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 236/543 (43%), Gaps = 58/543 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL A + +N I+ TGCGKT +++L+ + + Q+ +F A + +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEDHLKKFSQGQRRKVVFFANQIPVY 304
Query: 119 QQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E +G+KV G + + E+ ++ +++ + PQIL+ L + I
Sbjct: 305 EQQKSVFSKYFERLGYKVAGISGAT---AENAPVEQIVENNDIIFLTPQILVNNLKNGTI 361
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ HPY IM ++ + +P++ GMTAS VG
Sbjct: 362 PSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSDPLPQVIGMTASVGVGDAK 419
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVTC- 288
+ + +L +++ +V+D E+LE V P +Y + ++ C
Sbjct: 420 NTDEAMDYICRLCASLDVSEIVTVKDNLEELEQIVYKP----QKYFRKVESRTTDPFKCI 475
Query: 289 -SEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL--------ENL 335
SE + E E ++ +L ++N T K + K C E
Sbjct: 476 ISELMRET--ESLAKSICGELETLSPIQNREFGTQKYEQWISTVQKACTVFRLPDRDEES 533
Query: 336 GVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA--------ICRR 387
+C AL ++ S + LI E + D+L S V AA + RR
Sbjct: 534 RICKAL---FLYTSHLRKYNDALIINEHARMKDALDYLKDFFSNVRAAGFDETEQDLTRR 590
Query: 388 -DGIASDLSCIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYIL 444
+ +L I V +P KL L IL + L + I+FV AL +
Sbjct: 591 FEEKLQELETISV--DPNNENPKLEDLCFILQEEYHLNPETRTILFVKTRALVDALKKWI 648
Query: 445 QNLKFLASWRCHFLVG---VNAGLKSMSRNAMKSILEKF-RSGELNLLVATKVGEEGLDI 500
+ L + L G N + M+ A K +L F +G N+L+AT V +EG+DI
Sbjct: 649 EGNSRLNFLKPDILTGRCKTNQNI-GMTLPAQKCVLNTFGTNGANNILIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE 560
C LVI ++ V IQ+RGR R S+ L + + E + I N KE+ MN
Sbjct: 708 VQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNADVIEKEKI-NLYKEK-MMNDS 765
Query: 561 IMD 563
I++
Sbjct: 766 ILN 768
>gi|125586950|gb|EAZ27614.1| hypothetical protein OsJ_11558 [Oryza sativa Japonica Group]
Length = 258
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 8/208 (3%)
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGDA+LD+L T Y YS YP P LTDLRS VNN +A+ AV K ++ S
Sbjct: 46 RLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSS 105
Query: 1307 NVLSETINNYVD----YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
+ L ++ Y++ PS E G PKVLGD++ES GAI LDS + VW
Sbjct: 106 SELHRKMSYYLEEFGQSFTGPSYGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVW 163
Query: 1363 KIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVF 1422
+ M L+P+ ++ +P++ L E C+ + + G A+V K +
Sbjct: 164 RSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARV--KAGETT 221
Query: 1423 ISACATNLSRKEAIRIASQQLFSKLKAA 1450
SA + + A ++AS+ + L A
Sbjct: 222 YSATKSGPCKLVAKKLASKAVLKDLIAG 249
>gi|240255863|ref|NP_680697.4| protein RNAse II-like 1 [Arabidopsis thaliana]
gi|332658200|gb|AEE83600.1| protein RNAse II-like 1 [Arabidopsis thaliana]
Length = 264
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 6/190 (3%)
Query: 1210 LDMATLEILLGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVY 1268
+++ +LE +L ++F + LLL+AF S+ + Y+ LE LGD++L+ I +Y
Sbjct: 27 MEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLY 86
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-PSSTR 1327
PK PG LT LR++ V+ + A VAV+ Y +L +L E I +V+ M P +
Sbjct: 87 PKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYPLHSN 146
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELL 1387
+ + PKVL D+VES++GAI +D + TVWK++ L+PI+ ++ +P+ EL
Sbjct: 147 GLL---KVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKMKSHPMTELN 202
Query: 1388 ELCNSYDLDL 1397
E+C +L L
Sbjct: 203 EMCQKRNLKL 212
>gi|328849595|gb|EGF98772.1| hypothetical protein MELLADRAFT_79606 [Melampsora larici-populina
98AG31]
Length = 1540
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 125/262 (47%), Gaps = 33/262 (12%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR- 101
ES G +K P R YQ EL ++A NII+ TG GKT +AVLL+ +A +
Sbjct: 18 ESEQGVLSGNKCP----RLYQEELLEEAKRRNIIIRADTGTGKTLVAVLLMDWMAVQPKG 73
Query: 102 -KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVL 159
+ +I FL PT LVQQQA I +VR + G L + W ++ Q +V+
Sbjct: 74 DDQEHTIQAFLVPTRPLVQQQASAIRSGTTLRVREYTGDLQPELWNVEKWHSDLKQTDVI 133
Query: 160 VMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK-----PDIMKV 214
V QI L F +E ++LL+FDE HH + NH Y +IM+ Y+ PD +V
Sbjct: 134 VCTAQIFYDILSKGFWTLENVSLLVFDEAHHC--RKNHIYNQIMQVHYRRLDRDPDHRRV 191
Query: 215 PRIFGMTASPVVGKGASAQAN------------------LPKSINSLENLLDAKVYSVE- 255
P+I G+TASP+ + +A + SL++ L A++Y ++
Sbjct: 192 PKILGLTASPIWDCKSMVRAEKDIRHVSSNRLKVSYLKLITFWFRSLQSDLSAQLYEIKV 251
Query: 256 DAEDLESFVSSPVVRVYQYGPV 277
D+E + + P V + P
Sbjct: 252 RRHDVEKYANKPKEEVVYFTPA 273
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 193/436 (44%), Gaps = 70/436 (16%)
Query: 986 LSLLPSIMHRLEN------LLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSL 1039
S +P++ RL + LL I++ H VS ++ ALT +
Sbjct: 906 FSFIPALTRRLHDASQVQALLKKIDVPH-----------VSLDLATMALTQPGIDVPWDY 954
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+ LE +GDAFLK A H++L H EG+++ RS +V+N L + + L Y+
Sbjct: 955 QTLETVGDAFLKLATSVHVYLSHTKKGEGDMSALRSKSVDNEYLRSKSLQAGLGSYVLSS 1014
Query: 1100 PFDPCQFFALG-RRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ F A P + + E +R I ++ ++D+
Sbjct: 1015 RYRTDTFRAAHLDDGPLLPTGEVQRKIP-------------------------RRVLSDI 1049
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVT----NICISSKSFLPLSASLDMA- 1213
VEAL+GA + G + A LK IG +++ VT C + P +AS
Sbjct: 1050 VEALLGAGLLSGGIQTA---LK-IGTELDLCFGGVTPWTERPCKALDEPYPDAASSQWTK 1105
Query: 1214 ---TLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLYSVYP 1269
L+ +G++F LL+QA H S + L CY+R E+LGDA++D IT + Y +
Sbjct: 1106 SHTALQHKIGYEFKQPLLLMQALTHRSADSFLTNCYEREEWLGDAIVDLWITEHCYRRFS 1165
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQ-SFYKFLIFDSNVLSETINNY---VDYMITPSS 1325
QLT R+ LV N + +++ + +K + DS + ++ ++ I S
Sbjct: 1166 DSTAAQLTFTRASLVTNASLGYLSLKKLGLHKMIQHDSRHFEKACDDALRDIESFIEVGS 1225
Query: 1326 TRE------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKF--SN 1377
+ + P PK+LGD +E+ +GAI +D G +L+ ++ + + +L +
Sbjct: 1226 FYDNLTNSFIVFDP--PKILGDALEAIVGAIFIDCGLHLSVAYRSLDKIFEDVLPRLKQD 1283
Query: 1378 LQLNPIRELLELCNSY 1393
+PI LL ++Y
Sbjct: 1284 EPRDPISLLLRTRDTY 1299
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 55/294 (18%)
Query: 406 SKKLLRLIGILSTFRLQQHMKC-----IVFVNRIVTARALSYILQNLKFLASW-RCHFLV 459
+ K L+ ILS + ++MK I+FV R A+ L+ ++ L + + L
Sbjct: 372 TPKFQALVKILSKY---ENMKAEDFHAIIFVERRTHAQLLNSLISRCAKLKGFIKPGALT 428
Query: 460 G------VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPE 513
G + G + M + +EKFR+ E+NL +AT V EEGLD + C LVIRFD
Sbjct: 429 GHGGTVASSGGNRGMDSKSQNQTVEKFRNREINLAIATNVAEEGLDFRACRLVIRFD--- 485
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS 573
+ ++ R ++ + + ED EI SDA S
Sbjct: 486 DITTWKGEELRTQL----------------------YGRPEDE---EI-----SDAELES 515
Query: 574 EERIYKV--DSSGACISAGYGVSLLHRYCSKLPHDEFFNP-KPKFYYFDDLGGTICHIIL 630
++ D A ++ VSLL+ C LPHDE+ KPKF GG +C + L
Sbjct: 516 TPQLINSLGDGKDAILTHNASVSLLNEVCQLLPHDEYAEILKPKFEDIQRSGGFVCRVTL 575
Query: 631 P---ANAPIHQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNAT 680
P A +P ++ + P + AK+ AC A L G L+++ +P + T
Sbjct: 576 PPMAALSPSERVFESEPFTKKNKAKQSACFIACRALRSAGVLDEHFMPLRERHT 629
>gi|38174359|gb|AAH61198.1| Dicer1 protein, partial [Mus musculus]
Length = 421
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 118/245 (48%), Gaps = 19/245 (7%)
Query: 49 QKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQK 105
Q+ D RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P
Sbjct: 24 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 83
Query: 106 SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLV 160
+FL + V QQ + KV G L+ + W K E +++VL+
Sbjct: 84 KRTVFLVNSANQVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLI 139
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGM 220
M + L L + ++ + I LL+FDECH A + +HPY +IMK PRI G+
Sbjct: 140 MTCYVALTVLKNGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGL 195
Query: 221 TASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND 280
TAS + GK + L + I LE +L + + D L+ + S P V GP D
Sbjct: 196 TASILNGKCDPEE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGP-FTD 252
Query: 281 TSSSY 285
S Y
Sbjct: 253 RSGLY 257
>gi|426198231|gb|EKV48157.1| hypothetical protein AGABI2DRAFT_202619 [Agaricus bisporus var.
bisporus H97]
Length = 1179
Score = 112 bits (279), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 211/498 (42%), Gaps = 81/498 (16%)
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQ-LKIIGFSKDIGS 984
L HP QP+L + N L N + E F L PE C+ L + + +G
Sbjct: 702 LAHPNQPILEVMRMPAPTNYL-NPPISQLELPAKTTQF--LIPECCRRLTVSASTLRMGY 758
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
LLPSI+ R++ L+ +K L + + V ++L+ A ++ ++ ERLE+
Sbjct: 759 ---LLPSIIRRIDEFLL---IKQLNAKNLNHC--VKDDLLIMATSSPLAGNDYNYERLEL 810
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGDA LKY ++F+ + EGEL R ++N L + + L YI+ +PF+
Sbjct: 811 LGDALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQLCDIVSGWGLPGYIQLKPFNIK 870
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHH---------------- 1148
+ G I ++ E T+ G DD + ++R ++ +
Sbjct: 871 SWLPPGMT---IDDRQKESTV----GGGVVDDGHLDMRPAQPNEDRIGASKRPKNKKRRL 923
Query: 1149 ------WLHKKTIADVVEALVGA-FID---DSGFKAATAFL-------KWIGIQVEFEAS 1191
+ KT+ADV EA++GA +I DS KA A + +W + A
Sbjct: 924 NKKTLSPIANKTVADVAEAIIGAAYISGGRDSALKATKALMIPFADVEEWADFGRKASAP 983
Query: 1192 QVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFL 1251
+ S M +E + G +F LL S +QRLEFL
Sbjct: 984 RHDTGHAPEPSV--------MHFIETITGFRFQQPSLLRLTLTQNSMEMKD--HQRLEFL 1033
Query: 1252 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSE 1311
GDAVLD+L+ YLY PG+L+ ++S++V+N A + V ++F+ +V +
Sbjct: 1034 GDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLHRFV----HVRQQ 1089
Query: 1312 TINNYVDY---------MITPSSTREVKEGP------RCPKVLGDLVESSLGAILLDSGF 1356
DY T S+++E PKVL D++ES +GA + F
Sbjct: 1090 QKQVVWDYEKALRGREAAETASTSKEAARVTYFWMDLDVPKVLSDVIESIIGAAYISDDF 1149
Query: 1357 NLNTVWKIMLSFLDPILK 1374
+ V I L P +
Sbjct: 1150 SQAGVEVIFDQMLLPFYQ 1167
>gi|116283663|gb|AAH19805.1| Dicer1 protein [Mus musculus]
Length = 427
Score = 112 bits (279), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 118/245 (48%), Gaps = 19/245 (7%)
Query: 49 QKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQK 105
Q+ D RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P
Sbjct: 34 QEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHA 93
Query: 106 SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLV 160
+FL + V QQ + KV G L+ + W K E +++VL+
Sbjct: 94 KRTVFLVNSANQVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLI 149
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGM 220
M + L L + ++ + I LL+FDECH A + +HPY +IMK PRI G+
Sbjct: 150 MTCYVALTVLKNGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGL 205
Query: 221 TASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND 280
TAS + GK + L + I LE +L + + D L+ + S P V GP D
Sbjct: 206 TASILNGKCDPEE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGP-FTD 262
Query: 281 TSSSY 285
S Y
Sbjct: 263 RSGLY 267
>gi|13542321|ref|NP_112009.1| RNA helicase (ERCC4-like) [Thermoplasma volcanium GSS1]
gi|14325756|dbj|BAB60659.1| translation initiation factor eIF4A [Thermoplasma volcanium GSS1]
Length = 513
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 235/541 (43%), Gaps = 72/541 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+ + K ++++N ++ + TG GKT IA +LI ++ +KS IFLAPT LV
Sbjct: 8 REYQINVYKNSIDKNTLIVMPTGLGKTLIAAMLI---EKFFKENKKS--IFLAPTKPLVL 62
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQY--EVLVMIPQILLYCLYHRFIKM 177
Q + + +G C + + S E+E+ ++ V PQ++L + I +
Sbjct: 63 QHMATLVKVLGLNNNEICAFTGEVDSQ---ERELRWVTGKIFVSTPQVVLNDMKSGIIDI 119
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVGKGASAQAN 235
L++FDE H A N+ Y I +F YK + I G+TASP KG +
Sbjct: 120 TRFDLIVFDEAHRAV--GNYAYVDIASEFLEYKKKL-----IIGLTASPGGEKGRFQE-- 170
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVY------QYGPVINDTSSSYVTCS 289
+ K++ +EN+ V E ED+ ++ S + + Q G + + S+ +
Sbjct: 171 IVKNL-GIENV----VVKTEKDEDVRKYIKSIEMHLIKLKEPDQCGAIKDLLKSALDSVL 225
Query: 290 EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLS 349
+ L ++Q I + +S++N +NR + + A+ YI+
Sbjct: 226 KPL----KDQGIKVGRTRKDMAESIQNL---INRAKEDRSLFPLVRHLTAAIRIDYII-- 276
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
E IE +G D ++ E + I S ++ L + F K +
Sbjct: 277 -------EYIETQGL---DVAYQYVKDMEE-----SQDQSIKRAYSMMKSLDD--FRKAI 319
Query: 410 LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLK--- 466
+ +L +R + MK + V A + + + + + +L + +K
Sbjct: 320 ENMKNVLPGYRNPKMMKVLEICQEKVIAGERAIVFTHFRATSDMLLAYLKNSSDKIKPVR 379
Query: 467 -----------SMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+S+ + I+E+FR+G N+L+AT + EEGLDI +V+ ++ +
Sbjct: 380 FIGQADRGTDVGLSQEEQRQIIEQFRNGTYNVLIATSIAEEGLDIPDTDVVVFYEAVPSE 439
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEE 575
FIQ +GR +S +++ N R++ K+ MNR IM+ +T +E
Sbjct: 440 IRFIQRKGRTGRSRSGEVYILVYENSRDMAYYYRSLKKVSMMNRNIMEYRDEHPYTKNER 499
Query: 576 R 576
+
Sbjct: 500 Q 500
>gi|383319514|ref|YP_005380355.1| ERCC4-like helicase [Methanocella conradii HZ254]
gi|379320884|gb|AFC99836.1| ERCC4-like helicase [Methanocella conradii HZ254]
Length = 765
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 233/529 (44%), Gaps = 69/529 (13%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQL L + A+E++ ++ L TG GKT IA+L++ E + +K + L+PT LV
Sbjct: 32 SRAYQLTLARNALEKSSLIVLPTGLGKTIIALLVMLE------RLEKGKALMLSPTKPLV 85
Query: 119 QQQAKVIEESIGF--KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
+Q A ++ ++ +V F G K W+ ++V PQ++ L +
Sbjct: 86 EQHAAFLKRTLTIPEQVAVFTGSVAPSKRVDIWKGS----RIIVSTPQVIENDLLTKRFD 141
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
++ ++L++FDE H A ++ Y I K + + P + G+TASP +
Sbjct: 142 LKDVSLIVFDEAHRAT--GDYAYVYIAKKYVEQSAN--PLVLGITASP---------GST 188
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
P+ IN ++ L + ++ +D P V Y Y D V ++ AEIK
Sbjct: 189 PEKINEVKQNLFIERVEIKTEKD-------PDVAPYIYE---KDVEWVRVNVPDKAAEIK 238
Query: 297 REQYISALSRKLHDHQSL------RNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
S + ++ ++L R T K+L L + ++ + G + A IL
Sbjct: 239 I-LLDSLMDDRMDRLKALGVVRESRLTKKELLMLQEKLQADISRGGSPESYRAVSILA-- 295
Query: 351 DETMRNE----LIEAEG---------NTIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
E M+ E LI+ +G D++ + S+A++ R +A +
Sbjct: 296 -EIMKIEHAVDLIQTQGVVPLKKYFERLKDEAGSKGGSKATKRLMQDAR---LAGAMRIA 351
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
+ E + ++ I +L R + IVF N TA ++ + L + R
Sbjct: 352 DTADEVNPKTEKVKEI-VLEQIRENPSSRIIVFTNFRDTA---DFVSKELAKVEGIRPVR 407
Query: 458 LVGVNAGL--KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
VG + L K +++ IL FRSGE N L+AT V EEGLDI + LVI ++ +
Sbjct: 408 FVGQASKLNDKGLTQKRQVEILNAFRSGEFNTLIATSVAEEGLDIPSTDLVIFYEPVPSE 467
Query: 516 ASFIQSRGR-ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMD 563
IQ RGR R L+ G + E + +KE+ RM R + D
Sbjct: 468 IRTIQRRGRTGRNAVGRVVVLISKGTRDEGTYRVSQAKEK-RMYRTMRD 515
>gi|240275432|gb|EER38946.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
Length = 495
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 45/333 (13%)
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF ++ DE + +R + N NL A R L ++R Q F ++ G + +
Sbjct: 7 LFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVRTQGFSRRNWYPEGIKLLQ-- 64
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI--------DD 1169
G+A + ++ L KTIAD+ EAL+GA + D
Sbjct: 65 -------------GKAKSE------SAQNKQALGDKTIADICEALIGASLLSGGKACRFD 105
Query: 1170 SGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS-LDMAT-LEILLGHQFLHRG 1227
+ KA T F+ +V S + + S + A LD+A + LG+ F +
Sbjct: 106 TAVKAVTVFVDSDNHRVSDWNSYIDLYSLPSYQIVQADAGQLDLAKQIGNRLGYHFTYPR 165
Query: 1228 LLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LL AF H S+ CYQRLEFLGD++LD + YLY YP P LT+ + +V
Sbjct: 166 LLRSAFTHASYPSAWSTVPCYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMV 225
Query: 1285 NNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM--------ITPSSTREVKEGPRCP 1336
+N+ V V +K L++ SN L I Y + + +P + + P+C
Sbjct: 226 SNKFLGAVTVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKC- 284
Query: 1337 KVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
L D++E+ +GAI +DS F+ V +L
Sbjct: 285 --LPDMLEAYIGAIFVDSNFSFEVVEDFFQRYL 315
>gi|254692316|emb|CAY86112.1| retinoic acid-inducible gene-I [Cyprinidae sp. EPC]
Length = 940
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 251/584 (42%), Gaps = 99/584 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ EL A +N I+ TGCGKT +AV + HL ++P ++ +FLA V + +
Sbjct: 257 REYQKELTDAAEGQNTIICAPTGCGKTIVAVAICEN--HLKKRPGRAKIVFLATKVDVYE 314
Query: 120 QQAKVIEESIGF-----KVRTFCGG---SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
QQ K+ +E F KV CG S RL I+ ++++V+ QIL+ L
Sbjct: 315 QQYKLFKEHFSFTDPNIKVTGMCGDMALSVRLL--------IETHDIVVLTAQILVNALQ 366
Query: 172 HRFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVV 226
+ +++++L++ DECH+ K HPY IM + + +P+I G+TAS +
Sbjct: 367 SGEVPSLDMLSLILLDECHNTTGK--HPYNNIMTRYLDTKLSSSTHSLPQIVGLTASVGI 424
Query: 227 GK---GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSS 283
G A+ N+ + +L+ + A V + ++L +FV +P ++ V T
Sbjct: 425 GTFKDRTEAENNILQLCANLDTRVIATV--TKHLDELRTFVHTP---EKEFFDVPRHTCD 479
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRN---------------TTKQLNRLHDSM 328
++ E + + I L++ ++ +SL N + Q + +M
Sbjct: 480 PFIRIIENIM-----RNIEHLAKNTYNIESLSNIQNCEYGSQKYEQWIVSVQKSCRVIAM 534
Query: 329 KFCLENLGVCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEV-FAAIC 385
K E +C L + ++ D + NE +A D L F Q F
Sbjct: 535 KNTDEERRICRDLYNYTEHLRKYNDALIINE--DARTKDSLDFLDGFFEQVRNAGFDETE 592
Query: 386 RRDGIASDLSCIEVL---KEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALS 441
RR D ++L E + KL L IL + + ++FV A A+
Sbjct: 593 RRLTALYDSQRPQLLFLATEGQQNPKLEELRFILEEEYHNNDQTRTVLFVRTRALADAMK 652
Query: 442 YILQN---LKFLASWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELN-LLVAT 491
+ + LKFL V + G KS M+ K +L+ F+S + + +L+AT
Sbjct: 653 KWIDDTDSLKFLMPG-----VLIGKGRKSNFNGSVMTPTNKKGVLDSFKSSDQSKILIAT 707
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR--------- 542
V +EG+DI C LV+ ++ V +Q RGR R Q FL+ S R
Sbjct: 708 SVADEGIDIPQCNLVLMYEYVGNVVKMVQVRGRGR-AQGSRCFLISSNKDRIMKEKMNVL 766
Query: 543 ----------ELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEER 576
EL + + S + DR+ RE D+ D + S ++
Sbjct: 767 KEKLVEEAIVELQKLPDLSYKVDRLQRE--DKARRDHVSASPQK 808
>gi|194224905|ref|XP_001497895.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Equus
caballus]
Length = 920
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 157/574 (27%), Positives = 252/574 (43%), Gaps = 80/574 (13%)
Query: 55 PKQIA----RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSI 107
P ++A R YQLEL A E +N I+ TGCGKT +++L+ HL + PQ K
Sbjct: 230 PSEVAPLKIRNYQLELALPAKEGKNTIICAPTGCGKTLVSLLICEH--HLKKFPQGRKGK 287
Query: 108 CIFLAPTVALVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQ 164
+F A + L +QQ V E G+KV G + + ++ ++ +++++ PQ
Sbjct: 288 VVFFAIHLPLYEQQKSVFSQYFERRGYKVAGISGAT---SENVVVDQIVENNDIIILTPQ 344
Query: 165 ILLYCLYHRFI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFG 219
IL+ L I + + L++FDECH+ +HPY IM ++ + +P++ G
Sbjct: 345 ILVNSLKDGTIPSLSVFTLMMFDECHNTS--KHHPYNMIMFNYLDQKLGGSSDPLPQVVG 402
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPV 277
+TAS VG + + + I L LDA V S ++ ++L V P + V
Sbjct: 403 LTASVGVGDAKNRDEAM-EHICKLCASLDASVISTVKDNLQELTEVVYKP---EKNFRKV 458
Query: 278 INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF------- 330
+ T+ + QL RE +L++ + D L N ++ NR + K+
Sbjct: 459 ESRTTDGFKCIISQLM---RE--TESLAKSIFDE--LENLSRFQNRDFGTQKYEQWIIAV 511
Query: 331 ---CL--------ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE 379
C+ E +C AL Y+ S + LI +E + D+L +
Sbjct: 512 QKACIVFQLPDKAEESRICKAL---YLYTSHLRKYNDALIISEHARMKDALDYLKDFFNN 568
Query: 380 VFAAICRRDGIASDLSCIEVLKEPFF----------SKKLLRLIGILS-TFRLQQHMKCI 428
V AA D DL+ K P + KL L IL + L + I
Sbjct: 569 VRAA--GFDETEQDLTRRFEEKLPELESVSMDPSNENPKLKDLCFILQEEYHLNPETRTI 626
Query: 429 VFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRS-GEL 485
+FV AL ++ L+ + L G + M+ A K L+ FR+ G+
Sbjct: 627 LFVKTRALVDALKKWIEENPKLSFLKPGILTGRGKTTNNTGMTLPAQKCALDAFRTNGDN 686
Query: 486 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD 545
+L+AT V +EG+DI C LVI ++ V IQ+RGR R S+ FL+ S D
Sbjct: 687 KILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRAKGSK-CFLLTSN----AD 741
Query: 546 LIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYK 579
+I+ KE+ M +E M S + +E I+K
Sbjct: 742 VIE---KEKMNMYKEKMMNDSILSLQAWDEAIFK 772
>gi|291235951|ref|XP_002737902.1| PREDICTED: Dicer Related Helicase family member (drh-1)-like
[Saccoglossus kowalevskii]
Length = 656
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 229/522 (43%), Gaps = 75/522 (14%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--------KSICIF 110
R YQ EL A + N I+ G GKTH+A+++ H + Q K +
Sbjct: 54 RGYQEELAGPAYKGLNSIICAPVGTGKTHVAMMVSKNHMHRAMEVQAAGNSSTSKGKILL 113
Query: 111 LAPTVALVQQQAKVIEESIG-FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
+ L+ Q K + + FK G + S +E ++++
Sbjct: 114 IVHMNRLLNQTYKRFKTYLPLFKTGKISGVTT---SKLTFEHLAKINDIVITTAGFFENI 170
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPV 225
L + + +L+I DECH+A NH Y +IM ++ K + ++P+I G+TA P
Sbjct: 171 LEKKTTSISAFSLIIIDECHYAM--KNHSYNRIMTEYLKIKLAGCSAQLPQIVGLTACPG 228
Query: 226 VGKGA---SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--------------- 267
G + +AQ +L K +L+ V + ++ +LE +VS P
Sbjct: 229 TGGKSQLQAAQTHLLKLCANLDAQTFVTVQNPDNKIELEKYVSKPDKFTTIAATRSPDPF 288
Query: 268 VVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDS 327
R+ + I + TC ++ E + EQ+I + RN T N+ H++
Sbjct: 289 QDRIAEIMAEIEHKTGDIETCPQRGTE-EYEQFII----------TTRNETLNGNK-HET 336
Query: 328 MKFCLENLGVCGALHASYI--------LLSGDETMRNELIEAEGNTIDDSLCR-FASQAS 378
++ C + AL S + ++ G R + + E +I+ L + F +S
Sbjct: 337 VQCCEHLIQYNKALQISSMCRMSDGLKIIDGFYNERWQRGQHETTSIEKYLYKLFRRNSS 396
Query: 379 EVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILS--TFRLQQHMKCIVFVNRIVT 436
E+F I+ D + + + K+L+L L+ ++ + ++ I+FV
Sbjct: 397 ELF-------DISED-------ENKYPNPKVLKLKENLAEEIKKMDEELRGIIFVKTRAL 442
Query: 437 ARALSYILQNLKFLASWRCHFLVGVNA-GLKSMSRNAMKSILEKFRSGELNLLVATKVGE 495
ARA+ + + K L S + LVGV + G++ M++ + L KF G LLVAT V E
Sbjct: 443 ARAIYECIVDDKTLKSLKPAILVGVKSTGVECMTQAEQDTRLRKFALGHCKLLVATSVAE 502
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
EGLDI+ C ++IR++ V S QS GRAR +S F+ D
Sbjct: 503 EGLDIKECHMLIRYNYSTNVISLRQSSGRARALESTEHFIGD 544
>gi|407917735|gb|EKG11039.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1216
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 28/303 (9%)
Query: 405 FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
S K+ LI +L ++ IVFV + T A+ ++L N L R F +G G
Sbjct: 86 LSPKMQYLIDLLLA-EWREGFTGIVFVEQRATVAAMDHVLSNHPQL---RDLFNIGTFVG 141
Query: 465 LKSMSRNA-------------MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
R + L++FR G+ NL+VAT V EEG+D+ C +VI F+
Sbjct: 142 TSVTVRRKSHLGIGDLVEVRHQQQTLDEFRDGKKNLIVATSVLEEGIDVSNCHIVICFEP 201
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGN------QRELDLIKNFSKEEDRMNREIMDRT 565
P+ + SFIQ RGRAR S++ ++ + + LDL + K R+I
Sbjct: 202 PKNLKSFIQRRGRARKQDSKFVIMLSDDSSLAQSPDKWLDLEEQMKKAYLNDLRQIQAAE 261
Query: 566 SSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF---DDLG 622
+ + + IY+ +S+GA ++ + L+ +C+ L + + +P+F + +DL
Sbjct: 262 AREQIEEGGDAIYRCESTGALLTLENAMQHLYHFCAILGGGQHVDLRPRFSFMVDENDLT 321
Query: 623 GTICHIILPANAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALNDYLLPQEDNATE 681
+ + NA + Q G E AA++DA +A LHK G +ND LLP + E
Sbjct: 322 TAVVTLPTSVNAKLRQHRGKGAWLTERAARRDAAFQAYVALHKAGLVNDNLLPLLSDP-E 380
Query: 682 DEP 684
+EP
Sbjct: 381 EEP 383
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 153/356 (42%), Gaps = 78/356 (21%)
Query: 938 PLFRLRNLLHNRKLEDSESHEL--EEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHR 995
P + R+ LH + D H + +EY LP + I G + +PSI+HR
Sbjct: 589 PFPKRRDFLH--YIRDVSQHRMYSKEYI--LPAK--DFVIDGSPASYAKFAAFIPSIIHR 642
Query: 996 LENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVG 1055
E ++ ++ L + + + + EM+L+A+T E +RLE LGD LK+
Sbjct: 643 YELFMI---VQELCNTAIKDVDFENYEMVLRAITASSTNEN-DYQRLEFLGDCILKFNTA 698
Query: 1056 RHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR 1115
L + E LT ++ V+N +L K + R L +I + F ++ PR
Sbjct: 699 VQLMAGNLHWPESYLTEKKDRVVSNGSLAKASRRAGLDRFIITRAFTGAKW------RPR 752
Query: 1116 ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA 1175
+ + + P+ + L KT+ADVVE+L+GA + G A
Sbjct: 753 YVND-----VLALAAIELPEKRD-----------LSSKTLADVVESLIGAAYIEGGMPKA 796
Query: 1176 TAFLKWIGIQVEFEASQVTNICISSK----SFLPLSAS-----------------LDMAT 1214
N+CI++ S+ PL S + +
Sbjct: 797 -------------------NLCIATLLPKLSWCPLDESRHILAKHAAEDHISAPPIHLER 837
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF----NRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
E L+G+ F ++ LLL+A HPSF + YQRLEFLGDAVLDYLI+ L++
Sbjct: 838 AEELIGYTFKNKYLLLEALTHPSFTSYRDATTSSYQRLEFLGDAVLDYLISRRLHA 893
Score = 45.1 bits (105), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
++L+A S N YQRLEFLGD +L + L + LT+ + +V+N
Sbjct: 667 MVLRAITASSTNE--NDYQRLEFLGDCILKFNTAVQLMAGNLHWPESYLTEKKDRVVSNG 724
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSL 1347
+ A + +F+I + ++ YV+ ++ ++ ++ K L D+VES +
Sbjct: 725 SLAKASRRAGLDRFIITRAFTGAKWRPRYVNDVLALAAIELPEKRDLSSKTLADVVESLI 784
Query: 1348 GAILLDSGF 1356
GA ++ G
Sbjct: 785 GAAYIEGGM 793
>gi|341890882|gb|EGT46817.1| hypothetical protein CAEBREN_28255 [Caenorhabditis brenneri]
Length = 1015
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 236/540 (43%), Gaps = 90/540 (16%)
Query: 58 IARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAP 113
+ R YQ EL + A+E +N ++ TGCGKT +A+ L HL + Q L P
Sbjct: 232 VLRVYQEELVQPALEGKNCVIVGPTGCGKTEVAIYAA--LNHLRERQAAGQTGRVAMLVP 289
Query: 114 TVALV-QQQAKVIEESIG-FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
+ LV QQ+ + ++ G F V F GS++ S + ++ + ++VM PQIL+ L
Sbjct: 290 KIPLVTQQKERFLQYCRGSFTVNGFF-GSEKSDSGEGRKDDVIESHIVVMTPQILINMLQ 348
Query: 172 HRFIKMEL----IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
L +++IFDE H A NHPY I + + + K P+I G+TAS V
Sbjct: 349 SVRANERLYVADFSMMIFDEVHKAT--GNHPYVIINQIVQEWEYDK-PQIIGLTASLNV- 404
Query: 228 KGASAQANLPK---SINSLENLLDAKVYSV----EDAEDLESFVSSPVVRVYQYGPVIND 280
++AQ +L + SI+++ LL+A S ++L VS P V P
Sbjct: 405 -SSTAQKDLSQMLFSIHTMLALLNAPYLSTIKLQASIDELNKHVSKPDDSVEVCQPTAT- 462
Query: 281 TSSSYVTCSEQLAEIKREQYISALSRKLHD---------------------HQSLRNTTK 319
+Y+ A IK + +LS+ H+ +L+N +
Sbjct: 463 ALRNYIETYLGTAHIKLCHELESLSKLRHNCFPSNSYRRFKKLSPKFYEIYESNLQNINQ 522
Query: 320 QLNRLHDS--------MKFC---LENLGVCGALHASYILLSGDETMRNELIEAEGNTIDD 368
L +L+ + MK+ +E G+ + A + E +EA +D
Sbjct: 523 DLKKLNTAEKTIAVTWMKYIRLYVEARGMVDLMPARLVF---------EFMEARIRELDK 573
Query: 369 SLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCI 428
+ Q S+ F + G+ ++ EP KL +++ F++ + I
Sbjct: 574 G-HKLGDQFSDFFK---KYSGLEANAKS----DEPMIVTKLKDT--LITQFKVTPDSRVI 623
Query: 429 VFVNRIVTARALSYILQNLKFLASWR----------CHFLVGVN--AGLKSMSRNAMKSI 476
+FV + TA+ +S L + +R F++G N G S+ + +
Sbjct: 624 IFVTQRATAQRISDFLNKSHIMDQFRDPDDDGYDEMVGFVLGTNNQGGAVQQSQQEQQKV 683
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA-SFIQSRGRARMPQSEYAFL 535
L +F +G++ ++VAT V EEGLD+ +C L+I+++ A +Q RGRAR S L
Sbjct: 684 LSRFNNGKMKVIVATSVVEEGLDVTSCNLIIKYNCSSGSAIQLVQRRGRARAKNSRSVLL 743
>gi|340054649|emb|CCC48949.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma vivax Y486]
Length = 824
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 253/558 (45%), Gaps = 79/558 (14%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAV-LLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQ EL +KA+ E+ I++L TG GKT +A ++ +L H P K + +F+ V LV Q
Sbjct: 13 YQRELYEKAVNEDAIIFLPTGAGKTVLAASVMSSKLEHY---PDKKV-VFVVSRVPLVMQ 68
Query: 121 QAKVIEESIGF--KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF---I 175
QAK ++ ++GF V T CG + L + W ++ V ++I + Y F I
Sbjct: 69 QAKTLQRAMGFGRAVATVCGAKRSLTT---WSAFMESSCVGLVIIDSIFYRWMQEFPSAI 125
Query: 176 KMELIALLIFDECHHA----------QVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASP 224
K I+L++ DE H+A + +N P + + PD +P I G+TASP
Sbjct: 126 KNN-ISLIVIDEVHNALGGYCKMIVEYIHTNAPRDRQKEAREYPDTPPTLPFILGLTASP 184
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTS- 282
V + + Q +S+ L ++ ++++ V + E+L V P+ +Y ++T+
Sbjct: 185 V--QSFTNQ----ESLFELLSITRCRIFNVVANKENLHEVVPVPMTICLEYHLPPHETAF 238
Query: 283 ----SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC 338
S + I + + + A+ + + N +Q+ K +L
Sbjct: 239 QQFMRSAIDILHNDENIGKNKLLKAIKNTIPAQAAYVNKCEQIQIAAVQGKHGDYDL--- 295
Query: 339 GALHASYILLSGDETMRN----ELIEAEGNTIDDSLCRFASQASEVFA------------ 382
A + +++L S + L +A +D S+ + EV A
Sbjct: 296 FAKNMAFVLSSFSRAVMTLDCRSLWDALKVVMDKSVFAALQSSREVAALVLPIMQGMLEL 355
Query: 383 --AICRRDG-IASDLSCIE-VLKEPFFS--KKLLRLIGILSTF--RLQQHMKCIVFVNRI 434
A+ DG I SD + ++ ++++P + ++L L +LS ++ + +
Sbjct: 356 MKAVLDNDGAIRSDQNMVQPIIRQPRLTVCSRMLFLGQVLSWIAKSAKEGEADVCGIILC 415
Query: 435 VTARALSYILQNLK----FLASWRCHFLVG-----VNAGLKSMSRNAMKSILEKFRSGEL 485
T ++ YI +K + +R ++G V+ M+ ++IL+ F++G
Sbjct: 416 DTRTSVYYICDQIKKVPLLMEVFRPQLVIGKGKVCVDGVTVHMTDAQQRAILDDFKAGAT 475
Query: 486 NLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD 545
LLVAT + EEGLD+ C VIR+D T+ SFIQSRGRAR + Y +V QR +
Sbjct: 476 KLLVATSLLEEGLDVGRCNFVIRYDSCLTLRSFIQSRGRARKRNAVY--IVCESAQRSIK 533
Query: 546 L----IKNFSKEEDRMNR 559
+K +ED +NR
Sbjct: 534 TSQVALKALKLQEDLVNR 551
>gi|395855810|ref|XP_003800342.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2
[Otolemur garnettii]
Length = 931
Score = 110 bits (276), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 240/550 (43%), Gaps = 67/550 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL A + +N I+ TGCGKT +++L+ + + Q+ +F A + +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEDHLKKFSQGQRRKVVFFANQIPVY 304
Query: 119 QQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E +G+KV G + + E+ ++ +++ + PQIL+ L + I
Sbjct: 305 EQQKSVFSKYFERLGYKVAGISGAT---AENAPVEQIVENNDIIFLTPQILVNNLKNGTI 361
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ HPY IM ++ + +P++ GMTAS VG
Sbjct: 362 PSLSVFTLMIFDECHNTS--KQHPYNMIMFNYLDQKLGGSSDPLPQVIGMTASVGVGDAK 419
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ + +L +++ +V+D E+LE V P +Y + ++ C
Sbjct: 420 NTDEAMDYICRLCASLDVSEIVTVKDNLEELEQIVYKP----QKYFRKVESRTTDPFKCI 475
Query: 290 EQLAEIKREQYISALSRKL---HDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
++E+ RE +L++ + +L N + NR + K+ C
Sbjct: 476 --ISELMRE--TESLAKSICGELGETNLGNLSPIQNREFGTQKYEQWISTVQKACTVFRL 531
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA----- 383
E +C AL ++ S + LI E + D+L S V AA
Sbjct: 532 PDRDEESRICKAL---FLYTSHLRKYNDALIINEHARMKDALDYLKDFFSNVRAAGFDET 588
Query: 384 ---ICRR-DGIASDLSCIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
+ RR + +L I V +P KL L IL + L + I+FV
Sbjct: 589 EQDLTRRFEEKLQELETISV--DPNNENPKLEDLCFILQEEYHLNPETRTILFVKTRALV 646
Query: 438 RALSYILQNLKFLASWRCHFLVG---VNAGLKSMSRNAMKSILEKF-RSGELNLLVATKV 493
AL ++ L + L G N + M+ A K +L F +G N+L+AT V
Sbjct: 647 DALKKWIEGNSRLNFLKPDILTGRCKTNQNI-GMTLPAQKCVLNTFGTNGANNILIATSV 705
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE 553
+EG+DI C LVI ++ V IQ+RGR R S+ L + + E + I N KE
Sbjct: 706 ADEGIDIVQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNADVIEKEKI-NLYKE 764
Query: 554 EDRMNREIMD 563
+ MN I++
Sbjct: 765 K-MMNDSILN 773
>gi|161579129|gb|ABX72052.1| Dicer-1 protein [Tribolium castaneum]
Length = 157
Score = 110 bits (276), Expect = 5e-21, Method: Composition-based stats.
Identities = 69/158 (43%), Positives = 88/158 (55%), Gaps = 19/158 (12%)
Query: 1161 ALVGAFIDDSGFKAATAFLKWIGIQV--EFEASQVTNICISSKSFLPLS-------ASLD 1211
AL+GA++ + G + A F+ W+GI+V + E I + PLS LD
Sbjct: 1 ALIGAYLIECGPRGALLFMAWLGIRVLPQLEDGTYGEIELPKS---PLSNHLTYPREELD 57
Query: 1212 MA-----TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYL 1264
M E +G++F R LLQA H SF N L CYQRLEFLGDAVLDYLIT +L
Sbjct: 58 MLLDGYDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHL 117
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
Y PG LTDLRS LVNN FA++AV F+++
Sbjct: 118 YEDTRMHSPGALTDLRSALVNNTIFASLAVRNGFHRYF 155
Score = 48.5 bits (114), Expect = 0.030, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 31/59 (52%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
+RLE LGDA L Y + RHL+ G LT RS VNN+ LA RN Y R+
Sbjct: 99 QRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVNNTIFASLAVRNGFHRYFRN 157
>gi|50897085|dbj|BAD34723.1| Dicer-related RNase III protein Dcr2p [Tetrahymena thermophila]
Length = 1838
Score = 110 bits (276), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 17/252 (6%)
Query: 451 ASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
++ RC LV ++ + S N +E FR EL ++++T V EEG DI +C LVI F+
Sbjct: 543 SAQRC-VLVNLDFEVSKQSEN-----IEAFRKKELQIILSTSVTEEGFDIPSCNLVISFN 596
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN--REIMDRTSSD 568
+ SF+Q +GRAR S++ + Q++ D + +D + +EI +
Sbjct: 597 KISNLKSFVQIKGRARKENSKFIIMAKDKYQKQ-DYETDIESYKDLIQQIKEIAPKVEKQ 655
Query: 569 AFTCSEERIYK-VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG--GTI 625
YK V +GA ++ + V+L H Y ++L + N K FYY+ ++ G I
Sbjct: 656 EIEIRPNYKYKIVKETGAILNTNWSVNLFHTYANQLLYSYDSNIKGPFYYYIEITNVGFI 715
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ-----EDNAT 680
C II+P+ + + PQ+ E AKKDAC +A+ L++ + D L +++ +
Sbjct: 716 CQIIVPSQSGLKTFCSNPQAQKEDAKKDACFQAVIILYRQYKIFDQYLRNISQKIQNSQS 775
Query: 681 EDEPMLFSSDSD 692
E LF + D
Sbjct: 776 EKSESLFEDEKD 787
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 134/277 (48%), Gaps = 57/277 (20%)
Query: 82 GCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALVQQQAKVI--------------- 125
G GKT IA +LI Y + PQK IFLA TV LV+QQ I
Sbjct: 1 GAGKTMIATMLINYFFQKQKKAPQKKKIIFLANTVQLVKQQYAEIKNNLQRISEMMENDK 60
Query: 126 --------EESIGFKVRTF--------CGGSKRLKSHCD--------WEKEIDQYEVLVM 161
+E I ++ R F C GS + K + W+ ++ YE+ VM
Sbjct: 61 EISQILKFQEGINYR-RIFEKENHIVKCHGSYKQKDNLQIETFTKQKWDYLLENYEIFVM 119
Query: 162 IPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKVPR 216
I Q+LL L +I++E I ++I+DECHH + +HPY I +FY + + +++P+
Sbjct: 120 IGQVLLNGLRRGYIRIEDIEVIIYDECHHT--RQDHPYCLIQYEFYHFHKRRNEQVQLPK 177
Query: 217 IFGMTASPVVGKGASAQAN-LPKSINSLENLLDAKV--YSVEDAEDLESFVSSPVVRVYQ 273
I+G+TASPV+ + +N + K I+ L LDA Y++E++ + ++ + V +
Sbjct: 178 IYGLTASPVLDIEVKSDSNIMKKKISELCTNLDANFVKYNIEES---KKYIKEATICVEE 234
Query: 274 YGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHD 310
YG N + EQ+ E++IS + K ++
Sbjct: 235 YGEEKNIQERANQFLQEQII---GEKWISDIEDKQNE 268
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 1244 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
C QRLEFLGDAVLD +I YL++ +P PG+LT +++ LV N+ + + + FYKF+I
Sbjct: 1621 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1680
Query: 1304 ----FDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLN 1359
+ + +NN +M S + K LGD++ES +GAI +D+ +
Sbjct: 1681 GSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQSLIKTLGDVIESLVGAIFIDNNLDYE 1740
Query: 1360 TVWKIMLSFL 1369
KI++ L
Sbjct: 1741 ITKKIVMETL 1750
Score = 41.2 bits (95), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 1246 QRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+R EFLGD VL L ++ +Y +PK L R++++ N+ A +AV + +K+++
Sbjct: 1328 ERYEFLGDTVLKCLSSTQIYFEHPKSMEDHLHVHRTIIIQNRNLAQIAVKKKIFKYIL 1385
>gi|251765118|sp|Q6ATG6.2|RTL2_ORYSJ RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2
Length = 317
Score = 110 bits (276), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 13/214 (6%)
Query: 1213 ATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLK 1272
A +E LL +QF LL +A H SF YQRLEF+GD+ L +++LY P L
Sbjct: 38 ARVERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLG 97
Query: 1273 PGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV---------DYMITP 1323
PG L+ LR+ ++ + A VAV Y L + L + ++ D P
Sbjct: 98 PGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVP 157
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
VK PKVL D+VE+ A+ +D F+L +WK+ +PI+ + P+
Sbjct: 158 YGGSVVK----APKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPV 213
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGK 1417
L ELC + QF + +KGG + V G+
Sbjct: 214 TMLHELCQKHGKMAQFKTWQKGGMTVVNVFVAGE 247
Score = 45.4 bits (106), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 1002 AIELKHLLSASFPEGAEVSAEMLLKALTTEK-CQERFSLERLEILGDAFLKYAVGRHLFL 1060
A ++ LL F +G +L +ALT + + S +RLE +GD+ L A L+L
Sbjct: 37 AARVERLLRYQFRDG-----RLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYL 91
Query: 1061 LHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR--ICS 1118
+ T+ G L+ R+ ++ L ++A R++L +R R CPR +
Sbjct: 92 TNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLR-------------RNCPRLDLLV 138
Query: 1119 KETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
+ T+ + + DDL+ G K +AD+VEA+ A D F
Sbjct: 139 GQFIETVKQEPE----DDLS--TVPYGGSVVKAPKVLADIVEAIAAAVYVDCKF 186
>gi|298711900|emb|CBJ48587.1| dicer-like 3 [Ectocarpus siliculosus]
Length = 1557
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 33/289 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI----YELAHLIRKPQKSICIFLAPTV 115
R YQ E A + N+++ TG GKT ++++LI +E A CIFL PT
Sbjct: 4 RPYQAEAFDAARKANVVMVGATGVGKTLVSLMLIRDFYFEDARRRESKNHKWCIFLCPTQ 63
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY--HR 173
LV QQAK + G + + G W++E+D EVLVM P LL L+ +
Sbjct: 64 ELVFQQAKSAQIFTGVRCGPYVGKDLDYWGVKKWKEEMDNKEVLVMTPNALLNLLHRGNE 123
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGA 230
++ ++ + +L+FDECH A+ K HPYA++M FY + + +P++FGMTASP
Sbjct: 124 YLSLKDVGVLVFDECHKARKK--HPYARVMA-FYLELRKNRGPLPKVFGMTASP------ 174
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+I +E +L K Y ED + +E F ++ + Y V+ SY +
Sbjct: 175 --------TIECVE-VLQCKAYVCED-DLIEEFQANADWELLSYEAVVGPVLFSY----Q 220
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG 339
L ++I ++ L D + T K + +L + L VCG
Sbjct: 221 HLGLWCAMRHIR-VAENLPDRSRITRTKKVVLQLTQHLTESPLGLAVCG 268
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 60/344 (17%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDT-VDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGDA+L Y G +F ++EG +T R N V+N+ LLK A L+ ++
Sbjct: 1165 ERLETLGDAWLNYYAGFVVFQDKPVLMEEGMMTLLRKNVVSNARLLKCADGRGLREFM-- 1222
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ P GR D + + KKTIADV
Sbjct: 1223 --YPPRSIL-----------------------GRPFDMWSPSLLPLPPPVKASKKTIADV 1257
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQ------------VTNICISSKSFLPL 1206
VEAL+GA + G ++A ++W+G+ A+ + + +++K L
Sbjct: 1258 VEALLGAALVAGGNRSAAYIMEWLGLAAASAAATAAAAGEDPAAPPLPEVYVATKPSARL 1317
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRL------GGCYQRLEFLGDAVLDY 1258
++ + LE LG+ F + L +QA HPS+ N + YQRLEFLGDAVL +
Sbjct: 1318 MGNIRL--LEKRLGYTFRYPWLCMQAITHPSWTINDIPPGTVPAQDYQRLEFLGDAVLGW 1375
Query: 1259 LITSYLYSVYPKLKPGQLTDLR--SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
++T++LY P +LT ++ S V N + +A+ + L +L +
Sbjct: 1376 MVTAHLYFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVHHVLRASPKIL-----GH 1430
Query: 1317 VDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNT 1360
+ I + P+ P D++E+ +GA+ +DS +N
Sbjct: 1431 IHAFIENNGVSGTGTAPKHP---ADVLEALIGAVFIDSSCCMNA 1471
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
Query: 423 QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG-VNAGLKSMSRNAMKSILEKFR 481
++ +C+VFV R TAR LS L + + C F+VG NA R+ M + FR
Sbjct: 388 KNFRCMVFVERRATARVLSAFLSH-SLSGRFCCGFVVGRANARGDDFGRSRMAQTINMFR 446
Query: 482 SGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ 541
+GE+ +LV T EG+D+ C LV+ D +T S I +RGRAR ++ +V+ G+
Sbjct: 447 AGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRGRARSKGGKFVIMVEDGDD 506
Query: 542 RELDLIKNFSKEEDRMNREIMDRTSSDAFT----CSEERIYKVDSSGACISAGYGVSLLH 597
E D + E + + R + + ++ ++SSGA + L++
Sbjct: 507 MERDRVSLMLMESEDIKRFQLGHEKASVRVPLRHSHPNMVHHIESSGAVVDMDMATPLMN 566
Query: 598 RYCSKLPHDEFFNP 611
+ S + D F+P
Sbjct: 567 QALSAVGCD--FHP 578
>gi|389848441|ref|YP_006350680.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
gi|448616895|ref|ZP_21665605.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
gi|388245747|gb|AFK20693.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
gi|445751550|gb|EMA02987.1| Hef nuclease [Haloferax mediterranei ATCC 33500]
Length = 870
Score = 110 bits (274), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 214/504 (42%), Gaps = 86/504 (17%)
Query: 55 PKQIARK-YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
P I R+ YQ+ L A +++ +V L TG GKT +++L+ E H I +FLAP
Sbjct: 17 PSFIERRLYQIRLAGAARDDHTLVCLPTGLGKTTVSLLVTAERLHEI----GGKSLFLAP 72
Query: 114 TVALVQQQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
T LVQQ A E++ ++ F G + W D ++++ PQ++ L
Sbjct: 73 TKPLVQQHADFYREALNIPDDEIVVFTGDVRPDDRAALW----DDAQIIIATPQVIENDL 128
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA 230
I + + L FDECH A ++ Y I + ++ P + GM+ASP G
Sbjct: 129 IGNRISLRDVTHLTFDECHRA--SGDYAYVYIAERYHAD--AADPLVTGMSASP----GG 180
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY--VTC 288
+A L N + D +V + EDA+ V +Y +DT + +
Sbjct: 181 DEEAILEVCENL--GIADVEVMTEEDAD------------VAEY---THDTDVEWNRIQL 223
Query: 289 SEQLAEIKREQYISALSRKLHD------HQSLRNTT------KQLNRLHDSMKFCL---E 333
+++ EI+ AL+ + D H + ++T K LNR+ ++ + +
Sbjct: 224 PDEILEIR-----DALNEVIKDRLEKLKHLGVASSTKPDVSQKDLNRMRAELQRLMNADK 278
Query: 334 NLGVCG-ALHASYILLSGDETMRNELIEAEGNTIDDSLCRF------------ASQASEV 380
+ G G + HA + L EL+E + +S+ R+ AS+AS+
Sbjct: 279 SEGYKGMSTHAEVMKLR----RAVELVETQSV---ESVRRYFERQRNAARSSGASKASQR 331
Query: 381 FAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
A + + L F ++L + T + + IVF TA AL
Sbjct: 332 LVAEPKVREAMRKAESFDGLHPKFRKTRIL----LAETLGIHDGERVIVFTESRDTAEAL 387
Query: 441 SYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ L F S R G G MS+ + L+KFR GE +LV+T V EEGLD+
Sbjct: 388 TEFLSE-SF--SVRRFVGQGDREGSDGMSQKEQQETLDKFRGGEFEVLVSTSVAEEGLDV 444
Query: 501 QTCCLVIRFDLPETVASFIQSRGR 524
LV+ F+ T IQ +GR
Sbjct: 445 PEVDLVLFFEPVPTAIRSIQRKGR 468
>gi|301612421|ref|XP_002935717.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Xenopus
(Silurana) tropicalis]
Length = 1032
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 243/535 (45%), Gaps = 56/535 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
RKYQ EL K A +N ++ TG GKT +++++ + +K +F+A V +
Sbjct: 263 RKYQEELAKPAFTGKNTMICAPTGSGKTLVSLVICKHHLECMPNGKKGKVLFMATKVPVY 322
Query: 119 QQQAKVI---EESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E +KV G S + I+ +++++ PQIL+ CL +
Sbjct: 323 EQQKDVFCKYFEGSRYKVE---GVSGETAENFPVGLVIENSDIIILTPQILVNCLQSGTV 379
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKGA 230
+ + +++IFDECH+ NHPY +M + + + +P+I G+TAS GK
Sbjct: 380 PSISVFSMMIFDECHNTI--GNHPYNVLMFSYLDLKLNMPGVALPQIIGLTASVGTGKAK 437
Query: 231 SAQANLPKSINSLENL---LDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
S LP++I+ + L L+ +V S E E+L V P + ND+ ++
Sbjct: 438 S----LPEAIHYITRLCASLNIEVISTVKEHKEELAETVFKPTKSISIAPQRENDSFTAI 493
Query: 286 VTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL--------E 333
+ SE ++E E+ +L+ +++N T K + D+ K C +
Sbjct: 494 M--SEIMSET--EKMAKDFYPELYSMSNIQNRSYGTQKYEQWIVDTQKKCCVLQMDDKNK 549
Query: 334 NLGVCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR--DG 389
+ +C +L + ++ D M N+ + + +D F + + F I ++ +
Sbjct: 550 EMRICSSLFTYTEHLRKYNDSIMINDDARTK-DALDFLENFFNNMKNGSFNEIEQKLYNM 608
Query: 390 IASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
L + + + + KL L IL ++ + ++FV AL ++
Sbjct: 609 FQDKLPQLLDISKNNINPKLEELQFILDESYHENPETRSLLFVKTRSLVSALKTWIEENP 668
Query: 449 FLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDIQTCCL 505
L + L+G + +S M+ ++ K LE F+ S E LL+AT V +EG+DIQ C L
Sbjct: 669 LLQFLKPEILIGRSKRNESLGMTLSSQKGALEAFKNSAESKLLIATSVADEGIDIQACNL 728
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE 560
V+ ++ V IQ RGR R S+ FL+ S + + KEE+ + RE
Sbjct: 729 VLLYEYVGNVTKMIQVRGRGRAKDSK-CFLITSKGEEAI-------KEENNLLRE 775
>gi|149408137|ref|NP_001092258.1| probable ATP-dependent RNA helicase DHX58 [Rattus norvegicus]
Length = 678
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 220/529 (41%), Gaps = 82/529 (15%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A + HL + + L V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKR--HL-ETVDRGKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q A+ + + V T G + S + +++L+ ++L L
Sbjct: 61 NQHAEEFRRMLDKQWTVTTLSGD---MGSRAGFGLLARSHDLLICTAELLHLALKSSEED 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y I+ + + + K +P++ G+TASP G
Sbjct: 118 EHVELTEFSLIVVDECHHTH--KDTIYNTILSRYLEHKLKKAKPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSY--- 285
Q + + NL ++ S ++ L P QY T +
Sbjct: 176 TKLQGAIDHILQLCANLDTWRIMSPKNCYSQLLEHNPKPC---KQYDLCQRRTQDPFGDL 232
Query: 286 --------------VTCSEQLAEIKREQYISALSRKLHDH--QSLRNTTKQLNRLHDSMK 329
+Q EQ + LS+ + Q R L R +D++
Sbjct: 233 LKKLMKQIHQQLEMPDLKQQFGTQMYEQQVVQLSKDAAEAGLQEQRVYALHLRRYNDAL- 291
Query: 330 FCLENLGVCGALHASYILLSGDETMRNELIEAEG---NTIDD---SLCRFASQASEVFAA 383
+ + + AL+ + ++ +++ AE DD +L +FA+Q E
Sbjct: 292 YIHDTVRAWDALNMLQDFYDTERALKTQMVHAERWLLELFDDHRKALAQFAAQGPE---- 347
Query: 384 ICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSY 442
+ KL L GIL F H + I+F TA +L
Sbjct: 348 ----------------------NPKLEMLEGILLKQFGSPDHTRGIIFTRTRQTASSLLL 385
Query: 443 ILQNLKFLAS--WRCHFLVGV-NAGLKS-MSRNAMKSILEKFRSGELNLLVATKVGEEGL 498
L+ L + + L+G N G + M++ + ++++FR G+LNLLVAT V EEGL
Sbjct: 386 WLRQQPCLQTVNIKPQMLIGAGNTGQSTHMTQKDQQEVIQEFRDGKLNLLVATSVAEEGL 445
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
DI C +V+R+ L S +Q+RGRAR QS Y+F+ G+ +REL
Sbjct: 446 DIAQCNVVVRYGLLTNEISMVQARGRARAGQSVYSFVATEGSREIKREL 494
>gi|344271077|ref|XP_003407368.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Loxodonta
africana]
Length = 926
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 228/521 (43%), Gaps = 63/521 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVA 116
R YQLEL A +N I+ TGCGKT +++L+ HL + PQ K +F A +
Sbjct: 245 RNYQLELALPAQNGKNTIICAPTGCGKTFVSILICEH--HLKKFPQGQKGKIVFFAVQIP 302
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E +G+ V G + + ++ +++V+ PQIL+ L
Sbjct: 303 VYEQQKSVFSKYFERLGYTVAGISGATS---EEVPVRQIVENNDIIVLTPQILVNNLKDG 359
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGK 228
I + + L+IFDECH+ +HPY IM ++ + +P++ G+TAS VG
Sbjct: 360 IIPSLSVFTLMIFDECHNTS--KHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTASVGVG- 416
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
A + I L LD V + ++ ++LE V+ P ++ + +++
Sbjct: 417 DAKDITDAKMYICKLCAALDTSVIATVKDNLKELEEIVNKP----QKFFRKVETRTTNKF 472
Query: 287 TC--SEQLAEIKR--EQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL--------EN 334
C S+ + EI++ E L H T K + K C+ E
Sbjct: 473 KCIISQLMVEIEKMAESVFEELESLSHIQNREYGTQKYEQWIIAVQKACMVFQMPDKNEE 532
Query: 335 LGVCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+C AL + S++ D M NE I D+L + V AA D I
Sbjct: 533 SRICKALFLYTSHLRKYNDALMINE-----DARIKDALDFLKDFFTNVRAA--GFDEIEQ 585
Query: 393 DLS--CIEVLKEPFF--------SKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALS 441
DL+ E L+E + + KL L IL + + + I+FV AL
Sbjct: 586 DLTQRFEEKLQELEYVSMDPNNENPKLQDLSFILQEEYHVNPDSRTILFVKTRALVDALK 645
Query: 442 YILQNLKFLASWRCHFLVG---VNAGLKSMSRNAMKSILEKFRSG-ELNLLVATKVGEEG 497
++ L+ + L G N + M+ A K +L+ FRS + +L+AT V +EG
Sbjct: 646 KWIEENPKLSFLKPGILTGRGRTNQKI-GMTLPAQKCVLDTFRSNSDSKILIATSVADEG 704
Query: 498 LDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
+DI C LVI ++ V IQ+RGR R S+ FLV S
Sbjct: 705 IDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSK-CFLVTS 744
>gi|448462984|ref|ZP_21597905.1| Hef nuclease [Halorubrum kocurii JCM 14978]
gi|445817487|gb|EMA67359.1| Hef nuclease [Halorubrum kocurii JCM 14978]
Length = 821
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 218/500 (43%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSIPDDEIVVFTGEVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHCTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL ++ +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVL 226
Query: 294 EIKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----AL 341
I R+ ++ +L + L NTT K LN++ +K ++N G +
Sbjct: 227 AI-RDALNEVITDRLEKLKQLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSEGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINGGERAILFTESRDTAEAL------V 386
Query: 448 KFL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+
Sbjct: 387 EFLSASFDVRKFVGQGDKEGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|194377180|dbj|BAG63151.1| unnamed protein product [Homo sapiens]
Length = 536
Score = 109 bits (272), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 228/508 (44%), Gaps = 68/508 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL AM+ +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 41 RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPQGQKGKVVFFANQIP 98
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQ V E G++V G + + E+ ++ +++++ PQIL+ L
Sbjct: 99 VYEQQKSVFSKYFERHGYRVTGISGATAE---NVPVEQIVENNDIIILTPQILVNNLKKG 155
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
I + + L+IFDECH+ HPY IM ++ + +P++ G+TAS VG
Sbjct: 156 TIPSLSIFTLMIFDECHNT--SKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGD 213
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYV 286
+ L I L LDA V + + E+LE V P + I+D Y+
Sbjct: 214 AKNTDEAL-DYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISD-KFKYI 271
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKF----------CL---- 332
+A++ R+ +L++++ + L N ++ NR + K+ C+
Sbjct: 272 -----IAQLMRD--TESLAKRI--CKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQM 322
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
E +C AL ++ S + LI +E + D+L S V AA D
Sbjct: 323 PDKDEESRICKAL---FLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAA--GFD 377
Query: 389 GIASDLS---------CIEVLKEPFF-SKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTA 437
I DL+ V ++P + KL L IL + L I+FV
Sbjct: 378 EIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV 437
Query: 438 RALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVG 494
AL ++ L+ + L G ++ M+ A K IL+ F+ SG+ N+L+AT V
Sbjct: 438 GALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVA 497
Query: 495 EEGLDIQTCCLVIRFDLPETVASFIQSR 522
+EG+DI C LVI ++ V IQ+R
Sbjct: 498 DEGIDIAQCNLVILYEYVGNVIKMIQTR 525
>gi|343428057|emb|CBQ71581.1| related to cell cycle control protein dicer [Sporisorium reilianum
SRZ2]
Length = 1683
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 138/302 (45%), Gaps = 33/302 (10%)
Query: 406 SKKLLRLIGILSTFRLQQHMKC-IVFVNRIVTARALSYILQNLKFLASWRCHFLVG---- 460
S K+LRLI L F C I+FV R TA L +++ + L FL+G
Sbjct: 495 SHKVLRLIETLKCFEPSAADFCAIIFVERRQTATLLVELIKRVAGLEFIHPEFLLGHENG 554
Query: 461 -VNAGLKSMSRNAMKSILEKFRSGE-LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
N G M + +L +FR + NLLVAT + EEGLDIQ LV+RFDL SF
Sbjct: 555 SANGGAPGMDWHDQVQVLNRFRRRKPTNLLVATSIAEEGLDIQAANLVVRFDLFNRHISF 614
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKN-FSKEEDRMNR-EIMDRTSSDAFTCSEER 576
+QSRGRAR QS + + + N I N F+ E R E + DA ++E
Sbjct: 615 LQSRGRARAKQSRFILMAERDNASHAQAILNAFNTEASRAKWLEGIAEAEHDAGFYAQEW 674
Query: 577 IYKV----DSSGA---CI---SAGYGV------SLLHRYCSKLPHDEFFNPKPKFYYFDD 620
+++ D +GA CI S G + SL+ Y + L H E+ Y D
Sbjct: 675 QHQLRVERDEAGAGEECIFEPSTGARLFPEDAPSLVSHYAATL-HSEYLKDAVLAYKLDS 733
Query: 621 LGGTI-------CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLL 673
+ C + LP+ + + + S + AK+ KA + L +G L+DYL+
Sbjct: 734 IPHGFGVPSTFSCTLELPSTSAVRSVESGEYRSKKQAKRMVAFKACQQLRDMGELDDYLM 793
Query: 674 PQ 675
P+
Sbjct: 794 PK 795
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 120/252 (47%), Gaps = 37/252 (14%)
Query: 58 IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK------------ 105
+ R YQLEL + A N++V L TG GKT I+VLL+ + H ++ Q+
Sbjct: 69 VPRSYQLELAELAKAGNVLVCLDTGSGKTLISVLLLQHV-HEVQNAQRPPSPPQSPAPPA 127
Query: 106 ----SICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSK---RLKSH---------CDW 149
+ FL V LV QQ+ VI V G K R K + W
Sbjct: 128 PQRPKVSFFLVNLVPLVHQQSSVIAGHSNLSVGKLYGELKDTVRGKGNKLTVDGWREPQW 187
Query: 150 EKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKP 209
++ ++V+V Q L L H FIKM+ + LLIFDE HHA NHP+ +IMK +
Sbjct: 188 SALLESHQVIVSTAQCFLDALIHGFIKMDDLNLLIFDEVHHAL--KNHPFFRIMKYYRLA 245
Query: 210 DIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP 267
+ P+IFGMTASP+ ++ + L+ +++A++++V + +DL P
Sbjct: 246 PEKERPKIFGMTASPIF----TSTGQFDDASRYLQKVMNARIHTVSKDTLQDLREVKQKP 301
Query: 268 VVRVYQYGPVIN 279
V ++ P +
Sbjct: 302 EELVIEFDPFLT 313
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP 1273
L+ L H + + L L+AF HPS + YQRLEFLGDA LD+ I +++ + P
Sbjct: 1334 LQSLFDHTYRYPHLGLEAFTHPSLLASVLPSYQRLEFLGDAWLDFCIVRMIFAEGEERSP 1393
Query: 1274 GQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE----V 1329
G++T + +L +N A + V + F+ DS VL ++I Y + + + +
Sbjct: 1394 GEMTAHKGVLASNGALGALGVRLGLHAFVASDSAVLGDSIARYAAALGSVDEKGQYWTRL 1453
Query: 1330 KEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM----LSFLDPILKFSNLQLNPIRE 1385
G PK + D+VE+S +I++DSGF+ V ++ + F + ++ LQ++ +R
Sbjct: 1454 ARGVVVPKAVADVVEASFASIVVDSGFDARVVQRVFELMCVPFYERFCRYDALQVSEVRR 1513
Query: 1386 LLELC 1390
+LE
Sbjct: 1514 VLEFA 1518
Score = 47.0 bits (110), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 995 RLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAV 1054
R + LL+A L AS + +++L+ALT+ F ERLE LGD FLK
Sbjct: 1123 RYDQLLLAHACNATLFAS-----RLDTDLVLEALTSPAAGSSFDYERLEFLGDTFLKLVA 1177
Query: 1055 GRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVY 1095
H F H E EL + N LLK A R L+ +
Sbjct: 1178 TCHTFTTHLGRTEAELHLANKAILTNVRLLKEARRVRLERW 1218
>gi|410978420|ref|XP_003995589.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Felis catus]
Length = 924
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 230/521 (44%), Gaps = 61/521 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL A E +N I+ TGCGKT +++L+ + QK +F A + +
Sbjct: 243 RNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHLKNFPQGQKGKVVFFAVQLPVY 302
Query: 119 QQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E +G+KV G + + ++ ++ +++++ PQIL+ L + I
Sbjct: 303 EQQKSVFSNYFERLGYKVAGVSGAT---SENVSVKQIVENNDIIILTPQILVNSLKNGTI 359
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ +HPY IM ++ + +P++ G+TAS +G A
Sbjct: 360 PSLSVFTLMIFDECHNT--GKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTASVGIG-DA 416
Query: 231 SAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
+ A + I L LD V + ++ E+LE V P ++ + ++ C
Sbjct: 417 KSTAEAVEYICRLCASLDTSVIATVKDNLEELEEIVYKP----QKFFRKVESRTTDRFKC 472
Query: 289 SEQLAEIKREQYISALSRKLHDH----QSLRN----TTKQLNRLHDSMKFCL-------- 332
++++ RE +L++ + D +RN T K + K C
Sbjct: 473 I--ISQLMRE--TESLAKSIFDEIEGISQIRNREFGTQKYEQWIVTVQKACTVFQLPDKD 528
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
E +C AL ++ S + LI E + D+L + V AA D I
Sbjct: 529 EESRICKAL---FLYTSHLRKYNDALIINEHARMKDALDYLKDFFTNVRAA--GFDEIEQ 583
Query: 393 DLS---------CIEVLKEPFFSK-KLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALS 441
DL+ V +P KL L IL + L + I+FV AL
Sbjct: 584 DLTRRFEEKLQKLESVSMDPSNENPKLKDLCFILQEEYHLNPESRTILFVKTRALVDALK 643
Query: 442 YILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFRS-GELNLLVATKVGEEGL 498
++ L+ + L G ++ M+ A K L+ FR+ G+ +L+AT V +EG+
Sbjct: 644 KWIEENSELSFLKPGILTGRGKTNQNTGMTLPAQKCALDAFRTNGDKKILIATSVADEGI 703
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSG 539
DI C LVI ++ V IQ+RGR R S+ FL+ S
Sbjct: 704 DIAECNLVILYEYVGNVIKMIQTRGRGRARGSK-CFLLTSN 743
>gi|402588900|gb|EJW82833.1| hypothetical protein WUBG_06256 [Wuchereria bancrofti]
Length = 304
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA + NIIV LGTG GKT IAVLLI E + P K+ FL V+
Sbjct: 16 RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTTKLVTPWKNGGKRAFFLVDKVS 75
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
LV+QQA IE V G + ++ I +EV V+ QI L L H F
Sbjct: 76 LVEQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDTFIALHEVTVLTAQIFLDLLDHGF 135
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQA 234
M A++IFDECHH + S HPY IM + + + PRI G+TAS + K +
Sbjct: 136 FNMSNAAVIIFDECHHV-LGSKHPYRLIMHRYGQLTEVDRPRILGLTASLISSK--IPPS 192
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDL 260
NL + LE ++ + S+E A DL
Sbjct: 193 NLEHLLEKLERIMHS---SIETASDL 215
>gi|301106827|ref|XP_002902496.1| dicer-like, putative [Phytophthora infestans T30-4]
gi|262098370|gb|EEY56422.1| dicer-like, putative [Phytophthora infestans T30-4]
Length = 717
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q E+ + A E+N+++ TG GKT +A+ L+ E + K F+APT LV
Sbjct: 7 RAFQREVLELAREKNVVMVGDTGIGKTFLAIALLSEQDYSGDKR----AFFMAPTRQLVV 62
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
Q I ++ +V ++CG + L WE+E+ V V P+I+ L ++ +
Sbjct: 63 QITAKIRQTSTLRVNSYCGRTADLWDATQWERELQLTRVFVCTPEIVRNVLLKGYVSLSR 122
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPV 225
+ LL+FDECHH V HPYA+++K F + + +PRIFG TA P
Sbjct: 123 MNLLVFDECHH--VTKRHPYAQVIKMFNQENSACMPRIFGTTACPT 166
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ M++ L+KF SG + +LV+T V EG+D C L+I D T +Q +GRAR
Sbjct: 473 DKMETTLKKFESGSIRVLVSTAVSVEGVDFPQCGLIIVMDRVGTARKLMQLKGRARHEDG 532
Query: 531 EYAFLVDSGN----------QRELDLIKN--FSKEEDRMNREIMDRTSSDAFTCSEERIY 578
+L + G+ RE+++I FS+E+ ++ +++ +I
Sbjct: 533 VVYYLAEEGDLGHEVYYKQLTREVEVIDQLEFSREKVETIQQQPRSIAAEMMGAGVHKI- 591
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFY 616
+++S+GA + ++ ++++C LP F + Y
Sbjct: 592 EIESTGAVLDLDSSITCINQFCQSLPTRLFTVDAKRLY 629
>gi|348681952|gb|EGZ21768.1| hypothetical protein PHYSODRAFT_489360 [Phytophthora sojae]
Length = 715
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q E+ + A E+N+++ TG GKT +A+ L+ E K F+APT LV
Sbjct: 7 RAFQREILELAREKNVVMVGDTGIGKTFLAIALLSEQDFSGDKR----AFFMAPTRQLVV 62
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
Q I ++ V +CG + L WE+E+ VLV P+I+ L ++ +
Sbjct: 63 QITAKIRQTSTLSVNAYCGSTADLWDAAQWERELQLTRVLVCTPEIVRNVLLKGYVTLSR 122
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDF-YKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
+ LL+FDECHH V HPYA+++K F ++ D +PRIFG TA P A L K
Sbjct: 123 MNLLVFDECHH--VTKRHPYAQVVKIFNHEDDAAALPRIFGTTACPTRHCAEKLHAELKK 180
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 473 MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
M++ L KF SG + +L++T V EG+D C L++ D T +Q +GRAR
Sbjct: 473 METTLRKFESGSIRVLISTAVSVEGVDFPQCGLIVVMDRVGTSRMLMQLKGRARHEDGIV 532
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNR-----------EIMDRTSSDAFTCSEERIYKVD 581
+L + G+ K +E + +N+ + R+ + + E+ +++
Sbjct: 533 YYLAEEGDLAHEVYYKQLVREAETINQLEFSHERVETIQQQPRSIAAQMMGNGEQKIEIE 592
Query: 582 SSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
S+GA + + ++++C LP + + Y F +
Sbjct: 593 STGAVLDLDSSIVCINQFCQSLPSRLYTVDVKRLYSFSE 631
>gi|238578670|ref|XP_002388796.1| hypothetical protein MPER_12144 [Moniliophthora perniciosa FA553]
gi|215450407|gb|EEB89726.1| hypothetical protein MPER_12144 [Moniliophthora perniciosa FA553]
Length = 463
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 203/465 (43%), Gaps = 37/465 (7%)
Query: 164 QILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTAS 223
QI L L H + ++LL+FDECHH + NHPY IM+++ P++FG+TAS
Sbjct: 8 QIFLNLLTHSLWGLNKVSLLVFDECHHT--RKNHPYNGIMREYMLLSPEDRPKVFGLTAS 65
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVVRVYQYGPVINDTS 282
P+ N S+N L+ +DA+V V D ++L PV + +Y I+
Sbjct: 66 PI-----QNAKNPLVSLNELQTNMDARVIGVLDHVDELAQHTPKPVEVIQEYS--ISLEQ 118
Query: 283 SSYVTCS-EQLAEIKREQYISALSRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGA 340
SSY S + ++A++ D + + T L S+ +E + A
Sbjct: 119 SSYPEPSLWSCINVFDRATLTAIAECWPDIERRYHVTLGNLGPYCASLYLFMEMKNIISA 178
Query: 341 LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI-EV 399
+ + + + ++L+ +T + L ++ + + SD +
Sbjct: 179 FYQPDL----NPSFSDDLVVHVPHTTLEDLPEHFDDIVDILVDYEQFYSVRSDYFLLPST 234
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW-RC-HF 457
+ + + K+ L+ IL + I+FV + A L+ +L ++ L +C F
Sbjct: 235 VPLEWCTPKIKTLVDILVA-HYTPTFQGIIFVEQRQVATCLAGVLPYIEELKGLVKCGDF 293
Query: 458 LVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
VN +S+ S S + ++AT V EEGLD C +VIRFD + + +
Sbjct: 294 FGNVNDVEESLRGTLKCSRGPDVSSPNITAVIATSVAEEGLDFPACDIVIRFDPLQHMVA 353
Query: 518 FIQSRGRARMPQSEYAFLVDSGN-----------QRELDL--IKNFSKEEDRMNREIMDR 564
++QSRGRAR S++ ++ G+ Q E+ L I N S+ D E D
Sbjct: 354 YVQSRGRARNKISKFIIMLPEGDVISRAKYEAFLQAEVHLKDIYNVSRPPDDAMDEDSDS 413
Query: 565 TSSDAF---TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHD 606
+ + T ER Y V + A I+ ++LL+ C+ +P D
Sbjct: 414 EADEEVELDTQDRER-YVVPHTSAFINYDNSIALLNHLCALIPRD 457
>gi|426238043|ref|XP_004012967.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Ovis aries]
Length = 680
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 223/543 (41%), Gaps = 107/543 (19%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A Y + + + L V LV
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKTRAAA---YVAKRHLETVDGAKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q + + + + T G + + ++++L+ ++L L
Sbjct: 61 TQHYEEFSRMLDRRWTITTLSGD---MGPRAGFGHMARRHDLLICTAELLQKALASPEEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +LL+ DECHH + Y I+ + + + + +P++ G+TASP G
Sbjct: 118 EHVELNAFSLLVVDECHHTH--KDTVYNIILSRYLELKLQRTRPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQYGPVINDTSSSY--- 285
++ + + + NL ++ S E + L+ P QY T +
Sbjct: 176 STLKGAIDHVLQLCANLDTWRIMSPQEHSPQLQEHSHQPC---KQYDLCHRHTQDPFGDM 232
Query: 286 -----------------------VTCSEQLAEIKR--------EQYISALS-RKLHDHQS 313
T +Q+ E+ + EQ + AL R+ +D
Sbjct: 233 LKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYNDALL 292
Query: 314 LRNTTKQLNRLHDSMK--FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
+ +T + ++ L D+++ + E G LHA LL+ + +NEL
Sbjct: 293 IHDTVRAVDAL-DTLRDFYNRERATKTGVLHAERWLLALFDDHKNEL------------A 339
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFV 431
R A+ E +EVL E K+ FR + I+F
Sbjct: 340 RLATSGPEN--------------PKLEVL-EAILQKQ----------FRSPDSPRGIIFT 374
Query: 432 NRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGE 484
+A +L LQ L + V + AG S M++ + +++KFR+G
Sbjct: 375 RTRQSAHSLLLWLQQQPGLQTVGIRPQVLIGAGNNSQKTQMIQMTQRDQQEVIQKFRTGT 434
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---Q 541
LNLLVAT V EEGLDI C +V+R+ L S +Q+RGRAR QS Y+F+ G+ Q
Sbjct: 435 LNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAQGSRELQ 494
Query: 542 REL 544
REL
Sbjct: 495 REL 497
>gi|156401322|ref|XP_001639240.1| predicted protein [Nematostella vectensis]
gi|156226367|gb|EDO47177.1| predicted protein [Nematostella vectensis]
Length = 689
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 234/514 (45%), Gaps = 59/514 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ EL +KA+E N ++ T GKT++A+ + HL +K + + +F+ TV LV
Sbjct: 4 RGYQKELSEKALEGHNTVICAPTNSGKTYVALNIARN--HLDKKKEGKV-LFIVSTVNLV 60
Query: 119 QQQAKVIEESIGFK--VRTFCGGSKRLKSHCD--WEKEIDQYEVLVMIPQILLYCLYHRF 174
QQQ + + + K V+ G + CD + V+V+ Q++L C+
Sbjct: 61 QQQTERFKLYLQDKYIVKDISGSNG-----CDIPLSGLLGSSHVVVLTAQVML-CILVNA 114
Query: 175 IK-----MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-----MKVPRIFGMTASP 224
+K + ++LL+FDECHH Q +HPY KIM+++ + M P+I G+TAS
Sbjct: 115 LKDGSLQLSSVSLLVFDECHHTQ--KDHPYNKIMENYMTLRLQPAHSMPTPQIVGLTASL 172
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESF---VSSPVVRVYQYGPVINDT 281
VGK + + N+ V +V+D +LE V +P V+ D
Sbjct: 173 GVGKAKNTLEAQHHILEVCANMDAQHVVTVQDETNLEELRLHVGTPQRTVHSVTCDRTDV 232
Query: 282 SSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGAL 341
S + + + E+ Y+ S ++ + Q R +C E L G
Sbjct: 233 FESVIGKAMEQVEL----YVKGTPVDTDMPPSGKDYSSQQYR-----HWC-ETLYTQGIK 282
Query: 342 HASYILLSGDETMR---NELIEAEGNTIDDSLCRFASQASEV----FAAICRRDGIASDL 394
++ L++ E +R L + D++ ++ + + F + R+ +
Sbjct: 283 QSNRYLVTYAEQLRVYNVALTIKDATRSKDAMAHLSNYFNHLDEDRFTVVDRKLKKIYEK 342
Query: 395 SCIEVLK---EPFFSKKLLRLIGILSTFRLQQ------HMKCIVFVNRIVTARALSYILQ 445
+ E ++ EP + KL++L +L + + H K I+F + AL ++
Sbjct: 343 AITEAIQLHGEP-RNPKLVKLQELLLDYHKGETESGLDHAKGILFSKTRESTIALEKWIK 401
Query: 446 NLKFLASWRCHF-LVGVNAGLKSMSRNAMKSILEKFRSG-ELNLLVATKVGEEGLDIQTC 503
L+ LVG + G M++ + ++ KFR+G E N+++AT V EEGLDI C
Sbjct: 402 ETPELSQELMPLRLVGNSDGRGGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDC 461
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQ-SEYAFLV 536
VIR+D+ S +QSRGR R +Y+ +V
Sbjct: 462 SYVIRYDMMGNEISSVQSRGRVRTKTGGQYSVVV 495
>gi|297794785|ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
gi|297311112|gb|EFH41536.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
lyrata]
Length = 786
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 187/447 (41%), Gaps = 75/447 (16%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
M T+E +L + F ++ LL +A L ++RLEFLGD+VL+ + +Y++ YP L
Sbjct: 4 METVEKILNYSFKNKTLLKEAIT------LSPRFKRLEFLGDSVLEVALANYIHHAYPNL 57
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFD-SNVLSETINNYVDYMITPSSTREVK 1330
K +L DLR+ VNN+ FA V + Y+F+I + S+ SE I + + +
Sbjct: 58 KLQELCDLRTANVNNEKFARATVKHNLYQFIIGEKSSSPSEKIKEFSEAVSKEDVPVPYG 117
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVW---------------------------K 1363
PKVLGD+VES GA+ +D F++ W +
Sbjct: 118 GLVEAPKVLGDIVESIAGAVYIDVDFDVQRFWEVCCVCLFFITFVFLISMLLIKREEFLQ 177
Query: 1364 IMLSFLDPILKFSNLQLNPIRELLELCNSYD-----LDLQFPSLKKGGKFLAEAKVTGKD 1418
I L+PI +LQ+ P L L D +D ++ + +AE + G
Sbjct: 178 IFRGLLEPIYTLDDLQMQPKPPFLTLFRLADKHGKRIDFRYSKDDHSKENIAEVYLDG-- 235
Query: 1419 KDVFI-SACATNLSRKEAIRIASQQLFSKLKAAGY-----------VPKTKSLESILKSS 1466
+FI S C +LS + +A+++ KL + T+ L ++S
Sbjct: 236 --IFIASGCTKSLSVAKV--LAAEEAVQKLSEYDVEIENVKRKLIEICSTEKLRLPIESF 291
Query: 1467 --PKSEARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSA-- 1522
P + + + T +V +D +L+ ++ + C I L T +A
Sbjct: 292 SLPTASENPVTDEMTQEQMVIDEDCPHVELEDAKRKLIDICSIEKLRLPTESFSLPAAYE 351
Query: 1523 --------------RSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKI 1568
+ +L+++C N W P + +E G + + F V +EI E
Sbjct: 352 NPLTDEIKQVPGYPKGKLHKICVKNKWPFPIYRIEEERGPKNEQKFVCSVKIEIPNIEGS 411
Query: 1569 IECIGEPQAKKKGAAEHAAEGMLWCLE 1595
G+ + KKK A +A M+ LE
Sbjct: 412 FHMKGDAKPKKKEAENSSAYHMIRALE 438
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 1206 LSASLD---MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+S+ +D + +E +L + F ++ LL +A S +Q+L F+G A L IT+
Sbjct: 463 VSSEMDSDSVKAVEKILNYVFTNKNLLKEALRQTS-----SLFQKLRFVGRAALVLAITN 517
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI--FDSNVLSETINNYVDYM 1320
++Y YP +P +L L+ N+ A VAV + ++F I F S E + V
Sbjct: 518 HIYLRYPNFEPRELELLQRGNTCNKTLARVAVKHNIHQFFIGQFKSEKKIEAFSKVVGKE 577
Query: 1321 ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
P + E R VL DLVES GA+ +D F++ +W+ +P+ +L+L
Sbjct: 578 DDPVPSDGRSE--RTTNVLSDLVESVAGAVYIDMNFDIKRLWESFRGLFEPLYTLDDLRL 635
Query: 1381 NP 1382
P
Sbjct: 636 RP 637
>gi|320585938|gb|EFW98617.1| RNA helicase rnase [Grosmannia clavigera kw1407]
Length = 2671
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 11/175 (6%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R YQLE+ ++++++NIIV + TG GKT +A+L I L R P K I FLA TV L
Sbjct: 75 SRAYQLEMFEESLKKNIIVAMDTGTGKTRVAILRIR--TELERSPLK-IVWFLATTVFLC 131
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ K I I G + + G G + W+ + ++V Q+LL ++H F+
Sbjct: 132 DQQFKAIVSQIPGAQAKIITGQSGVDAWSTQAVWDAVLLNVRIVVATHQVLLDAMHHGFV 191
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVG 227
K+ I+LL FDE HA VK H +IM +FY P + + VP I GMTASPV G
Sbjct: 192 KISSISLLAFDEA-HACVK-EHAGKRIMSEFYYPALNRGEVVPAILGMTASPVHG 244
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 145/351 (41%), Gaps = 62/351 (17%)
Query: 987 SLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
+L+P +M LE LVA EL L S E ++ A++ + + E LE +G
Sbjct: 1043 ALIPPLMQVLEVHLVAAEL--LSSTRLRELPVSDRSLITTAISAPAARLHDNYEVLEFIG 1100
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
DA LK + + EG L+ + V NS L + A L +I
Sbjct: 1101 DAVLKLMAAANCAAQNLDAPEGHLSLFKDRLVANSRLCRAATEFGLDRFI---------- 1150
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWL--HKKTIADVVEALVG 1164
+ SQ+ R D+ E KG L KT+ADVVEAL+G
Sbjct: 1151 ------------------VGSQWSLREWRDVKIEAEEEKGGEQLVMSTKTLADVVEALIG 1192
Query: 1165 AFIDDSGFKAATAFLK--------WIGIQVEFEASQVTNICISSKSF---LPLSASLDMA 1213
A + D G A ++ W+ + E ++ T + K +P
Sbjct: 1193 AALVDGGLTRALECMRILLPERQPWLSL----EKTRATLFAAAPKQTTWRIP-------T 1241
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
TLE LLG+QF LL +A HPS R GGC +RLEF+GDAVLDY+I L
Sbjct: 1242 TLEELLGYQFRRPSLLAEAMTHPSTPGIREGGCMERLEFIGDAVLDYVIVQRLLGG---- 1297
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
K G+ DL ++ V+ +F F + ++ SE D +T
Sbjct: 1298 KGGKRLDLEHQKMH--LLRTTVVNAAFLGFAAMEFSISSEASTVTADGTVT 1346
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 143/372 (38%), Gaps = 66/372 (17%)
Query: 405 FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKFLASWRCHFLVGVN- 462
S K+L+L+ IL ++ IVFV A L+ +L + + +R +VG++
Sbjct: 422 LSAKVLKLVEILEACEARRPTG-IVFVKERPMAAVLARVLSLHPRLHGRFRAGHVVGMSQ 480
Query: 463 -------AGLKSMSRNAMKSILEKFRSGE--------------LNLLVATKVGEEGLDIQ 501
A L R + L+ FR G +NLLVAT V EEG+D+
Sbjct: 481 MYTDVYEAALVLNPRKGSQEALQLFRGGAEAGEAGRGRREGSGINLLVATSVMEEGIDVP 540
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
C LV+ D ++ ++IQ RGRAR S+ L+ + L + + E M R
Sbjct: 541 ACNLVVCIDELTSLKAYIQRRGRAREENSQMHLLLGEDLRGRRALTHEWEELEHEMKRRY 600
Query: 562 MDRTSSDAFTCSEERIYKVD-----------SSGACISAGYGVSLLHRYCSKLPHDEFFN 610
D A + R +D S+ A + A + L +C+ F +
Sbjct: 601 EDGLRELADLDGQPRDDGLDDENIMPPLEVASTQAKLGARDAKNHLDHFCATSTSARFVD 660
Query: 611 PKPKFY---------YFDDLGGTICH------------IILPANAPIHQIVGTPQSSM-- 647
+P + Y D G + LP P H + +
Sbjct: 661 WQPVYILEEYEGDGEYDGDFNGIFTRGTFASPRLLRATVQLPITLPAHLRRACSKYAWRQ 720
Query: 648 -EAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEM 706
E A DA +A + L+ G + D LLP + ATED+ + + EG +H
Sbjct: 721 EEDACADAAFQAYKALYAAGLIGDNLLPPK--ATEDDGLA----GRTIEGRPGVVTVHAR 774
Query: 707 LVPAV-LRQSWT 717
P L Q+WT
Sbjct: 775 QRPWTKLAQAWT 786
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 1226 RGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
R L+ A P+ RL Y+ LEF+GDAVL + + + G L+ + LV
Sbjct: 1075 RSLITTAISAPA-ARLHDNYEVLEFIGDAVLKLMAAANCAAQNLDAPEGHLSLFKDRLVA 1133
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVES 1345
N A + +F++ L E + D I + ++ K L D+VE+
Sbjct: 1134 NSRLCRAATEFGLDRFIVGSQWSLRE----WRDVKIEAEEEKGGEQLVMSTKTLADVVEA 1189
Query: 1346 SLGAILLDSGFN 1357
+GA L+D G
Sbjct: 1190 LIGAALVDGGLT 1201
>gi|431902875|gb|ELK09090.1| Putative ATP-dependent RNA helicase DDX58 [Pteropus alecto]
Length = 929
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 241/553 (43%), Gaps = 63/553 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL A +N I+ TGCGKT +++L+ + QK +F A V +
Sbjct: 243 RGYQLELALPAKNGKNTIICAPTGCGKTFVSLLICEHHLQKFPQGQKGKVVFFAVQVPVY 302
Query: 119 QQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E G+KV G + + E+ I+ +++++ PQIL+ L + +
Sbjct: 303 EQQKSVFSKYFERRGYKVSGISGAT---AENVSVEQIIEDNDIIILTPQILVNSLKNGTV 359
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ +HPY IM ++ + +P++ G+TAS VG
Sbjct: 360 PSLSVFTLMIFDECHNTS--KHHPYNMIMFNYLDQKLGGSSDSLPQVVGLTASVGVGDAK 417
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
S L +L + V +V+D E+LE V P ++ + ++ C
Sbjct: 418 STGEALEYICKLCASLDISVVATVKDNLEELEEVVYKP----QKFFRKVESRTTDRFKCI 473
Query: 290 EQLAEIKREQYISALSRKLHDHQ---SLRNTTKQLNRLHDSMKF----------CL---- 332
++++ +E +L++ + D +L N ++ NR + K+ C+
Sbjct: 474 --ISQLMKE--TESLAKSIFDTLGTITLGNFSQIQNRNFGTQKYEQWIVAVQKKCMVLKM 529
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA----- 383
E +C AL ++ S + LI +E + D+L V A
Sbjct: 530 PDKDEESRICKAL---FLYTSHLRKFNDALIISEHARMKDALDYLKDFFRNVRTAGFDET 586
Query: 384 ---ICRR-DGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTAR 438
+ RR + +L I + + KL L +L + L + I+FV
Sbjct: 587 EQDLTRRFEEKLQELESIS-MDPSNENPKLKDLCFVLQEEYHLNPETRTILFVKTRALVD 645
Query: 439 ALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGE 495
AL ++ L+ + L G ++ M+ A K +L F+ SG+ +L+AT V +
Sbjct: 646 ALKKWIEENPKLSFLKPGILTGRGRTKQNIGMTLPAQKDVLHTFKTSGDNKILIATSVAD 705
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEED 555
EG+DI C LVI ++ V IQ+RGR R S+ L + + E + I + +E
Sbjct: 706 EGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNSDVIEKEKINIY--KEK 763
Query: 556 RMNREIMDRTSSD 568
MN I+ + D
Sbjct: 764 MMNDSILRLQTWD 776
>gi|448732248|ref|ZP_21714529.1| Hef nuclease [Halococcus salifodinae DSM 8989]
gi|445804821|gb|EMA55051.1| Hef nuclease [Halococcus salifodinae DSM 8989]
Length = 816
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 231/532 (43%), Gaps = 79/532 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+EL ++A + +V L TG GKT +++L+ H + + LAPT LV
Sbjct: 22 RQYQVELAREAARGHTLVCLPTGLGKTTVSLLVTANRLHEV----GGTALLLAPTKPLVT 77
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ E++ ++ F G + D E+ ++ V++ PQ++ L I
Sbjct: 78 QHAEFYREALTIPDEEIVVFTGEVR----PDDREELFERARVVIATPQVIENDLIGGRID 133
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
++ L FDECH A + + Y + + Y D + P + GM+ASP G +A
Sbjct: 134 LDSTTHLTFDECHRASGEYAYNY---IAERYHAD-SEAPLVTGMSASP----GGDEEA-- 183
Query: 237 PKSINSL-ENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
I S+ ENL A V + ED D+ + D VT +++
Sbjct: 184 ---IRSVCENLGLATVTVMTEDDADVAEYTHR------------TDVEWERVTLPDEILA 228
Query: 295 IKREQYISALSRKLHDHQSL---RNTT-----KQLNRLHDSMKFCLENLGVCG----ALH 342
I R+ ++ + +L + L R+T+ + LNR+ ++ ++N G ++H
Sbjct: 229 I-RDALVAVIEDRLEGLKELGVTRSTSADISQRDLNRIRSELQQLIDNDQSEGYEGMSIH 287
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGI 390
A + L R + AE +++ SL R+ AS+A++ FA+ +
Sbjct: 288 AEVMKL------RRAVTLAETQSVE-SLRRYFERQRNAARSSGASKAAQRFASEAKVRDA 340
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
+ L F ++L + T ++ + IVF TA L+ L F
Sbjct: 341 MDQAERFDDLHPKFRRARIL----LAQTLGIEDGERVIVFTESRDTAETLTDFLGE-HF- 394
Query: 451 ASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
S R G G M++ + L++FR+GE +LV+T V EEGLD+ LV+ ++
Sbjct: 395 -STRKFVGQGDKEGSDGMTQKEQQETLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYE 453
Query: 511 LPETVASFIQSRGR-ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
T IQ +GR R + L+ + E K+ EE RM E+
Sbjct: 454 PVPTAIRSIQRKGRTGRQTEGRVMVLLAEDTRDEAYFWKS-RHEESRMEDEL 504
>gi|449528774|ref|XP_004171378.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 453
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 196/446 (43%), Gaps = 62/446 (13%)
Query: 527 MPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAF---TCSEERIYKVDSS 583
M S+Y +V SG+ L ++ + + M E + S + +E Y V+S+
Sbjct: 1 MKNSDYILMVKSGDSTTLSRLQRYLASGEIMRNESLCHASLPCVPFRSDYDEESYYVEST 60
Query: 584 GACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTP 643
GA ++ V L++ YCS+LP D +F P P++ C + LP ++P+ +
Sbjct: 61 GAVVTLSSSVGLIYFYCSRLPSDCYFKPTPRW------DKETCTLHLPKSSPLQTF--SS 112
Query: 644 QSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRGEL 703
+ + +K+ ACL+A + LH GAL D L+PQ + + +S + E +
Sbjct: 113 KDDAKYSKQSACLEACKQLHTCGALTDNLVPQ----------IVAEESVAQEWNKPLDDE 162
Query: 704 HEMLVPAVL------RQSWTKSQYPVRL--NFYFMQFIPDPADRIYREFGLFVKSLLPGE 755
+ VP S Y + L NF++ D L +++ L E
Sbjct: 163 QPIYVPPEFVHCCPHNSSVVYHCYLIELKQNFHY--------DISAHNIVLAMRTELEFE 214
Query: 756 AEHLKVDLHLARGR-------SVMTKLVPSGIMQAQQFQEMFLKVIL-----DRSEFNSE 803
+ + DL + RG + KL P ++ ++QFQ +V+L D+ N+E
Sbjct: 215 VQSMCHDLDVDRGSFDVNFKYVGIIKLSPEQVLLSRQFQRTIFRVLLNHTWTDKLSENNE 274
Query: 804 FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCL-SSPVFGTPGGSVDRKSLPSH 862
+ LG + YLLLP + W+I+ L SS + G K +
Sbjct: 275 -ICLGDGPRVD------YLLLPST-GGELISWEIVLSVLVSSREYCVHRGISSSKDVSYD 326
Query: 863 GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYK--DSDSSSHVDHLIS 920
P + +G ++NS+VY H Y +T+++ E NG S K ++ ++ ++
Sbjct: 327 VPTK--SGLVCICRLQNSVVYTPHNDHVYCITSVLSELNGNSLLKIRKNEMMAYKEYYKV 384
Query: 921 SYGIHLKHPKQPLLRAKPLFRLRNLL 946
+GI L+ KQPLLR K +F + N +
Sbjct: 385 RHGIDLRFEKQPLLRGKKIFPVHNYI 410
>gi|312069940|ref|XP_003137916.1| type III restriction enzyme [Loa loa]
gi|307766923|gb|EFO26157.1| type III restriction enzyme [Loa loa]
Length = 1032
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 142/547 (25%), Positives = 234/547 (42%), Gaps = 77/547 (14%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQK-SICIFLAPTVAL 117
R YQ EL A N I+ TG GKT +A +I E ++ K S L PT+ L
Sbjct: 290 RPYQQELVATACRGVNTIICAPTGSGKTVVAAHIILEHFRTMKAADKPSRVAILVPTIPL 349
Query: 118 VQQQAKVIEESIGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V+QQ ++ + +TF GS+ + + + + V V PQI + L R
Sbjct: 350 VEQQCIMLNRYLR---KTFWVDGMSGSEPVDENGRAPNVLASH-VTVFTPQIFINLL--R 403
Query: 174 FIKMEL------IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
I+ + ++ IFDECHH +HPY +M+ ++ D K P+I G+TAS +G
Sbjct: 404 SIRRDDRLYFTDFSMFIFDECHHCD--GDHPYHVLMRMLHRFDGPK-PQIVGLTASLPLG 460
Query: 228 KG-ASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQ-YGPVINDTSSS 284
G A+ +A L ++ L + +V + E+L FV PV + + + P + S
Sbjct: 461 AGRANVEAALDHMMDLCAKLSAHSISTVRKHMENLRYFVKPPVDDIKRAHRPEYDSFCQS 520
Query: 285 YVTCS-----------EQLAE-------------------IKREQYISALSRKLHDHQSL 314
C E++AE ++ E ++ L +L +
Sbjct: 521 LEICMRKIEFAAKPELEKIAENKVINFRVEETAFPVQKSSMRYENFVGGLKNRLAELPGG 580
Query: 315 RNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELI--EAEGNTIDDSLCR 372
+ QL ++ + + + L + L Y E M E+ + TI + L +
Sbjct: 581 K-VKHQLIKMLEHLGYYYRALCLSDLLPNWYAYSYLRENMAKEIFPDRRDSTTIQNQLKK 639
Query: 373 FASQASEVFAAICRRDGIASDLSCIEV----LKEPFFSKKLLRLIGILSTFRLQQHMKCI 428
+ + + + +++ L+E + S R I ++T RL Q++
Sbjct: 640 LFEKFVKPNELNFKESDSGEEKEILKMLHTILREQYVSDPASRTIIFVTTRRLAQYLSHH 699
Query: 429 VFVNRIV--TARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELN 486
+ +IV T RA+ ++ +S R L G A ++++E F G L
Sbjct: 700 LNTVKIVDGTNRAVGFV------TSSNRSSALSGQTA-------EEQRTVIENFNQGTLK 746
Query: 487 LLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL 546
+LVAT V EEGLDI C L+I+++ + S IQ RGRAR S L G+ E +L
Sbjct: 747 VLVATSVAEEGLDISACNLIIKYNNTGSERSLIQRRGRARARHSRSILLALDGSIEEKEL 806
Query: 547 IKNFSKE 553
+N KE
Sbjct: 807 -ENIQKE 812
>gi|410897044|ref|XP_003962009.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Takifugu rubripes]
Length = 919
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 232/553 (41%), Gaps = 81/553 (14%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP---QKSICIFLAPTV 115
R YQ+++ + A+E +NII+ L TG GKT AV + + HL + Q L +
Sbjct: 223 RDYQMKVVRPALEGKNIIICLPTGWGKTRAAVYVAKK--HLDSRKAAGQTGKVAVLVNKI 280
Query: 116 ALVQQQAKVIEESIGF-----KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
LV+Q E + F KV G S+ S D ++ D V++ QIL L
Sbjct: 281 PLVEQHYSA--EFLPFLKPMYKVERVSGASQLKISFVDTLRKND---VIICTAQILENYL 335
Query: 171 YH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI------------M 212
+ + ++L+I DECHH Q + Y +IM + K I +
Sbjct: 336 DRSRTGEDEGVNLSDLSLIIVDECHHTQKEG--VYNEIMVRYLKQKIKNAKLKKEQKPTV 393
Query: 213 KVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRV 271
+P+I G+TASP VG + + NL +K+ ++ D +S + V
Sbjct: 394 PLPQILGLTASPGVGGATKLDKAVEHILRICANLDASKIMTLPPDQLKRDSKKTVKPVED 453
Query: 272 YQYGPVINDTSSSYVTCSEQLAEIK---------REQYISALSRK--LHDHQSLRNTTKQ 320
+ P D + A++K EQ++ + RK L +R +
Sbjct: 454 RKEDP-FGDVIKKIMNAIHYHAQLKPNGDLGSQIYEQWVVQMERKAVLEGDHKVRACAEH 512
Query: 321 LNRLHDSMKFCLENLGVCGALHA----SYILLSGDETMRNELIEAEGNTID-DSLCRFAS 375
L + + E LG+ + +++ +E M+N+ E I RF
Sbjct: 513 LRQYN-------EGLGLSNTIRMWDALNFLNKYHEEEMKNKTTPDEEQVIQITDTERFLF 565
Query: 376 QASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLI--GILSTFRLQQHMKCIVFVNR 433
+ + + + P + K L ++ IL F +Q + IVF
Sbjct: 566 NLFKEYKEELHK-----------LANNPDYENKSLSILRTKILQEFSTRQDARGIVFTKT 614
Query: 434 IVTARALS-YILQNLKFLA-SWRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLV 489
A AL+ +I +N KF + +++G + +K M+ K +L KFRSGE+NLL+
Sbjct: 615 RRVAIALTQWIQENPKFADLDVKAAYVIGGGDQSVVKPMTAAEQKDVLTKFRSGEVNLLI 674
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-VDSGNQRELDLIK 548
AT V EEGLDI C +VIR+ S IQ+ GR R S Y + V E + +
Sbjct: 675 ATSVAEEGLDIPKCNVVIRYGHVGNEISMIQTEGRGRAEDSTYTVVDVKDSGVAEKECVN 734
Query: 549 NFSKEEDRMNREI 561
+ K D MN+ I
Sbjct: 735 EYRK--DMMNKAI 745
>gi|440903247|gb|ELR53934.1| Putative ATP-dependent RNA helicase DHX58 [Bos grunniens mutus]
Length = 677
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 233/521 (44%), Gaps = 66/521 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI----CIFLAPT 114
R YQ E+ A+E +NII++L TG GKT A A++ R+ +++ + L
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKTRAA-------AYVARRHLETVDGAKVVVLVNR 56
Query: 115 VALVQQQ----AKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
V LV Q ++++E + + T G + + ++++L+ ++L L
Sbjct: 57 VHLVTQHCEEFSRMLERR--WTITTLSGD---MGPRAGFGHVARRHDLLICTAELLQKAL 111
Query: 171 Y----HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTAS 223
+++ +LL+ DECHH + Y I+ + + + + +P++ G+TAS
Sbjct: 112 ASPEEEEHVELNAFSLLVVDECHHTH--KDTVYNIILSQYLELKLQRTRPLPQVLGLTAS 169
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSS 283
P G ++ + + + NL ++ S +D SP ++ + + P
Sbjct: 170 PGTGGASTLEGAIDHVLQLCANLDTWRIMSPKD--------HSPKLQEHSHQPC-----K 216
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQL-NRLHDSMKFCL-ENLGVCGAL 341
Y C + + + + L ++HDH + + + ++ L ++ G L
Sbjct: 217 QYDLCHRRTQDPFGD-MLKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLL 275
Query: 342 ----HASYILLSGDETMRNELIEAEG--NTIDDSLCRFASQASEVFAA----ICRRDGIA 391
+A ++ D + ++ + A NT+ D R + +++ A + D
Sbjct: 276 EQRVYALHLRRYNDALLIHDTVRAVDALNTLRDFYNRERTTKTQILHAERWLLALFDDHK 335
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
++L+ + + KL L IL FR + I+F +A +L LQ L
Sbjct: 336 NELAHLATSGPE--NPKLEVLEAILQKQFRSPDSPRGIIFTRTRQSAHSLLLWLQQQPGL 393
Query: 451 AS--WRCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
+ R L G N+ M + + +++KFR+G LNLLVAT V EEGLDI C +V
Sbjct: 394 QTVDIRPQVLTGAGNNSQKTQMIQMTQQEVIQKFRTGTLNLLVATSVAEEGLDIPQCNVV 453
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
+R+ L S +Q+RGRAR QS Y+F+ G+ QREL
Sbjct: 454 VRYGLLTNEISMVQARGRARASQSVYSFVAAQGSRELQREL 494
>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 107 bits (268), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 133/525 (25%), Positives = 220/525 (41%), Gaps = 113/525 (21%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL-KALTTEKCQERFSLERLEILG 1046
LLPSI+HR ++A L+ L P + + +LL +AL + + +RLE LG
Sbjct: 514 LLPSILHRFGMAIIAETLRTTLLG--PVALDSAHSLLLTRALKSSAADGNDNYQRLEFLG 571
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D LK+ HL + E LT ++ V+N L + L ++ + F ++
Sbjct: 572 DCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMITKSFTGAKW 631
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR Y G + V+ + K IAD++E+L+GA
Sbjct: 632 ------APR-------------YAGDLLAETGPAVKEERS-----SKLIADIIESLIGAC 667
Query: 1167 IDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
GF+ A ++ WI + A+ + + +++ L + + LE L+
Sbjct: 668 YTVGGFEKAVLCVQTLLPLEPWISVPA---ANSILHEAAPAEADL-----MGLDVLETLI 719
Query: 1220 GHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LLL+A H SF+ + Y+RLEFLGDAVLDY+I+ L++ P+L ++
Sbjct: 720 GYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPELSHQKMH 779
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETIN----------------------- 1314
+R+ VN SF F +F++ + ETIN
Sbjct: 780 AIRTATVN----------ASFLAFRLFETTIDEETINKTSMRPESQKRAIWQFLRSGSPS 829
Query: 1315 ---NYVDYMITPSSTRE-----VKEGPRC----------PKVLGDLVESSLGAILLDSGF 1356
N + + R+ + E R PK L D+VES +GA+ +DS
Sbjct: 830 LNANRDNALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDSLG 889
Query: 1357 NLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSL------KKG 1405
++ T I +L LD IL L+P L L + D +Q+ + +G
Sbjct: 890 DILTCEAIVRRLGILDCLDHILCNGVDCLHPKERLGHL--AVDKGVQYARVGMNTEPNEG 947
Query: 1406 GK-FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
K + + KV G+D + A L R A +A+ + L++
Sbjct: 948 DKMYKCQVKVGGED----VGDVAEGLKRLNAETVAAWKAVGVLES 988
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 17/151 (11%)
Query: 405 FSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYIL----QNLKFLASWRCHFLV 459
S KL LI L + + C+VFV + V ++ +L + L R V
Sbjct: 129 MSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACIAEVLAIHPETRDLL---RVGTFV 185
Query: 460 GVN------AGLKSMS--RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
G + A + S+S RN ++ LE FR+G+LNL++AT V EEG+D+ +C LV+ F+
Sbjct: 186 GESENSKRKANIASISEPRN-QQATLENFRAGKLNLILATSVLEEGIDVSSCHLVVCFES 244
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
P+ + SF+Q RGRAR +S+Y V +R
Sbjct: 245 PKNLKSFVQRRGRARKEESKYVIFVPQAGRR 275
>gi|351699900|gb|EHB02819.1| Putative ATP-dependent RNA helicase DHX58 [Heterocephalus glaber]
Length = 678
Score = 107 bits (268), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 217/524 (41%), Gaps = 76/524 (14%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E N+I++L TG GKT A Y + ++ + L V LV
Sbjct: 4 RPYQWEVIMPALEGRNVIIWLPTGTGKTRAAA---YVAKRHLETVDRAKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q A+ +G + + T G + + + +++L+ ++L L
Sbjct: 61 TQHAEEFSLMLGGRWAMTTLSGD---MGARAGFGHGARSHDLLICTAELLQMALSSTQEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y I+ + + + + +P++ G+TASP G
Sbjct: 118 EHVELTAFSLIVVDECHHTH--KDTVYNVILSQYLEHKLRQQWPLPQVLGLTASPGTGGN 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSPV------VRVYQ--YGPVIND 280
+ Q + + NL ++ S E L P R Q +G +I
Sbjct: 176 SKLQGAIEHILQLCANLDTWRIMSPETYRPQLLEHRPQPCKKYDLCQRRSQDPFGDLIKK 235
Query: 281 TSSSYVTCSEQLAEIKR-------EQYISALSRKLHDH--QSLRNTTKQLNRLHDSMKFC 331
+ C E + ++ R EQ++ L + + Q R L R +D++
Sbjct: 236 LMAQIHDCPE-MPDLSRDFGTQMYEQHVVELCQTAAEGGLQQRRVLALHLRRYNDAL-LI 293
Query: 332 LENLGVCGALHASYILLSGDETMRNELIEAEGNTI------DDSLCRFASQASEVFAAIC 385
+ + AL + + T + +++ E + D L R A+ E
Sbjct: 294 HDTVRAVDALASLRGFYDRERTTKTQILPTEHWLLALFYDHKDELTRLATHGPE------ 347
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYIL 444
+ KL L IL T F + + IVF +A +L L
Sbjct: 348 --------------------NPKLDMLEQILQTQFGGSANPRGIVFTRTRQSAHSLLLWL 387
Query: 445 QNLKFLASW--RCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
Q L R L+G ++ M++ + ++ KFR G LNLLVAT V EEGLDI
Sbjct: 388 QQQPGLRGMDIRAQMLIGAGNSSQCTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDI 447
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
C +V+R+ L S +Q+RGRAR QS Y+F+ G+ REL
Sbjct: 448 AKCSVVVRYGLLTNEISMVQARGRARASQSVYSFVATEGS-REL 490
>gi|363992266|gb|AEW46678.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pteropus alecto]
Length = 929
Score = 107 bits (267), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 243/560 (43%), Gaps = 77/560 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQLEL A +N I+ TGCGKT +++L+ + QK +F A V +
Sbjct: 243 RGYQLELALPAKNGKNTIICAPTGCGKTFVSLLICEHHLQKFPQGQKGKVVFFAVQVPVY 302
Query: 119 QQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ V E G+KV G + + E+ I+ +++++ PQIL+ L + +
Sbjct: 303 EQQKSVFSKYFERRGYKVSGISGAT---AENVSVEQIIEDNDIIILTPQILVNSLKNGTV 359
Query: 176 -KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM----KVPRIFGMTASPVVGKGA 230
+ + L+IFDECH+ +HPY IM ++ + +P++ G+TAS VG
Sbjct: 360 PSLSVFTLMIFDECHNTS--KHHPYNMIMFNYLDQKLGGSSDSLPQVVGLTASVGVGDAK 417
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDA-EDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
S L +L + V +V+D E+LE V P ++ + ++ C
Sbjct: 418 STGEALEYICKLCASLDISVVATVKDNLEELEEVVYKP----QKFFRKVESRTTDRFKCI 473
Query: 290 EQLAEIKREQYISALSRKLHDHQ---SLRNTTKQLNRLHDSMKF----------CL---- 332
++++ +E +L++ + D +L N ++ NR + K+ C+
Sbjct: 474 --ISQLMKEA--ESLAKSIFDTLGTITLGNFSQIQNRNFGTQKYEQWIVAVQKKCMVLKM 529
Query: 333 ----ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA----- 383
E +C AL ++ S + LI +E + D+L V A
Sbjct: 530 PDKDEESRICKAL---FLYTSHLRKFNDALIISEHARMKDALDYLKDFFRNVRTAGFDET 586
Query: 384 ---ICRR-DGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTAR 438
+ RR + +L I + + KL L +L + L + I+FV
Sbjct: 587 EQDLTRRFEEKLQELESIS-MDPSNENPKLKDLCFVLQEEYHLNPETRTILFVKTRALVD 645
Query: 439 AL-SYILQN--LKFLASWRCHFLVGVNAGLKSMSRN------AMKSILEKFR-SGELNLL 488
AL +I +N L FL G++ G +N A K +L F+ SG+ +L
Sbjct: 646 ALKKWIEENPKLSFLKP-------GISTGRGRTKQNIGMTLPAQKDVLHTFKTSGDNKIL 698
Query: 489 VATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
+AT V +EG+DI C LVI ++ V IQ+RGR R S+ L + + E + I
Sbjct: 699 IATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTSNSDVIEKEKIN 758
Query: 549 NFSKEEDRMNREIMDRTSSD 568
+ +E MN I+ + D
Sbjct: 759 IY--KEKMMNDSILRLQTWD 776
>gi|393215463|gb|EJD00954.1| ribonuclease III [Fomitiporia mediterranea MF3/22]
Length = 1411
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 135/277 (48%), Gaps = 33/277 (11%)
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP-- 1205
WL K +ADV EA++GA G + A K + + V + ++ K+ P
Sbjct: 1047 QWLGDKAVADVAEAIIGAAYVTGGREIALKVTKALNVPVP-HIDRWSDF--GRKALAPPP 1103
Query: 1206 -LSASLDMATL---EILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYL 1259
++A L ++ E ++GHQF H LL QA H S N + Y+RLEF+GDA+LD+L
Sbjct: 1104 EVTARLRTGSIQAVEAIIGHQFNHPHLLAQALTHASIHGNEMTS-YERLEFIGDAILDFL 1162
Query: 1260 ITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDY 1319
+ ++Y L PG LT L+ +V+N A A V V ++ L+F+S+ L ++I +Y
Sbjct: 1163 VIRHIYDRDSSLSPGALTLLKGAMVSNAALAAVCVWSGLHEHLLFESSALEKSIQSYAVE 1222
Query: 1320 MIT------PSSTREVKEGPRC------PKVLGDLVESSLGAILLDSGFNL----NTVWK 1363
+ + RE ++ + PK L D+VES GA+ + F+ K
Sbjct: 1223 LEQRQLAEHEQAAREDRQPGQYWVDVEPPKALSDVVESIFGAVYVSDNFSPIGAEKFFDK 1282
Query: 1364 IMLSFLDPILKFSNLQLNPIRELLEL-----CNSYDL 1395
++ F D + L +P + L EL C +++L
Sbjct: 1283 VLAPFYDQHITLHTLSHHPTKILFELFQSQGCQNFEL 1319
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 136/535 (25%), Positives = 232/535 (43%), Gaps = 100/535 (18%)
Query: 191 AQVKSNHPYAKIMKDFYK-PDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
A+ +HP +MKDF+ D PRIFG S VV A+ ++ S+ LEN+LDA
Sbjct: 3 AKDDESHPIQLLMKDFFHVTDKKSRPRIFG---SIVVSPDATFYFDI--SLLKLENVLDA 57
Query: 250 KVYSVEDA--EDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRK 307
K + DA + + S P+ V Y P ++ + L R
Sbjct: 58 KYHGFTDATRDSILSLPDKPMELVVFYDPQVHIVDTPL------------------LKRL 99
Query: 308 L-HD-HQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNEL--IEAEG 363
L HD H SL + + + K L +G C D R L +EAE
Sbjct: 100 LVHDPHMSLFRSHFR------NSKHALSEIGACAC----------DLVWRRALKDMEAES 143
Query: 364 NTID-----DSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPF----FSKKLLRLIG 414
+ + D + S+A+ A R+ I + L + L + + K RL+
Sbjct: 144 DINEPVFEEDDELQTGSEAAIRSAKSKIRNTIKNWLFTMPNLDQSSRGFNITPKFARLME 203
Query: 415 ILSTFRLQ-QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAM 473
+L Q + I+FV + R+++Y+L +L + F+ +++ + +
Sbjct: 204 VLKACEPQGDAFRGIIFVQK----RSIAYVLADLLRTLDDQIGFIRP-----QALVGHVL 254
Query: 474 KS-ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+S +L+ FR+G NLL+ATK E+ L+I + +VIRFDL E+ S+ R RAR Q
Sbjct: 255 QSDVLDAFRTGVYNLLIATKFAED-LEICSATIVIRFDLFESQVSYAHCRARARGQQCHL 313
Query: 533 AFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS--------------DAF-------- 570
+ + G+ ++ + ++ + RM R + T+S D +
Sbjct: 314 IHMAERGSDVHRRILADVARIDRRMERWVQRVTTSVGSAIPPVPLRETVDPYRSDSDDED 373
Query: 571 TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPH----DEFFNPKPKFYYFDDLGGT-- 624
E + ++ I +++++R+ S+LP + N KP F Y + G
Sbjct: 374 NDDPESFVQDPTTSGRIFVQDAMTVVYRFASQLPAAGDVERRLN-KPLFEYEELQDGPSS 432
Query: 625 ----ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ 675
IC ++LP AP+ ++ G+P S A++ AC + +L+ LGAL+ L P+
Sbjct: 433 KTMYICTVLLPPGAPLRRVSGSPSPSRSQARRMACYQTCYELYSLGALDYRLFPR 487
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 875 SDVENSLV---YATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLIS-----SYGIH- 925
+D E++L+ +A + +Y V + + N S +DS D+L+ G
Sbjct: 704 ADSEDALIQDRWAEFTRKYYCV-RMRPDLNPLSKPQDSPREKDFDNLVEYCRARRRGFEG 762
Query: 926 LKHPKQPLLRAKPLFRLRNLLHNRKLEDSES-HELEEYFDDLPPELCQLKIIGFSKDIGS 984
L+ KQPL+ + L + L+ + +ES H +Y L PELC I S +
Sbjct: 763 LQDYKQPLIEVEVCSSLVSHLNPTARQIAESKHHPAKY---LIPELCVKSTIPAS--VYR 817
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
++SLLPSI+ +LE+ L+ +K L + F ++ LL A+++ ERLE+
Sbjct: 818 TISLLPSIISKLEDFLL---IKELNAKYFDHS--IAEYDLLAAVSSPAAFVDVDYERLEL 872
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDP 1103
LGDA+LKY +LF+ T+ EG L R ++N +LL+ A R L YI+ +P P
Sbjct: 873 LGDAYLKYLSSVYLFVTFPTLHEGALHVSRQRIISNRSLLRNANRCGLPQYIQSKPLAP 931
Score = 42.4 bits (98), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAF 1289
Y+RLE LGDA L YL + YL+ +P L G L R +++N++
Sbjct: 867 YERLELLGDAYLKYLSSVYLFVTFPTLHEGALHVSRQRIISNRSL 911
Score = 40.0 bits (92), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 1023 MLLKALTTEKCQ--ERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNN 1080
+L +ALT E S ERLE +GDA L + V RH++ ++ G LT + V+N
Sbjct: 1130 LLAQALTHASIHGNEMTSYERLEFIGDAILDFLVIRHIYDRDSSLSPGALTLLKGAMVSN 1189
Query: 1081 SNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAE 1140
+ L + + L ++ + AL + + +R + ++++ A +D
Sbjct: 1190 AALAAVCVWSGLHEHLL------FESSALEKSIQSYAVELEQRQL-AEHEQAAREDRQP- 1241
Query: 1141 VRCSKGHHWLH---KKTIADVVEALVGAFIDDSGFKAATA 1177
G +W+ K ++DVVE++ GA F A
Sbjct: 1242 -----GQYWVDVEPPKALSDVVESIFGAVYVSDNFSPIGA 1276
>gi|155212870|gb|ABT17431.1| probable ATP-dependent helicase [Halorubrum sp. TP009]
Length = 477
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 209/479 (43%), Gaps = 83/479 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----QAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP------GGDTEE 182
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
+++ L++ +V + EDA D++ + V+ Q VT +++ +I
Sbjct: 183 IETVCENLGLVNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVLDI- 228
Query: 297 REQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----ALHAS 344
R+ ++ +L + L NTT K LN++ +K ++N G + HA
Sbjct: 229 RDALNEVITDRLEKLKQLGVTNTTNPDLSQKDLNKMRGQLKQMMDNDQSDGYKGMSTHAE 288
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLSCIE 398
+ L EL+E + +S+ R+ A+++S A R + +D E
Sbjct: 289 VMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPKVRE 338
Query: 399 VLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
+++ P FSK + L T + + I+F TA AL ++FL
Sbjct: 339 AMRKAESFDGLHPKFSKARILLA---ETLGINGGERAILFTESRDTAEAL------VEFL 389
Query: 451 -ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+ LV
Sbjct: 390 SASFDVRKFVGQGDKEGSDGMSQTQQQETLDEFKNGEFEVLVSTSVAEEGLDVPEVDLV 448
>gi|405958476|gb|EKC24603.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 1198
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 10/215 (4%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ+EL + A+++ N I+ TG GKTH+A+ +I R+ FL AL
Sbjct: 505 RSYQMELAQAALQDKNCIIVAPTGSGKTHVAMKIIQNHREKRRRLNIPKVAFLVEQSALA 564
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+QQ KV +E +G KV+ G +R +S I + +VLV+ QIL+ L I++E
Sbjct: 565 EQQGKVCKEYLGCKVKVITGEKQRTESLQSLSCWIQKKDVLVITAQILVNALATGDIQIE 624
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMK---DFYKPDIMK-VPRIFGMTASPVVGKGASAQA 234
+L++FDECHH+ K HPY +IM D D K +P+I G+TAS VGK + +
Sbjct: 625 AFSLIVFDECHHSHAK--HPYNQIMAYYLDLKLEDKHKQLPQIVGLTASVGVGKAKNEEK 682
Query: 235 NLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP 267
+ + + N +DA+ V E+ +L V+ P
Sbjct: 683 AMDWIFSMMAN-MDAEELCVVEENKAELAQHVNIP 716
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 415 ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMK 474
IL F + I+FV +A+ + L + G A + ++
Sbjct: 876 ILQAFGNDADSRGIIFVRTRDLVKAIHRWMMETDDLRHLKPVMFTGAQAKSSAGGMTKVQ 935
Query: 475 SI--LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
I L F+ G +++AT V EEGLDIQ C LVIR+ + +Q+RGR R +Y
Sbjct: 936 QIDALSLFKEGRHKIVIATSVAEEGLDIQKCNLVIRYSYVSNEIAMVQARGRGRRENGKY 995
Query: 533 AFLVDSGNQ----RELDLIKNFSKEEDRMNREI 561
+ + G++ EL++I+ E MNR I
Sbjct: 996 FVVAEQGDKTAEREELNIIR-----EAMMNRAI 1023
>gi|301108992|ref|XP_002903577.1| Dicer-like 1 (DCL1) [Phytophthora infestans T30-4]
gi|262097301|gb|EEY55353.1| Dicer-like 1 (DCL1) [Phytophthora infestans T30-4]
Length = 1664
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 173/427 (40%), Gaps = 121/427 (28%)
Query: 1040 ERLEILGDAFLKYAVGRHLF-LLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLEILGD FLK +++ D EG+LT+ R + + N L + A L Y+
Sbjct: 1230 ERLEILGDTFLKLETSWYMYEQRKDIYQEGQLTQLRRDIIRNDRLNQFALAARLHHYML- 1288
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ A + P C K + G+ PD + A + W IADV
Sbjct: 1289 -------YPAEVEQHPFQCWKPSCM-------GKTPDPVVAPAK------W-----IADV 1323
Query: 1159 VEALVGAFIDDSGFKAATAFLKWIGIQVEFEAS--------------QVTNICISSK--S 1202
+EA+ GA++ G K A FLKWIG+ V S ++ + ++S+ +
Sbjct: 1324 LEAITGAYLVGQGEKGARYFLKWIGVTVLEHPSTNFARPFYPDCFPNELYDAAMTSRGGA 1383
Query: 1203 FLPLSASLDMATLEIL----------LGHQFLHRGLLLQAFVHPSFNRL----------- 1241
LPLS + +A E L L + F ++ LLL+A HPS +L
Sbjct: 1384 ELPLSLNFKVAQFEDLPKRLMLLQQRLKYTFRNKRLLLEAVTHPSVGQLVLHIDQMDANG 1443
Query: 1242 ---------------------------GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
G Y+RLE+LGDA+++YL SY + +Y K PG
Sbjct: 1444 ADGNADGNAGGDIEVMSRSQKKKKTVWKGDYERLEYLGDALIEYLTLSYAFLMYDKWLPG 1503
Query: 1275 QLTDLRSMLVNNQAFANVA-----VDQSFYKFLI-FDSNVLSETINNYVDYMITPSST-- 1326
L+ +S V+N A A VD+ + + D + Y +ST
Sbjct: 1504 SLSQWKSATVSNDALGKTALACFGVDECIFAGAVRIDRETMDRVAGIERKYARAEASTGL 1563
Query: 1327 -------------REVKEGPR------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLS 1367
+ K P PK+ D+ E+ + A+ LDSG +L V +
Sbjct: 1564 SPVFEAVGVSKKKAKSKNAPNGGNSHTLPKMFADVFEALVAAVFLDSGRDLQLVRDV--- 1620
Query: 1368 FLDPILK 1374
F+ P+L+
Sbjct: 1621 FMGPLLQ 1627
>gi|111226989|ref|XP_001134628.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
gi|90971302|gb|EAS66962.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
Length = 837
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 238/552 (43%), Gaps = 111/552 (20%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ EL +K+ME++II L TG GKT I+ L+I ++ L P K I +F+ + LV
Sbjct: 233 RDYQCELYRKSMEKDIICCLPTGLGKTLISCLVIKKMKQL--NPSKQI-VFIVDRIPLVI 289
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID---QYEVLVMIP------------Q 164
QQ+ VIE G KV L +H + K + +++VLV+I
Sbjct: 290 QQSDVIETETGLKV---------LSAHGETFKPVQLKQRFDVLVVIGDLFNKLLSNGDLN 340
Query: 165 ILLYCLY-----HRFIKMELIALLIFDE-------CHHAQVK-SNHPYAKIMKDFYKPD- 210
IL +CL H +K A L+ D+ CH + + P K KDF+
Sbjct: 341 ILSFCLIVIDEAHHIVKEHSFAKLLRDKLNTIPEICHPKILGLTASPAGK--KDFFNTLL 398
Query: 211 ----IMKVPR--IFGMTASPVVGKGASAQANL-PKSINSLENLLDAKVYSVEDAEDLESF 263
I KV R I T ++ + P N+LE +S++ +DL
Sbjct: 399 SLKLISKVSRCEIIKPTNQSIIPYINQKNIKIIPIPTNNLER------HSIQILKDL--- 449
Query: 264 VSSPVVRVYQYGPVINDT-----SSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTT 318
+ +Y P +++ S + V S L + + +H + +
Sbjct: 450 -------ISKYKPNLSNNQELFDSVTSVIDSNTLKGLGVGGGGGGSNSSTQNHNLNKFLS 502
Query: 319 KQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQAS 378
+++D + F + + L+ +++ LIE N IDD S
Sbjct: 503 SFFEKINDFINFKMFGSAIPVGLN-----------LKSFLIEEISN-IDD-----VELQS 545
Query: 379 EVFAAI----CRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRI 434
E+ A + C + IA +S +E+ + KK +K I+FV
Sbjct: 546 EILAMVHSLPCDEE-IADSISKLEIALQILDEKK-------------SDDLKAIIFVKTR 591
Query: 435 VTARALSYILQNLKF---LASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVAT 491
A+ + +L L+ + + + +VG + + MS ++ K +E+FRS + N++VAT
Sbjct: 592 DVAKKVYSLLDQLRMGDRFSFIKPNLVVG-HGSIGGMSISSQKKAIEEFRSDQCNVIVAT 650
Query: 492 KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFS 551
V EEG D+ C +VIR D P TV + IQSRGR R S + +V + RE D I F
Sbjct: 651 SVVEEGFDVPECNIVIRLDPPTTVTANIQSRGRLRNRDSYFYGIVKVDDPRE-DNIYEFF 709
Query: 552 KEEDRMNREIMD 563
K ++R E ++
Sbjct: 710 KNQERYLEEAIN 721
>gi|448346947|ref|ZP_21535826.1| Hef nuclease [Natrinema altunense JCM 12890]
gi|445631284|gb|ELY84516.1| Hef nuclease [Natrinema altunense JCM 12890]
Length = 819
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 204/488 (41%), Gaps = 65/488 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSVMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE Q V++ PQ++ L I
Sbjct: 80 QHADFYREALQLPDEEIVVFTGDVSPDDRAATWE----QATVVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 136 LADVTHLTFDECHRA--TGDYAYNYIAERYHAD--AKRPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D++ F V + D + + L E+
Sbjct: 188 EVCENL--GIDEVEVMTEEDA-DVDEFTHDTEVEWERI-----DLPDEVLEIRDALNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 240 KERLEKLKDLGVASSTQPDQSQKDLNRMRAELQTLINNDQSEGFEGMSIHAEVMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASDLSCIEVL 400
R + E +++ +L R+ AS+AS+ + R + + E
Sbjct: 296 --RQAVTLVETQSVE-ALRRYFERQRNQARTSGASKASQRMVSDPR---VREAMRNAERF 349
Query: 401 KE--PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
E P +SK + L T L+ + IVF TA AL+ L S+
Sbjct: 350 DEIHPKYSKARMLLA---ETLGLEGGERVIVFTESRDTAEALTDFLSE-----SFDAKRF 401
Query: 459 VGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VG G M++ + +L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 402 VGQGDREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 461
Query: 517 SFIQSRGR 524
IQ +GR
Sbjct: 462 RSIQRKGR 469
>gi|257052562|ref|YP_003130395.1| Hef nuclease [Halorhabdus utahensis DSM 12940]
gi|256691325|gb|ACV11662.1| helicase domain protein [Halorhabdus utahensis DSM 12940]
Length = 833
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 213/501 (42%), Gaps = 68/501 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ++L A ++ +V L TG GKT +++L+ E H + + LAPT LVQ
Sbjct: 24 RGYQIQLADAAAADHTLVCLPTGLGKTTVSLLVTAERLHAV----GGKSLLLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G + W D V++ PQ++ L I
Sbjct: 80 QHADFYREALTIDDEEIVVFTGEVRPDDRAALW----DDATVVIATPQVVENDLLGSRID 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A +PY I + +++ P + GM+ASP G +A L
Sbjct: 136 LSPVTHCTFDECHRA--SGEYPYTYIAERYHED--SDDPLVTGMSASP----GDDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPVINDTSSSYVTCSEQLA 293
N + + +V + EDA D+E++ + V RV PVI + +++
Sbjct: 188 GVCDNL--GIREVEVMTSEDA-DVEAYTHNTSVNWERVELPEPVIEIRDALQDVIHDRMT 244
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
++K S+ + + +++ ++ ++ ++N G + LL+
Sbjct: 245 QLKELGVTSSTQADV--------SEREIRKIQAKLRELMDNDQSEG--YQGMSLLAEVRK 294
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA-SDLSCIEVLK----------- 401
+R + AE +++ SL R+ + E R G + +D I K
Sbjct: 295 LRTAVTYAETQSVE-SLRRYLERLREA----ARSSGASKADQRLISAPKVREARRKAEDF 349
Query: 402 ---EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCHF 457
P F + ++ I T + + IVF TA L+ FL +
Sbjct: 350 EDLHPKFRRTRMQ---IAETLGIHDGERVIVFTESRDTAETLT------DFLGEHFSVEK 400
Query: 458 LVGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
VG + G M++ + LE FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 401 FVGQSDTDGSDGMTQTEQQETLEAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTA 460
Query: 516 ASFIQSRGRARMPQSEYAFLV 536
IQ +GR Q+E A +V
Sbjct: 461 IRSIQRKGRTGR-QTEGAVVV 480
>gi|363743602|ref|XP_003642879.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Gallus
gallus]
Length = 674
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 222/523 (42%), Gaps = 80/523 (15%)
Query: 62 YQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQLE A+ N IV+L TG GKT AV + HL + + + L V LVQQ
Sbjct: 6 YQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRR--HLEGRRGGRVAV-LVNKVHLVQQ 62
Query: 121 QAK----VIEESIGFKVRTFCGGSKRLKSH-CDWEKEIDQYEVLVMIPQILLYCLY---- 171
+ V+ ++ FKV G S SH C + + +V++ QIL L
Sbjct: 63 HLEKEFHVLRDA--FKVTAVSGDS----SHKCFFGQLAKGSDVVICTAQILQNALLSGEE 116
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGK 228
+++ +LL+ DECHH Q ++ Y KIM + + + +P+I G+TASP G
Sbjct: 117 EARVELTDFSLLVIDECHHTQKEA--VYNKIMLSYLQKKLSGQRDLPQILGLTASPGTGG 174
Query: 229 GASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
S + + + NL + S E A+ L+S V P + Y
Sbjct: 175 ETSFEGAVEHILQICANLDTEVIASAQEHAQHLQSHVPQP--------------TKQYDL 220
Query: 288 CSEQ------------LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL 335
C E+ +A+I+ + L + + + NR + +FC +
Sbjct: 221 CQEREQDPFGQRLKKIMAQIQEHMEMPELPQNFGTQVYEQRIVELENRAAE--RFCRKTR 278
Query: 336 GVCGALHASY---ILLSGDETMRNELIE------AEGNTIDDSLCRFASQASEVFAAICR 386
VC ALH LL D + + A+ D RF + E A +
Sbjct: 279 -VC-ALHLRRYNDALLINDTVRMMDAFQCLQQFYADKRDTKDPTERFLATTFEENRATLQ 336
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQ 445
+A D + + + +L +L IL F+ + IVF +A +L LQ
Sbjct: 337 --ALAGD--------QRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQ 386
Query: 446 NLKFLASWRCHFLVGVNAG----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
+ L V +G K M++N + ++ FR GELNLL +T V EEGLDI
Sbjct: 387 DTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFRYGELNLLFSTSVAEEGLDIP 446
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
C +V+R+ L + +Q++GRAR S Y+ L + N RE+
Sbjct: 447 ECNIVVRYGLMTNEIAMVQAQGRARAQNSMYSVLAKA-NSREV 488
>gi|339892124|gb|AEK21509.1| LGP2 [Gallus gallus]
Length = 674
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 222/523 (42%), Gaps = 80/523 (15%)
Query: 62 YQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQLE A+ N IV+L TG GKT AV + HL + + + L V LVQQ
Sbjct: 6 YQLEAVAPALRGRNSIVWLPTGAGKTRAAVHVCRR--HLEGRRGGRVAV-LVNKVHLVQQ 62
Query: 121 QAK----VIEESIGFKVRTFCGGSKRLKSH-CDWEKEIDQYEVLVMIPQILLYCLY---- 171
+ V+ ++ FKV G S SH C + + +V++ QIL L
Sbjct: 63 HLEKEFHVLRDA--FKVTAVSGDS----SHKCFFGQLAKGSDVVICTAQILQNALLSGEE 116
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGK 228
+++ +LL+ DECHH Q ++ Y KIM + + + +P+I G+TASP G
Sbjct: 117 EARVELTDFSLLVIDECHHTQKEA--VYNKIMLSYLQKKLSGQRDLPQILGLTASPGTGG 174
Query: 229 GASAQANLPKSINSLENLLDAKVYSV-EDAEDLESFVSSPVVRVYQYGPVINDTSSSYVT 287
S + + + NL + S E A+ L+S V P + Y
Sbjct: 175 ETSFEGAVEHILQICANLDTEVIASAQEHAQHLQSHVPQP--------------TKQYDL 220
Query: 288 CSEQ------------LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENL 335
C E+ +A+I+ + L + + + NR + +FC +
Sbjct: 221 CQEREQDPFGQRLKKIMAQIQEHMEMPELPQNFGTQVYEQRIVELENRAAE--RFCRKTR 278
Query: 336 GVCGALHASY---ILLSGDETMRNELIE------AEGNTIDDSLCRFASQASEVFAAICR 386
VC ALH LL D + + A+ D RF + E A +
Sbjct: 279 -VC-ALHLRRYNDALLINDTVRMMDAFQCLQQFYADKRDTKDPTERFLATTFEENRATLQ 336
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQ 445
+A D + + + +L +L IL F+ + IVF +A +L LQ
Sbjct: 337 --ALAGD--------QRYENPRLSKLEEILQEHFQPPGSSRGIVFTKTRQSAHSLLSWLQ 386
Query: 446 NLKFLASWRCHFLVGVNAG----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
+ L V +G K M++N + ++ FR GELNLL +T V EEGLDI
Sbjct: 387 DTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFRYGELNLLFSTSVAEEGLDIP 446
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
C +V+R+ L + +Q++GRAR S Y+ L + N RE+
Sbjct: 447 ECNIVVRYGLMTNEIAMVQAQGRARAQNSMYSVLAKA-NSREV 488
>gi|312284067|ref|NP_001186061.1| probable ATP-dependent RNA helicase DHX58 [Sus scrofa]
gi|229473596|gb|ACQ73327.1| LGP2 [Sus scrofa]
Length = 681
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 222/525 (42%), Gaps = 75/525 (14%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E NII++L TG GKT A Y + + + L V LV
Sbjct: 4 RPYQWEVIMPALEGRNIIIWLPTGAGKTRAAA---YVAKRHLETVDGAKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL----YH 172
Q + + + + T G + + +++L+ ++L L
Sbjct: 61 TQHCEEFSRMLDRRWAITTLSGD---MGPRAGFGHLARSHDLLICTAELLQKALTSEEEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ + +LL+ DECHH + Y I+ + K + +P++ G+TASP G+
Sbjct: 118 EHVELNVFSLLVVDECHHTH--KDTVYNIILSQYLKHKFQRTKPLPQVLGLTASPGTGRA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSPVVRVYQYGPVINDTSSSY--- 285
++ + + NL ++ S +++ L+ P QY +
Sbjct: 176 STLDGAIDHILQLCANLDTWRIMSPQNSRSQLQEHSRQPC---KQYDLCHQRAQDPFGAK 232
Query: 286 -------VTCSEQLAEIKR-------EQYISALSRKLHDH--QSLRNTTKQLNRLHDSMK 329
+ ++ E++R EQ + LS+ + Q R L R +D++
Sbjct: 233 LKKLMDKIHRHLEMPELRRDFGTQTYEQQVVELSQAAAEAGLQERRVYALHLRRYNDAL- 291
Query: 330 FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTI---DDSLCRFASQASEVFAAICR 386
+ + AL + + + ++++AE + DD A A+
Sbjct: 292 LIHDTVRAVDALATLRDFHTRERATKTQILQAERWLLALFDDHKNELARLAA-------- 343
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
DG + +EVLKE K+ F+ + + I+F +A +L LQ
Sbjct: 344 -DG--PENPKLEVLKE-ILQKQ----------FKGPKSPRGIIFTRTRQSAHSLLLWLQQ 389
Query: 447 LKFLAS--WRCHFLVGVNAGLKS-----MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
L + R L+G +S M++ + +++KFR+G LNLLVAT V EEGLD
Sbjct: 390 QPSLQTVDIRAQLLIGAGNSSQSTPMTQMTQRDQQEVIQKFRTGALNLLVATSVAEEGLD 449
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
I C +V+R+ L S +Q+RGRAR QS Y+F+ G+ REL
Sbjct: 450 IPQCNVVVRYGLLTNEISMVQARGRARASQSVYSFVAAQGS-REL 493
>gi|62734194|gb|AAX96303.1| Similar to probable ATP-dependent RNA helicase - fission yeast
(Schizosaccharomyces pombe) [Oryza sativa Japonica
Group]
gi|77548994|gb|ABA91791.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
Length = 1488
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 208/490 (42%), Gaps = 53/490 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ + +KA+ N +V L TG GKT IA +++Y P+ I +F APT LV
Sbjct: 249 REYQKKFVEKALFTNTLVALPTGLGKTFIAAVVMYNYFRWF--PEGKI-VFTAPTRPLVT 305
Query: 120 QQAKVIEESIGFKVR---TFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ + ++G G K C W+ + V + PQ+L +
Sbjct: 306 QQIEACHNTVGIPQEWTIDLKGNLSPSKRSCFWKSK----RVFFVTPQVLQNDIQSGICM 361
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVP-RIFGMTASPVVGKGASAQAN 235
+ + L+ DE H A N+ Y ++++ + +VP RI +TA+P S Q
Sbjct: 362 VNQLVCLVIDEAHRAS--RNYAYCVVVREL---EAARVPLRILALTATP-----GSKQPA 411
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ-------YGPVINDTSSSYVTC 288
+ IN+L + V+ E ++ ++ V + + PV ++
Sbjct: 412 IQNVINNLR--ISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGDEAEQ----V 465
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRN-TTKQLNRLHDSM------KFCLENLGVCGAL 341
+++L ++ R + S ++ DH+ N + QL L D L + G
Sbjct: 466 NDKLLDVIRPHLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQAPPPNIPLADKKEIGIS 525
Query: 342 HASYILLSGDETM-RNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE-V 399
+ LL G M + I+A +I+ A + + R + +E
Sbjct: 526 FQALTLLYGIMKMLLSYGIKAAHQSIE------AKYKEGSWKVLTRNNTFLEVKKTMENF 579
Query: 400 LKEPFFSKKLLRLIGI-LSTFRLQ-QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
L + S K+ L+ + L FR + + I+F + + + L+N+ F
Sbjct: 580 LSQGILSPKVRTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRNIDGELVRPAAF 639
Query: 458 LVGVNAG--LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ + G LK ++ ++IL KFRSGE N+LVAT +GEEGLDI LV+ FD +
Sbjct: 640 IGQSSTGDQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVDLVVCFDANISA 699
Query: 516 ASFIQSRGRA 525
IQ GR
Sbjct: 700 LRMIQRMGRT 709
>gi|448417002|ref|ZP_21579105.1| Hef nuclease [Halosarcina pallida JCM 14848]
gi|445678685|gb|ELZ31173.1| Hef nuclease [Halosarcina pallida JCM 14848]
Length = 838
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 207/495 (41%), Gaps = 68/495 (13%)
Query: 55 PKQIARK-YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
P I R+ YQ+ L A + + +V L TG GKT +++L+ E H I +FLAP
Sbjct: 17 PSFIERRLYQIRLAGAARDADTLVCLPTGLGKTTVSLLVTAERLHEI----GGKALFLAP 72
Query: 114 TVALVQQQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
T LVQQ A E++ ++ F G + WE +++ PQ++ L
Sbjct: 73 TKPLVQQHADFYREALTIPDDEIVVFTGDVRPDDRAALWE----DARIVIATPQVVENDL 128
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGA 230
I + + L FDECH ++ Y I + ++ + P + GM+ASP G
Sbjct: 129 IGNRISLRDVTHLTFDECHRG--TGDYAYVYIAERYHAD--AEHPLVTGMSASP----GG 180
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN----DTSSSYV 286
++ L N L + +V + EDA+ V Y Y + D +
Sbjct: 181 DEESILEVCENL--GLSEVEVMTEEDAD----------VDEYTYDTEVEWERIDLPDEIL 228
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALH 342
+ L ++ +++ S + + S + KQLN + ++ + N G + H
Sbjct: 229 AIRDALNDVIKDRLEKLKSLGVTNTTSPDVSQKQLNGMRAELQKLINNDKSEGYKGMSTH 288
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRF---------ASQASEVFAAICRRDGIASD 393
A + L EL+E + +S+ R+ +S AS+ + +
Sbjct: 289 AEVMKLR----RAVELVETQSV---ESVRRYFERQRNAARSSGASKASQRLVSEPKVREA 341
Query: 394 LSCIEVLKE--PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
+ E E P FS+ + L T ++ + IVF TA AL+ L A
Sbjct: 342 MRKAESFDELHPKFSRTRILLA---QTLGIEGGQRVIVFTESRDTAEALTDFLS-----A 393
Query: 452 SWRCHFLVGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
S+ VG G M++ + L +FR+GE +LV+T V EEGLD+ LV+ F
Sbjct: 394 SFDVRRFVGQGDKDGSDGMTQKEQQETLNEFRNGEFEVLVSTSVAEEGLDVPEVDLVLFF 453
Query: 510 DLPETVASFIQSRGR 524
+ T IQ +GR
Sbjct: 454 EPVPTAIRSIQRKGR 468
>gi|335438600|ref|ZP_08561337.1| Hef nuclease [Halorhabdus tiamatea SARL4B]
gi|334891007|gb|EGM29264.1| Hef nuclease [Halorhabdus tiamatea SARL4B]
Length = 834
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 213/504 (42%), Gaps = 74/504 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ +L A ++ +V L TG GKT +++L+ E H + + LAPT LVQ
Sbjct: 24 RSYQTKLADAAAADHTLVCLPTGLGKTAVSLLVTAERLHEV----GGKSLLLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G + WE V+V PQ++ L I
Sbjct: 80 QHADFYREALTIDDEEIVVFTGEVRPDDRAELWESAT----VVVATPQVVENDLLGSRID 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A +PY I + +++ + P + GM+ASP G +A L
Sbjct: 136 LSPVTHCTFDECHRA--SGEYPYTYIAERYHEESVD--PLVTGMSASP----GDDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPVINDTSSSYVTCSEQLA 293
N + + +V + EDA D+E++ + V RV PV+ + +++
Sbjct: 188 QVCDNL--GIREVEVMTSEDA-DVEAYTHNTSVNWERVELPEPVVEIRDALQDVIHDRMT 244
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
++K S+ + + +++ ++ ++ ++N G + LL+
Sbjct: 245 QLKELGVTSSTQADVSE--------REIRKIQAKLRELMDNDQSEG--YQGMSLLAEVRK 294
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA-SDLSCIEVLK----------- 401
+R + AE +++ SL R+ + E R G + +D I K
Sbjct: 295 LRTAVTYAETQSVE-SLRRYLERLREA----ARSSGASKADQRLISAPKVREARRKAEDF 349
Query: 402 ---EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
P F + ++ I T + + IVF TA L+ FLA HF
Sbjct: 350 DDLHPKFRRTRMQ---IAETLGIHDGERVIVFTESRDTAETLT------DFLAE---HFT 397
Query: 459 V------GVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLP 512
V G M++ + LE FR+GE +LV+T V EEGLD+ LV+ ++
Sbjct: 398 VEKFVGQSDTDGSDGMTQTEQQETLEAFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPV 457
Query: 513 ETVASFIQSRGRARMPQSEYAFLV 536
T IQ +GR Q+E A +V
Sbjct: 458 PTAIRSIQRKGRTGR-QTEGAVVV 480
>gi|284166979|ref|YP_003405258.1| ERCC4 domain-containing protein [Haloterrigena turkmenica DSM 5511]
gi|284016634|gb|ADB62585.1| ERCC4 domain protein [Haloterrigena turkmenica DSM 5511]
Length = 820
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 202/486 (41%), Gaps = 61/486 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A ++ +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANDHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPDDRAAMWEEAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ + P + GM+ASP G +A L
Sbjct: 136 LADVTHITFDECHRA--TGDYAYNYIAERYHAD--ARDPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D++ F V + D + + L E+
Sbjct: 188 EVCENL--GLREVEVMTEEDA-DVDEFTHDTDVEWERI-----DLPEEVIEIRDALNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 240 KERLEKLKELGVASSTQPDQSQKDLNRMRAELQKLINNDQSEGFEGMSVHAEIMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASDLSCIEVL 400
R + E +++ ++CR+ AS+AS+ + R + L
Sbjct: 296 --RQAVTLVETQSVE-AVCRYFDRQRNQARSSGASKASQRLVSDPRVREAMRKAESFDQL 352
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
+ ++L + T L+ + IVF TA AL+ L S+ VG
Sbjct: 353 HPKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTDFLSE-----SFDAKRFVG 403
Query: 461 VN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
G M++ + +L++FR GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 404 QGDREGSDGMTQTEQQEVLDQFRGGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRS 463
Query: 519 IQSRGR 524
IQ +GR
Sbjct: 464 IQRKGR 469
>gi|358348326|ref|XP_003638198.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
gi|355504133|gb|AES85336.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
Length = 472
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
+A +E ++G+ F ++ LL +A H S+ Y+RLEF+GDAVL + I+++L+ VY +
Sbjct: 114 VAAVEKIIGYTFRNKNLLEEALTHSSYPE-SVSYERLEFIGDAVLGHAISNHLFLVYTNV 172
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
QL+ LRS V+ + A AV ++++ ++ L+E I + + V
Sbjct: 173 DQRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGRAIVLY 232
Query: 1332 GP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL--NPIRELL 1387
G + PKVL D+VES A+ +D F+L +W ++ L+PI+ ++L+ P+ L
Sbjct: 233 GGAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVTMLY 292
Query: 1388 ELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACA--TNLSRKEAIRIASQQL 1443
E+C+ + + G K A V G ++F A + ++++ +A + A Q+L
Sbjct: 293 EICHKNGKKVDIRHSRNGDKSTASVYVDG---ELFAVASSDQKDIAKLDAAKSAVQKL 347
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +ALT E S ERLE +GDA L +A+ HLFL++ VD+ +L+ RS V+
Sbjct: 130 LLEEALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEK 189
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDG--RAPDDLNAE 1140
L + A N L YIR + + R +E R I Y G +AP
Sbjct: 190 LARAAVSNCLHRYIRLKTHSLAEHI---REFAAAVEQEKGRAI-VLYGGAVKAP------ 239
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGF 1172
K +ADVVE++ A D F
Sbjct: 240 ------------KVLADVVESVAAAVYVDLDF 259
>gi|448460272|ref|ZP_21597097.1| Hef nuclease [Halorubrum lipolyticum DSM 21995]
gi|445807013|gb|EMA57099.1| Hef nuclease [Halorubrum lipolyticum DSM 21995]
Length = 827
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 215/499 (43%), Gaps = 87/499 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K WE +++ PQ++ L I
Sbjct: 77 QHADFYREALSVPDDEIVVFTGDVKPDDRAALWE----DARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHCTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENLLDAKVYSVEDAE-DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
+ I ++ ENL + V + +A+ D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLSNVEVMTEADADVDEYTHDTDVQWEQ------------VTLPDEVLA 227
Query: 295 IKREQYISALSRKLHDHQSLRNTTK--------QLNRLHDSMKFCLENLGVCG----ALH 342
I R+ ++ +L +SL T K LN + +K ++N G + H
Sbjct: 228 I-RDALNEVITDRLEKLKSLGVTNKTSPDLSQRDLNEMRGKLKKMMDNDQSDGYKGMSTH 286
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLSC 396
A + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 287 AEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPKV 336
Query: 397 IEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
E +++ P FSK + L T + + + I+F TA AL ++
Sbjct: 337 REAMRKAESFDGLHPKFSKARILLA---ETLGINEGERAILFTESRDTAEAL------VE 387
Query: 449 FL-ASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
FL AS+ VG G MS+ + L++F++GE +LV+T V EEGLD+ L
Sbjct: 388 FLSASFDVRKFVGQGDKEGSDGMSQKQQQETLDEFKAGEFEVLVSTSVAEEGLDVPEVDL 447
Query: 506 VIRFDLPETVASFIQSRGR 524
V ++ T IQ +GR
Sbjct: 448 VCFYEPVPTAIRSIQRKGR 466
>gi|339261112|ref|XP_003368069.1| conserved hypothetical protein [Trichinella spiralis]
gi|316963063|gb|EFV48890.1| conserved hypothetical protein [Trichinella spiralis]
Length = 654
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 47/265 (17%)
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L+ FR G+LNLL AT + EEG+D++ C VIRFD P T SF+QS+GRAR + Y L
Sbjct: 167 VLKNFRHGKLNLLAATSILEEGIDVRHCNYVIRFDTPLTFRSFVQSKGRARQKIAYYTIL 226
Query: 536 VDSG---------------------NQRELDLI-------KNFSKEEDRMN--REIMDRT 565
V N R+L+++ +++S D+++ R+ ++
Sbjct: 227 VQDRFLKSFQEMLNSFVETEKFLKVNGRDLNILTRTKDRDRSYSGNNDQVDNCRKEVNLP 286
Query: 566 SSDAFTCSEERIYKVDSSG-----ACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
+ D + E + +G AC+ +++ RYC+KL D F + PKF
Sbjct: 287 NGDVDSLVEPYYTYFEENGLVKKAACLVLSSAHNVIKRYCNKLRKDRFADSSPKFSVQTI 346
Query: 621 LG-----GTICHIILPANAPI-HQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
L + + LP +P+ +I G P + + A+ A + + LH +G LN++L+P
Sbjct: 347 LNKDLSISYVATVQLPTTSPLKKKIEGKPMQNAKLAEMAAAFETAKMLHAMGELNEFLIP 406
Query: 675 -----QEDNATEDEPMLFSSDSDSY 694
+E EDE FS S SY
Sbjct: 407 PVTVRKEIELKEDE-QFFSISSRSY 430
>gi|448475812|ref|ZP_21603167.1| Hef nuclease [Halorubrum aidingense JCM 13560]
gi|445816030|gb|EMA65939.1| Hef nuclease [Halorubrum aidingense JCM 13560]
Length = 825
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 214/500 (42%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +++ +V L TG GKT +++L+ E H +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADDHTLVCLPTGLGKTTVSLLVTAERLH----EAGGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W D +++ PQ++ L I
Sbjct: 77 QHADFYREALSIPADEIVVFTGDVKPDDRAAVW----DDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHLTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL + +V + DA D++ + VR Q VT +++
Sbjct: 180 TEEIQTVCENLGLRNVEVMTEADA-DVDEYTHDTDVRWEQ------------VTLPDEVI 226
Query: 294 EIKREQYISALSRKLHDHQSLRNTTK--------QLNRLHDSMKFCLENLGVCG----AL 341
I R+ ++ +L +SL T K LN + +K ++N G +
Sbjct: 227 VI-RDALNEVITDRLEKLKSLGVTNKTSPDLSQRDLNEMRGKLKKMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + I+F TA AL +
Sbjct: 336 VREAMRKAESFDGLHPKFSKARILLA---ETLGINDGERAILFTESRDTAEAL------V 386
Query: 448 KFLA-SWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL+ S+ VG G MS+ + L++F++G +LV+T V EEGLD+
Sbjct: 387 EFLSTSFAVRKFVGQGDKEGSDGMSQKQQQETLDEFKAGAFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|452206230|ref|YP_007486352.1| ATP-dependent RNA helicase/nuclease Hef [Natronomonas moolapensis
8.8.11]
gi|452082330|emb|CCQ35585.1| ATP-dependent RNA helicase/nuclease Hef [Natronomonas moolapensis
8.8.11]
Length = 835
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 215/528 (40%), Gaps = 71/528 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYE-LAHLIRKPQKSICIFLAPTVALV 118
R YQL L + A ++ +V L TG GKT +++L+ E LA + LAPT LV
Sbjct: 24 RNYQLSLAETAASDHTLVCLPTGLGKTAVSLLVTAERLAE-----HGGTSLLLAPTKPLV 78
Query: 119 QQQAKVIEESIGFK---VRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ A E++ + F G + WE V+ PQ++ L I
Sbjct: 79 QQHAAFYREALSVDDDDIVVFTGAVRPDDRAALWES----TRVVCATPQVIENDLVGNRI 134
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ + L DECH A N+ Y I D Y D + P + GM+ASP G +
Sbjct: 135 SLSDVTHLTVDECHRA--TGNYAYNYIA-DRYHAD-AETPLVTGMSASP----GGDKEEI 186
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
L N L D V + +DA+ V + + D + + + EI
Sbjct: 187 LTVCDNL--GLCDVAVMTEDDAD----------VAAHTHD---TDVEWERIELPDTVIEI 231
Query: 296 KREQYISALSRKLHDHQSL--RNTTK------QLNRLHDSMKFCLENLGVCG----ALHA 343
R+ +S +LH + L N+T QLN + ++ + N G + HA
Sbjct: 232 -RDALNDVISERLHKLKGLGVTNSTDPSMSQSQLNAIRAKLQELINNDSSEGYKGMSAHA 290
Query: 344 SYILLSGDETMRNELIEAEG---------NTIDDSLCRFASQASEVFAAICRRDGIASDL 394
+ L EL+E + +D+ AS+AS+ F + R
Sbjct: 291 EIMKLR----RAVELVETQSVESLRRYFERQREDAKSSGASKASQRFVSDPRVKEAMRRA 346
Query: 395 SCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR 454
+ L F ++L + T ++ + IVF TA L+ L F S R
Sbjct: 347 EAFDDLHPKFRRARIL----LAQTLGIEDGERVIVFTESRDTAETLTAFLGE-HF--STR 399
Query: 455 CHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD-LPE 513
G G M++ K L+ FR+GE +LV+T V EEGLD+ LV+ ++ +P+
Sbjct: 400 RFVGQGDKEGSDGMTQTEQKDTLDAFRNGEFEVLVSTSVAEEGLDVPDVDLVLFYEPVPK 459
Query: 514 TVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
+ S IQ +GR ++ + + R+ EE RM +E+
Sbjct: 460 GIRS-IQRKGRTGRASDGRVVVLLAEDTRDEAFFWISRNEEKRMEKEL 506
>gi|255572781|ref|XP_002527323.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223533323|gb|EEF35075.1| double-stranded RNA binding protein, putative [Ricinus communis]
Length = 219
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 1517 LQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKII-ECIGEP 1575
L+ SA+S+L+E+C AN WKPP ++CCKEEG H +LFTF+VIVE+ E I+ EC G P
Sbjct: 125 LKRVSAKSQLHEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEMIGAEYIVLECYGIP 184
Query: 1576 QAKKKGAAEHAAEGMLWCLEREGYL 1600
+ KKK AAEHAAEG LW L+ GY
Sbjct: 185 KIKKKTAAEHAAEGALWYLKHLGYF 209
>gi|16082461|ref|NP_394951.1| RNA helicase (RIG-I) [Thermoplasma acidophilum DSM 1728]
gi|10640841|emb|CAC12619.1| RNA helicase (RIG-I) related protein [Thermoplasma acidophilum]
Length = 508
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 232/525 (44%), Gaps = 66/525 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL + K ++ +N ++ + TG GKT IA + I + +K + +APT LV
Sbjct: 6 REYQLNVFKNSIGQNTLIVMPTGLGKTIIAAMFIEKFYG-----EKKRSLMVAPTKPLVL 60
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ I +S G ++ F G + W + ++ V PQ++ + +
Sbjct: 61 QHARTIADSTGISENEIGVFTGEIDAEERELIWVTK----KIFVSTPQVVFNDMRSGILD 116
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ L+IFDE H A N+ Y I +++ K K I G+TASP G+S +
Sbjct: 117 ITKFDLIIFDEAHRAV--GNYAYVDIAQEYLK---YKKKLIIGLTASP----GSSRE--- 164
Query: 237 PKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVRVYQY------GPVINDTSSSYVTCS 289
K + NL +KV + E ED+ +V + V++ + ++N + S
Sbjct: 165 -KIDEIMANLGISKVIAKTEMDEDVRKYVKTIDVKLIKIREPDGTKEIVNMIDA---VMS 220
Query: 290 EQLAEIKREQYISALSRK--LHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
+ L +K + SRK + Q + N+ K+ L ++ + A+ Y+
Sbjct: 221 KLLEPVKSSNFSIGRSRKDLVATMQKVINSAKEDRSLFQLVR------RITAAIRLDYL- 273
Query: 348 LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK------ 401
E IE +G ID +L I R + S L L+
Sbjct: 274 --------KEYIETQG--IDVALHYLEEMEKSQDPGIRRAISMLSSLDEFATLRTKLMLA 323
Query: 402 -EPFFSKKLLRLIGILSTFRLQQHMKCIVFVN-RIVTARALSYILQNLKFLASWRCHFLV 459
+ + + K+ + + I+ + + + + IVF + RI + + YI +N L R F+
Sbjct: 324 ADGYTNPKMEKTLSIMES-NVHGNARAIVFTHYRITSDLLMDYIQKNGTSLKPVR--FIG 380
Query: 460 GVNAGL-KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+ G + +S++ K I+E F++ N+L+AT + EEGLDI VI ++ + +
Sbjct: 381 QADRGSDEGLSQDQQKKIIEDFKNNVYNVLIATSIAEEGLDIPDTDFVIFYEAVPSEIRY 440
Query: 519 IQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMD 563
IQ +GR ++ +++ N R++ + ++ RM + I D
Sbjct: 441 IQRKGRTGRSRNGQVYILVFENSRDMAYYYSSIRKVSRMTQTIED 485
>gi|300709179|ref|XP_002996756.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
gi|239606080|gb|EEQ83085.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
Length = 1131
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 203/504 (40%), Gaps = 100/504 (19%)
Query: 907 KDSDSS----SHVDHLISSYGIHLKHP---KQPLLRAKPLFRLRNLLHNRKLEDSESHEL 959
K+ DSS + +++ I YGI+L + K + A P SH+
Sbjct: 676 KNLDSSKKEYTFLEYFIFLYGINLSNSGKNKNVIFTAVPF----------------SHKK 719
Query: 960 EEYFDDLPPELCQLKIIGFS---KDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
E+ PE +II + K I S + E L + E K ++ S
Sbjct: 720 EK-----EPEFHACEIIYVTVVKKSIKSDYKRFVEYFNIFEILALTYEFKVNMNFSISHS 774
Query: 1017 AEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSN 1076
+ L +L + Q ER E +GD+ LKY+V + LF + +L + +
Sbjct: 775 NLAISFTLQDSLNGQ--QNDLGYERFEFIGDSVLKYSVSKFLFT-ECGYNLNKLVSTKDS 831
Query: 1077 AVNNSNLLKLAARNNLQVY---------------IRDQPFDPCQFFALGRRCPRICSKET 1121
V N +L ++ + NLQ Y I D FD +L + +
Sbjct: 832 LVCNDHLYRVGRQINLQKYFSLNRYTEHLFQPPAILDLEFDKSLIESLNLK--NLFQNNN 889
Query: 1122 ERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKW 1181
+ Y + D N E KG KK AD+VE+L+G + GF+ A F+K
Sbjct: 890 QYNFVKLYSRKQSQDTNLE----KG-----KKVYADIVESLIGVHYIEQGFQKAWNFIKS 940
Query: 1182 IGIQVEFEASQVTNICISS----------KSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
IGI + + +N ++ + LPL+ ++ +E ++ + F ++G + +
Sbjct: 941 IGILENHGSKRHSNNFMTKTPNIILLCEYEGILPLA---NILKVEKIINYTFKNKGYIEK 997
Query: 1232 AFVHPSF--NRLGG-CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQA 1288
A +HPS+ N G +Q+LE +GD LD ++ Y++ Y P L R LVNN
Sbjct: 998 AMIHPSYKDNIFGSERFQKLELVGDCFLDLKVSDYIFFKYTDADPETLHTHRKSLVNNHT 1057
Query: 1289 FANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLG 1348
FA + Y F + TR+ + K GD+ E+ G
Sbjct: 1058 FAMILFKSGLYDF----------------SFTGLSDQTRDFNNN-KVSKCYGDIFEALAG 1100
Query: 1349 AILLDSGFN-------LNTVWKIM 1365
A++LDS F+ TV K+M
Sbjct: 1101 AVILDSEFDFEMTDMFFKTVLKLM 1124
>gi|448302430|ref|ZP_21492412.1| Hef nuclease [Natronorubrum tibetense GA33]
gi|445581659|gb|ELY36011.1| Hef nuclease [Natronorubrum tibetense GA33]
Length = 818
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 205/493 (41%), Gaps = 75/493 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 26 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVTARRLDEV----GGKALMLAPTKPLVQ 81
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE Q V++ PQ++ L I
Sbjct: 82 QHADFYREALQVPDDEIVVFTGDVSPDDRAETWE----QATVVMATPQVIENDLVGSRIS 137
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A + Y + + Y D + P + GM+ASP G +A L
Sbjct: 138 LSDVTHLTFDECHRATGDYAYNY---IAERYHADASQ-PLVTGMSASP----GGDEEAIL 189
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + D +V + EDA D+ F D + E++ EI+
Sbjct: 190 EVCANL--GIQDVEVMTEEDA-DVSEFTHD------------TDVEWERIDLPEEVIEIR 234
Query: 297 R--EQYISALSRKLHDHQSLRNTT-----KQLNRLHDSMKFCLENLGVCG----ALHASY 345
+ I+ KL + ++T K LNR+ ++ + N G ++HA
Sbjct: 235 DALNEVITDRLEKLKELGVAKSTQPDQSQKDLNRMRAELQQLINNDQSEGFKGMSVHAEV 294
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASD 393
+ L R + E +++ ++CR+ AS+AS+ + R
Sbjct: 295 MKL------RQAVTLVETQSVE-AVCRYFDRQRNQARSSGASKASQRMVSDPRVREAMRK 347
Query: 394 LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW 453
+ L + ++L + T L+ + IVF TA AL+ L + S+
Sbjct: 348 AESFDQLHPKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTEFLND-----SF 398
Query: 454 RCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
VG G M++N + +L++FR+ E +LV+T V EEGLD+ LV+ ++
Sbjct: 399 DAKRFVGQGDREGSDGMTQNQQQEVLDQFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEP 458
Query: 512 PETVASFIQSRGR 524
T IQ +GR
Sbjct: 459 VPTAIRSIQRKGR 471
>gi|443723522|gb|ELU11899.1| hypothetical protein CAPTEDRAFT_221268 [Capitella teleta]
Length = 740
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 243/543 (44%), Gaps = 89/543 (16%)
Query: 60 RKYQLELCKKAME---ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVA 116
R YQ+EL + +E N ++ T GKT +A ++ H + P S +FL P
Sbjct: 73 RLYQIELVDRILELKGANAVIVAPTNSGKTLVAADILKN--HFDKVP-GSKAVFLVPNGL 129
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQY----EVLVMIPQILLYCLYH 172
L QQQ E++G + +K L+ ++I+ ++LVM PQIL+
Sbjct: 130 LAQQQG----EALGKYLPK--ANTKVLRGEACTSEQINDLLQTTDILVMTPQILINAYDD 183
Query: 173 RFIKMEL---IALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIM-KVPRIFGMTAS 223
F + + I+L++ DECHH K+ PY+++M+ F+ +P+ + K+P++ G+TAS
Sbjct: 184 AFDQDKPSFPISLIVLDECHHCVKKA--PYSQLMEIFHLHLPGRPEPLPKLPQVIGLTAS 241
Query: 224 PVV--GKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRV-------YQY 274
+ K +A+ N+ K + + +DA++ VE +D +F +P + +Q
Sbjct: 242 VRISTSKTDTAECNIFKLLAN----MDARLVMVEKNKDELAFYCAPPEEILVEYKDRFQI 297
Query: 275 GPVINDTSSSYVTCSEQLAEIKREQYISALSRKL----------HDHQSLRNTTKQLNRL 324
VI ++ A++ Q++ +S KL HD L + + L+
Sbjct: 298 DVVIKP--------RKKKADLAYVQWLRNISTKLISLIEDAECKHD---LVSCVEYLDMY 346
Query: 325 HDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC-RFASQASEVFAA 383
++S+ E C + A L +T+ + E+ + D L ++ + +
Sbjct: 347 NNSLMLNYE----CRSTDAYNYLKERAKTLMYK--ESRPESTDAWLADKYKGKIGTIEHY 400
Query: 384 ICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYI 443
+C D + S + VLKE I+ T + M+CI+F AL
Sbjct: 401 LCSSD----ENSWLAVLKE-----------HIMKTKKPGAPMRCIIFCRTREICSALVDW 445
Query: 444 LQNLKFLASWRCHFLVGVNAGL--KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQ 501
+ + L F+ G NA K ++ I ++F G +L AT V +EG+D++
Sbjct: 446 ANDSEELCDLNPGFITGSNASTSSKGLTNQQQNEIKQEFLDGRRQILFATSVAQEGVDVK 505
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
C VI ++ + + IQ+RGRAR + Y L + QR D K SK+ + E+
Sbjct: 506 KCDNVICYNFTSDMVARIQTRGRARKSGATYTVL--ATKQRLKDEEK--SKQNEIKQNEV 561
Query: 562 MDR 564
+ +
Sbjct: 562 LQK 564
>gi|448726759|ref|ZP_21709151.1| Hef nuclease [Halococcus morrhuae DSM 1307]
gi|445793805|gb|EMA44376.1| Hef nuclease [Halococcus morrhuae DSM 1307]
Length = 806
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 218/500 (43%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ EL +A + +V L TG GKT +++L+ H Q + LAPT LV
Sbjct: 22 RRYQAELADQAASGHTLVCLPTGLGKTTVSLLVTAARLH----EQGGTSLLLAPTKPLVT 77
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ +++ ++ F G S D E+ ++ +++ PQ++ L I
Sbjct: 78 QHAEFYRDALTIPDDEIVVFTGEV----SPDDREELFERARIVIATPQVVENDLIGGRID 133
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ L FDECH A N+ Y I + Y D K P + GM+ASP G +A
Sbjct: 134 LATTTHLTFDECHRA--SGNYAYNYIAE-RYHADAEK-PLVTGMSASP----GGDEEA-- 183
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY--VTCSEQLAE 294
+S+ L V + EDA+ V Y +DTS + VT +++
Sbjct: 184 IQSVCENLGLASVAVMTEEDAD------------VADY---THDTSVEWERVTLPDEILA 228
Query: 295 IKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----ALH 342
I R+ ++ + +L + L +TT + LNR+ ++ ++N G ++H
Sbjct: 229 I-RDSLVAVIEERLEKLKELGVSHTTSADISQRDLNRIRSELQQLIDNDQSEGYEGMSIH 287
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLSC 396
A + L R + AE +++ SL R+ A+++S A R + S+
Sbjct: 288 AEVMKL------RRAVTLAETQSVE-SLRRYFERQRNAARSSGASKASQR---LVSEAKV 337
Query: 397 IEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL---- 444
E +++ P F + + L L ++ + IVF TA L+ L
Sbjct: 338 REAMEQAETYDDLHPKFRRARILLAQCLG---IEGGERVIVFTESRDTAETLTEFLGAHF 394
Query: 445 QNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ KF+ G G M++N + L+ FR+GE +LV+T V EEGLD+
Sbjct: 395 ETRKFVGQ-------GDKEGSDGMTQNEQQETLDAFRAGEFEVLVSTSVAEEGLDVPEVD 447
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV+ ++ T IQ +GR
Sbjct: 448 LVLFYEPVPTAIRSIQRKGR 467
>gi|222480951|ref|YP_002567188.1| Hef nuclease [Halorubrum lacusprofundi ATCC 49239]
gi|222453853|gb|ACM58118.1| ERCC4 domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 836
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 217/500 (43%), Gaps = 89/500 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L A +E+ +V L TG GKT +++L+ E H + +FLAPT LVQ
Sbjct: 21 RRYQLQLADAAADEHTLVCLPTGLGKTTVSLLVTAERLHEV----GGKALFLAPTKPLVQ 76
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G K W + +++ PQ++ L I
Sbjct: 77 QHADFYREALSIPDDEIVVFTGDVKPDDRAALW----NDARIVIATPQVVENDLVGNRIS 132
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ P + GM+ASP
Sbjct: 133 LRDVTHCTFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP---------GGD 179
Query: 237 PKSINSL-ENL--LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA 293
+ I ++ ENL + +V + EDA D++ + V+ Q VT +++
Sbjct: 180 TEEIETVCENLGLSNVEVMTEEDA-DVDEYTHDTDVQWEQ------------VTLPDEVI 226
Query: 294 EIKREQYISALSRKLHDHQSLRNTTK--------QLNRLHDSMKFCLENLGVCG----AL 341
I R+ ++ +L +SL T K LN + +K ++N G +
Sbjct: 227 AI-RDALNEVITDRLEKLKSLGVTNKTSPDLSQRDLNEMRGKLKKMMDNDQSDGYKGMST 285
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLS 395
HA + L EL+E + +S+ R+ A+++S A R + +D
Sbjct: 286 HAEVMKLR----RATELVETQSV---ESVRRYFERQREAARSSGASKASQR---MVADPK 335
Query: 396 CIEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNL 447
E +++ P FSK + L T + + + I+F TA AL +
Sbjct: 336 VREAMRKAEAFDGLHPKFSKARILLA---ETLGINEGERAILFTESRDTAEAL------V 386
Query: 448 KFLA-SWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+FL+ S+ VG G MS+ + L++F++G+ +LV+T V EEGLD+
Sbjct: 387 EFLSTSFDVRKFVGQGDKEGSDGMSQKQQQETLDEFKAGDFEVLVSTSVAEEGLDVPEVD 446
Query: 505 LVIRFDLPETVASFIQSRGR 524
LV ++ T IQ +GR
Sbjct: 447 LVCFYEPVPTAIRSIQRKGR 466
>gi|448389152|ref|ZP_21565564.1| Hef nuclease [Haloterrigena salina JCM 13891]
gi|445669056|gb|ELZ21671.1| Hef nuclease [Haloterrigena salina JCM 13891]
Length = 820
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 201/486 (41%), Gaps = 61/486 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDGEIVVFTGDVSPDDRAAMWEEAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ + P + GM+ASP G +A L
Sbjct: 136 LSDVTHITFDECHRA--TGDYAYNYIAERYHAD--AQDPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D++ F V + D + + L E+
Sbjct: 188 EVCENL--GLREVEVMTEEDA-DVDEFTHDTDVEWERI-----DLPEEVIEIRDGLNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 240 KERLEKLKELGVASSTQPDQSQKDLNRMRAELQKLINNDQSEGFEGMSIHAEIMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASDLSCIEVL 400
R + E +++ ++CR+ AS+AS+ + R + L
Sbjct: 296 --RQAVTLVETQSVE-AVCRYFDRQRNQARSSGASKASQRLVSDPRVREAMRKAESFDQL 352
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
+ ++L + T L+ + IVF TA AL+ L S+ VG
Sbjct: 353 HPKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTDFLSE-----SFDAKRFVG 403
Query: 461 VN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
G M++ + +L++FR GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 404 QGDREGSDGMTQKEQQDVLDQFRGGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRS 463
Query: 519 IQSRGR 524
IQ +GR
Sbjct: 464 IQRKGR 469
>gi|291406113|ref|XP_002719437.1| PREDICTED: DEXH (Asp-Glu-X-His) box polypeptide 58-like
[Oryctolagus cuniculus]
Length = 678
Score = 104 bits (259), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 226/534 (42%), Gaps = 96/534 (17%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A + HL P + + L V LV
Sbjct: 4 RPYQWEVIVPALEGKNIIIWLPTGTGKTRAAAYVAKR--HLETVPGAKVVV-LVNRVHLV 60
Query: 119 QQQAKVIEESI-GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----HR 173
Q ++ + G T G + + +++L+ ++L L
Sbjct: 61 TQHSEEFGRMLDGHWTMTTLRGD--MGPRAGFGHLARGHDLLICTAELLQMALTSTEEEE 118
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGA 230
+++ LL+ DECHH + Y I+ + + + + +P++ G+TASP G +
Sbjct: 119 HVELTAFTLLVVDECHHTH--KDTVYNVILSRYLELKVHRTQPLPQVLGLTASPGTGGAS 176
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ---------YGPVIN-- 279
+ + NL ++ S E ++ + Y +G ++
Sbjct: 177 KLDGAIDHILQLCANLDTWRIMSPERYRSQLLQLNQKRCKQYDLCHRRSQDPFGDLVRKI 236
Query: 280 -DTSSSYV------------TCSEQLAEIKR--------EQYISALS-RKLHDHQSLRNT 317
D ++ T +Q+ E+ + EQ + AL R+ +D + +T
Sbjct: 237 MDQIHDHMEMEELSRDFGTQTYEQQVVELSQAAAKAGLQEQRVHALHLRRYNDALLIHDT 296
Query: 318 TKQLNRLHDSMK--FCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFAS 375
+ ++ L D+++ + E LHA LL+ L + NT L R A+
Sbjct: 297 VRAVDAL-DTLQDFYDRERTTKARILHAERWLLA--------LFDEHKNT----LARLAT 343
Query: 376 QASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIVFVNRI 434
Q+ E + KL L IL T FR + I+F
Sbjct: 344 QSPE--------------------------NPKLEMLENILRTQFRSPDSPRGIIFTRTR 377
Query: 435 VTARALSYILQNLKFLAS--WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVA 490
+AR+L +Q L + R L+G + +S M++ + ++ +FR+G LNLLVA
Sbjct: 378 QSARSLLLWVQQQPGLQTVDIRPQMLIGAGSSSQSTHMTQRDQEEVIRRFRAGMLNLLVA 437
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
T V EEG+DI C +V+R+ L S +Q+RGRAR QS Y+F+ G+ REL
Sbjct: 438 TSVVEEGMDIPHCNVVVRYGLLTNEISMVQARGRARADQSVYSFVATEGS-REL 490
>gi|448312646|ref|ZP_21502386.1| Hef nuclease [Natronolimnobius innermongolicus JCM 12255]
gi|445600842|gb|ELY54842.1| Hef nuclease [Natronolimnobius innermongolicus JCM 12255]
Length = 820
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 200/487 (41%), Gaps = 63/487 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A ++ +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANDHTLVCLPTGLGKTTVSLLVTARRLEEV----GGTSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPDDRAAMWEDAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A + Y + + Y PD + P + GM+ASP G +A L
Sbjct: 136 LSDVTHLTFDECHRATGDYAYNY---IAERYHPD-ARDPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D++ F D + E++ EI
Sbjct: 188 EVCENL--GLREVEVMTEEDA-DVDQFTHD------------TDVEWERIDLPEEVIEI- 231
Query: 297 REQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLENLGVCG----ALHAS 344
R+ + +L + L + K LNR+ ++ + N G ++HA
Sbjct: 232 RDALNDVIKDRLEKLKELGVASSTQPDQSQKDLNRMRAELQKLINNDQSEGFKGMSVHAE 291
Query: 345 YILLSGDETM-RNELIEAEGNTID----DSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
+ L T+ + +EA D + AS+AS+ + R +
Sbjct: 292 VMKLRQAVTLVETQSVEAVRRYFDRQRNQARSSGASKASQRLVSDPRVREAMRKAERFDQ 351
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
L + ++L + T L+ + IVF TA AL+ L + S+ V
Sbjct: 352 LHPKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTDFLSD-----SFDAKRFV 402
Query: 460 GVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G G M++ + +L FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 403 GQGDREGSDGMTQKQQQEVLNDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIR 462
Query: 518 FIQSRGR 524
IQ +GR
Sbjct: 463 SIQRKGR 469
>gi|440804445|gb|ELR25322.1| ribonuclease III, putative [Acanthamoeba castellanii str. Neff]
Length = 805
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 136/337 (40%), Gaps = 80/337 (23%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L++ HLF DEG L++ RS VNN L L R +L
Sbjct: 443 QRLEYLGDAVLEFICSAHLFTQLPQHDEGPLSQYRSGLVNNRFLAYLTQRLHLD------ 496
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
++C + +GR + +AD
Sbjct: 497 --------------EQLCYADVAELTQGGKEGR-------------------RNMLADSF 523
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICI-----------SSKSFLPLSA 1208
EAL+GA D G +A F + G + + + + S + + S
Sbjct: 524 EALIGALYLDQGLEACREF--FAGCLFSESEADLRRMWLQPCAHPLQEGPSDRHLIEASP 581
Query: 1209 SLDMAT-LEILLGHQFLHRGLLLQAFVHPSFN------RLGGCYQRLEFLGDAVLDYLIT 1261
+ T LE G +F H LL+QAF H S +LG QRLEFLGDAVL Y++T
Sbjct: 582 IMKGYTKLEEQTGIEFKHIRLLVQAFTHSSLTDDCDTLKLG-TSQRLEFLGDAVLQYVVT 640
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+ LY+ YP GQLT R LVNNQ + D F F+ + + +T D MI
Sbjct: 641 ACLYAHYPDQNEGQLTQYRVALVNNQVLGRIGKDLGFGPFIRYLPSTKEQT--GVTDSMI 698
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNL 1358
D VE+ +GA+ L+ G +
Sbjct: 699 ------------------ADCVEAFIGALFLEKGLEV 717
>gi|405969612|gb|EKC34573.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
Length = 902
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 227/532 (42%), Gaps = 80/532 (15%)
Query: 55 PKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
P R YQLEL + A+ N I+ TG GKT++A+ L + HL K + +FLA
Sbjct: 216 PTLTMRNYQLELAEIALSGRNTIICAETGTGKTYVALYLTQQ--HLASKNDACV-VFLAR 272
Query: 114 TVALVQQQAKVIEESI-GFKV------RTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQIL 166
T ALV+QQ + + +KV +T G K + + ++VL M PQIL
Sbjct: 273 TNALVEQQYEKFSRFLYKYKVYHLKTDKTAAMGRKLAMAK-------ENHQVLFMTPQIL 325
Query: 167 LYCLYHRFIKMELIALLIFDECHHAQVKSNH-----PYAKIMKDFYK---PDIMKVPRIF 218
L + + I ++ ++LLI DECHH + + + Y + +D K P ++ +
Sbjct: 326 LNNINSKQISLQEVSLLILDECHHTRKREPYNNVMKQYLHLKRDSKKTSLPQVLGLTATI 385
Query: 219 GMTASPVVGKGASAQANLPKSINSLE-NLLDAKVYSVEDAEDL-ESFVSSPVVRVYQYGP 276
G+ S + S ++ S++ L+ +++ +E + L E P + +
Sbjct: 386 GVGKSSTLDGAVSHILSVCASLDVLDISMVKNNKEELEKTKKLMEKEKDLPKQIILEKME 445
Query: 277 VINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNR----------LHD 326
+I YV +E + + K ++ +K Q + T NR L
Sbjct: 446 LI----EKYVAKTEVVNQPKLKKQWDKKPKKRDGKQYQKWTIHLRNRVICKLKTEPTLLR 501
Query: 327 SMKFCLENLGVCG-ALHASYILLS-----------GDETMRNELI---EAEGNTIDDSLC 371
+ L +L AL +Y++ S D+ ++++I +A N +D L
Sbjct: 502 QLHAALTHLSTYNEALAVNYLMNSTHVAEFLKQKLADDIKQHKVILKEKASFNDAEDKLL 561
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFV 431
R+ + + + RD I L K LR I + L +K ++FV
Sbjct: 562 RYHEEVCQQLKLL--RDVINDHL-------------KTLRDILVELRTDLGDDVKGMIFV 606
Query: 432 NRIVTARALS-YILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVA 490
TA AL+ YI + LK + +R G SM L+K+R GE+NLLVA
Sbjct: 607 ETRATAFALAKYITEELKMMG-YRAAPFTG------SMLEEEKTDTLKKYRKGEINLLVA 659
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR 542
T VG EG+D+ +I ++ A +Q GRAR S + D QR
Sbjct: 660 TSVGSEGIDVPDSNFIITYNYTGNEADIMQMSGRARRQGSTVTHISDQTIQR 711
>gi|254911056|ref|NP_001157171.1| retinoic acid-inducible gene-I [Salmo salar]
gi|254692471|emb|CAX48607.2| retinoic acid-inducible gene-I [Salmo salar]
Length = 962
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 237/550 (43%), Gaps = 79/550 (14%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ EL + + +N ++ TGCGKT +A+ + HL K + + +F+A V +
Sbjct: 269 REYQRELAEPVFQGKNTVICAPTGCGKTVVALAICEH--HLKVKGKGAKVVFMATKVDVF 326
Query: 119 QQQAKVI-----EESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY-H 172
QQ K+ E+ ++ CG + ++ +++V+ PQIL+ +
Sbjct: 327 NQQYKLFQDHFQEKDPDIRINGLCGNQ---GDQLSMKVVMENNDIIVLTPQILVNAVAGG 383
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASPVV 226
+ +LLI DECH+ K HPY IM + + K +P+I G+TAS V
Sbjct: 384 EITSLSCFSLLILDECHNTTGK--HPYNIIMTSYLDAKLSKEQSGQHLPQIVGLTAS--V 439
Query: 227 GKGA-SAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP-----VVRVYQYGP-- 276
G G+ Q+ +I L LD+++ S + ++L+S+V +P +V P
Sbjct: 440 GIGSFKNQSEAENNICQLCASLDSRIISTIHTNTDELQSYVHTPEKEFFLVEKRHTDPFI 499
Query: 277 -VINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQS----LRNTTKQLNRLHDSMKFC 331
+I D + ++ + I + +SA+ + + Q + + K+ L +K
Sbjct: 500 RIIRDIMAKIEGLAKTVYNI---ESLSAIENRDYGSQKYEQWIVDVQKKCRVLQ--LKDQ 554
Query: 332 LENLGVCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQA---------SEV 380
E VC AL + ++ D + NE +A D L F Q +
Sbjct: 555 EEESRVCRALYNYTEHLRKYNDALIINE--DARTKDALDYLSVFIQQVKNAGHDETEQRL 612
Query: 381 FAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARA 439
A + G+ LS + P KL L IL +R K ++FV A A
Sbjct: 613 TAYFDGQQGVLRGLSSGGQKENP----KLDMLQYILEEQYRQNDETKSVLFVRTRALADA 668
Query: 440 LSYILQNLKFLASWRCHFLVGVNAGLKS-------MSRNAMKSILEKFRS--GELNLLVA 490
L ++ L + L+G G KS M+ N+ K +L+ F+S + +L+A
Sbjct: 669 LKSWIEESDSLKFLKPGVLIG--RGHKSSQLTGTRMTLNSKKGVLDSFKSFDNQSKILIA 726
Query: 491 TKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNF 550
T V +EG+DI C LV+ ++ V +Q RGR R S+ + D ++
Sbjct: 727 TSVADEGIDIPQCNLVLMYEYVGNVVKMVQVRGRGRAQGSKCILVSDKKDR--------I 778
Query: 551 SKEEDRMNRE 560
KE+ M +E
Sbjct: 779 DKEKHNMEKE 788
>gi|448731379|ref|ZP_21713679.1| Hef nuclease [Halococcus saccharolyticus DSM 5350]
gi|445792132|gb|EMA42744.1| Hef nuclease [Halococcus saccharolyticus DSM 5350]
Length = 816
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 215/494 (43%), Gaps = 77/494 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+EL ++A + +V L TG GKT +++L+ H + + LAPT LV
Sbjct: 22 RQYQVELAREAARGHTLVCLPTGLGKTTVSLLVTATRLHEV----GGTALLLAPTKPLVT 77
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q + E++ ++ F G + D E ++ V++ PQ++ L I
Sbjct: 78 QHTEFYREALTIPDEEIVVFTGEVR----PDDREDLFERARVVIATPQVIENDLIGGRID 133
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ ++ L FDECH A + + Y + + Y D + P + GM+ASP G +A
Sbjct: 134 LADVSHLTFDECHRASGEYAYNY---IAERYHAD-SEAPLVTGMSASP----GGDEEA-- 183
Query: 237 PKSINSL-ENL-LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAE 294
I S+ ENL L ED D+ ++ D VT +++
Sbjct: 184 ---IRSVCENLGLSTVAVMTEDDADVAAYTHR------------TDVEWERVTLPDEILA 228
Query: 295 IKREQYISALSRKLHDHQSL---RNTT-----KQLNRLHDSMKFCLENLGVCG----ALH 342
I R+ ++ + +L + L R+T+ + LNR+ ++ ++N G ++H
Sbjct: 229 I-RDALVAVIEDRLEGLKELGVTRSTSADISQRDLNRIRGELQQLIDNDQSEGYEGMSIH 287
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGI 390
A + L R + AE +++ SL R+ AS+A++ F + +
Sbjct: 288 AEVMKL------RRAVTLAETQSVE-SLRRYFERQRNAARSSGASKAAQRFVSEAKVRDA 340
Query: 391 ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
+ + L F ++L + T ++ + IVF TA L+ L F
Sbjct: 341 MDRVERFDDLHPKFRRARIL----LAQTLGIEDGERVIVFTESRDTAETLTDFLGE-HF- 394
Query: 451 ASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
S R G G M++ + L++FR+GE +LV+T V EEGLD+ LV+ ++
Sbjct: 395 -STRKFVGQGDKEGSDGMTQKEQQETLDEFRNGEFEVLVSTSVAEEGLDVPEVDLVLFYE 453
Query: 511 LPETVASFIQSRGR 524
T IQ +GR
Sbjct: 454 PVPTAIRSIQRKGR 467
>gi|356557225|ref|XP_003546918.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 194
Score = 103 bits (258), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 14/131 (10%)
Query: 1456 TKSLESILKSSPKSEARLIGYDETPI--------NVVAADDNVFEKLKISEPQGGSSC-D 1506
+++ +K +P + + D+ + N+V D + S Q SC +
Sbjct: 38 SRAAAKAVKRNPNQRMKFVASDKDIVKNPSLGMGNIVVEDTS-----STSSNQKIQSCGN 92
Query: 1507 IGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPE 1566
SP+ T G++ +ARS LYE+CA NCWKPP F+CCKEEG H ++FTF+VI+EIEA
Sbjct: 93 TTSPTQTEEGMKKGTARSTLYEICAVNCWKPPIFECCKEEGPGHKRMFTFKVIIEIEASR 152
Query: 1567 KIIECIGEPQA 1577
IIEC G P
Sbjct: 153 NIIECYGAPHG 163
>gi|76800822|ref|YP_325830.1| Hef nuclease [Natronomonas pharaonis DSM 2160]
gi|76556687|emb|CAI48259.1| ATP-dependent RNA helicase/nuclease Hef [Natronomonas pharaonis DSM
2160]
Length = 845
Score = 103 bits (257), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 219/526 (41%), Gaps = 67/526 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQL+L + A E++ +V L TG GKT +++L+ E L + K + LAPT LVQ
Sbjct: 24 RRYQLKLAETAAEDHTLVCLPTGLGKTAVSLLVTAE--RLADRGGK--ALLLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ +V F G + WE V+ PQ++ L +
Sbjct: 80 QHAAFYREALTLADDEVVVFTGAVRPDDRAALWE----DASVVCATPQVVENDLVGNRVS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L DECH A + Y + + Y D K P + M+ASP G + L
Sbjct: 136 LRPVTHLTVDECHRATGDYAYNY---IAERYHEDAAK-PLVTAMSASP----GGDKEEIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPVINDTSSSYVTCSEQLA 293
N L + V + DA D++ + V RV VI+ + +E+L
Sbjct: 188 TVCDNL--GLREVAVMTEADA-DVDEYTHHTDVEWERVELPEAVIDIRDNLNEVITERLT 244
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLS 349
++K ++ + + QLN + ++ + N G + HA + L
Sbjct: 245 KLKELGVTTSTDPNM--------SQSQLNAIRAKLQELINNDDSSGYKGMSAHAEIMKLR 296
Query: 350 GDETMRNELIEAEG---------NTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL 400
EL+E + +D+ AS+AS+ F + R + + L
Sbjct: 297 ----RAVELVETQSVESVRRYFERQREDAKSSGASKASQRFVSEPRVQAAMRKATAFDDL 352
Query: 401 KEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL----QNLKFLASWRCH 456
F ++L + T ++ + IVF TA +L+ L + +F+
Sbjct: 353 HPKFRRTRIL----LAQTLGIEGGERVIVFTESRDTAESLTAFLGEHFETRRFVGQ---- 404
Query: 457 FLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD-LPETV 515
G G M++ K L+ FRSGE +LV+T V EEGLD+ LV+ ++ +P+ +
Sbjct: 405 ---GDKDGSDGMTQTEQKETLDAFRSGEFEVLVSTSVAEEGLDVPDVDLVLFYEPVPKGI 461
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
S IQ +GR ++ + + R+ EE RM E+
Sbjct: 462 RS-IQRKGRTGRASDGRVVVLLAEDTRDEAFFWMSRNEEKRMEEEL 506
>gi|255589974|ref|XP_002535144.1| dicer-1, putative [Ricinus communis]
gi|223523936|gb|EEF27239.1| dicer-1, putative [Ricinus communis]
Length = 259
Score = 103 bits (257), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 100/173 (57%), Gaps = 19/173 (10%)
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYL 1264
S SLD +E +L ++F +R LL +AF SF G C Y+RLE +GD+VL+ L T
Sbjct: 29 SPSLD--GVEEILKYKFKNRSLLEEAFTDSSFP--GKCFSYERLEHVGDSVLNLLFTKEH 84
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY----VDYM 1320
Y YP L PG LT LR+ V+ + A VAV F++FL +L E I + ++Y
Sbjct: 85 YFKYPNLPPGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIREFSQAILEYP 144
Query: 1321 ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWK---IMLSFLD 1370
+ + +V PKVL D+VES++GA+ +DS +++TVWK + + F+D
Sbjct: 145 LHSNGLVDV------PKVLADIVESAIGAVFIDSNSSVDTVWKKRNLKVKFVD 191
>gi|62751389|ref|NP_001015545.1| probable ATP-dependent RNA helicase DHX58 [Bos taurus]
gi|59858269|gb|AAX08969.1| hypothetical protein FLJ11354 [Bos taurus]
gi|296476327|tpg|DAA18442.1| TPA: RNA helicase LGP2 [Bos taurus]
Length = 680
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 232/524 (44%), Gaps = 69/524 (13%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI----CIFLAPT 114
R YQ E+ A+E +NII++L TG GKT A A++ R+ +++ + L
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGSGKTRAA-------AYVARRHLETVDGAKVVVLVNR 56
Query: 115 VALVQQQ----AKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
V LV Q ++++E + + T G + + ++++L+ ++L L
Sbjct: 57 VHLVTQHCEEFSRMLERR--WTITTLSGD---MGPRAGFGHVARRHDLLICTAELLQKAL 111
Query: 171 Y----HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTAS 223
+++ +LL+ DECHH + Y I+ + + + + +P++ G+TAS
Sbjct: 112 ASPEEEEHVELNAFSLLVVDECHHTH--KDTVYNIILSQYLELKLQRTRPLPQVLGLTAS 169
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSS 283
P G ++ + + + NL + S +D SP ++ + + P
Sbjct: 170 PGTGGVSTLEGAIDHVLQLCANLDTWCIMSPKD--------HSPQLQEHSHQPC-----K 216
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQL-NRLHDSMKFCL-ENLGVCGAL 341
Y C + + + + L ++HDH + + + ++ L ++ G L
Sbjct: 217 QYDLCHRRTQDPFGD-MLKKLMDQIHDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLL 275
Query: 342 ----HASYILLSGDETMRNELIEAEG--NTIDDSLCRFASQASEVFAA----ICRRDGIA 391
+A ++ D + ++ + A NT+ D R + +++ A + D
Sbjct: 276 EQRVYALHLRRYNDALLIHDTVRAVDALNTLRDFYNRERTTKTQILHAERWLLALFDDHK 335
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
++L+ + + KL L IL FR + I+F +A +L LQ L
Sbjct: 336 NELARLATSGPE--NPKLEVLEAILQRQFRSPDSPRGIIFTRTRQSAHSLLLWLQQQPGL 393
Query: 451 ASWRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTC 503
+ V AG S M++ + +++KFR+G LNLLVAT V EEGLDI C
Sbjct: 394 QTVDIRPQVLTGAGNNSQKTQMIQMTQRDQQEVIQKFRTGTLNLLVATSVAEEGLDIPQC 453
Query: 504 CLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
+V+R+ L S +Q+RGRAR QS Y+F+ G+ QREL
Sbjct: 454 NVVVRYGLLTNEISMVQARGRARASQSVYSFVAAQGSRELQREL 497
>gi|148670597|gb|EDL02544.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_c [Mus musculus]
Length = 533
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 211/519 (40%), Gaps = 62/519 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A + HL + + L V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKR--HL-ETVDRGKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q A+ + + V T G + S + +++L+ ++L L
Sbjct: 61 SQHAEEFRRMLDKHWTVTTLSGD---MGSRAGFGLMARSHDLLICTAELLQLALNSSEED 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y I+ + + + K +P++ G+TASP G
Sbjct: 118 EHVELREFSLIVVDECHHTH--KDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ---------YGPVIND 280
Q + + NL + S ++ + + Y +G +I
Sbjct: 176 TKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGDLIKK 235
Query: 281 TSSS------YVTCSEQLAEIKREQYISALSRKLHDH--QSLRNTTKQLNRLHDSMKFCL 332
+ +Q EQ + L + + Q R L R +D++ F
Sbjct: 236 LMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALHLRRYNDAL-FIH 294
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ + AL + T + +++ AE L + V + R
Sbjct: 295 DTVRARDALDMLQDFYDRERTTKTQMVRAES-----WLLKLFDDHKNVLGQLAARGPENP 349
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
L +E + +L F H + I+F TA +L L+ L +
Sbjct: 350 KLEMLERI--------------LLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQT 395
Query: 453 --WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+ L+G +S M++ + ++++FR G L+LLVAT V EEGLDI C +V+R
Sbjct: 396 VGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVR 455
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
+ L S +Q+RGRAR QS Y+FL G+ +REL
Sbjct: 456 YGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKREL 494
>gi|74142314|dbj|BAE31919.1| unnamed protein product [Mus musculus]
Length = 672
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 211/519 (40%), Gaps = 62/519 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A + HL + + L V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKR--HL-ETVDRGKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH---- 172
Q A+ + + V T G + S + +++L+ ++L L
Sbjct: 61 SQHAEEFRRMLDKHWTVTTLSGD---MGSRAGFGLMARSHDLLICTAELLQLALNSSEED 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y I+ + + + K +P++ G+TASP G
Sbjct: 118 EHVELREFSLIVVDECHHTH--KDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ---------YGPVIND 280
Q + + NL + S ++ + + Y +G +I
Sbjct: 176 TKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGDLIKK 235
Query: 281 TSSS------YVTCSEQLAEIKREQYISALSRKLHDH--QSLRNTTKQLNRLHDSMKFCL 332
+ +Q EQ + L + + Q R L R +D++ F
Sbjct: 236 LMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALHLRRYNDAL-FIH 294
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ + AL + T + +++ AE L + V + R
Sbjct: 295 DTVRARDALDMLQDFYDRERTTKTQMVRAE-----SWLLKLFDDHKNVLGQLAARGPENP 349
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
L +E + +L F H + I+F TA +L L+ L +
Sbjct: 350 KLEMLERI--------------LLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQT 395
Query: 453 --WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+ L+G +S M++ + ++++FR G L+LLVAT V EEGLDI C +V+R
Sbjct: 396 VGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVR 455
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
+ L S +Q+RGRAR QS Y+FL G+ +REL
Sbjct: 456 YGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKREL 494
>gi|226497706|ref|NP_001145700.1| uncharacterized protein LOC100279204 [Zea mays]
gi|219884081|gb|ACL52415.1| unknown [Zea mays]
Length = 270
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 141/281 (50%), Gaps = 42/281 (14%)
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
+++L+IFDECHHA NHPY +IMK+FY K P +FGMTASP++ KG S+ +
Sbjct: 1 MVSLMIFDECHHA--TGNHPYTRIMKEFYHGSEHK-PNVFGMTASPIIRKGVSSDLDCKN 57
Query: 239 SINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
++ LEN+LD+K++SV D E++E V S V R Y+ V S+ SE+L EI
Sbjct: 58 QLSELENILDSKIHSVVDREEIELCVPSAKEVNRYYEPRTV------SFDDLSEEL-EIL 110
Query: 297 REQY----ISALSRKLHDHQSLRNTTKQ-LNRLHDSMK---FCLENLGVCGALHASYILL 348
+Y I +R + ++ TK+ RL +S+ +CLE+ G+ A A+ I +
Sbjct: 111 CSKYDGLIIQLHNRSTNQYKDADEITKESRKRLSNSLAKICYCLEDAGLLCASEATKICI 170
Query: 349 SGDETMRNELIEAEGNTIDDSLCR-----FASQA-------SEVFAAICRR----DGI-- 390
+ R ++ +T D + FA + EV I +R GI
Sbjct: 171 --ERGQRKGWLKGGSDTTDQQSGQNGPILFAEISMLHMEFFQEVLDIIGKRVQQQQGIDA 228
Query: 391 --ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIV 429
S+ C+E + S KL L+ + +F +++C++
Sbjct: 229 LLNSERGCVEAKNMGYISPKLYELMQVFLSFSDPDNVRCLI 269
>gi|13194586|gb|AAK15474.1| unknown [Mus musculus]
gi|13194588|gb|AAK15475.1| unknown [Mus musculus]
gi|20809730|gb|AAH29209.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Mus musculus]
gi|148670596|gb|EDL02543.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_b [Mus musculus]
Length = 678
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 211/519 (40%), Gaps = 62/519 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A + HL + + L V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKR--HL-ETVDRGKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH---- 172
Q A+ + + V T G + S + +++L+ ++L L
Sbjct: 61 SQHAEEFRRMLDKHWTVTTLSGD---MGSRAGFGLMARSHDLLICTAELLQLALNSSEED 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y I+ + + + K +P++ G+TASP G
Sbjct: 118 EHVELREFSLIVVDECHHTH--KDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ---------YGPVIND 280
Q + + NL + S ++ + + Y +G +I
Sbjct: 176 TKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGDLIKK 235
Query: 281 TSSS------YVTCSEQLAEIKREQYISALSRKLHDH--QSLRNTTKQLNRLHDSMKFCL 332
+ +Q EQ + L + + Q R L R +D++ F
Sbjct: 236 LMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALHLRRYNDAL-FIH 294
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ + AL + T + +++ AE L + V + R
Sbjct: 295 DTVRARDALDMLQDFYDRERTTKTQMVRAES-----WLLKLFDDHKNVLGQLAARGPENP 349
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
L +E + +L F H + I+F TA +L L+ L +
Sbjct: 350 KLEMLERI--------------LLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQT 395
Query: 453 --WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+ L+G +S M++ + ++++FR G L+LLVAT V EEGLDI C +V+R
Sbjct: 396 VGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVR 455
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
+ L S +Q+RGRAR QS Y+FL G+ +REL
Sbjct: 456 YGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKREL 494
>gi|70608133|ref|NP_084426.2| probable ATP-dependent RNA helicase DHX58 [Mus musculus]
gi|341940441|sp|Q99J87.2|DHX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName:
Full=Probable ATP-dependent helicase LGP2; AltName:
Full=Protein D11Lgp2; AltName: Full=RIG-I-like receptor
3; Short=RLR-3; AltName: Full=RIG-I-like receptor Lgp2;
Short=RLR
Length = 678
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 211/519 (40%), Gaps = 62/519 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A + HL + + L V LV
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKR--HL-ETVDRGKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH---- 172
Q A+ + + V T G + S + +++L+ ++L L
Sbjct: 61 SQHAEEFRRMLDKHWTVTTLSGD---MGSRAGFGLMARSHDLLICTAELLQLALNSSEED 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y I+ + + + K +P++ G+TASP G
Sbjct: 118 EHVELREFSLIVVDECHHTH--KDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ---------YGPVIND 280
Q + + NL + S ++ + + Y +G +I
Sbjct: 176 TKLQGAIDHILQLCANLDTCHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFGDLIKK 235
Query: 281 TSSS------YVTCSEQLAEIKREQYISALSRKLHDH--QSLRNTTKQLNRLHDSMKFCL 332
+ +Q EQ + L + + Q R L R +D++ F
Sbjct: 236 LMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALHLRRYNDAL-FIH 294
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
+ + AL + T + +++ AE L + V + R
Sbjct: 295 DTVRARDALDMLQDFYDRERTTKTQMVRAES-----WLLKLFDDHKNVLGQLAARGPENP 349
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
L +E + +L F H + I+F TA +L L+ L +
Sbjct: 350 KLEMLERI--------------LLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQT 395
Query: 453 --WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIR 508
+ L+G +S M++ + ++++FR G L+LLVAT V EEGLDI C +V+R
Sbjct: 396 VGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVR 455
Query: 509 FDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QREL 544
+ L S +Q+RGRAR QS Y+FL G+ +REL
Sbjct: 456 YGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKREL 494
>gi|427780811|gb|JAA55857.1| Putative ribonuclease [Rhipicephalus pulchellus]
Length = 886
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 138/338 (40%), Gaps = 81/338 (23%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ERLE LGDA +++ HLF + ++EG L R+ V N +L LA + L+ Y+
Sbjct: 434 ERLEFLGDAVVEFLSSIHLFFMFPDLEEGGLATYRAAIVQNQHLAVLAKKLELEKYM--- 490
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
+A G DL ++ + +A+
Sbjct: 491 ------LYAHG------------------------SDLCHDLEL--------RHAMANCF 512
Query: 1160 EALVGAFIDDSGFKAATAFLK------------WIGIQVEFEASQVTNICISSKSFLPLS 1207
EAL+GA DSG K A WI QV S +PL
Sbjct: 513 EALMGALFLDSGIKVADRVFSSTLFSEPDLRDVWINYPPHPLQEQVPEGDRKWISTVPLL 572
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPS--FNRLG-GCYQRLEFLGDAVLDYLITSYL 1264
L+ E L G +F H LL +AF H S FN L G QRLEFLGD VL + + YL
Sbjct: 573 KKLN--EFEQLTGIEFNHIRLLAKAFTHRSIGFNNLTLGSNQRLEFLGDTVLQLVASEYL 630
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS 1324
Y +P+ G L+ LRS LVNN+ A V D VD+ I P
Sbjct: 631 YKYFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGM------------------VDFTIYPY 672
Query: 1325 STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVW 1362
+ E+K R D++E+ LGA+ +D G V+
Sbjct: 673 AKAELKTKDR-----ADILEAFLGALFVDKGLEYCNVF 705
Score = 50.1 bits (118), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 1243 GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFL 1302
G +RLEFLGDAV+++L + +L+ ++P L+ G L R+ +V NQ A +A K++
Sbjct: 431 GHNERLEFLGDAVVEFLSSIHLFFMFPDLEEGGLATYRAAIVQNQHLAVLAKKLELEKYM 490
Query: 1303 IF 1304
++
Sbjct: 491 LY 492
>gi|325185212|emb|CCA19701.1| dicerlike putative [Albugo laibachii Nc14]
Length = 760
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q + +A N+++ TG GKT++A++L+ + + K F+APT LV
Sbjct: 13 RSFQQHILSRARHNNVVMVGDTGIGKTYVAIVLLSQQDYSRNKR----AFFMAPTRQLVL 68
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
Q I + VR +C WE+E+ + V V PQ++ L +I M+
Sbjct: 69 QIESKIRQITTLPVRAYCSSEFDYWDEYQWEQELGFHRVFVTTPQVVRNALEKGYISMKN 128
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM--KVPRIFGMTASPV 225
I LL+FDECHH V HPYA IMK Y P+ PRIFG TA P
Sbjct: 129 INLLVFDECHH--VSKRHPYAHIMK-LYDPNAHPDDKPRIFGATACPT 173
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 473 MKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
MK+IL++F+ G+ +LV+T V EG+D C L++ D + IQ RGRAR
Sbjct: 516 MKTILDRFQQGKTRMLVSTSVSVEGVDFPLCGLIVVMDPVTSPRMLIQLRGRARHNDGAI 575
Query: 533 AFLVDSG------NQRELDLIK-------NF-SKEEDRMNREIMDRTSSDAFTC---SEE 575
+L + G N + L L+K NF S +++ ++ + ++ D TC +++
Sbjct: 576 YYLGEEGDVMDEVNYKSL-LVKAEQINAMNFESDKQETLHNQPRSKSVRDLQTCQFVADD 634
Query: 576 RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEF-FNPKPKFYYFDDLGGTICH------- 627
+ S+GA I S LH++C LP F NP+ K + + L T H
Sbjct: 635 CQVAIKSTGAIIDLDSSTSSLHQFCQSLPPLLFDVNPQ-KLFTIESL--TTAHNKQMYKA 691
Query: 628 -IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+ LP + S AK A L+A L++ G L+D L
Sbjct: 692 KVSLPNQLGVSACESGLMPSKSLAKAVAALRACRSLYEQGLLDDKL 737
>gi|222615621|gb|EEE51753.1| hypothetical protein OsJ_33185 [Oryza sativa Japonica Group]
Length = 726
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 207/490 (42%), Gaps = 53/490 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ + +KA+ N +V L TG GKT IA +++Y P+ I +F APT LV
Sbjct: 249 REYQKKFVEKALFTNTLVALPTGLGKTFIAAVVMYNYFRWF--PEGKI-VFTAPTRPLVT 305
Query: 120 QQAKVIEESIGFKVR---TFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ + ++G G K C W+ + V + PQ+L +
Sbjct: 306 QQIEACHNTVGIPQEWTIDLKGNLSPSKRSCFWKSK----RVFFVTPQVLQNDIQSGICM 361
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVP-RIFGMTASPVVGKGASAQAN 235
+ + L+ DE H A N+ Y ++++ + +VP RI +TA+P S Q
Sbjct: 362 VNQLVCLVIDEAHRA--SRNYAYCVVVREL---EAARVPLRILALTATP-----GSKQPA 411
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQ-------YGPVINDTSSSYVTC 288
+ IN+L + V+ E ++ ++ V + + PV ++
Sbjct: 412 IQNVINNLR--ISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGDEAEQ----V 465
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRN-TTKQLNRLHDSM------KFCLENLGVCGAL 341
+++L ++ R + S ++ DH+ N + QL L D L + G
Sbjct: 466 NDKLLDVIRPHLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQAPPPNIPLADKKEIGIS 525
Query: 342 HASYILLSGDETMRNEL-IEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE-V 399
+ LL G M I+A +I+ A + + R + +E
Sbjct: 526 FQALTLLYGIMKMLLSYGIKAAHQSIE------AKYKEGSWKVLTRNNTFLEVKKTMENF 579
Query: 400 LKEPFFSKKLLRLIGI-LSTFRLQ-QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
L + S K+ L+ + L FR + + I+F + + + L+N+ F
Sbjct: 580 LSQGILSPKVRTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRNIDGELVRPAAF 639
Query: 458 LVGVNAG--LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ + G LK ++ ++IL KFRSGE N+LVAT +GEEGLDI LV+ FD +
Sbjct: 640 IGQSSTGDQLKGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVDLVVCFDANISA 699
Query: 516 ASFIQSRGRA 525
IQ GR
Sbjct: 700 LRMIQRMGRT 709
>gi|391873779|gb|EIT82787.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1089
Score = 102 bits (255), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 22/268 (8%)
Query: 426 KCIVFVNRIVTARALSYILQNL-KFLASWRCHFLVGVNAGLKSMSR-------NAMKSIL 477
+ ++FV+ T AL ++++N + +RC VG++ +S +R + L
Sbjct: 127 RALIFVSLRATVLALKWLIENHPETRRRFRCGTFVGMSRIHQSKTRLGDVHDIRSQMETL 186
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE-YAFLV 536
+KFR G L+L++ T EEG+DI C V+ F+ + SFIQ RGRAR QS+ + FL
Sbjct: 187 QKFRDGVLDLIITTDALEEGMDIPACNTVLNFNCILNLKSFIQRRGRARREQSKFFIFLQ 246
Query: 537 DSGNQRELDLIKNFSKEEDRMNREIMD--RTSSDAFTCSEERIYK----VDSSGACISAG 590
D + + + L++ E + R++ D RT +ER+ S+GA ++ G
Sbjct: 247 DEEDLKNVSLLQF---RESELVRKLQDEGRTVLPDSLNHDERLRDSLAFSSSTGAQMTMG 303
Query: 591 YGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHII-LPANA-PIHQIVGTPQ--SS 646
+S L+R+C +LP F + P F Y D G + I+ LP+N P Q + + +
Sbjct: 304 NAISHLYRFCGELPAQPFVSNSPAFSYETDECGQVQAIVRLPSNLDPSLQTFKSLRKWAK 363
Query: 647 MEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ AK+DA L+A + L +ND+ LP
Sbjct: 364 KKWAKEDAALQAYKALFHARLINDHFLP 391
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 198/469 (42%), Gaps = 82/469 (17%)
Query: 938 PLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKD----IGSSLSLL-PSI 992
PL R RN L++ K+ E + + L +L + D I + +LL PSI
Sbjct: 592 PLTRRRNFLYDPKIVTVTPTENQHSTSLVRQGLSELAADDYLVDRLPSIYAEAALLAPSI 651
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVS-AEMLLKALTTEKCQERFSLERLEILGDAFLK 1051
+HR+ L+A +L+ + ++ P+ A ++L AL+ R + +GDA +K
Sbjct: 652 IHRIGVYLIAEKLRKQIFSN-PQAARFERMDLLCIALSPTDDMHRHEFRSMAFIGDAIVK 710
Query: 1052 YAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR 1111
+ + R LFL H EG LT + + V+++ L + Y+ F+ G+
Sbjct: 711 FLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLITTRFN-------GK 763
Query: 1112 RC-PRICSKETERT--IHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFID 1168
R P S ++ +Y G A T+AD+V+AL GA
Sbjct: 764 RWRPSFVSTTLSKSGPTRRRYVGAA--------------------TVADMVKALAGAAFL 803
Query: 1169 DSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT---LEILLGHQFLH 1225
D+G A F+ + + ++ ++ + S S SL +T LE LLG+ F
Sbjct: 804 DNGLDQA--FICAAAMIPKIKSWTTISLYDGTYSKSRPSKSLGASTIIDLEALLGYTFSD 861
Query: 1226 RGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
+ L +++ HPS L G Y+RL FLG +++ ++ YL+ +L L+S +
Sbjct: 862 KSLAIESMTHPSCVGLYGTASYRRLSFLGAGIIELVVVRYLHRQKSFTSSKRLQSLKSAV 921
Query: 1284 VNNQAFAN-------------VAVDQ-------------SFYKFLIFDSNVLSETINNYV 1317
NN A + VD + Y FL S+ LS+ +++ V
Sbjct: 922 TNNMFLAFLCLTFHWEKQHDIIEVDSMGVPSVIQTRGRVALYHFLRSQSDSLSDKVSSLV 981
Query: 1318 DYMITPSST--REVKEGPRCP----------KVLGDLVESSLGAILLDS 1354
+ + + R++ E P KV D+V+S GAI +DS
Sbjct: 982 EDLTSQLHVIKRDLWENGIYPWARLSVFRGLKVFSDIVQSVFGAIYIDS 1030
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
++ + F+GDA++ +LIT L+ + G LT ++ +V++ A F +LI
Sbjct: 698 FRSMAFIGDAIVKFLITRQLFLHHTLWHEGLLTSVKDSIVSDTGLAAALCHSGFGSYLI- 756
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLG-----DLVESSLGAILLDSGFN 1357
T N + + ST K GP + +G D+V++ GA LD+G +
Sbjct: 757 ------TTRFNGKRWRPSFVSTTLSKSGPTRRRYVGAATVADMVKALAGAAFLDNGLD 808
>gi|448721282|ref|ZP_21703850.1| Hef nuclease [Halobiforma nitratireducens JCM 10879]
gi|445778400|gb|EMA29349.1| Hef nuclease [Halobiforma nitratireducens JCM 10879]
Length = 808
Score = 102 bits (255), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 201/484 (41%), Gaps = 57/484 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ +++ PQ++ L +
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPEDRAETWEEAT----IVMATPQVIENDLVGSRVS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 136 LSGVTHCTFDECHRA--TGDYAYNYIAERYHAD--AKQPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D+ F + + D + + + L E+
Sbjct: 188 EVCENL--GIEEVEVMTEEDA-DVSEFTHETDIEWERI-----DLPEAVLEIRDALNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + D + K+LN + ++ + N G ++HA + L
Sbjct: 240 KERLEKLKEMGIADSTQPDQSQKELNAMRAELQKLINNDQSEGFEGMSIHAEVMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG--IASDLSCIEVLKE-------- 402
R + E +++ F Q ++ ++ + + SD E +++
Sbjct: 296 --RQAVTLVETQSVEAVRRYFERQRNQAQSSGASKASQRLVSDPRVREAMRKAESFDQLH 353
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
P + K + L T L+ + IVF TA AL+ L S+ VG
Sbjct: 354 PKYRKARMLLA---ETLGLEDGERVIVFTESRDTAEALTDFLSE-----SFEAKRFVGQG 405
Query: 463 --AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
G M++N + +LE FR+GE +LV+T V EEGLD+ LV+ ++ T IQ
Sbjct: 406 DREGSDGMTQNEQQEVLEDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 521 SRGR 524
+GR
Sbjct: 466 RKGR 469
>gi|330508988|ref|YP_004385416.1| DEAD/DEAH box helicase domain-containing protein [Methanosaeta
concilii GP6]
gi|328929796|gb|AEB69598.1| DEAD/DEAH box helicase domain protein [Methanosaeta concilii GP6]
Length = 762
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 234/538 (43%), Gaps = 90/538 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q++L A++ + ++ + TG GKT IA++++ LA L K +FLAPT LV+
Sbjct: 18 RLFQMDLAASALKSSSLIVVPTGLGKTVIALMVL--LARL----DKGRVLFLAPTKPLVE 71
Query: 120 QQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
Q A + + +V G K WE + V PQ++ L R I +
Sbjct: 72 QHAAFLRRVLKDEGEVTMMTGEMMPEKRKAAWEA----ARITVSTPQVIENDLLSRRIDL 127
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ--AN 235
E I+L+IFDE H A N+ Y I + + + P + G+TASP K A+ N
Sbjct: 128 EDISLIIFDEAHRAV--GNYAYVYIAERYAREGTN--PLVLGITASPGSEKEKIAEICTN 183
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
L S+EN+ + S +D+ D+ FV S + + +T ++L +I
Sbjct: 184 L-----SIENI---QTRSEKDS-DVAPFVHSKQIEWVK------------LTVPKELLDI 222
Query: 296 KREQYISALSRKLHDHQSLRNTTKQLNRLH------DSMKFCLENLGVCGALHASYILLS 349
+ +A+ + LR+ LNRL D E LG+ L +S +
Sbjct: 223 R-----TAI------EEVLRDRIDDLNRLGISPVKIDPRATKKELLGLQAMLMSSAKRQA 271
Query: 350 GDETMRN--------------ELIEAEGNTI---------DDSLCRFASQASEVFAAICR 386
T + EL E +G +++ R S+AS I
Sbjct: 272 NQATFKGISILAEVLKLYHAIELAETQGTEALLKYFQRLQGEAISRSGSKASR---RIME 328
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
+ +E L+ ++R I + + + +VF N TA AL L+
Sbjct: 329 DSKFRQAMQALEDLQVEHPKPAMVRKI-LTEQIEAKPESRIMVFTNYRDTASALIRFLKE 387
Query: 447 LKFLASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ + R VG + A + +S+ IL++FR+GE N+L+AT VGEEG+DI
Sbjct: 388 DPKIKAVR---FVGQSSRADDEGLSQKKQAEILQRFRAGEYNVLIATSVGEEGIDIPATD 444
Query: 505 LVIRFD-LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
+V+ ++ +P + S IQ +GR +S ++ + R+ ++E MN+++
Sbjct: 445 MVLFYEPVPSEIRS-IQRKGRTGRARSGRVVVLMARGTRDEAYYWISDRKEKTMNKQM 501
>gi|145489315|ref|XP_001430660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830695|emb|CAI39097.1| Dicer-like ribonuclease with mutated helicase and Rnase III domains
[Paramecium tetraurelia]
gi|124397759|emb|CAK63262.1| unnamed protein product [Paramecium tetraurelia]
Length = 1596
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 130/248 (52%), Gaps = 34/248 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ+EL +K + +N I+YL TG GKT + ++L+++ L + P K I +FLA TV LV+
Sbjct: 112 RDYQIELYEKGIGKNSIIYLETGLGKTLVIIMLMWD--RLFKYPDKKI-VFLANTVQLVE 168
Query: 120 QQAKVIEES--------------------IGFKVRTFCGGS-KRLKSHCDWEKEIDQYEV 158
QQA+ I++ IG K+ G + + W+ +++ ++
Sbjct: 169 QQAQQIKQKLPRVAELISDDDSMIVKAKEIGSKLNVLHGSKCTDIWNQIMWQIILEESKI 228
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMK 213
LVM QI L L +K+ + + DECH+A +HPY I+K+FY + D
Sbjct: 229 LVMTTQIFLNILRKGLVKISNFSFIAMDECHNA--IQDHPYNYILKEFYLKTKFQSDNQF 286
Query: 214 VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVS-SPVVRVY 272
+P+I G TASPV+ + + L + + L +D++ + DA++L+ + + +V +Y
Sbjct: 287 LPQIVGATASPVMNSKSVSNNQLLQELLQLSANMDSQYLHI-DAQNLKKHIKEAQIVPIY 345
Query: 273 QYGPVIND 280
Y + ND
Sbjct: 346 -YKMLFND 352
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
+S I+ KFR G++ +L++T V EEG+DI C VI F+ + +++Q +GRAR
Sbjct: 607 ISSTVQNDIINKFRQGKIKILISTSVAEEGIDIPMCNYVIGFNPISSSKAYVQMKGRARK 666
Query: 528 PQSEYA-FLVDS-------GNQRELDLIKNFSKE-----EDRMNREIMDRTSSDAFTCSE 574
S++ F+VD +Q+ + IK +E +M + M S + +
Sbjct: 667 ENSQFMIFMVDKLQQAQVQSHQQVQNNIKQIIEELTAPQRQQMLNKAMQTLQSKTYENTY 726
Query: 575 ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT------ICHI 628
++++ SGA I+ + L+ + C K + +PK+ + G I +
Sbjct: 727 FDSFEIEGSGALINTNWSCQLIQQLCQKFNQKDADKTQPKYAIYQLHGNAQTNQQFIAFL 786
Query: 629 ILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+LP + G S + AK A +A L++ G ++D L
Sbjct: 787 LLPISMKSFIFYGKLAPSSKDAKASAAFEASVQLYQKGYIDDNL 830
>gi|242221926|ref|XP_002476701.1| predicted protein [Postia placenta Mad-698-R]
gi|220724029|gb|EED78105.1| predicted protein [Postia placenta Mad-698-R]
Length = 232
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALT QE + +RLE LGD LKY LF + EG L RR+ +AV+N L K
Sbjct: 1 ALTAPVAQELINYQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKC 60
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
A L +I F P ++ P TE + N + +
Sbjct: 61 AISKGLYQWIIRDRFVPRKWRPHYMSGPEDIGSRTE----------GANGNNDDKKKKTK 110
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNIC--ISSK 1201
L K +ADVVE+L+GA + GF A + G+ + + + NI I
Sbjct: 111 TQELSTKVLADVVESLIGAAYEHGGFDLAVNCISIFGLGLPSWQTIPQHIDNIMTKIEEL 170
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYL 1259
+ P SL +E +LG++F H+ LL+QA H S+ + Y+RLEFLGD+ LD +
Sbjct: 171 DYPPPQLSL----VETMLGYEFTHKALLVQALTHASYHGDLTTMSYERLEFLGDSALDMV 226
Query: 1260 ITSYLY 1265
+T +LY
Sbjct: 227 VTDWLY 232
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLE LGD VL Y+ + L++ YP G L + V+N A A+ + Y+++I
Sbjct: 13 YQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKCAISKGLYQWIIR 72
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR---------------CPKVLGDLVESSLGA 1349
D V + + YM P EG KVL D+VES +GA
Sbjct: 73 DRFVPRKWRPH---YMSGPEDIGSRTEGANGNNDDKKKKTKTQELSTKVLADVVESLIGA 129
Query: 1350 ILLDSGFNL 1358
GF+L
Sbjct: 130 AYEHGGFDL 138
>gi|383412907|gb|AFH29667.1| putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
Length = 678
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 223/517 (43%), Gaps = 62/517 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A Y + + + L V LV
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAA---YVAKRHLETVDGAKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q + + + V T G + + +++L+ ++L L
Sbjct: 61 TQHGEEFRRMLDGRWTVTTLSGD---MGPRAGFGHLARCHDLLICTAELLQMALTSPEEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y IM + + + + +P++ G+TASP G G
Sbjct: 118 EHVELTAFSLIVVDECHHTH--KDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGTG-G 174
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESF-VSSPVVRVYQYGPVINDTSSSYVTC 288
AS L+ +D ++++ +L+++ + SP Y P + + S C
Sbjct: 175 AS----------KLDGAID---HALQLCANLDTWCIMSP----QNYRPRLQEHSQQ--PC 215
Query: 289 SEQLAEIKREQ-----YISALSRKLHDHQSLRNTTKQL-NRLHDSMKFCLENLGVCGAL- 341
+ +R Q + L ++HDH + ++ ++++ L L
Sbjct: 216 KQYNLCHRRSQDPFGDLLKKLMDQVHDHLEMPELSRNFGTQMYEQQVVKLSEAAALAGLQ 275
Query: 342 ----HASYILLSGDETMRNELIEAEGN--TIDDSLCRFASQASEVFAAICRR----DGIA 391
+A ++ D + ++ + A + D R +++ A R DG
Sbjct: 276 EQRVYALHLRRYNDALLIHDTVRAVDALAALQDFYHREHVTKTQILCAERRLLALFDGHK 335
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
+ L+ + ++L I + FR + I+F +A +L LQ L
Sbjct: 336 NVLAHLATHGPENPKLEMLEKI-LQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQ 394
Query: 452 S--WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVI 507
+ R L+G +S M++ + ++ KFR G LNLLVAT V EEGLDI C +V+
Sbjct: 395 TVDIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVV 454
Query: 508 RFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
R+ L S +Q+RGRAR QS Y+F+ G+ REL
Sbjct: 455 RYGLLTNEISMVQARGRARADQSVYSFVATEGS-REL 490
>gi|448737900|ref|ZP_21719932.1| Hef nuclease [Halococcus thailandensis JCM 13552]
gi|445802761|gb|EMA53063.1| Hef nuclease [Halococcus thailandensis JCM 13552]
Length = 811
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 232/538 (43%), Gaps = 91/538 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ EL +A + +V L TG GKT +++L+ + H Q + LAPT LV
Sbjct: 22 RRYQAELADQAASGHTLVCLPTGLGKTTVSLLVTAQRLH----EQGGTSLLLAPTKPLVT 77
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ ++ ++ F G S D E+ ++ V++ PQ++ L I
Sbjct: 78 QHAEFYRAALTIPDDEIVVFTGEV----SPDDREELFERARVVIATPQVVENDLIGGRID 133
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ L FDECH A ++ Y I + ++ + P + GM+ASP G +A
Sbjct: 134 LSDTTHLTFDECHRA--SGDYAYNYIAERYHAD--AEQPLVTGMSASP----GGDREA-- 183
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY--VTCSEQLAE 294
+S+ L + V + EDA+ V Y +DTS + VT +++
Sbjct: 184 IQSVCENLGLANVAVMTEEDAD------------VADY---THDTSVEWERVTLPDEILA 228
Query: 295 IKREQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLENLGVCG----ALH 342
I R+ ++ + +L + L +TT + LNR+ ++ ++N G ++H
Sbjct: 229 I-RDSLVAVIEDRLEKLKELGVSHTTSADISQRDLNRIRSELQQLIDNDQSEGYEGMSIH 287
Query: 343 ASYILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLSC 396
A + L R + AE +++ SL R+ A+++S A R + S+
Sbjct: 288 AEVMKL------RRAVTLAETQSVE-SLRRYFERQRNAARSSGASKASQR---LVSEAKV 337
Query: 397 IEVLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL---- 444
E +++ P F + + L L + + IVF TA L+ L
Sbjct: 338 REAMEQAETYDDLHPKFRRTRILLAQCLG---IDGGERVIVFTESRDTAETLTEFLGAHF 394
Query: 445 QNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+ KF+ G G M++N + L+ FR+GE +LV+T V EEGLD+
Sbjct: 395 ETRKFVGQ-------GDKEGSDGMTQNEQQETLDAFRAGEFEVLVSTSVAEEGLDVPEVD 447
Query: 505 LVIRFDLPETVASFIQSRGR-ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
LV+ ++ T IQ +GR R + L+ + E K+ E+ RM E+
Sbjct: 448 LVLFYEPVPTAIRSIQRKGRTGRQTEGRVMVLLAEDTRDEAYFWKS-RHEQSRMTDEL 504
>gi|218185362|gb|EEC67789.1| hypothetical protein OsI_35346 [Oryza sativa Indica Group]
Length = 648
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 224/540 (41%), Gaps = 63/540 (11%)
Query: 11 SQPSGGGTKICAATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQI-ARKYQLELCKK 69
S +G G A V + C+VA+ A +T P + R+YQ + +K
Sbjct: 130 SDRAGEGCSRRADEDVVPKPCAVALDH---------EAARTWIYPTNVQVREYQKKFVEK 180
Query: 70 AMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESI 129
A+ N +V L TG GKT IA +++Y P+ I +F APT LV QQ + ++
Sbjct: 181 ALFTNTLVALPTGLGKTFIAAVVMYNYFRWF--PEGKI-VFTAPTRPLVTQQIEACHNTV 237
Query: 130 GFKVR---TFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFD 186
G G K C W+ + V + PQ+L + + + L+ D
Sbjct: 238 GIPQEWTIDLKGNLSPSKRSCFWKSK----RVFFVTPQVLQNDIQSGICMVNQLVCLVID 293
Query: 187 ECHHAQVKSNHPYAKIMKDFYKPDIMKVP-RIFGMTASPVVGKGASAQANLPKSINSLEN 245
E H A N+ Y ++++ + +VP RI +TA+P S Q + IN+L
Sbjct: 294 EAHRA--SRNYAYCVVVREL---EAARVPLRILALTATP-----GSKQPAIQNVINNLR- 342
Query: 246 LLDAKVYSVEDAEDLESFVSSPVVRVYQ-------YGPVINDTSSSYVTCSEQLAEIKRE 298
+ V+ E ++ ++ V + + PV ++ +++L ++ R
Sbjct: 343 -ISELVHCDESDPEVSRYIQRRTVEPLEVCMDSDKFIPVGDEAEQ----VNDKLLDVIRP 397
Query: 299 QYISALSRKLHDHQSLRN-TTKQLNRLHDSM------KFCLENLGVCGALHASYILLSGD 351
+ S ++ DH+ N + QL L D L + G + LL G
Sbjct: 398 HLVKLRSARVIDHRDASNWSPHQLRMLKDKFDQAPPPNIPLADKKEIGISFQALTLLYGI 457
Query: 352 ETMRNEL-IEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE-VLKEPFFSKKL 409
M I+A +I+ A + + R + +E L + S K+
Sbjct: 458 MKMLLSYGIKAAHQSIE------AKYKEGSWKVLTRNNTFLEVKKTMENFLSQGILSPKV 511
Query: 410 LRLIGI-LSTFRLQ-QHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG--L 465
L+ + L FR + + I+F + + + L+N+ F+ + G L
Sbjct: 512 RTLVEVLLDHFRKNPKDSRVIIFAHYRECVKEILCSLRNIDGELVRPAAFIGQSSTGDQL 571
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRA 525
K ++ ++IL KFRSGE N+LVAT +GEEGLDI LV+ FD + IQ GR
Sbjct: 572 KGQTQKMQQAILHKFRSGEYNILVATSIGEEGLDIMEVDLVVCFDANISALRMIQRMGRT 631
>gi|19114536|ref|NP_593624.1| ATP-dependent 3' to 5' DNA helicase (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698622|sp|Q9HE09.1|MFH2_SCHPO RecName: Full=Putative ATP-dependent RNA helicase mfh2; AltName:
Full=FancM homolog protein 2
gi|12038920|emb|CAC19734.1| ATP-dependent 3' to 5' DNA helicase (predicted)
[Schizosaccharomyces pombe]
Length = 783
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 213/512 (41%), Gaps = 69/512 (13%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVA 116
Q R YQ E C++A+ N+++ L TG GKT IA +++ L + P+ I IFLAPT
Sbjct: 109 QQYRNYQKEFCEQALFHNLLLALPTGLGKTFIAAVVM--LNYFRWFPESKI-IFLAPTKP 165
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQY---EVLVMIPQILLYCLYHR 173
L+ QQ G G + L ++ + +Y V M PQ L L
Sbjct: 166 LLLQQRVACSNVAGMSP----GATAELNGEVSPDRRLFEYNTKRVFFMTPQTLQNDLKEH 221
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQ 233
+ + I LIFDE H A NH YA++M+ + + R+ G+TA+P S+
Sbjct: 222 LLDAKSIICLIFDEAHRA--TGNHSYAQVMRAVLRSN--SHFRVLGLTATP-----GSST 272
Query: 234 ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYVTCSEQ 291
A++ K ++ L + + E++ D+ S+V +++ + +N S +
Sbjct: 273 ASVQKVVDCLH--ISKLIVRNEESIDIRSYVFHKKIQLIKVTISSEMNILKSDFANLYRP 330
Query: 292 LAEIKREQ--------------YISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV 337
R++ Y +S + + S +K+ +++ C L
Sbjct: 331 YFNFLRQKKLIPINCECLNIKAYTLFVSLRKYSFSSKNVQSKEKSKIMS----CFTLLIS 386
Query: 338 CGALHASYIL-LSGDETMRNELIE----AEGNTIDDSLCRFASQASEVFAAICRRDGIAS 392
C H +Y+L G +L+E AEG S F S+ +
Sbjct: 387 CA--HITYLLDCHGIIQFYQKLVETKNKAEGKGSGQSFWLFTSKPFAFYLEHLHNKIQGL 444
Query: 393 DLS------CIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
L+ +E+LKE F T Q+ + ++F TA ++ L
Sbjct: 445 SLNHPKMNHLLELLKEHF-----------KDTSEGYQNQRVMIFTEFRNTAEYITTTLLA 493
Query: 447 LKFLASWRCHFLVGVNAGLKSMSRNAM--KSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
++ + R +G S N M K +++FR+G +N LVAT +GEEGLDI
Sbjct: 494 IRPMV--RASLFIGQANSAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTD 551
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
++I +D + IQ GR +S F++
Sbjct: 552 MIICYDASSSPIRTIQRMGRTGRKKSGKVFVL 583
>gi|327349134|gb|EGE77991.1| dicer [Ajellomyces dermatitidis ATCC 18188]
Length = 1482
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 31/223 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YEL----AHLIRKPQKSICIFLAPT 114
R YQLE+ + ++ ENII+ + TG GKT +A+L I +EL AH + FLAPT
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIRHELETCAAH-------KLVWFLAPT 100
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ K I + + ++ R G + W+ + ++V PQ+LL +
Sbjct: 101 VALADQQHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDILLNIRIVVSTPQVLLDAMT 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASPV 225
H F+ M IALL+FDE HH N +M+ FY + + +P I G+TASP+
Sbjct: 161 HGFMTMSRIALLVFDEAHHC--AENEAPNILMQRFYHEQLQRTGTANDLPHILGLTASPI 218
Query: 226 VGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSP 267
PK + +E+ L+++ + E+L +V P
Sbjct: 219 TKVD-------PKYLMKIEHNLNSRCETPRIHREELMRYVHRP 254
Score = 90.5 bits (223), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 167/426 (39%), Gaps = 92/426 (21%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L PSIMH++E L+A +L + A +++ A++ +E + +R+E LGD
Sbjct: 951 LTPSIMHKVEIYLIAEQLNKTI---LKPVAFTDLSLVVTAISASVAREATNYQRIEFLGD 1007
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ L + EG L+R + N V+N L A L +I F
Sbjct: 1008 SILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYAAVETGLDKFIL------VDVF 1061
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ PR E S+ G ++ KT+ADVVEAL+GA
Sbjct: 1062 TGAKWRPRYNKVHLE----SEEQGIPQREMTT-------------KTLADVVEALLGAAT 1104
Query: 1168 DDSG----FKAATAFL---KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLG 1220
+ G K FL +W+ A + N + + S +E LLG
Sbjct: 1105 IEGGETKTEKCLEIFLPEIRWMPFDDRINA--LYNSVPEAYENIRTSW---FQEIESLLG 1159
Query: 1221 HQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+ F + L+QAF HPS YQRLEF+GDA+LD++I +L++ L + +
Sbjct: 1160 YSFNKKVFLVQAFTHPSNPGSTTSSYQRLEFVGDAILDHIIVHHLFNSSRNLPHFDMHLM 1219
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV------KEGP 1333
R+ L N A + + S SE + + +T +TR+V + G
Sbjct: 1220 RTALANADFLAFLCIGMS-------TEQARSEVVESSKKNTVTSLTTRKVFLWQYMRHGT 1272
Query: 1334 ----------------------------------------RCPKVLGDLVESSLGAILLD 1353
R K DL+ES LGAI +D
Sbjct: 1273 SWELAAAQQQTADQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAIFID 1332
Query: 1354 SGFNLN 1359
S +L+
Sbjct: 1333 SHGSLD 1338
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
++ RSG+ NLLVAT V EEG+D+ C LV+ FD + SFIQ RGRAR +S++ +
Sbjct: 475 IDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFVIFL 534
Query: 537 DSGNQRE-------LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY-KVDSSGACIS 588
+ ++ + D++K+ +E+ R I + + +E Y +++ +GA ++
Sbjct: 535 NGDDKSQEKKWNKMEDVMKSMYEEDMRRLENIWAIENIEEEADEKENEYLRIEPTGALLT 594
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTIC-HIILPA--NAPIHQIVGTPQ 644
L +C+ L D F + +P F Y + + GG + +ILP + I G+
Sbjct: 595 FENARPHLEHFCATLQCD-FTDTRPVFLYSESEPGGMVTGKVILPNVLDPKFRVIRGSKW 653
Query: 645 SSME-AAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
E A++DA +A L++ G +ND LLP ED + +S S
Sbjct: 654 WRRERMAQRDAAFQAYVKLYREGLVNDNLLPIHWMPVEDPALEYSEKRPS 703
>gi|448330470|ref|ZP_21519751.1| Hef nuclease [Natrinema versiforme JCM 10478]
gi|445611517|gb|ELY65266.1| Hef nuclease [Natrinema versiforme JCM 10478]
Length = 815
Score = 102 bits (253), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 230/562 (40%), Gaps = 77/562 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE V++ PQ++ L I
Sbjct: 80 QHADFYREALQILDEEIVVFTGDVSPDDRAAMWESAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 136 LADVTHITFDECHRA--TGDYAYNYIAERYHAD--AKQPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D++ F V + D + + L E+
Sbjct: 188 EVCENL--GLDEVEVMTEEDA-DVDEFTHDTDVEWERI-----DLPEEVLEIRDALNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 240 KERLEKLKELGVASSTQPDQSQKDLNRMRAELQELINNDQSEGFEGMSIHAEVMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICR-RDGIASDLSCIEV 399
R + E +++ +L R+ AS+AS+ + R R+ + S E+
Sbjct: 296 --RQAVTLVETQSVE-ALRRYFERQRNQARSSGASKASQRMVSDPRVREAMRKAESFDEI 352
Query: 400 LKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
P +SK + L T L+ + IVF TA AL+ L S+ V
Sbjct: 353 --HPKYSKARMLLA---ETLGLEGGDRVIVFTESRDTAEALTDFLSE-----SFDAKRFV 402
Query: 460 GVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G G M++ + +L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 403 GQGDREGSDGMTQKQQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIR 462
Query: 518 FIQSRGR-------------ARMPQSEYAFLVDSGNQRELD-LIKNFSKEEDRMNREIMD 563
IQ +GR A + E F + ++E++ ++ D + E+ D
Sbjct: 463 SIQRKGRTGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMENELRELKGMADELAEELDD 522
Query: 564 RTSSDAFTCSEERIYKVDSSGA 585
S A E KVD +G
Sbjct: 523 SQQSLADFGDGESGVKVDGNGG 544
>gi|448337408|ref|ZP_21526486.1| Hef nuclease [Natrinema pallidum DSM 3751]
gi|445625583|gb|ELY78939.1| Hef nuclease [Natrinema pallidum DSM 3751]
Length = 815
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 209/489 (42%), Gaps = 67/489 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGRALMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPDDRAATWESAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 136 LADVTHVTFDECHRA--TGDYAYNYIAERYHAD--AKRPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPVINDTSSSYVTCSEQLA 293
N + + +V + EDA D++ F V R+ V+ + + +E+L
Sbjct: 188 EVCENL--GIDEVEVMTEEDA-DVDEFTHDTEVEWERIDLPDEVLEIRDALHEVITERLE 244
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLS 349
++K + S D + K LNR+ ++ + N G ++HA + L
Sbjct: 245 KLKE---LGVASSTQPDQ-----SQKDLNRMRAELQTLINNDQSEGFEGMSIHAEVMKL- 295
Query: 350 GDETMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASDLSCI 397
R + E +++ +L R+ AS+AS+ + R + +
Sbjct: 296 -----RQAVTLVETQSVE-ALRRYFERQRNQARTSGASKASQRMVSDPR---VREAMRKA 346
Query: 398 EVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
E E + R++ + T L+ + IVF TA AL+ L + S+
Sbjct: 347 ESFDEIHPKYRRARVL-LAETLGLEGGERVIVFTESRDTAEALTDFLSD-----SFDTKR 400
Query: 458 LVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
VG G M++ +++L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 401 FVGQGDREGSDGMTQKQQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTA 460
Query: 516 ASFIQSRGR 524
IQ +GR
Sbjct: 461 IRSIQRKGR 469
>gi|197098648|ref|NP_001124599.1| probable ATP-dependent RNA helicase DHX58 [Pongo abelii]
gi|55725102|emb|CAH89418.1| hypothetical protein [Pongo abelii]
Length = 678
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 218/514 (42%), Gaps = 56/514 (10%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A Y + + L V LV
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAA---YVAKRHLETVDGGKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----HRF 174
Q + + + T S + + +++L+ ++L L
Sbjct: 61 TQHGEEFRRMLDGRW-TMTTLSGDMGPRAGFGHLARCHDLLICTAELLQMALTSPEEEEH 119
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKGAS 231
+++ +L++ DECHH + Y IM + + + + +P++ G+TASP G GAS
Sbjct: 120 LELTAFSLIVVDECHHTH--KDTVYNVIMSQYLELKLQRAQPLPQVLGLTASPGTG-GAS 176
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESF-VSSPVVRVYQYGPVINDTSSSYVTCSE 290
L +IN + L +L+++ + SP Y P + + S C +
Sbjct: 177 ---KLNGAINHVLQL----------CANLDTWCIMSP----QNYCPQLQEHSQQ--PCKQ 217
Query: 291 QLAEIKREQ-----YISALSRKLHDHQSLRNTTKQL-NRLHDSMKFCLENLGVCGAL--- 341
+R Q + L ++HDH + ++ ++++ L L
Sbjct: 218 YNLCHRRSQDPFGDLLKKLMDQIHDHLEMPELSRNFGTQMYEQQVVKLSEAAALAGLQEQ 277
Query: 342 --HASYILLSGDETMRNELIEAEGN--TIDDSLCRFASQASEVFAAICRRDGIASDLSCI 397
+A ++ D + ++ + A + D R +++ A R + D +
Sbjct: 278 RVYALHLRRYNDALLIHDTVRAVDALAALQDFYHREHVTKTQILCAKRRLLALFDDHKNV 337
Query: 398 --EVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-- 452
+ + KL L IL FR + I+F +A +L LQ L +
Sbjct: 338 LAHLATHGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVD 397
Query: 453 WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
R L+G +S M++ + ++ KFR G LNLLVAT V EEGLDI C +V+R+
Sbjct: 398 IRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPHCNVVVRYG 457
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
L S +Q+RGRAR QS Y+F+ G+ REL
Sbjct: 458 LLTNEISMVQARGRARADQSVYSFVATEGS-REL 490
>gi|448342391|ref|ZP_21531342.1| Hef nuclease [Natrinema gari JCM 14663]
gi|445625768|gb|ELY79122.1| Hef nuclease [Natrinema gari JCM 14663]
Length = 819
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 204/488 (41%), Gaps = 65/488 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE V++ PQ++ L I
Sbjct: 80 QHADFYREALQLSDEEIVVFTGDVSPDDRAATWESAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 136 LADVTHATFDECHRA--TGDYAYNYIAERYHAD--AKRPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D++ F V + D + + + L E+
Sbjct: 188 EVCENL--GIDEVEVMTEEDA-DVDEFTHDTEVEWERI-----DLPDAVLEIRDALNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 240 KERLEKLKELGVASSTQPDQSQKDLNRMRAELQTLINNDQSEGFEGMSIHAEVMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASDLSCIEVL 400
R + E +++ +L R+ AS+AS+ + R + + E
Sbjct: 296 --RQAVTLVETQSVE-ALRRYFERQRNQARTSGASKASQRMVSDPR---VREAMRKAERF 349
Query: 401 KE--PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
E P +SK + L T L+ + IVF TA AL+ L S+
Sbjct: 350 DEIHPKYSKARMLLA---ETLGLEGGERVIVFTESRDTAEALTDFLSE-----SFDTKRF 401
Query: 459 VGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VG G M++ +++L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 402 VGQGDRDGSDGMTQTQQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 461
Query: 517 SFIQSRGR 524
IQ +GR
Sbjct: 462 RSIQRKGR 469
>gi|433592991|ref|YP_007282487.1| ERCC4-like helicase [Natrinema pellirubrum DSM 15624]
gi|448335437|ref|ZP_21524582.1| Hef nuclease [Natrinema pellirubrum DSM 15624]
gi|433307771|gb|AGB33583.1| ERCC4-like helicase [Natrinema pellirubrum DSM 15624]
gi|445616961|gb|ELY70569.1| Hef nuclease [Natrinema pellirubrum DSM 15624]
Length = 813
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 229/555 (41%), Gaps = 63/555 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 26 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 81
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE +++ PQ++ L I
Sbjct: 82 QHADFYREALQIPDEEIVVFTGDVSPDDRAEMWESAT----IVMATPQVIENDLVGSRIS 137
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 138 LADVTHVTFDECHRA--TGDYAYNYIAERYHAD--AKRPLVTGMSASP----GGDEEAIL 189
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D++ F V + D + + + L E+
Sbjct: 190 EVCENL--GIDEVEVMTEEDA-DVDEFTHETDVEWERI-----DLPEAVLEIRDALNEVI 241
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 242 TERLEKLKELGVASSTQPDQSQKDLNRMRAELQELINNDQSEGFEGMSIHAEVMKLRQAV 301
Query: 353 TM-RNELIEAEGNTID----DSLCRFASQASEVFAAICR-RDGIASDLSCIEVLKEPFFS 406
T+ + +EA D + AS+AS+ + R R+ + S E+ P +
Sbjct: 302 TLVETQSVEAVRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAESFDEI--HPKYR 359
Query: 407 KKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN--AG 464
K + L T L+ + IVF TA AL+ L + S+ VG G
Sbjct: 360 KTRMLLA---ETLGLEGGERVIVFTESRDTAEALTDFLSD-----SFDAKRFVGQGDREG 411
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
M++ + +L++FR+GE +LV+T V EEGLD+ LV+ ++ T IQ +GR
Sbjct: 412 SDGMTQTEQQDVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGR 471
Query: 525 -------------ARMPQSEYAFLVDSGNQRELDL-IKNFSKEEDRMNREIMDRTSSDAF 570
A + E F + ++E++ +++ D + E+ D S A
Sbjct: 472 TGRQSEGRVVVLMAEDTRDEAYFWISRRREKEMESELRDLKGMADELAEELDDSQQSLAD 531
Query: 571 TCSEERIYKVDSSGA 585
ER KV+ G
Sbjct: 532 FGDGERTAKVNDDGG 546
>gi|295670335|ref|XP_002795715.1| RNase3 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284800|gb|EEH40366.1| RNase3 domain-containing protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1346
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 191/458 (41%), Gaps = 100/458 (21%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP++RA+ L RLR L +R E + E Y P L+I + P
Sbjct: 836 QPVVRAE-LVRLRRNLLDRTTEQEKGVETAYYICPEP-----LRISALPAPVAVFAFTFP 889
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFS---------- 1038
+++ R+E+ L+A+E + L + + E+ L+ALT ++ +E +
Sbjct: 890 AMISRIESYLIALEACNKLQLT------IIPELALEALTKDSDNTEEHRAEQIHFQRGMG 943
Query: 1039 --LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGD FLK + LF ++ DE + +R + N NL A + ++
Sbjct: 944 KNYERLEFLGDCFLKMSTSISLFAMNADNDEFDFHVKRMCLICNQNLFNTAMSLGIYEFV 1003
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R Q F ++ G + L A+ K+IA
Sbjct: 1004 RTQGFSRRNWYPEGIKL-----------------------LQAD------------KSIA 1028
Query: 1157 DVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS- 1207
D+ EAL+GA + D+ KA TAF+ QV S V +
Sbjct: 1029 DICEALIGASLLSGGRVHRFDTAVKAVTAFVNSENHQVSDWQSYVGLYSLPRYQITEADD 1088
Query: 1208 ASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSY 1263
LD+A + LG++F + LL AF H S+ + CYQRLEFLGD++LD + +
Sbjct: 1089 TQLDLAQQIGDRLGYRFKYPRLLSSAFTHASYPTVWSKVPCYQRLEFLGDSLLDMVCVEH 1148
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITP 1323
LY YP P LT+ ++ F+N + +K + L +I+
Sbjct: 1149 LYHKYPDRDPQWLTE-------HKVFSN-HLKMRGWKLKL---QRLKASIHQTF------ 1191
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
G R P L +++E+ +GAI +DS F+ V
Sbjct: 1192 --------GQR-PVTLRNMLEAYIGAIFVDSNFSFEVV 1220
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 199/499 (39%), Gaps = 95/499 (19%)
Query: 200 AKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDA 257
A I ++FY + P+IFGMTASPV A+ ++ ++ SLE LLD+++ + +
Sbjct: 171 ANIDQNFYLQMTESQHRPKIFGMTASPV-----DAKVDVVTAVKSLEMLLDSQIATTSNW 225
Query: 258 EDLESFVSSPVVRVYQYG---PVINDTSSSYVTCSEQLAEIK--REQYISALSRKLHDHQ 312
+ L V+ P + + Y P + Y + Q I ++ +I +L
Sbjct: 226 DALRQSVARPTEQQWVYDRLDPAFE--TDLYKSMHSQFGNISVLKKMFICSL-------- 275
Query: 313 SLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTID--DSL 370
T L R +C + L S L G + R + + GN D +
Sbjct: 276 ---EATSTLGR------WCSDWLWTIVLDEPSLPKLEGSIS-RRYMRTSSGNHTKGVDEM 325
Query: 371 CRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILST-FRLQQHMKCIV 429
+ +A +V + + ++C E L S K+ L LS F KCIV
Sbjct: 326 IKSLREAVKVI----KDHTFYTPVNCPEHL-----SPKVRLLHHQLSKYFERHTDTKCIV 376
Query: 430 FVNRIVTARALSYILQNLKFLASWRCHFLVGVN---AGLKSMSRNAMKSILEKFRSGELN 486
FV + +AR L + + R L+GV AG + +S L KFR GELN
Sbjct: 377 FVEKRHSARLLGELFSRIG-TRHMRTGVLIGVRPDEAGGEKVSFRQQFLTLLKFRKGELN 435
Query: 487 LLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL 546
L A + + L Q C +D + E ++
Sbjct: 436 CLYAHMMERDNLIHQRC--------------------------------LDEVQEAE-NI 462
Query: 547 IKNF--SKEEDRMNREIMDRTSSDAFTCSEER--IYKVDSSGACISAGYGVSLLHRYCSK 602
++ F S EDR+ R D D F E R + V S+G+ ++ +++L Y S
Sbjct: 463 MRQFCESLPEDRIIRGTSDEL--DKFLDKERRRKTFTVSSTGSKLTYNSALAVLAHYASS 520
Query: 603 L--------PHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDA 654
L ++ + + ++ G +C ++LP +P+ + G P + +AK+ A
Sbjct: 521 LHMVANGIQQYENEMSTRVNYFIHRIRGAFVCEVVLPEKSPVRGLTGRPAVAKLSAKQSA 580
Query: 655 CLKAIEDLHKLGALNDYLL 673
+ L K G L+DY L
Sbjct: 581 AFETCLILRKNGLLDDYFL 599
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQLEL +KA NII L TG GKT IAVLL+ ELA R I FL +
Sbjct: 99 REYQLELFEKAKTTNIIAVLDTGSGKTLIAVLLLKHMIRIELADRARGKPPRISFFLVDS 158
Query: 115 VALVQQQAKVIEESI 129
VALV QQA V++ +I
Sbjct: 159 VALVYQQAAVLKANI 173
>gi|47226371|emb|CAG09339.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1038
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 68/543 (12%)
Query: 43 ESSVGAQKTDKDPKQIA-RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHL- 99
E + G + D++ + I YQ+E+ + A+E ENII+ L TG GKT +AV + + HL
Sbjct: 301 EGNDGTRAGDEESEDIDLWDYQMEVARPALEGENIIICLPTGRGKTRVAVYVAKK--HLE 358
Query: 100 IRKPQKSI--CIFLAPTVALVQQQAKVIEESIGF-----KVRTFCGGSKRLKSHCDWEKE 152
RK + I + L + LV+Q E + F KV G S+ S D
Sbjct: 359 SRKAKGKIGKVVVLVNQIPLVEQHYAT--EFLPFLKHTYKVERVSGDSQLKISFTD---T 413
Query: 153 IDQYEVLVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQ------------VK 194
+ + +V++ QIL L + + ++L++ DECHH Q +
Sbjct: 414 VRKNDVIICTAQILENYLERSRTGEDEGVNLSDLSLIVIDECHHTQKGGVYNQIMVRYLM 473
Query: 195 SNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
H K+ K+ KP +P+I G+TASP VG + + NL +++ ++
Sbjct: 474 QKHKNIKLRKE-QKP-TAPLPQILGLTASPGVGSATKMAKAVEHILRICANLDASRIMTL 531
Query: 255 EDAEDLESFVSSPVVRVYQ-----YGPVINDT-----SSSYVTCSEQLAEIKREQYISAL 304
E L+ V+ V +G VI + +++ + L EQ++ +
Sbjct: 532 PPGE-LKRDSKKDVIPVEDRKQDPFGNVIKKLMNTIHNHAHLRPNSDLGSQTYEQWVVQM 590
Query: 305 SRK--LHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAE 362
R+ L +R + L + ++ + + AL +++ +E M+ + E
Sbjct: 591 EREAALAGDHKVRACAEHLRQYNEGLGLS-NTFRMWDAL--NFLSKYHEEEMKKKTAPDE 647
Query: 363 GNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRL-IGILSTFRL 421
+ I + +E F ++ +L + E + +K L +L +L F
Sbjct: 648 EHVIQIT-------DTERFLFNLFKE-YKEELQTLANNPE-YENKSLSKLKTKVLQEFST 698
Query: 422 QQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKSIL 477
+ + I+F A AL+ +I +N KF + +++G + +K M+ K +L
Sbjct: 699 RLDARGIIFTKTRRGAIALTQWIRENSKFADMDVKPAYVIGGGDQSVVKPMTAAEQKDVL 758
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
KFR+GE+NLL+AT V EEGLDI C VIR+ S IQ+ GR R S Y +VD
Sbjct: 759 NKFRNGEVNLLIATSVAEEGLDIPKCNFVIRYGHVANEISMIQTEGRGRAEDSSYT-VVD 817
Query: 538 SGN 540
N
Sbjct: 818 VKN 820
>gi|339264092|ref|XP_003366828.1| endoribonuclease Dicer [Trichinella spiralis]
gi|316961980|gb|EFV48479.1| endoribonuclease Dicer [Trichinella spiralis]
Length = 325
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL----GGCYQRLEFLGDAVLDYLITSY 1263
+ D+ + E +G++F ++ L+QA H +N + Y+RLEFLGDA+LDYLI+ +
Sbjct: 59 TAYDLNSFEAKIGYRFTNKAYLIQALTHSLYNEVETPVTDSYERLEFLGDAILDYLISRH 118
Query: 1264 LYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD-YMI- 1321
LYS PG L+DLR+ LVNN A S + + L E++N + + YM+
Sbjct: 119 LYSSKRIRSPGLLSDLRAALVNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMME 178
Query: 1322 -----TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL-DPILK- 1374
T E E PK LGD+ ES GAI LDS +L TVW++ + + + I K
Sbjct: 179 EEQDDDEKETSEFAEHVEVPKPLGDIFESVAGAIFLDSHCSLATVWQVYYNMIAEEIGKQ 238
Query: 1375 ---FSNLQ-------LNPIRELLEL 1389
F++ ++P+R LLEL
Sbjct: 239 RSDFTSFNKCLCHPPISPVRHLLEL 263
>gi|257386865|ref|YP_003176638.1| Hef nuclease [Halomicrobium mukohataei DSM 12286]
gi|257169172|gb|ACV46931.1| helicase domain protein [Halomicrobium mukohataei DSM 12286]
Length = 851
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 229/524 (43%), Gaps = 63/524 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ EL A+ ++ +V L TG GKT +++L+ A I+ Q + LAPT LVQ
Sbjct: 28 RRYQRELADTALADHTLVCLPTGLGKTTVSLLVT---AERIQDAQWK-SLLLAPTKPLVQ 83
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ E++ ++ F G + K WE V++ PQ++ L I
Sbjct: 84 QHAEFYREALQVPDDEIVVFTGEVRPAKRSDLWED----ARVVIATPQVVENDLVGNRIS 139
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + +++ P + M+ASP G + L
Sbjct: 140 LANVTHCTFDECHRA--TGDYAYNYIAERYHED--ASDPLVTAMSASP----GGDEEEIL 191
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPV--VRVYQYGPVINDTSSSYVTCSEQLAE 294
N L + V + +DA+ E + + R+ VI + S++LA+
Sbjct: 192 TVCENL--GLREVAVMTEDDADVAEHTHDTELEWKRIELPETVIEIRDAINEVVSDRLAQ 249
Query: 295 IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETM 354
+K S + + +++ ++ + ++N G ++ LL+ +
Sbjct: 250 LKELGVTSTTQPDVSE--------REIQKIQGKLSELMDNDQSEG--YSGMSLLAEVRKL 299
Query: 355 RNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLSCIEVLKE------ 402
R + AE +++ +L R+ A+++S A R + SD + +E +++
Sbjct: 300 RTAVTYAETQSVE-ALRRYFERQKEAARSSGASKADQR---LVSDPTVMEAMRKAENFTD 355
Query: 403 --PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
P F + + L T ++ + IVF TA L+ L + + VG
Sbjct: 356 LHPKFRRTRMLLA---ETLGIENGERVIVFTESRDTAETLTDFLSD-----HFETEKFVG 407
Query: 461 VN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+ G + M++ + L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 408 QSDTEGSEGMTQTQQQETLDRFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRS 467
Query: 519 IQSRGR-ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
IQ +GR R + L+ + E K+ ++E RM E+
Sbjct: 468 IQRKGRTGRQTEGRVVVLLAEDTRDEAYFWKS-RQDEQRMEDEL 510
>gi|409723155|ref|ZP_11270483.1| Hef nuclease [Halococcus hamelinensis 100A6]
gi|448722439|ref|ZP_21704974.1| Hef nuclease [Halococcus hamelinensis 100A6]
gi|445789439|gb|EMA40124.1| Hef nuclease [Halococcus hamelinensis 100A6]
Length = 827
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 208/498 (41%), Gaps = 85/498 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+EL + A + +V L TG GKT +++L+ L + LAPT LV
Sbjct: 24 RRYQVELARSAASGHTLVCLPTGLGKTTVSLLVTA--GRL--DEAGGTSLLLAPTKPLVT 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ +V F G WE+ V++ PQ++ L I
Sbjct: 80 QHAAFYREALTIPDDEVAVFTGEVSPDDRAALWER----ARVVIATPQVVENDLIGGRID 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ L FDECH A N+ Y I + ++ + P + GM+ASP G +
Sbjct: 136 LSDTTHLTFDECHRA--SGNYAYNYIAERYHAD--AERPLVTGMSASP----GGDEEG-- 185
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
+S+ L V + EDA+ V QY D VT E++ I
Sbjct: 186 IRSVCENLGLASVAVMTEEDAD------------VAQY-THNTDVEWERVTLPEEILAI- 231
Query: 297 REQYISALSRKLHDHQSL---RNTT-----KQLNRLHDSMKFCLENLGVCG----ALHAS 344
R ++ + +L + L R T+ + LNR+ ++ ++N G ++HA
Sbjct: 232 RNSLVAVIEDRLERLKELGVTRTTSADVSQRDLNRMRGELRKLMDNDQSEGYEGMSVHAE 291
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRF------ASQASEVFAAICRRDGIASDLSCIE 398
+ L R + AE +++ SL R+ A+++S A R + SD E
Sbjct: 292 VMKL------RRAVTLAETQSVE-SLRRYFERQRNAARSSGASKASQR---LVSDPKVRE 341
Query: 399 VLKE--------PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL----QN 446
+++ P F + + L L ++ + IVF TA L+ L +
Sbjct: 342 AMEQAEGYDDLHPKFRRTRILLAQCLG---IEGGERVIVFTESRDTAETLTEFLGAHFET 398
Query: 447 LKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
KF+ G G M++ + L+ FR+GE +LV+T V EEGLD+ LV
Sbjct: 399 RKFVGQ-------GDKEGSDGMTQTEQQETLDAFRAGEFEVLVSTSVAEEGLDVPEVDLV 451
Query: 507 IRFDLPETVASFIQSRGR 524
+ ++ T IQ +GR
Sbjct: 452 LFYEPVPTAIRSIQRKGR 469
>gi|410108626|gb|AFP73448.2| retinoic acid inducible protein 1, partial [Anser anser]
Length = 672
Score = 100 bits (250), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 230/520 (44%), Gaps = 60/520 (11%)
Query: 81 TGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGS 140
TG GKT +A+L+ + +K +FLA V + +QQ V ++ + + G S
Sbjct: 7 TGSGKTFVALLVCEHHFQNMPAGRKGKVVFLATKVPVYEQQKNVFKQHFERRGYSIQGVS 66
Query: 141 KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH-RFIKMELIALLIFDECHHAQVKSNHPY 199
S+ E I+ +++V+ PQIL+ + + L+IFDECH+ NHPY
Sbjct: 67 GENFSNVSVENVIEDNDIIVLTPQILVNSFEDGTLTSLSVFTLMIFDECHNTT--GNHPY 124
Query: 200 AKIMKDF----YKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV- 254
+M + + ++ +I G+TAS VG + + + + I SL + LD + S
Sbjct: 125 NVLMTRYLEQKFNSPASQLSQILGLTASVGVGNAKNIEETI-EHICSLCSYLDIQAISTV 183
Query: 255 -EDAEDLESFVSSPVV-------RVYQYGPVINDTSSSYVTCSEQLA-EIKREQYISALS 305
E+ +DL+ F++ P + RV+ + VI S ++ +E L +I +S S
Sbjct: 184 RENIQDLQRFMNKPEIDVRLVKRRVHNHFAVI---ISDLMSETEALMRKIYSVGTVSQNS 240
Query: 306 RK-----LHDHQSLRNTTK-QLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELI 359
RK ++H + K +L +L D E +C AL +I + LI
Sbjct: 241 RKDFGTQKYEHWIVVTQRKCRLLQLEDKE----EESRICRAL---FICTEHLRKYNDALI 293
Query: 360 EAEGNTIDDSLCRFASQASEVFAAICRRDG----IASDLSCIEVLKEPFFSK-------- 407
+E I D+L S +E F + ++G + L+ KEP +
Sbjct: 294 ISEDAPIIDAL----SYLTEFFTNV--KNGPYTELEQHLTAKFQEKEPELTALSKDETNE 347
Query: 408 --KLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
KL L IL +R + ++F AL ++ L+ + L+G
Sbjct: 348 NPKLEELACILDDAYRYNPQTRTLLFAKTRALVAALKKCMEENPILSYIKPDVLMGRGRR 407
Query: 465 LKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
+ M+ + K +L+ F+ S + LL+AT V +EG+DI C LV+ ++ V IQ
Sbjct: 408 DQKTGMTLPSQKGVLDAFKTSKDSRLLIATSVADEGIDIAQCNLVVLYEYSGNVTKMIQV 467
Query: 522 RGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
RGR R S+ LV S + + N KEE MN+ I
Sbjct: 468 RGRGRAAGSK-CILVTSKTEVVENEKCNRYKEE-AMNKAI 505
>gi|327272183|ref|XP_003220865.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Anolis
carolinensis]
Length = 680
Score = 100 bits (249), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 155/619 (25%), Positives = 267/619 (43%), Gaps = 78/619 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ E+ + A+E +NII++L TG GKT A + HL + + + + L V LV
Sbjct: 4 REYQWEVIEPALEGKNIIIWLPTGAGKTRAAAYVCKR--HLESRAKSKVAV-LVNMVPLV 60
Query: 119 QQQAKVIEESI---GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR-- 173
Q K E S F + G S + D + + +++ +IL L +
Sbjct: 61 DQHIKN-EFSFLKNRFNIEAISGDSIQKMIFSDV---VKKNNLIICTAKILQNALDSQDE 116
Query: 174 --FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM---KVPRIFGMTASPVVGK 228
+++ +LL+ DECHH ++ Y KIM+ + + + +P+I G+TAS G
Sbjct: 117 DVHVELTDFSLLVIDECHHTHKETT--YNKIMQHYLEHKLKGQKNLPQILGLTASLGTGG 174
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSPVVRVYQYGPVINDTSSSYVT 287
+S + + NL K+ S E + L++ + P + P + D +
Sbjct: 175 ASSLEGAQDHILQICANLDTEKIMSSEKYKFYLDTRIPQPKKQYDLSDPRLRDPFGQQLK 234
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHA---S 344
+ EI + +LS D S + ++ L + K + + VC ALH +
Sbjct: 235 MI--MTEICTYLDLPSLST---DFGSQTFEQQVVDLLKEGAKEFCQKIRVC-ALHLRKYN 288
Query: 345 YILLSGDETMRNELIEA-----EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
LL D T+R +I+A E +++++ A I R+ A L+ E
Sbjct: 289 DALLIND-TVR--MIDAFNALDEFYKLENAMKVLHHPAERHLVEIFGRNR-AELLALAE- 343
Query: 400 LKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
+ + + KL +L +L F+ + + IVF +A +L LQ+ + L
Sbjct: 344 -DKSYENPKLEKLQQVLQDQFQELKSSRGIVFTRTRQSAHSLHQWLQDNRALCELGIKAA 402
Query: 459 VGVNAG----LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
V AG +K M++ +++++ FR G LNLL +T V EEGLD+ C +V+R+ L
Sbjct: 403 VLTGAGYSNQIKHMTQQEQQNVIQNFRKGALNLLFSTSVAEEGLDVPECNIVVRYGLMTN 462
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI------------- 561
+ +Q+RGRAR P S + L + N +E+ K E M R I
Sbjct: 463 EIAMMQARGRARAPNSICSVLAKT-NSKEVSREKLNEDLESLMERAIKRVQQMPQHEYCM 521
Query: 562 -MDRTSSDAFTCSEERIYKVDSSGA----------CISAGYGVSLLH----RYCSKLPHD 606
+++ +A C R+ + + C++ V++ H R K+ H
Sbjct: 522 KIEKLQLEAVACHRVRVAEREQRHQLHDPDSVRLYCLNC--NVAVCHGSDLRKIEKMHHV 579
Query: 607 EFFNPKPKFYYFDDLGGTI 625
NP +FYY G +
Sbjct: 580 N-INPNFRFYYRKSFGDVV 597
>gi|448381161|ref|ZP_21561428.1| Hef nuclease [Haloterrigena thermotolerans DSM 11522]
gi|445663513|gb|ELZ16261.1| Hef nuclease [Haloterrigena thermotolerans DSM 11522]
Length = 815
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 206/488 (42%), Gaps = 65/488 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 26 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKALMLAPTKPLVQ 81
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE V++ PQ++ L I
Sbjct: 82 QHADFYREALQIPDKEIVVFTGDVSPDDRAEMWESAT----VVMATPQVIENDLVGSRIS 137
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 138 LADVTHVTFDECHRA--TGDYAYNYIAERYHAD--AKRPLVTGMSASP----GGDEEAIL 189
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D++ F D + E + EI
Sbjct: 190 EVCENL--GIDEVEVMTEEDA-DVDEFTHE------------TDVEWERIDLPEDVLEI- 233
Query: 297 REQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLENLGVCG----ALHAS 344
R+ ++ +L + L + K LNR+ ++ + N G ++HA
Sbjct: 234 RDALNEVITERLEKLKELGVASSTQPDQSQKDLNRMRAELQELINNDQSEGFEGMSIHAE 293
Query: 345 YILLSGDETM-RNELIEAEGNTID----DSLCRFASQASEVFAAICR-RDGIASDLSCIE 398
+ L T+ + +EA D + AS+AS+ + R R+ + S E
Sbjct: 294 VMKLRQAVTLVETQSVEAVRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAESFDE 353
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
+ P + K + L T L+ + IVF TA AL+ L + S+
Sbjct: 354 I--HPKYRKTRMLLA---ETLGLEGGERVIVFTESRDTAEALTDFLSD-----SFDAKRF 403
Query: 459 VGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VG G M++ +++L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 404 VGQGDREGSDGMTQTEQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 463
Query: 517 SFIQSRGR 524
IQ +GR
Sbjct: 464 RSIQRKGR 471
>gi|385802402|ref|YP_005838802.1| ATP-dependent RNA helicase/nuclease Hef [Haloquadratum walsbyi C23]
gi|339727894|emb|CCC39004.1| ATP-dependent RNA helicase/nuclease Hef [Haloquadratum walsbyi C23]
Length = 855
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 212/493 (43%), Gaps = 75/493 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ++L A + + +V L TG GKT +++L+ + I +FLAPT LV+
Sbjct: 23 RLYQIQLAGTARKTDTLVCLPTGLGKTTVSLLVTATRLNSI----GGTALFLAPTKPLVR 78
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q + ++ + F G W D +V++ PQ++ L I
Sbjct: 79 QHVEFYRNALTIPDEDIVVFTGEVSPDDRAALW----DDAQVVIATPQVIENDLIGNRIS 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A + Y I + ++ D PR+ GM+ASP S + +
Sbjct: 135 LNSVTHLTFDECHRA--TGEYAYVYIAERYH--DDATNPRVTGMSASP-----GSDKEGI 185
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N++ + +V + +DA+ V Y Y D ++ +++ +I
Sbjct: 186 VTVCNNI-GVSAVEVMTEDDAD----------VAEYTY---TTDVEWKHIELPDEIIQI- 230
Query: 297 REQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLE---NLGVCG-ALHAS 344
R+ + +L +SL +TT KQLN++ ++ ++ + G G + HA
Sbjct: 231 RDALNDVIRDRLQQLKSLGVADTTQPDVSQKQLNQMRGKLQKLIDADNSDGYAGMSTHAE 290
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRF---------ASQASEVFAAICRRDGIASDLS 395
+ L EL+E + +S+ R+ +S AS+ + + +
Sbjct: 291 VMKLR----RAVELVETQSV---ESVRRYFERQRNAAQSSGASKASQRLIAEPKVRQSMQ 343
Query: 396 CIEVLK--EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW 453
E P FS+ R+I + T ++ + I+F TA AL+ L AS+
Sbjct: 344 LAESFDGTHPKFSRT--RII-LAQTLGIEGGERVIIFTESRDTAEALTEFLS-----ASF 395
Query: 454 RCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
VG N +S M++ + L FRSGE +LV+T V EEGLD+ LV+ F+
Sbjct: 396 DVQRFVGQNDTGRSEGMTQREQQKALTAFRSGEFEVLVSTSVAEEGLDVPEVDLVLFFEP 455
Query: 512 PETVASFIQSRGR 524
T IQ +GR
Sbjct: 456 VPTAIRSIQRKGR 468
>gi|397772195|ref|YP_006539741.1| helicase domain protein [Natrinema sp. J7-2]
gi|397681288|gb|AFO55665.1| helicase domain protein [Natrinema sp. J7-2]
Length = 857
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 205/488 (42%), Gaps = 65/488 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 62 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 117
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE V++ PQ++ L I
Sbjct: 118 QHADFYREALQLPDEEIVVFTGDVSPDDRAATWESAT----VVMATPQVIENDLVGSRIS 173
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ K P + GM+ASP G +A L
Sbjct: 174 LADVTHVTFDECHRA--TGDYAYNYIAERYHVD--AKRPLVTGMSASP----GGDEEAIL 225
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D++ F V + + + + + L E+
Sbjct: 226 EVCENL--GIDEVEVMTEEDA-DVDEFTHDTEVEWERI-----ELPDAVLEIRDALNEVI 277
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LNR+ ++ + N G ++HA + L
Sbjct: 278 KERLEKLKELGVASSTQPDQSQKDLNRMRAELQTLINNDQSEGFEGMSIHAEVMKL---- 333
Query: 353 TMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASDLSCIEVL 400
R + E +++ +L R+ AS+AS+ + R + + E
Sbjct: 334 --RQAVTLVETQSVE-ALRRYFERQRNQARTSGASKASQRMVSDPR---VREAMRKAERF 387
Query: 401 KE--PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
E P +SK + L T L+ + IVF TA AL+ L S+
Sbjct: 388 DEIHPKYSKARMLLA---ETLGLEGGERVIVFTESRDTAEALTDFLSE-----SFDTKRF 439
Query: 459 VGVNA--GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
VG G M++ +++L++FR+GE +LV+T V EEGLD+ LV+ ++ T
Sbjct: 440 VGQGDRDGSDGMTQTQQQAVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAI 499
Query: 517 SFIQSRGR 524
IQ +GR
Sbjct: 500 RSIQRKGR 507
>gi|109115463|ref|XP_001108799.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 1
[Macaca mulatta]
gi|355568695|gb|EHH24976.1| Putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
Length = 678
Score = 100 bits (248), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 220/518 (42%), Gaps = 64/518 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A Y + + + L V LV
Sbjct: 4 RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAA---YVAKRHLETVDGAKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q + + + V T G + + +++L+ ++L L
Sbjct: 61 TQHGEEFRRMLDGRWTVTTLSGD---MGPRAGFGHLARCHDLLICTAELLQMALTSPEEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +L++ DECHH + Y IM + + + + +P++ G+TASP G
Sbjct: 118 EHVELTAFSLIVVDECHHTH--KDTVYNVIMSRYLELKLQRARPLPQVLGLTASP----G 171
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESF-VSSPVVRVYQYGPVINDTSSSYVTC 288
+ L +I+ + L +L+++ + SP Y P + + S C
Sbjct: 172 TGGASKLDGAIDHVLQL----------CANLDTWCIMSP----QNYRPRLQEHSQQ--PC 215
Query: 289 SEQLAEIKREQ-----YISALSRKLHDHQSLRNTTKQL-NRLHDSMKFCLENLGVCGAL- 341
+ +R Q + L ++HDH + ++ ++++ L L
Sbjct: 216 KQYNLCHRRSQDPFGDLLKKLMDQVHDHLEMPELSRNFGTQMYEQQVVKLSEAAALAGLQ 275
Query: 342 ----HASYILLSGDETMRNELIEAEGN--TIDDSLCRFASQASEVFAAICRR----DGIA 391
+A ++ D + ++ + A + D R +++ A R DG
Sbjct: 276 EQRVYALHLRRYNDALLIHDTVRAVDALAALQDFYHREHVTKTQILCAERRLLALFDGHK 335
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILS-TFRLQQHMKCIVFVNRIVTARALSYILQNLKFL 450
+ L+ + + KL L IL FR + I+F +A +L LQ L
Sbjct: 336 NVLAHLATHGPE--NPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGL 393
Query: 451 AS--WRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLV 506
+ R L+G +S M++ + ++ KFR G LNLLVAT V EEGLDI C +V
Sbjct: 394 QTVDIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVV 453
Query: 507 IRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
+R+ L S +Q+RGRAR QS Y+F+ G+ REL
Sbjct: 454 VRYGLLTNEISMVQARGRARADQSVYSFVATEGS-REL 490
>gi|429191672|ref|YP_007177350.1| ERCC4-like helicase [Natronobacterium gregoryi SP2]
gi|448325183|ref|ZP_21514580.1| Hef nuclease [Natronobacterium gregoryi SP2]
gi|429135890|gb|AFZ72901.1| ERCC4-like helicase [Natronobacterium gregoryi SP2]
gi|445616172|gb|ELY69802.1| Hef nuclease [Natronobacterium gregoryi SP2]
Length = 803
Score = 100 bits (248), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 203/483 (42%), Gaps = 55/483 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAADHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ V++ PQ++ L +
Sbjct: 80 QHADFYREALQIPDEQIVVFTGDVSPEDRAATWEEAT----VVMATPQVIENDLVGSRVS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ K P + GM+ASP G + L
Sbjct: 136 LADVTHCTFDECHRA--TGDYAYNYIAERYHAD--AKQPLVTGMSASP----GGDEETIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D+ F V + D + + L ++
Sbjct: 188 EVCENL--GIEEVEVMTEEDA-DVSEFTHDTDVEWERI-----DLPEEVLEIRDALNDVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+++ + D + K+LN + ++ + N G ++HA + L
Sbjct: 240 KDRLEKLKEMGIADSTQPDQSQKELNAMRAELQKLINNDQSEGFEGMSIHAEVMKLRQAV 299
Query: 353 TM-RNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKE--------P 403
T+ + +EA D R +++S A R + SD E +++ P
Sbjct: 300 TLVETQSVEAVRRYFDRQ--RNQARSSGASKASQR---LVSDPRVREAMRKGEEFDQLHP 354
Query: 404 FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN- 462
+ K R+I + T L+ + IVF TA AL+ L S+ VG
Sbjct: 355 KYRKT--RMI-LAETLGLEDGERVIVFTESRDTAEALTDFLSE-----SFEAKRFVGQGD 406
Query: 463 -AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQS 521
G M++N + +L+ FR+GE +L++T V EEGLD+ LV+ ++ T IQ
Sbjct: 407 REGSDGMTQNEQQEVLDDFRAGEFEVLISTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQR 466
Query: 522 RGR 524
+GR
Sbjct: 467 KGR 469
>gi|297794783|ref|XP_002865276.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
gi|297311111|gb|EFH41535.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
lyrata]
Length = 892
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 29/305 (9%)
Query: 1205 PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYL 1264
PL S + +E +L + F+++ LL + H +QRL F+G+ L T +L
Sbjct: 343 PLMDSDSVEAVEKILNYSFVNKNLLNELLTH----NTSPLFQRLMFVGEPALSLAFTKHL 398
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM---- 1320
Y YPKL+P L+ LR N +A VAV + Y+F+I + I +++D M
Sbjct: 399 YLTYPKLEPKDLSLLRDANACNDRYARVAVKKGIYQFIISNVEKPERMILDFIDMMGKED 458
Query: 1321 -ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQ 1379
P R VK PK+L +LV + GA+ +D +N+ +W+I +PI +L+
Sbjct: 459 DPDPDPYRVVK----APKILANLVAAVAGAVYIDVNYNVQRLWEIFRGLFEPIYTLDDLR 514
Query: 1380 LNPIRELLELCNSYD-----LDLQFPSLKKGGKFLAEAKVTGKDKDVFI-SACATNLSRK 1433
+ P L L D +D ++ + K +A+ + D+FI S C+ +
Sbjct: 515 MQPKPPFLMLFRLADKHGKRIDFRYSKVDGSRKNIAQVYL----DDMFIASGCSKRIDT- 569
Query: 1434 EAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEK 1493
A +A+++ KL + K +++ + L+ E P+ D+ E+
Sbjct: 570 -AKLLAAEEALQKLSECMLIEKIIHQDNLEAEIQTGSSSLLTASENPL----TDEMTKEQ 624
Query: 1494 LKISE 1498
+ I E
Sbjct: 625 MVIDE 629
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
+E +L + F ++ LL A S + RLEF GD+VL+ T+Y+ YP LK
Sbjct: 7 VEKILNYSFTNKTLLKDAITQRS-----TLFDRLEFFGDSVLEVAFTNYIRHTYPNLKVK 61
Query: 1275 QLTDLRSMLVNNQAFANVA 1293
+L DLR+ V+N+ FA VA
Sbjct: 62 ELCDLRTANVSNEKFARVA 80
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 46/260 (17%)
Query: 1361 VWKIMLSFLDPILKFSNLQLNPIRELLELCNSYD-----LDLQFPSLKKGGKFLAEAKVT 1415
+ +I S L+PI +LQ+ P L L D +D ++ + +AE
Sbjct: 82 ILQIFRSLLEPIYTPEDLQMQPKPPFLTLFRLTDKHGKRIDFRYSKDDDSKQHIAEDSPH 141
Query: 1416 GKDKDV----FISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEA 1471
+ +DV F+ NL QL ++L + T S S+ + E
Sbjct: 142 VEPEDVKGKSFVICSTGNL-----------QLQTELSSLS----TASENSLADEMTQEE- 185
Query: 1472 RLIGYDETPINVVAAD--DNVFE-----KLKISEPQGGSSCDIGSPSLTTGGL------- 1517
+ +DE +V D +FE KL+I Q GSS + + +TT +
Sbjct: 186 --MVFDEDSPDVEPEDVKGKLFEICYTRKLQI---QTGSSANPLTYEMTTKQMVVDKDSL 240
Query: 1518 --QNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEP 1575
+ R +L E+C N W P F +E G + + F V +EI E G+
Sbjct: 241 HVEPTDGRGKLIEICTKNKWPRPIFSVEEERGPKNEQKFVCSVKIEIPNIEGSFHMKGDA 300
Query: 1576 QAKKKGAAEHAAEGMLWCLE 1595
++KKK A +A M+ LE
Sbjct: 301 KSKKKQAENSSAYHMIRALE 320
>gi|336252885|ref|YP_004595992.1| helicase domain-containing protein [Halopiger xanaduensis SH-6]
gi|335336874|gb|AEH36113.1| helicase domain-containing protein [Halopiger xanaduensis SH-6]
Length = 831
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 202/482 (41%), Gaps = 53/482 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLRLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G W++ V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPDDRAETWQEAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + +++ K P + GM+ASP G +A L
Sbjct: 136 LAEVTHITFDECHRA--TGDYAYNYIAERYHED--AKKPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D+ F V + D + + L E+
Sbjct: 188 EVCENL--GLEEVEVMTEEDA-DVSEFTHDTDVEWERI-----DLPDEVLEIRDTLNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K LN++ ++ + N G ++HA + L
Sbjct: 240 KERLEKLKELGIASSTQPDQSQKDLNKMRAELQQLINNDQSEGFEGMSIHAEVMKLRQAV 299
Query: 353 TM-RNELIEAEGNTID----DSLCRFASQASEVFAAICR-RDGI--ASDLSCIEVLKEPF 404
T+ + +EA D + AS+AS+ + R R+ + A D I P
Sbjct: 300 TLVETQSVEAVRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAEDFDEIH----PK 355
Query: 405 FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN-- 462
+ K + L T L+ + IVF TA AL+ L S+ VG
Sbjct: 356 YRKTRMLLA---ETLGLEGGERVIVFTESRDTAEALTDFLSE-----SFDAKRFVGQGDR 407
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
G M++ + +L++FR+GE +LV+T V EEGLD+ LV+ ++ T IQ +
Sbjct: 408 EGSDGMTQTEQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRK 467
Query: 523 GR 524
GR
Sbjct: 468 GR 469
>gi|301773535|ref|XP_002922173.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like
[Ailuropoda melanoleuca]
gi|281344530|gb|EFB20114.1| hypothetical protein PANDA_011148 [Ailuropoda melanoleuca]
Length = 684
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 121/515 (23%), Positives = 217/515 (42%), Gaps = 58/515 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ A+E +NII++L TG GKT A Y + + + L V LV
Sbjct: 4 RPYQWEVIMPALEGKNIIMWLPTGAGKTRAAA---YVAKRHLETVDGAKVVVLVNRVHLV 60
Query: 119 QQQAKVIEESIG--FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLY----H 172
Q + + + + T G + + +++++ ++L L
Sbjct: 61 SQHCEEFSRMLDNRWAITTLSGD---MGPRAGFGHLARSHDLIICTAELLQLALASPEEE 117
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMTASPVVGKG 229
+++ +LL+ DECHH + Y I+ + + + + +P++ G+TASP G
Sbjct: 118 EHVELHAFSLLVVDECHHTH--KDTVYNVILSQYLQHKLQRTRPLPQVLGLTASPGTGGA 175
Query: 230 ASAQANLPKSINSLENLLDAKVYSVED-AEDLESFVSSPVVR--------VYQYGPVIND 280
++ + + + NL ++ S + L+ P + + +G +
Sbjct: 176 STLEGAVDHILQLCANLDTWRIVSPQTYRRHLQEHSPQPCKQYNLCHRRSLDPFGDTLKK 235
Query: 281 TSSSYVTC------SEQLAEIKREQYISALSRKLHDH--QSLRNTTKQLNRLHDSMKFCL 332
C S+ EQ + LS+ + Q R L R +D++
Sbjct: 236 LMDRIHDCLKMPELSQDYGTQNYEQQVVELSQAAAEAGLQQRRVCALHLRRYNDAL-LVH 294
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEV-FAAICRRDGIA 391
+ + AL + + T + ++++AE L F +E+ A C +
Sbjct: 295 DTVRAVDALDSLRDFYDRERTTKTQVLQAERWL----LALFDDYKNELAHLATCSPENPK 350
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
++ ++L+E F S R GI+ T Q ++++ + LQ +
Sbjct: 351 LEM-LEQILREQFGSSDSPR--GIIFTQTRQSTHSLLLWLQQ-------QPGLQTVDI-- 398
Query: 452 SWRCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
R L+G ++ M++ + ++ KFR G LNLLVAT V EEGLDI C +V+R+
Sbjct: 399 --RADLLIGAGTSSQNTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRY 456
Query: 510 DLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
L S +Q+RGRAR QS Y+F+ + G REL
Sbjct: 457 GLLTNEISMVQARGRARAGQSIYSFVANQGG-REL 490
>gi|297836192|ref|XP_002885978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331818|gb|EFH62237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 18/196 (9%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC---YQRLEFLGDAVLDYLITSYLYSVY 1268
+ +E +L + F + LL +A S + ++RLEFLGD+VL + ++++ Y
Sbjct: 4 VEAVEKILNYTFTDKNLLKEAITKTSGSNTESSSLLFERLEFLGDSVLLVVFSNHIEITY 63
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS-----NVLSETINNYVDYMI-- 1321
P L P L D+R V+N+ FA VAV+ + ++F+IFD+ + +S + N +++
Sbjct: 64 PNLHPNDLNDVRIANVSNETFARVAVNNNLHQFIIFDAPNPLLHKMSHVLTNKWCHVLKI 123
Query: 1322 ---TPSSTREVKEGP-----RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
+ + EV P + PK L DLVE+ GA+ +D F++ VW+I ++PI
Sbjct: 124 KDFSEAVKEEVYPAPCGGLVKAPKFLADLVEAIAGAVYIDVDFDVQRVWEIFRVLVEPIC 183
Query: 1374 KFSNLQLNPIRELLEL 1389
+L+ P R L L
Sbjct: 184 TLDDLRKQPERTYLRL 199
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 167/405 (41%), Gaps = 78/405 (19%)
Query: 1201 KSFLPLSASLD---MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLD 1257
+S LS+ +D + +E +L + F ++ LL +A H S N L +QRL F+G A +
Sbjct: 359 RSLESLSSEIDSDPVKAVEKILNYSFTNKNLLREALTHNSSNLLP--FQRLMFVGKAGIS 416
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYV 1317
+++Y YPKL P +LT L++ N +A VAV + Y+FL + I ++
Sbjct: 417 LAFANHMYLTYPKLGPKELTMLQNANTCNDRYARVAVKRGIYQFLKCNVRTSKRQIIEFI 476
Query: 1318 DYM---ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
+ P R VK PK+L DLVES GA+ +D ++ +W+I+ +PI
Sbjct: 477 KMLGKEDDPDPFRSVK----APKILTDLVESVAGAVYIDVNRDVKRLWEILRGLFEPIYT 532
Query: 1375 FSNLQLNPIRELLELCNSYD----LDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNL 1430
+++ P L C Y ++ ++ +K + EA +T D AC +
Sbjct: 533 LDDIRRKPHPLLTLFCLGYKHGKRIEFRYRECEKSSG-MNEATITEVYVDDKFIACGKSC 591
Query: 1431 SRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNV 1490
+R SK++AA T +LE + +S PI +V D
Sbjct: 592 NRAA----------SKMRAA-----TMALEKLSES-------------MPIELVMDDSIE 623
Query: 1491 FEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSH 1550
+E +++ L E+C W P F +
Sbjct: 624 YE----------------------------NSKKTLIEICNERKWPNPIFSVERSS---- 651
Query: 1551 LKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLE 1595
K F V +E E + G+ + K+ A +AA ++ L+
Sbjct: 652 -KRFVSSVTIETPTEEGTLYIEGDLEKGKEKAEYNAASHVVRTLK 695
>gi|390336937|ref|XP_794619.3| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
[Strongylocentrotus purpuratus]
Length = 655
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 145/586 (24%), Positives = 238/586 (40%), Gaps = 121/586 (20%)
Query: 60 RKYQLELCKKAMEE-NIIVYLGTGCGKTHIAVLLIYE-LAHLIRKPQKSICIFLAPTVAL 117
R YQ EL + N I+ TG GKT A L + + L ++ ++ F+ PT L
Sbjct: 8 RHYQEELAVPGLNGYNYIICAPTGSGKTMTAASLCHRRMVELQKQGERFKATFIVPTRHL 67
Query: 118 VQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID--QYEVLVMIPQILLYCLYHRFI 175
QQ + FK + +K + + D + VL++ QIL+ L+H
Sbjct: 68 KGQQRDAFWDI--FKPTSAVAVTKT----SQFRRTFDDPRVNVLMITAQILVNALHHGHF 121
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-----------------IMKVPRIF 218
+ E +++L+FDECHH K HPY +IMK + + +P+I
Sbjct: 122 RFEELSMLVFDECHHTTQK--HPYNEIMKAYMQEKKRLIDRKTRGAWLVGLPFGGLPQIV 179
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAED------------LESFVSS 266
G+TAS +G G SA A + +N NL V +V D + L+ +S+
Sbjct: 180 GLTAS--LGTGGSADA-VKHVVNLCANLDCTGVVTVTDPSNVKELEGINRPPELDEIIST 236
Query: 267 P---------------------VVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALS 305
P + + + G + D S Y I E +I ++
Sbjct: 237 PPRAPSEISTCFLKTLKTLMVDMEKRFLIGKAVGDPSRPY-------GSILYETWIGQIA 289
Query: 306 RKLHDHQSLRNTTKQLN-RLHDSMKFCLE---NLGVCGALHASYILLSGDETMRNELIEA 361
+T +Q N L + + L+ L L A Y+L + + + +E
Sbjct: 290 ----------STAEQKNMSLFIAASYLLKLNMALQTYEDLPAGYVLHALEAFKEQKRLEF 339
Query: 362 EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILS-TFR 420
+ N + CR E++ D +A L + ++P + KL L+ L F
Sbjct: 340 DMNKAGKA-CR------EMY-----EDRVAK-LKQLARKEDPLSTPKLKELVDKLKHVFT 386
Query: 421 LQQHMKCIVFVNRIVTARAL-SYILQNLKFLAS-WRCHFLVGVNAGLKSMSRNA-MKSIL 477
+ + IV RAL +I + + S R +VG ++ A ++ L
Sbjct: 387 TIPNSRGIVLARTRFATRALYDFIGYHFGYSTSKVRPTRIVGQGKEMEDAQTAAKQEAAL 446
Query: 478 EKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 537
+FR+GE NLL+AT + +EGLD+ C +IR++ +QS+GRAR S+ LV
Sbjct: 447 NQFRTGEANLLIATDIVQEGLDVPACNFIIRYNFVSNEIGTVQSKGRARAQNSQCFLLV- 505
Query: 538 SGNQRELDLIKNFSKEEDRMN--REIMDRTSSDAFTCSEERIYKVD 581
EED +N RE +RT + ++I +D
Sbjct: 506 ---------------EEDSINEKREHQNRTRVRDMDAAIKKINTMD 536
>gi|289596778|ref|YP_003483474.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
gi|289534565|gb|ADD08912.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
Length = 756
Score = 99.4 bits (246), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 235/518 (45%), Gaps = 45/518 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R+YQ+ + K A+ N +V L TG GKT IA+L++ E+ L +K K +FLAPT LV+
Sbjct: 16 REYQVSIAKSALRGNTLVVLPTGLGKTIIAILVLVEV--LQKKGGK--ILFLAPTKPLVE 71
Query: 120 QQAKVIEESIGFK-VRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
Q A+ I++ + V G R K + +V+V PQI+ + +K+
Sbjct: 72 QHARTIKKLTKIEDVIVLTGEVSRKKRKELY----GSAKVVVATPQIIQNDIIAGELKIG 127
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPK 238
+L+IFDE H A N+ Y I K + K + I G+TASP G + K
Sbjct: 128 DFSLVIFDEAHRAV--GNYAYVYIAKKYRKSREDHL--ILGITASP----GGDEE----K 175
Query: 239 SINSLENL-LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ----LA 293
+ +ENL ++ E+ +D++ +V ++ + P+ N+ Y E +
Sbjct: 176 IMEIIENLGIENVEIRTEEDKDVKKYVKGFKIKWIEL-PMPNEIRELYGKLKELYNSIIT 234
Query: 294 EIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSM-KFCLENLGVCGALHASYILLSGDE 352
E+++ S L +K LR + D +F + + A+ Y L E
Sbjct: 235 ELRKFGLFSTL-KKPTRRDVLRAQKIVQQEIKDGKSEFYQAAMLITMAIKIDYAL----E 289
Query: 353 TMRNELIEAEGN----TIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKK 408
+ + EA N I++ + S+A+ R + IE K + K
Sbjct: 290 YLETQGFEAAYNYLLRIIEEGNSKGGSKAARTLVRDERFIEMMKIARKIEERKGDIENPK 349
Query: 409 L--LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL- 465
L LR+I I + + IVF + TA+ ++ L + + + R F+ + G
Sbjct: 350 LNALRVI-IRKELAENKDSRIIVFTHFRETAQLVANALNEVPGVRAAR--FVGQASKGED 406
Query: 466 KSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD-LPETVASFIQSRGR 524
K + + ++EKF+ GE N+LVAT V EEGLDI +VI ++ +P + S IQ RGR
Sbjct: 407 KGLRQKEQVELVEKFKKGEYNVLVATSVAEEGLDIPATDMVIFYEPVPSEIRS-IQRRGR 465
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIM 562
+ ++ R++ + + +E +M E++
Sbjct: 466 TGRARIGKVVILTIKGTRDIAYLWSSRNKEKKMKNELL 503
>gi|156359582|ref|XP_001624846.1| predicted protein [Nematostella vectensis]
gi|156211649|gb|EDO32746.1| predicted protein [Nematostella vectensis]
Length = 917
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 143/330 (43%), Gaps = 79/330 (23%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
ERLE LGDA L+ +HLF + +DEG L RS V N +L LA +L Y++
Sbjct: 537 ERLEFLGDAVLELICSKHLFFMLPDMDEGHLATFRSALVQNRHLALLAKMLDLSDYMQ-- 594
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
F+ G P +C + DDLN +A+ +
Sbjct: 595 -------FSHG---PDLCQE---------------DDLN--------------HAMANCL 615
Query: 1160 EALVGAFIDDSGFKAATAFLKWIGIQ--------VEFEASQVTNICISSKSFLPLSASL- 1210
EAL+GA ++G + AT + +E ++ + L S+ +
Sbjct: 616 EALLGAVYLEAGLQVATELFSRLAFTEQDLYDKWMELPKHRLQDQEPGGDRHLIGSSPVL 675
Query: 1211 -DMATLEILLGHQFLHRGLLLQAFVHPSF---NRLGGCYQRLEFLGDAVLDYLITSYLYS 1266
+ E G F H LL +AF HP N G QRLEFLGD+VL ++++ +LY
Sbjct: 676 QKLVEFEEGSGIPFTHIRLLARAFTHPQVGKNNLTLGDNQRLEFLGDSVLQFVVSVFLYQ 735
Query: 1267 VYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSST 1326
+P G LT LRS LVN+++ A +A + L E IN P++
Sbjct: 736 HFPDHHEGHLTLLRSSLVNSRSQAEIARQLN-----------LQEFINT------GPTNV 778
Query: 1327 REVKEGPRCPKVLGDLVESSLGAILLDSGF 1356
RE K+L D++E+ + A+ +D G
Sbjct: 779 RE--------KMLADVLEALIAAVFVDKGL 800
Score = 48.5 bits (114), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
Query: 1246 QRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFD 1305
+RLEFLGDAVL+ + + +L+ + P + G L RS LV N+ A +A K L
Sbjct: 537 ERLEFLGDAVLELICSKHLFFMLPDMDEGHLATFRSALVQNRHLALLA------KML--- 587
Query: 1306 SNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIM 1365
+++Y+ + P +E + + +E+ LGA+ L++G + T
Sbjct: 588 ------DLSDYMQFSHGPDLCQEDDLN----HAMANCLEALLGAVYLEAGLQVATELFSR 637
Query: 1366 LSFLD 1370
L+F +
Sbjct: 638 LAFTE 642
>gi|307111602|gb|EFN59836.1| hypothetical protein CHLNCDRAFT_133597 [Chlorella variabilis]
Length = 1000
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 236/552 (42%), Gaps = 110/552 (19%)
Query: 55 PKQIA-RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAP 113
PK ++ RKYQL + A+ N +V L TG GKT IA ++++ A P+ + +F+AP
Sbjct: 463 PKGVSQRKYQLACIQTALLTNTLVCLPTGLGKTLIAAVVMHNFARWF--PEGKV-VFVAP 519
Query: 114 TVALVQQQAKVIEESIGFKVRTFC---GGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
T LV QQ + +G FC GGS+ +W+ I + PQ L
Sbjct: 520 TRPLVAQQMEACHSFMGMSKSGFCEITGGSRPDARKQEWQGGIRR--AFFCTPQTFWKDL 577
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVV--GK 228
+ E + L+ DECH A + A + +K RI G++A+P K
Sbjct: 578 QNGICPYERVVCLVVDECHRATGNQDIVKAVSLMRQHKCKF----RILGLSATPGADGAK 633
Query: 229 GASAQANLPKSINSL---------------ENLLDAK------VYSVEDAEDLES----- 262
+ +A+LP+ I L E L+ + VY + L +
Sbjct: 634 VQAGRASLPRRIPLLTVAAKVTRLVMLEVIEKLMISAIEFLELVYPTRETVPLRAVLLRL 693
Query: 263 ---FVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTK 319
F++S V + YG +T SS+ + Q K + A+++ L +
Sbjct: 694 IHNFIASLVAKKEYYGNPNPETVSSHALRTSQ----KANSFNPAIAQAGLAWAGLGTCAQ 749
Query: 320 QLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASE 379
L ++ D L+ GV AL SY+ ++ + + ++ + DDS+ F S
Sbjct: 750 ALVQVRD----LLDVYGVAQAL--SYL----NQKINDNYMK---SLRDDSM--FCSFQQS 794
Query: 380 VFAAICRRDGIASD--LSCIEVLKEPFFSK-----KLLRLIGILSTFR---------LQQ 423
+ AA+ R+G +S + +++L++ F ++ R+I + + FR LQ
Sbjct: 795 LEAAV--RNGGSSPKLIKLVQILRQHFSAQGGEEGASGRVI-VFTNFRDGVAEIRAALQA 851
Query: 424 HMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSG 483
H ++TAR S+I Q+ + G A M++ K +L+ FRSG
Sbjct: 852 H-------EPLITAR--SFIGQSNSGKSR-------GGKASGGGMTQKEQKEVLKGFRSG 895
Query: 484 ELNLLVATKVGEEGLDI-QTCC----------LVIRFDLPETVASFIQSRGR-ARMPQSE 531
N LVAT +GEEGLDI Q C L++ +D + Q GR R +
Sbjct: 896 AFNCLVATCIGEEGLDIPQASCHKDACLAGVDLIVCYDATSSPTRSTQRMGRTGRHKEGR 955
Query: 532 YAFLVDSGNQRE 543
+++ +G +++
Sbjct: 956 VVYILAAGREQD 967
>gi|294463153|gb|ADE77113.1| unknown [Picea sitchensis]
Length = 173
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 12/147 (8%)
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
++ LE +L ++F + LL +A H S N Y++LEF+GD+VL YL+T +LY YPKL
Sbjct: 19 LSELEDILKYKFKSKSLLKEAITHSSNNNTES-YEKLEFVGDSVLGYLVTKHLYCAYPKL 77
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
G LT LRS V+ + FA V V F+++L+ ++ L + I ++V + +
Sbjct: 78 YQGTLTLLRSRNVDTEKFARVCVKHKFHQYLLLNAPALQQIIEDFV------KDIEDESK 131
Query: 1332 GPRC-----PKVLGDLVESSLGAILLD 1353
RC PKVL D+VES GA+ +D
Sbjct: 132 SFRCGDFKPPKVLADIVESIAGAVFVD 158
Score = 42.4 bits (98), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 1004 ELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHD 1063
EL+ +L F S +L +A+T S E+LE +GD+ L Y V +HL+ +
Sbjct: 21 ELEDILKYKFK-----SKSLLKEAITHSSNNNTESYEKLEFVGDSVLGYLVTKHLYCAYP 75
Query: 1064 TVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
+ +G LT RS V+ ++ ++ Y+
Sbjct: 76 KLYQGTLTLLRSRNVDTEKFARVCVKHKFHQYL 108
>gi|110666996|ref|YP_656807.1| Hef nuclease [Haloquadratum walsbyi DSM 16790]
gi|109624743|emb|CAJ51150.1| ATP-dependent RNA helicase/nuclease Hef [Haloquadratum walsbyi DSM
16790]
Length = 851
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 210/493 (42%), Gaps = 75/493 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ++L A + + +V L TG GKT +++L+ + I +FLAPT LV+
Sbjct: 23 RLYQIQLAGTARKTDTLVCLPTGLGKTTVSLLVTATRLNSI----GGTALFLAPTKPLVR 78
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q + ++ + F G W D +V++ PQ++ L I
Sbjct: 79 QHIEFYRNALTIPDEDIVVFTGEVSPDDRAALW----DDAQVVIATPQVIENDLIGNRIS 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A + Y I + ++ D PR+ GM+ASP S + +
Sbjct: 135 LNSVTHLTFDECHRA--TGEYAYVYIAERYH--DDATNPRVTGMSASP-----GSDKEGI 185
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N++ + +V + +DA+ V Y Y D ++ +++ +I
Sbjct: 186 VTVCNNI-GVSAVEVMTEDDAD----------VAEYTY---TTDVEWKHIELPDEIIQI- 230
Query: 297 REQYISALSRKLHDHQSL--RNTT------KQLNRLHDSMKFCLE---NLGVCG-ALHAS 344
R+ + +L +SL +TT KQLN++ ++ ++ + G G + HA
Sbjct: 231 RDALNDVIRDRLQQLKSLGVADTTQPDVSQKQLNQMRGKLQKLIDADNSDGYAGMSTHAE 290
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRF---------ASQASEVFAAICRRDGIASDLS 395
+ L EL+E + +S+ R+ +S AS+ + + +
Sbjct: 291 VMKLR----RAVELVETQSV---ESVRRYFERQRNAAQSSGASKASQRLIAEPKVRQSMQ 343
Query: 396 CIEVLK--EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASW 453
E P FS+ + L T ++ + I+F TA AL+ L AS+
Sbjct: 344 LAESFDGTHPKFSRTRILL---AQTLGIEGGERVIIFTESRDTAEALTEFLS-----ASF 395
Query: 454 RCHFLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
VG N +S M++ + L FRSGE +L++T V EEGLD+ LV+ F+
Sbjct: 396 DVQRFVGQNDTGRSEGMTQREQQKALTAFRSGEFEVLISTSVAEEGLDVPEVDLVLFFEP 455
Query: 512 PETVASFIQSRGR 524
T IQ +GR
Sbjct: 456 VPTAIRSIQRKGR 468
>gi|154150356|ref|YP_001403974.1| Hef nuclease [Methanoregula boonei 6A8]
gi|153998908|gb|ABS55331.1| helicase domain protein [Methanoregula boonei 6A8]
Length = 745
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 230/568 (40%), Gaps = 116/568 (20%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
+R+YQL + KA++ N +V L TG GKT IA+L+ + L + K + LAPT LV
Sbjct: 16 SREYQLGIAMKALDANTMVILPTGLGKTAIALLV--AASRLYNEGGK--VLMLAPTKPLV 71
Query: 119 QQQAKVIEESIGFKVRT---------FCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
+Q + E+ + K T F G + + +WE+ +V+ PQ++
Sbjct: 72 EQHLRFFEKYLIAKSPTAPDACQFAMFTGEAPPTERTAEWERS----QVIFATPQVVKND 127
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L ++ +ALLI DECH A N+ Y + + ++ D P + MTASP G
Sbjct: 128 LIAGRYTLQDVALLIVDECHRA--VGNYAYVFLARRYH--DTAAKPLLLAMTASP----G 179
Query: 230 ASAQ------ANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSS 283
S + ANL I +EN E+ D+ +V V V+Q
Sbjct: 180 GSQEKVSDVCANL--GIAHVEN-------RTENDPDVSPYVHEREVEVHQI--------- 221
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSL------------RNTTKQLNRLHDSMKFC 331
+ AE+K I A+ + D L R + K+L ++ ++
Sbjct: 222 ------DLPAELK--SAIHAIHTLIDDRLGLLASLGFAVPKRDRLSMKELAGINAQIQQR 273
Query: 332 LENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAA-----ICR 386
++N G AS + AE + ++ SQ SEVF +
Sbjct: 274 IQNRDPAGYSAAS--------------VYAECLKLKHAVTLAESQGSEVFKGYIAKLVAE 319
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLI-----------GILSTFRLQ----QHMKCIVFV 431
G + + ++P F R I +L + Q + I+F
Sbjct: 320 GRGSGGSKASQRLSRDPAFHSLYERTISWAGELHPKPAAVLGIVKEQIDTHPDSRIIIFA 379
Query: 432 N-RIVTARALSYILQNLKFLASWRCHFLVG--VNAGLKSMSRNAMKSILEKFRSGELNLL 488
R + Y+ +N C VG K +S+ + L +FR+GE +L
Sbjct: 380 TFRDTVQLLVDYLTKN-----GISCERFVGQATKDAEKGLSQKRQIAALARFRAGEFKVL 434
Query: 489 VATKVGEEGLDIQTCCLVIRFD-LPETVASFIQSRGR-ARMPQSEYAFLVDSGNQRELDL 546
VAT VGEEGLD+ + LVI ++ +P + S IQ +GR R L G D+
Sbjct: 435 VATSVGEEGLDVPSTDLVIFYEPVPSEIRS-IQRKGRTGRSGAGRVVVLATKGTSD--DV 491
Query: 547 IKNFSKEEDRMNREIMDRTSSDAFTCSE 574
+ S+ ++R ++ + + S T +
Sbjct: 492 YRYVSQTKERQMQKNLRQMSGQDITAQQ 519
>gi|330802362|ref|XP_003289187.1| hypothetical protein DICPUDRAFT_79950 [Dictyostelium purpureum]
gi|325080763|gb|EGC34305.1| hypothetical protein DICPUDRAFT_79950 [Dictyostelium purpureum]
Length = 1059
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 163/407 (40%), Gaps = 93/407 (22%)
Query: 961 EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI--------MHRLENLLVAIELKHLLSAS 1012
+YF P ++ L I F IG L++LP + + +V+++ +L +
Sbjct: 699 KYFQKNPLDVRSLGIPSFIHSIGK-LAILPFYSEINWCVRLAQFNTRIVSLKSYKILREA 757
Query: 1013 FPEGAEVSAEMLLKALTTEKCQERFSL----ERLEILGDAFLKYAVGRHLFLLHDTVDEG 1068
F + ++ L+ ++ + +RLE LGD+ LK A +LF + EG
Sbjct: 758 FTHPSTKASNRLIPPSELPMFKDYYPYLGDNQRLEYLGDSVLKLASSIYLFYKYSGSKEG 817
Query: 1069 ELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQ 1128
L+ R+N + N NL++++ R +L +R
Sbjct: 818 ALSMERANNIKNDNLIEVSKRMHLDEILR------------------------------- 846
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
L+ K H ADV+EAL GA D GF+ A I ++ F
Sbjct: 847 --------LSNSDEIKKPH--------ADVIEALFGAISLDRGFEKAYE----IIVRYVF 886
Query: 1189 EASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRL 1248
S V + + S S D+ TL L + H LL +AF + YQRL
Sbjct: 887 NDSNVR-LPLYQSSMEETVLSHDLRTLLFNLDLRIDHPSLLEEAFSSGT----NVNYQRL 941
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV 1308
EF+GD VLDY+ YLY +P+ G LT+ RS LV N ++ + K L N+
Sbjct: 942 EFVGDGVLDYITADYLYKEFPEYNEGTLTEFRSRLVRNNNLSDAS------KRLKLPPNI 995
Query: 1309 LSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
E + PK LGD ES +G ++LD G
Sbjct: 996 TDE------------------ERAALPPKRLGDYFESLVGCLVLDRG 1024
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 43/147 (29%)
Query: 1228 LLLQAFVHPSF---NRLG---------------GCYQRLEFLGDAVLDYLITSYLYSVYP 1269
+L +AF HPS NRL G QRLE+LGD+VL + YL+ Y
Sbjct: 753 ILREAFTHPSTKASNRLIPPSELPMFKDYYPYLGDNQRLEYLGDSVLKLASSIYLFYKYS 812
Query: 1270 KLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV 1329
K G L+ R+ + N N++ + ++D ++ S++ E+
Sbjct: 813 GSKEGALSMERANNIKN-------------------DNLIEVSKRMHLDEILRLSNSDEI 853
Query: 1330 KEGPRCPKVLGDLVESSLGAILLDSGF 1356
K K D++E+ GAI LD GF
Sbjct: 854 K------KPHADVIEALFGAISLDRGF 874
>gi|449550734|gb|EMD41698.1| hypothetical protein CERSUDRAFT_128720 [Ceriporiopsis subvermispora
B]
Length = 1302
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 217/529 (41%), Gaps = 74/529 (13%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVA 116
Q R YQ + K + EN +V L TG GKT IA +++ P+ + +F+APT
Sbjct: 225 QPKRDYQFNIVKHCLFENTLVSLPTGLGKTFIAGVVMLNFYTWF--PEGKV-VFVAPTKP 281
Query: 117 LVQQQAKVIEESIGFK---VRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
LV QQ + G G + R+K W D+ V M PQ L+ L
Sbjct: 282 LVAQQIDACHRTCGIPGSHAAELTGETSRIKRSGLW----DEKRVFYMTPQTLMSDLTSD 337
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVP--RIFGMTASPVVGKGAS 231
I LL+ DE H ++ YA++++ + K P R+ +TA+P G +
Sbjct: 338 NCDPGRIVLLVIDEAHKGS--GDYAYAQVVRFM----MAKNPHFRVLALTATP-GGNPEA 390
Query: 232 AQANLPKSINSL---------ENLLDAKVY---------------SVEDAEDLESFVSSP 267
QA +++L E +D Y + +DL + V P
Sbjct: 391 VQA----IVDALHISHVEIRDEKSMDLHSYMHKKHIQQHCIKLSDELNKIKDLLAAVMQP 446
Query: 268 VVRVYQYGPVINDTSSS---YVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRL 324
+++ Q ++++ +S + C + EIK ++ LS L+ Q L L
Sbjct: 447 MIKQLQSNGILHNAEASTLHHFRCRTGMGEIKTKRAPPYLSGFLNRLQPLARAMSYL--F 504
Query: 325 HDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
SM+ C ALH + +GD + + N+ F + SEV +
Sbjct: 505 EASMEMCYT------ALHD---IATGDS-------DPKKNSATQKEKAFQTLMSEVRSMK 548
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLL----RLIGILSTFRLQQHMKCIVFVN-RIVTARA 439
R + + ++ L F+K++L R G + + + IVFV+ R
Sbjct: 549 QRGFPLHPKMEKLQELLVQHFAKEMLDKDERTPGQQAADSAAES-RAIVFVSFRQCVDEV 607
Query: 440 LSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+ + + + + R G K ++ I+ KF++GE N+LV+T +GEEGLD
Sbjct: 608 VELLSHHNPLIRATRFIGQGTDTKGRKGHTQKEQLEIINKFKTGEFNVLVSTSIGEEGLD 667
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIK 548
I L++ +D +T +Q GR + Y ++ + + E + K
Sbjct: 668 IGEVDLIVCYDAQKTPIRMLQRVGRTGRKKDGYVHVLLAQGREEHNWAK 716
>gi|405973602|gb|EKC38304.1| Interferon-induced helicase C domain-containing protein 1
[Crassostrea gigas]
Length = 1260
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 126/258 (48%), Gaps = 31/258 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R YQ+EL + ++E +N ++ TG GKTH+A+ +I I+ + IFL AL
Sbjct: 494 RSYQMELARPSLEGKNSVIVAPTGSGKTHVALYIIKHHMESIKSIRHPKVIFLVEQSALA 553
Query: 119 QQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKME 178
+QQ K + KV+ G S+R E + ++LV+ QILL L + +
Sbjct: 554 EQQGKQCTTYLPCKVKVITGESQR--------NERMKRDLLVVTAQILLNALRDGIVSVT 605
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK------VPRIFGMTASPVVGKGASA 232
+L++FDECHH NH Y IM + + +P I GMTAS VGK A+
Sbjct: 606 DFSLMVFDECHHTN--DNHSYNMIMNRYLDIKLQDRERAKTLPMIVGMTASVGVGK-ATE 662
Query: 233 QANLPKSINSLENLLDAK--VYSVEDAEDLESFVSSPVVRVYQ--------YGPVIN--- 279
K I + +DA+ V E+ +L+ +V+ P ++Y+ +G +++
Sbjct: 663 DTKAKKHIEKVLANMDAEMIVTVTENIMELKKYVNIPKQKLYKVTKREKDHFGTLLHKLM 722
Query: 280 DTSSSYVTCSEQLAEIKR 297
D + Y+ S+ L ++++
Sbjct: 723 DATEKYMKNSKYLEQVRK 740
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 419 FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSI 476
F+ + IVFV +A+ ++ + L VGV A +S M++ I
Sbjct: 944 FKENPDARVIVFVKTRELVKAIETYMKETEELRILNPIQFVGVQANKESGGMTKVEQDEI 1003
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
LE F+ G +++AT V EEGLDIQ C LV+R+D + +QSRGR R S+Y L
Sbjct: 1004 LELFKEGNHKVIIATSVAEEGLDIQKCSLVVRYDHVTNEIAMVQSRGRGRAEDSKYVVLA 1063
Query: 537 --DSGN--QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYG 592
DS + EL+ ++ E+ MNR I +R ++ T E + +V
Sbjct: 1064 SEDSNTIKKEELNQMR-----ENMMNRAI-ERVRAELSTDKEAVLRRVREIQQAEKVARD 1117
Query: 593 VSLLHRYCSKLPHDEF 608
++L +R ++ EF
Sbjct: 1118 IALKNRKAAQANLGEF 1133
>gi|145540581|ref|XP_001455980.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834199|emb|CAI44479.1| Dicer-like ribonuclease with helicase and Rnase III domains
[Paramecium tetraurelia]
gi|124423789|emb|CAK88583.1| unnamed protein product [Paramecium tetraurelia]
Length = 1797
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 185/428 (43%), Gaps = 83/428 (19%)
Query: 1018 EVSAEMLLKALTTEKCQE--RFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
++ E+L K +++ + + + + LE LGDA LK +F+ +E L R+
Sbjct: 1301 DIDNELLHKCFQSQQFNQDDQTNYQVLEFLGDANLKLLSSIEVFVQFPFANEHLLHLERA 1360
Query: 1076 NAVNNSNLLKLAARNNLQVYIRDQPFD--PCQFFALGRRCPRICSKETERTIHSQYDGRA 1133
V+N NL K + + I+ FD P +F L + + + E+ ++ + +
Sbjct: 1361 RIVSNENLRKFSIIHRFFNCIKCTNFDYSPPEFL-LDKNTQELSEIQPEKQKENKENTKY 1419
Query: 1134 PDDLNAEV--RCSKGHHWLHKKTIADVVEALVGAFI--DDSGFKAATAFLKWIGIQVEFE 1189
N EV K + + +K +DVVEAL GAF+ D A FL IG+ +++
Sbjct: 1420 QYTQNGEVITELPKNYQPIPEKVHSDVVEALNGAFLIQYDEDINACQFFLHRIGV-LKYP 1478
Query: 1190 ASQV---TNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF-------- 1238
+QV + + +K L ++ +LE ++G++F + +L+QA H SF
Sbjct: 1479 LAQVKLKNSTTLQAKGLL----QKNLNSLENIIGYKFNDQSILIQAITHQSFLSVLDFYN 1534
Query: 1239 ----------------------------------------NRLGGCYQRLEFLGDAVLDY 1258
NR+ Y+RLEFLGD+VLD
Sbjct: 1535 YRKCKCNFVEFQNTKNILQISNLNQNDINESLLTQLNQQQNRIDMSYERLEFLGDSVLDS 1594
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS------------ 1306
++ +L + K K L + +V N+A A V + +FL+ +
Sbjct: 1595 VVVEWLVKEFNKEKVEDLALKKQCVVCNKALALVTLHYKLDQFLLHPTLHKVAHENHQTL 1654
Query: 1307 NVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
N + + N Y D I+ T E P K+LGD+ ES +GAI +DS FN + +++
Sbjct: 1655 NKIKQMYNEYYD-DISKMYTSE----P-IIKILGDVFESIVGAIFVDSSFNYDLTKQVVF 1708
Query: 1367 SFLDPILK 1374
L P ++
Sbjct: 1709 KLLMPFMQ 1716
Score = 90.5 bits (223), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 53/216 (24%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVAL 117
R YQ++L +K+ E+N I++L TG GKTHIA++ IY + I+K Q + +FLA T+ L
Sbjct: 67 RDYQIDLFQKSKEKNSIIFLETGRGKTHIALMHIY---YYIKKNGFQNTKLVFLANTIQL 123
Query: 118 VQQQAKVIEESI-----------------GFKVRTFCGGSKRLKS----HCD-------- 148
V+QQ ++I + I F ++ F S + K H
Sbjct: 124 VEQQCQLIRDQIYSVAQEMEKKGLAPQDYHFDLQLFKDNSFKRKFIVPIHSKSILGIDEG 183
Query: 149 -----WEKE-----IDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHP 198
W+KE I++ VLVM+ Q+LL L ++K+ +L+IFDECHH + H
Sbjct: 184 MDIQGWKKERWDDIINESCVLVMMGQMLLNALRRGYLKLPYFSLIIFDECHHCTQR--HS 241
Query: 199 YAKIMKDFYKPDIMKVP-------RIFGMTASPVVG 227
Y I+K+F + + +K + G+TA+PV
Sbjct: 242 YRLIIKEFLECEKVKKQIQHSEKVKFLGLTATPVTS 277
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 33/236 (13%)
Query: 469 SRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP 528
+ NA K ++KF+ N+LV+T V EEG D+ C V F T+ FIQ GRAR
Sbjct: 588 TSNAQKESIKKFKES-CNILVSTNVTEEGFDVPNCHYVFIFGEITTLKQFIQKIGRARAE 646
Query: 529 QSEYAFLVDSGNQRELDLI---KNFSKEEDRMNREIMDRTSSDAFTCSEERI-------- 577
S + F++ ++EL + K K ++ + R+I + ++ ++ + RI
Sbjct: 647 GSVFYFIL--PKEKELMWMAKEKVLFKTKECVERKIEELNKNNYYSDLKNRINSLNKQIN 704
Query: 578 ----YK--------VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPK-----FYYFDD 620
+K V S A ++ + V +L Y + + E+ FY + +
Sbjct: 705 NIPKFKEEYYDCRLVKDSLALVNVNWAVEILSNYANIFKNFEYRGKDENYIRGIFYQYTE 764
Query: 621 LG--GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
G C +ILP N +G + E AK+ A KA+ L + L + L P
Sbjct: 765 FPSLGWKCVLILPKNFSDRYFIGDLMKTKEDAKRSAAFKAVLILKQKQMLTEDLRP 820
>gi|448307318|ref|ZP_21497216.1| Hef nuclease [Natronorubrum bangense JCM 10635]
gi|445595986|gb|ELY50083.1| Hef nuclease [Natronorubrum bangense JCM 10635]
Length = 810
Score = 97.4 bits (241), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 203/494 (41%), Gaps = 77/494 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A ++ +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANDHTLVCLPTGLGKTTVSLLVTARRLDEV----GGTSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G W V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPDDRAELWTDAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ ++ + FDECH A + Y + + Y D + P + GM+ASP G +A L
Sbjct: 136 LADVSHITFDECHRATGDYAYNY---IAERYHGDATQ-PLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + D +V + +DA D+ F + D + +++ EI
Sbjct: 188 EVCENL--GIQDVEVMTEDDA-DVSKFTHN------------TDVEWERIDLPDEVLEI- 231
Query: 297 REQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLENLGVCG----ALHAS 344
R+ + +L + L + K LNR+ ++ + N G ++HA
Sbjct: 232 RDTLNDVIKNRLEKLKELGVASSTQPDQSQKDLNRMRAELQGLINNDQSKGFKGMSIHAE 291
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIAS 392
+ L R + E +++ ++CR+ AS+AS+ + R
Sbjct: 292 VMKL------RQAVTLVETQSVE-AVCRYFDRQRNQARSSGASKASQRMVSDPRVREAMR 344
Query: 393 DLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS 452
+ L + ++L + T L+ + I+F TA AL+ L S
Sbjct: 345 KAESFDQLHPKYRKTRML----LAETLGLEGGERVIIFTESRDTAEALTEFLSE-----S 395
Query: 453 WRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
+ VG G M++ +++L+ FR+GE +LV+T V EEGLD+ LV+ ++
Sbjct: 396 FDAKRFVGQGDREGSDGMTQKQQQAVLDDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYE 455
Query: 511 LPETVASFIQSRGR 524
T IQ +GR
Sbjct: 456 PVPTAIRSIQRKGR 469
>gi|449468964|ref|XP_004152191.1| PREDICTED: uncharacterized protein LOC101212514 [Cucumis sativus]
gi|449528319|ref|XP_004171152.1| PREDICTED: uncharacterized protein LOC101230392 [Cucumis sativus]
Length = 227
Score = 97.4 bits (241), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1511 SLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAP-EKII 1569
S G + R+A+S L+E+C AN W+PP F+CC+EEG SH K + F+V +E++ E ++
Sbjct: 134 STKEGTPEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKVRIEMKGDCEAVV 193
Query: 1570 ECIGEPQAKKKGAAEHAAEGMLWCLEREGYLY 1601
EC G Q +KK AAEHAAEG LW L GY +
Sbjct: 194 ECYGNLQTRKKVAAEHAAEGALWYLNHLGYRF 225
>gi|259489686|tpe|CBF90161.1| TPA: RNA helicase/RNAse III, putative (AFU_orthologue;
AFUA_5G11790) [Aspergillus nidulans FGSC A4]
Length = 411
Score = 97.1 bits (240), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
Query: 107 ICIFLAPTVALVQQQAKVIEESIGFKV-RTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQI 165
I IFL +V L +QA V+ ++ V R F L S W + +++Y V+V ++
Sbjct: 42 ISIFLVDSVTLSYKQAGVLRNNLDMNVGRIFGALGFDLWSRQTWTEFLEKYMVVVCTAEV 101
Query: 166 LLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASP 224
L CL H I+ME I LL+FDE HH K +H A+I++D Y P K PR+ GMTASP
Sbjct: 102 LYQCLLHAHIRMEQINLLVFDEAHHT--KKDHVCARIIRDSYFPTAQSKRPRVLGMTASP 159
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY 274
V KG AQA + +LE LD+K+ + + V P + Y
Sbjct: 160 VDTKGDVAQAAM-----NLELYLDSKIATASQLSLVHQVVRRPKEEAWIY 204
>gi|224072687|ref|XP_002303835.1| predicted protein [Populus trichocarpa]
gi|222841267|gb|EEE78814.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 97.1 bits (240), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
Query: 1495 KISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLF 1554
+IS+ S D G P + SA+S+L E AAN WKPP F+C KEEG H KLF
Sbjct: 59 EISKDDKNSHNDSGGPKI--------SAKSQLLETLAANKWKPPLFECFKEEGPCHKKLF 110
Query: 1555 TFRVIVEIEA-PEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
T++V + IE ++EC G P+ KK AAEHAAEG LW L+ GY
Sbjct: 111 TYKVAIRIEGEASTVLECFGYPKPTKKTAAEHAAEGALWYLKHLGYF 157
>gi|425768112|gb|EKV06652.1| Dicer-like protein 2 [Penicillium digitatum Pd1]
gi|425769791|gb|EKV08273.1| Dicer-like protein 2 [Penicillium digitatum PHI26]
Length = 796
Score = 97.1 bits (240), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 41/358 (11%)
Query: 939 LFRLRNLLHNRKL---EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHR 995
L R RNLL R L ED E+ ++ + LP C + + + G + +I+ R
Sbjct: 267 LPRRRNLLQKRALNVAEDGEADAPKKSYV-LPAVACVIDKLPAKQ--GLFGLFISAILDR 323
Query: 996 LENLLVAIELKHLLSASFPEGAEV-SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAV 1054
LE LVA H L+ + +G + + + ++ A++ Q + +R E GD+ LK+ V
Sbjct: 324 LEASLVA----HRLNDTILKGVGIQNIDHVITAISAPIAQASTNYQRFEFFGDSVLKFTV 379
Query: 1055 GRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCP 1114
LF + EG L+ R V N+ L A + +I F P ++ A P
Sbjct: 380 SCQLFFRNTNWHEGYLSESRDKLVQNTRLAHAALDIGIDCFILTSRFTPRKWAA-----P 434
Query: 1115 RICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKA 1174
I +K + S + K +ADVVE+L+GA D G +
Sbjct: 435 LIRNK---------------------LEASTAKRSISTKVLADVVESLIGAAYVDGGIRK 473
Query: 1175 ATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFV 1234
A A L +++ ++++ + + S+ ++ L L+G+ F LL +A
Sbjct: 474 AQACLHRFLPEIDLFTTEISPLTLPPSK--GASSLINHHRLAGLIGYTFKDPALLTEALT 531
Query: 1235 HPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
H S ++ YQRLEFLGDAVLD ++ + + + ++ G +T L+ +VN A
Sbjct: 532 HASCEYDTSTQSYQRLEFLGDAVLDMVVMAVIAAHPVEMDQGPMTLLKHSVVNANLLA 589
Score = 48.1 bits (113), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQR EF GD+VL + ++ L+ G L++ R LV N A+ A+D F++
Sbjct: 364 YQRFEFFGDSVLKFTVSCQLFFRNTNWHEGYLSESRDKLVQNTRLAHAALDIGIDCFILT 423
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGF 1356
T + +I + KVL D+VES +GA +D G
Sbjct: 424 SRF----TPRKWAAPLIRNKLEASTAKRSISTKVLADVVESLIGAAYVDGGI 471
>gi|342879789|gb|EGU81025.1| hypothetical protein FOXB_08500 [Fusarium oxysporum Fo5176]
Length = 580
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 163/379 (43%), Gaps = 76/379 (20%)
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
+++L+A+++ +E +RLE LGD+ LK+ + H + EG L + V+N
Sbjct: 8 QLVLEAVSSPSAREPVDYQRLEFLGDSILKFCTVTQAYSEHPSWPEGLLNHFKDRLVSNE 67
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEV 1141
L ++ L +I +PF AL R PR DD+ E
Sbjct: 68 RLQRVCLEKGLSKFILSKPFT-----ALKWR-PRYL-----------------DDILKEK 104
Query: 1142 RCSKGHHWLHKKTIADVVEALVGAFIDDSGF-KAATAFLKWIGIQVEFEASQVTNICISS 1200
+ KT+ADVVEAL+GA D G KA ++G + V + +
Sbjct: 105 SAPRPAPVDGSKTLADVVEALIGASYQDGGLTKALKCISVFLGDSCNWHQEGVARDILFA 164
Query: 1201 KSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL--GGCYQRLEFLGDAVLDY 1258
+ + ++ LE L+ ++F + LL++A H S+ Y++LEFLGDA+LDY
Sbjct: 165 AAPSDVQLPSNLEPLEDLIKYKFKKKSLLIEAVTHGSYAAAMQEKSYEQLEFLGDAILDY 224
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQS--------------------- 1297
++ + ++ P + G+L +++ +VN + + V + S
Sbjct: 225 IVVTKMFQHDPPIPTGRLHMIKTAIVNGEFLSLVNLVNSIQRKDLEVRPDGELVTKTTAL 284
Query: 1298 -FYKFLIFDS----NVLSETINNYVDYMITPSSTREV----------------KEGPRCP 1336
+KF+ F+S NV+ ET + S RE+ + P+
Sbjct: 285 PLWKFMRFNSSEMANVMVETEEKF------ESMRRELVIALWGDGHYPWALLARLHPQ-- 336
Query: 1337 KVLGDLVESSLGAILLDSG 1355
K D+ E+ LGA+ +DSG
Sbjct: 337 KFYSDMFEALLGAVWVDSG 355
>gi|448354594|ref|ZP_21543350.1| Hef nuclease [Natrialba hulunbeirensis JCM 10989]
gi|445637482|gb|ELY90632.1| Hef nuclease [Natrialba hulunbeirensis JCM 10989]
Length = 833
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 204/485 (42%), Gaps = 59/485 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVTARRLDEV----GGTSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ V++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDDEIVVFTGDVSPDDRAELWEEAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A ++ Y I + ++ P + GM+ASP G +A L
Sbjct: 136 LADVTHLTFDECHRA--TGDYAYNYIAERYHTD--AADPLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPV--INDTSSSYVTCS-E 290
N L + +V + EDA D++ F V R+ V I D + +T E
Sbjct: 188 EVCENL--GLQEVEVMTEEDA-DVDEFTHDTEVEWERIDLPDEVLEIRDALNEVITDRLE 244
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYI 346
+L E+ +++ QS K LNR+ ++ + N G ++HA +
Sbjct: 245 KLKEL-------GVAKSTQPDQS----QKDLNRMRAELQQLINNDQSEGFKGMSVHAEVM 293
Query: 347 LLSGDETM-RNELIEAEGNTID----DSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
L T+ + +EA D + AS+AS+ + R + L
Sbjct: 294 KLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAESFDELH 353
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV 461
+ ++L + T L+ + IVF TA AL+ L + S+ VG
Sbjct: 354 PKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTAFLSD-----SFDAKRFVGQ 404
Query: 462 N--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
G M++ + +L++FR+ E +LV+T V EEGLD+ LV+ ++ T I
Sbjct: 405 GDREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSI 464
Query: 520 QSRGR 524
Q +GR
Sbjct: 465 QRKGR 469
>gi|435849257|ref|YP_007311507.1| ERCC4-like helicase [Natronococcus occultus SP4]
gi|433675525|gb|AGB39717.1| ERCC4-like helicase [Natronococcus occultus SP4]
Length = 814
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 202/489 (41%), Gaps = 67/489 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 26 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGTALMLAPTKPLVQ 81
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ E++ ++ F G WE V++ PQ++ L I
Sbjct: 82 QHAEFYREALQVPDDEIVVFTGDVSPDDRAALWEDAT----VVMATPQVIENDLVGSRIS 137
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ + P + GM+ASP G +A L
Sbjct: 138 LSDVTHCTFDECHRA--TGDYAYNYIAERYHAD--ARDPLVTGMSASP----GGDEEAIL 189
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D+ F D + E++ EI
Sbjct: 190 EVCENL--GLQEVEVMTEEDA-DVAEFTHD------------TDVEWERIDLPEEVLEI- 233
Query: 297 REQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLENLGVCG----ALHAS 344
R+ ++ +L + L + K LNR+ ++ ++N G ++HA
Sbjct: 234 RDALNEVITDRLETLKELGVAGSTQPDQSQKDLNRMRAELQRLIDNDQSEGFEGMSVHAE 293
Query: 345 YILLSGDETM-RNELIEAEGNTID----DSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
+ L T+ + +EA D + AS+AS+ + R + + E
Sbjct: 294 VMKLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSDPR---VREAMRRAEK 350
Query: 400 LKE--PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
E P + K + L T L+ + IVF TA AL+ L S+
Sbjct: 351 FDELHPKYRKSRMLLA---ETLGLEDGERVIVFTESRDTAEALTEFLSE-----SFDAKR 402
Query: 458 LVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
VG G M++ + +L+ FR+G+ +LV+T V EEGLD+ LV+ ++ T
Sbjct: 403 FVGQGDREGSDGMTQKEQQEVLDAFRAGKFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTA 462
Query: 516 ASFIQSRGR 524
IQ +GR
Sbjct: 463 IRSIQRKGR 471
>gi|123454959|ref|XP_001315228.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121897898|gb|EAY03005.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 955
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 220/518 (42%), Gaps = 71/518 (13%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ ++ +++EN +V + TG GKT I+ ++I + R K +FLA + LV
Sbjct: 14 RDYQFDISLASVKENTLVVIPTGLGKTFISAMVIL---NFYRWFPKGKILFLATSRPLVT 70
Query: 120 QQAKVIEESIGF---KVRTFCGGSK-RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ I + + ++ G + R++ W K V+ PQ + L
Sbjct: 71 QQMAGIRDILQIDKSEIIELTGSVEPRIRPQL-WNK----ARVIFATPQTVQKDLEKGTC 125
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
I L++ DE HHA +H Y K++ + K R+ G++A+P K
Sbjct: 126 PASQIVLVVIDEAHHA--TGDHSYCKVVSGI--AEYTKFFRVIGLSATPGSDKDIIQDVI 181
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEI 295
I+ ++ + + D+E+ V V + IN I
Sbjct: 182 YGLFISKIQYREEDEYKQYVKTRDIETVVVPNAAGVDELIARINTV-------------I 228
Query: 296 KREQYISALSR-KLHDHQSLRNTTK-QLNRLHDSMKFCLENLGVCGALHASYILLSGDET 353
KR Y+ LS+ L H TTK Q+ L MK N GV G + ++ LL E
Sbjct: 229 KR--YLQVLSKDNLVPHTDPTRTTKGQIGLL---MKNRNANEGV-GVMISTMKLLKFREY 282
Query: 354 MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI--EVLKEPFFSKKLLR 411
++N I+ T D++ F + S R + SDL I K+ K+ +
Sbjct: 283 LQNYSIK----TFVDAVTEFITDKS------TRDVDLVSDLQPILSAAQKQRQIDPKMEK 332
Query: 412 LIGILSTF-RLQQHMKCIVFVN------RIVTARALSYILQNLKFLASWRCHFLVGVNAG 464
L I+ F + + I+F N IVTA + I++ +F+ G
Sbjct: 333 LCEIVVDFLEATKESRIIIFCNFRNIVQDIVTALSSKSIVKVSEFIGQSNS-------GG 385
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
K ++++ ++++ FR G N+LVAT +GEEGLDI L+I +D+ +++ IQ GR
Sbjct: 386 TKGLNQSRQINLIQSFRRGIYNVLVATAIGEEGLDIGEVDLIICYDVQKSITRTIQRMGR 445
Query: 525 -ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREI 561
R + FL+ D KN S + + N ++
Sbjct: 446 TGRKRDGKVIFLLS-------DAQKNLSADSEHANNQV 476
>gi|448357031|ref|ZP_21545738.1| Hef nuclease [Natrialba chahannaoensis JCM 10990]
gi|445650204|gb|ELZ03130.1| Hef nuclease [Natrialba chahannaoensis JCM 10990]
Length = 835
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 203/485 (41%), Gaps = 59/485 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVTARRLDEV----GGTSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ +++ PQ++ L I
Sbjct: 80 QHADFYREALKIPDDEIVVFTGDVSPDDRAELWEEAT----IVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A + Y + + Y D P + GM+ASP G +A L
Sbjct: 136 LADVTHLTFDECHRATGDYAYNY---IAERYHADATD-PLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPV--INDTSSSYVTCS-E 290
N L + +V + EDA D++ F V R+ V I D + +T E
Sbjct: 188 EVCENL--GLQEVEVMTEEDA-DVDEFTHDTEVEWERIDLPDEVLEIRDALNEVITDRLE 244
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYI 346
+L E+ +++ QS K LNR+ ++ + N G ++HA +
Sbjct: 245 KLKEL-------GVAKSTQPDQS----QKDLNRMRAELQQLINNDQSEGFKGMSVHAEVM 293
Query: 347 LLSGDETM-RNELIEAEGNTID----DSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
L T+ + +EA D + AS+AS+ + R + L
Sbjct: 294 KLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAESFDELH 353
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV 461
+ ++L + T L+ + IVF TA AL+ L + S+ VG
Sbjct: 354 PKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTAFLSD-----SFDAKRFVGQ 404
Query: 462 N--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
G M++ + +L++FR+ E +LV+T V EEGLD+ LV+ ++ T I
Sbjct: 405 GDREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSI 464
Query: 520 QSRGR 524
Q +GR
Sbjct: 465 QRKGR 469
>gi|383620096|ref|ZP_09946502.1| Hef nuclease [Halobiforma lacisalsi AJ5]
gi|448696209|ref|ZP_21697770.1| Hef nuclease [Halobiforma lacisalsi AJ5]
gi|445783897|gb|EMA34721.1| Hef nuclease [Halobiforma lacisalsi AJ5]
Length = 828
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 198/484 (40%), Gaps = 57/484 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + + +V L TG GKT +++L+ K + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAADHHTLVCLPTGLGKTTVSLLVTARRL----KEVGGKSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ V++ PQ++ L I
Sbjct: 80 QHATFYREALQIPDEEIVVFTGDVSPDDRAATWEEAT----VVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A + Y + + Y D P + GM+ASP G +A L
Sbjct: 136 LADVTHCTFDECHRATGDYAYNY---IAERYHADATD-PLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N + + +V + EDA D+ F V + D + + L E+
Sbjct: 188 EVCENL--GIEEVEVMTEEDA-DVSEFTHETDVEWERI-----DLPEEVLEIRDALNEVI 239
Query: 297 REQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYILLSGDE 352
+E+ + + K+LN + ++ + N G ++HA + L
Sbjct: 240 KERLEKLKELGVASSTQPDQSQKELNAMRAELQKLINNDQSEGFEGMSIHAEVMKL---- 295
Query: 353 TMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDG--IASDLSCIEVLKE-------- 402
R + E +++ F Q ++ ++ + + SD E +++
Sbjct: 296 --RQAVTLVETQSVEAVRRYFERQRNQAQSSGASKASQRLVSDPRVREAMRKAEDFDQLH 353
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
P + K + L T L+ + IVF TA AL+ L S+ VG
Sbjct: 354 PKYRKTRMLLA---ETLGLEDGERVIVFTESRDTAEALTDFLSE-----SFEAKRFVGQG 405
Query: 463 --AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
G M++ + +L++FR+GE +LV+T V EEGLD+ LV+ ++ T IQ
Sbjct: 406 DREGSDGMTQTEQQEVLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQ 465
Query: 521 SRGR 524
+GR
Sbjct: 466 RKGR 469
>gi|289581647|ref|YP_003480113.1| helicase [Natrialba magadii ATCC 43099]
gi|448282943|ref|ZP_21474225.1| Hef nuclease [Natrialba magadii ATCC 43099]
gi|289531200|gb|ADD05551.1| helicase domain protein [Natrialba magadii ATCC 43099]
gi|445575558|gb|ELY30033.1| Hef nuclease [Natrialba magadii ATCC 43099]
Length = 829
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 203/485 (41%), Gaps = 59/485 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 24 RLYQLKLAGTAANGHTLVCLPTGLGKTTVSLLVTARRLDEV----GGTSLMLAPTKPLVQ 79
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A E++ ++ F G WE+ +++ PQ++ L I
Sbjct: 80 QHADFYREALQIPDEEIVVFTGDVSPDNRAELWEEAT----IVMATPQVIENDLVGSRIS 135
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + L FDECH A + Y + + Y D P + GM+ASP G +A L
Sbjct: 136 LADVTHLTFDECHRATGDYAYNY---IAERYHADATD-PLVTGMSASP----GGDEEAIL 187
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVV---RVYQYGPV--INDTSSSYVTCS-E 290
N L + +V + EDA D++ F V R+ V I D + +T E
Sbjct: 188 EVCENL--GLQEVEVMTEEDA-DVDEFTHDTEVEWERIDLPDDVLEIRDALNEVITDRLE 244
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALHASYI 346
+L E+ +++ QS K LNR+ ++ + N G ++HA +
Sbjct: 245 KLKEL-------GVAKSTQPDQS----QKDLNRMRAELQQLINNDQSEGFKGMSVHAEVM 293
Query: 347 LLSGDETM-RNELIEAEGNTID----DSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
L T+ + +EA D + AS+AS+ + R + L
Sbjct: 294 KLRQAVTLVETQSVEALRRYFDRQRNQARSSGASKASQRMVSDPRVREAMRKAESFDELH 353
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV 461
+ ++L + T L+ + IVF TA AL+ L + S+ VG
Sbjct: 354 PKYRKTRML----LAETLGLEGGERVIVFTESRDTAEALTAFLSD-----SFDAKRFVGQ 404
Query: 462 N--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
G M++ + +L++FR+ E +LV+T V EEGLD+ LV+ ++ T I
Sbjct: 405 GDREGSDGMTQKQQQEVLDEFRAAEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSI 464
Query: 520 QSRGR 524
Q +GR
Sbjct: 465 QRKGR 469
>gi|258565145|ref|XP_002583317.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907018|gb|EEP81419.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1194
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
A + L+ R+G+ NL++AT V EEG+D+ C LVI FD P+ + SFIQ RGRAR S+
Sbjct: 228 AQMTALDDLRNGKKNLIIATSVLEEGIDVPACDLVICFDFPQNLRSFIQRRGRARKKGSK 287
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERI-------YKVDSSG 584
+A VD + + +K E+ M ++ + E +++ S+G
Sbjct: 288 FALFVDIQDHAAISTLKAV---EETMKGLYLENERTLEELQLLEEAEEDGYDGFRIKSTG 344
Query: 585 ACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY-FDDLGGTICHIILPA--NAPIHQIVG 641
A ++ + L +C L E+ + +P F D+L G +ILP + + G
Sbjct: 345 ALLTLSNARNHLSHFCGILAC-EYADTEPTFMVQGDELSGLSAKVILPNFFEPRLREFRG 403
Query: 642 TPQSSME-AAKKDACLKAIEDLHKLGALNDYLLP--QEDNATED 682
E AK+DA +A L+K G +NDYL+P +N+ +D
Sbjct: 404 ISTWRTERMAKRDAAFQAYVALYKAGLVNDYLMPINHRENSADD 447
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 35/316 (11%)
Query: 988 LLPSIMHRLENLLVAIELKH--LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+P ++H +E L+A EL L F + ++L A+++ +E + +RLE L
Sbjct: 700 FIPCLIHNIEKTLIADELARTILRPVKFSD-----LSLVLTAISSSVAREASNYQRLEFL 754
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK L + EG LT R+S+ V+NS+L K A L +I +PF +
Sbjct: 755 GDSLLKLYTSIELAAKNLQWPEGLLTSRKSHVVSNSHLAKAATETGLDRFILTKPFSGAK 814
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ S T+ +H+ + +P ++ +V +ADVVEAL+GA
Sbjct: 815 WRP---------SYNTDH-VHAGDEEGSPRVMSTKV-------------LADVVEALIGA 851
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKSFLPLSASLDMATLEILLGHQFL 1224
D + LK ++ + + + + + S+ + +E LLG+ F
Sbjct: 852 ANIDGADEKTLDCLKVFLPEINWSPLDESVGLLYRNATDSGDEYSMVLPEIEELLGYTFT 911
Query: 1225 HRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
+ L+L A HPS YQRLEF+GD+VLD ++ L+ + + +R+ LV
Sbjct: 912 KKSLVLAALTHPSSTTSRHSYQRLEFIGDSVLDIIVVQALFGSPREFAHYNMHLMRTALV 971
Query: 1285 NNQAFA----NVAVDQ 1296
N A NV V++
Sbjct: 972 NADFLAFLCMNVYVEK 987
Score = 44.7 bits (104), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 1217 ILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQL 1276
IL +F L+L A + S R YQRLEFLGD++L + L + + G L
Sbjct: 721 ILRPVKFSDLSLVLTA-ISSSVAREASNYQRLEFLGDSLLKLYTSIELAAKNLQWPEGLL 779
Query: 1277 TDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS-STREVKEG--- 1332
T +S +V+N A A + +F++ + PS +T V G
Sbjct: 780 TSRKSHVVSNSHLAKAATETGLDRFIL---------TKPFSGAKWRPSYNTDHVHAGDEE 830
Query: 1333 --PRC--PKVLGDLVESSLGAILLDSG 1355
PR KVL D+VE+ +GA +D
Sbjct: 831 GSPRVMSTKVLADVVEALIGAANIDGA 857
>gi|307105763|gb|EFN54011.1| hypothetical protein CHLNCDRAFT_58365 [Chlorella variabilis]
Length = 1346
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 24/212 (11%)
Query: 57 QIARKYQLE-LCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTV 115
Q R YQ + A N+IV TG GKT IAV ++ + P + +FLAPTV
Sbjct: 681 QALRGYQQRAVTLAATGRNMIVVGDTGSGKTVIAVARAVDMT--LADP-SARTVFLAPTV 737
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHC--------DWEKEIDQYEVLVMIPQILL 167
LVQQQ V +F G+ R DW++ ++ V+VM PQ+ L
Sbjct: 738 QLVQQQTAVF-----LSYPSFSSGALRATGRTSDNPVAPRDWQRLLEDNHVVVMTPQLFL 792
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVG 227
L I+LL+ DECHHAQ ++HP K+M+ + + ++ G+TASP
Sbjct: 793 NMLNAGAAHFHQISLLVVDECHHAQ--ADHPVNKVMR--HNRSSARTTQVLGLTASPASR 848
Query: 228 KGASAQANLPKSINSLENLLDAKVYSVEDAED 259
S A L ++++ LE LDA++Y V+++++
Sbjct: 849 D--SLDATL-QALHQLELNLDAQLYVVDESDE 877
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
M+ ++ +E FR LLV+T GEEG+D+ C V+R+ +T +QS GRAR
Sbjct: 1105 MTSKEQRAAMEAFRQPGCRLLVSTSAGEEGIDVPRCEFVVRYSAAQTGRERVQSAGRARK 1164
Query: 528 PQSEYAFLVD 537
S + +V+
Sbjct: 1165 LGSRFVEIVE 1174
>gi|154282055|ref|XP_001541840.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412019|gb|EDN07407.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1437
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 16/230 (6%)
Query: 474 KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYA 533
K ++ RSG+ NLL+AT V EEG+D+ C LV+ FD + SFIQ RGRAR +S++
Sbjct: 440 KGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVVCFDTISNLRSFIQRRGRARKERSKFV 499
Query: 534 FLVDSGNQRELDLIKNFSKEEDRMN-------REIMDRTSSDAFTCSEERIYKVDSSGAC 586
++ + + K ++K ED M R + D + + + +++S+GA
Sbjct: 500 MFLNGDDNSQ---GKKWTKMEDVMKSMYEEDMRRLEDVWAKENVEEESDEDRRIESTGAL 556
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYF-DDLGGTICHIILPANA--PIHQIV-GT 642
++ L +C+ L EF + +P F + ++LGG + +L N P +++ G+
Sbjct: 557 LTFENARPHLEHFCATL-QCEFTDTRPVFMFRENELGGMVTAKVLLPNVLDPKFRVIKGS 615
Query: 643 PQSSMEA-AKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
E A++DA +A L++ G +ND+LLP A E + +S S
Sbjct: 616 KWWRTEKLAQRDAAFQAYLKLYQEGLVNDHLLPVHCMAMEHPALEYSEKS 665
Score = 86.7 bits (213), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 29/313 (9%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L PSI+H +E L+A EL + A +++ A++ +E + +R+E LGD
Sbjct: 897 LAPSIIHNVEIYLIAEELNKTILRPI---AFTDLSLVITAISASVAREATNYQRIEFLGD 953
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ L + EG L+R + V+N L A L +I F ++
Sbjct: 954 SILKFQTTLQLTATNLIWHEGLLSRAKDTVVSNKRLSYAAIEAGLDKFILLDVFTGAKW- 1012
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
R P + + S+ G A +++ KT+ADVVEAL+ A
Sbjct: 1013 ----RPPY-----NKDHLESEEQGVAQREMST-------------KTLADVVEALLAAAT 1050
Query: 1168 DDSGFKAATAFLKWIGIQVEFEA--SQVTNICISSKSFLPLSASLDMATLEILLGHQFLH 1225
D G + A L+ ++++ +V + S + + +E L+G+ F
Sbjct: 1051 LDGGQRKAEKCLEIFLPEIQWMPLEDRVNALYSSVPEAYENTLTSWFQEVESLVGYVFNK 1110
Query: 1226 RGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
+ L+QAF HPS YQRLEF+GDA+LD++I +L++ L + +R+ L
Sbjct: 1111 KVFLVQAFTHPSNPGSKTSSYQRLEFVGDAILDHIIVHHLFNAPRALPHFDMHLMRTALA 1170
Query: 1285 NNQAFANVAVDQS 1297
N A + + S
Sbjct: 1171 NADFLAFLCIGMS 1183
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YEL----AHLIRKPQKSICIFLAPT 114
R YQLE+ + ++ ENII+ + TG GKT +A+L I +EL AH FL PT
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIRHELETCAAH-------KFVWFLTPT 100
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGS--KRLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL +QQ K I + + ++ R G + W+ + ++V PQ+LL +
Sbjct: 101 VALAEQQHKNISQQLSAYETRLLLGSDNVNYWSTKKIWDDILLNIRIVVSTPQVLLDAMT 160
Query: 172 HRFIKMELIALLIFDE 187
H F+ M IALL+FDE
Sbjct: 161 HGFVTMPQIALLVFDE 176
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 1234 VHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVA 1293
+ S R YQR+EFLGD++L + T L + G L+ + +V+N+ + A
Sbjct: 934 ISASVAREATNYQRIEFLGDSILKFQTTLQLTATNLIWHEGLLSRAKDTVVSNKRLSYAA 993
Query: 1294 VDQSFYKFLIFDSNVLSETINNY-VDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILL 1352
++ KF++ D ++ Y D++ S + V + K L D+VE+ L A L
Sbjct: 994 IEAGLDKFILLDVFTGAKWRPPYNKDHL--ESEEQGVAQREMSTKTLADVVEALLAAATL 1051
Query: 1353 DSG 1355
D G
Sbjct: 1052 DGG 1054
>gi|386002261|ref|YP_005920560.1| Putative ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
gi|357210317|gb|AET64937.1| Putative ATP-dependent RNA helicase [Methanosaeta harundinacea 6Ac]
Length = 788
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 228/520 (43%), Gaps = 83/520 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +QLEL A++ + +V L TG GKT +A+++ LI + + +FLAPT LV+
Sbjct: 18 RLFQLELAASALQASTLVVLPTGLGKTVVALMV------LIARLNRGKVLFLAPTKPLVE 71
Query: 120 QQAKVIEESIGFK--VRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKM 177
Q A +E + V +F G + WE + +++V PQ++ L R I +
Sbjct: 72 QHASFLENVLADSTIVASFTGEILPERRKEMWE----EAKIVVSTPQVIENDLLSRRISL 127
Query: 178 ELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLP 237
++ +IFDE H A N+ Y I + + + ++ + G+TASP G+S L
Sbjct: 128 RDVSCIIFDEAHRAV--GNYAYVYIAERYGREGTDRL--VLGITASP----GSS----LE 175
Query: 238 KSINSLENLLDAKVYSVEDAE-DLESFVSSPVVRVYQYG--PVINDTSSSYVTCSEQLAE 294
+ N+ ++ + +A+ D+ FV + V + P I S E+ E
Sbjct: 176 RIEEVCGNIGATRIETKTEADPDVSPFVHQREIEVVKVAVPPEIQRVRSLLEEVLEERGE 235
Query: 295 IKREQYISALSRKLHDHQSL-------RNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
AL R L L R + K+L L ++ + +L+ + +
Sbjct: 236 --------ALDR-LGGSDGLRMPKRMDRTSKKELLDLQKRLRGLIAK-NPSPSLYQAVSV 285
Query: 348 LSGDETMRN--ELIEAEGNTIDDSLCRF------------ASQASEVFAAICRRDGIASD 393
L+ +++ EL E +G DSL R+ S+A++ R + D
Sbjct: 286 LAEVLKLKHAVELAETQGV---DSLGRYLERLASEAESRGGSKAAKRIMEDPRVEEAVGD 342
Query: 394 LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVN-RIVTARALSY-------ILQ 445
L+ ++V P + +L L+ + + +VF N R + L Y I++
Sbjct: 343 LARMDV-DHPKL-RAVLELVK--EQLTAKADSRIMVFTNYRDTASSVLDYLREAGDEIIR 398
Query: 446 NLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
++F+ A + +S+ IL+KFR G N+L+AT VGEEG+DI L
Sbjct: 399 PVRFVGQ-------SSRASDEGLSQRRQAEILQKFREGAYNVLIATSVGEEGIDIPATDL 451
Query: 506 VIRFD-LPETVASFIQSRGR-ARMPQSEYAFLVDSGNQRE 543
V+ ++ +P + S IQ +GR R LV G + E
Sbjct: 452 VLFYEPVPSEIRS-IQRKGRTGRARAGRVVVLVARGTRDE 490
>gi|19343863|gb|AAH25508.1| Ifih1 protein [Mus musculus]
Length = 467
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 404 FFSKKLLRLIG-ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLV 459
+ ++KL++L IL F R ++ + I+F + ALS +I++N KF + H L+
Sbjct: 138 YENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLI 197
Query: 460 GV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L +
Sbjct: 198 GAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 257
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 258 MVQARGRARADESTYVLVTSSGSGVTEREIVNDF 291
>gi|13278456|gb|AAH04031.1| Ifih1 protein, partial [Mus musculus]
Length = 514
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 404 FFSKKLLRLIG-ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLV 459
+ ++KL++L IL F R ++ + I+F + ALS +I++N KF + H L+
Sbjct: 185 YENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLI 244
Query: 460 GV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L +
Sbjct: 245 GAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 304
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 305 MVQARGRARADESTYVLVTSSGSGVTEREIVNDF 338
>gi|74142317|dbj|BAE31920.1| unnamed protein product [Mus musculus]
Length = 444
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 404 FFSKKLLRLIG-ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLV 459
+ ++KL++L IL F R ++ + I+F + ALS +I++N KF + H L+
Sbjct: 115 YENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLI 174
Query: 460 GV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L +
Sbjct: 175 GAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 234
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 235 MVQARGRARADESTYVLVTSSGSGVTEREIVNDF 268
>gi|448315775|ref|ZP_21505414.1| Hef nuclease [Natronococcus jeotgali DSM 18795]
gi|445610534|gb|ELY64304.1| Hef nuclease [Natronococcus jeotgali DSM 18795]
Length = 814
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 142/580 (24%), Positives = 232/580 (40%), Gaps = 98/580 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A + +V L TG GKT +++L+ + + LAPT LVQ
Sbjct: 26 RLYQLKLAGTAANHHTLVCLPTGLGKTTVSLLVTARRLEEV----GGTALMLAPTKPLVQ 81
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ E++ ++ F G W + V++ PQ++ L I
Sbjct: 82 QHAEFYREALQIPDDEIVVFTGDVSPDDRAALWTEAT----VVMATPQVIENDLVGSRIS 137
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + FDECH A ++ Y I + ++ P + GM+ASP G +A L
Sbjct: 138 LSDVTHCTFDECHRA--TGDYAYNYIAERYHAD--ANDPLVTGMSASP----GGDEEAIL 189
Query: 237 PKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK 296
N L + +V + EDA D+ F D + E++ EI
Sbjct: 190 EVCENL--GLQEVEVMTEEDA-DVAEFTHD------------TDVEWERIELPEEVLEI- 233
Query: 297 REQYISALSRKLHDHQSL--------RNTTKQLNRLHDSMKFCLENLGVCG----ALHAS 344
R+ ++ +L + L + K LNR+ ++ ++N G ++HA
Sbjct: 234 RDALNEVITDRLEKLKELGVASSTQPDQSQKDLNRMRAELQQLIDNDQSEGFEGMSVHAE 293
Query: 345 YILLSGDETMRNELIEAEGNTIDDSLCRF------------ASQASEVFAAICR-RDGIA 391
+ L R + E +++ +L R+ AS+AS+ + R R+ I
Sbjct: 294 VMKL------RQAVTLVETQSVE-ALRRYFERQRNQARSSGASKASQRMVSDPRVRESIR 346
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
+ E+ P + K + L T L+ + IVF TA AL+ L
Sbjct: 347 KAENFDEI--HPKYRKSRMLLA---ETLGLEGGDRVIVFTESRDTAEALTDFLSE----- 396
Query: 452 SWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
S+ VG G M++ + +L+ FR GE +LV+T V EEGLD+ LV+ +
Sbjct: 397 SFDAKRFVGQGDREGSDGMTQKEQQEVLDAFRGGEFEVLVSTSVAEEGLDVPEVDLVLFY 456
Query: 510 DLPETVASFIQSRGR-------------ARMPQSEYAFLVDSGNQRELDL-IKNFSKEED 555
+ T IQ +GR A + E F + ++E++ ++ D
Sbjct: 457 EPVPTAIRSIQRKGRTGRQSEGRVVVLLAEDTRDEAYFWISKRREKEMESELRELKGMAD 516
Query: 556 RMNREIMDRTSS-DAFTCSEERIYKVDSSGACISAGYGVS 594
+ E+ D S AF E KVD G G G S
Sbjct: 517 DLEAELDDAQQSLAAF----ESGAKVDGGGGKSQPGAGAS 552
>gi|379055833|emb|CCD32420.1| dicer-1b, partial [Acyrthosiphon svalbardicum]
gi|379055835|emb|CCD32421.1| dicer-1b, partial [Acyrthosiphon kondoi]
Length = 272
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 51/238 (21%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALTT + +LERLE +GD+FLKYAV +L+ H+ V EG L+ RSN V+
Sbjct: 63 SPSILLQALTTSNANDGINLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVS 122
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRA------ 1133
N NL +L L+++ ER I ++++ R+
Sbjct: 123 NLNLYRLGK---LKMF-------------------------GERMISTKFEPRSNWLPPC 154
Query: 1134 ---PDDLNAEV---RCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV- 1186
P L V S H ++ K+IAD VEAL+GA++ G + A F+ W+GI+V
Sbjct: 155 FIEPHKLEKAVINSNISITQHIINDKSIADCVEALIGAYLISCGNRGALLFMSWLGIRVL 214
Query: 1187 -EFEASQVTNICISSKSFL--------PLSASLD-MATLEILLGHQFLHRGLLLQAFV 1234
+ S++ + S S L L+ +D + E LG+ F R LLQA
Sbjct: 215 NTLDDSKLGYLKPPSSSILHNINDSEGELTKLMDGFESFEQHLGYCFQDRSYLLQAMT 272
Score = 44.7 bits (104), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
+LLQA + N G +RLE +GD+ L Y +T+YLY + + G L+DLRS V+N
Sbjct: 66 ILLQALTTSNAND-GINLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNHVSN 123
>gi|390341546|ref|XP_797737.3| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
[Strongylocentrotus purpuratus]
Length = 783
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 231/549 (42%), Gaps = 67/549 (12%)
Query: 62 YQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQ 120
YQ+EL K A+ N V TG GKT++AV + E+ L + P K + IF+ V+LV +
Sbjct: 88 YQVELAKPALRGHNTCVVAPTGSGKTYVAVAVAQEV--LRKSPGKKV-IFVVNQVSLVYK 144
Query: 121 QAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
++ V ++ I V CG + + + ++ + + +V+V+ QIL+ L +
Sbjct: 145 RSTVFKKYIN-DVAYICGDHGQPEITRLPLDEVLKKNDVVVLTAQILVDALTKGQVSFNQ 203
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYK---------PDIMKVPRIFG----------- 219
I L+I DECH + K Y IM + + P I+ + G
Sbjct: 204 IGLIILDECH--ETKKESQYNAIMAKYMEQKLTNKEPLPQILGMTASLGVGNARSDKNAI 261
Query: 220 -----MTASPVVGKGASAQAN---LPKSINSLENLLDAKVYSVED--AEDLESFVSSPVV 269
M A+ V K ++ Q + L K +N + L ED AE+++ +
Sbjct: 262 QYMLKMCANMDVVKLSTVQKHKESLEKVVNEPDEGLHVVTSRTEDSFAEEIQDLM----- 316
Query: 270 RVYQYGPVINDTSSSYV--TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDS 327
YQ IN ++ S V T E+L+ ++ + SR+ H L K++ S
Sbjct: 317 --YQVFKYINSSTGSSVLNTTVEKLSSLRSSNH----SRENFSH-VLCTLKKEIIENFQS 369
Query: 328 MKFCLENLGVCGALHASYILLSGDETMRN-ELIEAEGNTIDDSLCRFASQASEVFAAICR 386
L + L L+ ET R + +E I + + A+ +E
Sbjct: 370 SDLQLSLMTCAQYLKEYSSALAIHETARTKDALEYLQEFIREKSNKAATSNTEKMLIRTF 429
Query: 387 RDGIASDLSCIEVL----KEPFFSKKLLRLIGILSTFRLQQH---MKCIVFVNRIVTARA 439
+D +L I + P + + G + T + Q++ + I+F I + A
Sbjct: 430 QDK-QQELERISMSPKSPNNPALDELQSLIEGDIVTCQTQENNGPFRAILFTQTIASTWA 488
Query: 440 LSYILQNLKFLASWRCHFLVGV-NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGL 498
L + L LVG N G M+ K +L+ FR G LL+AT ++G+
Sbjct: 489 LKNWVMETDSLKDLHPEVLVGCRNPG---MNLRHQKDVLDNFRDGVHKLLIATSAMQQGI 545
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMN 558
DI C V R++ + IQ+RGR R P + +V R LD+ SKE++++
Sbjct: 546 DIPACNFVYRYNYITDAVARIQARGRTRKPGGRFDLVVHG--YRGLDVKDKLSKEQEQIM 603
Query: 559 REIMDRTSS 567
+ D SS
Sbjct: 604 QRATDAVSS 612
>gi|157822253|ref|NP_001102669.1| interferon-induced helicase C domain-containing protein 1 [Rattus
norvegicus]
gi|149022117|gb|EDL79011.1| similar to HELICARD (predicted) [Rattus norvegicus]
Length = 1027
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 404 FFSKKLLRLIG-ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLV 459
+ ++KL++L IL F R ++ + I+F + ALS +I++N KF + H L+
Sbjct: 698 YENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLI 757
Query: 460 GV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L +
Sbjct: 758 GAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 817
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 818 MVQARGRARADESTYVLVTSSGSGVTEREIVNDF 851
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 37 GVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYE 95
G ++ +G ++ P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + +
Sbjct: 288 GSDSDEDTIMGTKRASPKPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD 347
Query: 96 LAHLIRKPQ---KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKE 152
HL +K Q I L V L +Q + K G S + + +
Sbjct: 348 --HLDKKKQACESGKVIVLVNKVMLAEQLFRKEFNPFLKKWYRIIGLSGDTQLKISFPEV 405
Query: 153 IDQYEVLVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF 206
+ Y+V++ QIL L + +++ +L+I DECHH ++ Y IM+ +
Sbjct: 406 VKSYDVIISTAQILENSLLNLESGEDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRY 463
Query: 207 YKPDI------------MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
K + + +P+I G+TASP VG A Q+ K I ++ LDA
Sbjct: 464 LKQKLKNHKLKKQNKPTIHLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDA 517
>gi|379055845|emb|CCD32426.1| dicer-1a, partial [Acyrthosiphon svalbardicum]
Length = 319
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 42/257 (16%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ HD V EG+L+ RS V+
Sbjct: 63 SPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 122
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA-------LGRRCPRI--------- 1116
N NL +L + + +P D PC F + P
Sbjct: 123 NLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNKITLPT 182
Query: 1117 ----CSKETERTIHSQYDGRAPDDL-NAEVRCSKG---HHWLHKKTIADVVEALVGAFID 1168
KE E I +G + +D+ N + H + K+IAD VEAL+GA++
Sbjct: 183 FKDPTDKEIEEVIQQFKNGFSNEDVENTPLFVPYNLVTQHSIPDKSIADCVEALIGAYLI 242
Query: 1169 DSGFKAATAFLKWIGIQV--EFEASQVTNICISSKSFL--------PLSASLD-MATLEI 1217
G + A F+ W+GI+V + S++ + S L L+ +D + E
Sbjct: 243 SCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPSSPLLRNVDDPEGELTKLMDGFESFEQ 302
Query: 1218 LLGHQFLHRGLLLQAFV 1234
LG++F R LLQA
Sbjct: 303 HLGYRFQDRSYLLQAMT 319
Score = 42.7 bits (99), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
+LLQA + N G +RLE +GD+ L Y IT+YLY + + G+L+ LRS V+N
Sbjct: 66 VLLQALTMSNAND-GINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSN 123
>gi|344313225|gb|AEN04472.1| retinoic acid-inducible protein I [Carassius auratus]
Length = 947
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 238/540 (44%), Gaps = 63/540 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ EL A++ +N I+ TGCGKT I L I E HL + P+++ +FLA V +
Sbjct: 258 REYQKELTAAAVQGQNTIICAPTGCGKT-IVALAICEY-HLKQSPRRAKIVFLATKVDVY 315
Query: 119 QQQAKVIEESIG-----FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+QQ K+ + +V CG + W I+ ++++VM QIL+ L
Sbjct: 316 EQQYKLFMKHFSRTDPSIRVMGMCGD---MDLSVQWL--IENHDIVVMTAQILVNALQSG 370
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
+ +EL++L++ DECH+ K HPY IM + + +P+I G+TAS +G
Sbjct: 371 EVPSLELLSLILLDECHNTTGK--HPYNNIMTRYLDTKLSSSTHSLPQIVGLTASVGIG- 427
Query: 229 GASAQANLPKSINSLE--NLLDAKVYSV--EDAEDLESFVSSP-----VVRVYQYGPVIN 279
S + L N L+ LD +V + + ++L+++V +P V + Y P I
Sbjct: 428 --SFKNRLEAENNILQLCANLDTRVITTVKKQLDELKTYVHTPEKEFFEVSKHTYDPFIR 485
Query: 280 DTSSSYVTCSEQLAEIKRE-QYISALSRKLHDHQSLRN--TTKQLNRLHDSMKFCLENLG 336
+ ++ EQLA+ + +S + + + Q + Q +R MK E
Sbjct: 486 -IIKNIMSNIEQLAQKAFNIESLSNIQNREYGSQKYEQWIVSVQKSRRVIQMKDTNEERR 544
Query: 337 VCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA--- 391
+C L + ++ D + NE +A D L F Q R A
Sbjct: 545 ICRELYNYTEHLRKYNDALIINE--DARTKDALDYLDGFFEQVRNAGYDETERKLTALYD 602
Query: 392 -SDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKF 449
+ + E + KL L IL ++ + ++ V A A+ + +
Sbjct: 603 SQRPQLLHLASEGQQNPKLEELKFILEEEYQNNDETRTVLLVKTRALADAMKKWIDDTDS 662
Query: 450 LASWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELN-----LLVATKVGEEGL 498
L + L+G G KS M+ + K +L+ F+S + N +L+AT V +EG+
Sbjct: 663 LKFLKPGVLIG--KGRKSNFTGSVMTLTSKKGVLDSFKSTDQNSDQSKILIATSVADEGI 720
Query: 499 DIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ----RELDLIKNFSKEE 554
DI C LV+ ++ V +Q RGR R Q FL+ S + +++IK EE
Sbjct: 721 DIPQCNLVLMYEYVGNVVKMVQVRGRGR-AQGSRCFLISSSKECIEKERINMIKEKIAEE 779
>gi|379055867|emb|CCD32437.1| dicer-1a, partial [Acyrthosiphon kondoi]
gi|379055869|emb|CCD32438.1| dicer-1a, partial [Acyrthosiphon kondoi]
Length = 319
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 42/257 (16%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S +LL+ALT + +LERLE +GD+FLKYA+ +L+ HD V EG+L+ RS V+
Sbjct: 63 SPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 122
Query: 1080 NSNLLKLAARNNL---QVYIRDQPFD----PCQFFA-------LGRRCPRI--------- 1116
N NL +L + + +P D PC F + P
Sbjct: 123 NLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNMITLPT 182
Query: 1117 ----CSKETERTIHSQYDGRAPDDL-NAEVRCSKG---HHWLHKKTIADVVEALVGAFID 1168
KE E I +G + +D+ N + H + K+IAD VEAL+GA++
Sbjct: 183 FKDPTDKEIEEVIQQFKNGFSNEDVENTPLFVPYNLVTQHSIPDKSIADCVEALIGAYLI 242
Query: 1169 DSGFKAATAFLKWIGIQV--EFEASQVTNICISSKSFL--------PLSASLD-MATLEI 1217
G + A F+ W+GI+V + S++ + S L L+ +D + E
Sbjct: 243 SCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPSSPLLRNVDDPEGELTKLMDGFESFEQ 302
Query: 1218 LLGHQFLHRGLLLQAFV 1234
LG++F R LLQA
Sbjct: 303 HLGYRFQDRSYLLQAMT 319
Score = 42.7 bits (99), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
+LLQA + N G +RLE +GD+ L Y IT+YLY + + G+L+ LRS V+N
Sbjct: 66 VLLQALTMSNAND-GINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSN 123
>gi|197246579|gb|AAI68680.1| Ifih1 protein [Rattus norvegicus]
Length = 775
Score = 94.4 bits (233), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 404 FFSKKLLRLIG-ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLV 459
+ ++KL++L IL F R ++ + I+F + ALS +I++N KF + H L+
Sbjct: 446 YENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENEKFAEVGVKAHHLI 505
Query: 460 GV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L +
Sbjct: 506 GAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIA 565
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 566 MVQARGRARADESTYVLVTSSGSGVTEREIVNDF 599
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 27/235 (11%)
Query: 37 GVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYE 95
G ++ +G ++ P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + +
Sbjct: 36 GSDSDEDTIMGTKRASPKPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD 95
Query: 96 LAHLIRKPQ---KSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKE 152
HL +K Q I L V L +Q + K G S + + +
Sbjct: 96 --HLDKKKQACESGKVIVLVNKVMLAEQLFRKEFNPFLKKWYRIIGLSGDTQLKISFPEV 153
Query: 153 IDQYEVLVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF 206
+ Y+V++ QIL L + +++ +L+I DECHH ++ Y IM+ +
Sbjct: 154 VKSYDVIISTAQILENSLLNLESGEDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRY 211
Query: 207 YKPDI------------MKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
K + + +P+I G+TASP VG A Q+ K I ++ LDA
Sbjct: 212 LKQKLKNHKLKKQNKPTIHLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDA 265
>gi|166240125|ref|XP_647462.2| hypothetical protein DDB_G0268410 [Dictyostelium discoideum AX4]
gi|165988755|gb|EAL73658.2| hypothetical protein DDB_G0268410 [Dictyostelium discoideum AX4]
Length = 1385
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 84/343 (24%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGD+ LK +LF + + EG L++ RS+ N +LL ++ R L+ +R
Sbjct: 1095 QRLEFLGDSVLKLVSTIYLFFKYPKMSEGFLSQTRSDFTKNDHLLDVSKRLGLEEILR-- 1152
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVV 1159
++ + R P ADV+
Sbjct: 1153 -------------------------FTTEEEFRKPQ--------------------ADVI 1167
Query: 1160 EALVGA-FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEIL 1218
EAL+GA +ID F+A + WI + + E I + F A ++
Sbjct: 1168 EALIGAVYIDRGFFEAYKLTVCWIFDEPDAEYP------IYNTKFEETLAHQEIRAFLDG 1221
Query: 1219 LGHQFLHRGLLLQAFVHP-SFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
+G H LL +A P SF+ YQRLE++GDAVLD+ ++ +LY+ +P + GQLT
Sbjct: 1222 IGVHISHSSLLEEALCFPYSFHSASKSYQRLEYVGDAVLDFFVSDFLYATFPLAQEGQLT 1281
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPK 1337
D RS LV N ++++ + P+ ++ +++ K
Sbjct: 1282 DYRSRLVRNSNLSSIS-----------------------RKLCLPPTVSKGIRDTLPIKK 1318
Query: 1338 VLGDLVESSLGAILLDSGFNLNTVWKIMLSFLD-----PILKF 1375
LGD +ES +G +D+ + ++ +LD P+ +F
Sbjct: 1319 -LGDYLESFIGCCFVDTTQSFEYTKSLVYKYLDLRIDNPLFEF 1360
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 42/146 (28%)
Query: 1228 LLLQAFVHPS--------FNRLG---------GCYQRLEFLGDAVLDYLITSYLYSVYPK 1270
+L + F HPS +LG G QRLEFLGD+VL + T YL+ YPK
Sbjct: 1060 ILREVFTHPSTKTIPKRTLTQLGIFGKYQPYLGDNQRLEFLGDSVLKLVSTIYLFFKYPK 1119
Query: 1271 LKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVK 1330
+ G L+ RS N +V+ + L F +T E
Sbjct: 1120 MSEGFLSQTRSDFTKNDHLLDVSKRLGLEEILRF--------------------TTEEEF 1159
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGF 1356
P+ D++E+ +GA+ +D GF
Sbjct: 1160 RKPQ-----ADVIEALIGAVYIDRGF 1180
>gi|377643882|gb|ADC81089.2| retinoic acid-inducible protein I [Ctenopharyngodon idella]
Length = 947
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 232/525 (44%), Gaps = 63/525 (12%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
R+YQ EL A++ +N I+ TGCGKT I L I E HL + P+++ +FLA V +
Sbjct: 258 REYQKELTAAAVQGQNTIICAPTGCGKT-IVALAICEY-HLKQSPRRAKIVFLATKVDVY 315
Query: 119 QQQAKVIEESIG-----FKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+QQ K+ + +V CG + W I+ ++++VM QIL+ L
Sbjct: 316 EQQYKLFMKHFSRTDPSIRVMGMCGD---MDLSVQWL--IENHDIVVMTAQILVNALQSG 370
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGK 228
+ +EL++L++ DECH+ K HPY IM + + +P+I G+TAS +G
Sbjct: 371 EVPSLELLSLILLDECHNTTGK--HPYNNIMTRYLDTKLSSSTHSLPQIVGLTASVGIG- 427
Query: 229 GASAQANLPKSINSLE--NLLDAKVYSV--EDAEDLESFVSSP-----VVRVYQYGPVIN 279
S + L N L+ LD +V + + ++L+++V +P V + Y P I
Sbjct: 428 --SFKNRLEAENNILQLCANLDTRVITTVKKQLDELKTYVHTPEKEFFEVSKHTYDPFIR 485
Query: 280 DTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDS-----MKFCLEN 334
+ ++ EQLA+ + I +LS + + + + + S MK E
Sbjct: 486 -IIKNIMSNIEQLAQ--KAFNIESLSNIQNREYGSQKYEQWIVSVQKSCRVIQMKDTNEE 542
Query: 335 LGVCGAL--HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIA- 391
+C L + ++ D + NE +A D L F Q R A
Sbjct: 543 RRICRELYNYTEHLRKYNDALIINE--DARTKDALDYLDGFFEQVRNAGYDETERKLTAL 600
Query: 392 ---SDLSCIEVLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNL 447
+ + E + KL L IL ++ + ++FV A A+ + +
Sbjct: 601 YDSQRPQLLHLASEGQQNPKLEELKFILEEEYQNNDETRTVLFVKTRALADAMKKWIDDT 660
Query: 448 KFLASWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELN-----LLVATKVGEE 496
L + L+G G KS M+ + K +L+ F+S + N +L+AT V +E
Sbjct: 661 DSLKFLKPGVLIG--KGRKSNFTGSVMTLTSKKGVLDSFKSTDQNSDQSKILIATSVADE 718
Query: 497 GLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ 541
G+DI C LV+ ++ V +Q RGR R Q FL+ S +
Sbjct: 719 GIDIPQCNLVLMYEYVGNVVKMVQVRGRGR-AQGSRCFLISSSKE 762
>gi|441494712|gb|AGC51036.1| melanoma-differentiation-associated 5 [Anser anser]
Length = 1004
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 398 EVLKEPFF-SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARAL-SYILQNLKFL-ASW 453
E+ + P + ++KL++L ++ F + + I+F +A AL +I+ N KF
Sbjct: 667 ELARNPEYENEKLIKLRNTLMEEFTKTKEPRGIIFTKTRQSAFALFQWIMDNPKFEEVGI 726
Query: 454 RCHFLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
+ H+L+G N+ K M++N + +++KFR G ++LL+AT V EEGLDI+ C +VIR+ L
Sbjct: 727 KAHYLIGAGHNSETKPMTQNEQREVIDKFRGGSVDLLIATTVAEEGLDIKECNIVIRYGL 786
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGN 540
+ +Q+RGRAR +S YA + SG+
Sbjct: 787 VTNEIAMLQARGRARADESTYALVASSGS 815
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 44/283 (15%)
Query: 20 ICAATSAVVEECSVAVSGVGFGAESSVGAQKTDK-------DPKQIARKYQLELCKKAME 72
+ + A E+ SV+ G S+ D+ +P I R YQ+E+ K A+
Sbjct: 257 VVLESDAATEDRSVSNMNENLGQSSTTSDSDEDEMESRASPEPDLILRDYQMEVAKPALN 316
Query: 73 -ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQQQAKVIEES 128
ENII+ L TG GKT +AV + + HL +K + S I L V LV+Q + +E
Sbjct: 317 GENIIICLPTGSGKTRVAVYITKD--HLDKKKRASEPGKVIVLVNKVPLVEQHLR--KEF 372
Query: 129 IGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH------RFIKME 178
F R + G +LK + + + +Y+V++ QIL L + + +
Sbjct: 373 NPFLKRWYQVIGLSGDSQLK--ISFPEVVRRYDVIISTAQILENSLLNATEEDEEGVHLS 430
Query: 179 LIALLIFDECHHAQVKSNHPYAKIMKDFYKPD------------IMKVPRIFGMTASPVV 226
+L+I DECHH Q + Y IM+ + K ++ P+I G+TASP V
Sbjct: 431 DFSLIIIDECHHTQKEG--VYNNIMRRYVKEKMKNRKLAKENKPLIPQPQILGLTASPGV 488
Query: 227 GKGASAQANLPKSINSLENLLDA-KVYSVED-AEDLESFVSSP 267
G GA++ + I + LDA ++ +VE+ A L++ V P
Sbjct: 489 G-GANSNPKAEEHILKICANLDARRIMTVEEHASQLKNQVKEP 530
>gi|380741022|tpe|CCE69656.1| TPA: hef nuclease [Pyrococcus abyssi GE5]
Length = 749
Score = 94.0 bits (232), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 229/539 (42%), Gaps = 81/539 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQ + K E N ++ L TG GKT IA+++ Y L K + LAPT LV
Sbjct: 11 RLYQELIYAKCKERNCLIVLPTGLGKTIIAMMIADYRLNKYGGK-----VLMLAPTKPLV 65
Query: 119 QQQAKVIEESIGF---KVRTFCGG---SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
Q A+ + K+ G S+R+K+ W ++ +V++ PQ + L
Sbjct: 66 LQHAETFRKFFNLPPEKIVALTGEVSPSERVKA---W----NRAKVIIATPQTVENDLLT 118
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
I +E + L+IFDE H A N+ Y I +++ + K P + G+TASP G+S
Sbjct: 119 GKINLEDVVLVIFDEAHRAV--GNYAYVYIAREYL--NQAKNPHVIGLTASP----GSSQ 170
Query: 233 QANLPKSINSLENL-LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+ K + L NL ++ Y E++ D++ P V+ ++ + + Y +
Sbjct: 171 E----KILEVLRNLGIEHIEYRSENSPDVK-----PYVQGIKFEWIKVELPGLYKEVRKL 221
Query: 292 LAEIKREQY--------ISALSRKLHDHQSLR------NTTKQLNRLHDSMKFCLENLGV 337
L ++ R+ I + S L + LR T + N HD K L +
Sbjct: 222 LRDMLRDSLKPLAEAGLIESASADLPKKEILRAGQIINEETAKGN--HDLRKLLLFHAMA 279
Query: 338 CGALHASYIL----LSGDETMRNELIE--AEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
HA +L LS +L E G+T + + A + + +
Sbjct: 280 LKLHHAIELLETQGLSALRVYLKKLYEEAKTGSTRASKELFLDRRMKKALALLIQAKELG 339
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
D +EVLKE ++L + +++ K IVF N TAR + L
Sbjct: 340 IDHPKMEVLKE-LVKEQLSK----------KENSKIIVFTNYRETARKVVEELTK----E 384
Query: 452 SWRCHFLVG--VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
+ VG + MS+ K IL+ F GE N+LVAT VGEEGLD+ LV+ +
Sbjct: 385 GIKAKRFVGQATKENDRGMSQREQKLILDSFARGEFNVLVATSVGEEGLDVPEVDLVVFY 444
Query: 510 D-LPETVASFIQSRGR-ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS 566
+ +P + S +Q RGR R L+ G + E SK ++R RE + S
Sbjct: 445 EPVPSAIRS-VQRRGRTGRQKPGRVVILIAQGTRDEAYYWS--SKHKERQMRETIRMVS 500
>gi|20095114|ref|NP_614961.1| Hef nuclease [Methanopyrus kandleri AV19]
gi|19888409|gb|AAM02891.1| ERCC4-like helicase-nuclease [Methanopyrus kandleri AV19]
Length = 741
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 209/481 (43%), Gaps = 62/481 (12%)
Query: 60 RKYQLELCKKAME--ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVAL 117
R+YQ+ + + ++ +N +V + TG GKT I V+++ EL R +FLAPTV L
Sbjct: 15 REYQVSVAAEILDSMDNTLVVIPTGLGKTAIGVMVLSELVDEGR------AVFLAPTVPL 68
Query: 118 VQQQAKVIEESI-GFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
V Q A+ IE + G V+ G + + +W+K +V+V P ++ + I
Sbjct: 69 VNQHARFIERATRGLDVKALTGRVRPERRKVEWKKS----DVIVATPHVIRNDIIEGRID 124
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ +++IFDE H A +PY + K+F + +KV G+TASP +++
Sbjct: 125 PDEASVVIFDEAHRAV--GGYPYVYVSKEF---NCLKV----GLTASP--------GSDV 167
Query: 237 PKSINSLENL-LDAKVYSVEDAEDLESFVSSPVVRV--YQYGPVINDTSSSYVTCSEQLA 293
+ ++NL ++ + E+ D++ ++ V + ++ E+
Sbjct: 168 KRIKEVVQNLGIERIIVKTEEDPDVKKYLGRVKVEWVDVELPEWFDNARRELQRAFERRL 227
Query: 294 EIKREQYISALSRKLHDHQ--SLRNTTK-QLNRLHDSMKFCLENLGVCG-ALHASYILLS 349
E+ + SR + + SLR + Q+ + + +C LGV AL +
Sbjct: 228 ELLEDMGFLQSSRNVWVGKLLSLREEIREQMAKRRERASWCSRALGVVAEALRIARA--- 284
Query: 350 GDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKL 409
E++E +G + R+ + +E R + S +L +P F ++
Sbjct: 285 ------REILETQGI---EPFLRYVERLTE-------RKRSSGGSSLRRILGDPNF-QRA 327
Query: 410 LRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKFLASW--RCHFLVGVNAG 464
+R S H K V + +A + + K +A + VGV G
Sbjct: 328 VRECKSASLRDEPDHPKLPEVEELVKDVESALVFTQYVDTAKLIADYLKEIGISVGVLLG 387
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
+ M + +++ + GE +LV+T VGEEGLD+ TC V+ ++ + IQ GR
Sbjct: 388 KEHMKEHEQLDVIKSIKRGECRVLVSTSVGEEGLDLPTCEEVVLYEPVPSEIRTIQRIGR 447
Query: 525 A 525
Sbjct: 448 T 448
>gi|405968673|gb|EKC33722.1| Dicer-like protein 2 [Crassostrea gigas]
Length = 520
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 222/530 (41%), Gaps = 116/530 (21%)
Query: 108 CIFLAPTVALVQQQAKVIEESIG-------------------FKVRTFCGGSKRLKSHCD 148
+FL V LV QQ++ + + IG K+ CGG + +
Sbjct: 15 ALFLVDKVLLVIQQSRYLVKQIGDRIYKRFDPENPSKLVERKLKIAALCGGQQSTQGVPI 74
Query: 149 WEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD--F 206
W Q++++V+ + ++ E + +++FDE HH NHP+ K++++
Sbjct: 75 W-----QHDLIVVTAAYCEQLIMKNVLRWEDLCIVVFDEAHHC--TKNHPFNKLLENNHL 127
Query: 207 YKPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKV-----YSVEDAEDLE 261
+P + + P+I G+TASP + + P ++ L+ L+ + + E +L+
Sbjct: 128 TRP-LGERPKILGLTASP------AGKKTFPFTVTMLQTLMKSMGETEIGVTKEQKAELD 180
Query: 262 SFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTT--- 318
+ SS + VY Y P +ND +EQ + + + Y+ +L ++ +
Sbjct: 181 RYQSSAELIVY-YKP-MND--------NEQKLQNELQMYLLRCFLRLKAETNILDKIDQG 230
Query: 319 ---KQLNRLHDSMKFCLENLGVCGA-----------------LHASYILLSGDETMRNEL 358
KQ LH + CLE + + A LH +I ++ N L
Sbjct: 231 MEPKQAEDLHGDILNCLE-VSLNDAESYDQSAAKKIENRHLVLHTRFICIA-----LNTL 284
Query: 359 IEAEGNTIDDSLCRFASQASEVFAAICRRDGIASD--LSCIEVLK-------------EP 403
EA T + L + + + + D S I +++ E
Sbjct: 285 FEAGVKTAVEELDELMALDVNFNFDFAKENNLDPDNLQSVIRLVRNDERISLPGPINPET 344
Query: 404 FFSKKLLRLI-GILSTFRL---QQHMKCIVFVNRIVTARALSYILQ---NLKFLASWRCH 456
S K++ LI IL+ + Q++ +V V +TA +S ILQ ++K + H
Sbjct: 345 QHSSKIVALIHTILNKNNIDWTQENPMTLVLVKERITASKISKILQEQDDIKRMGLRVTH 404
Query: 457 FLVGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
+ + M+ N K IL + + +++VAT V EEG+DI C LVI +LP +
Sbjct: 405 LVGHGGGSGEGGGMAVNQQKKILRDIKHHKYHIVVATSVAEEGIDIPECELVITMNLPSS 464
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDR 564
V + +Q RGRAR S++ L EED++ +E++DR
Sbjct: 465 VTALVQMRGRARKEHSKFVVLCSE------------KMEEDKL-KELLDR 501
>gi|410968747|ref|XP_003990861.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Felis catus]
Length = 1018
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 420 RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKS 475
R ++ + I+F +A ALS +I +N KF + H L+G ++ K M++N K
Sbjct: 706 RTEESARGIIFTKTRQSAYALSQWITENKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKE 765
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
++ KFR+G++NLL+AT V EEGLDI+ C +VIR+ L + +Q+RGRAR +S Y +
Sbjct: 766 VISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLV 825
Query: 536 VDSGN 540
SG+
Sbjct: 826 AHSGS 830
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 29/235 (12%)
Query: 38 VGFGAESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYEL 96
+G +E A++ +P+ R YQ+E+ + A+E +NII+ L TG GKT +AV + +
Sbjct: 279 MGSDSEEENVAERASPEPELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKD- 337
Query: 97 AHLIRKPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEI 153
HL +K + S I L V LV+Q + E K G S + + + +
Sbjct: 338 -HLDKKKKASEPGKVIVLVNKVPLVEQLFRKEFEPFLKKWYHTIGLSGDTQLKISFPEVV 396
Query: 154 DQYEVLVMIPQILLYCLYHRFI------KMELIALLIFDECHHAQVKSNHPYAKIMKDFY 207
Y+V++ QIL L + I ++ +L++ DECHH ++ Y IM+ +
Sbjct: 397 KTYDVIISTAQILENSLLNSEIGEDDGVQLSDFSLIVIDECHHTNKEA--VYNNIMRRYL 454
Query: 208 -------------KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDA 249
KP ++ +P+I G+TASP VG GA QA + I + LDA
Sbjct: 455 KQKLKNNKLKKECKP-VIPLPQILGLTASPGVG-GAKRQAEAKEHILKICANLDA 507
>gi|149730873|ref|XP_001494380.1| PREDICTED: interferon-induced helicase C domain-containing protein
1 [Equus caballus]
Length = 1022
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 420 RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKS 475
R ++ + I+F +A ALS +I +N KF + H L+G ++ K M++N K
Sbjct: 710 RTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKE 769
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
++ KFR+G++NLL+AT V EEGLDI+ C +VIR+ L + +Q+RGRAR +S Y +
Sbjct: 770 VISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLV 829
Query: 536 VDSGN 540
SG+
Sbjct: 830 AHSGS 834
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 37/258 (14%)
Query: 38 VGFGAESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYEL 96
+G ++ A++ +P+ R YQ+E+ + A+E +N+I+ L TG GKT +AV + +
Sbjct: 287 MGSDSDEENVAERASPEPELHLRPYQMEVAQPALEGKNVIICLPTGSGKTRVAVYVTKD- 345
Query: 97 AHLIRKPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVR----TFCGGSKRLKSHCDW 149
HL +K + S I L V LV+Q + +E F + T G +LK +
Sbjct: 346 -HLDKKKETSEPGKVIVLVNKVPLVEQLFR--KEFNPFLKKWYRITRLSGDTQLK--ISF 400
Query: 150 EKEIDQYEVLVMIPQILLYCLYHR------FIKMELIALLIFDECHHAQVKSNHPYAKIM 203
+ + ++V++ QIL L + + + +L+I DECHH ++ Y IM
Sbjct: 401 PEVVKSHDVIISTAQILENSLLNSEKGEDAGVVLSDFSLIIIDECHHTNKEA--VYNNIM 458
Query: 204 KDFYKPD------------IMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKV 251
+ + K ++ +P+I G+TASP VG GA+ QA + I + LDA V
Sbjct: 459 RRYLKQKLKNNRLKKENKPVIPLPQILGLTASPGVG-GATKQAKAEEHILKICANLDASV 517
Query: 252 YSV--EDAEDLESFVSSP 267
E+ + L+ + P
Sbjct: 518 IKTVKENIDQLKDQIKEP 535
>gi|349605522|gb|AEQ00731.1| Interferon-induced helicase C domain-containing protein 1-like
protein, partial [Equus caballus]
Length = 530
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 4/124 (3%)
Query: 420 RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMSRNAMKS 475
R ++ + I+F +A ALS +I +N KF + H L+G ++ K M++N K
Sbjct: 218 RTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKE 277
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
++ KFR+G++NLL+AT V EEGLDI+ C +VIR+ L + +Q+RGRAR +S Y +
Sbjct: 278 VISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLV 337
Query: 536 VDSG 539
SG
Sbjct: 338 AHSG 341
>gi|2244899|emb|CAB10321.1| UFD1 like protein [Arabidopsis thaliana]
gi|7268289|emb|CAB78584.1| UFD1 like protein [Arabidopsis thaliana]
Length = 778
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 6/157 (3%)
Query: 1210 LDMATLEILLGHQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVY 1268
+++ +LE +L ++F + LLL+AF S+ + Y+ LE LGD++L+ I +Y
Sbjct: 52 MEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLY 111
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-PSSTR 1327
PK PG LT LR++ V+ + A VAV+ Y +L +L E I +V+ M P +
Sbjct: 112 PKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAMEKYPLHSN 171
Query: 1328 EVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
+ + PKVL D+VES++GAI +D + TVWKI
Sbjct: 172 GLL---KVPKVLADIVESTIGAIFMDCN-STETVWKI 204
>gi|345004287|ref|YP_004807140.1| ERCC4 domain-containing protein [halophilic archaeon DL31]
gi|344319913|gb|AEN04767.1| ERCC4 domain protein [halophilic archaeon DL31]
Length = 790
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 198/495 (40%), Gaps = 79/495 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQL+L A E + +V L TG GKT +++L+ E + + LAPT LVQ
Sbjct: 23 RLYQLQLAGTAQEADTLVCLPTGLGKTTVSLLVTAERLQSV----GGNALLLAPTKPLVQ 78
Query: 120 QQAKVIEESIGF---KVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
Q A+ E++ ++ F G W D +++ PQ++ L I
Sbjct: 79 QHAEFYREALQIPDEEIVVFTGEVSPEDRAALW----DSATIVIATPQVVENDLVGNRIS 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANL 236
+ + + FDECH A ++ Y I + ++ P + GM+ASP +
Sbjct: 135 LADVTHITFDECHRA--TGDYAYVYIAERYHAD--AADPLVTGMSASP--------GGDE 182
Query: 237 PKSINSLENL-LDAKVYSVEDAEDLESFVSSPVVR---------VYQYGPVINDTSSSYV 286
+ + ENL L+ ED D+ F V+ + + +IN+
Sbjct: 183 EEILEVCENLGLNEVEVMTEDDADVAEFTYDTEVQWERVDLPDEILEIRDLINEV----- 237
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCG----ALH 342
+++L ++K A S L + K+LN + ++ + N G + H
Sbjct: 238 -ITDRLEDLKELGVTKATSPDL--------SQKKLNGMRAELQKLINNDQSEGYQGMSTH 288
Query: 343 ASYILLSGDETMRNELIEAEG---------NTIDDSLCRFASQASEVFAAICRRDGIASD 393
A + L EL+E + +D+ AS+AS+ + R
Sbjct: 289 AEIMKLR----RAVELVETQSVESVRRYFERQREDARSSGASKASQRMVSDPRVRRAMRK 344
Query: 394 LSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL----QNLKF 449
+ L F ++L + T + + I+F TA AL+ L + KF
Sbjct: 345 AESFDGLHPKFSQARIL----LAQTLGIGDGERVILFTESRDTAEALTEFLGQSFETRKF 400
Query: 450 LASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
+ G G M++ + L+ FR GE +LV+T V EEGLD+ LV+ +
Sbjct: 401 VGQ-------GDKQGSDGMTQTQQQERLDAFRDGEFEVLVSTSVAEEGLDVPEVDLVLFY 453
Query: 510 DLPETVASFIQSRGR 524
+ T IQ +GR
Sbjct: 454 EPVPTAIRSIQRKGR 468
>gi|14520497|ref|NP_125972.1| Hef nuclease [Pyrococcus abyssi GE5]
gi|5457712|emb|CAB49203.1| Putative ATP-dependent ERCC4-like helicase [Pyrococcus abyssi GE5]
Length = 752
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 229/539 (42%), Gaps = 81/539 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-YELAHLIRKPQKSICIFLAPTVALV 118
R YQ + K E N ++ L TG GKT IA+++ Y L K + LAPT LV
Sbjct: 14 RLYQELIYAKCKERNCLIVLPTGLGKTIIAMMIADYRLNKYGGK-----VLMLAPTKPLV 68
Query: 119 QQQAKVIEESIGF---KVRTFCGG---SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
Q A+ + K+ G S+R+K+ W ++ +V++ PQ + L
Sbjct: 69 LQHAETFRKFFNLPPEKIVALTGEVSPSERVKA---W----NRAKVIIATPQTVENDLLT 121
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
I +E + L+IFDE H A N+ Y I +++ + K P + G+TASP G+S
Sbjct: 122 GKINLEDVVLVIFDEAHRAV--GNYAYVYIAREYL--NQAKNPHVIGLTASP----GSSQ 173
Query: 233 QANLPKSINSLENL-LDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
+ K + L NL ++ Y E++ D++ P V+ ++ + + Y +
Sbjct: 174 E----KILEVLRNLGIEHIEYRSENSPDVK-----PYVQGIKFEWIKVELPGLYKEVRKL 224
Query: 292 LAEIKREQY--------ISALSRKLHDHQSLR------NTTKQLNRLHDSMKFCLENLGV 337
L ++ R+ I + S L + LR T + N HD K L +
Sbjct: 225 LRDMLRDSLKPLAEAGLIESASADLPKKEILRAGQIINEETAKGN--HDLRKLLLFHAMA 282
Query: 338 CGALHASYIL----LSGDETMRNELIE--AEGNTIDDSLCRFASQASEVFAAICRRDGIA 391
HA +L LS +L E G+T + + A + + +
Sbjct: 283 LKLHHAIELLETQGLSALRVYLKKLYEEAKTGSTRASKELFLDRRMKKALALLIQAKELG 342
Query: 392 SDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLA 451
D +EVLKE ++L + +++ K IVF N TAR + L
Sbjct: 343 IDHPKMEVLKE-LVKEQLSK----------KENSKIIVFTNYRETARKVVEELTK----E 387
Query: 452 SWRCHFLVG--VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRF 509
+ VG + MS+ K IL+ F GE N+LVAT VGEEGLD+ LV+ +
Sbjct: 388 GIKAKRFVGQATKENDRGMSQREQKLILDSFARGEFNVLVATSVGEEGLDVPEVDLVVFY 447
Query: 510 D-LPETVASFIQSRGR-ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTS 566
+ +P + S +Q RGR R L+ G + E SK ++R RE + S
Sbjct: 448 EPVPSAIRS-VQRRGRTGRQKPGRVVILIAQGTRDEAYYWS--SKHKERQMRETIRMVS 503
>gi|239610437|gb|EEQ87424.1| dicer-like protein 2 [Ajellomyces dermatitidis ER-3]
Length = 1509
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 43/242 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHI-------------------AVLLIYELAHLI 100
R YQLE+ + ++ ENII+ + TG GKT + +L I+ I
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVVPTHELEIDAQVLNYFSDLTILWIFRAILRI 107
Query: 101 RKPQKS-----ICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKE 152
R ++ + FLAPTVAL QQ K I + + ++ R G + W+
Sbjct: 108 RHELETCAAHKLVWFLAPTVALADQQHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDI 167
Query: 153 IDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM 212
+ ++V PQ+LL + H F+ M IALL+FDE HH N +M+ FY +
Sbjct: 168 LLNIRIVVSTPQVLLDAMTHGFVTMSRIALLVFDEAHHC--AENEAPNILMQRFYHEQLQ 225
Query: 213 K------VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVS 265
+ +P I G+TASP+ PK + +E+ L+++ + E+L +V
Sbjct: 226 RTGTANDLPHILGLTASPITKVD-------PKYLMKIEHNLNSRCETPRIHREELMRYVH 278
Query: 266 SP 267
P
Sbjct: 279 RP 280
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 167/426 (39%), Gaps = 92/426 (21%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L PSIMH++E L+A +L + A +++ A++ +E + +R+E LGD
Sbjct: 977 LTPSIMHKVEIYLIAEQLNKTI---LKPVAFTDLSLVVTAISASVAREATNYQRIEFLGD 1033
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ L + EG L+R + N V+N L A L +I F
Sbjct: 1034 SILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYAAVETGLDKFIL------VDVF 1087
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ PR E S+ G ++ KT+ADVVEAL+GA
Sbjct: 1088 TGAKWRPRYNKVHLE----SEEQGIPQREMTT-------------KTLADVVEALLGAAT 1130
Query: 1168 DDSG----FKAATAFL---KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLG 1220
+ G K FL +W+ A + N + + S +E LLG
Sbjct: 1131 IEGGETKTEKCLEIFLPEIRWMPFDDRINA--LYNSVPEAYENIRTSW---FQEIESLLG 1185
Query: 1221 HQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+ F + L+QAF HPS YQRLEF+GDA+LD++I +L++ L + +
Sbjct: 1186 YSFNKKVFLVQAFTHPSNPGSTTSSYQRLEFVGDAILDHIIVHHLFNSSRNLPHFDMHLM 1245
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV------KEGP 1333
R+ L N A + + S SE + + +T +TR+V + G
Sbjct: 1246 RTALANADFLAFLCIGMS-------TEQARSEVVESSKKNTVTSLTTRKVFLWQYMRHGT 1298
Query: 1334 ----------------------------------------RCPKVLGDLVESSLGAILLD 1353
R K DL+ES LGAI +D
Sbjct: 1299 SWELAAAQQQTADQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAIFID 1358
Query: 1354 SGFNLN 1359
S +L+
Sbjct: 1359 SHGSLD 1364
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
++ RSG+ NLLVAT V EEG+D+ C LV+ FD + SFIQ RGRAR +S++ +
Sbjct: 501 IDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFVIFL 560
Query: 537 DSGNQRE-------LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY-KVDSSGACIS 588
+ ++ + D++K+ +E+ R I + + +E Y +++S+GA ++
Sbjct: 561 NGDDKSQEKKWNKMEDVMKSMYEEDMRRLENIWAIENIEEEADEKENEYLRIESTGALLT 620
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTIC-HIILPA--NAPIHQIVGTPQ 644
L +C+ L D F + +P F Y + + GG + +ILP + I G+
Sbjct: 621 FENARPHLEHFCATLQCD-FTDTRPVFLYSESEPGGMVTGKVILPNVLDPKFRVIRGSKW 679
Query: 645 SSME-AAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
E A++DA +A L++ G +ND LLP ED + +S S
Sbjct: 680 WRRERMAQRDAAFQAYVKLYREGLVNDNLLPIHWMPVEDPALEYSEKRPS 729
>gi|261195592|ref|XP_002624200.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239588072|gb|EEQ70715.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
Length = 1509
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 43/242 (17%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHI-------------------AVLLIYELAHLI 100
R YQLE+ + ++ ENII+ + TG GKT + +L I+ I
Sbjct: 48 RAYQLEMLEASLRENIIIAMDTGSGKTQVVPTHELEIDAQVLNYFSDLTILWIFRAILRI 107
Query: 101 RKPQKS-----ICIFLAPTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKE 152
R ++ + FLAPTVAL QQ K I + + ++ R G + W+
Sbjct: 108 RHELETCAAHKLVWFLAPTVALADQQHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDI 167
Query: 153 IDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM 212
+ ++V PQ+LL + H F+ M IALL+FDE HH N +M+ FY +
Sbjct: 168 LLNIRIVVSTPQVLLDAMTHGFVTMSRIALLVFDEAHHC--AENEAPNILMQRFYHEQLQ 225
Query: 213 K------VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVS 265
+ +P I G+TASP+ PK + +E+ L+++ + E+L +V
Sbjct: 226 RTGTANDLPHILGLTASPITKVD-------PKYLMKIEHNLNSRCETPRIHREELMRYVH 278
Query: 266 SP 267
P
Sbjct: 279 RP 280
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 167/426 (39%), Gaps = 92/426 (21%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L PSIMH++E L+A +L + A +++ A++ +E + +R+E LGD
Sbjct: 977 LTPSIMHKVEIYLIAEQLNKTI---LKPVAFTDLSLVVTAISASVAREATNYQRIEFLGD 1033
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK+ L + EG L+R + N V+N L A L +I F
Sbjct: 1034 SILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYAAVETGLDKFIL------VDVF 1087
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
+ PR E S+ G ++ KT+ADVVEAL+GA
Sbjct: 1088 TGAKWRPRYNKVHLE----SEEQGIPQREMTT-------------KTLADVVEALLGAAT 1130
Query: 1168 DDSG----FKAATAFL---KWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLG 1220
+ G K FL +W+ A + N + + S +E LLG
Sbjct: 1131 IEGGETKTEKCLEIFLPEIRWMPFDDRINA--LYNSVPEAYENIRTSW---FQEIESLLG 1185
Query: 1221 HQFLHRGLLLQAFVHPSF-NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDL 1279
+ F + L+QAF HPS YQRLEF+GDA+LD++I +L++ L + +
Sbjct: 1186 YSFNKKVFLVQAFTHPSNPGSTTSSYQRLEFVGDAILDHIIVHHLFNSSRNLPHFDMHLM 1245
Query: 1280 RSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV------KEGP 1333
R+ L N A + + S SE + + +T +TR+V + G
Sbjct: 1246 RTALANADFLAFLCIGMS-------TEQARSEVVESSKKNTVTSLTTRKVFLWQYMRHGT 1298
Query: 1334 ----------------------------------------RCPKVLGDLVESSLGAILLD 1353
R K DL+ES LGAI +D
Sbjct: 1299 SWELAAAQQQTANQYQKLQADISEALEKSNTYPWTLLSRLRAQKFFSDLIESVLGAIFID 1358
Query: 1354 SGFNLN 1359
S +L+
Sbjct: 1359 SHGSLD 1364
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 14/230 (6%)
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
++ RSG+ NLLVAT V EEG+D+ C LV+ FD + SFIQ RGRAR +S++ +
Sbjct: 501 IDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFVIFL 560
Query: 537 DSGNQRE-------LDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY-KVDSSGACIS 588
+ ++ + D++K+ +E+ R I + + +E Y +++S+GA ++
Sbjct: 561 NGDDKSQEKKWNKMEDVMKSMYEEDMRRLENIWAIENIEEEADEKENEYLRIESTGALLT 620
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTIC-HIILPA--NAPIHQIVGTPQ 644
L +C+ L D F + +P F Y + + GG + +ILP + I G+
Sbjct: 621 FENARPHLEHFCATLQCD-FTDTRPVFLYSESEPGGMVTGKVILPNVLDPKFRVIRGSKW 679
Query: 645 SSME-AAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
E A++DA +A L++ G +ND LLP ED + +S S
Sbjct: 680 WRRERMAQRDAAFQAYVKLYREGLVNDNLLPIHWMPVEDPALEYSEKRPS 729
>gi|348585927|ref|XP_003478722.1| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Cavia porcellus]
Length = 1022
Score = 93.6 bits (231), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 415 ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCHFLVGV--NAGLKSMS 469
IL F R ++ + I+F +A ALS +I +N KF + H L+G ++ K M+
Sbjct: 705 ILEQFTRTEKPTRGIIFTKTRQSAYALSQWIAENEKFADVGIKAHHLIGAGHSSEFKHMT 764
Query: 470 RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQ 529
+N K ++ KFR+G++NLL+AT V EEGLDI+ C ++IR+ L + +Q+RGRAR +
Sbjct: 765 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIIIRYSLVTNEIAMVQARGRARAEE 824
Query: 530 SEYAFLVDSG 539
S Y + SG
Sbjct: 825 STYVLVAHSG 834
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 49/280 (17%)
Query: 21 CAATSAVVE------ECSVAVSGVGFGAESSVGAQK----TDKDPKQIA----------- 59
CA +SA+ E E SV+ G S++G+ +D D + +A
Sbjct: 250 CADSSALSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENVAKRASPEPELKL 309
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTV 115
R YQ+E+ + A+E +NII+ L TG GKT +AV + + HL +K Q S I L V
Sbjct: 310 RSYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKD--HLDKKGQASEPGKVIVLVNKV 367
Query: 116 ALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR-- 173
LV+Q + K G S + + + + ++V++ QIL L +
Sbjct: 368 MLVEQLFTKEFKPFLKKWYRVTGLSGDTQLKISFPEVVKSHDVIISTAQILENSLLNSES 427
Query: 174 ----FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK------------PDIMKVPRI 217
+++ +L+I DECHH + Y IM+ + K ++ +P+I
Sbjct: 428 GEDAGVQLSDFSLIIIDECHHTNKED--VYNNIMRRYLKQKLKNKALQKENKSVVPLPQI 485
Query: 218 FGMTASPVVGKGASAQANLPKSINSLENLLDAK-VYSVED 256
G+TASP VG GA+ QA + I + LDA + +V+D
Sbjct: 486 LGLTASPGVG-GATKQAKAEEHILKICANLDASTIKTVKD 524
>gi|449507056|ref|XP_002194080.2| PREDICTED: interferon-induced helicase C domain-containing protein
1-like [Taeniopygia guttata]
Length = 1033
Score = 93.6 bits (231), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
Query: 406 SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARAL-SYILQNLKFL-ASWRCHFLVGV- 461
++KL++L ++ F + + IVF ++A AL +I N KF + H+L+G
Sbjct: 704 NEKLMKLRNTLMEEFTKTEEPRGIVFTKTRLSAFALFQWIKDNPKFEEVGIKAHYLIGSG 763
Query: 462 -NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ +K M++N + +++KFR G +NLL+AT V EEGLDI+ C +VIR+ L + +Q
Sbjct: 764 HKSEMKPMTQNEQREVIDKFRCGNVNLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQ 823
Query: 521 SRGRARMPQSEYAFLV--DSG 539
+RGRAR +S YA +V DSG
Sbjct: 824 ARGRARADESTYALVVSSDSG 844
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 51/285 (17%)
Query: 25 SAVVEECSVA-----VSGVGFGAESSVGAQKTDKD---------PKQIARKYQLELCKKA 70
++VV E V+ VS E S +D+D P R YQ+E+ K A
Sbjct: 279 NSVVSESDVSIGHGGVSNSNENLEQSSTTSDSDEDEVERRASPEPDLTLRDYQMEVAKPA 338
Query: 71 ME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVALVQQQAKVIE 126
+ ENII+ L TG GKT +AV + + HL +K + S I L V LV+Q K
Sbjct: 339 LNGENIIICLPTGSGKTRVAVYITKD--HLDKKKRASEPGKVIVLVNKVPLVEQHLKT-- 394
Query: 127 ESIGFKVRTF----CGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH------RFIK 176
E F R + G +LK + + + + +V++ QIL L + +
Sbjct: 395 EFSPFLKRWYQVIGLSGDSQLK--ISFPEVVRRNDVIISTAQILENSLLNASKEDEESVH 452
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD------------IMKVPRIFGMTASP 224
+ +L+I DECHH Q + Y IM+ + K ++ P+I G+TASP
Sbjct: 453 LSDFSLIIIDECHHTQKEG--VYNNIMRRYLKEKMKNRKLAKENKPLIPQPQILGLTASP 510
Query: 225 VVGKGASAQANLPKSINSLENLLDA-KVYSVED-AEDLESFVSSP 267
VG GA++ + + I + LDA ++ +VE+ A L++ V P
Sbjct: 511 GVG-GATSYSKAEEHILKICANLDACRIMTVEEHASQLKNQVKEP 554
>gi|167046018|gb|ABZ10540.1| dicer-like protein A [Placozoa sp. DMJ-2008]
Length = 351
Score = 93.6 bits (231), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 56/368 (15%)
Query: 1033 CQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNL 1092
+E+ + +++ +G F+K + +L+ + LT +R + L LAA+ N+
Sbjct: 4 AEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNI 63
Query: 1093 QVYIRDQPFD--PCQF---FALGRRCPRICSKET---ERTIHSQYDGRAPDDLNAEVRCS 1144
YI +PF+ C F RC S ++ ERTI S
Sbjct: 64 PSYIISKPFNQLKCWIPPGFTFSIRCKDDSSSDSALAERTIIE----------------S 107
Query: 1145 KGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFL 1204
++L K+IA+ + A+VGA + FLKW+G +E +S + ++
Sbjct: 108 ITDNFLSVKSIAECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSISNGFDVWNEKIT 167
Query: 1205 PL-SASLDMATLEIL------LGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAV 1255
+ S + LE L LG++F++ L+ AF H S + G Y++LEF+GD++
Sbjct: 168 HMIQESNSQSWLEKLHKFEENLGYKFINIDYLILAFTHSS-SEFGDSFNYEKLEFVGDSI 226
Query: 1256 LDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI-- 1313
L+YL+ YL+ + + + ++N+ + ++ +F+ L + S + E I
Sbjct: 227 LNYLVIKYLFLATDQ-DITRSKFFYGIAISNEVYGLLSYAYNFHH-LFYQSPFVKEMILG 284
Query: 1314 -----------------NNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGF 1356
N D++ T S + + + PK L D+ ES AI DSG
Sbjct: 285 FEKKTADLLEGGSIPRNGNKHDWVYTIFS-KSIDDDFSIPKELADVFESLAAAIYFDSGQ 343
Query: 1357 NLNTVWKI 1364
NL+TVW I
Sbjct: 344 NLSTVWNI 351
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,529,956,932
Number of Sequences: 23463169
Number of extensions: 1039843206
Number of successful extensions: 2458198
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15003
Number of HSP's successfully gapped in prelim test: 5286
Number of HSP's that attempted gapping in prelim test: 2414211
Number of HSP's gapped (non-prelim): 37712
length of query: 1601
length of database: 8,064,228,071
effective HSP length: 157
effective length of query: 1444
effective length of database: 8,675,477,834
effective search space: 12527389992296
effective search space used: 12527389992296
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 84 (37.0 bits)