BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000380
(1601 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2
Length = 1702
Score = 1754 bits (4544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1592 (56%), Positives = 1134/1592 (71%), Gaps = 46/1592 (2%)
Query: 50 KTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICI 109
K +KDP++IAR+YQ+ELCKKA EEN+IVYLGTGCGKTHIAV+LIYEL HL+ P+KS+CI
Sbjct: 115 KMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPKKSVCI 174
Query: 110 FLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
FLAPTVALV+QQAKVI +S+ FKV CGG + +KSH +WE+EI EVLVM PQILL+
Sbjct: 175 FLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAANEVLVMTPQILLHN 234
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG 229
L H FIKME I+LLIFDECHHAQ +SNHPYA+IMK FYK + ++ PRIFGMTASPVVGKG
Sbjct: 235 LQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPRIFGMTASPVVGKG 294
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS 289
+ NL KSINSLENLL+AKVYSVE L+ FVSSP+V+VY Y ++D S S +
Sbjct: 295 SFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDASQSTIRYE 354
Query: 290 EQLAEIKREQYIS-ALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILL 348
L +IK+ S L H Q+L + + L R HD++ + L NLG+ GA+ A+ I L
Sbjct: 355 NMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQL 414
Query: 349 SGDETMRNELIEAEGNTIDDSLC-RFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSK 407
+ D +++E + G +C + S A+E ++ +D ASDL + LKEP FS+
Sbjct: 415 NSDHNVQDEPV---GKNPKSKICDTYLSMAAEALSSGVAKDENASDLLSLAALKEPLFSR 471
Query: 408 KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKS 467
KL++LI ILS FRL+ HMKCI+FVNRIVTAR LS IL NL+ L SW+ FLVG+++GLKS
Sbjct: 472 KLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKS 531
Query: 468 MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARM 527
MSR +M++IL++F+S ELNLLVATKVGEEGLDIQTCCLVIR+DLPETV SFIQSRGRARM
Sbjct: 532 MSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARM 591
Query: 528 PQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACI 587
PQSEYAFLVDSGN++E+DLI+NF EDRMN EI R+S + +E +YKV +GACI
Sbjct: 592 PQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLDEELYKVHETGACI 651
Query: 588 SAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTICHIILPANAPIHQIVGTPQS 645
S G +SLL++YCS+LPHDEFF PKP+F + D+ GGTIC I LPANAPI +I +
Sbjct: 652 SGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPANAPISEIESSLLP 711
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEG-SRGELH 704
S EAAKKDACLKA+ +LH LG LND+LLP + EDE D D+ +GEG SRG+L+
Sbjct: 712 STEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCSRGDLY 771
Query: 705 EMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLH 764
EM VP + +Q W S V L+ Y++ F+P PADRIY++FG F+KS LP EAE + +DLH
Sbjct: 772 EMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKSPLPVEAETMDIDLH 831
Query: 765 LARGRSVMTKLVPSGIMQ--------AQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESS 816
LA RSV K+ PSG+ + A+ FQE+ LKV+ +R E +FVPL D +S
Sbjct: 832 LAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIPDFVPLELQDSSRTS 891
Query: 817 SSTFYLLLPVIFHKN----SVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS 872
STFYLLLP+ H SVDW IR CLSSP+F TP V+ PS L+L NG
Sbjct: 892 KSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIFPPSGSHLKLANGCW 951
Query: 873 SESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQP 932
+ DV+NSLV+ T+ K FY V +I +NG+SP K+S + SHV+ + YG+ LKHP QP
Sbjct: 952 NIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESIYKLYGVELKHPAQP 1011
Query: 933 LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSI 992
LLR KPL +RNLLHNR + E EL+EYF ++PPEL LKI G SKDIGSSLSLLPSI
Sbjct: 1012 LLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPSI 1071
Query: 993 MHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKY 1052
MHR+ENLLVAIELKH+LSAS PE AEVS +L+ALTTEKC ER SLERLE+LGDAFLK+
Sbjct: 1072 MHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLKF 1131
Query: 1053 AVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRR 1112
AV RHLFL HD++DEGELTRRRSN VNNSNL +LA + NLQVYIRDQ DP QFFA G
Sbjct: 1132 AVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGHP 1191
Query: 1113 CPRICSKETERTIHS-QYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSG 1171
C C + + +HS D + E+RCSKGHHWL+KKTIADVVEALVGAF+ DSG
Sbjct: 1192 CRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSG 1251
Query: 1172 FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQ 1231
FK A FLKWIG+ V+FE+ QV + CI+S+ +LPL+ ++ TLE L ++FLH+GLL+Q
Sbjct: 1252 FKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLENQLDYKFLHKGLLVQ 1311
Query: 1232 AFVHPSFNRL-GGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
AF+HPS+NR GGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPGQLTDLRS+ VNN+A A
Sbjct: 1312 AFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALA 1371
Query: 1291 NVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAI 1350
NVAV S +FL +S L E I +Y +++ + EGPRCPKVLGDLVES LGA+
Sbjct: 1372 NVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCPKVLGDLVESCLGAL 1431
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLA 1410
LD GFNLN VW +MLSFLDP+ SNLQ++PI+EL+ELC SY D + + KK G F
Sbjct: 1432 FLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGAFTV 1491
Query: 1411 EAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSE 1470
E KVT + +SA N ++E + A+Q + + LKA + + LE +LK+ ++E
Sbjct: 1492 ELKVTKNGCCLTVSATGRN--KREGTKKAAQLMITNLKAHENITTSHPLEDVLKNGIRNE 1549
Query: 1471 ARLIGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGS----------PSLT------- 1513
A+LIGY+E PI+VV E L I E GG+S S PS T
Sbjct: 1550 AKLIGYNEDPIDVVDLVGLDVENLNILETFGGNSERSSSYVIRRGLPQAPSKTEDRLPQK 1609
Query: 1514 ----TGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKI 1568
GG +++A+S L+E C ANCWKPP F+CC+EEG HLK F ++VI+E+E AP
Sbjct: 1610 AIIKAGGPSSKTAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMT 1669
Query: 1569 IECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
+EC GE +A KKGAAEHAA+ +WCL+ G+L
Sbjct: 1670 LECYGEARATKKGAAEHAAQAAIWCLKHSGFL 1701
>sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica
GN=DCL4 PE=2 SV=1
Length = 1657
Score = 1479 bits (3830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 825/1643 (50%), Positives = 1067/1643 (64%), Gaps = 112/1643 (6%)
Query: 53 KDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLA 112
KDP+ IARKYQL+LCK+A+EENIIVYLGTGCGKTHIAVLLIYEL HLIRKP + +CIFLA
Sbjct: 24 KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLA 83
Query: 113 PTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
PT+ LV+QQA VI S FKV+ + G K + H +WE ++ ++EVLVM PQILL L H
Sbjct: 84 PTIPLVRQQAVVIASSTDFKVQCYYGNGKNSRDHQEWENDMREFEVLVMTPQILLQSLRH 143
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGKG-- 229
FIKM IALLI DECHHAQ + HPYA+IMK+FY + + K PR+FGMTASP++GKG
Sbjct: 144 CFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASPIIGKGVM 203
Query: 230 ------------------------ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVS 265
S + N K INSLE LL AKV SV D E+LES V+
Sbjct: 204 PSHSFTEKGGRSPCQPLIFFLPKGGSNKLNYTKCINSLEELLHAKVCSV-DNEELESVVA 262
Query: 266 SPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLH 325
SP + VY YGPV + S+ C ++L +K Q L L D + + K L RLH
Sbjct: 263 SPDMEVYFYGPV--NHSNLTTICIKELDSLKL-QSERMLRASLCDFKDSQKKLKSLWRLH 319
Query: 326 DSMKFCLENLGVCGALHASYILLS--GDETMRNELIEAEGNTIDDSLCRFASQASEVFAA 383
+++ FCL+ LG GAL A+ LS GD+ R E+ ++ S FA +
Sbjct: 320 ENIIFCLQELGSFGALQAARTFLSFDGDKLDRREV------DLNGSTSSFAHHYLNGATS 373
Query: 384 ICRR---DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
I R DG + +E L+EPFFS K LI +LS + LQ++MKCIVFV RI ARA+
Sbjct: 374 ILSRNKTDGSHAGSFDLEKLEEPFFSNKFSVLINVLSRYGLQENMKCIVFVKRITVARAI 433
Query: 441 SYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
S ILQNLK L W+C FLVG ++G K+MSRN M +I+++F SGE+NLLVAT VGEEGLDI
Sbjct: 434 SNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDI 493
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE 560
QTCCLV+RFDLPETVASFIQSRGRARM +S+Y L++ NQ L+ + E MN E
Sbjct: 494 QTCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEE 553
Query: 561 IMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDD 620
I RTS+D F C EE IY+VD++GA IS VSLLH YC LP D FF P P F+Y D
Sbjct: 554 IDSRTSNDMFDCLEENIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFYIDG 613
Query: 621 LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNAT 680
+ G IC +ILP NA Q G P S + AK+DACLKA LHKLGAL D+LLP +
Sbjct: 614 IEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRK 673
Query: 681 EDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRI 740
+ +S ++ E + R ELHEML+PAVL+ S K L+FY+++FIP P DR
Sbjct: 674 NKVSVTNNSSNNKVEDDSLREELHEMLIPAVLKPSGLKLDSLSNLHFYYVKFIPIPEDRR 733
Query: 741 YREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLK 792
Y+ FGLFV + LP EAE L+VDLHLARGR V + G +M A +FQEM LK
Sbjct: 734 YQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIAFEKEKMMLAHKFQEMCLK 793
Query: 793 VILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPV----IFHKNSVDWKIIRRCLSSPVFG 848
++LDRSEF S V LG D E +STFYLLLP+ + +DW + RCLSSP+F
Sbjct: 794 ILLDRSEFTSPHVKLGNDVTLE-INSTFYLLLPIKQKCYGDRFMIDWPAVERCLSSPIFK 852
Query: 849 TPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKD 908
P S S+ L+L +G S++DV S+V++ H F+ V I+ E N +S +
Sbjct: 853 DPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINAWSEH-- 910
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLE--DSESHELEEYFDDL 966
+++ +H + I L HP+QPLL+AK +F LRNLLHNR E +SE EL E+F +L
Sbjct: 911 -SGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGRELLEHFVEL 969
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
PPELC LK+IGFSKD+GSSLSLLPS+M+RLENLLVAIELK ++ +SFPE +++SA +L+
Sbjct: 970 PPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILE 1029
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALTTEKC ER SLER E+LGDAFLKY VGRH F+ ++ +DEG+LTRRRS+ VNNS+L +L
Sbjct: 1030 ALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYEL 1089
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
+ R LQVYIRDQ F+P QFFA GR C +C+ + E +H Q D + N +RC++
Sbjct: 1090 SIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRLH-QMDIHPDNRENCNLRCTRS 1148
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
HHWLH+K IADVVE+L+GAF+ + GFKAA AFL WIGI V+F + + SS L L
Sbjct: 1149 HHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSL 1208
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNR-LGGCYQRLEFLGDAVLDYLITSYLY 1265
D+A LE L+G++F H+GLLLQAFVHPSF++ GGCYQRLEFLGDAVL+Y+ITSYLY
Sbjct: 1209 MDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLY 1268
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
S YP +KPGQ+TDLRS+ V N + A AV++S +K LI DSN L+ I+ + Y+ +S
Sbjct: 1269 STYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNS 1328
Query: 1326 TREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRE 1385
+++ E P CPK LGD+VES +GA+LLDSGFNLN VWK+ML L P+L F+N+ NP+RE
Sbjct: 1329 EKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRE 1388
Query: 1386 LLELCNSYDLDLQFPS-LKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLF 1444
L ELC + +L P +K G++ + +V K K I A N + K A + A+Q+
Sbjct: 1389 LRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSK--IIICTAANRNSKAARKFAAQETL 1446
Query: 1445 SKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVA-----------ADDNV-FE 1492
SKLK GY + KSLE IL + K E+ LIGY+E PI+V A ++N+ F+
Sbjct: 1447 SKLKNYGYKHRNKSLEEILIVARKRESELIGYNEDPIDVEADISVKMKSPHIHEENIPFQ 1506
Query: 1493 KLKISEPQ----------GGSSCDIGS-----PSLTT-------------------GGLQ 1518
+ S + G D+ + P L T G +
Sbjct: 1507 NTETSFTRSSKFHNQIIAGSGKHDVNNGRNNQPKLATQSGRLPSEATEKSNKKVYHGDMV 1566
Query: 1519 NRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIE-APEKIIECIGEPQA 1577
+++ARS L+ELCAAN WKPP F CKEEG SHL+ FT++V+VEI+ A ++EC + +
Sbjct: 1567 HKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKL 1626
Query: 1578 KKKGAAEHAAEGMLWCLEREGYL 1600
+KK A EHAA+G LWCL++ G+L
Sbjct: 1627 QKKAAQEHAAQGALWCLKQLGHL 1649
>sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica
GN=DCL3A PE=2 SV=1
Length = 1651
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/1675 (33%), Positives = 848/1675 (50%), Gaps = 159/1675 (9%)
Query: 43 ESSVGAQKTDKDPKQ--IARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
E G QK K Q R+YQL++ + AM N I L TG GKT IAV+LI E +
Sbjct: 14 EHEAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKIN 73
Query: 101 R-KPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK-SHCDWEKEIDQYEV 158
R K + IFLAPTV LV QQ +VIE F+V + G + + W+++I +Y+V
Sbjct: 74 RTKNAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRWQEQISKYQV 133
Query: 159 LVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIF 218
+VM PQ+ L L + F+ +++++L+IFDECHHA NHPY +IMK+FY K P +F
Sbjct: 134 MVMTPQVFLQALRNAFLILDMVSLMIFDECHHAT--GNHPYTRIMKEFYHKSEHK-PSVF 190
Query: 219 GMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP--VVRVYQYGP 276
GMTASPV+ KG S+ + LENLLDAK+Y+V D E++E V S + R Y P
Sbjct: 191 GMTASPVIRKGISSHLDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKP 250
Query: 277 VINDTSSSYVTCSEQLAEI--KREQYISALSRKLHD-HQSLRNTTKQLNR-LHDSMK--- 329
V + SE+L + K + I+ L K D ++ + TK+ R L S+
Sbjct: 251 V------CFEDLSEELGVLCSKYDALITELQNKRSDMYKDADDITKESKRRLSKSIAKIC 304
Query: 330 FCLENLGVCGALHASYILL--SGDETMRNELIEAEGNTIDDSLCRFASQAS--------E 379
+CL+++G+ A A+ I + ++ E+++A D + R ++ S E
Sbjct: 305 YCLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEE 364
Query: 380 VFAAICRR--DGI----ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNR 433
I +R GI S+ C+E K + S KL LI I +F +H +C++FV+R
Sbjct: 365 ALHLIDKRLQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDR 424
Query: 434 IVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKV 493
+TAR + +++ + LA + FL G + + +++ K L+ FRSG++NLL T V
Sbjct: 425 KITARVIDRMIKKIGHLAHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDV 484
Query: 494 GEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKE 553
EEG+ + C VIRFDLP T S++QSRGRAR S+Y +++ GN ++ DLI +
Sbjct: 485 AEEGIHVPECSCVIRFDLPRTTRSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRS 544
Query: 554 EDRMNREIMDRTS---SDAFTCSEE-RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
E M + R S S F +EE Y V ++GA ++A +S+++RYC KLP D+ +
Sbjct: 545 ETSMVKIASSRESGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCY 604
Query: 610 NPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALN 669
+PKP F + G +C + LP +A + +VG +M AK+ CL A + LH+LGAL+
Sbjct: 605 SPKPTFEFTHHDDGYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALD 664
Query: 670 DYL-LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFY 728
D+L L ED P + S + + G R ELH +W + ++L Y
Sbjct: 665 DHLCLSVEDPV----PEIVSKNKGTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSY 720
Query: 729 FMQFIPDPADRIYREFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIM------- 781
M F+ D A +IY EF L + + LP E L++DL+L + V T + G++
Sbjct: 721 KMNFVCDQAGQIYSEFVLLIDATLPDEVATLEIDLYL-HDKMVKTSVSSCGLLELDAQQM 779
Query: 782 -QAQQFQEMFLKVILDRSEFNSEFVP-------LGKDDYCESSSSTFYLLLPV--IFHKN 831
QA+ FQ + + + F VP L K+D ++++ YLLLP F N
Sbjct: 780 EQAKLFQGLLFNGLFGKL-FTRSKVPNAPREFILNKEDTFVWNTASVYLLLPTNPSFDSN 838
Query: 832 -SVDWKIIRRCLSSPVFGTPGGSVDRKSL-------PSHGPL-QLHNGWSSESDVENSLV 882
++W +I ++ S +++ L + G L L N + +++ +V
Sbjct: 839 VCINWSVIDAAATAVKLMRRIYSENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVV 898
Query: 883 YATHKKWFYLVTNIV-----FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAK 937
A H Y +I +G S K+ + ++ YGI L+HP QPLL K
Sbjct: 899 LAVHTGKIYTALDITELSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLK 958
Query: 938 PLFRLRNLLHNRKLEDSESHELEEYFDD------------LPPELCQLKIIGFSKDIGSS 985
P NLL + K D E + +E + +PPEL L + +I S
Sbjct: 959 PSHNPHNLL-SSKFRD-EGNVVENMSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILRS 1014
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
L P++M+R+E+L +A +L+ + S + +S+ ++L+A+TT +C E FS+ERLE+L
Sbjct: 1015 FYLFPALMYRIESLTLASQLRSEIGYS---DSNISSFLILEAITTLRCSEDFSMERLELL 1071
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LKYAV HLFL DEG+L+ R + + N+ L KL N+Q Y+RD FDP +
Sbjct: 1072 GDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRR 1131
Query: 1106 FFALGR--------RCPRICSKETERTIHSQYD-----GRAPDDLNAEVRCSKGHHWLHK 1152
+ A G+ CP + S+ IH D G+A C KGH W+
Sbjct: 1132 WLAPGQLSIRPSPCECP-VKSEVVTDDIHIIDDKAIVLGKA---------CDKGHRWMCS 1181
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISS--KSFLPLSASL 1210
KTIAD VEA++GA+ G +AA A LKW+GI E E + +S+ +++LP
Sbjct: 1182 KTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVF 1241
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--CYQRLEFLGDAVLDYLITSYLYSVY 1268
+M LE LG+ F +GLL++A HPS LG CY+RLEFLGDAVLD L+T YL++ +
Sbjct: 1242 EM--LEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSH 1299
Query: 1269 PKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE 1328
G+LTDLRS VNN+ FA VAV +F+ FL S +L + I YV+ + S +
Sbjct: 1300 KDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKV 1359
Query: 1329 --VKEG-PRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRE 1385
+ +G P+ PKVLGD+VES GAILLD+ +L+ VW I L PI+ NL+L P RE
Sbjct: 1360 ELLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRE 1419
Query: 1386 LLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFS 1445
L+E C + + +G +A V + K+V + + RK+A AS L
Sbjct: 1420 LIEWCGKHGYFVGINCRDQGDTVVATLDV--QLKEVLLVRQGFSKKRKDAKAHASSLLLK 1477
Query: 1446 KLKAAGYV-----PKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKISEPQ 1500
L+ G + KT+ E S+ + +T + N + IS+P
Sbjct: 1478 DLEEKGLIIPKNASKTEQFEKHCGSTNPFNNLHVDAMDTQTPKPTKEKNAADSRNISDPL 1537
Query: 1501 GGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFD----------CCKEEGLSH 1550
+G P R LYELC W PT + C G S
Sbjct: 1538 ------LGKPLHVIVKTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSS 1591
Query: 1551 LK----LFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
K F F + + P +I G+ +A KK + + AA +L+ L+R G L
Sbjct: 1592 QKATPQAFAFASTITLHIPNADVISLTGDGRADKKSSQDSAALFLLYELQRRGTL 1646
>sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica
GN=DCL3B PE=2 SV=2
Length = 1637
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/1631 (32%), Positives = 806/1631 (49%), Gaps = 145/1631 (8%)
Query: 64 LELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQ--KSICIFLAPTVALVQQQ 121
+E+ + A+ N I L TG GKT +AV+L E A +R + + I +FLAPTV LV QQ
Sbjct: 44 VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQ 103
Query: 122 AKVIEESIGFKVRTFCGGSKRLKSHCD-WEKEIDQYEVLVMIPQILLYCLYHRFIKMELI 180
+VI E V G S+ + D W++E+ + E++VM PQILL L H F+ M +
Sbjct: 104 FEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAV 163
Query: 181 ALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKSI 240
+LLIFDECH A +HPYA+IMK+FY + P +FGMTASPV KGAS N I
Sbjct: 164 SLLIFDECHRAC--GSHPYARIMKEFYFGSQWR-PDVFGMTASPVATKGASTLHNCEAHI 220
Query: 241 NSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLA---EIKR 297
+ LE LDAK+Y VED +LESF S P ++N +Y+ + L +I
Sbjct: 221 SQLELTLDAKIYIVEDRNELESF-SPPTT-------IVNKYYDAYMVDFDNLKSKLQIFS 272
Query: 298 EQYISAL-------SRKLHDHQSLRNTT-KQLNRLHDSMKFCLENLGVCGALHASYILLS 349
+++ S L S K D ++ T+ K L+R H + + L +LG + S ++
Sbjct: 273 DEFDSLLVGLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLG---PIITSEVVKI 329
Query: 350 GDETMRNELIEAEGNTIDD-SLCRFASQASEVFAAI------CRRDGIASDLSCIEVLKE 402
E+++ L ++E SLC S E + I + + S+ E+ K
Sbjct: 330 HIESVK-PLCDSEDCIFSKASLCLHMSYFKEALSLIEEILPQGYGELMKSESGSEELTKR 388
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
+ S K+ LI I +F + C++FV+RI+TA+A+ ++ + + + +L G +
Sbjct: 389 GYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGS 448
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
++S + L+ FR+G++NLL T V EEG+D+ C VIRFDLP TV S++QSR
Sbjct: 449 TSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSR 508
Query: 523 GRARMPQSEYAFLVDSGN-QRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIY--K 579
GRAR SE+ +++ GN Q++ + + N + ++ ++ S + +Y +
Sbjct: 509 GRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQGMYTYQ 568
Query: 580 VDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQI 639
V S+GA I+A V+L+ +YC KLP D +F PKP F + G C + LP NA I
Sbjct: 569 VQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSI 628
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPM---LFSSDSDSYEG 696
VG SS +K+ L+A + LH+LG LND+L+P +EPM ++D G
Sbjct: 629 VGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVP-----LTEEPMDTDFTTADEKCISG 683
Query: 697 EGS--RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPG 754
G+ R ELH L +W + LN Y + F+ D Y F L ++ L
Sbjct: 684 PGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDD 743
Query: 755 EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQ--------FQEMFLKVILDR-------SE 799
+ K+DL L + V T + P G +Q + FQE F I R S
Sbjct: 744 DVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSG 803
Query: 800 FNSEFVPLGKDDYCESSSSTFYLLLPV-----IFHKNSVDWKIIRRCLSSPVFGTPGGSV 854
+F+ K + ++ + YLLLP+ I S+ W+ I C +
Sbjct: 804 AQRDFI-FKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQG 862
Query: 855 DRKSLPSHGPLQLHNGWSSE-----------SDVENSLVYATHKKWFYLVTNIVFEKNGY 903
D +P + Q G E S +++S+V + H Y V +++ +
Sbjct: 863 DENVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAE 922
Query: 904 SPY------KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNR-KLEDSES 956
+ K S +S VD+ YGI ++HP+QPLL K NLL ++ K D +
Sbjct: 923 DSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGST 982
Query: 957 -----HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA 1011
E E+ +PPEL L + + DI S LLPS++HRL++L++A +L+ +
Sbjct: 983 GKPLLMEKEQIHARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGY 1040
Query: 1012 SFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELT 1071
+ + ++L+A+TT +C E FSLERLE+LGD+ LKY VG LFL + EG+L+
Sbjct: 1041 N----QHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLS 1096
Query: 1072 RRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALG----RRCPRICSKETERT-IH 1126
RS AV N+ L K +LQ Y+RD FDP ++ A G R P C ET H
Sbjct: 1097 DMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSH 1156
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV 1186
+Y P + C +GH W+ KTI+D VEALVGA+ G AA ++W GI +
Sbjct: 1157 RRYIRDDPSFFVGK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDI 1215
Query: 1187 EFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGG--C 1244
+ + + + ++ LS D+ LE L + F +GLLL+A HPS LG C
Sbjct: 1216 KCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYC 1275
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEFLGD+VLD L+T +LY+ + + PG+LTDLRS LV+N+ FA V + + L
Sbjct: 1276 YQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQH 1335
Query: 1305 DSNVLSETINNYV-DYMITPSSTREVKEGPRC--PKVLGDLVESSLGAILLDSGFNLNTV 1361
S +L E I YV + E + C PKVLGD++ES GA+ +D+ FN++ V
Sbjct: 1336 GSGILLEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMV 1395
Query: 1362 WKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDV 1421
W+I L P++ L L P RELLELC+ L KG + + E + +D+
Sbjct: 1396 WEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDE-- 1453
Query: 1422 FISACATNLSRKEAIRIASQQLFSKLKAAGY-----VPKTKSLE---SILKSSPKSEARL 1473
+ A + ++K A A+ ++ + LK G + K K L+ S L+ S
Sbjct: 1454 LLVAQGHDRNKKRAKAKAASRILADLKQQGLSIKQCLSKAKQLDIVTSDLQFDLTSSGTQ 1513
Query: 1474 IGYDETPINVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAAN 1533
+ Y +D N + L +G SS + + ++ RS L++LC
Sbjct: 1514 LSY---------SDLNDYHIL-----EGLSS--VKKEVVLPLKMEKGGPRSALFKLCKIL 1557
Query: 1534 CWKPPTFDCCKE--------EGLSHLKLFTFRVIVEIEAPE-KIIECIGEPQAKKKGAAE 1584
W P F+ ++ +G + +F + + P+ I GE + KK A +
Sbjct: 1558 QWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITLHIPDATTITFQGERRTDKKSAQD 1617
Query: 1585 HAAEGMLWCLE 1595
A+ ML L+
Sbjct: 1618 SASLMMLHKLQ 1628
>sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300
PE=1 SV=2
Length = 1388
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1445 (32%), Positives = 757/1445 (52%), Gaps = 132/1445 (9%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P AR YQ+E +KA+++N IV+L TG GKT IA++L+ A+L RKP C+FL P
Sbjct: 20 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 79
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+ ++ KV + G W++E+D+YEVLVM P ILL L H
Sbjct: 80 VVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHS 139
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI----MKVPRIFGMTASPVVGKG 229
F+ + +I +LI DECHHA K HPYA IM++FY ++ VPRIFGMTAS V KG
Sbjct: 140 FLSLSMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKG 197
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFV--SSPVVRVYQYGPVINDTSSSYVT 287
+ + K I+ LE L+++KVY+ E+ L FV S+P + YQ+ + + +S V
Sbjct: 198 ENLDSYW-KKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVE 256
Query: 288 CSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL 347
E+L IK + L + ++ + K+L R+ ++ +CL++LG+ A A+ L
Sbjct: 257 KLERLT-IKHRLSLGTLDL---NSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL 312
Query: 348 LSGDETMRNELIEAEGNTIDDSLCR-FASQASEVFAAICRRDGIASDLSCIEVLKEP-FF 405
+ + + E N +L + F S AS+ F A + G+ ++ I E
Sbjct: 313 ---SASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQ-GLNWSVANINGNAEAGLL 368
Query: 406 SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN-LKFLASWRCHFLVGVNAG 464
+ K + LI L + ++++CI+FV+R++TA L +L L +W+ ++ G N+G
Sbjct: 369 TLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSG 428
Query: 465 LKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGR 524
L++ +R I+E FR G +N++VAT + EEGLD+Q+C LVIRFD + SFIQSRGR
Sbjct: 429 LQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGR 488
Query: 525 ARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTC------SEERIY 578
ARM S+Y +V+SG+ + + RM E +D + C S+E ++
Sbjct: 489 ARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHS---LVPCPPLPDDSDEPLF 545
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQ 638
+V+S+GA ++ VSL++ YCS+LP DE+F P P+F D G C + LP + P+ +
Sbjct: 546 RVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS--CTLYLPKSCPVKE 603
Query: 639 IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQ----EDNATEDEPMLFSSDSDSY 694
+ +++ + K+ CLKA LHK+GAL+D+L+P E + + E + ++++ Y
Sbjct: 604 V--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTEQPCY 661
Query: 695 EGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPD-PADRIYREFGLFVKSLLP 753
P ++ Q +Q +FY ++ P+ P + + L + +L
Sbjct: 662 ------------FPPELVSQ--FSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLE 707
Query: 754 GEAEHLKVDLHLARGRSVMT-------KLVPSGIMQAQQFQEMFLKVILDRSEFNSEFVP 806
+ + L RG +T L ++ ++FQ +V+LD S N +
Sbjct: 708 DDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHSVEN--LME 765
Query: 807 LGKDDYCESSSSTFYLLLPVIF-HKNS-VDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGP 864
+ + YLL+P H+ S +DW++IR +L SH
Sbjct: 766 ALNGLHLRDGVALDYLLVPSTHSHETSLIDWEVIRSV----------------NLTSHEV 809
Query: 865 LQLHNGWSSESD---------------VENSLVYATHKKWFYLVTNIVFEKNGYSPY--K 907
L+ H S+ V+N+LVY H + Y ++ NG S +
Sbjct: 810 LEKHENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKR 869
Query: 908 DSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLP 967
+S +++++ +GI L +PLL + +F L + LH K + + H+ E F +LP
Sbjct: 870 NSGDQTYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHDRE--FVELP 927
Query: 968 PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKA 1027
PELC + + S D+ S + +PS+M R+E+LL+A LK S P+ + +L+A
Sbjct: 928 PELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLK----KSIPK-VNIPTIKVLEA 982
Query: 1028 LTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLA 1087
+TT+KC+++F LE LE LGD+FLKYAV + LF T EG L+ ++ ++N L +
Sbjct: 983 ITTKKCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFG 1042
Query: 1088 ARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGH 1147
+ LQ +IRD+ F+P + G+ +S + P+ N V +
Sbjct: 1043 CQQKLQGFIRDECFEPKGWMVPGQ----------SSAAYSLVNDTLPESRNIYVASRRN- 1091
Query: 1148 HWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLS 1207
L +K++ADVVE+L+GA++ + G AA F+ W+GI+V+F ++ I S +
Sbjct: 1092 --LKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTK-----IQRDSPIQAE 1144
Query: 1208 ASLDMATLEILLGHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLY 1265
+++ +E LL + F + LL++A H S+ + CYQRLEFLGD+VLDYLIT +LY
Sbjct: 1145 KLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLY 1204
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPS- 1324
YP L PG LTD+RS VNN+ +A VAV + +K +++ S+ L + I+ V S
Sbjct: 1205 DKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSL 1264
Query: 1325 -STREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
ST + PKVLGD++ES GAI +DSG+N V+ + L ++ ++L+P+
Sbjct: 1265 QSTFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPV 1324
Query: 1384 RELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQL 1443
REL ELC + +L K F E K K++ + A +K A ++A +++
Sbjct: 1325 RELTELCQKWQFELS--KAKDFDSFTVEVKA----KEMSFAHTAKASDKKMAKKLAYKEV 1378
Query: 1444 FSKLK 1448
+ LK
Sbjct: 1379 LNLLK 1383
>sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica
GN=DCL2A PE=2 SV=1
Length = 1410
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/1453 (32%), Positives = 731/1453 (50%), Gaps = 140/1453 (9%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLNPH-NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L +++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRL----NKKHIEALDRKLHG-SSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L ++L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA----FT 571
SFIQSRGRARM S+Y LV G+ + F M E + S T
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENT 548
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E+ Y+V+S+ A ++ V L+H +CSKLP DE+FNP P+F D GT C + LP
Sbjct: 549 LCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRF-DIDKASGT-CTLHLP 606
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSD- 690
++P+ + + S+ K+ CLKA ++LH +GAL D LLP+ D ++EP + +
Sbjct: 607 KSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENK 664
Query: 691 --SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF-----MQFIPDPADRIYRE 743
SY P +W RL Y+ ++ P A
Sbjct: 665 IEQPSY-------------FPEEFVDNWRSFS---RLGIYYCYKISLEGCPKTASPTDIL 708
Query: 744 FGL-------FVKS--LLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVI 794
L F S LPG ++ V + + L ++ A++FQ L +
Sbjct: 709 LALKCDLGSDFTSSSFKLPGGQDNASVTMKYVG----IIHLNQEQVIIARRFQTTILSFL 764
Query: 795 L--DRSE-------FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSP 845
+ D E F+ VP+G YLLLP++ +DW ++ SSP
Sbjct: 765 IGDDHLEVSNGIKYFHEMQVPIG----------VVYLLLPLV--SGRIDWCSMKFS-SSP 811
Query: 846 VFGTPGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGY 903
++ + S LQ +G ++NS+V H FY+++ + + N
Sbjct: 812 IYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSC 871
Query: 904 SPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYF 963
P D ++ D+ + +G+ L QPLL ++RN LHN E + Y
Sbjct: 872 LPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHN-CYSKKEKEPGDRYS 930
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
+LPPELC++ + S + S +PSIM R++ +L++++LK L + + +V
Sbjct: 931 VELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQ-FDVPVLK 989
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L
Sbjct: 990 ILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAAL 1049
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
+LA +NL YI + F+P R C ER + + AP+ + ++ +
Sbjct: 1050 CQLACSSNLVGYIHAEEFNP-------RDWIIPCLDYDERD-NKKISFLAPNGMYSQRKM 1101
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSF 1203
S + K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K
Sbjct: 1102 S-----IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKIS 1152
Query: 1204 LPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLIT 1261
+ +++ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T
Sbjct: 1153 MKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFT 1212
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD--- 1318
Y YS YP P LTDLRS VNN +A+ AV K ++ S+ L ++ Y++
Sbjct: 1213 EYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFG 1272
Query: 1319 -YMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN 1377
PS E G PKVLGD++ES GAI LDS + VW+ M L+P+
Sbjct: 1273 QSFTGPSYGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPET 1330
Query: 1378 LQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIR 1437
++ +P++ L E C+ + + G A+V K + SA + + A +
Sbjct: 1331 IEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARV--KAGETTYSATKSGPCKLVAKK 1388
Query: 1438 IASQQLFSKLKAA 1450
+AS+ + L A
Sbjct: 1389 LASKAVLKDLIAG 1401
>sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1
SV=2
Length = 1909
Score = 633 bits (1633), Expect = e-180, Method: Compositional matrix adjust.
Identities = 520/1732 (30%), Positives = 777/1732 (44%), Gaps = 268/1732 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL-AHLIRKPQKSICIFLAPTVAL 117
AR+YQL++ ++A +N I +L TG GKT IA+LLI + L+ + +K + +FL P V L
Sbjct: 249 ARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPL 308
Query: 118 VQQQAKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQA+VI F+V +CG G S W++E + +VLVM QILL L H I
Sbjct: 309 VYQQAEVIRNQTCFQVGHYCGEMGQDFWDSR-RWQREFESKQVLVMTAQILLNILRHSII 367
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASAQA 234
+ME I LLI DECHHA K HPY+ +M +FY K P IFGMTASPV KG S+Q
Sbjct: 368 RMETIDLLILDECHHAVKK--HPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQV 425
Query: 235 NLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-----INDTSSSYVTCS 289
+ I +LE LD+ V +++D ++LE V P V +Y +++T +
Sbjct: 426 DCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAV 485
Query: 290 EQLAEIK----REQYISALS-------RKLHDHQSLRNTTKQLNRLHD--SMKFCLENLG 336
E+ A+ + Q++ A R+++ + N +H ++ + L LG
Sbjct: 486 EEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELG 545
Query: 337 VCGALHASYILLSG---DET--------------------MRNELIEA------------ 361
A LS DE ++ EL+E
Sbjct: 546 QWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVGK 605
Query: 362 -----------EGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLL 410
EG DD + EV A + + + K+
Sbjct: 606 PENGNAHDEMEEGELPDDPVVSGGEHVDEVIGA---------------AVADGKVTPKVQ 650
Query: 411 RLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSR 470
LI +L ++ + IVFV R+V A L + L L+ RC ++G N + M
Sbjct: 651 SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNS-QEMKS 709
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
+ M+ + KFR G + LLVAT V EEGLDI+ C +V+RFDL +TV ++IQSRGRAR P S
Sbjct: 710 SQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGS 769
Query: 531 EYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRT------------SSDAFTCSEERIY 578
+Y +V+ GN ++N E+ + +E ++RT S DA + +Y
Sbjct: 770 DYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGT---VY 826
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPAN 633
KV+++GA +S V L+H YCS+LP D + +P+F + GG C + LP N
Sbjct: 827 KVEATGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCN 886
Query: 634 APIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDS 693
AP + G SSM A++ CL A + LH++GA D LLP + + + E + +
Sbjct: 887 APFEILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEP 946
Query: 694 YEGEGSRGELHEMLVPAVLRQSWTKSQYPV-------RLNFYFMQFI-----PDPADRIY 741
G E + V VL+ W S V L Y ++ + DP
Sbjct: 947 VPGTARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEV 1006
Query: 742 REFGLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQA--------QQFQEMFLKV 793
EF + + L E + +DL++AR L G + ++F + +
Sbjct: 1007 SEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSI 1066
Query: 794 ILDRSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR---- 839
+LD S FVP+ + E + L+ I + D + R
Sbjct: 1067 VLDVDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPD 1126
Query: 840 -------RCL---------------------SSPVFGTPGG----SVDRKS--LP----- 860
R L S P +G G V R S LP
Sbjct: 1127 VYLGTNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAF 1186
Query: 861 --------SHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS- 909
S G L + +G D+ +V A H + V +I ++ + + P K+
Sbjct: 1187 EKEVEEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGY 1246
Query: 910 ----DSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHEL--EEYF 963
+ +++ D+ YG+ L +QPL++ + + +NLL R + ES + + Y+
Sbjct: 1247 LGPLEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETVLDKTYY 1306
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK+L+S P
Sbjct: 1307 VFLPPELCVVHPLSGSLIRGAQR--LPSIMRRVESMLLAVQLKNLISYPIP------TSK 1358
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE F ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1359 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1418
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYD------GRAPDDL 1137
+ A LQ YI+ F P ++ A G P + ++T+ S +D D+
Sbjct: 1419 YQFALVKGLQSYIQADRFAPSRWSAPG--VPPVFDEDTKDGGSSFFDEEQKPVSEENSDV 1476
Query: 1138 NAEVRCSKG--------HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFE 1189
+ G + L KT+ADVVEAL+G + + G AA +KWIGI VE +
Sbjct: 1477 FEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDD 1536
Query: 1190 ASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GCYQRL 1248
+V + + S+D LE L ++F +GLL++A H S G CYQRL
Sbjct: 1537 PDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRL 1596
Query: 1249 EFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNV 1308
EF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + +L S+
Sbjct: 1597 EFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSA 1656
Query: 1309 LSETINNYVDYMITPSSTREVKE----GPRCPKVLGDLVESSLGAILLDSGFNLNTVWKI 1364
L + I +V + T SS + PKVLGD+VES GAI LDSG + WK+
Sbjct: 1657 LEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKV 1716
Query: 1365 MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFIS 1424
L P++ L ++P+REL E C L++ + + G E VFI
Sbjct: 1717 FQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVE---------VFID 1767
Query: 1425 ACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVV 1484
+++ ++A + AA E + E IN
Sbjct: 1768 GVQVGVAQNPQKKMAQKLAARNALAA-----------------LKEKEIAESKEKHINNG 1810
Query: 1485 AADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCK 1544
A ++ E + G+ + P R L ++C W P++ C K
Sbjct: 1811 NAGEDQ------GENENGNKKNGHQP----------FTRQTLNDICLRKNWPMPSYRCVK 1854
Query: 1545 EEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLER 1596
E G +H K FTF V V ECIGEP K A + AA +L L +
Sbjct: 1855 EGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906
>sp|Q69LX2|DCL2B_ORYSJ Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica
GN=DCL2B PE=2 SV=2
Length = 1377
Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust.
Identities = 448/1396 (32%), Positives = 691/1396 (49%), Gaps = 158/1396 (11%)
Query: 56 KQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKP-QKSICIFLAPT 114
K +AR YQLE ++A+ N + +L TG GKT IAV+L+ AH +R+P + +FL PT
Sbjct: 31 KTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPT 90
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA+V+E+ V+ FCG W +++ EVLVM PQILL L H
Sbjct: 91 VVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHS 150
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGK 228
F +++ IALLIFDECHHA + N PYA I K+FY P + +PRIFGM+AS + K
Sbjct: 151 FFRLQDIALLIFDECHHA--RGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSK 208
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY--GPVINDTSSSYV 286
+ Q N K I+ +ENL+++KVY+V+ L ++ ++ + + ++ ++ +
Sbjct: 209 DLN-QHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANIL 267
Query: 287 TCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYI 346
+C +L + ++I AL RKLH SL N +++++LH + +CL NLGV A A+ +
Sbjct: 268 SCLNRLTK----KHIEALDRKLHG-SSLENAKQRISKLHRTFVYCLYNLGVWLAAKAAEV 322
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCI---EVLKEP 403
++ + G T+D ++ F SE + +LSC + E
Sbjct: 323 -----QSYEENSLSFWGETLDKNVEGFIRNYSE---------EVHRELSCFLKNGHIGEK 368
Query: 404 F--------FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRC 455
F + K+ LI L +R Q ++CIVFV R++T+ L +L ++ ++ W
Sbjct: 369 FPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSIHQMSGWNV 428
Query: 456 HFLVGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
+ G GL S SR I+E FR G++++++AT++ EEGLD+ +C LVIRFD TV
Sbjct: 429 KHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATV 488
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDA----FT 571
SFIQSRGRARM S+Y LV G+ K F M E + S T
Sbjct: 489 CSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKKFLASGQIMREESLRLGSISCQPLENT 548
Query: 572 CSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP 631
E+ Y+V+S+ A + D GT C + LP
Sbjct: 549 LCEDTYYRVESTPA------------------------------FDIDKASGT-CTLHLP 577
Query: 632 ANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDS 691
++P+ + + S+ K+ CLKA ++LH +GAL D LLP+ D ++EP + +
Sbjct: 578 KSSPVQTVNVEGEGSI--LKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENK 635
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYF-----MQFIPDPADRIYREFGL 746
P +W RL Y+ ++ P A L
Sbjct: 636 IE----------QPSYFPEEFVDNWRSFS---RLGIYYCYKISLEGCPKTASPTDILLAL 682
Query: 747 -------FVKS--LLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVIL-- 795
F S LPG ++ V + + L ++ A++FQ L ++
Sbjct: 683 KCDLGSDFTSSSFKLPGGQDNASVTMKYVG----IIHLNQEQVIIARRFQTTILSFLIGD 738
Query: 796 DRSE-------FNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFG 848
D E F+ VP+G YLLLP++ +DW ++ SSP++
Sbjct: 739 DHLEVSNGIKYFHEMQVPIG----------VVYLLLPLV--SGRIDWCSMKFS-SSPIYE 785
Query: 849 TPGGSVDR-KSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV-FEKNGYSPY 906
+ S LQ +G ++NS+V H FY+++ + + N P
Sbjct: 786 ANNKHMTHCHSCRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSRLPQ 845
Query: 907 KDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDL 966
D ++ D+ + +G+ L QPLL ++RN LHN + E + Y +L
Sbjct: 846 HDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYK-KEKEPGDRYSVEL 904
Query: 967 PPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLK 1026
PPELC++ + S + S +PSIM R++ +L++++LK L + + +V +L+
Sbjct: 905 PPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQ-FDVPVLKILE 963
Query: 1027 ALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKL 1086
ALTT+KCQE FS E LE LGD+FLKY RHLF + EG LT+ + N ++N+ L +L
Sbjct: 964 ALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQL 1023
Query: 1087 AARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG 1146
A +NL YI + F+P + C ER + + AP+ + ++ + S
Sbjct: 1024 ACSSNLVGYIHAEEFNPRDWII-------PCLDYDERG-NKKISFLAPNGMYSQRKMS-- 1073
Query: 1147 HHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPL 1206
+ K IAD VEAL+GA++ +G KAA +K +G+ +EF T I + K +
Sbjct: 1074 ---IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH----TEIPVERKISMKA 1126
Query: 1207 SASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYL 1264
+D+ +LE +LG++F LLL+A H S+ G CYQRLEFLGDA+LD+L T Y
Sbjct: 1127 EEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYY 1186
Query: 1265 YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-P 1323
YS YP P LTDLRS VNN +A+ AV K ++ S+ L ++ Y+ T P
Sbjct: 1187 YSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLGQSFTGP 1246
Query: 1324 SSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPI 1383
S E G PKVLGD++ES GAI LDS + VW+ M L+P+ ++ +P+
Sbjct: 1247 SYGWEAGIG--LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPV 1304
Query: 1384 RELLELCNSYDLDLQF 1399
+ L E C+ + +
Sbjct: 1305 KGLQEFCDRRSFKITY 1320
>sp|Q9LXW7|DCL3_ARATH Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana GN=DCL3 PE=1
SV=2
Length = 1580
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 462/1625 (28%), Positives = 753/1625 (46%), Gaps = 189/1625 (11%)
Query: 62 YQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQQQ 121
Y+L++ + A NII LGTG K+ I LI + K + IFLAPTV LV+QQ
Sbjct: 47 YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGS--SDTDKRLIIFLAPTVNLVKQQ 104
Query: 122 AKVIEESIGFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
I + KV + G G + S W++E +++VLVM PQILL L F+K+E+
Sbjct: 105 CCEIRALVNLKVEEYFGAKGVDKWTSQ-RWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKG-ASAQANLPK 238
+ LLI DECHH NHPYAK+MK+FY K P+IFG+TAS V+ KG S+ +N
Sbjct: 164 VCLLIIDECHH--TTGNHPYAKLMKEFYHESTSK-PKIFGLTASAVIRKGIVSSPSNYAA 220
Query: 239 SINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKRE 298
++ LE L+D+K+++ E+ E +E F ++ + GP++ + S S CS +L E
Sbjct: 221 QVSELERLMDSKIFNPEEREGVEKFATT-----VKEGPILYNPSPS---CSLELKEKLET 272
Query: 299 QYI--SALSRKLHD---------HQSLRNTTKQLNRLHDSMKFCLENLG-VCGALHASYI 346
++ A R+L + K+L+ + + CL+NLG +C L A
Sbjct: 273 SHLKFDASLRRLQELGKDSFLNMDNKFETYQKRLSIDYREILHCLDNLGLICAHLAAEVC 332
Query: 347 LLSGDETMRNELIEAEGNTIDDSLCR--FASQASEVFAAICRRDGIASDL--SCIEVLKE 402
L E + + E+E +C+ S + + + D DL + + +
Sbjct: 333 L----EKISDTKEESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLVDLQQNHLSAVIS 388
Query: 403 PFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN 462
S KL L +L +FR + +C++ V RI+TA+ + ++ LA +L N
Sbjct: 389 GHVSPKLKELFHLLDSFRGDKQKQCLILVERIITAKVIERFVKKEASLAYLNVLYLTENN 448
Query: 463 AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSR 522
++ I + F+ G++NLL T V EEG + C ++ FDLP+T+ S+ QS+
Sbjct: 449 PSTNVSAQKMQIEIPDLFQHGKVNLLFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQ 508
Query: 523 GRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDS 582
A+ S+ ++ GN ++ D + D M RE++ + + S
Sbjct: 509 KHAKQSNSKSIMFLERGNPKQRDHL------HDLMRREVL---------IQDPEAPNLKS 553
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILP-ANAPIHQIVG 641
+ G+GV I +++P +N + +
Sbjct: 554 CPPPVKNGHGVK-----------------------------EIGSMVIPDSNITVSEEAA 584
Query: 642 TPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGSRG 701
+ Q+ + ++ L + L L++ LL + N E S S S G R
Sbjct: 585 STQTMSDPPSRNEQLPPCKKLR----LDNNLL--QSNGKEKVASSKSKSSSSAAGSKKRK 638
Query: 702 ELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHLKV 761
ELH L +W ++ Y F + + +Y F L ++S L + +++
Sbjct: 639 ELHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSSFSLLLESTLAEDVGKVEM 698
Query: 762 DLHLARGRSVMTKLVPSG--------IMQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYC 813
DL+L R + V + P G +++A+ FQ+ F + + S+ ++
Sbjct: 699 DLYLVR-KLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKLFVGSKSQGTKREFLL 757
Query: 814 ESSSSTF------YLLLPV----IFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKS----- 858
++ +S+ +LLLPV + ++DW I C S F +D +
Sbjct: 758 QTDTSSLWHPAFMFLLLPVETNDLASSATIDWSAINSCASIVEFLKKNSLLDLRDSDGNQ 817
Query: 859 --------------LPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS 904
+ + N S ++ +E +V A H Y + V + + S
Sbjct: 818 CNTSSGQEVLLDDKMEETNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMS 877
Query: 905 PYKDSDSS---SHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE- 960
P++ SS ++ ++ YGI L HP QPL++ K NLL + E E +
Sbjct: 878 PFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKA 937
Query: 961 --------EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSAS 1012
LPPEL L I + + S+ LLPS+MHRLE+L++A +L+ + S
Sbjct: 938 GNVRKRKPNIHAHLPPEL--LARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCS 995
Query: 1013 FPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTR 1072
+ +S+ +L+A+TT C E FS+ERLE+LGD+ LKY HLFL + DEG+L+R
Sbjct: 996 I-DNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSR 1054
Query: 1073 RRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGR----RCPRICSKETERTIHSQ 1128
+R + ++NSNL +L LQ YIR+ F+P ++ A G+ P C +T
Sbjct: 1055 QRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREVPLDP 1114
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
+ C GH W+ K+++D EAL+GA+ G A+ +KW+GI V+F
Sbjct: 1115 KFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDF 1174
Query: 1189 EASQVTNIC--ISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQ 1246
+ + V +S + ++P L LE + H+F + LL +A H S R Y+
Sbjct: 1175 DPNLVVEAINRVSLRCYIPKEDEL--IELERKIQHEFSAKFLLKEAITHSSL-RESYSYE 1231
Query: 1247 RLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDS 1306
RLEFLGD+VLD+LIT +L++ Y + PG++TDLRS VNN+ FA VAV + + L +
Sbjct: 1232 RLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCA 1291
Query: 1307 NVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIML 1366
VL IN+Y+ P T + PK LGD+VES GA+L+D+ +L+ VW++
Sbjct: 1292 TVLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFE 1351
Query: 1367 SFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISAC 1426
L P++ LQL P REL ELC+S + G K A+A + + DV ++
Sbjct: 1352 PLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVK--AQATIQLQLDDVLLTGD 1409
Query: 1427 ATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINV-VA 1485
+ + K A+ A+ L ++L+ KT +G +++ ++V +A
Sbjct: 1410 GSEQTNKLALGKAASHLLTQLEKRNISRKTS----------------LGDNQSSMDVNLA 1453
Query: 1486 ADDNVFEKL--KISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCC 1543
+ + E L + +E Q IG ++ GG R L+E C + W PTFD
Sbjct: 1454 CNHSDRETLTSETTEIQSIVIPFIGPINMKKGG-----PRGTLHEFCKKHLWPMPTFDTS 1508
Query: 1544 KE------------EGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGML 1591
+E E + FT + + I E ++ GE + KK + + A +L
Sbjct: 1509 EEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAVMYA-GEARPDKKSSFDSAVVELL 1567
Query: 1592 WCLER 1596
+ LER
Sbjct: 1568 YELER 1572
>sp|Q8LMR2|DCL1_ORYSJ Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica
GN=DCL1 PE=3 SV=1
Length = 1883
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 394/1317 (29%), Positives = 597/1317 (45%), Gaps = 203/1317 (15%)
Query: 412 LIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGLKSMSRN 471
LI IL ++ + + I+FV R+VTA L +L L L+ RC L+G N + M
Sbjct: 629 LIKILLKYQHTEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNN-QEMRAC 687
Query: 472 AMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSE 531
M+ + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+
Sbjct: 688 QMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 747
Query: 532 YAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFT---------CSEERIYKVDS 582
Y +++ GN ++N E+ + +E M+RT S +Y+V+S
Sbjct: 748 YILMLERGNISHETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVES 807
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY--FDDLGGTI---CHIILPANAPIH 637
+GA +S V L+H YCS+LP D + P+F ++ GG++ C + LP NAP
Sbjct: 808 TGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFE 867
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGE 697
++ G SS+ A++ CL A + LH++GA D LLP + + E E + + + G
Sbjct: 868 KLEGPICSSIRLAQQAVCLAACKKLHEMGAFTDTLLP-DRGSGEGEKTEQNDEGEPLPGT 926
Query: 698 GSRGELHEMLVPAVLRQSW--------TKSQYPVRLNFYFMQFI-----PDPADRIYREF 744
E + V +LR W SQ+ ++L Y + + DP F
Sbjct: 927 ARHREFYPEGVADILRGEWILSGRDGYQNSQF-IKLYMYSVNCVNVGTSKDPFVTQLSNF 985
Query: 745 GLFVKSLLPGEAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLK--------VILD 796
+ + L E +DL +AR LV G ++ + Q + LK ++LD
Sbjct: 986 AIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLD 1045
Query: 797 RSEFNSE----------FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIR------- 839
S FVP+G + + + L+ I + ++ + + R
Sbjct: 1046 VDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYL 1105
Query: 840 ----RCL---------------------SSPVFGTPGG--------------SVDRKSLP 860
R L + P +G G + DR
Sbjct: 1106 GTNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARDRGHFS 1165
Query: 861 SH---GPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIVFEKNGYS--PYKDS-----D 910
+ G L + + + D+ +V A H + V I + N + P K+ +
Sbjct: 1166 DYQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLE 1225
Query: 911 SSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELE-------EYF 963
SS+ D+ YG+ L + KQPL+RA+ + +NLL R E S++ E + Y+
Sbjct: 1226 YSSYADYYKQKYGVELIYRKQPLIRARGVSYCKNLLSPR-FEHSDAREGDFSENLDKTYY 1284
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
LPPELC + + S G+ LPSIM R+E++L+A++LK ++ P A
Sbjct: 1285 VYLPPELCLVHPLPGSLVRGAQR--LPSIMRRVESMLLAVQLKDIIDYPVP------ATK 1336
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L+ALT CQE ER E+LGDA+LK+ V R LFL + EG+LTR R V+N L
Sbjct: 1337 ILEALTAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVL 1396
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALG----------RRCPRICSKET-----ERTIHSQ 1128
+ A LQ YI+ F P ++ A G P I +E+ ++ +
Sbjct: 1397 YQYALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQKESYDD 1456
Query: 1129 YDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEF 1188
Y +D E S + L KT+ADVVEAL+G + G AA +KWIGI E
Sbjct: 1457 YADNMQEDGEIEGDSS-CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAEL 1515
Query: 1189 EASQVTNICISSKSF-LPLS--ASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLG-GC 1244
+ ++ K + +P S S++ TL+ +LG +F ++GLL++A H S G C
Sbjct: 1516 DPEEIP----PPKPYDIPESIMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSC 1571
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQRLEF+GDAVLD+LIT +L+ Y L PG+LTDLR+ VNN+ FA VAV + L
Sbjct: 1572 YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1631
Query: 1305 DSNVLSETINNYV----DYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNT 1360
S+ L I +V + ++ P + PKVLGD+VES GAI LDSG++ +
Sbjct: 1632 GSSALETQIREFVKDVQEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSV 1691
Query: 1361 VWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKD 1420
VWK+ L P++ L ++P+REL E C L++ + + G E
Sbjct: 1692 VWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRAGNIATVE--------- 1742
Query: 1421 VFISACATNLSRKEAIRIASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETP 1480
VF+ +++ ++A KL A + K E+ K
Sbjct: 1743 VFVDGVQIGVAQNPQKKMAQ-----KLAARNALVVLKEKETATKK--------------- 1782
Query: 1481 INVVAADDNVFEKLKISEPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTF 1540
E + E + G+ R L ++C W P +
Sbjct: 1783 -----------EDERDGEKKNGAQM---------------FTRQTLNDICLRRQWPMPQY 1816
Query: 1541 DCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLERE 1597
C E G +H K F + V V ECIGEP K A + AA +L L R+
Sbjct: 1817 RCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRD 1873
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 46/266 (17%)
Query: 42 AESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELA-HLI 100
A+ AQ+ ++ AR+YQLE+ ++A N I +L TG GKT IAVLLI + ++
Sbjct: 250 ADRMGAAQREKPVAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKML 309
Query: 101 RKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLV 160
++ +K + +FL P V LV Y+VLV
Sbjct: 310 KENKKMLAVFLVPKVPLV-------------------------------------YQVLV 332
Query: 161 MIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFG 219
M QILL L H IKM+ I LLI DECHHA K HPY+ +M +FY K P +FG
Sbjct: 333 MTAQILLNILRHSIIKMDAIHLLILDECHHAVKK--HPYSLVMSEFYHTTPKEKRPAVFG 390
Query: 220 MTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
MTASPV KG ++Q + I +LE+ LD+ V +++D ++LE V P+ V QY
Sbjct: 391 MTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQY----- 445
Query: 280 DTSSSYVTCSEQLAEIKREQYISALS 305
D +++ + EQ+ +++ +ALS
Sbjct: 446 DKAATLWSLHEQIKQMESTVEEAALS 471
>sp|Q1DKI1|DCL1_COCIM Dicer-like protein 1 OS=Coccidioides immitis (strain RS) GN=DCL1 PE=3
SV=3
Length = 1500
Score = 365 bits (936), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 400/1419 (28%), Positives = 604/1419 (42%), Gaps = 239/1419 (16%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL +KA ++NII L TG GKT IAVLL L H+I KP + + F
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLL---LKHIIEQELIDRSAEKPHR-VSFF 155
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKR-LKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V LV QQA V++ +I +V FCG + L + WE+ + + V+V ++L C
Sbjct: 156 LVDSVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQC 215
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPD-IMKVPRIFGMTASPVVGK 228
L H F+KME I LLIFDE H+A K +HPYA+I+KDFY D K P+IFGMTASPV
Sbjct: 216 LLHAFVKMENINLLIFDEAHNA--KKDHPYARIVKDFYLKDGNAKRPKIFGMTASPV--- 270
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
A+ ++ K+ +LE LL++++ + + L V P V+ Y +
Sbjct: 271 --DAKMDVVKAARNLETLLNSQIATASNLSLLRQSVPRPNEEVWSYDRL----------- 317
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYIL- 347
+Q E + ++ LR+ L L F L+ GA A ++
Sbjct: 318 -DQPFETRL-------------YKELRSRFGDLRALEKLFTFSLKASSNLGAWCADWVWS 363
Query: 348 --LSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ + + E A + + + +E+ + I S ++
Sbjct: 364 YALTEESLPKLEGRAARTAMGNLPIAKIVRPEAEIQRIREASEIIRSHKFGDPAVRPELL 423
Query: 406 SKKLLRLIG-ILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGV--- 461
S K+ RL +L F KCIVF + TAR L + + R L+GV
Sbjct: 424 SPKVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSRIG-TKHLRPGVLIGVRSD 482
Query: 462 -NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQ 520
+ G+ R + +++ FR GE+N L AT V EEGLDI C L++RFDL T+ +IQ
Sbjct: 483 ASGGMNISFRQQVLAVV-SFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQ 541
Query: 521 SRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--------EIMDRTSSDAFTC 572
SRGRAR S +A LV+ N + + + E+ M R I++ DA
Sbjct: 542 SRGRARHMNSTFAHLVERDNFVHRESVNHLQSSEEIMKRFCISLPKDRILNSDDVDALYE 601
Query: 573 SE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIIL 630
S+ + Y V ++GA ++ + +L + + L +++ + +Y+ +C ++L
Sbjct: 602 SDRNRKSYTVQTTGAKLTYSSSLVVLAHFANSLQYEKETSTVVSYYHRFTKNAFVCEVVL 661
Query: 631 PANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDE 683
P +PI IVG P S AK+ A + L K G L+D+ LP NA
Sbjct: 662 PEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFVSTYHKRLPAMRNA---R 718
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDP-ADRIYR 742
+ S S+ Y +M V L ++ ++ P LN + F P R Y
Sbjct: 719 LAISSKKSNQY----------DMKVKPKLWET-SRGIIPTSLNIVVLGFRPRRLLHREYH 767
Query: 743 EFGLFVKSLLPGEAE---HLKVDLHLARGRSVMTKLVPSGIMQAQQ------------FQ 787
L + LP E +L+ D+ V+ + SG + FQ
Sbjct: 768 PLVLLTREKLPHFPEFPLYLEDDIEC----DVICSSISSGFQVSSHDLEVLTTFTLRIFQ 823
Query: 788 EMFLKVI-LDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPV 846
++F KV D PL C+ SSS ++ +DW I++ +P
Sbjct: 824 DIFHKVYDRDVGMMTYWLAPLNLS--CDISSSA---------SRDLLDWGILQFVFDNP- 871
Query: 847 FGTPGGSVDRKSLPSHGPLQLHNGWSSESDV---ENSLVYATHK-KWFYLVTNIVFEKNG 902
+P WSS + N VY ++ Y I
Sbjct: 872 -----------EIP----------WSSSNSAAFFANRFVYDRWDGRYRYFTHGIDPSLRP 910
Query: 903 YSPYKDSDSSSHVDHLISSYGIHL-KHPK----------QPLLRAKPLFRLRNLLHNRKL 951
P S + I Y + L K+ + QP+++A+ + RNLL R
Sbjct: 911 SDPPPSSMARRRHMGNIMDYCLSLFKNARKKFLENCDWTQPVIKAEIIQLRRNLLDKRT- 969
Query: 952 EDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSA 1011
+ E + +Y+ L P L I + + P+I+ R+E+ L+A+E L
Sbjct: 970 -NKEKIKEGDYYICLEP----LTISAIPASVAAFAFAFPAIISRIESYLIALEACQELDL 1024
Query: 1012 SFPEGAEVSAEMLLKALTTE-------KCQERF-------SLERLEILGDAFLKYAVGRH 1057
+S E+ L+ALT + + Q+ + ERLE LGD FLK A
Sbjct: 1025 P------ISPELALEALTKDSDNTDEHRAQQIHFQRGMGKNYERLEFLGDCFLKMATSIS 1078
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF ++ DE + +R V N NL K A R L +IR Q F ++ G
Sbjct: 1079 LFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYAFIRSQSFSRRGWYPGGL------ 1132
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA--------FIDD 1169
T Q G ++ H L KTIADV EAL+GA D
Sbjct: 1133 ---TLLQGKGQSKG-----------ATENKHALADKTIADVCEALIGACCLLASKNHRFD 1178
Query: 1170 SGFKAATAF--------LKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLG 1220
KA TA L W + + + +A LD+A ++ LG
Sbjct: 1179 IAVKAVTALVSSDDHNVLNWEQYSRLYSIPKYQTAVVD-------AAELDLAAQVKKKLG 1231
Query: 1221 HQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
+ F + LL AF HPS+ CYQRLEFLGDA+LD ++Y +P P LT
Sbjct: 1232 YDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIYHKHPDKDPQWLT 1291
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT-------PSSTREVK 1330
+ + +V+N+ +VAV + L S L I NYV+ + P +
Sbjct: 1292 EHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQSQITNYVEEIEAAELESGDPPDAWTLT 1351
Query: 1331 EGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFL 1369
P PK L D+VE+ +GAI +DSGF+ V + FL
Sbjct: 1352 SDP--PKCLPDMVEAYIGAIFIDSGFSFEVVEEFFQKFL 1388
>sp|Q0UI93|DCL1_PHANO Dicer-like protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL1 PE=3 SV=2
Length = 1522
Score = 350 bits (898), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 397/1473 (26%), Positives = 639/1473 (43%), Gaps = 244/1473 (16%)
Query: 23 ATSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTG 82
ATS + E +++ + +++V R YQ+EL +A +N I L TG
Sbjct: 41 ATSKIANEGQLSIRDILASQDTAVRITN--------PRDYQMELFLRAKMQNTIAVLDTG 92
Query: 83 CGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFC 137
GKTHIA LL+ EL + + + FL +V LV QQA V+ + V
Sbjct: 93 TGKTHIATLLLRHVLEEELENRAKGCAHKMAFFLVDSVNLVFQQANVLRCGLDQGVEGIS 152
Query: 138 GG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSN 196
G + L W+K V+V Q+L+ C+ H F+ + + LLIFDE HHA KSN
Sbjct: 153 GAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMHSFMSISRMNLLIFDEAHHA--KSN 210
Query: 197 HPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
HPYA++MKD+Y + D K PRIF MTASPV KG SA+ ++ ++ LE LL +++ +
Sbjct: 211 HPYARVMKDYYAHELDTSKRPRIFAMTASPVDVKGQSAE-HVREAARELETLLHSRIATT 269
Query: 255 EDAEDLESFVSSPVVRVYQYGPVINDTSSS-YVTCSEQLAEIK--REQYISALSRKLHDH 311
D+ + ++ P V Y + N+ + + + ++ R+ +I+A KLH
Sbjct: 270 SDSALARNSITRPEEEVAVYTRLRNEFETPLHQKVKAKYGDVAPFRKLFITA---KLH-- 324
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLC 371
+L R M + DE R I E + +
Sbjct: 325 ------ASELGRWASDMYWSFA---------------FADEQSRKLQIREE---LKYNRS 360
Query: 372 RFASQASEVFAAICRRDGIASDLSCIEV----LKEPFFSKKLLRLIGILSTFRLQQHM-K 426
+ A+E+ A + R + + E+ L E S K+++L L+ + + + +
Sbjct: 361 KRDWSAAELDAQMARLKEATAFVQQYEIGAPTLSEQDLSSKVMKLQYWLNLYYERTTLAR 420
Query: 427 CIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVN--AGLKSMSRNAMKSILEKFRSGE 484
CIVFV + TA+ L I ++ + C LVG+N AG +++S + L+KFR GE
Sbjct: 421 CIVFVEKRHTAQLLKLIFDHIGG-PNLHCDVLVGINNRAGEENVSLRSQILTLQKFRRGE 479
Query: 485 LNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQREL 544
LN L AT V EEGLDI C LV+RFDL T+ ++QSRGRAR S+Y ++++ N+
Sbjct: 480 LNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGRARHRNSKYLHMLEAENKEHT 539
Query: 545 DLIKNFSKEEDRM---------NREIMDRTSSDA-FTCSEERI---YKVDSSGACISAGY 591
+ + N +E+ M +R++ D A E+++ Y + SGA ++
Sbjct: 540 ERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAELIALEDKLFPSYTDEKSGAKLTYRS 599
Query: 592 GVSLLHRYCSKLP---HDEFFNP----KPKFYYFDD-----LGGTICHIILPANAPIHQI 639
+S+L + + P H+ P PK DD G +C +ILP + PI +
Sbjct: 600 SLSILSHFVATYPSPDHNTMAQPTYVVNPKIS--DDPRDPQRNGFVCEVILPEHCPIISM 657
Query: 640 VGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSSDSDSYEGEGS 699
VG S AK A K +L + LN++LLP T + + ++ E
Sbjct: 658 VGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLP-----TISKYLPAMRNALLAVSEKK 712
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGEAEHL 759
+G ++ P +Q + P L+ + DR ++ + + P +
Sbjct: 713 KGNYAMVIKPTFWKQD--RDTVPESLHLTIID-ADRGLDRPHQPLAMLTRRPFP-QLPSF 768
Query: 760 KVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVILDRSE--FNSEFVPLGKDDYCESSS 817
+ L R +++++ + I + EMF + L E +N + DY S
Sbjct: 769 PIYLTDCRPSNIVSQSLHIPISLTPELLEMFTRFTLRIFEDIYNKVY------DYDVSKM 822
Query: 818 STFYLLLPVIFHKNS-----------VDWKIIRRCLSSPVFGTPGGS-----VDRKSL-P 860
S Y +LPVI H+ + +D IR+ + P + S +DR + P
Sbjct: 823 S--YWMLPVIEHRVASVRSMSNPQEVLDMDQIRKVYNEPFWKWSPQSRTDDLIDRYFVDP 880
Query: 861 SHGPLQLHNG-----WSSESDVENSLVYATHKKWFYLVTNIVFEKNGYSPYKDSDSSSHV 915
+G + ++ + V ++ HK + NI+ + DS
Sbjct: 881 MNGGRRYYSDRLAPHLKPQDPVPANVPRQNHK----FMKNIL-------DFSDSK----- 924
Query: 916 DHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKI 975
+ S I H QP+L+ + + RN L N +ED E EL + PE L I
Sbjct: 925 --WMKSRDITRWHQDQPVLQVEKIPFRRNHLAN--VEDKEKKELANLETYICPE--PLHI 978
Query: 976 IGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT----- 1030
+ +LP+I+HR E+ L+A++ +L +VS + L+ALT
Sbjct: 979 SNLATPFVVMCYVLPAIIHRFESYLIALDACDVLD------LKVSPALALEALTKDSDNS 1032
Query: 1031 -EKCQERFSL--------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
E +E+ + ERLE LGD FLK A +F+ +E E RR + N
Sbjct: 1033 EEHGEEKINFKSGMGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQ 1092
Query: 1082 NLLKLA-ARNNLQVYIRDQPFDPCQFFALGRRCPRICS-KETERTIHSQYDGRAPDDLNA 1139
NL++ A + L Y+R F ++ G + R K+TE D LN
Sbjct: 1093 NLMETAVGKKKLYKYVRTDAFSRRNWYPEGLKLLRGKGLKKTEE-----------DWLNV 1141
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVG-AFID------------DSGFKAATAFL------- 1179
H L K++ADV EA +G AF+ D KA F
Sbjct: 1142 T-------HNLGDKSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLM 1194
Query: 1180 -KWIGIQVEFEASQVTNICISSKSFLPLSASLDMA-TLEILLGHQFLHRGLLLQAFVHPS 1237
KW + + + + LD+A +E+ ++F + LL AF+HPS
Sbjct: 1195 EKWTDYYAAYTKPKYQTAGAT-------ATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPS 1247
Query: 1238 FNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV 1294
+ YQRLEFLGD++LD +L+ YP P LT+ ++ +V+N+ V V
Sbjct: 1248 QPFMWENIPSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCV 1307
Query: 1295 DQSFYKFLIFDSNVLSETINNY--------------VDYMITPSSTREVKEGPRCPKVLG 1340
++ + ++ +LS I +Y VDY ++ V E P+C L
Sbjct: 1308 KLGWHTHMKQNTAILSSQIRDYVYEVEEAEREANGAVDYWVS------VSEPPKC---LA 1358
Query: 1341 DLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL 1373
D++E+ + AI +DS F+ N V K L P
Sbjct: 1359 DVIEAFVAAIFVDSEFDFNVVQKFFDLHLKPFF 1391
>sp|A1CBC9|DCL1_ASPCL Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl1 PE=3 SV=2
Length = 1534
Score = 337 bits (863), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 390/1436 (27%), Positives = 612/1436 (42%), Gaps = 259/1436 (18%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL ++A +N I L TG GKT IAVLL L H+++ KP + + F
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLL---LRHVLQNELNDRANGKPHR-VSFF 179
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V L QQA V+ +I V F G L WE+ + Q V+V +IL C
Sbjct: 180 LVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQC 239
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGK 228
L + ++M I LLIFDE HH K +HPYA+I++D ++K + PRIFGMTASP+ K
Sbjct: 240 LLNSHVRMNQINLLIFDEAHH--TKKDHPYARIIRDSYFKASPPQRPRIFGMTASPIDTK 297
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G ++ + LE LLD+++ + L VS P+ +V+ Y + S +
Sbjct: 298 G-----DIIAAATRLETLLDSRIATTSKITLLRQVVSRPIEKVWAY----DRLESPF--- 345
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCL---ENLGVCGALHASY 345
K + H+ + N + L +F LG + A
Sbjct: 346 ------------------KTNLHKLMENRFGNVKALEGVFRFAWYASSELGRWCSDRAWL 387
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ D + +E N + +S A++ F I AS++ +P F
Sbjct: 388 YALADDVLPK---LEGHVNKLAESTAA-ATERDMAFKEITLIKE-ASNIVKAHTFNDPEF 442
Query: 406 SKKLLRLIGILSTFRLQQHM------KCIVFVNRIVTARALSYILQNLKFLASWRCHFLV 459
+L + +L T L +H KCI+F + TA+ L + L + R L+
Sbjct: 443 PGELSPKVRLLQT-ELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILS-IPHLRPGVLI 500
Query: 460 GVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
GV +G + M+ + L KFR GE+N L AT V EEGLDI C LV+RFDL T+
Sbjct: 501 GVRSGDIGGMNITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLI 560
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT------S 566
++QSRGRAR S YA +V+ N ++ + E M E + DR
Sbjct: 561 QYVQSRGRARHYHSTYASMVEKDNSDHEARLREVREAEKTMQNFCETLPEDRILHGNDHD 620
Query: 567 SDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
D+ EE R + V S+GA ++ +++L RY S L +++ P+ Y +G T
Sbjct: 621 LDSLLQHEEGRRTFTVKSTGARLTYHSAIAILARYASSLQYEKETTPQAT-YVVQSVGNT 679
Query: 625 -ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQE 676
+C +ILP +PI + G+P AK+ A L + L+D+ LP
Sbjct: 680 YVCEVILPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLLRRHKLLDDFFKSIYHKRLPAM 739
Query: 677 DNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIP-D 735
NA + + S ++ Y+ +L P++ R+ + P +L + +P +
Sbjct: 740 RNA---KLAITSKKTNQYDM---------LLKPSIWRRH--QGILPSKLYGTILSLLPSE 785
Query: 736 PADRIYREFGLFVKSLLPG-EAEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQEMFLKVI 794
P R ++ + + LP A + +D + TK+VP + + L+ +
Sbjct: 786 PLSREHQPILVLTREKLPDFPAFPIYLD------EDIETKVVPRSLDTGMELSAEELRAL 839
Query: 795 LDRSEFNSE-FVPLGKDDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGT---- 849
+ F F + Y + S Y L P + P+
Sbjct: 840 ---TTFTLRIFRDVFHKVYEQESEKLPYWLAP-----------------AEPLDANGREP 879
Query: 850 -PGGSVDRKSLP---SHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
P G +D K++ + + + ES V N ++ KW F+ + + +
Sbjct: 880 GPRGIIDWKTVTFVQENDEIVFSRDLAPESLV-NRFMF---DKWDGRSRFFTIKVMEGLR 935
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLK-----------HPKQPLLRAKPLFRLRNLLHNR 949
P H+D+++S Y + L H QP+L+A+ + RNLL
Sbjct: 936 AADPPPSSVPRRRHMDNIMS-YCLSLSKNSRARFLAGCHWDQPVLQAELVRLRRNLLD-- 992
Query: 950 KLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
KL E E F P LKI I S+ P+I+ RL++ L++IE L
Sbjct: 993 KLTTEEKKIQTECFICAEP----LKISAIPPSIASTCLAFPAIITRLDSYLISIEACDEL 1048
Query: 1010 SASFPEGAEVSAEMLLKALT--TEKCQERF------------SLERLEILGDAFLKYAVG 1055
+ ++ L+A+T ++ +E + ERLE LGD FLK A
Sbjct: 1049 DLV------IRSDYALEAVTKDSDNTEEHRGQQIHFQRGMGKNYERLEFLGDCFLKMATS 1102
Query: 1056 RHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPR 1115
LF + DE + R + N NL A + + YIR + F ++ G
Sbjct: 1103 IALFTQNPDDDEFDYHVNRMCLICNKNLFNTAKKRQIYRYIRSRSFSRHVWYPDGLTL-- 1160
Query: 1116 ICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI-------- 1167
+ K+ + + SQ H L +KTIADV EAL+GA +
Sbjct: 1161 LQGKDHSKKMLSQ-----------------AKHALGEKTIADVCEALIGACLLSGGPEHR 1203
Query: 1168 DDSGFKAATAFL--------KW---IGI------QVEFEASQVTNICISSKSFLPLSASL 1210
D G KA + F+ +W IG+ QV TN+ +
Sbjct: 1204 FDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNYQVRKAEGAETNLALQ----------- 1252
Query: 1211 DMATLEILLGHQFLHRGLLLQAFVHPS-----FNRLGGCYQRLEFLGDAVLDYLITSYLY 1265
+E LG+ F + LL A HPS + R+ CYQRLEFLGD++LD + L+
Sbjct: 1253 ----VEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRV-PCYQRLEFLGDSLLDMVCVEDLF 1307
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
+P P LT+ + +V+N+ +AV F+K + SN L I YV+ + T +
Sbjct: 1308 HRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNPLQAQITYYVEEIETAEA 1367
Query: 1326 TRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
E V + P PK L D+VE+ LGAI +DS F+ + + + P +
Sbjct: 1368 ESEGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSDFSFEVIEAFFQAQIKPYFQ 1421
>sp|Q7S8J7|DCL1_NEUCR Dicer-like protein 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-1
PE=2 SV=1
Length = 1584
Score = 324 bits (831), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 400/1508 (26%), Positives = 630/1508 (41%), Gaps = 291/1508 (19%)
Query: 26 AVVEECSVA----VSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGT 81
A +E VA + +GF +E + + R+YQ+EL ++A ++N I L T
Sbjct: 95 AAIEAARVAGVDVLPAIGFDSERIITS----------PREYQVELFERAKQQNTIAVLDT 144
Query: 82 GCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTF 136
G GKT IA +L+ EL + + I FL VALV QQ + +++ F +
Sbjct: 145 GSGKTLIAAMLLRWVITGELEDREKGLPRRIAFFLVDKVALVFQQHSFLTKNLDFPMEKL 204
Query: 137 CGGS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKS 195
CG + ++S W++ ++Q EV+V +IL L+H +I+M+ I LLIFDE HH K
Sbjct: 205 CGEMVEGVESKAFWKEALEQNEVVVCTAEILSTALHHSWIRMDQINLLIFDEAHH--TKK 262
Query: 196 NHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
+HPYA+I+K+FY + + PRI G+TASPV A+ + ++ LE LL +++ +
Sbjct: 263 DHPYARIIKNFYIDEQLERRPRILGLTASPV-----DAKVDPRRAAAELEALLHSQIATA 317
Query: 255 EDAEDLESFVSSPVVR-VYQYGPVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQS 313
D L+ + P V +Y + S ++QL ++ Q + +
Sbjct: 318 ADPAALQHTICKPKTELVVEY---VRGRPDSETVLNKQLRKLVGGQELF--------KKP 366
Query: 314 LRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRF 373
L TT ++L +C + + L T R+ + A + I + +
Sbjct: 367 LNFTTSAASKLG---TWCADRYWQLFFKQEDIVKLES-RTERDLMKVAALDEITEKHVKQ 422
Query: 374 ASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTF--RLQQHMKCIVFV 431
+A E+ + + L S K++ L+ IL R +CI+FV
Sbjct: 423 VREAHEL---------VNAHTFSPAALDPTMLSSKVIMLVRILRDQFERGVGAQRCIIFV 473
Query: 432 NRIVTARALSYILQNLKF---LASWRCHFLVG--------VNAGLKSMSRNAMKSILEKF 480
+ TA L+ +LQ + + S LVG VNA + +N I+ KF
Sbjct: 474 RQRNTAMLLADLLQQPEIKSHIPSIAAEVLVGGGTTGSSYVNAKINFQQQN---RIIRKF 530
Query: 481 RSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN 540
+ GE+N L AT V EEGLDI C +VIRFDL +T+ IQSRGRAR P S Y +++ GN
Sbjct: 531 KLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRPDSRYIQMIEKGN 590
Query: 541 ----QREL------DLIKNFSKE--EDR------MNREIMDRTSSDAFTCSEERIYKVDS 582
R L D+++ F + EDR MN + + R +R Y V
Sbjct: 591 YEHHSRILRAKGAEDVLRKFCEALPEDRKLTGNHMNLDYLLRKEKG------KRQYTVPD 644
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGT 642
+GA +S + L + + LPH + P++Y GG C +++P +PI VG
Sbjct: 645 TGAKLSYMQSLVCLANFTATLPHPPETSLSPEYYITTVPGGFQCEVVMPDASPIKSAVGK 704
Query: 643 PQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQEDNATEDEPMLFSSDSDSYE 695
S AK A + L K G L+++L LP+ NA + SS +
Sbjct: 705 VHLSKGVAKCAAAFELCLALLKAGHLDNHLQSVFTKQLPEMRNAR----LAVSSKKKTEY 760
Query: 696 GEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQFIPDPADRIYREFGLFVKSLLPGE 755
+ EL V V+ Q + + F+ PD R R L +S LP
Sbjct: 761 AMRLKPELWS--VRGVVTQLFATA---------FVLENPDTLGRSSRPLLLLSRSALP-- 807
Query: 756 AEHLKVDLHLARGRSVMTKLVP-SGIMQA-----QQFQEMFLKVILDRSEFNSEFVPLGK 809
E L R + VP G +QA +Q LK +D F+ E+
Sbjct: 808 -EVASFPLFFGTKRFSKVRCVPIPGSVQADDTLVEQLTRFTLKAFMDV--FSKEY----- 859
Query: 810 DDYCESSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSL---------- 859
E+++ L + + D+++ + +P +DRK+L
Sbjct: 860 ----EATAVNLPYFLSPMDGGHGFDFRLAK---------SPAHLIDRKALAYVSENEKVP 906
Query: 860 -----------------PSHGPLQL-----HNGWSSESDVENSLVYATHKKWFYLVTNIV 897
P G + + V + +V H+ W L T
Sbjct: 907 YTFLEPDDFFQDKFVVDPYDGARKFFTHHRRHDMKPTDPVPDGIVAPNHRAWRGLGTT-- 964
Query: 898 FEKNGYSPYKDSDSSSHVDHLIS-SYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLEDSES 956
D ++ + L S S G + QP++ A + R+ L + L D E
Sbjct: 965 -----------HDILNYSNSLWSKSRGFMIFQADQPVVEAALISTRRDFLDD-TLRD-ED 1011
Query: 957 HELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEG 1016
E ++ F L P ++I D+ + L PSI+HR+E+ LVA++ LL G
Sbjct: 1012 VEPQQCFLILEP----MRISPIPADVVAMLLCFPSIIHRVESNLVALDACKLL------G 1061
Query: 1017 AEVSAEMLLKALTTEKC--------QERF------SLERLEILGDAFLKYAVGRHLFLLH 1062
++ ++ L+A T + +E F + ERLE LGD+FLK A ++ L
Sbjct: 1062 LDLRPDLALEAFTKDSDNSDEHDAEKENFQTGMGDNYERLEFLGDSFLKMATTIAIYTLI 1121
Query: 1063 DTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETE 1122
E E R + N NL A L+ YIR F+ Q++ G + SK+
Sbjct: 1122 PDKGEFEYHVERMLLICNKNLFNNALEIGLEEYIRSMSFNRRQWYPEGLILKKGKSKD-- 1179
Query: 1123 RTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA-FID-------DSGFKA 1174
++ H L K+IADV EAL+GA ++ D KA
Sbjct: 1180 ---------------------ARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKA 1218
Query: 1175 ATAFLK-----WIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGL 1228
TA +K I + Q S + SA DMA +G++F H L
Sbjct: 1219 VTAMVKDKKHRMISYGDYYAVYQKPTWQTESAN----SAQRDMAKKFSERMGYKFKHPRL 1274
Query: 1229 LLQAFVHPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
L AF HP++ L YQRLEFLGDA+ D + YL+ +P P LT+ + +V+
Sbjct: 1275 LRAAFQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVS 1334
Query: 1286 NQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM-----------ITPSSTRE------ 1328
NQ ++ F K + S + + I YV + I T +
Sbjct: 1335 NQFLCCLSFHLGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEAINAGKTADEYSRDY 1394
Query: 1329 ---VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRE 1385
+ R PK L D+VE+ +GAI +DS ++ + V F N+ + P E
Sbjct: 1395 WVHITHASRLPKCLSDVVEAYIGAIFVDSEYDYSVVQ-----------NFFNMHVLPFFE 1443
Query: 1386 LLELCNSY 1393
+ L +++
Sbjct: 1444 DMHLYDTF 1451
>sp|Q2U6C4|DCL1_ASPOR Dicer-like protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl1 PE=3 SV=2
Length = 1523
Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 227/744 (30%), Positives = 342/744 (45%), Gaps = 115/744 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---------KPQKSICIF 110
R+YQ+EL ++A +N I L TG GKT IAVLL L H+I+ KP + I F
Sbjct: 117 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLL---LKHIIQNELIDRANGKPPR-ISFF 172
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYC 169
L +V L QQA V+ ++ V F G L S W+ + + V+V +IL C
Sbjct: 173 LVDSVTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQC 232
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGK 228
L + +I+M+ I LLIFDE HH K +HPYA+I+++ Y K D K PRIFGMTASP+ K
Sbjct: 233 LLNSYIRMDQINLLIFDEAHH--TKKDHPYARIIRESYLKADPTKRPRIFGMTASPIDTK 290
Query: 229 GASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTC 288
G ++ +S LE LLD+K+ + L V P+ ++Y
Sbjct: 291 G-----DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEY-------------- 331
Query: 289 SEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLE---NLGVCGALHASY 345
++ + KL +Q L+ ++ L +F L+ LG C A A
Sbjct: 332 ---------DKLDPPFATKL--YQILQARFGDISSLQPVFRFTLQASSELGPCCADRAWA 380
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF 405
L+ D L + EGN R +Q+ C I+ +++K F
Sbjct: 381 YALADD-----VLPKLEGNV------RKLAQSISSPIPQCALKEISRIQEASDIVKNHSF 429
Query: 406 SK-----------KLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWR 454
+ +LLR ++ F KCIVF + TA+ L + L+ + R
Sbjct: 430 NSPNVPGELSPKVQLLRQ-KLIKYFEHPTKTKCIVFTQKRYTAKMLFDLFSTLE-IPYLR 487
Query: 455 CHFLVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDL 511
L+GV +G + M+ + + L KFRSGE+N L AT V EEGLDI C LV+RFDL
Sbjct: 488 PGVLIGVRSGDIVGMNVSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDL 547
Query: 512 PETVASFIQSRGRARMPQSEYAFLVDSGNQ---------RELD-LIKNFSKE--EDRMNR 559
T+ ++QSRGRAR S YA +++ N RE + L+++F + EDR+
Sbjct: 548 YNTLIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILH 607
Query: 560 EIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD 619
I S E+R + + ++GA ++ +++L RY S L +++ + + +
Sbjct: 608 GIDSEIDSILQGEEEKRTFIIRATGAKLTYHSALAILARYASSLQYEKETSAQATYVVLP 667
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL------- 672
+C +ILP +P+ + G P S AAK+ A L K L+D+
Sbjct: 668 QNNSFVCEVILPEKSPVRGLTGVPASKKSAAKQSAAFDTCVLLRKHKLLDDHFNSVYHRR 727
Query: 673 LPQEDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQ--YPVRLNFYFM 730
LP NA + +S SR ++ML L W K Q P +L +
Sbjct: 728 LPAMRNAR----LAITS---------SRTNQYDMLSKPSL---WGKQQGTLPEKLFATVI 771
Query: 731 QFIP-DPADRIYREFGLFVKSLLP 753
FIP +P R +R L + LP
Sbjct: 772 SFIPSEPLRRRHRSIILLTRERLP 795
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 209/461 (45%), Gaps = 57/461 (12%)
Query: 930 KQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLL 989
+QP+L + + RNLL K+ D+E F + P L+I ++I +S
Sbjct: 966 QQPVLEVELVRLRRNLLD--KMTDTEKDVETRCFVCIEP----LRISAIPEEIAASCLAF 1019
Query: 990 PSIMHRLENLLVAIELKHLLSAS---------FPEGAEVSAEMLLKALTTEKCQERFSLE 1040
P+I++RL+ L+A+E L S F + ++ + E ++ + ++ + + E
Sbjct: 1020 PAIINRLDAYLIALEGCKTLDLSVKPEYALEAFTKDSDNTEEHRVQQIHVQRGMGK-NYE 1078
Query: 1041 RLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQP 1100
RLE LGD FLK A LF+ + DE + R + N NL A + L Y R +
Sbjct: 1079 RLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYTRSRG 1138
Query: 1101 FDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVE 1160
F ++ G T+ D R ++AE + H L +KT+ADV E
Sbjct: 1139 FSRHTWYPDGL------------TLLHGRDHRK--KISAESK-----HALREKTVADVCE 1179
Query: 1161 ALVGAFIDDSGF--------KAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSASLD 1211
AL+GA + G KA TA + + A ++ + ++ P LD
Sbjct: 1180 ALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADYTSSYMLPKYQTQSPDGYELD 1239
Query: 1212 MA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLYSV 1267
+ +E LG++F + LL AF HPS+ CYQRLEFLGD++LD + L+
Sbjct: 1240 LGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGDSLLDMVCVDDLFYR 1299
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
YP P LT+ + +V+N+ +AV + L SN L I +Y + + +
Sbjct: 1300 YPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENES 1359
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
+ V + P PK L D+VE+ LGA +DS F V
Sbjct: 1360 QGAVDYWLVTKDP--PKCLPDMVEAYLGAAFVDSDFQFRVV 1398
>sp|Q4WVE3|DCL1_ASPFU Dicer-like protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=dcl1 PE=3 SV=3
Length = 1537
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 225/741 (30%), Positives = 337/741 (45%), Gaps = 108/741 (14%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ EL + FL +
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDS 186
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ +I V F G L W+K + + V+V +IL CL +
Sbjct: 187 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNS 246
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGKGASA 232
+++M+ I LLIFDE HHA K +HPYA+I++D ++K + PR+FGMTASP+ KG
Sbjct: 247 YVRMDQINLLIFDEAHHA--KKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG--- 301
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
++ ++ LE LD+++ + L VS P+ +V+ Y N + T +L
Sbjct: 302 --DITEAATRLETFLDSRIATTSKITLLREVVSRPIEKVWAY----NRLEPPFAT---EL 352
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD- 351
++ +Y K L ++ LG + A + L+ D
Sbjct: 353 YKLMDTRY---------------GNIKVLEGVYRFAWNASSELGKWCSDRAWWHALADDV 397
Query: 352 ----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFF-- 405
E N+LIE+ NT+ ++ VF I R + E +K FF
Sbjct: 398 LPKLEGNINKLIES--NTM-------KAEHGAVFKDIIRIREAS------ETVKNYFFTD 442
Query: 406 -------SKKLLRLIGILST-FRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHF 457
S K+ RL LS F KCIVF + TA+ L+ + L + + R
Sbjct: 443 PELPGELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLN-IPNLRPGV 501
Query: 458 LVGVNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+GV G + M+ + L KFR+GE+N L AT V EEGLDI C LVIRFDL T
Sbjct: 502 LIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRT 561
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--EIM--DRT----- 565
+ ++QSRGRAR S YA +V+ N +K + E+ M R EI+ DR
Sbjct: 562 LIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHGND 621
Query: 566 -SSDAFTCSEE--RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLG 622
D+F EE R + V S+GA ++ +++L RY S L +++ P+ +
Sbjct: 622 HDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVTIASN 681
Query: 623 GTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL-------LPQ 675
+C +ILP +PI + G+P AK+ A L K L+ Y LP
Sbjct: 682 AYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNRLLDGYFNSIYHRRLPA 741
Query: 676 EDNATEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFY--FMQFI 733
NA + + +++Y+ +L P++ W K + FY M +
Sbjct: 742 MRNA---KLAITCKRTNAYDM---------LLKPSI----WAKQRTTPTETFYGIHMSLL 785
Query: 734 PD-PADRIYREFGLFVKSLLP 753
P P R +R L + LP
Sbjct: 786 PSKPLSRDHRPILLLTREKLP 806
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 207/461 (44%), Gaps = 58/461 (12%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L+A+ + RNLL K+ E E F P L+I I S+ P
Sbjct: 979 QPVLQAELVRLRRNLLD--KMTTQEKEMQTECFICAEP----LRISALPPSIVSTCLAFP 1032
Query: 991 SIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+I+ RL++ L+A+E L +F + ++ + E + + ++ + + ER
Sbjct: 1033 AIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGK-NYER 1091
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE LGD FLK A LF + DE + R + N NL A + + YIR + F
Sbjct: 1092 LEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGF 1151
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G +H + D + ++ S+G H L +KTIADV EA
Sbjct: 1152 SRHIWYPDGLTL-----------LHGK-------DHSTKL-LSEGKHALGEKTIADVCEA 1192
Query: 1162 LVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLD-- 1211
L+GA + G KA +A + +V +T + S D
Sbjct: 1193 LIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKYQTEKHRGSEDDL 1252
Query: 1212 MATLEILLGHQFLHRGLLLQAFVHPSFNRLGG----CYQRLEFLGDAVLDYLITSYLYSV 1267
+E LG+ F + LL A HPS G CYQRLEFLGD++LD + L+
Sbjct: 1253 ARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRR 1312
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
+P P L++ + +V+N+ ++V F++ ++ SN L I +YV+ + T +
Sbjct: 1313 FPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIETAQAES 1372
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
+ V + P PK L D+VE+ LGAI +DS F+ +
Sbjct: 1373 QGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSKFDFQVI 1411
>sp|A2RAF3|DCL1_ASPNC Dicer-like protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl1 PE=3 SV=2
Length = 1525
Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 305/648 (47%), Gaps = 79/648 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQLEL ++A +N I L TG GKT IAVLL+ EL + I FL +
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 177
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ ++ V F G L S W++ + V+V +IL CL +
Sbjct: 178 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 237
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIM-KVPRIFGMTASPVVGKGASA 232
+IKM I +LIFDE HH K +HPYA+I++D Y ++ K PRIFGMTASP+ KG
Sbjct: 238 YIKMSQINILIFDEAHH--TKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG--- 292
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY------- 285
++ LE LLD+++ + + L PV RV+ + + ++S
Sbjct: 293 --DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDR 350
Query: 286 ---VTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQ-LNRLHDSMKFCLENLGVCGAL 341
+ C E + Q S L R D R L +L S++ +
Sbjct: 351 FGDMACLEGIFRFAW-QASSELGRWCSDRAWARALADDVLPKLEGSVRKTANSETSSNVP 409
Query: 342 HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLK 401
++Y E +R E + I S +A + E F + + ++VL+
Sbjct: 410 ESAY-----KEILRI----TEASEIVKS---YAFSSPETFGQLSPK---------VQVLR 448
Query: 402 EPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ--NLKFLASWRCHFLV 459
E +L R G Q KCIVF + TA L+ + Q N+ FL R L+
Sbjct: 449 E-----ELARYFG------RQTETKCIVFTQKRYTALILAELFQTLNIPFL---RPGVLI 494
Query: 460 GVN----AGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETV 515
GV AG+ R S++ KFR+GE+N L AT V EEGLDI C LV+RFDL +T+
Sbjct: 495 GVRSGDLAGMNITFRQQFISLV-KFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTL 553
Query: 516 ASFIQSRGRARMPQSEYAFLVDSGN----QREL-----DLIKNFSKE--EDRMNREIMDR 564
++QSRGRAR S YA +V+ GN QR L +++++F + EDR+
Sbjct: 554 IQYVQSRGRARHFNSTYASMVERGNLEHEQRLLEVQDAEMMQSFCRTLPEDRLLYGFDHD 613
Query: 565 TSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGT 624
+ R +++ S+GA ++ ++L RY S L +++ F+ + + G
Sbjct: 614 LDTVLQKDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGAF 673
Query: 625 ICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+C +ILP +PI + G+P AK+ A L K L+D+
Sbjct: 674 VCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHF 721
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 207/476 (43%), Gaps = 57/476 (11%)
Query: 928 HPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLS 987
H QP+LRA+ + RNLL K+ D+E F + P LK+ S
Sbjct: 966 HWDQPVLRAELVRLRRNLLD--KMTDTERDVETRCFICIEP----LKVSAIPASTAFSCL 1019
Query: 988 LLPSIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFS 1038
P+I+ R++ L++++ L+ +F + ++ + E + + ++ R +
Sbjct: 1020 AFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGR-N 1078
Query: 1039 LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRD 1098
ERLE LGD FLK A LF + DE + R + N NL A + YIR
Sbjct: 1079 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1138
Query: 1099 QPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADV 1158
+ F ++ G + + K+ R ++ H L +KTIADV
Sbjct: 1139 RGFSRHTWYPEGLKL--LQGKDHSRKA-----------------TTESKHALAEKTIADV 1179
Query: 1159 VEALVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSAS 1209
EAL+GA + G KA T + + E ++ I + A
Sbjct: 1180 CEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWKDYISFYTIPKYQRRAADGAE 1239
Query: 1210 LDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLITSYLY 1265
L ++ +E L ++F + LL AF HPS+ CYQRLEFLGD+++D + L+
Sbjct: 1240 LYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSLIDMVCVEDLF 1299
Query: 1266 SVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSS 1325
+ +P P LT+ + +V+N+ +AV + L + S L I Y + + T
Sbjct: 1300 ARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQYAEEIQTAEG 1359
Query: 1326 TRE-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
E V + P PK L D+VE+ +GA+ +DS FN + + ++ P +
Sbjct: 1360 ESEGAVDYWTVTKDP--PKCLPDMVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFE 1413
>sp|A1DE13|DCL1_NEOFI Dicer-like protein 1 OS=Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / FGSC A1164 / NRRL 181) GN=dcl1 PE=3 SV=1
Length = 1538
Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 198/647 (30%), Positives = 305/647 (47%), Gaps = 76/647 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ EL + + FL +
Sbjct: 128 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDNRANGKPHRVSFFLVDS 187
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V L QQA V+ +I V F G L W++ + + V+V +IL CL +
Sbjct: 188 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDEHLQRNMVIVCTAEILNQCLLNS 247
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKD-FYKPDIMKVPRIFGMTASPVVGKGASA 232
++KM+ I LLIFDE HHA K +HPYA+I++D ++K + PR+FGMTASP+ KG
Sbjct: 248 YVKMDQINLLIFDEAHHA--KKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG--- 302
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQL 292
++ ++ LE LLD+++ + L VS P+ +V+ Y N S + T +L
Sbjct: 303 --DITEAATRLETLLDSRIATTSKITLLREVVSRPIEKVWAY----NRLESPFAT---EL 353
Query: 293 AEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD- 351
++ +Y K L ++ LG + A + L+ D
Sbjct: 354 YKLMDTRY---------------GNIKVLEGVYRFAWHASSELGKWCSDRAWWHALADDV 398
Query: 352 ----ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR-RDGIASDLSCIEVLKEPFFS 406
E ++L+E+ NT++ ++ VF I R R+ AS+ +P
Sbjct: 399 LPKLEGNISKLVES--NTLN-------AEHGAVFKDIIRIRE--ASETVKNYSFADPELP 447
Query: 407 KKLLRLIGILSTFRLQQHM------KCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG 460
+L + +L L +H KCIVF + TA+ L+ + L + R L+G
Sbjct: 448 GELSPKVQLLR-MELSKHFSDTTGTKCIVFTQKRYTAKILNELFTVLN-IPHLRPGVLIG 505
Query: 461 VNAG-LKSMSRNAMKSILE--KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVAS 517
V G + M+ + L KFR+GE+N L AT V EEGLDI C LV+RFDL T+
Sbjct: 506 VRPGDIGGMNVTFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQ 565
Query: 518 FIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR--------EIMDRTSSDA 569
++QSRGRAR S YA +V+ N +K + E M R I+ D
Sbjct: 566 YVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAEKIMQRFCETLPEDRILHGNDHDL 625
Query: 570 FTCSEE----RIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI 625
+ +E R + V S+GA ++ +++L RY S L +++ P+ + +
Sbjct: 626 DSLLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVGHVSNAYV 685
Query: 626 CHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
C +ILP +PI + G+P AK+ A L K L+DY
Sbjct: 686 CEVILPEKSPIRGLTGSPAIRKAVAKQSAAFDTCLLLRKHRLLDDYF 732
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 209/461 (45%), Gaps = 58/461 (12%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L+A+ + RNLL K+ E E F P L+I I S+ P
Sbjct: 980 QPVLQAELVRLRRNLLD--KMTTQEKEMQTECFICAEP----LRISAIPTSIVSTCLAFP 1033
Query: 991 SIMHRLENLLVAIELKHLLS---------ASFPEGAEVSAEMLLKALTTEKCQERFSLER 1041
+I+ RL++ L+A+E L +F + ++ + E + + ++ + + ER
Sbjct: 1034 AIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGK-NYER 1092
Query: 1042 LEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPF 1101
LE LGD FLK A L+ + DE + R + N NL A + + YIR + F
Sbjct: 1093 LEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRSRGF 1152
Query: 1102 DPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEA 1161
++ G + K+ + + S+G H L +KTIADV EA
Sbjct: 1153 SRHIWYPDG--LTLLHGKDHSKKL-----------------LSEGKHALGEKTIADVCEA 1193
Query: 1162 LVGAFIDDSG--------FKAATAFLKWIGIQVEFEASQVTNICISS-KSFLPLSASLDM 1212
L+GA + G KA TA + +V +T + ++ P + D+
Sbjct: 1194 LIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYITLYTMPKYQTEKPRGSEDDL 1253
Query: 1213 AT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG----CYQRLEFLGDAVLDYLITSYLYSV 1267
A +E LG+ F + LL A HPS G CYQRLEFLGD++LD + L+
Sbjct: 1254 ARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQRLEFLGDSLLDMVCVEDLFRR 1313
Query: 1268 YPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTR 1327
+P P LT+ + +V+N+ ++V F++ ++ SN L I +YV+ + + +
Sbjct: 1314 FPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNPLQAQITHYVEEIESAQAES 1373
Query: 1328 E-------VKEGPRCPKVLGDLVESSLGAILLDSGFNLNTV 1361
V + P PK L D+VE+ LGAI +DS F+ +
Sbjct: 1374 RGAVDYWVVAKDP--PKCLPDMVEAYLGAIFVDSKFDFQVI 1412
>sp|P34529|DCR1_CAEEL Endoribonuclease dcr-1 OS=Caenorhabditis elegans GN=dcr-1 PE=1 SV=3
Length = 1910
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 275/1066 (25%), Positives = 470/1066 (44%), Gaps = 160/1066 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKS---ICIFLAPTVA 116
R YQ+EL KA ++N IV LGTG GKT IAVLL+ E + P F+ V
Sbjct: 14 RDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKRAFFVVEKVN 73
Query: 117 LVQQQAKVIEESIGFKVRTFCG----GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
LV+QQA IE FKV G G K CD + + ++ V+V+ Q LL + H
Sbjct: 74 LVEQQAIHIEVHTSFKVGQVHGQTSSGLWDSKEQCD--QFMKRHHVVVITAQCLLDLIRH 131
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDF--YKPDIMKVPRIFGMTASPVVGKGA 230
++K+E + +LIFDECHHA + S HPY IM D+ K D VPR+ G+TAS + K
Sbjct: 132 AYLKIEDMCVLIFDECHHA-LGSQHPYRSIMVDYKLLKKD-KPVPRVLGLTASLI--KAK 187
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCS- 289
A L + + LE+ +D+ + + D L + + P Y+ + D +
Sbjct: 188 VAPEKLMEQLKKLESAMDSVIETASDLVSLSKYGAKP----YEVVIICKDFEIGCLGIPN 243
Query: 290 -EQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFC---LENLGVCGALHASY 345
+ + EI E ++ ++ H L ++ + DS+K LG A +
Sbjct: 244 FDTVIEIFDET-VAFVNTTTEFHPDLDLDPRR--PIKDSLKTTRAVFRQLGPWAAWRTAQ 300
Query: 346 ILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRR-DGIASDLSCIEVLKEPF 404
+ E ++I+++ + D RF + A I R + + IE L+ P+
Sbjct: 301 VW----EKELGKIIKSQ--VLPDKTLRFLNMAKTSMITIKRLLEPEMKKIKSIEALR-PY 353
Query: 405 FSKKLLRLIGILSTFRLQ-----------QHMKCIVFVNRIVTARALSYILQNLKFLASW 453
++++RL IL TF + +H+ I+FV++ A +L +++++K SW
Sbjct: 354 VPQRVIRLFEILETFNPEFQKERMKLEKAEHLSAIIFVDQRYIAYSLLLMMRHIK---SW 410
Query: 454 RCHF-LVGVNAGLKSMSRNAMKS-----------ILEKFRSGELNLLVATKVGEEGLDIQ 501
F V + + + RN S +L +F E+N L+AT V EEG+D++
Sbjct: 411 EPKFKFVNPDYVVGASGRNLASSDSQGLHKRQTEVLRRFHRNEINCLIATSVLEEGVDVK 470
Query: 502 TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQRELDL-IKNFSKEED----- 555
C LVI+FD P + S++QS+GRAR S Y V+ + D +K+F + E
Sbjct: 471 QCNLVIKFDRPLDMRSYVQSKGRARRAGSRYVITVEEKDTAACDSDLKDFQQIEKILLSR 530
Query: 556 --RMNREIMDRTSSDAF----TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFF 609
+N I D SD F S+ Y V+ +GA + ++L++RYCSKLP D F
Sbjct: 531 HRTVNNPIED--DSDRFEEFDVDSQMEPYVVEKTGATLKMSTAIALINRYCSKLPSDIFT 588
Query: 610 N--PKPKFYYFDDLGGT--ICHIILPANAPI-HQIV-GTPQSSMEAAKKDACLKAIEDLH 663
P + ++ G T ++LP N+PI H IV P + + A+ L+A LH
Sbjct: 589 RLVPHNQIIPIEENGVTKYCAELLLPINSPIKHAIVLKNPMPNKKTAQMAVALEACRQLH 648
Query: 664 KLGALNDYLLPQEDNA-------TEDEPMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSW 716
G L+D LLP+ + ++EP ++ + G R +L++ + L +S+
Sbjct: 649 LEGELDDNLLPKGRESIAKLLEHIDEEPDEYAPGIAAKVGSSKRKQLYDKKIARALNESF 708
Query: 717 TKSQ-----YPVRLN-FYFMQFIPDPADRIYRE-------FGLFVKSLLPG--------E 755
++ Y L F + +P R + + FG +P
Sbjct: 709 VEADKECFIYAFELERFREAELTLNPKRRKFEDPFNYEYCFGFLSAKEIPKIPPFPVFLR 768
Query: 756 AEHLKVDLHLARGRSVMTKLVPSGIMQAQQFQE-MFLKVILDRSEFNSEFVPLGKDDYCE 814
++KV L +A ++ +T + + + Q F +F +V+ N EF D
Sbjct: 769 QGNMKVRLIVAPKKTTVTA---AQLQEIQLFHNYLFTQVLQMCKTGNLEF-----DGTSN 820
Query: 815 SSSSTFYLLLPVIFHKNSVDWKIIRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWS-S 873
+ +T L++P+ K+ + + I + +S V + +++P ++ + +
Sbjct: 821 APLNT--LIVPLNKRKDDMSYTINMKYVSEVV-------ANMENMPRIPKDEVRRQYKFN 871
Query: 874 ESDVENSLVYATHKKW----FYLVTNIVFEKNGYSPYKDSDSSSHVDHLISSYGIHLKHP 929
D ++++V ++ FY V I+ E S + D+ + ++ I Y + +
Sbjct: 872 AEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPSSKFPDTHFETFNEYFIKKYKLEIYDQ 931
Query: 930 KQPLLRAKPLFRLRNLLHNR-----------------KLEDSESHELEEYFDDLP----- 967
Q LL NLL R + + + + +E +P
Sbjct: 932 NQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNTSVPHSSQR 991
Query: 968 ----PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLL 1009
PEL + I S + + ++ LPSI +R+ LL+ EL+ +
Sbjct: 992 QILVPELMDIHPI--SATLWNVIAALPSIFYRVNQLLLTDELRETI 1035
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 207/464 (44%), Gaps = 95/464 (20%)
Query: 1016 GAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVD--EGELTRR 1073
G VS +LL ALTT + SLER E +GD+FLK+A +L+ H +D EG+L+
Sbjct: 1389 GLGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLY--HTLLDQHEGKLSFA 1446
Query: 1074 RSNAVNNSNLLKLAARNNLQVYIRDQPFD-------PCQFFALGRRCPRI-----CSKET 1121
RS V+N NL +L + + I FD PC + P E
Sbjct: 1447 RSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEI 1506
Query: 1122 ERTIHSQYDGRAPD-----DLNAEVRCSKG----------------------------HH 1148
ER + Q P+ D+ +V S
Sbjct: 1507 ERILDGQVIEEKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQ 1566
Query: 1149 WLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--EFEASQV-----------TN 1195
+ K+IAD VEAL+G + G + W+G++V + + S V TN
Sbjct: 1567 HISDKSIADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTN 1626
Query: 1196 ICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
S L LE +G++F R L+QAF H S+ NR+ GCYQRLEFLGD
Sbjct: 1627 PNASLNFLNNLWQQFQFTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGD 1686
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI---------- 1303
AVLDY+IT YL+ + PG LTDLRS LVNN FA++AV F K I
Sbjct: 1687 AVLDYMITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMI 1746
Query: 1304 -----------FDSNVLSETINNYVDYMITPSSTREVKEGP--RCPKVLGDLVESSLGAI 1350
FD+N +E YM+T + + PK +GD+ ES GAI
Sbjct: 1747 EKFVKLCSERNFDTNFNAEM------YMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAI 1800
Query: 1351 LLDSGFNLNTVWKIMLSFLDPILKF--SNLQLNPIRELLELCNS 1392
LDSG NL+T W+++ + ++ +N +PIREL+E S
Sbjct: 1801 YLDSGRNLDTTWQVIFHMMRGTIELCCANPPRSPIRELMEFEQS 1844
>sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 /
CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl2 PE=3
SV=1
Length = 1389
Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 201/677 (29%), Positives = 310/677 (45%), Gaps = 103/677 (15%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + +M+ENIIV + TG GKTHIAVL I A L P I FLAPTVAL
Sbjct: 16 ARNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK--AELDSCPPDKIIWFLAPTVALC 73
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ KVI ++ + RT G K W+ + V+V +L L H F+
Sbjct: 74 TQQHKVIASNLPAVQTRTLTGLDKVELWTEQAIWDAILKDVRVVVSTYAVLADALSHGFM 133
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGA 230
+M +AL+IFDE HH K H KIM+DFY P + K VPRI G+TASPVV
Sbjct: 134 RMSRLALIIFDEAHHCMRK--HAANKIMQDFYHPTVSKFGPSAVPRIMGLTASPVVRSNR 191
Query: 231 SAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGP-------VINDTS 282
+ + ++E LDA + ++L F P ++ Y P V + T
Sbjct: 192 -------EELFTIETNLDAVCKTPRAHRQELLKFSHRPELKQLLYEPPDPMGLQVSSQTL 244
Query: 283 SSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLEN 334
+ + E L +I+ + Y+ L + D +L +QL R D + E
Sbjct: 245 RALIEAWETL-DIEDDPYVKRLRKSSLDGGALEKALMTGKTFCREQLKRFVDRSRHIFEE 303
Query: 335 LGVCGALHASYILLSGDET------MRNELIEAEGNTIDDSLCRFASQASEVFAAICRRD 388
LG A + Y + +T M + EAE + L + + ++
Sbjct: 304 LGEWAADYYIYTSIQHLKTRVQTSYMTGDWDEAERAYLVSFLSKLPAADIQI-------- 355
Query: 389 GIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NL 447
SD +C+ + S KL LIG L ++FV + T ++ +L +
Sbjct: 356 -TLSDAACLRI------SPKLEALIGFLDAMD-DPEFSGLIFVKQRATVSVMTDLLAVHP 407
Query: 448 KFLASWRCHFLVGVN--AGLKS-----MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+ +R VG + +G K +S + S L+ FRSG NL++AT V EEG+DI
Sbjct: 408 RTRERFRSAAYVGWSNSSGSKDFLGNLLSMHGQLSTLDDFRSGHKNLIIATDVLEEGIDI 467
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNFS 551
C +V+ +D P + SF+Q RGRAR QS YA + + + E +I+ +
Sbjct: 468 SACSVVVCYDKPPNLKSFVQRRGRARQKQSTYAIMFPAEDSAFDLAKWQTLEQAMIEAYQ 527
Query: 552 KEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK 602
+E +R+N E+++R + V+S+ A ++A ++ LH +C+
Sbjct: 528 DDERHLQSAIELERVNEEVVER-------------FTVESTSAVLTADTAMAHLHHFCAV 574
Query: 603 LPHDEFFNPKPKFYYFDDLGGTICHIILPANAPIHQIVGTPQS-----SMEAAKKDACLK 657
LP + + +P F D+ I++ N +H V + + AA K+A +
Sbjct: 575 LPSQPYVDMRPVFSVETDIANLRRGIVILPNC-VHPKVRRSEGQRWWRTERAAMKEAAFQ 633
Query: 658 AIEDLHKLGALNDYLLP 674
A + L++ G +ND LLP
Sbjct: 634 AYKSLYEFGLVNDNLLP 650
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 200/473 (42%), Gaps = 90/473 (19%)
Query: 938 PLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIG----------FSKDIGSSLS 987
P R RNLLH + L + +LE +D P + +++ + FS I L
Sbjct: 851 PFPRRRNLLHRQTLA---TKKLENDKEDTPEPVNKMRTVAADQCTIDRLPFSNAI---LG 904
Query: 988 LLPSIM-HRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILG 1046
L S++ +LE L+A +L + + S + ++ A++ Q + +R E LG
Sbjct: 905 LFISVVVQQLETELIATKLYETI---LRDVGFTSTQHIITAISAPSAQALTNYQRYEFLG 961
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D+ LK++V LF H EG L+ R V N L K A L ++ + F P ++
Sbjct: 962 DSILKFSVSCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKW 1021
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
A + S+ ER G + K +ADVVEAL+GA
Sbjct: 1022 SA------PLISERLERV--------------------AGKRQVSSKVLADVVEALIGAA 1055
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLH 1225
D G AA A ++ ++ + + S+S P A + L+ + + F +
Sbjct: 1056 YMDGGHAAAQACIRRFLPEINLHSLDTRTL---SRSVAPEGARQTIHDRLKRHISYTFEN 1112
Query: 1226 RGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
LL++A HPS ++ YQRLEFLGDAVLD +I S +++ ++ G +T ++ L
Sbjct: 1113 ESLLVEALTHPSCDYDASTQSYQRLEFLGDAVLDMIIVSAIFNHPVQMPQGHMTKIKHAL 1172
Query: 1284 VNNQAFA-----------NVAVDQ-SFYKFLIFDSNVLSE----------TINNYVDYMI 1321
VN A +V+Q S +F + + L E +NN D +
Sbjct: 1173 VNANLLAFLCMEFAIPEERASVEQISTLQFEVISNEELVELWRFMRYRGLDLNNARDASL 1232
Query: 1322 TPSST------REVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
++ P P K D++ES LGAI +DSG +L
Sbjct: 1233 ARHRALRDEILHSLQHDPHYPWQALSRLSADKFFSDIMESILGAIFVDSGGDL 1285
>sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=dcl2 PE=3 SV=2
Length = 1388
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 317/684 (46%), Gaps = 104/684 (15%)
Query: 52 DKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHL-IRKPQKSICIF 110
D P Q R YQLE+ + +M+ENIIV + TG GKTHIAVL I A L I P K + F
Sbjct: 10 DASPYQ-PRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK--AELDICSPDK-VVWF 65
Query: 111 LAPTVALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILL 167
LAPTVAL QQ +VI ++ + RT G K W+ ++ Y V+V +L
Sbjct: 66 LAPTVALCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVSTHAVLA 125
Query: 168 YCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTA 222
L H F+KM +ALLIFDE HH + H KIM+DFY P + K VPRI G+TA
Sbjct: 126 DALSHGFVKMSQLALLIFDEAHHCTRR--HAANKIMQDFYHPTLTKSGPAAVPRIMGLTA 183
Query: 223 SPVVGKGASAQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPV---- 277
SPVV + + +E+ LDA + ++L F P ++ Y P
Sbjct: 184 SPVVRSNH-------QELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPTDPAG 236
Query: 278 ---INDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHD 326
+ T + E L +I + YI L + D ++L+ +QL R D
Sbjct: 237 FRSASLTLGALYHAWENL-DIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRRFVD 295
Query: 327 SMKFCLENLGVCGALHASYILLSG------DETMRNELIEAEGNTIDDSLCRFASQASEV 380
+ E LG A + Y + D M + EAE + D L + + S++
Sbjct: 296 RSRHIFEELGEWAAEYYIYASIKQLRDRVRDSYMSGDWDEAEKAYLVDFLSKIPT--SDI 353
Query: 381 FAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
A+ DG S K L+ L + Q+ ++FV + VT A+
Sbjct: 354 HFALNDPDGFR-------------ISPKFESLLNFLDSSD-QREFSGLIFVKQRVTVSAM 399
Query: 441 SYILQNLKFLAS-WRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATK 492
+ +L + +RC VG + S ++ + L+ FRSG NL++AT
Sbjct: 400 TSLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATD 459
Query: 493 VGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL-------VDSGNQRELD 545
V EEG+D+ C +V+ +D P + SFIQ RGRAR QS +A + D ++L+
Sbjct: 460 VLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSADVSRWQDLE 519
Query: 546 --LIKNFSKEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVS 594
+I+ + +E + ++ E+M+R + DS+ A ++A ++
Sbjct: 520 QAMIEAYQDDERQLQSVSALESLDEEVMERLTG-------------DSTSAVLTADMAMA 566
Query: 595 LLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQSSME-AA 650
LH +C+ LP + + +P F + + G + +ILP+ + + + G E AA
Sbjct: 567 HLHHFCAVLPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAA 626
Query: 651 KKDACLKAIEDLHKLGALNDYLLP 674
K+ +A + L++ G +ND+LLP
Sbjct: 627 MKETAFQAYKSLYEFGLVNDHLLP 650
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 197/475 (41%), Gaps = 87/475 (18%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD-------LPPELCQLKIIGFSKDIGSSL 986
L P RN L + L +S+ +++E D + E C + + F+ I
Sbjct: 847 LECAPFPHRRNFLRRQTLANSQV-DVDEAIPDSAAKNPIVAAEACTIDRLPFTMAIFGLF 905
Query: 987 SLLPSIMHRLENLLVAIELKH--LLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
+ +I+ +LE L+A L+ L SF S + ++ A++T + +R E
Sbjct: 906 --ISAIVEQLEIELIATRLRDTILRDVSFK-----STDHIITAISTPLAHRLTNYQRYEF 958
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPC 1104
LGD+ LK++V LF H EG L+ R V N L K A L YI +
Sbjct: 959 LGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIVTK----- 1013
Query: 1105 QFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG 1164
R+ S++ + S+ GR P + K +ADVVEAL+G
Sbjct: 1014 ----------RLASRKWSAPLISEKLGRVP-----------AKRQMSTKVLADVVEALIG 1052
Query: 1165 AFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQF 1223
A D G A A ++ ++ A + +++S P SA M L+ +G+ F
Sbjct: 1053 AAYVDGGHSTAQACIRRFLPEINLHA---VDTRTAARSVAPESARHMMNDRLKDHIGYTF 1109
Query: 1224 LHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
LL++A HPS ++ YQRLE+LGDAVLD +I S +++ + G +T ++
Sbjct: 1110 EDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIKH 1169
Query: 1282 MLVN------------------------NQAFANVAVDQS--FYKFLIFDSNVLSETINN 1315
+VN +FA + +S ++F+ + L +
Sbjct: 1170 AVVNANLLAFLCMEFAISEEKLDVAQTSKDSFAVTSSQESVELWRFMRYRGQGLKAARDA 1229
Query: 1316 YV--DYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+ + + + P P K D++ES LGAI +DSG NL
Sbjct: 1230 SLARHRALRDEIASSLLQAPHYPWHALSRLNADKFFSDIIESVLGAIFVDSGGNL 1284
>sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / FGSC A1164 / NRRL 181) GN=dcl2 PE=3 SV=1
Length = 1388
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 199/677 (29%), Positives = 313/677 (46%), Gaps = 105/677 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQLE+ + +M+ENIIV + TG GKTHIAVL I A L P + FLAPTVAL
Sbjct: 17 RNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK--AELDICPPDKLVWFLAPTVALCI 74
Query: 120 QQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIK 176
QQ +VI ++ + RT G K W+ ++ Y V+V +L L H F+K
Sbjct: 75 QQHEVIASNLPAVRTRTLTGLDKVELWTEQSIWDAVLNGYRVIVSTHAVLADALSHGFVK 134
Query: 177 MELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGAS 231
M +ALLIFDE HH + H KIM+DFY P + K VPRI G+TASPVV
Sbjct: 135 MSRLALLIFDEAHHCTRR--HAANKIMRDFYHPTLTKSGPGAVPRIMGLTASPVVRSNH- 191
Query: 232 AQANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ + ++E+ LDA + ++L F P ++ Y P + + + S+
Sbjct: 192 ------QELLTVESNLDAVCRTPRVHRQELVKFTHRPHLQQIWYTPT---DPAGFKSASQ 242
Query: 291 QLA---------EIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLE 333
L +I + YI L + D +L+ +QL R D + E
Sbjct: 243 TLGALYHAWETLDIGDDPYIQRLRKSPLDDTALKKALLTGKTYCREQLRRFVDRSRHIFE 302
Query: 334 NLGVCGALHASYILLS--GDET----MRNELIEAEGNTIDDSLCRFASQASEVFAAICRR 387
LG A + Y + GD M + EAE + D L + ASE+ A+
Sbjct: 303 ELGEWAAEYYIYASIKQLGDRVRNSYMSGDWDEAEKAYLVDFLSKIP--ASEIQLAL--- 357
Query: 388 DGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-N 446
+D + S K L+ L + ++ ++FV + T A++ +L +
Sbjct: 358 ----NDPGSFRI------SPKFESLLNFLDSLD-EREFSGLIFVKQRATVSAMTSLLSVH 406
Query: 447 LKFLASWRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+RC VG + G S ++ + L+ FRSG NL++AT V EEG+D
Sbjct: 407 PCTRERFRCAAYVGWSNGSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGID 466
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL---------VDSGNQRELDLIKNF 550
I C +V+ +D P + SF+Q RGRAR QS +A + V E +I+ +
Sbjct: 467 ISACSVVVCYDKPPNLKSFVQRRGRARRKQSTFAIMFPTDDASADVSKWQDLEQAMIEAY 526
Query: 551 SKEE---------DRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+E + ++ E+M+R + V+S+ A ++A ++ LH +C+
Sbjct: 527 QDDERQLQSVSALESLDEEVMERLT-------------VESTSAVLTADMAMAHLHHFCA 573
Query: 602 KLPHDEFFNPKPKFYYFDDLGGTI-CHIILPA--NAPIHQIVGTPQSSME-AAKKDACLK 657
LP + + +P F + + G + +ILP+ + + + G E AA K+ +
Sbjct: 574 VLPPQPYADMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQ 633
Query: 658 AIEDLHKLGALNDYLLP 674
A + L++ G +ND+LLP
Sbjct: 634 AYKALYEFGLVNDHLLP 650
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 200/473 (42%), Gaps = 83/473 (17%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEYFDD------LPPELCQLKIIGFSKDIGSSLS 987
L P RNLLH ++L +S+ EE + + + C + + F+ I
Sbjct: 847 LECAPFPHRRNLLHRQRLANSQVDVDEETPESAAKNPIVAADACTIDRLPFTMAIFGLF- 905
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+ +I+ RLE L+A L+ + + S + ++ A++T + +R E LGD
Sbjct: 906 -ISAIVERLETELIATRLRETI---LRDVGFKSTDHIITAISTPFAHALTNYQRYEFLGD 961
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK++V LF H EG L+ R+ V N L K A L YI +
Sbjct: 962 SILKFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAYIVTK-------- 1013
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
RI S++ + S+ R P + K +ADVVEAL+GA
Sbjct: 1014 -------RIASRKWSAPLISEKLERVP-----------AKRQMSTKVLADVVEALIGAAY 1055
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDM-ATLEILLGHQFLHR 1226
D G A A ++ + ++ A + +++S P SA M L+ +G+ F
Sbjct: 1056 MDGGHATAQACIRRLLPEINLHA---VDTRTATRSVAPESARHMMNERLKDHIGYTFEDE 1112
Query: 1227 GLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKP-GQLTDLRSML 1283
LL++A HPS ++ YQRLE+LGDAVLD +I S +++ +P +P G +T ++ +
Sbjct: 1113 SLLVEALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFN-HPIQRPQGDMTKIKHAV 1171
Query: 1284 VNNQAFANVAVDQS--------------------------FYKFLIFDSNVLSETINNYV 1317
VN A + ++ + ++F+ + L+ + +
Sbjct: 1172 VNANLLAFLCMESATSEEKLDVAQTSKDSFAVTTSQESVELWRFMRYRGQNLNAARDASL 1231
Query: 1318 --DYMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+ + P P K D+VES LGAI +DSG +L
Sbjct: 1232 ARHRALRDEIASSLLHAPHYPWHALSRLNADKFFSDIVESVLGAIFVDSGGDL 1284
>sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dcr1 PE=1 SV=1
Length = 1374
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 323/689 (46%), Gaps = 68/689 (9%)
Query: 57 QIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI---YELAHLIRKP---QKSICIF 110
Q+ RKYQ ++ A ++N ++ + TG GKT +AV LI E LI++ K I +F
Sbjct: 10 QLLRKYQQDVYNIASKQNTLLVMRTGAGKTLLAVKLIKQKLEEQILIQESNLEHKKISVF 69
Query: 111 LAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCL 170
L V LV QQA+ I + KV F G S I +Y V+V+ + L
Sbjct: 70 LVNKVPLVFQQAEYIRSQLPAKVGMFYGELSIEMSEQLLTNIILKYNVIVITADLFYLFL 129
Query: 171 YHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY---KPDIMK----VPRIFGMTAS 223
F+ + + L+IFDECHHA N YA+IM DFY K + K +PRIFGMTAS
Sbjct: 130 ARGFLSINDLNLIIFDECHHAI--GNDAYARIMNDFYHRAKAVLSKKHFTLPRIFGMTAS 187
Query: 224 PVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSS 283
P GK + NL + E L D+K + V + E L + P
Sbjct: 188 PFTGK----KGNLYHRLYQWEQLFDSKAHVVSENE-LADYFCLP--------------EE 228
Query: 284 SYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHA 343
SYV S +L + I L + + K L +++ ++G+
Sbjct: 229 SYVMYSNKLVVPPSDSIIKKCEETLQGCKLISRAVK--TALAETI-----DMGLWFGEQV 281
Query: 344 SYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP 403
L+ ET R + +A G + D A ++F + + + + I V
Sbjct: 282 WLYLVDFVETKRLKK-KALGKQLSDDE-ELAIDRLKIFVEDWKNNKYSDNGPRIPVFDST 339
Query: 404 FFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVG-- 460
+ K+ +L+ +L +T+R ++ ++FV R TA LS ++ L L + R H +G
Sbjct: 340 DVTDKVFKLLELLKATYRKSDSVRTVIFVERKATAFTLSLFMKTLN-LPNIRAHSFIGHG 398
Query: 461 -VNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
+ G SM+ K L KF++G+ N+L+AT V EEG+D+ +C LVIRF++ TV ++
Sbjct: 399 PSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYV 458
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSS---DAFTCSE-E 575
QSRGRAR S++ + N EL + + EE + + + ++S D+ C E E
Sbjct: 459 QSRGRARAMASKFLIFL---NTEELLIHERILHEEKNLKFALSELSNSNIFDSLVCEERE 515
Query: 576 R-----IYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC-HII 629
R +Y+V +GA ++ Y VSLL+ +C+ L D + P F L G C +
Sbjct: 516 RVTDDIVYEVGETGALLTGLYAVSLLYNFCNTLSRDVYTRYYPTFTAQPCLSGWYCFEVE 575
Query: 630 LPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATEDEPMLFSS 689
LP + G+P S+ AK++A DL ++G ++ +L P + + L +
Sbjct: 576 LPKACKVPAAQGSPAKSIRKAKQNAAFIMCLDLIRMGLIDKHLKPLDFRRKIAD--LETL 633
Query: 690 DSDSYEGEGSRGELHEMLVPAVLRQSWTK 718
+ D + EG E +E VP +SW K
Sbjct: 634 EEDELKDEG-YIETYERYVP----KSWMK 657
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 213/468 (45%), Gaps = 66/468 (14%)
Query: 927 KHPKQP--LLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGS 984
K K P L + PL +L NR +S ++ ++ + L I+ S+ + +
Sbjct: 827 KKDKAPSALCKKLPLRLNYSLWGNRAKSIPKSQQVRSFY------INDLYILPVSRHLKN 880
Query: 985 SLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM--LLKALTTEKCQERFSLERL 1042
S L+PSI++ +ENLLVA +SF E + ++ +ALT+ + Q F +RL
Sbjct: 881 SALLIPSILYHIENLLVA--------SSFIEHFRLDCKIDTACQALTSAESQLNFDYDRL 932
Query: 1043 EILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFD 1102
E GD FLK +FL E +L R ++N NL K+A L Y P +
Sbjct: 933 EFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCELPKYALSTPLE 992
Query: 1103 PCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKG-HHWLHKKTIADVVEA 1161
+ CP K T +C L K IAD+VEA
Sbjct: 993 ------IRHWCPYGFQKSTSD------------------KCRYAVLQKLSVKRIADMVEA 1028
Query: 1162 LVGAFIDDSGFKAATAFLKWIGIQV-------EFEASQVTNICISSKSFLPLSASLDMAT 1214
+GA + DSG +A K + + + E+ N S + S +
Sbjct: 1029 SIGACLLDSGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYADSLRNVQFPYS---SY 1085
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCY---QRLEFLGDAVLDYLITSYLYSVYPKL 1271
+E +G+ F ++ LL AF+HPS G Y Q+LEFLGDAVLDY+I YLY YP
Sbjct: 1086 IEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYLYKKYPNA 1145
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREV-K 1330
G+LTD +S V N++ + + + +K++ +S + + I Y + + + RE
Sbjct: 1146 TSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELI---EAFRETAS 1202
Query: 1331 EGP------RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPI 1372
E P PK + D +E+ + AI LDSGF+L ++ ++ FL+ +
Sbjct: 1203 ENPWFWFEIDSPKFISDTLEAMICAIFLDSGFSLQSLQFVLPLFLNSL 1250
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
++L Y RLEF GD L + ++ +P + QL R +++N VA+D
Sbjct: 923 SQLNFDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCEL 982
Query: 1299 YKFLIFDSNVLSETINNYVDYMITPSSTREVKEG---PRCPKVLGDLVESSLGAILLDSG 1355
K+ + S L I ++ Y S++ + + K + D+VE+S+GA LLDSG
Sbjct: 983 PKYAL--STPLE--IRHWCPYGFQKSTSDKCRYAVLQKLSVKRIADMVEASIGACLLDSG 1038
Query: 1356 FNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSLK 1403
L++ KI S +L SN E N +DL+ SL+
Sbjct: 1039 --LDSALKICKSLSVGLLDISNWD--------EWNNYFDLNTYADSLR 1076
>sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl2 PE=3 SV=2
Length = 1377
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 196/667 (29%), Positives = 316/667 (47%), Gaps = 86/667 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-ELAHLIRKPQKSICIFLAPTVALV 118
R YQ E+ + +++ENIIV + TG GKTH+A+L I EL R+PQK I FLAPTVAL
Sbjct: 17 RNYQTEMFEASLQENIIVAMDTGSGKTHVALLRIMNELE--TRRPQKLIW-FLAPTVALC 73
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ VI +++ K RT G K W+ + +V+V +L + + F+
Sbjct: 74 FQQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSNGFV 133
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGA 230
++ + LLIFDE HH + HP +IM+DFY P ++K VP I G+TASPVV +
Sbjct: 134 RVSQLGLLIFDEAHHCMRR--HPANRIMQDFYHPTLVKQGPDAVPGILGLTASPVVRTNS 191
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPV-INDTSSSYVTC- 288
+ + ++N++ A ++L + P ++ Y PV I+D +S T
Sbjct: 192 QELSMIESNMNAICKTPRAH------RQELLTHTHRPHLQQIWYTPVNIDDPTSGTRTLR 245
Query: 289 ----SEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMKFCLENLG 336
+ + +++ + Y+ L R D ++L+ + L R + + LG
Sbjct: 246 ALIHAWETIDLEDDPYVKQLRRSTFDGKALQKALLTRKTYCNESLRRFVERSCHIFQELG 305
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
Y + + +R + IDDS E ++ +AS LS
Sbjct: 306 ---GWAVDYFIHASIRRLREK--------IDDSALMLDWDNEE-------KEYLASFLSN 347
Query: 397 IEVLK-------EPFF-SKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLK 448
I ++ E F S KL LI LS+ ++F + T L+ +L
Sbjct: 348 IATIQSDPPRRPEDFIPSPKLEALISFLSSTD-DSTFSGLIFAKQRATVTVLATLLSVHP 406
Query: 449 FLAS-WRCHFLVGVNAGLKS-------MSRNAMKSILEKFRSGELNLLVATKVGEEGLDI 500
+RC VG + G +S + L +FRSG+ NL+VAT V EEG+DI
Sbjct: 407 LTKDRFRCAAFVGWSGGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDI 466
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQ---------RELDLIKNFS 551
C +VI +D P V SF+Q RGRAR +S +A L + ++ E +I+ +
Sbjct: 467 SACSVVICYDKPANVKSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEAMIEAYQ 526
Query: 552 KEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNP 611
+E + + T ++ T ER ++V+S+GA ++A V+ LH +CS LP + +
Sbjct: 527 DDERKRCEALALETMAEVVT---ER-FEVESTGAVLTADTAVARLHHFCSILPQQPYVDN 582
Query: 612 KPKFYY-FDDLGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGA 667
+P+ + +D G LP+ + + + G + E AA K+A + + L++ G
Sbjct: 583 RPELSFEYDGTGRRRGTFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGL 642
Query: 668 LNDYLLP 674
LND+LLP
Sbjct: 643 LNDHLLP 649
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 42/328 (12%)
Query: 966 LPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL 1025
+P C + + F+ I + +I+ RLE L+A L + + S ++
Sbjct: 882 IPATACTIDRLPFTDTIFGLF--ISAILDRLEATLIATRLCETI---LQDVQFSSTRHVI 936
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLK 1085
A++ Q +R E GD+ LK+ V L++ H EG L+ R V N+ L +
Sbjct: 937 TAISAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLAR 996
Query: 1086 LAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSK 1145
A L +I + F P ++ A P I K E G+ P
Sbjct: 997 AALDVGLDAFILTRRFTPRKWTA-----PLISEKAVE------VAGKRP----------- 1034
Query: 1146 GHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLP 1205
L K +ADVVE+L+GA D G A ++ + ++E IC + +
Sbjct: 1035 ----LSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIE--------ICPITPPPVH 1082
Query: 1206 LSASLDMA-TLEILLGHQFLHRGLLLQAFVHPSFNRLGGC--YQRLEFLGDAVLDYLITS 1262
SA M +L+ LG+ F++ LL++A HPS YQRLEFLGDAVLD ++
Sbjct: 1083 ESAPHVMNDSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGDAVLDMVVVH 1142
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
+ + G++T ++ L N A
Sbjct: 1143 AMAHHAVECPQGEMTMIKHALTNANLLA 1170
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
YQR EF GD+VL + ++ LY +P G L++ R +V N A A+D F++
Sbjct: 950 YQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAFIL- 1008
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSG 1355
T + +I+ + + P KVL D+VES +GA +D G
Sbjct: 1009 ---TRRFTPRKWTAPLISEKAVEVAGKRPLSSKVLADVVESLIGAAYMDGG 1056
>sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasitica GN=DCL-2 PE=3 SV=1
Length = 1451
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 203/703 (28%), Positives = 318/703 (45%), Gaps = 110/703 (15%)
Query: 43 ESSVGAQKTDKD--PKQI----ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL 96
E S G + K+ PK I AR YQLE+ + +++ENII + TG GKTH+A+L I
Sbjct: 41 EDSPGGKPRPKEQLPKDIVKMDARAYQLEMLEASLKENIICAMDTGSGKTHVAILRIK-- 98
Query: 97 AHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLK--SHCDWEKEID 154
A L P+ + FL PTV+L QQ V++ I G+ ++ S W+ +
Sbjct: 99 AELEEMPEGQVVWFLTPTVSLCAQQYAVVKAQIPSVQTKIVTGADKVDSWSSTTWDGALL 158
Query: 155 QYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK- 213
+V++ PQ+LL L H F+ + +AL++FDE HH NH Y+++MK+FY K
Sbjct: 159 NVKVIITTPQVLLDALLHGFVNISSLALMVFDEAHHCN--KNHAYSRVMKEFYWESKTKH 216
Query: 214 --VPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYS-VEDAEDLESFVSSPVVR 270
VPRI G+TASPVV S S+ LE+ LDA S E+L + P +
Sbjct: 217 EPVPRILGLTASPVVRSDIS-------SLKRLESTLDAVCRSPTRHREELIANSQRPALF 269
Query: 271 VYQYGPVINDTSSSYVTCSEQLA------EIKREQYISALSRKLHDHQSLRNTTKQLNR- 323
Y P + ++ + +L I + Y+ +L ++ D +S R K +
Sbjct: 270 SIIYNPKLQPYAAGFSESLTKLMAARNKLNILEDPYVVSLRAEISD-RSRRKLEKAIKEK 328
Query: 324 ---LHDSMK-FCLENLGVC---GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQ 376
+ D+MK FC ++ + GA A + F S+
Sbjct: 329 RTYVQDTMKSFCRRSMEMAKELGAWAADW---------------------------FISE 361
Query: 377 ASEVFAAICRRDGIAS----DLSCIEVLK-------EP--------FFSKKLLRLIGILS 417
A +F A R G +S D I + + EP S+K+ R+I +L
Sbjct: 362 AIRLFLAGIYRQGASSKSFRDAEVIFLARVFQDANIEPPPPLTTHSGLSEKVQRIIEVLL 421
Query: 418 TFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WR------CHFLVGVNAGLKSMSR 470
+ + + I FV T LS+IL ++S +R F+ GV +
Sbjct: 422 NY--DKDARAICFVKERATTVVLSHILTTHPEVSSKFRIGTMVGTSFVPGVKRDFLDLPE 479
Query: 471 NAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQS 530
LE FR G N+LVAT V EEG+D+ C L+I FD P + +FIQ RGRARM QS
Sbjct: 480 TGGSQCLEAFREGRKNMLVATSVLEEGIDVPACNLIICFDKPNNLRAFIQRRGRARMRQS 539
Query: 531 EYAFLVDSGNQRELDLIKNFSK----EEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
V+ + + + ++ K +E R + + +S+A EE +V+S+GA
Sbjct: 540 HLYLFVEDEAEADWEALEAQMKLQYEDEKREHERLEAIENSEALDYPEE--LRVESTGAR 597
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKF--------YYFDDLGGTICHIILPANAP--I 636
++ S L + S L +F +P + Y D ++LP + P +
Sbjct: 598 LTINDAKSHLQHFVSTLASRKFVQTQPDYLIEKVSQGYQPGDQPLLKATVLLPVSVPQAL 657
Query: 637 HQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDN 678
Q+ + S + A DA +A + L++ G ++D+LLP D
Sbjct: 658 RQVTSSRTWVSEKNACMDAAFQAYKALYEAGLVDDHLLPLRDR 700
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 30/321 (9%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
L+PS++ E LVA EL + A + VS ML++A+ + + + ER+E LGD
Sbjct: 954 LMPSLVCYTELYLVAAELSRKVLAPL-RISNVS--MLVEAICAKSARTPENYERIEFLGD 1010
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LK + +L + EG L+ + V+N+ L + A L ++ Q Q
Sbjct: 1011 SILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVTQ-----QLV 1065
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVG-AF 1166
G + P + DL + + + L KT+ADVVEAL+G +F
Sbjct: 1066 TKGWQPPYM------------------SDLAKQDQEPESKRILSPKTLADVVEALIGVSF 1107
Query: 1167 IDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHR 1226
+D KA +I S+V +I + + D+ LE L+ + F +
Sbjct: 1108 VDGGLPKALECIRLFIPESQPRPFSEVRDILFGAAEPKGMKLPADLQLLEQLIEYSFCEK 1167
Query: 1227 GLLLQAFVHPSFNRLG--GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLV 1284
LL++A HPS+N G CY RLEF+GDA+LDY+I ++++ P L+ Q+ LR+ LV
Sbjct: 1168 ALLVEAVTHPSYNVSGTVACYDRLEFIGDAILDYIIVEEVFALEPALENWQMHLLRTALV 1227
Query: 1285 NNQAFANVAVDQSFYKFLIFD 1305
N + ++ S YK + F+
Sbjct: 1228 NADILGFLIMEWS-YKQMGFE 1247
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIF 1304
Y+R+EFLGD++L IT L + L G L+ ++ LV+N A D +FL+
Sbjct: 1002 YERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLCRAACDAELDQFLVT 1061
Query: 1305 DSNVLSETINNYVDYMITPSSTREVKEGPR--CPKVLGDLVESSLGAILLDSGF 1356
V T YM + + E R PK L D+VE+ +G +D G
Sbjct: 1062 QQLV---TKGWQPPYMSDLAKQDQEPESKRILSPKTLADVVEALIGVSFVDGGL 1112
>sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio GN=dicer1 PE=2 SV=2
Length = 1865
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 275/1084 (25%), Positives = 435/1084 (40%), Gaps = 172/1084 (15%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
RKYQ+EL + A+E N IV L TG GKT IAVLLI EL+H IR +FL + V
Sbjct: 35 RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGENGKRTVFLVNAASSVA 94
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMEL 179
QQA + +V + W +E+ + +VLVM I L+ L + + +
Sbjct: 95 QQASTVRTHSDLQVGDYMSEDMTSWPEEMWNREMIENQVLVMTCHIFLHVLKNGVLPLSK 154
Query: 180 IALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQANLPKS 239
I LL+FDECH A + HPY +IMK PRI G+TAS + GK +L +
Sbjct: 155 INLLVFDECHLA--ITGHPYREIMK--ICEGCPSCPRILGLTASILNGK--CDPCDLEEK 208
Query: 240 INSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIKREQ 299
I +LE +L + + D L+ + S P V G + + SE+L E
Sbjct: 209 IQNLEKILQSNAETATDLVVLDRYASQPREEVLDCGQYQDQSG-----LSERLLNELDEA 263
Query: 300 YISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELI 359
L H+ R+ T ++ + + L LG A A+ I++ + + I
Sbjct: 264 LNFLNDCNLSVHREDRDPTFISKQVLNDCRAVLTVLGPWCADKAAGIMVRELQ----KYI 319
Query: 360 EAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--- 416
+ E ++ F A+C + L LK F + K++RL+ IL
Sbjct: 320 KHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLD----LK--FVTPKVIRLLEILHEY 373
Query: 417 STFRLQQHMKCIVFVNR------------------------------------------I 434
F QQ + NR
Sbjct: 374 KPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKTEANFPSPFTNILCGIIF 433
Query: 435 VTARALSYILQNL--------KFLASWRCHFLVGVNAGLKSMSRN--------AMKSILE 478
V R + +L L LA +F+ G + G K+ RN + +L
Sbjct: 434 VERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIG-KNQPRNKQMEVEFRKQEEVLR 492
Query: 479 KFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDS 538
KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L DS
Sbjct: 493 KFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYIMLADS 552
Query: 539 GN----QRELDLIKNF--------SKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGAC 586
Q +L K SK + + E+ T D + + + G
Sbjct: 553 ERTKTFQEDLKTYKAIEKILRNKCSKSAECNDFELEPVTDDDNVL--PPYVLRSEDGGPR 610
Query: 587 ISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFD-DLGGTICHIILPANAPIH-QIVGTPQ 644
++ + ++RYC++LP D F + PK + + GG + LP N+P+ + G
Sbjct: 611 VTMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRSTLFLPINSPLRVPVTGPVM 670
Query: 645 SSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDSDSYEGEGS 699
+ A+K L E LHK+G L+D+L+P + D + G
Sbjct: 671 NCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTK 730
Query: 700 RGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PADRIYREFGL 746
R + +P LR + + P L M +PD P + R FG+
Sbjct: 731 RRQCSPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGI 790
Query: 747 FVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGI-MQAQQFQ------EMFLKVILDRS 798
+P H V + G ++ +L SG + A+Q + + IL
Sbjct: 791 LTAKPIP-RIPHFPV--YTRSGEVTISIELQKSGFSLSAEQLELITRLHQYIFSHILRLE 847
Query: 799 EFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV-FGTPGGS 853
+ EF P+ D + Y +LP+ ++S +D+K + S G P
Sbjct: 848 KPALEFKPVEAD--------SAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQ 899
Query: 854 VDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEKNGYSPYKD 908
+++ P L+ D +++++ ++ + FY V ++ + S +
Sbjct: 900 YTKQN-PFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDLTPLSKFPS 948
Query: 909 SDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED-------SESHELEE 961
+ + ++ + Y + L + QPLL NLL R L S + + +
Sbjct: 949 PEYETFAEYYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKA 1008
Query: 962 YFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPE 1015
++ L PELC + I S + LPSI++RL LL A EL+ +
Sbjct: 1009 KWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGV 1066
Query: 1016 GAEV 1019
GA+
Sbjct: 1067 GAQT 1070
Score = 150 bits (380), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV---EFEASQVTNICISSKSFLPLSAS 1209
K+IAD VEAL+G ++ G +AA FL +G++V E ++S + +P
Sbjct: 1533 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPPRCM 1592
Query: 1210 LDMATLEILLGH--------------QFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGD 1253
+ E L H F ++ LLQAF H S+ N + CYQRLEFLGD
Sbjct: 1593 FEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGD 1652
Query: 1254 AVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETI 1313
A+LDYLIT +LY + PG LTDLRS LVNN FA++AV ++K+ S L I
Sbjct: 1653 AILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVI 1712
Query: 1314 NNYVDYMITPSSTREVKEGPR-------------CPKVLGDLVESSLGAILLDSGFNLNT 1360
+++V + + + + + R PK +GD+ ES GAI +DSG +L T
Sbjct: 1713 DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLET 1772
Query: 1361 VWKIMLSFLDPIL-KFS-NLQLNPIRELLEL 1389
VW++ + P++ KFS N+ +P+RELLE+
Sbjct: 1773 VWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1803
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1278 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1337
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1338 LYRLGKKKGLPSRMVVSIFDP 1358
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1277 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1335
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1645 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1702
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH-----KKT 1154
P F + + + Q + +++E+R S+ K
Sbjct: 1703 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1750
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1751 MGDIFESLAGAIYMDSGMSLETVW 1774
>sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=dcl2-1 PE=3 SV=2
Length = 1387
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 193/684 (28%), Positives = 316/684 (46%), Gaps = 103/684 (15%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P R YQ+E+ + +++ENIIV +GTG GKTHIA+L I + L P K I FL PT
Sbjct: 15 PAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALLRI--IKELESNPHKLIW-FLTPT 71
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLY 171
VAL QQ K + ++I + RT K W+ + + +V+V +L +
Sbjct: 72 VALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAVLADAMS 131
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVV 226
H F+K+ + L+IFDE HH + HP KIM+DFY P + + VP+I G+TASPVV
Sbjct: 132 HGFVKITQLGLMIFDEAHHCMRR--HPANKIMQDFYHPALERHGAEAVPKILGLTASPVV 189
Query: 227 GKGASAQANLPKSINSLENLLDA--KVYSVEDAEDLESFVSSPVVRVYQYGPVIND---- 280
+ + +E+ LDA K +E L + P ++ + PV+ D
Sbjct: 190 RSNR-------QELLKIESNLDAVCKTPRTHRSE-LMTHTHRPHLQQILFTPVLLDDLQV 241
Query: 281 ---TSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNT--------TKQLNRLHDSMK 329
T + V+ L ++ + YI L + D ++L+ QL R
Sbjct: 242 GSKTLKALVSAWTSL-RLEDDPYIKKLRKSPLDGRALQKVLESGKTYCNDQLKRFATRSL 300
Query: 330 FCLENLGVCGA---LHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICR 386
E LG A +HAS E ++A D++ + + + + +
Sbjct: 301 HIFEELGEWAADYFIHASI-----------EQLKARAGNSADTMGWTDEEKAYLLDIVSK 349
Query: 387 RDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQN 446
DL+ + + P S K L+ L T + + + ++F + T + +L
Sbjct: 350 LPIPNIDLTHSDPDRIPI-SSKFRSLLEFLDT-KGEPNFSGLIFAKQRATVSVMEKLLSI 407
Query: 447 LKFLA-SWRCHFLVGVNAGLKS------MSRNAMKSILEKFRSGELNLLVATKVGEEGLD 499
+RC VG + G + + L +FR+G+ NL++AT V EEG+D
Sbjct: 408 HPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGID 467
Query: 500 IQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNF 550
I C +V+ FD P + SF+Q RGRAR QS YA + + ++ E +I+ +
Sbjct: 468 ISACSVVVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDESSALSKWEDLEQAMIEAY 527
Query: 551 SKEEDRM---------NREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCS 601
+E R+ N E+++R +V S+GA ++A V+ L+ +C+
Sbjct: 528 EDDERRLREAWALEAINEEVVER-------------LEVQSTGAVLTADTAVAHLNHFCA 574
Query: 602 KLPHDEFFNPKPKFYYFDD----LGGTICHIILPA--NAPIHQIVGTPQSSME-AAKKDA 654
LP + + +P+F Y D L GT+ LP+ + + +I G E AA+K+A
Sbjct: 575 VLPRQPYASNEPEFSYEKDDADLLRGTVT---LPSCVHPGVRRIQGQRWWQTERAARKEA 631
Query: 655 CLKAIEDLHKLGALNDYLLPQEDN 678
+A + L++ G L+D+LLP + N
Sbjct: 632 AFQAYKRLYEFGLLSDHLLPFKRN 655
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 189/461 (40%), Gaps = 79/461 (17%)
Query: 943 RNLLHNRKLE----DSESHELEEYFDDLPPELCQLKIIGFSKDI-GSSLSLLPSIMHRLE 997
RNLLH + L DSE+ + + E C + + +++ I G +S+ I+ RLE
Sbjct: 854 RNLLHRQTLAAKQPDSETPAISSKIRLILAENCTIDKLPYAETIFGRFISV---ILDRLE 910
Query: 998 NLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRH 1057
LVA L + S ++ A+T Q + +R E GD+ LK+ V
Sbjct: 911 ATLVATRLCETILRDLEFS---SIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQ 967
Query: 1058 LFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRIC 1117
LF H EG L+ R V NS L + A L +I ++ F P ++ A P I
Sbjct: 968 LFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSA-----PLIS 1022
Query: 1118 SKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATA 1177
K + + + K +ADVVEAL+GA D GF AA A
Sbjct: 1023 EK---------------------ISLTPKQRTMSTKVLADVVEALIGASYIDGGFAAAHA 1061
Query: 1178 FLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPS 1237
+ +V E T + + +L+ L +G+ F ++ LL+++ HPS
Sbjct: 1062 CIHRFLPEVNLENIDRTTAPMPKDGV--TNHTLNDDHLMAHIGYTFTNKSLLVESLTHPS 1119
Query: 1238 --FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFA----- 1290
F+ YQRLEFLGDAVLD I S L S ++ G +T ++ +VN A
Sbjct: 1120 CQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCME 1179
Query: 1291 --------NVAVDQS-------------FYKFLIFDSNVLSETINNYVDYM--ITPSSTR 1327
NV V + ++F+ + L + + + S
Sbjct: 1180 FALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIH 1239
Query: 1328 EVKEGPRCP----------KVLGDLVESSLGAILLDSGFNL 1358
+K P P K D++ES LGAI +DS NL
Sbjct: 1240 GLKHSPSYPWKSLSQLNADKFFSDIIESILGAIFIDSHGNL 1280
>sp|A4RKC3|DCL1_MAGO7 Dicer-like protein 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL1 PE=3 SV=2
Length = 1591
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 189/653 (28%), Positives = 299/653 (45%), Gaps = 82/653 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLI-----YELAHLIRKPQKSICIFLAPT 114
R+YQ+EL ++A ++N I L TG GKT IA+LLI EL + +K I FL
Sbjct: 109 REYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHIIELELGARWQGREKRITFFLVDK 168
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKR--LKSHCDWEKEIDQYEVLVMIPQILLYCLYH 172
VALV+QQ I ++ F V G + R S +EK + + EV+V +IL CL+
Sbjct: 169 VALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYRCLHR 228
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY--KPDIMKVPRIFGMTASPVVGKGA 230
++ + ++L++FDE HHA K NH YA+I+KDFY + D K PRIFGMTASP+ K
Sbjct: 229 SYLNISQVSLVVFDEAHHA--KKNHVYARIIKDFYLMEEDCQKRPRIFGMTASPIDTKDT 286
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ ++ + LE+LL +++ ++ D + L+ S P Y V+ ++
Sbjct: 287 C--ISYERATHELESLLHSEIATISDRDLLKVIGSRPQEVRKSYARVLRQENTELCN--- 341
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
QL E+ + +H + T DS +F + LG A +
Sbjct: 342 QLREL------------VGNHPLFKQT-------FDSAEFAVTELGAWCADKLWELCF-- 380
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVL-----KEPFF 405
R E + ++ S R + E + LS ++ ++
Sbjct: 381 ----REEAVSTLDGRVEGSRARDPDEVGESSHEV---SNAREALSLVQQWSFSPPEDGSL 433
Query: 406 SKKLLRLIGILSTFRLQ----QHMKCIVFVNRIVTARALSYILQNLKF---LASWRCHFL 458
S K +LI IL+ Q ++CIVFV R TA L+ + + + + + FL
Sbjct: 434 STKTHKLIEILAECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFL 493
Query: 459 VGVNAGLKS--MSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
+G G + + + + +FR GE+N L AT + EEGLDI C +VIRFDL T
Sbjct: 494 IGAGRGGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTI 553
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNRE-------------IMD 563
+IQSRGRARM S + + + GN N +DR+N + IM+
Sbjct: 554 QYIQSRGRARMRNSWFIHMTEFGNPEH-----NRRWFQDRVNEQKMRDFCLSLPKDRIME 608
Query: 564 RTSSDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKLPH--DEFFNPKPKFYYFD 619
+ D + ++I+ V S A ++ + +L + + LP DE + +
Sbjct: 609 KAEVDDVLRGDQSQKIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILS--VDYTVVP 666
Query: 620 DLGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
GG + LPA++P+ +G S + AK A L+ L+D+L
Sbjct: 667 VFGGFQGEVYLPASSPLRSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 226/523 (43%), Gaps = 111/523 (21%)
Query: 915 VDHLISSYGI---------HLKHPKQPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDD 965
V+H I +Y + H QP++ A+ RNLL E+S
Sbjct: 947 VEHTILNYSVSLWKKSRAGHNSRQDQPVVEAELAPLRRNLLDETDGENSTG--------- 997
Query: 966 LPPELC-----QLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVS 1020
P+ C L I D P+I++RLEN L+++E L G ++
Sbjct: 998 --PQTCYLVLETLLISQIPVDTVVMAYTFPAIIYRLENSLISLEACQNL------GLDIP 1049
Query: 1021 AEMLLKALTTEKCQER--------------FSLERLEILGDAFLKYAVGRHLFLLHDTVD 1066
++ L A+T + + ERLE LGD FLK A L+ L + D
Sbjct: 1050 IDIALIAMTKDSDNSDDHDEAPINFQSGMGQNYERLEFLGDCFLKMATSIALYTLVEG-D 1108
Query: 1067 EGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIH 1126
E E R + N NLL A +NLQ +IR + F+ ++ G + + K+TE
Sbjct: 1109 EFEYHVERMLDICNKNLLNWALESNLQEHIRSKSFNRRTWYPPGLKL--LKGKKTE---- 1162
Query: 1127 SQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAF---LKWIG 1183
DD H L K+IADV EAL+GA + +++ F +K +
Sbjct: 1163 -------VDD----------EHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVT 1205
Query: 1184 IQVEFEASQV--------TNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFV 1234
+ + + + C S P L++ + ++ +G++F + LL AF+
Sbjct: 1206 VMTHSKTHTMQAWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFM 1265
Query: 1235 HPSFNRLG---GCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFAN 1291
HPS+ R YQRLEFLGD++LD + YL+ +P P LT+ + +V+NQ F
Sbjct: 1266 HPSYPRQYENIPSYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGC 1325
Query: 1292 VAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTRE------VKEGPR----------- 1334
VAV F++ LI L +I + + + + RE V+ G R
Sbjct: 1326 VAVGLGFHRHLIHMQPALGGSITEWAELV---TKKREEARQLAVRRGQREEDYARDFWIE 1382
Query: 1335 ---CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILK 1374
PK L D++E+ +GA+ +D+G++ + V + F D +K
Sbjct: 1383 VHHPPKCLPDILEAYVGALFVDTGYDYSAV----VGFFDRHIK 1421
>sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl2 PE=3 SV=1
Length = 1377
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 307/669 (45%), Gaps = 84/669 (12%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRK--PQKSICIFLAPTVAL 117
R+YQ E+ + +++ENIIV + TG GKT IA+L I AH + P+K + FL PTVAL
Sbjct: 17 RQYQYEMFEASLKENIIVAMDTGTGKTQIALLRI---AHQLEGGGPRK-LTWFLTPTVAL 72
Query: 118 VQQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
QQ +VI + + T G K R KS W++ + +V+V +L L H F
Sbjct: 73 CLQQYEVIRSHLPAVRACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALTHGF 132
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKG 229
+++ + LLIFDE HH + HP IM DFY P + K VP I G+TASPVV
Sbjct: 133 VRISQLGLLIFDEAHHCMRR--HPANMIMLDFYHPTLRKHGRDSVPCILGLTASPVVRSK 190
Query: 230 ASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSP-----VVRVYQYGP---VINDT 281
+ L +++S+ K V E L ++ P + + GP +
Sbjct: 191 SQEMKTLESNLDSI-----CKTPQVHKQE-LTTYAHRPELLPIICKAIDEGPGGRALQAL 244
Query: 282 SSSYVTCSEQLAEIKREQYISALS-----RKLHDHQSLRNTTKQLNRLHDSMKFCLENLG 336
++ T Q S L+ + L ++L N +Q+ R D + LG
Sbjct: 245 EHAWDTADIDGDPDAIPQNGSLLNGSGEYKALMVRKTLCN--EQIKRFVDRSRHIFAELG 302
Query: 337 VCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSC 396
A Y + + E +R + D SL + + S L
Sbjct: 303 EWAA---DYYICTSVEQLRTTIR-------DQSLTMDWEDEERAYLS-----NFLSKLPV 347
Query: 397 IEV---LKEP---FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQ-NLKF 449
EV L +P S KL LI L F ++FV + VT L+ +L + +
Sbjct: 348 AEVQANLADPNNFTMSPKLAALINFLDKFD-DPEFSGLIFVKQRVTVSVLARLLSLHPQT 406
Query: 450 LASWRCHFLVGVNAG-----LKSMSRNAMK--SILEKFRSGELNLLVATKVGEEGLDIQT 502
+RC VG++ G + NA K ++ FRSG NL+V T V EEG+D+
Sbjct: 407 RDRFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVTTSVLEEGIDVTA 466
Query: 503 CCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQR---------ELDLIKNFSKE 553
C +V+ FD P + SFIQ RGRAR +S YA + + ++ E +++ + E
Sbjct: 467 CRVVVCFDKPANLKSFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQILEQAMVEAYQDE 526
Query: 554 EDRMNREIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKP 613
E R + + + +A + + V+++GA I+ V+ L+ +C+ LP + + + +P
Sbjct: 527 E----RRLREAEAQEAVDENVPEMITVEATGAVITPDSVVTHLYHFCAVLPEERYVDNRP 582
Query: 614 KFYYFDDLGGTI-CHIILPA--NAPIHQIVGT-PQSSMEAAKKDACLKAIEDLHKLGALN 669
+F + D G I +ILP+ + + +I G S AA K+ +A L++ G LN
Sbjct: 583 EFSFEKDRQGLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVKETAFQAYRALYEFGLLN 642
Query: 670 DYLLPQEDN 678
D+LLP N
Sbjct: 643 DHLLPLTKN 651
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 192/472 (40%), Gaps = 78/472 (16%)
Query: 934 LRAKPLFRLRNLLHNRKLEDSESHELEEY------FDDLPPELCQLKIIGFSKDIGSSLS 987
+ +P+ R RN LH L++ ++ + E + E C + + S I
Sbjct: 840 IECRPIPRRRNFLHPPALDNGQADAIVESEHGSAKVHMVAAESCTVDKLPVSTAIFGLF- 898
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEILGD 1047
+P I+ RLE+ L+A L + + + ++ A+ Q + +R E LGD
Sbjct: 899 -IPHIVDRLESTLIA---NRLCATILCDVGFADIQHVITAIMAPSAQGVTNYQRYEFLGD 954
Query: 1048 AFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQFF 1107
+ LKY V LF + EG LT R+ V N L + A L +I + P ++
Sbjct: 955 SILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLDSFIITKALTPRRWI 1014
Query: 1108 ALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI 1167
A P I ++ + Q + K +ADV+EAL+GA
Sbjct: 1015 A-----PLISTRVGAAPVKRQ---------------------MSAKVLADVIEALIGAAY 1048
Query: 1168 DDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRG 1227
D G A +V + + ++ ++ +D L+ LG+ F +
Sbjct: 1049 LDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTEHGRTARHIID-GDLQRHLGYTFKNED 1107
Query: 1228 LLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVN 1285
LL++A HPS ++ YQRLEFLGDA+LD +I ++ K+ PG +T ++ +VN
Sbjct: 1108 LLIEALTHPSCQHDQTTQSYQRLEFLGDAILDMVIVPIIFQYSNKISPGDMTLIKHAVVN 1167
Query: 1286 NQAFA----NVAVDQS----------------------FYKFLIFDSNVLSETINNYVD- 1318
+++Q ++F+ F+S L + + +D
Sbjct: 1168 ANLLGFFCMEFSIEQDKTKVEKTPDGRFAVKSETQHVELWRFMRFNSLDLQTSRDAALDR 1227
Query: 1319 -YMITPSSTREVKEGPRCP----------KVLGDLVESSLGAILLDSGFNLN 1359
+ + GP P K D+VES LGAI +DSG +L+
Sbjct: 1228 HRRLRNKILTSLYHGPSYPWQSLSQLYADKFFSDIVESVLGAIYVDSGGDLS 1279
>sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=dcl2 PE=3 SV=1
Length = 1429
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 184/648 (28%), Positives = 290/648 (44%), Gaps = 79/648 (12%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + +++ NIIV +GTG GKT IA+L I H + + FLAPTV L
Sbjct: 14 ARSYQLEMFEASLKGNIIVVMGTGSGKTQIALLRII---HELENSDGKLIWFLAPTVPLC 70
Query: 119 QQQAKVIEESI-GFKVRTFCGGSK--RLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ +VI + I K RT G K W+ ++ +V+V P +L + H F+
Sbjct: 71 LQQHRVISQHIPAVKSRTLLGSDKVELWTEQAVWDAVLEGLQVIVSTPAVLHDAMTHGFV 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK-----VPRIFGMTASPVVGKGA 230
++ + LLIFDE HH K HP IM++FY P + + VPRI G+TAS G
Sbjct: 131 RISRLGLLIFDEAHHCIRK--HPTNMIMRNFYHPALQEYGPGAVPRILGLTAS--AGSSR 186
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSE 290
+ ++NS+ A ++L + P +R Y P++ + +S + +
Sbjct: 187 EGLQTIEMNLNSVCTTPQAH------RQELLEYTHMPELRRVLYTPLMKENASLWEGSTL 240
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSG 350
Q + Y S Q+ + LG+ A + +I S
Sbjct: 241 QKLLERDNTYCSG----------------QMKTFVCKAVHIFQELGIWAAEY--FIRASV 282
Query: 351 DETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIAS-DLSCIEVLKEPFFSKKL 409
+E + + + ++ + D E I + + D+ + P S K
Sbjct: 283 EELLSHAYVHSKIDLDYDE--------REYLVNILSKSPVPDIDVHSTDPKDFP-VSPKF 333
Query: 410 LRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFLVGVNAGL-KSM 468
LI L + + ++FV + +SY+L S R F G G+ S
Sbjct: 334 EALISFLMSTE-DINFSGLIFVEQRAAVTVMSYLLST---HPSTRDRFRTGSFIGMSNST 389
Query: 469 SRNAM----------KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
+R M L+ FR G NL+VAT V +EG+D+ C +VI +++P+ SF
Sbjct: 390 NRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESF 449
Query: 519 IQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNFSK-------EEDRMNREIMDRTSSDAF 570
IQ RGRAR S Y+ ++ + + LD + F K E+ R E+ S D
Sbjct: 450 IQRRGRARRQNSTYSMMLSTEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGSLDED 509
Query: 571 TCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHII 629
C+ + V S+GA ++A Y + L +C LP + KP+F + + GG + +I
Sbjct: 510 VCTR---FCVRSTGAILTAEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGGLLRAKVI 566
Query: 630 LPA--NAPIHQIVGTPQSSME-AAKKDACLKAIEDLHKLGALNDYLLP 674
LP+ N + + G E AAKK+A A + L++ G +ND LLP
Sbjct: 567 LPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLP 614
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 172/433 (39%), Gaps = 101/433 (23%)
Query: 988 LLPSIMHRLENLLVAIEL--KHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEIL 1045
+P I+ RLE LVA L L F + V + A+T Q +R E
Sbjct: 860 FIPVILDRLEAALVATRLCETVLRDIQFQDLRHV-----ITAITMPLAQAPTDYQRYEFF 914
Query: 1046 GDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQ 1105
GD+ LK+ V LF + EG LT V N+ L + A L YI F P +
Sbjct: 915 GDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRK 974
Query: 1106 FFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGA 1165
+ A P I K + S + K +ADVVEAL+GA
Sbjct: 975 WSA-----PLISEK---------------------LYASASTRSMSAKVLADVVEALIGA 1008
Query: 1166 FIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKSFLPLSAS------LDMATLEILL 1219
D G A + + ++E ++ + +P+S + LE +
Sbjct: 1009 AYIDGGLHKAQSCIVRFLPEIELPETK-----LPRPESMPMSKDHKKPHLIQQENLENHI 1063
Query: 1220 GHQFLHRGLLLQAFVHPS--FNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LL++A HPS ++ YQRLEFLGDAVLD LI + + + + + G++T
Sbjct: 1064 GYTFKDKTLLMEALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMT 1123
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLI-------FDSNVLSET-----------INNYVDY 1319
++ +VN A + + +K+ + D+ +ET + +Y+ Y
Sbjct: 1124 KIKHAIVNGHLLAFLCMQ---FKWAMPSPLTPSIDTGTETETEIISPPPKTLSLYSYLRY 1180
Query: 1320 --------MITP---SSTREVKEGPRCPKVL-----------------------GDLVES 1345
+ P SS + CP +L D+VES
Sbjct: 1181 SPSRPLPLHVEPESGSSNALTRHNLLCPSILHALNNTTAYPWSLFSAIHADKFFSDVVES 1240
Query: 1346 SLGAILLDSGFNL 1358
+GAI +DSG +L
Sbjct: 1241 IIGAIFVDSGGDL 1253
>sp|Q2H0G2|DCL1_CHAGB Dicer-like protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DCL1 PE=3
SV=2
Length = 1607
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 290/647 (44%), Gaps = 67/647 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY-----ELAHLIRKPQKSICIFLAPT 114
R YQLEL ++A +N I L TG GKT IA LL+ EL ++ K I FL
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195
Query: 115 VALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRF 174
VALV QQ V+ ++ + + FCG + W K D+ +V +IL CL H +
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDVTQDFWHKTFDENMAIVCTAEILYQCLTHSY 255
Query: 175 IKMELIALLIFDECHHAQVKSNHPYAKIMKDFYK--PDIMKVPRIF-GMTASPVVGKGAS 231
I+M+ + LL+FDE HH K NHPYA+I+KDFY D+ K RI MTASPV +
Sbjct: 256 IRMDQVNLLVFDEAHH--TKKNHPYARIIKDFYAEVKDLNKRLRISRAMTASPVDAQIDP 313
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQ 291
A P+ LE LL +++ +V D L + SS ++ + + Y C
Sbjct: 314 KIARSPE----LEGLLHSQIATVADPTALHN--SSTKLK--------REVTVEYGKC--- 356
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGD 351
L E + + L+R L D L + + LG A + G+
Sbjct: 357 LPEFE-----TGLNRALKD---LVGEHRLFQKPFAFTATAASELGPWCADRYWQLFFRGE 408
Query: 352 ETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEVLKEP---FFSKK 408
E+++ E T + L + S S+ AA + A L P S K
Sbjct: 409 -----EVVKLEAKTEREILRK--SAYSQEIAAQVNKVREAHRLVGQHEFASPSSDLLSSK 461
Query: 409 LLRLIGIL-STFRLQQH-MKCIVFVNRIVTARALSYILQNLKF-LASWRCHFLVGVNA-- 463
++ L+ IL FR H +CIVFV + A L+ +LQ + + LVG
Sbjct: 462 VVILLRILRGEFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGLEPGILVGGGRPE 521
Query: 464 ----GLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFI 519
K R+ + +I+ KF+ GELN + AT V EEGLDI C ++IR+DL T+ +I
Sbjct: 522 ASYDNAKVTYRDQVLTII-KFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYI 580
Query: 520 QSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCS------ 573
QSRGRAR S Y +V+S N+ + + + ED + + + T +
Sbjct: 581 QSRGRARQEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEALPADRKLTGNNFDMEY 640
Query: 574 ------EERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICH 627
++R Y V +GA ++ + L + + LPH N + GG C
Sbjct: 641 FLRKEKDQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTAGYLVLSVPGGYQCE 700
Query: 628 IILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLP 674
+ LP ++PI G +S AK A + L K L+ +L P
Sbjct: 701 VTLPESSPIRSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLRP 747
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 215/513 (41%), Gaps = 105/513 (20%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELC-----QLKIIGFSKDIGSS 985
QP++ A+ L RNLL + +D DL P+ C L+I D+ +
Sbjct: 1000 QPVVEAEVLPIRRNLLDDHIGDD-----------DLEPKPCFIVLEPLRISPLPVDLVAM 1048
Query: 986 LSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTT------EKCQERFSL 1039
P+IMHR+++ LVA+E +L+ + V ++ L+A T E E+ S
Sbjct: 1049 AYNFPAIMHRIDSNLVALEACKMLNLN------VRPDLALEAFTKDSDNSGEHDAEQISF 1102
Query: 1040 --------ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNN 1091
ERLE LGD FLK A +F L E E R + N NL A
Sbjct: 1103 QSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALEVK 1162
Query: 1092 LQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLH 1151
L+ +IR FD ++ G + K+ R H L
Sbjct: 1163 LEEHIRSMAFDRRSWYPEGLTLKKGKRKDLTR-----------------------QHVLA 1199
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAF---LKWIGIQVEFEASQVTNICISSKSFLPL-- 1206
KTIADV EAL+GA + + F ++ + + V+ + +T+ ++ P
Sbjct: 1200 DKTIADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAW 1259
Query: 1207 ------SASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFLGDAVL 1256
S LDMA E +G+ F H LL AF HP++ + YQRLEFLGDA+L
Sbjct: 1260 QTAPCNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALL 1319
Query: 1257 DYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY 1316
D +L+ +P P LT+ + +V+NQ +AV F++ + + ++ + + I Y
Sbjct: 1320 DMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFHRAISYCASAIQKEITEY 1379
Query: 1317 V------------DYMITPSSTREVKEGP--------------RC---PKVLGDLVESSL 1347
V D TP + P RC PK L D+VE+ +
Sbjct: 1380 VTEIEDALQSARDDASKTPCNRHATTPSPGDLPAESFARDFWVRCSRPPKCLPDVVEAYV 1439
Query: 1348 GAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
GA+ +DS ++ V + P F +++L
Sbjct: 1440 GAVFVDSRYDFARVRAFFADHVRPF--FEDMRL 1470
>sp|Q0CW42|DCL1_ASPTN Dicer-like protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl1 PE=3 SV=2
Length = 1519
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 186/646 (28%), Positives = 293/646 (45%), Gaps = 74/646 (11%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYEL--AHLIRKPQKS---ICIFLAPT 114
R+YQ+EL ++A +N I L TG GKT IAVLL+ + LI + + I FL +
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169
Query: 115 VALVQQQAKVIEESIGFKVRTFCGG-SKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
V LV QQA V+ ++ V F G L + W + ++ V+V +IL CL +
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229
Query: 174 FIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-KPDIMKVPRIFGMTASPVVGKGASA 232
+I M+ I LL+FDE HH K +HPYA+I++D Y + PRIFGMTASPV KG
Sbjct: 230 YITMQQINLLVFDEAHH--TKKDHPYARIIRDSYLRVPPSSRPRIFGMTASPVDTKGDVL 287
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIND-TSSSYVTCSEQ 291
+A +LE LLD+K+ + L V+ P V+ Y + TS Y +
Sbjct: 288 EA-----ARNLEALLDSKIATTSKLTILRQVVNRPNEEVWIYDKLQPTFTSDLYKLMESR 342
Query: 292 LAEIKREQYISALSRKLHDHQSLRNTTKQLNR-----LHDSMKFCLENLGVCGALHASYI 346
+I + + +R H + T +R L D + +E + G ++ +
Sbjct: 343 FGDISHLEPMFRFAR----HATSELGTWCADRVWVSALADDVLPKVEG-SIGGKRQSTGL 397
Query: 347 LLSGDETMRN--------ELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
+ R+ EL+E+ + +S+ ++ I + G ++ CI
Sbjct: 398 GQLPKDVHRDITRIKEASELVESHPPNDPGAPEALSSKVRVLWKEISQCFGQETNTKCIV 457
Query: 399 VLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLASWRCHFL 458
++ + +K L L +L+ L+ + ++ R+ I N+ F R L
Sbjct: 458 FTEKRYTAKVLFDLFTVLNVPGLRPGV--------LIGVRSSDRIGMNVTF----RQQIL 505
Query: 459 VGVNAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASF 518
V +FR+GE+N L AT V EEGLDI C LV+RFDL +T+ +
Sbjct: 506 TMV-----------------RFRTGEINCLFATAVAEEGLDIPDCNLVVRFDLYKTLIQY 548
Query: 519 IQSRGRARMPQSEYAFLVDSGN-QRELDLIKNFSKE-----------EDRMNREIMDRTS 566
+QSRGRAR S YA +++ N E L++ E EDR+ D T
Sbjct: 549 VQSRGRARHADSTYASMIEKDNADHESILVQVNDAEKIMQSFCQLLPEDRILHGNDDDTD 608
Query: 567 SDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTIC 626
+ E Y + S+ A ++ +++L RY S L ++ + + + +C
Sbjct: 609 AVLDREEWEEPYTLPSTAARLTHHSAITVLARYASSLQYENDTSAQVTYVVLPVNDAYVC 668
Query: 627 HIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
+ILP +PI G P AK+ A +A L K L++YL
Sbjct: 669 EVILPEKSPIRGATGMPAMKKSTAKRYAAFEACRLLRKHRLLDEYL 714
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 202/469 (43%), Gaps = 74/469 (15%)
Query: 931 QPLLRAKPLFRLRNLLHNRKLEDSESHELEEYFDDLPPELCQLKIIGFSKDIGSSLSLLP 990
QP+L A+ L RLR L +R + E P LKI I ++ P
Sbjct: 961 QPVLHAE-LVRLRRNLLDRMTDKERKLETRSVICIEP-----LKISAIPAAIAATCLAFP 1014
Query: 991 SIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALT--TEKCQERFS---------- 1038
+I+ RL+ L+ +E L G E+S E L+ALT ++ E S
Sbjct: 1015 AIISRLDAYLIGLEACKKL------GLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMG 1068
Query: 1039 --LERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYI 1096
ERLE LGD FLK A LF H +E + R + N NL A + L +I
Sbjct: 1069 KNYERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFI 1128
Query: 1097 RDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIA 1156
R + F ++ G + HS+ G S+ H L +KTIA
Sbjct: 1129 RSRGFSRDTWYPEGLTL-------LQGRDHSKKIG------------SESKHALAEKTIA 1169
Query: 1157 DVVEALVGAFI--------DDSGFKAATAFLKWIGIQVEFEASQVTNICISS----KSFL 1204
DV EAL+GA + D G +A +A + AS I + S +
Sbjct: 1170 DVCEALIGAALLTPGPQHRFDMGVRAVSAV---VDSNEHNAASWRDYISLYSIPKYQEQA 1226
Query: 1205 PLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPSFNRLGG---CYQRLEFLGDAVLDYLI 1260
P + +D+ +E LG+ F + LL AF HPS+ CYQ LEFLGDA+LD +
Sbjct: 1227 PDGSEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDALLDMVC 1286
Query: 1261 TSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYM 1320
L+ +P P LT+ + +V+N+ +AV + L + S+ L I +Y +
Sbjct: 1287 VEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITHYAEEA 1346
Query: 1321 ITPSSTREV-------KEGPRCPKV-LGDLVESSLGAILLDSGFNLNTV 1361
+S +V + P PKV L D+VE+ LGA+ +DS F V
Sbjct: 1347 QAAASQSDVAVDYWTLTQDP--PKVCLPDMVEAYLGAVFVDSNFRFEEV 1393
>sp|Q9VCU9|DCR1_DROME Endoribonuclease Dcr-1 OS=Drosophila melanogaster GN=Dcr-1 PE=1 SV=1
Length = 2249
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 245/537 (45%), Gaps = 112/537 (20%)
Query: 1020 SAEMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVN 1079
S ++L+ALT + +LERLE +GD+FLKYA+ +L++ ++ V EG+L+ RS V
Sbjct: 1722 SPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Query: 1080 NSNLLKLAARNNLQVYI---RDQPFD----PCQFFA-------LGRRCP----------- 1114
N NL +L R L Y+ + +P D PC + + + P
Sbjct: 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLD 1841
Query: 1115 -------RICS--KETERTIHSQYDGRAP----DDLNAEVRCSK----------GHHWLH 1151
+IC +E + + +G A DD N C+ H +
Sbjct: 1842 IKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDS--CNDFSCFIPYNLVSQHSIP 1899
Query: 1152 KKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV--------------EFEASQVTN-- 1195
K+IAD VEAL+GA++ + G + A F+ W+G++V S N
Sbjct: 1900 DKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAE 1959
Query: 1196 --ICISSKSFLPLSASLDMAT---------------LEILLGHQFLHRGLLLQAFVHPSF 1238
+ + P S L A E LG++F R LLQA H S+
Sbjct: 1960 NVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASY 2019
Query: 1239 --NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQ 1296
NRL CYQRLEFLGDAVLDYLIT +LY + PG LTDLRS LVNN FA++AV
Sbjct: 2020 TPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRH 2079
Query: 1297 SFYKFLIFDSNVLSETINNYV------------DYMITPSSTREVKEGPRCPKVLGDLVE 1344
F+KF S L++ I+ +V +Y + + E PK LGD+ E
Sbjct: 2080 GFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFE 2139
Query: 1345 SSLGAILLDSGFNLNTVWKIMLSFLDP-ILKFSN-LQLNPIRELLELCNSYDLDLQFPSL 1402
S GAI LDS +L+ VW + + + P I +FSN + +PIRELLEL P
Sbjct: 2140 SIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLEL---------EPET 2190
Query: 1403 KKGGK--FLAEAKVTGKDKDVFISACATNLSRKEAIR--IASQQLFSKLKAAGYVPK 1455
K GK LA+ + DVF + R I A++ +LK G + K
Sbjct: 2191 AKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAK 2247
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 428 IVFVNRIVTARALSYILQ-------NLKFLASWRCHFLVGVNAGLKSMSRNA------MK 474
+++ N+ TAR L +L +LKFL RC + A + + A +
Sbjct: 496 LIYCNQNHTARVLFELLAEISRRDPDLKFL---RCQYTTDRVADPTTEPKEAELEHRRQE 552
Query: 475 SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAF 534
+L++FR + N+L+ T V EEG+D+ C LV+R+D P T S++Q +GRAR + +
Sbjct: 553 EVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVI 612
Query: 535 LV 536
LV
Sbjct: 613 LV 614
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 190/494 (38%), Gaps = 80/494 (16%)
Query: 583 SGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICH--IILPANAPI-H 637
+GA + G ++L+++YC++LP D F + + G T+ + LP N+P+ H
Sbjct: 816 TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLKH 875
Query: 638 QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNA--------------TEDE 683
IVG P + A++ A L+A +LH++G L+D L P EDE
Sbjct: 876 DIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDE 935
Query: 684 PMLFSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF-----IPD--- 735
++ SD + G R + + + + + P L YF+Q IP+
Sbjct: 936 QIVQLSD-EPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYL--YFIQLTLQCPIPEEQN 992
Query: 736 -------PADRIYREFGLFVKSLLP--------GEAEHLKVDLHLARGRSVMTKLVPSGI 780
P + + FG+ +P + +KV L LA+ R ++T I
Sbjct: 993 TRGRKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTS---EQI 1049
Query: 781 MQAQQFQEMFLKVILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHK---NSVDWKI 837
+ F +L +F F P S+ ++P + +DW+
Sbjct: 1050 VCINGFLNYTFTNVLRLQKFLMLFDP--------DSTENCVFIVPTVKAPAGGKHIDWQF 1101
Query: 838 IRRCLSSPVFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKWFYLVTNIV 897
+ + G ++ R Q + + V + ++ V I
Sbjct: 1102 LE------LIQANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQYFYVAEIC 1155
Query: 898 FEKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLH----NRK--- 950
+ S + + + + + YG+ +++ QPLL N L NRK
Sbjct: 1156 PHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1215
Query: 951 ----LEDSESHELE--EYFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIE 1004
E+++ + E E L PELC + F + + LP I++R+ LL+A +
Sbjct: 1216 LPTSSEETKRAKRENLEQKQILVPELC--TVHPFPASLWRTAVCLPCILYRINGLLLADD 1273
Query: 1005 LKHLLSASFPEGAE 1018
++ +SA G +
Sbjct: 1274 IRKQVSADLGLGRQ 1287
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 24/226 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R +Q+EL A E N I+ LG K IA+ L+ EL+ R+ + ++L+ V
Sbjct: 18 RDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRARR-HGRVSVYLSCEVGTST 76
Query: 120 QQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQ----YEVLVMIPQILLYCLYHRFI 175
+ + + + T + + D + D Y V ++ P+ LY L R +
Sbjct: 77 EPCSI------YTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETREL 130
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV-----PRIFGMTASPVVGKGA 230
+ + L++ ++CH + V Y +I + ++ IM PRI G+ A P+ G
Sbjct: 131 LLSSVELIVLEDCHDSAV-----YQRI-RPLFENHIMPAPPADRPRILGL-AGPLHSAGC 183
Query: 231 SAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGP 276
Q L + +LE + ++ + D + + S P + Q P
Sbjct: 184 ELQ-QLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQCAP 228
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 1185 QVEFEASQVTNICISSKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGC 1244
++E E T S+ LP S D L+GH ++LQA + N G
Sbjct: 1686 RIEIEPPTSTKAITSA--ILPAGFSFDRQP--DLVGHPGPSPSIILQALTMSNAND-GIN 1740
Query: 1245 YQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLI 1303
+RLE +GD+ L Y IT+YLY Y + G+L+ LRS V N + + +++I
Sbjct: 1741 LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMI 1799
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 986 LSLLPSIMHRLENLLVAIE-LKHLLSASFPEGAEVSAEMLLKALTTEKCQERFSLERLEI 1044
L P+ L+ LL E + L F + + + M + T + + + +RLE
Sbjct: 1976 LHFAPNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY--QRLEF 2033
Query: 1045 LGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
LGDA L Y + RHL+ G LT RS VNN+ LA R+ + R
Sbjct: 2034 LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFR 2086
>sp|Q0UL22|DCL2_PHANO Dicer-like protein 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL2 PE=3 SV=2
Length = 1399
Score = 200 bits (508), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 188/669 (28%), Positives = 322/669 (48%), Gaps = 70/669 (10%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALVQ 119
R YQ E+ +++M+ NII + TG GKTHIA+ + R P K I FLAPTV L +
Sbjct: 12 RSYQAEMVEESMQSNIICVMDTGSGKTHIAIDRTRAELEICR-PDK-IVWFLAPTVTLCE 69
Query: 120 QQAKVIEESI-GFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQILLYCLYHRFI 175
QQ V + ++ G+ ++ G L D W+ + +++ Q+LL L H F+
Sbjct: 70 QQFAVFKSNLPGYGIQ-LLSGKDNLDHWTDQGVWDDVLLNIRIVLSTHQVLLDALSHGFV 128
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI-MKVPRIFGMTASPVVGKGASAQA 234
KM ++LLIFDE HH +K HP +IM DFYKP I ++PRI G++ASP+ +++
Sbjct: 129 KMRNLSLLIFDEAHHCSLK--HPAHRIMSDFYKPRIGTELPRILGLSASPIKTAKVTSE- 185
Query: 235 NLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYGPVINDTSS---SYVTCSE 290
+ +E L A V + + +L +V P + Y D S S++ +
Sbjct: 186 ----DLQQIERNLCATVKTPKLHRSELLRYVHRPHLMRIDYPVEPQDLQSNMLSFLKSAY 241
Query: 291 QLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMK-FCLENLGVCGALHASYI--- 346
+++++ ++S L L Q + TK ++++ K +C + L AL A +
Sbjct: 242 TNYDLQKDPWVSEL---LQQRQQGHDVTKNIHKVFIGGKTYCRDQLRSL-ALKAEAMSQE 297
Query: 347 --------LLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
L G T ++++ + + D E+ + D + D+ +
Sbjct: 298 LGMSVMDWYLRGCITQFSKMVHMSDSQLLDWSADEKRHLLEILRTLPSIDLNSHDIPPMS 357
Query: 399 VLKEPFFSKKLLRLIGIL-STFRLQQHMKCIVFVNRIVTARALSYIL----QNLKFLASW 453
+ S KL LI L + + C+VFV + V ++ +L + L
Sbjct: 358 LGS---MSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACIAEVLAIHPETRDLL--- 411
Query: 454 RCHFLVGVN------AGLKSMS--RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCL 505
R VG + A + S+S RN ++ LE FR+G+LNL++AT V EEG+D+ +C L
Sbjct: 412 RVGTFVGESENSKRKANIASISEPRN-QQATLENFRAGKLNLILATSVLEEGIDVSSCHL 470
Query: 506 VIRFDLPETVASFIQSRGRARMPQSEYA-FLVDSGNQRELDLIKNFSKEEDRMN------ 558
V+ F+ P+ + SF+Q RGRAR +S+Y F+ +G +R+ + ++ E+ M
Sbjct: 471 VVCFESPKNLKSFVQRRGRARKEESKYVIFVPQAGRRRDPE---SWQSLEEGMKAAYLDD 527
Query: 559 -REIMDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY 617
R++ T + + + R ++V S+GA ++ LH +CS L + + +P+F +
Sbjct: 528 LRQVKLATEKEQQSETGHRNFEVKSTGALLTLDNASQHLHHFCSILGAGPYIDNRPQFEF 587
Query: 618 FDDLGGTI-CHIILP--ANAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLL 673
+ G I +ILP + + + E AK+DA +A + L+ G +ND LL
Sbjct: 588 TEIRPGVITARVILPLTVDPEVRTACALDTWATEKMAKQDAAFEAYKALYVAGLVNDNLL 647
Query: 674 PQEDNATED 682
P A ++
Sbjct: 648 PARQEADDE 656
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 218/527 (41%), Gaps = 117/527 (22%)
Query: 988 LLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLL-KALTTEKCQERFSLERLEILG 1046
LLPSI+HR ++A L+ L P + + +LL +AL + + +RLE LG
Sbjct: 896 LLPSILHRFGMAIIAETLRTTLLG--PVALDSAHSLLLTRALKSSAADGNDNYQRLEFLG 953
Query: 1047 DAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQPFDPCQF 1106
D LK+ HL + E LT ++ V+N L + L ++ + F ++
Sbjct: 954 DCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFMITKSFTGAKW 1013
Query: 1107 FALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIADVVEALVGAF 1166
PR Y G + V+ + K IAD++E+L+GA
Sbjct: 1014 ------APR-------------YAGDLLAETGPAVKEERS-----SKLIADIIESLIGAC 1049
Query: 1167 IDDSGFKAATAFLK-------WIGIQVEFEASQVTNICISSKSFLPLSASLDMATLEILL 1219
GF+ A ++ WI + A+ + + +++ L + + LE L+
Sbjct: 1050 YTVGGFEKAVLCVQTLLPLEPWISVPA---ANSILHEAAPAEADL-----MGLDVLETLI 1101
Query: 1220 GHQFLHRGLLLQAFVHPSFN--RLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1277
G+ F + LLL+A H SF+ + Y+RLEFLGDAVLDY+I+ L++ P+L ++
Sbjct: 1102 GYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLDYIISKRLHAHSPELSHQKMH 1161
Query: 1278 DLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPRC-- 1335
+R+ VN SF F +F++ + ETIN M S R + + R
Sbjct: 1162 AIRTATVN----------ASFLAFRLFETTIDEETINK--TSMRPESQKRAIWQFLRSGS 1209
Query: 1336 -----------------------------------------PKVLGDLVESSLGAILLDS 1354
PK L D+VES +GA+ +DS
Sbjct: 1210 PSLNANRDNALRQHEQVRDEIIIGLNEAARFPWHLFALTDPPKFLSDMVESVIGAVYIDS 1269
Query: 1355 GFNLNTVWKI-----MLSFLDPILKFSNLQLNPIRELLELCNSYDLDLQFPSL------K 1403
++ T I +L LD IL L+P L L + D +Q+ +
Sbjct: 1270 LGDILTCEAIVRRLGILDCLDHILCNGVDCLHPKERLGHL--AVDKGVQYARVGMNTEPN 1327
Query: 1404 KGGK-FLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKA 1449
+G K + + KV G+D + A L R A +A+ + L++
Sbjct: 1328 EGDKMYKCQVKVGGED----VGDVAEGLKRLNAETVAAWKAVGVLES 1370
>sp|Q1DW80|DCL2_COCIM Dicer-like protein 2 OS=Coccidioides immitis (strain RS) GN=DCL2
PE=3 SV=3
Length = 1435
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 181/660 (27%), Positives = 308/660 (46%), Gaps = 66/660 (10%)
Query: 55 PKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPT 114
P + AR YQLE+ +++ +NIIV + TG GKT IA+L I L R P F+APT
Sbjct: 43 PPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQR--ELERCPAHKFVWFMAPT 100
Query: 115 VALVQQQAKVIEESI-GFKVRTFCGGSKRLKSHCD----WEKEIDQYEVLVMIPQILLYC 169
VALV+QQ I + + F+ R G + SH W+ + +++ PQ+LL
Sbjct: 101 VALVEQQHSAISKQLPAFQTRLLTGAAN--VSHWSTKKIWDDILLNIRIVISTPQVLLDA 158
Query: 170 LYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFY-----KPDIMKVPRIFGMTASP 224
L + F+ + I+LL+FDE HH + P +IM+DFY + +P I G+TASP
Sbjct: 159 LSNGFVDLHTISLLVFDEAHHC--VRDAPANRIMRDFYHYHRQEEGTDGLPHILGLTASP 216
Query: 225 VVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSS 284
+ L ++N++ + K++ E++ FV P R +Y P + + SS
Sbjct: 217 TTRARQTDLEVLEINLNAV--CVTPKMHR----EEMMQFVHMPEYRSIEYQPDVQNFSSI 270
Query: 285 YVTCSEQLAE--IKREQYISALSRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGVC---- 338
S + E I+ + ++ + R+ L++ + L+ L + CL+ L C
Sbjct: 271 VEKLSVIINELDIENDPFVKFMRRR----NDLKSRQRLLDALENKKTPCLDQLKRCLRRS 326
Query: 339 GALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIE 398
+H + + + ++ + + S ++A E + + + ++ +S E
Sbjct: 327 RVIHRELGPWASERFLTRCIMGLKSKQTNASGPQWADWDREDNSYML--NVLSQVVSSTE 384
Query: 399 V-LKEPFFSKKLLRLIGILSTFRLQQHMK---CIVFVNRIVTARALSYILQNLKFLASWR 454
+ ++ P +L R + L F + +H+ IVF L+ +L +
Sbjct: 385 MGVQNP--PDELSRKVHKLIDFLVLEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIK 442
Query: 455 CHFLVGVNAGLKSMSRNA----------MKSILEKFRSGELNLLVATKVGEEGLDIQTCC 504
+G +A S+SR + + ++ R+G+ +L++AT V EEG+D+ C
Sbjct: 443 TTAFLGSSA---SVSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICD 499
Query: 505 LVIRFDLPETVASFIQSRGRARMPQSEYAFLV---DSGNQRELDLIKNFSKEEDRMNREI 561
LVI FDLP+ + SFIQ RGRAR S++A + D EL L++ K+ N+
Sbjct: 500 LVICFDLPKDLRSFIQRRGRARKKGSKFALFLHSEDRATSSELHLMEKTMKQLYLENKRA 559
Query: 562 MDRTSSDAFTCSEERIY---KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYY- 617
++ EE Y +V S+GA ++ + L +C L EF P+F
Sbjct: 560 LEHIQ--YLENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTLS-AEFIATDPEFVLE 616
Query: 618 FDDLGGTICHIILPA--NAPIHQIVGTPQSSMEA-AKKDACLKAIEDLHKLGALNDYLLP 674
DD G +ILP+ + + + G E AK+DA +A L++ G +NDYL+P
Sbjct: 617 GDDTTGFSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMP 676
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 39/328 (11%)
Query: 964 DDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEM 1023
D LP E Q + +P ++H +EN +A EL + P G + +
Sbjct: 930 DRLPVEYSQFAL------------FIPCLIHSIENYFIANELAQTIL--HPVGFS-NLSL 974
Query: 1024 LLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNL 1083
+L A+++ +E + +RLE LGD+ LK L H EG LT R+ N V+N L
Sbjct: 975 VLTAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYL 1034
Query: 1084 LKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRC 1143
A + L +I +PF ++ + + T H D+ R
Sbjct: 1035 ANAALQTGLDKFILTKPFTGAKW------------RPSYNTDHIN-----TGDMTEPTRE 1077
Query: 1144 SKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEA-SQVTNICISSKS 1202
+ K +ADVVEAL+GA D G LK +++ ++ NI +
Sbjct: 1078 ------MSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKWSPLNECVNILHHQED 1131
Query: 1203 FLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+ ++ +E L+G+ F + LLL A HPS G YQRLEF+GD++LD ++
Sbjct: 1132 SFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSSKGSGHSYQRLEFVGDSILDIIVVQ 1191
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFA 1290
L+ + +R+ LVN A
Sbjct: 1192 ELFESPRCFHHFDMHLMRTALVNADFLA 1219
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 1223 FLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSM 1282
F + L+L A + S R YQRLEFLGD++L + L + +P G+LT +
Sbjct: 969 FSNLSLVLTA-ISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGN 1027
Query: 1283 LVNNQAFANVAVDQSFYKFLIFDSNVLSETINNY-VDYMITPSSTREVKEGPRCPKVLGD 1341
+V+N AN A+ KF++ ++ +Y D++ T T +E KVL D
Sbjct: 1028 IVSNGYLANAALQTGLDKFILTKPFTGAKWRPSYNTDHINTGDMTEPTRE--MSTKVLAD 1085
Query: 1342 LVESSLGAILLDSGFNLNTVWKIM--LSFLDPILKFSNLQ 1379
+VE+ +GA +D G N KI+ L P +K+S L
Sbjct: 1086 VVEALIGAANIDGGEN-----KILNCLKIFIPDIKWSPLN 1120
>sp|A4RHU9|DCL2_MAGO7 Dicer-like protein 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL2 PE=3 SV=3
Length = 1485
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 204/689 (29%), Positives = 304/689 (44%), Gaps = 101/689 (14%)
Query: 49 QKTDKDPKQI-ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSI 107
Q + P+ I AR YQLE+ + +M++NIIV + TG GKT +AVL I A L R P +
Sbjct: 54 QPSGNGPRSIIARAYQLEMFQASMQQNIIVSMDTGSGKTQVAVLRIR--AELERTPPEKR 111
Query: 108 CIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCD---WEKEIDQYEVLVMIPQ 164
FLAPTVAL QQ +VI I G + S D W+ + V+V
Sbjct: 112 VWFLAPTVALCAQQYEVIRSQIKVANSIVMTGDDNVDSWSDVQTWDAVLANVRVVVCTYM 171
Query: 165 ILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK---VPRIFGMT 221
IL L H F+ M+ I+LL+ DE H+ K P IMK FY P VP I G+T
Sbjct: 172 ILFEALSHAFVTMDSISLLVMDEAHNCTGK--FPGRLIMKRFYMPRKSAGDHVPHILGLT 229
Query: 222 ASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQY------G 275
ASPV+ S+ +L S++S+ + +++ E+L + V P + V Y
Sbjct: 230 ASPVMKSDLSSMEDLESSLDSV-----CRGPTLQ-REELFANVHQPTMTVTTYKECDLRS 283
Query: 276 PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLR--------------NTTKQL 321
PV + + + + + +I + Y+ L + +SLR N K L
Sbjct: 284 PVQYTRNMNNLHLAFENLDIAEDPYVLHLMGQ-RTPKSLRELDRILTKLDTYTQNQMKAL 342
Query: 322 NRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVF 381
R S+ L V ++ +S + + L G +DD R+ +A +
Sbjct: 343 QRKSSSLFRELGQWAVDSYIYNVVEKVSNLDARSSWL----GGWLDDE-QRYLHRAIQGI 397
Query: 382 AAICRRDGI-ASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARAL 440
A+ I A +++ I KL L+ IL + + IVFV TA L
Sbjct: 398 NALPVSAAIPAPEMTSI----------KLQVLLRILRGY--EGSPVGIVFVKERATAGIL 445
Query: 441 SYILQNLKFLASWRCHFLVGVNAGL-KSMSR--NAMKSI--------LEKFRSGELNLLV 489
S Q L + + VG G + MSR N + + LEKFRSG +NLLV
Sbjct: 446 S---QLLAIIPDINARYKVGCMVGTSRYMSRKMNIHEVLQQGDDLLALEKFRSGAINLLV 502
Query: 490 ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD------------ 537
AT V EEG+D+ C LVI FD+P + SFIQ RGRARM +S+ +++
Sbjct: 503 ATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRGRARMRESKLHLMIEEDSLVSVKDWGA 562
Query: 538 ---------SGNQRELDLIKNFSKEEDRMNREIMDRTSSDAFTCSEERIYKVDSSGACIS 588
+ RELD + +E++ + RT++ T + + +
Sbjct: 563 LEAAMKQRYENDMRELDHLAQVEEEDEMDVPPLHSRTTAAKVTVDDAKGHLEHFCRVVTR 622
Query: 589 AGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTICHIILPANAP--IHQIVGTPQS- 645
+ V Y F KP LG T ++LPA+ P + Q +
Sbjct: 623 SQQYVDASPEYLVTTKTTAFVGGKP----IPILGVT---VLLPASLPPNLRQAHSSRDWI 675
Query: 646 SMEAAKKDACLKAIEDLHKLGALNDYLLP 674
S AKKDA L+A + L++ G +N++LLP
Sbjct: 676 SERNAKKDAALQAYKMLYEAGLINEHLLP 704
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 148/346 (42%), Gaps = 63/346 (18%)
Query: 963 FDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAE 1022
FD +P L QL + L+PSI +E VA EL + + ++ +
Sbjct: 961 FDTVPATLVQLGM------------LVPSITQAMEPYFVAQELLRRTALGSLDFKDI--D 1006
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+++ +T+ + ER+E LGDA LK + EG L+ + V+NS
Sbjct: 1007 LVMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDRLVSNSR 1066
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L K A L +I I QY + ++
Sbjct: 1067 LCKAATALGLDQFI----------------------------ITRQYSLKQWRNMLTAPE 1098
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQVTNICISSKS 1202
+ KT+ADV EAL+GA + G A L+ I + + E + + S++
Sbjct: 1099 PPTNTRKMSSKTLADVTEALIGAAYIEGGMSKA---LRCISLMIPNERWRSLD---ESRA 1152
Query: 1203 FL--------PLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN---RLGGCYQRLEFL 1251
L PL ++L LE LLG+ F + LL++A H S+N G +RLEFL
Sbjct: 1153 VLYQVALNDIPLPSTL--GPLEELLGYSFNKKSLLIEAITHASYNIPGSAGSSLERLEFL 1210
Query: 1252 GDAVLDYLITSYLYSVY--PKLKPGQLTDLRSMLVNNQAFANVAVD 1295
GD+VLD+++ + L+SV ++ + LR+ +VN + +A++
Sbjct: 1211 GDSVLDFVVVARLFSVKDPAPIEHYNMHLLRTAVVNGEFLGFLAME 1256
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 1228 LLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQ 1287
L++ S RL Y+R+EFLGDAVL + G L+ L+ LV+N
Sbjct: 1007 LVMMVITSSSAGRLTN-YERVEFLGDAVLKLGAAVTCATNNLHFPEGYLSLLKDRLVSNS 1065
Query: 1288 AFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT----PSSTREVKEGPRCPKVLGDLV 1343
A +F+I L + N M+T P++TR++ K L D+
Sbjct: 1066 RLCKAATALGLDQFIITRQYSLKQWRN-----MLTAPEPPTNTRKMSS-----KTLADVT 1115
Query: 1344 ESSLGAILLDSGFN 1357
E+ +GA ++ G +
Sbjct: 1116 EALIGAAYIEGGMS 1129
>sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=dcl2-2 PE=3 SV=2
Length = 1362
Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 181/688 (26%), Positives = 312/688 (45%), Gaps = 85/688 (12%)
Query: 35 VSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIY 94
S + A+S+ G T + + R+YQLE+ ++++ N+IV + TG GKT +A+L I
Sbjct: 2 TSSTDYHADSTPG---TTSNMELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVAILRI- 57
Query: 95 ELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEID 154
LA + + L PTVAL +QQ I + G++ W+ +
Sbjct: 58 -LADIDKGNSDKFVWLLCPTVALSEQQY------IQYATVFLPSGAE---DKAIWDNALS 107
Query: 155 QYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKV 214
++ V Q+L L H F+K+ ++LLIFDE HH K +H KIM+ Y
Sbjct: 108 GIKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHC--KKDHVANKIMQVHYH------ 159
Query: 215 PRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSVEDAE-DLESFVSSP---VVR 270
+ S NLPK + + + + + S+E E +L S +P +
Sbjct: 160 ------------KQHQSGVQNLPKILGLTASPILSDLSSLEIVESNLGSICKTPRQYYAQ 207
Query: 271 VYQYG--PVINDTSSSYVTCSEQLAEIKREQYISALSRKLHDHQSLRNTTKQLNRLHDSM 328
+ Q+ P+I +Y + + E+ LS + S + +KQL + M
Sbjct: 208 LLQFTNRPLILPRLPTYTIPNCSVKAPILEKLCGILSSEDEVPSSSKMKSKQLKHIRRFM 267
Query: 329 KFCL---ENLGVCGAL-HASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI 384
+ + LG+ A + ++ E+MR + AE I + FA + I
Sbjct: 268 QTSESINQELGIWAATEYMRKSIMHFKESMR---MGAEKTNISNYGKDFAME-------I 317
Query: 385 CRRDGIASDLSCIEVLKEPFFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYIL 444
R G D C ++ S L+ LS ++ +VFV + T AL +++
Sbjct: 318 LTRLGKLQD--CSPAIQPEEISPMCQCLLDELSK-AYREGFCGLVFVTQRATVLALKWLI 374
Query: 445 QNLKFLAS-WRCHFLVGVNAGLKSMS--------RNAMKSILEKFRSGELNLLVATKVGE 495
+N + + C +G++ S + RN ++ LEKFR G LNL++ T E
Sbjct: 375 ENHPLTSHLFTCGTFIGMSTTQYSKTELGNLHDIRNQTET-LEKFRQGSLNLIITTDALE 433
Query: 496 EGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV--DSG----NQRELDLIKN 549
EG+D+ C V+ F+ ++ SFIQ RGRAR S++ ++ +SG + E++ I+
Sbjct: 434 EGIDVPACNTVLNFNCQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEIEL 493
Query: 550 FSKEEDRMNREI-MDRTSSDAFTCSEERI---YKVDSSGACISAGYGVSLLHRYCSKLPH 605
K ++ R+I + D + ERI +D +GA + V L+ +CSKLP
Sbjct: 494 VQKLQNAERRQIPANELDFDKY----ERISLSLDIDRTGAQLIMREAVGYLYNFCSKLPA 549
Query: 606 DEFFNPKPKFYYFDDLGGTICHII-LPAN---APIHQIVGTPQSSMEAAKKDACLKAIED 661
+ + KP F Y + G ++ LP+N + S ++ A++DA L+A +
Sbjct: 550 QLYVSNKPLFTYERNNYGRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKA 609
Query: 662 LHKLGALNDYLLPQEDNATEDEPMLFSS 689
L++ G +NDYL+P + + + ++F S
Sbjct: 610 LYQAGLVNDYLVPTQVSDHLEGDIIFRS 637
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 179/439 (40%), Gaps = 80/439 (18%)
Query: 962 YFDDLPPELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSA 1021
+ D LP Q+ + PSI H +E ++A L+ LS +
Sbjct: 861 FVDKLPSMFAQVAL------------FTPSISHEVEVYMIAQILRQELSLRSVTPWQ-RI 907
Query: 1022 EMLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNS 1081
++L A+ + R + L +GDAF+KY LFL H EG L+ + ++++
Sbjct: 908 DLLAIAIRPTSIEHRATFRLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDA 967
Query: 1082 NLLKLAARNNLQVYIRDQPFDPCQFFALGRR-CPRICSKETERTIHSQYDGRAPDDLNAE 1140
L ++ L ++ + + G+R P + S G P A
Sbjct: 968 GLAHAIHQSGLGKFLISKHLN-------GKRWVPPLVS------------GIEPASNEAR 1008
Query: 1141 VRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVE-FEASQVTNICIS 1199
R + T+AD+ +A+VGA D G A A + +++ + AS + + S
Sbjct: 1009 QRS------IGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDGTYS 1062
Query: 1200 SKSFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFNRL--GGCYQRLEFLGDAVLD 1257
AS + +E LLG+ F + L +++ HPS L Y+RL FLG +VL+
Sbjct: 1063 KTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1122
Query: 1258 YLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAV------DQS-------------- 1297
+++ SYL+ + P ++ L+S NN +A+ +Q+
Sbjct: 1123 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1182
Query: 1298 ------FYKFLIFDSNVLSETINNYVDYMITPSST--REVKEGPRCP----------KVL 1339
+ FL S+ LS ++++V + E+ E P +VL
Sbjct: 1183 TTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALGDMRVL 1242
Query: 1340 GDLVESSLGAILLDSGFNL 1358
D+++S GA+ +DS L
Sbjct: 1243 SDIIQSIFGAVFIDSQATL 1261
>sp|Q7SCC1|DCL2_NEUCR Dicer-like protein 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-2
PE=2 SV=3
Length = 1540
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 182/669 (27%), Positives = 291/669 (43%), Gaps = 100/669 (14%)
Query: 59 ARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIRKPQKSICIFLAPTVALV 118
AR YQLE+ + ++++NIIV L + ++ H + I FL PTVAL
Sbjct: 71 ARAYQLEMFEASLKQNIIVALFSD--------RVMVADGHWQWQDSGRIW-FLTPTVALA 121
Query: 119 QQQAKVIEESI-GFKVRTFCG--GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
+QQ +V++ I K CG G W+ + ++V QIL H F+
Sbjct: 122 RQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSFV 181
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI---MKVPRIFGMTASPVVGKGASA 232
+++ ++L++ DE H+ +HP A++M + Y P + VP I G+TASP+
Sbjct: 182 RLDSLSLIVIDEAHNC--SGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPL------- 232
Query: 233 QANLPKSINSLENLLDAKVYSVE-DAEDLESFVSSPVVRVYQYG-----PVINDTSSSYV 286
++N I LE +LDA + E+L + V+ P + V YG P D + ++
Sbjct: 233 KSNNLADIEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRFL 292
Query: 287 TCSEQLAEIKREQYISAL--SRKLHDHQSLRNTTKQLNRLHDSMKFCLENLGV-----CG 339
+L +I ++ + L R + LR + + L + N + G
Sbjct: 293 EAYHRL-DISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYNRALLVRREIG 351
Query: 340 ALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAICRRDGIASDLSCIEV 399
A Y L M EL E + R+ +A + +
Sbjct: 352 PWAADYYLTRTVSHMLAELERGEP----PAQHRYIGEA-------------LRSIPIPAI 394
Query: 400 LKEPF-FSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALSYILQNLKFLAS-WRCHF 457
KEP S K+ L+ +L++ QQ IVFV V +++I+ +R
Sbjct: 395 SKEPIQLSPKVQTLLKVLASH--QQDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTAS 452
Query: 458 LVGVNAGLKSMSRNAMK-------SILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFD 510
++G A + +RN M + LE FR G NLLVAT V EEG+D+ C LVI FD
Sbjct: 453 MIGT-ASVPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFD 511
Query: 511 LPETVASFIQSRGRARMPQSEYAFLVDSGNQRELD-------LIKNFSKEEDRMNR--EI 561
P + SFIQ RGRAR S +V + + L+K ++E R N E+
Sbjct: 512 EPSNIKSFIQRRGRAREVSSTLYLMVQNASSESATDWHNLERLMKERYEDEMRQNAELEL 571
Query: 562 MDRTSSDAFTCSEERIYKVDSSGACISAGYGVSLLHRYCSK-------LPHDEFF----- 609
+D ++ + +V+S+GA ++ S L+ +C+K L + +F
Sbjct: 572 LDDPRIGSYP-----VLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYFVIRQV 626
Query: 610 NPKPKFYYFDDLGGTICHIILPAN-AP---IHQIVGTPQSSMEAAKKDACLKAIEDLHKL 665
NP P L H LPA+ AP H+ + T +S + A DA +A + L+
Sbjct: 627 NPDPASPGRRTLLQATVH--LPASLAPDLRRHESLWT-WTSEKLAIMDASFQAYKALYNA 683
Query: 666 GALNDYLLP 674
G +N+ LLP
Sbjct: 684 GLVNENLLP 692
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 126/315 (40%), Gaps = 49/315 (15%)
Query: 971 CQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKH-----LLSASFPEGAEVSAEMLL 1025
Q+++ F +++P+ +E LVA +L + L + P ++
Sbjct: 932 TQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLP--------LIT 983
Query: 1026 KALTTEKCQERFSLERLEILGDAFLKYA---VGRHLFLLHDTVD---EGELTRRRSNAVN 1079
AL + + + ERLE +GD LK+ L H V E L++ + VN
Sbjct: 984 TALISSGSRGPTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVN 1043
Query: 1080 NSNLLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNA 1139
N L + + L YI + SK+ Y ++A
Sbjct: 1044 NVRLCRASRDFGLDEYIINS----------------AASKKWRPKFVEDYMDEMKSPISA 1087
Query: 1140 EVRCSKGHHWLHKKTIADVVEALVGAFIDDSGFKAA---TAFLKWIGIQVEFEASQVTNI 1196
E R + K +ADVVE+L+GA G A A L +F+ ++
Sbjct: 1088 ETRQ------MSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEIELS 1141
Query: 1197 CISSKSFLPLSASL--DMATLEILLGHQFLHRGLLLQAFVHPSFNRLG---GCYQRLEFL 1251
F P A L + LE + + F + LL++A HPS LG CY+RLEFL
Sbjct: 1142 RTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERLEFL 1201
Query: 1252 GDAVLDYLITSYLYS 1266
GDA+LD ++ L +
Sbjct: 1202 GDAILDVIVVKRLMA 1216
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 1245 YQRLEFLGDAVLDY---LITSYL---YSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
Y+RLEF+GD +L + L S L +S+ P L+ + LVNN + D
Sbjct: 997 YERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRASRDFGL 1056
Query: 1299 YKFLIFDS---NVLSETINNYVDYMITPSS--TREVKEGPRCPKVLGDLVESSLGAILLD 1353
+++I + + + +Y+D M +P S TR++ K++ D+VES +GA +
Sbjct: 1057 DEYIINSAASKKWRPKFVEDYMDEMKSPISAETRQMSS-----KMVADVVESLIGAAYMC 1111
Query: 1354 SGFN 1357
G +
Sbjct: 1112 GGMS 1115
>sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus GN=Dicer1 PE=1 SV=3
Length = 1916
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 279/659 (42%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 564
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEERIY-------------- 578
D+ D IK+F EED + +I+ S + +E ++
Sbjct: 565 DT------DKIKSF--EEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPPYVL 616
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 RPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 676
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S+ A++ L E LHK+G L+++L+P + D +
Sbjct: 677 ASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 736
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 737 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 796
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 797 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 853
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+K + S
Sbjct: 854 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSGTLDIDFKFMEDIEKSEA 905
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 906 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 114/193 (59%), Gaps = 17/193 (8%)
Query: 1214 TLEILLGHQFLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKL 1271
T E + ++F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY +
Sbjct: 1662 TFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQH 1721
Query: 1272 KPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKE 1331
PG LTDLRS LVNN FA++AV ++K+ S L I+++V + + + + +
Sbjct: 1722 SPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDS 1781
Query: 1332 GPR-------------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS- 1376
R PK +GD+ ES GAI +DSG +L VW++ + P++ KFS
Sbjct: 1782 ELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSA 1841
Query: 1377 NLQLNPIRELLEL 1389
N+ +P+RELLE+
Sbjct: 1842 NVPRSPVRELLEM 1854
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M+ ++ L ++ + S + + ++L+ALT + F
Sbjct: 1251 TSDGSPAVSTMPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGF 1310
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1311 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1370
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1371 VSIFDP 1376
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1696 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1753
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1754 AVSPELFHVI------------DDFVKFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1801
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1802 MGDIFESLAGAIYMDSGM 1819
>sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicalis GN=dicer1 PE=2 SV=2
Length = 1893
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 152/301 (50%), Gaps = 64/301 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQVEFEASQV---TNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++V E ++ TN+ +S S+
Sbjct: 1531 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPEVRKLVTNTNVISASSSYQNSTRD 1590
Query: 1204 ---LPLSASLDMAT-----------------------------------LEILLGHQFLH 1225
L + D+++ E + + F +
Sbjct: 1591 NCTLTARTNTDLSSCKGIDYGYLKIPPRCMFEHPDAEKTLDHLISGFENFEKKINYPFKN 1650
Query: 1226 RGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSML 1283
+ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS L
Sbjct: 1651 KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL 1710
Query: 1284 VNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR--------- 1334
VNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1711 VNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKE 1770
Query: 1335 ----CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRELLE 1388
PK +GD+ ES GAI +DSG +L TVW + + P++ KFS N+ +P+RELLE
Sbjct: 1771 EDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPRSPVRELLE 1830
Query: 1389 L 1389
+
Sbjct: 1831 M 1831
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 169/661 (25%), Positives = 269/661 (40%), Gaps = 113/661 (17%)
Query: 428 IVFVNRIVTARALSYILQN-------LKFLASWRCHFLVGVNAGLKSMSRNAM------- 473
I+FV R TA L+ +++ L +++S +F+ G G K+ RN
Sbjct: 436 IIFVERRYTAVVLNRLIKEAGKQDPELAYISS---NFITGHGIG-KNQPRNKQMEVEFRK 491
Query: 474 -KSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 532
+ +L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y
Sbjct: 492 QEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKGRARAPISNY 551
Query: 533 AFLVDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER------------ 576
L DS D IK F EED + +I+ S + C
Sbjct: 552 IMLADS------DKIKAF--EEDLKTYKAIEKILRNKCSKSIDCGNTESEPIVDDDEIFP 603
Query: 577 --IYKVDSSGACISAGYGVSLLHRYCSKLPHDEF--FNPKPKFYYFDDLGGTICHIILPA 632
+ + D ++ + ++RYC++LP D F PK K F D G + LP
Sbjct: 604 PYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTREFPD-GLYRSTLYLPI 662
Query: 633 NAPIHQ-IVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPML 686
N+P+ IVG P + A + L + LH++G L+D+L+P + D
Sbjct: 663 NSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMPVGKETVKYEEELDLHDE 722
Query: 687 FSSDSDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD-------- 735
+ G R + + +P LR S+ K P L M +PD
Sbjct: 723 EETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQPCYLYVIGMVLTTPLPDELNFRRRK 782
Query: 736 --PADRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLK 792
P + R FG+ +P + H V + G ++ +L SG + E+ +
Sbjct: 783 LYPPEDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLNLEQLELITR 839
Query: 793 V-------ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRC 841
+ IL + EF P D Y +LP+ +S +D+K +
Sbjct: 840 LHQYIFSHILRLEKPALEFKPTVAD--------CAYCVLPLNVVNDSGTLDIDFKFVEDI 891
Query: 842 LSSPV-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKK--WFYLVTNIVF 898
S G P +S P L+ + + ++Y + FY V ++
Sbjct: 892 EKSEARTGIPNTQYSAES-PFIFKLE---DYQDAVIIPRQVIYRNFDQPHRFY-VADVYT 946
Query: 899 EKNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED----- 953
+ S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 947 DLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKAL 1006
Query: 954 --SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIEL 1005
S + + + ++ L PELC + + S + LPSI++RL LL A EL
Sbjct: 1007 PLSSAEKRKAKWESLQNKQILVPELCAIHPVPAS--LWRKAVCLPSILYRLHCLLTAEEL 1064
Query: 1006 K 1006
+
Sbjct: 1065 R 1065
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 112/229 (48%), Gaps = 16/229 (6%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L +G GKT IAVLL EL++ IR +FL +
Sbjct: 35 RKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNTKRTVFLVNSEK 94
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHC----DWEKEIDQYEVLVMIPQILLYCLYH 172
V QQ + KV + S + K+ C W E + ++VLVM I L L
Sbjct: 95 QVSQQVSAVRTHTDLKVGEY---SDQEKTQCWAKERWYLEFETHQVLVMTCHIFLNVLKS 151
Query: 173 RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASA 232
+ + I LL+FDECH A +HPY +IMK PRI G+TAS + GK
Sbjct: 152 GNVSLSNINLLVFDECHLA--IQDHPYREIMK--ICESCQPCPRILGLTASILNGK--CD 205
Query: 233 QANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
+L + I LE +L + + D L+ + S P V GP I+ +
Sbjct: 206 PRDLEEKIQKLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYIDKS 254
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1273 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1332
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + + FDP
Sbjct: 1333 LYRLGKKKGSPSRMVVSIFDP 1353
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1272 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1330
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1673 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1730
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1731 AISPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1778
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1779 MGDIFESLAGAIYMDSGMSLETVW 1802
>sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3
Length = 1922
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 277/660 (41%), Gaps = 114/660 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + E +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ + P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG M + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFMLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSE 904
Query: 846 V-FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFE 899
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARIGIPSTKYTKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTD 953
Query: 900 KNGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------ 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 LTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALP 1013
Query: 954 -SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 LSSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQ---VEFEASQVTNICISSKSF------ 1203
K+IAD VEAL+G ++ G +AA FL +G++ V + +C + ++F
Sbjct: 1557 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKN 1616
Query: 1204 ---------------------------LPLSASLDMATLEILLGH--------------Q 1222
+P D + L H +
Sbjct: 1617 LSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYR 1676
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1677 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1736
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1737 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1796
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1797 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1856
Query: 1386 LLEL 1389
LLE+
Sbjct: 1857 LLEM 1860
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDTSSSY 285
+ L + I LE +L + + D L+ + S P V GP D S Y
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGP-FTDRSGLY 267
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1355
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1356 LYRLGKKKGLPSRMVVSIFDP 1376
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1702 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1759
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1760 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1807
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1808 MGDIFESLAGAIYMDSGMSLETVW 1831
>sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseus GN=DICER1 PE=2 SV=3
Length = 1917
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 150/303 (49%), Gaps = 66/303 (21%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV------------------EFEASQ-- 1192
K+IAD VEAL+G ++ G +AA FL +G++V F + Q
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQQKS 1612
Query: 1193 VTNICISSKSFLPLSASLDMA-----------------------------TLEILLGHQF 1223
++ C ++ + SA D+ E + ++F
Sbjct: 1613 LSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYRF 1672
Query: 1224 LHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRS 1281
++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLRS
Sbjct: 1673 KNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRS 1732
Query: 1282 MLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------- 1334
LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1733 ALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEE 1792
Query: 1335 ------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIREL 1386
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+REL
Sbjct: 1793 KEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVREL 1852
Query: 1387 LEL 1389
LE+
Sbjct: 1853 LEM 1855
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 167/659 (25%), Positives = 276/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAMKS-------I 476
I+FV R TA L+ +++ LA +F+ G G M++ +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEV 504
Query: 477 LEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 536
L KFR+ E NLL+AT V EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 505 LRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLA 564
Query: 537 DSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------IY 578
D+ D I++F EED + +I+ S + +E +
Sbjct: 565 DT------DKIQSF--EEDLKTYKAIEKILRNKCSKSVDGAEADVDAVVDDDDVFPPYVL 616
Query: 579 KVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
+ D G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 617 RPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTQELPDGTFYSTLYLPINSPLR 676
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P + A++ L E LHK+G L+++L+P + D +
Sbjct: 677 ASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSV 736
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ K P L M +PD P +
Sbjct: 737 PGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 796
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG +QQ E+ ++
Sbjct: 797 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSQQMLELITRLHQYI 853
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P G + + Y +LP+ +S +D+ + S
Sbjct: 854 FSHILRLEKPALEFKPTG--------AESAYCVLPLNVVNDSSTLDIDFTFMEDIEKSEA 905
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 906 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL ELAH IR P+ +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ + W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCESCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYASQPCEIVVDCGPFTD 262
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 979 SKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGA-EVSAEMLLKALTTEKCQERF 1037
+ D ++S +P++M L ++ + SA + + ++L+ALT + F
Sbjct: 1251 TSDGSPAVSTMPAVMSAGRALKDRMDSEQSPSAGYSSRTLGPNPGLILQALTLSNASDGF 1310
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N NL +L + L +
Sbjct: 1311 NLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMV 1370
Query: 1098 DQPFDP 1103
FDP
Sbjct: 1371 VSIFDP 1376
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1295 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1353
Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1697 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1754
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1755 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1802
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1803 MGDIFESLAGAIYMDSGM 1820
>sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus GN=DICER1 PE=2 SV=3
Length = 1923
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 148/304 (48%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-----------------EFEASQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V E SQ N
Sbjct: 1558 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKN 1617
Query: 1196 ICISSKSF-------------------LPLSASLD--------------MATLEILLGHQ 1222
+ S + +P D E + ++
Sbjct: 1618 LSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEKKINYR 1677
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1678 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1737
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1738 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDE 1797
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L TVW++ + P++ KFS N+ +P+RE
Sbjct: 1798 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRE 1857
Query: 1386 LLEL 1389
LLE+
Sbjct: 1858 LLEM 1861
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 276/659 (41%), Gaps = 113/659 (17%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEAEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 563
Query: 536 VDSGNQRELDLIKNFSKEEDRMNREIMDR-------TSSDAFTCSEERIYKVDS------ 582
D+ D IK+F EED + +++ S D E + D
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYV 615
Query: 583 ----SGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPIH 637
G ++ + ++RYC++LP D F + PK + GT + LP N+P+
Sbjct: 616 LRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLR 675
Query: 638 -QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSDS 691
IVG P S + A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 ASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSV 735
Query: 692 DSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PAD 738
G R + + +P LR+S+ + P L M +PD P +
Sbjct: 736 PGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE 795
Query: 739 RIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV---- 793
R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 DTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQYI 852
Query: 794 ---ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSPV 846
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 FSHILRLEKPALEFKPTDAD--------SAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEA 904
Query: 847 -FGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
G P +++ P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 RIGIPSTKYSKET-PFVFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 953
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 954 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1013
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1014 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1070
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEK-----EIDQYEVLVMIPQILLYCLY 171
V QQ + KV G L+ W K E +++VL+M + L L
Sbjct: 105 QVAQQVSAVRTHSDLKV----GEYSNLEVSASWTKEKWNQEFTKHQVLIMTCYVALNVLK 160
Query: 172 HRFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGAS 231
+ ++ + I LL+FDECH A + +HPY +IMK + PRI G+TAS + GK
Sbjct: 161 NGYLSLSDINLLVFDECHLAIL--DHPYREIMK--LCENCPSCPRILGLTASILNGKCDP 216
Query: 232 AQANLPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVIN 279
+ L + I LE +L + + D L+ + S P V GP +
Sbjct: 217 EE--LEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTD 262
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGR-HLFLLHDTVDEGELTRRRSNAVNNS 1081
++L+ALT + F+LERLE+LGD+FLK+A+ L L EG L+ RS V+N
Sbjct: 1296 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNC 1355
Query: 1082 NLLKLAARNNLQVYIRDQPFDP 1103
NL +L + L + FDP
Sbjct: 1356 NLYRLGKKKGLPSRMVVSIFDP 1377
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1703 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1760
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1761 AVSPELFHVI------------DDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1808
Query: 1155 IADVVEALVGAFIDDSGFKAATAF 1178
+ D+ E+L GA DSG T +
Sbjct: 1809 MGDIFESLAGAIYMDSGMSLETVW 1832
>sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus GN=DICER1 PE=2 SV=3
Length = 1921
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 67/304 (22%)
Query: 1153 KTIADVVEALVGAFIDDSGFKAATAFLKWIGIQV-------EFEA----------SQVTN 1195
K+IAD VEAL+G ++ G +AA FL +G++V ++E+ S+ N
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSEQKN 1615
Query: 1196 ICISSKSF-------------------LPLSASLDMATLEILLGH--------------Q 1222
+ +S S +P D E L H
Sbjct: 1616 LSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYS 1675
Query: 1223 FLHRGLLLQAFVHPSF--NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLR 1280
F ++ LLQAF H S+ N + CYQRLEFLGDA+LDYLIT +LY + PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735
Query: 1281 SMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR------ 1334
S LVNN FA++AV ++K+ S L I+++V + + + + + R
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1795
Query: 1335 -------CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPIL-KFS-NLQLNPIRE 1385
PK +GD+ ES GAI +DSG +L VW++ + P++ KFS N+ +P+RE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855
Query: 1386 LLEL 1389
LLE+
Sbjct: 1856 LLEM 1859
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 273/659 (41%), Gaps = 112/659 (16%)
Query: 428 IVFVNRIVTARALSYILQNL----KFLASWRCHFLVGVNAGLKSMSRNAM--------KS 475
I+FV R TA L+ +++ LA +F+ G G K+ RN +
Sbjct: 445 IIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIG-KNQPRNKQMEVEFRKQEE 503
Query: 476 ILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFL 535
+L KFR+ E NLL+AT + EEG+DI C LV+RFDLP S++QS+GRAR P S Y L
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 536 VDSGNQRELDLIKNFSKEED----RMNREIMDRTSSDAFTCSEER--------------I 577
D+ D IK+F EED + +I+ S + SE +
Sbjct: 564 ADT------DKIKSF--EEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDDVFPPYV 615
Query: 578 YKVDSSGACISAGYGVSLLHRYCSKLPHDEFFNPKPKFYYFDDLGGTI-CHIILPANAPI 636
+ D + ++ + ++RYC++LP D F + PK + T + LP N+P+
Sbjct: 616 LRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPL 675
Query: 637 H-QIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYLLPQEDNATE-----DEPMLFSSD 690
IVG P S A++ L E LHK+G L+D+L+P + D +
Sbjct: 676 RASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETS 735
Query: 691 SDSYEGEGSRGELHEMLVPAVLRQSWTKSQYPVRLNFYFMQF---IPD----------PA 737
G R + + +P LR S+ K P L M +PD P
Sbjct: 736 VPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPP 795
Query: 738 DRIYREFGLFVKSLLPGEAEHLKVDLHLARGR-SVMTKLVPSGIMQAQQFQEMFLKV--- 793
+ R FG+ +P + H V + G ++ +L SG + Q E+ ++
Sbjct: 796 EDTTRCFGILTAKPIP-QIPHFPV--YTRSGEVTISIELKKSGFTLSLQMLELITRLHQY 852
Query: 794 ----ILDRSEFNSEFVPLGKDDYCESSSSTFYLLLPVIFHKNS----VDWKIIRRCLSSP 845
IL + EF P D + Y +LP+ +S +D+K + S
Sbjct: 853 IFSHILRLEKPALEFKPTEAD--------SAYCVLPLNIVDDSSTLDIDFKFMEDIEKSE 904
Query: 846 VFGTPGGSVDRKSLPSHGPLQLHNGWSSESDVENSLVYATHKKW-----FYLVTNIVFEK 900
+ K +P L+ D +++++ ++ + FY V ++ +
Sbjct: 905 ARTGIPSTQYTKEMPFIFKLE---------DYQDAVIIPRYRNFDQPHRFY-VADVYTDL 954
Query: 901 NGYSPYKDSDSSSHVDHLISSYGIHLKHPKQPLLRAKPLFRLRNLLHNRKLED------- 953
S + + + ++ + Y + L + QPLL NLL R L
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 954 SESHELEEYFDDLP------PELCQLKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELK 1006
S + + + ++ L PELC + I S + LPSI++RL LL A EL+
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPAS--LWRKAVCLPSILYRLHCLLTAEELR 1071
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 60 RKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLIR---KPQKSICIFLAPTVA 116
RKYQ+EL + A++ N IV L TG GKT IAVLL EL++ IR +FL +
Sbjct: 45 RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSAN 104
Query: 117 LVQQQAKVIEESIGFKVRTFCG-GSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFI 175
V QQ + KV + + W +E +++VLVM + L L + ++
Sbjct: 105 QVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYL 164
Query: 176 KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMKVPRIFGMTASPVVGKGASAQAN 235
+ I LL+FDECH A +HPY +IMK D PRI G+TAS + GK A+
Sbjct: 165 SLSNINLLVFDECHLA--IQDHPYREIMK--ICEDYPSCPRILGLTASILNGKCDPAELE 220
Query: 236 LPKSINSLENLLDAKVYSVEDAEDLESFVSSPVVRVYQYGPVINDT 281
+A+ + D L+ + S P V GP + +
Sbjct: 221 EKIKKLEKILKSNAE--TATDLVVLDRYTSQPCEIVVDCGPYTDKS 264
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
++L+ALT + F+LERLE+LGD+FLK+A+ +LF + EG L+ RS V+N N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1083 LLKLAARNNLQVYIRDQPFDP 1103
L +L + L + FDP
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1227 GLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNN 1286
GL+LQA + + G +RLE LGD+ L + IT+YL+ YP G+L+ +RS V+N
Sbjct: 1296 GLILQALTLSNASD-GFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSN 1354
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 1040 ERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIRDQ 1099
+RLE LGDA L Y + +HL+ G LT RS VNN+ LA + + Y +
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK-- 1758
Query: 1100 PFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHK-----KT 1154
P F + + + Q + +++E+R S+ + K
Sbjct: 1759 AVSPELFHVI------------DDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1806
Query: 1155 IADVVEALVGAFIDDSGF 1172
+ D+ E+L GA DSG
Sbjct: 1807 MGDIFESLAGAIYMDSGM 1824
>sp|Q2VF19|DCL1_CRYPA Dicer-like protein 1 OS=Cryphonectria parasitica GN=DCL-1 PE=3 SV=1
Length = 1548
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 141/265 (53%), Gaps = 21/265 (7%)
Query: 24 TSAVVEECSVAVSGVGFGAESSVGAQKTDKDPKQIARKYQLELCKKAMEENIIVYLGTGC 83
T V++ + + + S G +K P R YQ+EL ++A ++N I L TG
Sbjct: 68 TRKAVKQSVNQDNSLAYMIRSWEGGEKIITSP----RDYQMELFERAKQQNTIAVLDTGS 123
Query: 84 GKTHIAVLLI-----YELAHLIRKPQKSICIFLAPTVALVQQQAKVIEESIGFKVRTFCG 138
GKT IA LL+ EL + + I FL VAL QQ V+E ++ V F G
Sbjct: 124 GKTLIAALLLDHTVNQELEDRAKGLPRRIAFFLVEKVALAFQQHAVLECNLAHSVAVFSG 183
Query: 139 GS-KRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHRFIKMELIALLIFDECHHAQVKSNH 197
S K + WE ++ +EV+V +IL CL + +I+++ I LL+FDE HH K NH
Sbjct: 184 ESIKNTWTKGFWETQLADHEVIVCTAEILNQCLQYAYIRIDQINLLVFDEAHH--TKKNH 241
Query: 198 PYAKIMKDFY---KPDIMKVPRIFGMTASPVVGKGASAQANLPKSINSLENLLDAKVYSV 254
PYA+I+KD+Y K +++PRIFGMTASPV A ++ ++ LE LL +++ +
Sbjct: 242 PYARIIKDYYASGKDRGLRLPRIFGMTASPV-----DALIDVRQAAIELEGLLHSRIATT 296
Query: 255 EDAEDLESFVSSPVVR-VYQYGPVI 278
D + L V P +Y+Y P++
Sbjct: 297 ADPDALRRAVGRPKKEIIYKYNPLV 321
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 77/459 (16%)
Query: 973 LKIIGFSKDIGSSLSLLPSIMHRLENLLVAIELKHLLSASFPEGAEVSAEMLLKALTTEK 1032
++I D+ + LLPSI+HR+E L+A++ LL +++ E L K +
Sbjct: 1002 MRISPLPVDVVAMAYLLPSIIHRIEQNLIALDACRLLQLDI--HPDLALEALTKDSDNQG 1059
Query: 1033 CQERF-----------------SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRS 1075
ER + ERLE+LGD+FLK A +F L DE + R
Sbjct: 1060 EDERMDSIQAFEPVNFQPGMGANYERLELLGDSFLKMATTIAVFTLIPNKDEFDYHCERM 1119
Query: 1076 NAVNNSNLLKLAARNNLQV--YIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRA 1133
+ N NL +A ++L++ YIR + F+ ++ + + + +T Q D
Sbjct: 1120 VMICNQNLFGVAKSDDLKLHEYIRSKSFERGTWYPVLK----LEFGKTHLKTLKQMD--- 1172
Query: 1134 PDDLNAEVRCSKGHHWLHKKTIADVVEALVGAFI------DDSGFKAATAFLKWIGIQ-- 1185
H L K+IADV EAL+GA DD A A + + +
Sbjct: 1173 -------------EHRLADKSIADVCEALIGAAYMTTRKHDDYDL-AVRAVTRLVNHKQH 1218
Query: 1186 --VEFEASQVTNICISSKSFLPLSASLDMAT-LEILLGHQFLHRGLLLQAFVHPS----F 1238
+++ + ++ +A LDMA + G+QF H +L AF HPS F
Sbjct: 1219 PMTKWDDYHAAYVMPGWQTMPANAAELDMAQKIHEATGYQFKHPRVLRSAFRHPSRPYVF 1278
Query: 1239 NRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSF 1298
+++ YQRLEFLGDA+ D YL+ + P P LT+ + +V+NQ +AV F
Sbjct: 1279 DKVPH-YQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGF 1337
Query: 1299 YKFLIFDSNVLSETINNYVDYMIT--------------PSSTREVK---EGPRCPKVLGD 1341
+KF++ + I+ YV + P S E P+ PK + D
Sbjct: 1338 HKFILHHHASIGSQIHEYVTEITEARRAAEDAAEAAGKPRSAYSRDYWVEAPQPPKCIPD 1397
Query: 1342 LVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
++E+ +GAI +DS ++ + V + + + P F+++++
Sbjct: 1398 VLEAYVGAIFVDSKYDYSVVQQFFHAHVLPF--FASMRM 1434
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 22/292 (7%)
Query: 402 EP-FFSKKLLRLIGILSTFRLQQHMKCIVFVNRIVTARALS-YILQNLKFLASWRCHFLV 459
EP S KL L +L + ++CIVFV R TA+ L+ + + + + L+
Sbjct: 418 EPGLLSSKLKTLSKLLEEYFTDSSIRCIVFVERRWTAKLLTDFFESHAAEIPGLKVGSLM 477
Query: 460 GVNA-GLKSMS--RNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVA 516
G NA G S + R +++IL F+ G N + AT V EEGLDI C L+IRFD+ +T+
Sbjct: 478 GANAEGGSSQTSFREQIRTILS-FKKGNTNCIFATSVAEEGLDIPDCNLIIRFDICKTMI 536
Query: 517 SFIQSRGRARMPQSEYAFLVDSGNQRELDLIKNFSKEEDRMNR----EIMDRT------S 566
+IQSRGRAR S Y L++ GN ++ ++ E + R + DR
Sbjct: 537 QYIQSRGRARQADSTYIHLIEGGNGDHRRIMHQNAENEKLLRRFCNTQPEDRLLKGSDYD 596
Query: 567 SDAFTCSE--ERIYKVDSSGACISAGYGVSLLHRYCSKL----PHDEFFNPKPKFYYFDD 620
D F E +R Y + S+GA ++ + +L + + L + E + +
Sbjct: 597 MDFFLRQERNQRQYTIKSTGARLTYKNSLPILQAFLNTLRNQDDYAEGMDLVADYSILSV 656
Query: 621 LGGTICHIILPANAPIHQIVGTPQSSMEAAKKDACLKAIEDLHKLGALNDYL 672
GG IC +++P +P+ +G S+ + AK A + L + L+D+L
Sbjct: 657 QGGFICEVMMPPLSPVTSAIGKVYSTKQVAKCSAAFELCFQLIQKKFLDDHL 708
>sp|Q8R5F7|IFIH1_MOUSE Interferon-induced helicase C domain-containing protein 1 OS=Mus
musculus GN=Ifih1 PE=1 SV=1
Length = 1025
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 266/577 (46%), Gaps = 89/577 (15%)
Query: 43 ESSVGAQKTDKDPKQIARKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIR 101
ES + ++ +P+ R YQ+E+ + A++ +NII+ L TG GKT +AV + + HL +
Sbjct: 293 ESVIQTKRVSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKD--HLDK 350
Query: 102 KPQKS---ICIFLAPTVALVQQQAKVIEESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEV 158
K Q S I L V L +Q + K G S + + + + Y+V
Sbjct: 351 KKQASESGKVIVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410
Query: 159 LVMIPQILLYCLYH------RFIKMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDI- 211
++ QIL L + +++ +L+I DECHH ++ Y IM+ + K +
Sbjct: 411 IISTAQILENSLLNLESGDDDGVQLSDFSLIIIDECHHTNKEA--VYNNIMRRYLKQKLR 468
Query: 212 -----------MKVPRIFGMTASPVVGKGASAQANLPKSI-NSLENLLDAKVYSV-EDAE 258
+ +P+I G+TASP VG A Q+ K I N NL + +V E+
Sbjct: 469 NNDLKKQNKPAIPLPQILGLTASPGVG-AAKKQSEAEKHILNICANLDAFTIKTVKENLG 527
Query: 259 DLESFVSSPVVRVYQYGPVINDTSSSYVTCSEQLAEIK-------REQYISALSRKLHDH 311
L+ + P + + +DT + E+L EI ++ +S + ++
Sbjct: 528 QLKHQIKEPCKKFV----IADDTRENPF--KEKLLEIMASIQTYCQKSPMSDFGTQHYEQ 581
Query: 312 QSLRNTTKQLNRLHDSMKFCLENLGVCGALHASYILLSGDETMRNELIEA----EGNTID 367
+++ K + + C E+L L ++T+R +I+A E D
Sbjct: 582 WAIQMEKKAAKDGNRKDRVCAEHLRKYNEA------LQINDTIR--MIDAYSHLETFYTD 633
Query: 368 DSLCRFA----SQASEVFAAICRRDGIASDLS-------CIEVLKEPFF-SKKLLRLIG- 414
+ +FA S S+ A+ C D + D+ E L FF +KK+L+ +
Sbjct: 634 EKEKKFAVLNDSDKSDDEASSCN-DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAE 692
Query: 415 ---------------ILSTF-RLQQHMKCIVFVNRIVTARALS-YILQNLKFL-ASWRCH 456
IL F R ++ + I+F + ALS +I++N KF + H
Sbjct: 693 NPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAH 752
Query: 457 FLVGV--NAGLKSMSRNAMKSILEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPET 514
L+G ++ +K M++ K ++ KFR+GE+NLL+AT V EEGLDI+ C +VIR+ L
Sbjct: 753 HLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTN 812
Query: 515 VASFIQSRGRARMPQSEYAFLVDSGNQ-RELDLIKNF 550
+ +Q+RGRAR +S Y + SG+ E +++ +F
Sbjct: 813 EIAMVQARGRARADESTYVLVTSSGSGVTEREIVNDF 849
>sp|Q6Q899|DDX58_MOUSE Probable ATP-dependent RNA helicase DDX58 OS=Mus musculus GN=Ddx58
PE=1 SV=2
Length = 926
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 149/551 (27%), Positives = 249/551 (45%), Gaps = 64/551 (11%)
Query: 60 RKYQLELCKKAME-ENIIVYLGTGCGKTHIAVLLIYELAHLIRKP--QKSICIFLAPTVA 116
R YQLEL A + +N I+ TGCGKT +++L+ HL + P QK +F A +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLLICEH--HLKKFPCGQKGKVVFFANQIP 302
Query: 117 LVQQQAKVIE---ESIGFKVRTFCGGSKRLKSHCDWEKEIDQYEVLVMIPQILLYCLYHR 173
+ +QQA V E +G+ + + G + + I+ +++++ PQIL+ L +
Sbjct: 303 VYEQQATVFSRYFERLGYNIASISGAT---SDSVSVQHIIEDNDIIILTPQILVNNLNNG 359
Query: 174 FI-KMELIALLIFDECHHAQVKSNHPYAKIMKDFYKPDIMK----VPRIFGMTASPVVGK 228
I + + L+IFDECH+ NHPY +IM + + + +P++ G+TAS VG
Sbjct: 360 AIPSLSVFTLMIFDECHN--TSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTASVGVGD 417
Query: 229 GASAQANLPKSINSLENLLDAKVYSV--EDAEDLESFVSSP--VVRVYQYGPVINDTSSS 284
+A+ + + I L LDA V + ++ +LE V P + R V + TS++
Sbjct: 418 AKTAEEAM-QHICKLCAALDASVIATVRDNVAELEQVVYKPQKISR-----KVASRTSNT 471
Query: 285 YVTCSEQLAEIKREQYISALSRKLHDHQSLRN----TTKQLNRLHDSMKFCL-------- 332
+ QL + + E+ +S +L ++N T K + K C
Sbjct: 472 FKCIISQLMK-ETEKLAKDVSEELGKLFQIQNREFGTQKYEQWIVGVHKACSVFQMADKE 530
Query: 333 ENLGVCGALHASYILLSGDETMRNELIEAEGNTIDDSLCRFASQASEVFAAI-------C 385
E VC AL ++ S + LI +E + D+L + +V A
Sbjct: 531 EESRVCKAL---FLYTSHLRKYNDALIISEDAQMTDALNYLKAFFHDVREAAFDETEREL 587
Query: 386 RRDGIASDLSCIEVLKEPFFSKKLLRLIGIL--STFRLQQHMKCIVFVNRIVTARALSYI 443
R +V ++P LR + ++ + L+ K I+FV AL
Sbjct: 588 TRRFEEKLEELEKVSRDPSNENPKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKW 647
Query: 444 LQNLKFLASWRCHFLVGVNAGLKS--MSRNAMKSILEKFR-SGELNLLVATKVGEEGLDI 500
++ L+ + L G ++ M+ A K +LE FR SG+ N+L+AT V +EG+DI
Sbjct: 648 IEENPALSFLKPGILTGRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDI 707
Query: 501 QTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGN---QRELDLIKNFSKEEDRM 557
C LVI ++ V IQ+RGR R S+ L S + + + ++IK E M
Sbjct: 708 AECNLVILYEYVGNVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIK-----EKIM 762
Query: 558 NREIMDRTSSD 568
N I+ + D
Sbjct: 763 NESILRLQTWD 773
>sp|Q69KJ0|RTL3_ORYSJ Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica
GN=Os06g0358800 PE=2 SV=1
Length = 299
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 1202 SFLPLSASLDMATLEILLGHQFLHRGLLLQAFVHPSFN---RLGGCYQRLEFLGDAVLDY 1258
F+P ++A +E LLG++F + L+ +A H SF R G Y+RLE+LGDAVL
Sbjct: 29 GFVPPMGPGEVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTC 88
Query: 1259 LITSYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVD 1318
+++ ++ Y +L+PG LT LR+ V+ + A VAV + FL + L I ++++
Sbjct: 89 VVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIE 148
Query: 1319 YM-ITPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSN 1377
+ + P + + + PKVL D+VES +GAI DS FN VW++ DP++
Sbjct: 149 ELSMYPIHSNGLLD---PPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLET 205
Query: 1378 LQLNPIRELLELCN 1391
L +P+ EL E C
Sbjct: 206 LGKHPVSELFEFCQ 219
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 24/135 (17%)
Query: 1038 SLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSNLLKLAARNNLQVYIR 1097
+ ERLE LGDA L V R +FL + + G LTR R+ V+ L ++A + L ++R
Sbjct: 74 TYERLEYLGDAVLTCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLR 133
Query: 1098 DQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVRCSKGHHWLHKKTIAD 1157
+ + L + + + IHS P K + D
Sbjct: 134 HKAPN------LDGQITDFIEELSMYPIHSNGLLDPP------------------KVLCD 169
Query: 1158 VVEALVGAFIDDSGF 1172
VVE+L+GA DS F
Sbjct: 170 VVESLIGAIYCDSNF 184
>sp|Q9LTQ0|RTL2_ARATH Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1
SV=1
Length = 391
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 68/403 (16%)
Query: 1204 LPLSASLD-MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITS 1262
+P+S+ ++ M +E +L ++F ++ LL +A H S Y+RLEF+GD+ + I++
Sbjct: 51 VPVSSEMESMEAVEKILNYKFSNKSLLKEAITHTSCTDFPS-YERLEFIGDSAIGLAISN 109
Query: 1263 YLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMIT 1322
YLY YP L+P L+ LR+ V+ + A V+++ Y FL ++ L E + + + +
Sbjct: 110 YLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSE-AVG 168
Query: 1323 PSSTREVKEGP--RCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL 1380
V G + PKVL DL ES GA+ +D F+L +W I L+PI+ +LQ
Sbjct: 169 KEDDLSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQK 228
Query: 1381 --NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFISACATNLSRKEAIR- 1437
P+ L +LC+ + + + K G +A V D ++ S A N K+ R
Sbjct: 229 QPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIA---VIYLDDELLASGRAEN---KDIARL 282
Query: 1438 IASQQLFSKLKAAGYVPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFEKLKIS 1497
IA+++ KL P+ +V +D+V
Sbjct: 283 IAAKEALRKLSEV----------------------------FPVEMVIDEDSV------- 307
Query: 1498 EPQGGSSCDIGSPSLTTGGLQNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFR 1557
+Q A+++L E+C W P + ++ K F
Sbjct: 308 ------------------EIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCS 349
Query: 1558 VIVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLEREGYL 1600
++I EK + G+ Q+K K A +A M+ L + YL
Sbjct: 350 AKIKI-TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 1023 MLLKALTTEKCQERFSLERLEILGDAFLKYAVGRHLFLLHDTVDEGELTRRRSNAVNNSN 1082
+L +A+T C + S ERLE +GD+ + A+ +L+L + +++ +L+ R+ V+
Sbjct: 76 LLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEK 135
Query: 1083 LLKLAARNNLQVYIRDQPFDPCQFFALGRRCPRICSKETERTIHSQYDGRAPDDLNAEVR 1142
L +++ + L ++R R P + K E S+ G+ DDL+
Sbjct: 136 LARVSLNHGLYSFLR-------------RNAPSLDEKVKE---FSEAVGKE-DDLS---- 174
Query: 1143 CSKGHHWLHKKTIADVVEALVGAFIDDSGFKAATAFLKWIGI 1184
S G K +AD+ E+L GA D F ++ + G+
Sbjct: 175 VSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGL 216
>sp|Q9FKF0|RTL3_ARATH Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2
SV=1
Length = 957
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 174/397 (43%), Gaps = 38/397 (9%)
Query: 1215 LEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPG 1274
+E +L + F+++ LL +A S + RLEF GD++L+ T+Y+ YP LK
Sbjct: 7 VEKILNYSFVNKTLLKEAITQKS-----PLFDRLEFFGDSILEVAFTNYICHTYPNLKVK 61
Query: 1275 QLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMITPSSTREVKEGPR 1334
+L DLR+ V+N+ FA +AV+ + + FL+ + L + + N+ + + +
Sbjct: 62 ELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDPVPYGGLVK 121
Query: 1335 CPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQLNPIRELLELCNSYD 1394
PK+L D +ES + +D +++ +W+I S L+PI +L L P L L +
Sbjct: 122 APKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTL---FR 178
Query: 1395 LDLQFPSLKKGG--KFLAEAKVTGKDKDVFISACATNLSRKEAIRIASQQLFSKLKAAGY 1452
L + S G K K+ ++KD + ++ I S +LFS +
Sbjct: 179 LADKHGSESTSGIRKMTTSTKILLRNKDCL--DVDLEDVKGKSFEICSTELFSLSTVS-- 234
Query: 1453 VPKTKSLESILKSSPKSEARLIGYDETPINVVAADDNVFE-----KLKISEPQGGSSCDI 1507
E+ L E +I D + +FE KL+I Q GSS +
Sbjct: 235 -------ENSLTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQI---QTGSSGNP 284
Query: 1508 GSPSLTTGGL---------QNRSARSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRV 1558
+ +TT + + + R L E+C N W P F +E+G + F V
Sbjct: 285 LTYEMTTKQMVVDKDSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSV 344
Query: 1559 IVEIEAPEKIIECIGEPQAKKKGAAEHAAEGMLWCLE 1595
+EI E G+ ++KKK A A M+ LE
Sbjct: 345 KIEIPNIEGTFHMKGDIKSKKKQAENSLAYHMIRALE 381
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 17/250 (6%)
Query: 1204 LPLSASLD--MATLEILLGHQFLHRGLLLQAFVHPSFNRLGGCYQRLEFLGDAVLDYLIT 1261
L S+ +D + +E +L + F+++ LL + H + +Q L F+G++ L T
Sbjct: 405 LLFSSEMDSSVEAVEKILNYSFVNKTLLKELLTHNN----SPLFQGLMFVGESALSLAFT 460
Query: 1262 SYLYSVYPKLKPGQLTDLRSMLVNNQAFANVAVDQSFYKFLIFDSNVLSETINNYVDYMI 1321
+LY YP L+P L+ LR + +A VAV + Y+ I + ++++ M
Sbjct: 461 KHLYLTYPMLEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMG 520
Query: 1322 TPSSTREVKEGPRCPKVLGDLVESSLGAILLDSGFNLNTVWKIMLSFLDPILKFSNLQL- 1380
V + PK+L +L+ GA+ +D +N+ + +I L+PI +L++
Sbjct: 521 KEDDPYRVV---KAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQ 577
Query: 1381 --NPIRELLELCNSYDLDLQFPSLKKGGKFLAEAKVTGKDKDVFI-SACATNLSRKEAIR 1437
P L L + + + F K GG A+V D+FI S CA + A
Sbjct: 578 LKQPFLMLFRLADKHGKQIDFRYSKDGGSRKNIAQVYM--DDMFIASGCAKRIDT--AKL 633
Query: 1438 IASQQLFSKL 1447
+A+++ KL
Sbjct: 634 LAAEEAIQKL 643
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 1523 RSRLYELCAANCWKPPTFDCCKEEGLSHLKLFTFRVIVEIEAPEKIIECIGEPQAKKKGA 1582
+ +L+E+CA N W P F +E G + + V +EI E G+ + KK A
Sbjct: 839 KGKLFEICAKNKWPNPIFSVEEERGQQNEQKIVCSVKIEIPNIEGTFHIKGDAKPTKKEA 898
Query: 1583 AEHAAEGMLWCLE 1595
+A+ M+ LE
Sbjct: 899 ENSSADHMIRALE 911
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 586,855,069
Number of Sequences: 539616
Number of extensions: 25162013
Number of successful extensions: 63541
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 59404
Number of HSP's gapped (non-prelim): 3224
length of query: 1601
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1470
effective length of database: 120,879,763
effective search space: 177693251610
effective search space used: 177693251610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)