BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000384
(1590 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica
GN=DCL3A PE=2 SV=1
Length = 1651
Score = 1489 bits (3856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/1656 (49%), Positives = 1051/1656 (63%), Gaps = 151/1656 (9%)
Query: 43 NFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPT 102
+F PR YQL V+EVA RRNTIA+L+TGAGKTMIAVMLIK+ + ++ K+IIFLAPT
Sbjct: 29 DFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPT 88
Query: 103 VHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKA 162
V LV QQ +VI +HTDFEVE+YYGAKGVD+W WQ++I+K V+VMTPQ+ L ALR A
Sbjct: 89 VQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRWQEQISKYQVMVMTPQVFLQALRNA 148
Query: 163 FLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMDC 222
FL LD+V ++ DECHHATGNHPYT+IMKEFYHKS++KP VFGMTASPV+RKG+SS +DC
Sbjct: 149 FLILDMVSLMIFDECHHATGNHPYTRIMKEFYHKSEHKPSVFGMTASPVIRKGISSHLDC 208
Query: 223 EGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWSKFD 282
EGQ ELE+ LD++++T+ D+ E+E VPSAKE CR+YD C DL +L V SK+D
Sbjct: 209 EGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPVCFEDLSEELGVLCSKYD 268
Query: 283 ASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEK--- 339
A +++LQ + + YKD DD K +++LS AKI YCLD++GLICA EA KIC+E+
Sbjct: 269 ALITELQNKRSDMYKDADDITKESKRRLSKSIAKICYCLDDVGLICASEATKICIERGQE 328
Query: 340 ------VLKAQEE------CEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYS 387
V+ A ++ ++ ++S F EE LH+I L + L+
Sbjct: 329 KGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEEALHLIDKRLQQGIDMLLNSESGCV 388
Query: 388 KAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHLTVAY 447
+A GYIS KL+EL+Q+F SF S C+IFV+R I A+V++R +KK+ L H TV++
Sbjct: 389 EAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVSF 448
Query: 448 LTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSS 507
LTG +SVDALTPK+QK+ L+SFR GKVNLLF TDV EEG+HVP CS VIRFDLP+T S
Sbjct: 449 LTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRS 508
Query: 508 YIQSRGRARQHNSQFILMLE--------------RSERSVTDTALSRDPEACFLKACTYV 553
Y+QSRGRARQ +SQ+ILM+E RSE S+ A SR+
Sbjct: 509 YVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLSPGFVPNE 568
Query: 554 KTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSN 613
+ Y V +TGA VT DSS+++++RYCE LP DK Y+PKP F++ ++ Y C L LP +
Sbjct: 569 EINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGYVCTLALPPS 628
Query: 614 APFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISKKNESLP 673
A Q +VGP +RN + +KQLVCL+AC+KLH++GAL+DHL SVE+P I KN+
Sbjct: 629 AVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLCLSVEDPVPE--IVSKNKG-T 685
Query: 674 GAGTTKRKELHGTTPIRALSGRW-GEKCGVILHAYKFNFACSIVTEIYSGFVLLIESELD 732
G GTTKRKELHGTT I A SG W +K + L +YK NF C +IYS FVLLI++ L
Sbjct: 686 GIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSYKMNFVCDQAGQIYSEFVLLIDATLP 745
Query: 733 NDVGNFELELYLVSKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVKSK-SS 791
++V E++LYL K VK +VSS G + LDA QM +AK FQ L FNGLFGKLF +SK +
Sbjct: 746 DEVATLEIDLYLHDKMVKTSVSSCGLLELDAQQMEQAKLFQGLLFNGLFGKLFTRSKVPN 805
Query: 792 GSREFFLKRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINWSGINPCASVVEFIK----- 846
REF L +E +W+ + +YLLLP N D + INWS I+ A+ V+ ++
Sbjct: 806 APREFILNKEDTFVWNTASVYLLLP---TNPSFDSNVCINWSVIDAAATAVKLMRRIYSE 862
Query: 847 -EKSFLGAAQCNNNGGNSSPCRTSPCKTGCHGKDVIHLANGSVDAKNLKDMVVLAIHTGR 905
++ LG + N G D+IHLAN S A +LKDMVVLA+HTG+
Sbjct: 863 NKRELLGIFDSDQNVG-----------------DLIHLANKSCKANSLKDMVVLAVHTGK 905
Query: 906 IYSIVEIVNNSSAESPFDGNTDDDS---KTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPH 962
IY+ ++I S +S FDG +D +TF YF +KYGIVL HP QPLL LK SHNPH
Sbjct: 906 IYTALDIT-ELSGDSAFDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPH 964
Query: 963 NLLVN-FNDGGGSGKGSKSGMN-TKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQR 1020
NLL + F D G + +G K VHMPPELL+ +D+P+ +++S YL P++M R
Sbjct: 965 NLLSSKFRDEGNVVENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYR 1024
Query: 1021 LESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAVSC 1080
+ESL LASQLR EI N I S LILEA+TTL C E FSMERLELLGDSVLKYAVSC
Sbjct: 1025 IESLTLASQLRSEIGYSDSN--ISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSC 1082
Query: 1081 HLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRP 1140
HLFL +P K EGQLS+ R +CN+TL+KLG +R +QGY+RD+AFDPRRW+APGQLS+RP
Sbjct: 1083 HLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRP 1142
Query: 1141 VPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGL 1200
PCEC V + EV D D +V+GK CD GHRWM SKTIADC EA+IGAYY GGGL
Sbjct: 1143 SPCECPVKS-EVVTDDIHIIDDKAIVLGKACDKGHRWMCSKTIADCVEAIIGAYYAGGGL 1201
Query: 1201 IAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEA 1260
AA+ ++KWLGI A++E L+ I AS+++Y+P+ N + +E+K+GY F+VK LL EA
Sbjct: 1202 RAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEA 1261
Query: 1261 ITHASVQEF---YCYQ-------------------------------------------- 1273
+TH S QE YCY+
Sbjct: 1262 LTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFA 1321
Query: 1274 ------NLYKHLQHCSTLLLSQITEYVK-----SFPKPGETTDSGPSMKAPKALGDLLES 1322
N + LQH S LLL QITEYV S K +D P K PK LGD++ES
Sbjct: 1322 QVAVKHNFHHFLQHSSGLLLDQITEYVNRLEGSSMDKVELLSDGLP--KGPKVLGDIVES 1379
Query: 1323 IVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGYFVKENCTLKG 1382
I GA+L+DTKL+LD VW IF+P+LSPIVTP+ LELPP RELIE C GYFV NC +G
Sbjct: 1380 IAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKHGYFVGINCRDQG 1439
Query: 1383 EMVHAELRLQLKDVLLVGEGQERSRKAAKGKAASQLLKKLEVCEKRISKGASNTGKLGDD 1442
+ V A L +QLK+VLLV +G + RK AK A+S LLK LE I K AS T +
Sbjct: 1440 DTVVATLDVQLKEVLLVRQGFSKKRKDAKAHASSLLLKDLEEKGLIIPKNASKTEQFEKH 1499
Query: 1443 CRQTT--------KEDLPEPPSCKRQKGTEAAIPAGDSCKKAYCMTVGTPVVAPINMKKG 1494
C T D P K + A DS + +G P+ + KG
Sbjct: 1500 CGSTNPFNNLHVDAMDTQTPKPTKEKN-------AADS-RNISDPLLGKPLHVIVKTSKG 1551
Query: 1495 GPRTSLFQLCKTMLWPMPTFETTESKSRTLLVFCE----GLEKRTGFS-SFVSKITLHIP 1549
GPR +L++LCK + WPMPT E +E + C +K T + +F S ITLHIP
Sbjct: 1552 GPRIALYELCKKLQWPMPTME-SEKVQPSFSSVCSSPGGSSQKATPQAFAFASTITLHIP 1610
Query: 1550 EFGNVECNGDPRADKKSSFDSAALIMLHELERQGKI 1585
+ GD RADKKSS DSAAL +L+EL+R+G +
Sbjct: 1611 NADVISLTGDGRADKKSSQDSAALFLLYELQRRGTL 1646
>sp|Q9LXW7|DCL3_ARATH Endoribonuclease Dicer homolog 3 OS=Arabidopsis thaliana GN=DCL3 PE=1
SV=2
Length = 1580
Score = 1481 bits (3834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 816/1653 (49%), Positives = 1054/1653 (63%), Gaps = 162/1653 (9%)
Query: 6 NSLKRSFGEVHSPNPPDMGSSGHDHAVDGPSSSTNSINFIPRIYQLKVFEVAKRRNTIAV 65
NSLKR F E+ D SS +G Y+LKV+EVAK RN IAV
Sbjct: 17 NSLKRKFSEIDGDQNLDSVSSPMMTDSNGS-------------YELKVYEVAKNRNIIAV 63
Query: 66 LETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLVHQQYDVIRVHTDFEVEEYY 125
L TG K+ I LIK + S+ K+LIIFLAPTV+LV QQ IR + +VEEY+
Sbjct: 64 LGTGIDKSEITKRLIKAMGS---SDTDKRLIIFLAPTVNLVKQQCCEIRALVNLKVEEYF 120
Query: 126 GAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFLSLDIVCFIVIDECHHATGNHP 185
GAKGVD+W SQ W +E +K+DVLVMTPQILLD LR AFL L++VC ++IDECHH TGNHP
Sbjct: 121 GAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEMVCLLIIDECHHTTGNHP 180
Query: 186 YTKIMKEFYHKSDNKPKVFGMTASPVVRKG-VSSAMDCEGQISELESTLDSQVFTIEDKT 244
Y K+MKEFYH+S +KPK+FG+TAS V+RKG VSS + Q+SELE +DS++F E++
Sbjct: 181 YAKLMKEFYHESTSKPKIFGLTASAVIRKGIVSSPSNYAAQVSELERLMDSKIFNPEERE 240
Query: 245 EMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWSKFDASLSKLQGSQLNCYKDMDDKHK 304
+E F + KE Y+ S C +LK KLE S KFDASL +LQ + + +MD+K +
Sbjct: 241 GVEKFATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLRRLQELGKDSFLNMDNKFE 300
Query: 305 TLRKQLSDYHAKILYCLDELGLICAYEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEV 364
T +K+LS + +IL+CLD LGLICA+ A ++CLEK+ +EE E Y++ S+ CK FLE++
Sbjct: 301 TYQKRLSIDYREILHCLDNLGLICAHLAAEVCLEKISDTKEESETYKECSMVCKEFLEDI 360
Query: 365 LHVIGSALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERI 424
L IG LP DK +D ++ AV G++S KL EL L SF Q C+I VERI
Sbjct: 361 LSTIGVYLPQDDKSLVDLQQNHLSAVISGHVSPKLKELFHLLDSFRGDKQKQCLILVERI 420
Query: 425 IAAKVVERFVKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVI 484
I AKV+ERFVKK L +L V YLT + S + K+Q E+ + F+ GKVNLLF TDV+
Sbjct: 421 ITAKVIERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLLFITDVV 480
Query: 485 EEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTD--------T 536
EEG VP+CS ++ FDLPKT+ SY QS+ A+Q NS+ I+ LER D
Sbjct: 481 EEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGNPKQRDHLHDLMRRE 540
Query: 537 ALSRDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFK 596
L +DPEA LK+C + V+ G+ V DS++ +
Sbjct: 541 VLIQDPEAPNLKSCPPPVKNGHGVKEIGSMVIPDSNITV--------------------- 579
Query: 597 YKSAEEAYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSV 656
+EEA A QT+ P SRN+ L C+KL L+++LL S
Sbjct: 580 ---SEEA----------ASTQTMSDPPSRNEQLP-------PCKKLR----LDNNLLQS- 614
Query: 657 EEPSENNLISKKNESLPGAGTTKRKELHGTTPIRALSGRWGEKC-GVILHAYKFNFACSI 715
E SK S AG+ KRKELHGTT ALSG WGE G AYKF+F C+I
Sbjct: 615 -NGKEKVASSKSKSSSSAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCNI 673
Query: 716 VTEIYSGFVLLIESELDNDVGNFELELYLVSKTVKATVSSSGQVHLDADQMSKAKCFQEL 775
E+YS F LL+ES L DVG E++LYLV K VKA+VS GQ+ L +++ KAK FQ+
Sbjct: 674 SGEVYSSFSLLLESTLAEDVGKVEMDLYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQF 733
Query: 776 FFNGLFGKLFVKSKSSGS-REFFLKRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINWSG 834
FFNG+FGKLFV SKS G+ REF L+ +T+SLW P++M+LLLP+E N S I+WS
Sbjct: 734 FFNGMFGKLFVGSKSQGTKREFLLQTDTSSLWHPAFMFLLLPVE-TNDLA-SSATIDWSA 791
Query: 835 INPCASVVEFIKEKSFLGAAQCNNNGGNSSPCRTSPCKTGCHGKDVIHLANGSVDAKNLK 894
IN CAS+VEF+K+ S L + N N+S + ++IH AN S D +L+
Sbjct: 792 INSCASIVEFLKKNSLLDLRDSDGNQCNTSSGQEVLLDDKMEETNLIHFANASSDKNSLE 851
Query: 895 DMVVLAIHTGRIYSIVEIVNNSSAESPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLR 954
++VV+AIHTGRIYSIVE V++SSA SPF+ + T+ YF++KYGIVL HP QPL++
Sbjct: 852 ELVVIAIHTGRIYSIVEAVSDSSAMSPFEVDASSGYATYAEYFNKKYGIVLAHPNQPLMK 911
Query: 955 LKQSHNPHNLLVNFNDGGGSGKGSKSG-MNTKKPQMHVHMPPELLVRVDVPISVVKSLYL 1013
LKQSH+ HNLLV+FN+ K+G + +KP +H H+PPELL R+DVP +V+KS+YL
Sbjct: 912 LKQSHHAHNLLVDFNEEMVVKTEPKAGNVRKRKPNIHAHLPPELLARIDVPRAVLKSIYL 971
Query: 1014 LPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSV 1073
LPSVM RLESLMLASQLREEI+C NF I S+ ILEA+TTL C ESFSMERLELLGDSV
Sbjct: 972 LPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSV 1031
Query: 1074 LKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAP 1133
LKY SCHLFL YP K EGQLS +R + NS LH+L T RKLQGYIR+ AF+PRRW AP
Sbjct: 1032 LKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAP 1091
Query: 1134 GQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGA 1193
GQ SL PVPC+CG+DT EVPLD KFFT++ + +GK CDMGHRW+ SK+++DCAEALIGA
Sbjct: 1092 GQFSLFPVPCKCGIDTREVPLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGA 1151
Query: 1194 YYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTV 1253
YYV GGL A+L+MMKWLGID D + +LV + I R SLR Y+P+ +E+ ++E KI +EF+
Sbjct: 1152 YYVSGGLSASLHMMKWLGIDVDFDPNLVVEAINRVSLRCYIPKEDELIELERKIQHEFSA 1211
Query: 1254 KFLLQEAITHASVQEFYCYQ---------------------------------------- 1273
KFLL+EAITH+S++E Y Y+
Sbjct: 1212 KFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNN 1271
Query: 1274 ----------NLYKHLQHCSTLLLSQITEYVKSFPKPGETTDSGPSMKAPKALGDLLESI 1323
NL+ HLQ C+T+L +QI +Y+ SF KP ET S PS++ PKALGD++ESI
Sbjct: 1272 ENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQGPKALGDVVESI 1331
Query: 1324 VGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGYFVKENCTLKGE 1383
GA+LIDT+L+LD+VWR+F+P+LSP+VTPDKL+LPP REL ELCDSLGYF + C+ G
Sbjct: 1332 AGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGV 1391
Query: 1384 MVHAELRLQLKDVLLVGEGQERSRKAAKGKAASQLLKKLEVCEKRISKGASNTGKLGDD- 1442
A ++LQL DVLL G+G E++ K A GKAAS LL +LE ++ IS+ S LGD+
Sbjct: 1392 KAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLE--KRNISRKTS----LGDNQ 1445
Query: 1443 --------CRQTTKEDLPEPPSCKRQKGTEAAIPAGDSCKKAYCMTVGTPVVAPINMKKG 1494
C + +E L + + ++ P + PINMKKG
Sbjct: 1446 SSMDVNLACNHSDRETL--------------------TSETTEIQSIVIPFIGPINMKKG 1485
Query: 1495 GPRTSLFQLCKTMLWPMPTFETTESKSRTLLVFCEGLEKRTGFSSFVSKITLHIPEFGNV 1554
GPR +L + CK LWPMPTF+T+E KSRT F +G EKRT FSSF S ITL IP V
Sbjct: 1486 GPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGGEKRTSFSSFTSTITLRIPNREAV 1545
Query: 1555 ECNGDPRADKKSSFDSAALIMLHELERQGKIII 1587
G+ R DKKSSFDSA + +L+ELER+ +II
Sbjct: 1546 MYAGEARPDKKSSFDSAVVELLYELERRKIVII 1578
>sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica
GN=DCL3B PE=2 SV=2
Length = 1637
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 769/1631 (47%), Positives = 1037/1631 (63%), Gaps = 114/1631 (6%)
Query: 35 PSSSTNSINFIPRIYQL-KVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSN-GF 92
P S + + PR QL +VFE A R NTIAVL+TG+GKTM+AVML ++ A+ +++
Sbjct: 27 PRGSRPTADTTPRTSQLVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAP 86
Query: 93 KKLIIFLAPTVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTP 152
+++++FLAPTVHLVHQQ++VIR +TD +V GA V EW + W++E+ +N+++VMTP
Sbjct: 87 RRIVVFLAPTVHLVHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTP 146
Query: 153 QILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVV 212
QILLDALR AFL++ V ++ DECH A G+HPY +IMKEFY S +P VFGMTASPV
Sbjct: 147 QILLDALRHAFLTMSAVSLLIFDECHRACGSHPYARIMKEFYFGSQWRPDVFGMTASPVA 206
Query: 213 RKGVSSAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKG 272
KG S+ +CE IS+LE TLD++++ +ED+ E+E F P ++YD +LK
Sbjct: 207 TKGASTLHNCEAHISQLELTLDAKIYIVEDRNELESFSPPTTIVNKYYDAYMVDFDNLKS 266
Query: 273 KLEVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEA 332
KL++ +FD+ L LQ S N +KD D+ +T RK LS YH KILY L++LG I E
Sbjct: 267 KLQIFSDEFDSLLVGLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLGPIITSEV 326
Query: 333 VKICLEKV--LKAQEECEIYRQSSL--QCKYFLEEVLHVIGSALPLADKIFLDFGFDYSK 388
VKI +E V L E+C I+ ++SL YF +E L +I LP + +
Sbjct: 327 VKIHIESVKPLCDSEDC-IFSKASLCLHMSYF-KEALSLIEEILPQGYGELMKSESGSEE 384
Query: 389 AVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHLTVAYL 448
GYIS+K++ L+ +F SFG S +VLC+IFV+RII AK VERF++ + + +++YL
Sbjct: 385 LTKRGYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYL 444
Query: 449 TGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSY 508
TG +TS DAL+P VQ+ L+ FR GKVNLLF TDV EEG+ VPNCS VIRFDLP+TV SY
Sbjct: 445 TGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSY 504
Query: 509 IQSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFLKACTYVK-------------T 555
+QSRGRAR++NS+FILM+ER + ++K C +
Sbjct: 505 VQSRGRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQGM 564
Query: 556 KSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSNAP 615
+Y V+STGA++T D VNLI +YCE LP D+Y+ PKP F+ + ++C LTLP NA
Sbjct: 565 YTYQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAA 624
Query: 616 FQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGA 675
FQ+IVGP S + NLSKQLV LEAC+KLHQ+G LNDHL+P EEP + + + + + G
Sbjct: 625 FQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKCISGP 684
Query: 676 GTTKRKELHGTTPIRALSGRW-GEKCGVILHAYKFNFACSIVTEIYSGFVLLIESELDND 734
GTTKRKELHGTT + ALSG W + + L+ Y+ +F C E Y+GFVLL+E ELD+D
Sbjct: 685 GTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDDD 744
Query: 735 VGNFELELYLV-SKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVKSKSSGS 793
V +++L+L+ +K V TV+ G+V L+ Q+ K K FQE FFNG+FG+LF S+ SG+
Sbjct: 745 VAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGA 804
Query: 794 -REFFLKRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINWSGINPCASVVEFIKEKSFLG 852
R+F K+ W+ MYLLLPL + D I+W I CA VE + S+ G
Sbjct: 805 QRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQD-DLSIHWEAIESCAGAVEQLW-SSYQG 862
Query: 853 AAQCNNNGGNSSPCRTSPCKTGCHGKDVIHLANGSVDAKNLKDMVVLAIHTGRIYSIVEI 912
N P P K +++IHLAN S+ ++KD VVL++HTGRIY+++++
Sbjct: 863 DE-------NVIPVNCIPQKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDL 915
Query: 913 VNNSSAESPFDGNTDDDSK---TFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLL---V 966
+ +++AE FD + +FV+Y+ +KYGI++ HP QPLL LKQSHN HNLL +
Sbjct: 916 ILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKL 975
Query: 967 NFNDGGGSGKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLML 1026
+ DG +GK + +K Q+H +PPELL+ +DV ++KS YLLPSV+ RL+SLML
Sbjct: 976 KYLDGS-TGKP----LLMEKEQIHARVPPELLIHLDVTTDILKSFYLLPSVIHRLQSLML 1030
Query: 1027 ASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTY 1086
ASQLR EI N HIP +LILEA+TTL CCE+FS+ERLELLGDSVLKY V C LFL Y
Sbjct: 1031 ASQLRREIG---YNQHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRY 1087
Query: 1087 PKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECG 1146
P KHEGQLS RS AVCN+TLHK G R LQGY+RD+AFDPRRWVAPGQ+SLRP PC CG
Sbjct: 1088 PMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCG 1147
Query: 1147 VDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYM 1206
++T VP ++ D VGKPCD GHRWM SKTI+DC EAL+GAYYVGGG+ AAL++
Sbjct: 1148 IETAFVPSHRRYIRDDPSFFVGKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWV 1207
Query: 1207 MKWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASV 1266
M+W GID ++ L+ + AS + +IN+I+++E+K+ Y F+VK LL EAITH S+
Sbjct: 1208 MRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSL 1267
Query: 1267 QEF---YCYQ-------------------------------------------------- 1273
QE YCYQ
Sbjct: 1268 QELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRN 1327
Query: 1274 NLYKHLQHCSTLLLSQITEYVKS-FPKPGETTD--SGPSMKAPKALGDLLESIVGAVLID 1330
N++ HLQH S +LL QITEYV+S G+ ++ + K PK LGD++ESI GAV ID
Sbjct: 1328 NIHSHLQHGSGILLEQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFID 1387
Query: 1331 TKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGYFVKENCTLKGEMVHAELR 1390
T N+D VW IF+P+LSP++TPDKL LPP REL+ELC +G F+ CT KGE V E+
Sbjct: 1388 TDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMS 1447
Query: 1391 LQLKDVLLVGEGQERSRKAAKGKAASQLLKKLEVCEKRISKGASNTGKLGDDCRQTTKED 1450
LQL+D LLV +G +R++K AK KAAS++L L+ I + S +L D + D
Sbjct: 1448 LQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQGLSIKQCLSKAKQL-DIVTSDLQFD 1506
Query: 1451 LPEPPSCKRQKGTEAAIP-AGDSCKKAYCMTVGTPVVAPINMKKGGPRTSLFQLCKTMLW 1509
L GT+ + D +V VV P+ M+KGGPR++LF+LCK + W
Sbjct: 1507 LT-------SSGTQLSYSDLNDYHILEGLSSVKKEVVLPLKMEKGGPRSALFKLCKILQW 1559
Query: 1510 PMPTFETTESKSRTLLVFCEGLEKRTGFSSFVSKITLHIPEFGNVECNGDPRADKKSSFD 1569
PMP FE E + RT +V +G T F+SFVS ITLHIP+ + G+ R DKKS+ D
Sbjct: 1560 PMPEFEFVEQRFRTPIVM-DG-ATTTNFNSFVSTITLHIPDATTITFQGERRTDKKSAQD 1617
Query: 1570 SAALIMLHELE 1580
SA+L+MLH+L+
Sbjct: 1618 SASLMMLHKLQ 1628
>sp|Q8LMR2|DCL1_ORYSJ Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica
GN=DCL1 PE=3 SV=1
Length = 1883
Score = 627 bits (1616), Expect = e-178, Method: Compositional matrix adjust.
Identities = 511/1743 (29%), Positives = 778/1743 (44%), Gaps = 346/1743 (19%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLV 106
R YQL+V E AK RNTIA LETGAGKT+IAV+LIK + + K L +FL P V LV
Sbjct: 268 RQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLVPKVPLV 327
Query: 107 HQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFLSL 166
+Q VLVMT QILL+ LR + + +
Sbjct: 328 YQ--------------------------------------VLVMTAQILLNILRHSIIKM 349
Query: 167 DIVCFIVIDECHHATGNHPYTKIMKEFYHKS--DNKPKVFGMTASPVVRKGVSSAMDCEG 224
D + +++DECHHA HPY+ +M EFYH + + +P VFGMTASPV KGV+S DC
Sbjct: 350 DAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAI 409
Query: 225 QISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGS--DLKGKLEVSWSKFD 282
+I LES LDS V TI+D+ E+E VP E YD++ S + ++E + +
Sbjct: 410 KIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMESTVEEAA 469
Query: 283 ASLSKLQGSQLNCYKDMDDK------HKTLRKQLSDYHAKIL-------YCLDELGLICA 329
S SK Q +D + + + SD A ++ Y L ELG CA
Sbjct: 470 LSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 529
Query: 330 YEAVK---ICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVI------GSALP------- 373
Y+ + L+ +A + ++ Q S +L++V+ ++ G+A+
Sbjct: 530 YKVAQSFLTALQNDERANYQVDVKFQES-----YLKKVVDLLHCQLTEGAAMKSETSDVE 584
Query: 374 ----------------LADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLC 417
L D AV G ++ ++ L+++ L + +
Sbjct: 585 MQNTEKHNTNDLEEGELPDSHGEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTEDFRA 644
Query: 418 IIFVERIIAAKVVERFVKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNL 477
IIFVER++ A V+ + + ++P L+ + A L G + + ++Q + + FR G+V L
Sbjct: 645 IIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNNQEMRACQMQ-DTISKFRDGRVTL 703
Query: 478 LFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLER--------- 528
L AT V EEG+ + C+ VIRFDL KTV +YIQSRGRAR+ S +ILMLER
Sbjct: 704 LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNISHETFL 763
Query: 529 -----SERSVTDTALSRDPEA-----CFLKACTYVKTKSYIVESTGASVTTDSSVNLIHR 578
SE ++ A+ R + L Y VESTGA V+ +S+V LIH
Sbjct: 764 RNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVESTGAVVSLNSAVGLIHF 823
Query: 579 YCEMLPSDKYYTPKPIFKYKSAEEA-----YECELTLPSNAPFQTIVGPTSRNKNLSKQL 633
YC LPSD+Y P F + E+ Y C+L LP NAPF+ + GP + L++Q
Sbjct: 824 YCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIRLAQQA 883
Query: 634 VCLEACEKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGAGTTKRKELH--GTTPIRA 691
VCL AC+KLH++GA D LLP E + +E P GT + +E + G I
Sbjct: 884 VCLAACKKLHEMGAFTDTLLPD-RGSGEGEKTEQNDEGEPLPGTARHREFYPEGVADILR 942
Query: 692 ----LSGRWGEKCGVILHAYKFNFAC--------SIVTEIYSGFVLLIESELDNDVGNFE 739
LSGR G + + Y ++ C VT++ S F ++ +ELD +V +
Sbjct: 943 GEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQL-SNFAIIFGNELDAEVLSTT 1001
Query: 740 LELYLVSKTV-KATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVKSKSSGSREFFL 798
++L++ + KA++ G++ + Q+ K F + + L V S
Sbjct: 1002 MDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIV---LDVDVDPS------- 1051
Query: 799 KRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINWSGINPCASV------VEFIKEKSFLG 852
+ W P+ YL +P+ D I+W+ +N + ++ + +LG
Sbjct: 1052 ----TTPWDPAKAYLFVPVG-AEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYLG 1106
Query: 853 AAQCNNNGGNSS--------------------------------------PCRTSPCKTG 874
+ G P R +
Sbjct: 1107 TNERTLGGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARDRGHFSD 1166
Query: 875 CHGKDVIHLANGSVDAKNLKDMVVLAIHTGRIYSIVEIVNNSSAESPFDGNTDD----DS 930
+ + +A+ +AK+L MVV A H+G+ + + I N +AE+ F +
Sbjct: 1167 YQNQGKLFMADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEY 1226
Query: 931 KTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLVNFNDGGGSGKGSKSGMNTKKPQMH 990
++ +Y+ +KYG+ LI+ QPL+R + NLL + + +G S K +
Sbjct: 1227 SSYADYYKQKYGVELIYRKQPLIRARGVSYCKNLLSPRFEHSDAREGDFSENLDKT--YY 1284
Query: 991 VHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILE 1050
V++PPEL + +P S+V+ LPS+M+R+ES++LA QL++ I+ + +P++ ILE
Sbjct: 1285 VYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDIID-----YPVPATKILE 1339
Query: 1051 ALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKL 1110
ALT C E+ ER ELLGD+ LK+ VS LFL YP+KHEGQL+ R V N L++
Sbjct: 1340 ALTAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQY 1399
Query: 1111 GTDRKLQGYIRDSAFDPRRWVAPGQLSL---------------RPVPCECGVDTLEVPLD 1155
++ LQ YI+ F P RW APG L + CE ++ + D
Sbjct: 1400 ALNKTLQSYIQADRFAPSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQKESYDDYAD 1459
Query: 1156 GKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDAD 1215
+D ++ C +R + SKT+AD EALIG YYV GG IAA ++MKW+GI A+
Sbjct: 1460 N--MQEDGEIEGDSSC---YRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAE 1514
Query: 1216 LEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQE--FYCYQ 1273
L+ + S + IN ++ +G EF K LL EAITHAS CYQ
Sbjct: 1515 LDPEEIPPPKPYDIPESIMRSIN-FDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQ 1573
Query: 1274 N--------------------------------------------------LYKHLQHCS 1283
L+ HL+H S
Sbjct: 1574 RLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1633
Query: 1284 TLLLSQITEYVKSFP----KPGETTDSGPSMKAPKALGDLLESIVGAVLIDTKLNLDEVW 1339
+ L +QI E+VK KPG + KAPK LGD++ESI GA+ +D+ + VW
Sbjct: 1634 SALETQIREFVKDVQEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVW 1693
Query: 1340 RIFKPILSPIVTPDKLELPPLRELIELCDSLGYFVKENCTLKGEMVHAELRLQLKDVLLV 1399
++F+P+L P+VTP+ L + P+REL E C ++ + G + E+ D + +
Sbjct: 1694 KVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRAGNIATVEV---FVDGVQI 1750
Query: 1400 GEGQERSRKAAKGKAASQLLKKLEVCEKRISKGASNTGKLGDDCRQTTKEDLPEPPSCKR 1459
G Q +K A+ AA L L+ E K G+ + + T++
Sbjct: 1751 GVAQNPQKKMAQKLAARNALVVLKEKETATKKEDERDGEKKNGAQMFTRQ---------- 1800
Query: 1460 QKGTEAAIPAGDSCKKAYCMTVGTPVVAPINMKKGGPRTSLFQLCKTMLWPMPTFETTES 1519
+L +C WPMP +
Sbjct: 1801 ---------------------------------------TLNDICLRRQWPMPQYR---- 1817
Query: 1520 KSRTLLVFCEGLEKRTGFSSFVSKITLHIPEFG-NVECNGDPRADKKSSFDSAALIMLHE 1578
C FV + ++ + G EC G+P K + DSAA+++L
Sbjct: 1818 --------CVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLEL 1869
Query: 1579 LER 1581
L R
Sbjct: 1870 LNR 1872
>sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2
Length = 1702
Score = 603 bits (1556), Expect = e-171, Method: Compositional matrix adjust.
Identities = 488/1678 (29%), Positives = 770/1678 (45%), Gaps = 276/1678 (16%)
Query: 45 IPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVH 104
I R YQ+++ + A N I L TG GKT IAVMLI ++ + S K + IFLAPTV
Sbjct: 123 IARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYELGHLVLSPK-KSVCIFLAPTVA 181
Query: 105 LVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFL 164
LV QQ VI +F+V + G K + + S+ W++EI N+VLVMTPQILL L+ F+
Sbjct: 182 LVEQQAKVIADSVNFKVAIHCGGKRIVKSHSE-WEREIAANEVLVMTPQILLHNLQHCFI 240
Query: 165 SLDIVCFIVIDECHHAT--GNHPYTKIMKEFYH-KSDNKPKVFGMTASPVVRKGVSSAMD 221
++ + ++ DECHHA NHPY +IMK FY +S +P++FGMTASPVV KG + +
Sbjct: 241 KMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPRIFGMTASPVVGKGSFQSEN 300
Query: 222 CEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWSKF 281
I+ LE+ L+++V+++E +++ FV S +Y + S S ++
Sbjct: 301 LSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDASQ-------STIRY 353
Query: 282 DASLSKLQGSQLNCYKDMDDKHKT-----LRKQLSDYHAKILYCLDELGLICAYEAVKIC 336
+ L ++ L K + D H+T +++ L H ++Y L LGL A +A KI
Sbjct: 354 ENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKIQ 413
Query: 337 LEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALP----LADKIFLDFGFDYSKAVDL 392
L Q+E S C +L + S + +D + L A+
Sbjct: 414 LNSDHNVQDEPVGKNPKSKICDTYLSMAAEALSSGVAKDENASDLLSL-------AALKE 466
Query: 393 GYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHLTVAYLTGST 452
S KL +L+++ F + CIIFV RI+ A+ + + + L +L G +
Sbjct: 467 PLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLS 526
Query: 453 TSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSR 512
+ + +++ + + +L+ F+ ++NLL AT V EEG+ + C VIR+DLP+TV+S+IQSR
Sbjct: 527 SGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSR 586
Query: 513 GRARQHNSQFILML----ERSERSVTDTALSRDPEACFL------KACTYVKTKSYIVES 562
GRAR S++ ++ E+ + + ++ D + + C + + Y V
Sbjct: 587 GRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRLDEELYKVHE 646
Query: 563 TGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEE--AYECELTLPSNAPFQTIV 620
TGA ++ SS++L+++YC LP D+++ PKP F++K +E C +TLP+NAP I
Sbjct: 647 TGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLPANAPISEIE 706
Query: 621 GPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISKK--NESLPGAGTT 678
+ +K+ CL+A +LH +G LND LLP ++ E+ L + +++ G G +
Sbjct: 707 SSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEGCS 766
Query: 679 KRKELHGTTPIRALSGRWGEKCGVI-LHAYKFNFACSIVTEIYSGFVLLIESELDNDVGN 737
+ P+ +W + LH+Y F IY F ++S L +
Sbjct: 767 RGDLYEMRVPV-LFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKSPLPVEAET 825
Query: 738 FELELYLV-SKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLF--GKL---FVKSKSS 791
+++L+L ++V + SG D D++ A+ FQE+ LF G+L FV
Sbjct: 826 MDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIPDFVP---- 881
Query: 792 GSREFFLKRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINWSGINPCASVVEFIKEKSFL 851
L+ + +S S S YLLLPL + + G+ ++W I C
Sbjct: 882 ------LELQDSSRTSKSTFYLLLPLCLHD--GESVISVDWVTIRNCL------------ 921
Query: 852 GAAQCNNNGGNSSPCRTSPC--------KTGCHGKDVIHLANGSVDAKNLKDMVVLAIHT 903
SSP +P +G H K LANG + ++K+ +V ++
Sbjct: 922 -----------SSPIFKTPSVLVEDIFPPSGSHLK----LANGCWNIDDVKNSLVFTTYS 966
Query: 904 GRIYSIVEIVNNSSAESPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHN 963
+ Y + +I + + SP + +K+ V + YG+ L HP QPLLR+K + N
Sbjct: 967 KQFYFVADICHGRNGFSPV---KESSTKSHVESIYKLYGVELKHPAQPLLRVKPLCHVRN 1023
Query: 964 LLVNFNDGGGSGKGSKSGMNTK-KPQ----MHVHMPPEL--LVRVDVPISVVKSLYLLPS 1016
LL N M T +PQ + +PPEL L + + SL LLPS
Sbjct: 1024 LLHN-------------RMQTNLEPQELDEYFIEIPPELSHLKIKGLSKDIGSSLSLLPS 1070
Query: 1017 VMQRLESLMLASQLREEINCHSRNF-HIPSSLILEALTTLGCCESFSMERLELLGDSVLK 1075
+M R+E+L++A +L+ ++ + +LEALTT C E S+ERLE+LGD+ LK
Sbjct: 1071 IMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLSLERLEVLGDAFLK 1130
Query: 1076 YAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQ 1135
+AVS HLFL + EG+L+ RRS V NS L +L + LQ YIRD A DP ++ A G
Sbjct: 1131 FAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRDQALDPTQFFAFGH 1190
Query: 1136 LSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKP----CDMGHRWMGSKTIADCAEALI 1191
PC D + + +D ++ C GH W+ KTIAD EAL+
Sbjct: 1191 ------PCRVTCDEV-ASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALV 1243
Query: 1192 GAYYVGGGLIAALYMMKWLGIDADLE-VSLVDDCITRASLRSYVPRI--NEIKDIESKIG 1248
GA+ V G A+ +KW+G++ D E + + D CI R Y+P N ++ +E+++
Sbjct: 1244 GAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIAS---RRYLPLTTRNNLETLENQLD 1300
Query: 1249 YEFTVKFLLQEAITHASVQEF--YCYQNL------------------------------- 1275
Y+F K LL +A H S CYQ L
Sbjct: 1301 YKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDL 1360
Query: 1276 ------------------YKHLQHCSTLLLSQITEYVKSF--PKPGETTDS-GPSMKAPK 1314
K C ++ L ++ E +F P + S GP + PK
Sbjct: 1361 RSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGP--RCPK 1418
Query: 1315 ALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGYFV 1374
LGDL+ES +GA+ +D NL+ VW + L P+ L++ P++ELIELC S +
Sbjct: 1419 VLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDR 1478
Query: 1375 KENCTLKGEMVHAELRLQLKDVLLVGEGQERSRKAAKGKAASQLLKKLEV---------C 1425
+ + T K EL++ L R+++ KAA ++ L+
Sbjct: 1479 EISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHPL 1538
Query: 1426 EKRISKGASNTGKL----------------------------GDDCRQTT---KEDLPEP 1454
E + G N KL G+ R ++ + LP+
Sbjct: 1539 EDVLKNGIRNEAKLIGYNEDPIDVVDLVGLDVENLNILETFGGNSERSSSYVIRRGLPQA 1598
Query: 1455 PSCKRQKGTEAAIPAGDSCKKAYCMTVGTPVVAPINMKKGGP-----RTSLFQLCKTMLW 1509
PS + + AI +K GGP ++ L + C W
Sbjct: 1599 PSKTEDRLPQKAI-----------------------IKAGGPSSKTAKSLLHETCVANCW 1635
Query: 1510 PMPTFETTESKSRTLLVFCEGLEKRTGFSSFVSKITLHIPEFGN--VECNGDPRADKK 1565
P FE E E SFV K+ L + + N +EC G+ RA KK
Sbjct: 1636 KPPHFECCEE------------EGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKK 1681
>sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica
GN=DCL4 PE=2 SV=1
Length = 1657
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 475/1512 (31%), Positives = 705/1512 (46%), Gaps = 198/1512 (13%)
Query: 34 GPSSSTN---SINFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSN 90
GPSS+ I R YQL + + A N I L TG GKT IAV+LI ++ I+
Sbjct: 15 GPSSTRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKP 74
Query: 91 GFKKLIIFLAPTVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVM 150
+++ IFLAPT+ LV QQ VI TDF+V+ YYG G + D Q W+ ++ + +VLVM
Sbjct: 75 S-REVCIFLAPTIPLVRQQAVVIASSTDFKVQCYYG-NGKNSRDHQEWENDMREFEVLVM 132
Query: 151 TPQILLDALRKAFLSLDIVCFIVIDECHHAT--GNHPYTKIMKEFYHKS--DNKPKVFGM 206
TPQILL +LR F+ ++ + +++DECHHA HPY +IMKEFY+ + + P+VFGM
Sbjct: 133 TPQILLQSLRHCFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGM 192
Query: 207 TASPVVRKGV--------------------------SSAMDCEGQISELESTLDSQVFTI 240
TASP++ KGV S+ ++ I+ LE L ++V ++
Sbjct: 193 TASPIIGKGVMPSHSFTEKGGRSPCQPLIFFLPKGGSNKLNYTKCINSLEELLHAKVCSV 252
Query: 241 EDKTEMEVFVPSAKESCRFY------DQSKFCGSDLKGKLEVSWSKFDASLSKLQGSQLN 294
D E+E V S FY + + C +L S ASL
Sbjct: 253 -DNEELESVVASPDMEVYFYGPVNHSNLTTICIKELDSLKLQSERMLRASLC-------- 303
Query: 295 CYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEKVLKAQEECEIYRQSS 354
D D K L K L H I++CL ELG A +A + L + E+ S
Sbjct: 304 ---DFKDSQKKL-KSLWRLHENIIFCLQELGSFGALQAARTFLSFDGDKLDRREVDLNGS 359
Query: 355 LQCKYFLEEVLHVIGSALPLADKIFLDFG-FDYSKAVDLGYISTKLHELLQLFLSFGKST 413
F L+ S L G FD K ++ + S K L+ + +G
Sbjct: 360 TSS--FAHHYLNGATSILSRNKTDGSHAGSFDLEK-LEEPFFSNKFSVLINVLSRYGLQE 416
Query: 414 QVLCIIFVERIIAAKVVERFVKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGG 473
+ CI+FV+RI A+ + ++ + L +L G + ++ +++ F G
Sbjct: 417 NMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSSG 476
Query: 474 KVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERS- 532
+VNLL AT V EEG+ + C V+RFDLP+TV+S+IQSRGRAR S+++++LER +S
Sbjct: 477 EVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLERENQSH 536
Query: 533 ----------------VTDTALSRDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLI 576
D+ S D C ++ Y V++TGAS++T SV+L+
Sbjct: 537 EKLLNGYIAGESIMNEEIDSRTSNDMFDC-------LEENIYQVDNTGASISTACSVSLL 589
Query: 577 HRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCL 636
H YC+ LP D ++TP P+F Y E C L LP NA F+ G +K+ +K+ CL
Sbjct: 590 HCYCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACL 649
Query: 637 EACEKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGA--GTTKRKELHGTTPIRALSG 694
+AC KLH++GAL D LLP S N +S N S + R+ELH I A+
Sbjct: 650 KACVKLHKLGALTDFLLPG--PGSRKNKVSVTNNSSNNKVEDDSLREELHEML-IPAVLK 706
Query: 695 RWGEKCGVI--LHAYKFNFACSIVTEIYSGFVLLIESELDNDVGNFELELYLV-SKTVKA 751
G K + LH Y F Y F L + + L + +++L+L + VKA
Sbjct: 707 PSGLKLDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQVDLHLARGRIVKA 766
Query: 752 TVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVKSKSSGSREFFLKRETNSLWSPSYM 811
+ G++ + ++M A FQE+ K+ + S L + +L S
Sbjct: 767 GIKHLGKIAFEKEKMMLAHKFQEMCL-----KILLDRSEFTSPHVKLGNDV-TLEINSTF 820
Query: 812 YLLLPLEIVNTFGDGSWRINWSGINPCASVVEFIKEKSFLGAAQCNNNGGNSSPCRTSPC 871
YLLLP++ +GD + I+W + C SSP P
Sbjct: 821 YLLLPIK-QKCYGD-RFMIDWPAVERCL-----------------------SSPIFKDPI 855
Query: 872 KTGCHG----KDVIHLANGSVDAKNLKDMVVLAIHTGRIYSIVEIVNNSSAESPFDGNTD 927
H + + L +G ++ VV + H + + I++ +A S G
Sbjct: 856 DVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINAWSEHSG--- 912
Query: 928 DDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLVNFNDGGGSGKGSKSGMNTKKP 987
T+ +F E++ I L HP QPLL+ KQ N NLL N +G +
Sbjct: 913 ---ATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRLPETTESEGREL------L 963
Query: 988 QMHVHMPPEL--LVRVDVPISVVKSLYLLPSVMQRLESLMLASQLRE-EINCHSRNFHIP 1044
+ V +PPEL L + + SL LLPS+M RLE+L++A +L++ ++ I
Sbjct: 964 EHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKDVMLSSFPEASQIS 1023
Query: 1045 SSLILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCN 1104
+S ILEALTT C E S+ER E+LGD+ LKY V H F+TY EGQL+ RRS V N
Sbjct: 1024 ASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNN 1083
Query: 1105 STLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTK 1164
S L++L +KLQ YIRD F+P ++ APG RP C D +EV L D +
Sbjct: 1084 SHLYELSIRKKLQVYIRDQQFEPTQFFAPG----RPCKVVCNTD-VEVRLHQMDIHPDNR 1138
Query: 1165 VVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDC 1224
C H W+ K IAD E+LIGA+ V GG AA + W+GID D +
Sbjct: 1139 ENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRV 1198
Query: 1225 ITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQEFY--CYQNL------- 1275
+ +S+ + +I +E IGY+F K LL +A H S + CYQ L
Sbjct: 1199 LDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAV 1258
Query: 1276 -------------------------------------------YKHLQHCSTLLLSQITE 1292
+KHL S L S I++
Sbjct: 1259 LEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISK 1318
Query: 1293 YVKSFPKPGETTDSGPSMKAPKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTP 1352
+ D PKALGD++ES +GAVL+D+ NL+ VW++ +L P++T
Sbjct: 1319 FEMYVKLSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTF 1378
Query: 1353 DKLELPPLRELIELCDSLGYFVKENCTLKGE-MVHAELRLQLKDVLLVGEGQERSRKAAK 1411
+ P+REL ELC G+ + +K + H ++ + +K +++ R+ KAA+
Sbjct: 1379 ANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAAR 1438
Query: 1412 GKAASQLLKKLE 1423
AA + L KL+
Sbjct: 1439 KFAAQETLSKLK 1450
>sp|Q3EBC8|DCL2_ARATH Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300
PE=1 SV=2
Length = 1388
Score = 567 bits (1460), Expect = e-160, Method: Compositional matrix adjust.
Identities = 445/1425 (31%), Positives = 682/1425 (47%), Gaps = 222/1425 (15%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKK----LIIFLAPT 102
R YQ++ E A ++NTI LETG+GKT+IA+ML++ A F+K +FL P
Sbjct: 25 RSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYL-----FRKPSPCFCVFLVPQ 79
Query: 103 VHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKA 162
V LV QQ + +++HTD +V Y+G GVD WDS W++E++K +VLVMTP ILLDALR +
Sbjct: 80 VVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHS 139
Query: 163 FLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHK-----SDNKPKVFGMTASPVVRKGVS 217
FLSL ++ +++DECHHA G HPY IM+EFYHK + N P++FGMTAS V KG
Sbjct: 140 FLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKG-- 197
Query: 218 SAMDCE-GQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCG---SDLKGK 273
+D +I ELE+ ++S+V+T E+++ + FVP + S ++Y K + L K
Sbjct: 198 ENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVEK 257
Query: 274 LEVSWSKFDASLSKLQGSQLNCYKDMDDKH-KTLRKQLSDYHAKILYCLDELGLICAYEA 332
LE K SL L D++ ++ K+L + + YCLD+LG++ A +A
Sbjct: 258 LERLTIKHRLSLGTL---------DLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKA 308
Query: 333 VKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSAL-----PLADKIFLD---FGF 384
+ S+ Q FL L++ AL A + FL G
Sbjct: 309 AQ----------------SLSASQNDSFLWGELNMFSVALVKKFCSDASQEFLAEIPQGL 352
Query: 385 DYSKA-----VDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKV-P 438
++S A + G ++ K L++ L + + CIIFV+R+I A V+E + ++ P
Sbjct: 353 NWSVANINGNAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILP 412
Query: 439 FLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIR 498
+ Y+ G+ + + T K Q E++E FR G VN++ AT ++EEG+ V +C+ VIR
Sbjct: 413 NCNNWKTKYVAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIR 472
Query: 499 FDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTAL-------SRDPEACF---LK 548
FD + S+IQSRGRAR NS +++M+E + +T + L R E L
Sbjct: 473 FDPASNICSFIQSRGRARMQNSDYLMMVESGDL-LTQSRLMKYLSGGKRMREESLDHSLV 531
Query: 549 ACTYVKTKS----YIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAY 604
C + S + VESTGA+VT SSV+LI+ YC LPSD+Y+ P P F + +
Sbjct: 532 PCPPLPDDSDEPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQGS- 590
Query: 605 ECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNL 664
C L LP + P + + N + KQ VCL+AC +LH+VGAL+DHL+P +
Sbjct: 591 -CTLYLPKSCPVKEV--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAET--- 644
Query: 665 ISKKNESLPGAGTTKRKELHGTTPIR---ALSGRWGEKCGVILHAYKFNFACSIVTEIYS 721
+S+K E + + + P L ++ + H Y + +
Sbjct: 645 VSQKLEKI---------QYNTEQPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHL 695
Query: 722 GFVLL-IESELDNDVGNFELELYLVSKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGL 780
VLL L++D+GN L T+ T+S G HL +++ + FQ F L
Sbjct: 696 NDVLLGTRVVLEDDIGNTSFRLEDHRGTIAVTLSYVGAFHLTQEEVLFCRRFQITLFRVL 755
Query: 781 FGKLFVKSKSSGSREFFLKRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINWSGINPCAS 840
V++ L+ + YLL+P +T + I+W I
Sbjct: 756 LDH-SVENLMEALNGLHLRDGV------ALDYLLVP----STHSHETSLIDWEVIRSVNL 804
Query: 841 VVEFIKEKSFLGAAQCNNNGGNSSPCRTSPCKTGCHGKDVIHLANGSVDAKNLKDMVVLA 900
+ EK C+ NG + ++H +G +++ +V
Sbjct: 805 TSHEVLEKH----ENCSTNGASR----------------ILHTKDGLFCTCVVQNALVYT 844
Query: 901 IHTGRIYSIVEIVNNSSAESPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHN 960
H G +Y ++NN + S D +T++ Y+ E++GI L +PLL +
Sbjct: 845 PHNGYVYCTKGVLNNLNGNSLLTKRNSGD-QTYIEYYEERHGIQLNFVDEPLLNGRHIFT 903
Query: 961 PHNLLVNFNDGGGSGKGSKSGMNTKKPQMHVHMPPELLVRVDVPISV--VKSLYLLPSVM 1018
H+ L +K + + V +PPEL + PISV + S +PSVM
Sbjct: 904 LHSYL----------HMAKKKKEKEHDREFVELPPELCHVILSPISVDMIYSYTFIPSVM 953
Query: 1019 QRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAV 1078
QR+ESL++A L++ I +IP+ +LEA+TT C + F +E LE LGDS LKYAV
Sbjct: 954 QRIESLLIAYNLKKSI----PKVNIPTIKVLEAITTKKCEDQFHLESLETLGDSFLKYAV 1009
Query: 1079 SCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSL 1138
LF HEG LS ++ + N L + G +KLQG+IRD F+P+ W+ PGQ
Sbjct: 1010 CQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFEPKGWMVPGQ--- 1066
Query: 1139 RPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGG 1198
+ L + + V R + K++AD E+LIGAY G
Sbjct: 1067 ---------SSAAYSLVNDTLPESRNIYVA-----SRRNLKRKSVADVVESLIGAYLSEG 1112
Query: 1199 GLIAALYMMKWLGIDADLEVSLVD-DCITRASLRSYVPRINEIKDIESKIGYEFTVKFLL 1257
G +AAL M W+GI D + + D +A ++ + +ES + Y F K LL
Sbjct: 1113 GELAALMFMNWVGIKVDFTTTKIQRDSPIQAE------KLVNVGYMESLLNYSFEDKSLL 1166
Query: 1258 QEAITHASVQ-----------EFY------------------------------------ 1270
EA+TH S EF
Sbjct: 1167 VEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNE 1226
Query: 1271 CY------QNLYKHLQHCSTLLLSQITEYVKSFPKPGETTDSG--PSMKAPKALGDLLES 1322
CY NL+KH+ + S L I+ V F + + G + PK LGD++ES
Sbjct: 1227 CYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGDVIES 1286
Query: 1323 IVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELC 1367
+ GA+ +D+ N + V+ KP+L ++TP+ ++L P+REL ELC
Sbjct: 1287 LAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELC 1331
>sp|Q10HL3|DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp. japonica
GN=DCL2A PE=2 SV=1
Length = 1410
Score = 565 bits (1456), Expect = e-159, Method: Compositional matrix adjust.
Identities = 433/1433 (30%), Positives = 681/1433 (47%), Gaps = 222/1433 (15%)
Query: 45 IPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVH 104
+ R YQL+ E A R NT+A LETG+GKT+IAVML++ A ++ ++ +FL PTV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 105 LVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFL 164
LV QQ V+ HTD V+++ G GVD WD+ W+ ++ +VLVMTPQILLD LR +F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 165 SLDIVCFIVIDECHHATGNHPYTKIMKEFYH------KSDNKPKVFGMTASPVVRKGVSS 218
L + ++ DECHHA GN PY I KEFYH SD P++FGM+AS + K ++
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDLN- 211
Query: 219 AMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKL---- 274
+ QISE+E+ ++S+V+T++ ++ + ++P A +D S S+L +
Sbjct: 212 PHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNI-SSELHANILSCL 270
Query: 275 -EVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAV 333
++ +A KL GS L + ++++S H +YCL LG+ A +A
Sbjct: 271 NRLNKKHIEALDRKLHGSSL----------ENAKQRISKLHHTFVYCLYNLGVWLAAKAA 320
Query: 334 KICLEKVLKAQEECEIYRQSSLQCKYFLEEVL--HVIGSALPLADKI------FLD---F 382
E + Y ++SL F E L +V G ++++ FL
Sbjct: 321 ------------EVQSYEENSLS---FWGETLDKNVEGFIRNYSEEVHRELSCFLKNGHI 365
Query: 383 GFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTH 442
G + G ++ K+H L++ L + + CI+FVER+I + V+E + + ++
Sbjct: 366 GEKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSG 425
Query: 443 LTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLP 502
V ++ GS + + + K E++ESFR GKV+++ AT ++EEG+ VP+C+ VIRFD
Sbjct: 426 WNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPS 485
Query: 503 KTVSSYIQSRGRARQHNSQFILMLER--------SERSVTDTALSRDPE------ACFLK 548
TV S+IQSRGRAR NS ++L++ R +E+ + + R+ +C
Sbjct: 486 ATVCSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPL 545
Query: 549 ACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECEL 608
T + Y VEST A VT +SSV LIH +C LPSD+Y+ P P F A C L
Sbjct: 546 ENTLCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDIDKASGT--CTL 603
Query: 609 TLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISKK 668
LP ++P QT+ ++ K+ VCL+AC++LH +GAL D LLP ++ P +
Sbjct: 604 HLPKSSPVQTV--NVEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEE----- 656
Query: 669 NESLPGAGTTKRKELHGTTPIRALSG-RWGEKCGVILHAYKFNFACSIVTEIYSGFVLLI 727
P + E P + R + G I + YK + T + +L +
Sbjct: 657 ----PDIVVENKIEQPSYFPEEFVDNWRSFSRLG-IYYCYKISLEGCPKTASPTDILLAL 711
Query: 728 ESELDNDVGNFELELYLVSKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVK 787
+ +L +D + +L T+ G +HL+ +Q+ A+ FQ + L G ++
Sbjct: 712 KCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLE 771
Query: 788 SKSSGSREFFLKRETNSLWSP-SYMYLLLPLEIVNTFGDGSWRINWSGINPCASVVEFIK 846
S+G + F + + P +YLLLPL S RI+W +
Sbjct: 772 V-SNGIKYF------HEMQVPIGVVYLLLPLV--------SGRIDWCSMK---------- 806
Query: 847 EKSFLGAAQCNNNGGNSSPCRTSPCKTGCHGKDVIHLANGSVDAKNLKDMVVLAIHTGRI 906
F + N + + C + C D++ +G LK+ +V H
Sbjct: 807 ---FSSSPIYEANNKHMTHCHS------CKDIDLLQTKDGPFCRCILKNSIVCTPHNNIF 857
Query: 907 YSIVEIVNNSSAESPFDGNT-----DDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNP 961
Y I ++ D N+ D T+ +YF ++G+ L QPLL + +
Sbjct: 858 YVISGFLD-------LDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPLL----AGSK 906
Query: 962 HNLLVNFNDGGGSGKGSKSGMNTKKPQMHVHMPPELLVRVDVPISV--VKSLYLLPSVMQ 1019
H + NF S K + G + V +PPEL + P+S + +PS+M
Sbjct: 907 HVKVRNFLHNCYSKKEKEPG-----DRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMF 961
Query: 1020 RLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAVS 1079
R++ ++L+ +L+ ++ + F +P ILEALTT C E FS E LE LGDS LKY +
Sbjct: 962 RIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTT 1021
Query: 1080 CHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLR 1139
HLF Y +HEG L+ + + N+ L +L L GYI F+PR W+
Sbjct: 1022 RHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWI-------- 1073
Query: 1140 PVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDM-GHRWMG--SKTIADCAEALIGAYYV 1196
+PC +D E + K+ P M R M SK IAD EALIGAY
Sbjct: 1074 -IPC---LDYDE--------RDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLS 1121
Query: 1197 GGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFL 1256
G AA +MK LG++ + + + ++ ++ +E +GY+F L
Sbjct: 1122 TAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFI----NVRSLEGMLGYKFNDSLL 1177
Query: 1257 LQEAITHASVQ------------------------EFY---------------------- 1270
L EA+TH S Q E+Y
Sbjct: 1178 LLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNN 1237
Query: 1271 -CYQN------LYKHLQHCSTLLLSQITEYV----KSFPKPGETTDSGPSMKAPKALGDL 1319
CY + L KH+ H S+ L +++ Y+ +SF P ++G + PK LGD+
Sbjct: 1238 NCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIGL--PKVLGDV 1295
Query: 1320 LESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGY 1372
+ESI GA+ +D+K + + VWR K +L P+ TP+ +E P++ L E CD +
Sbjct: 1296 IESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSF 1348
>sp|Q69LX2|DCL2B_ORYSJ Endoribonuclease Dicer homolog 2b OS=Oryza sativa subsp. japonica
GN=DCL2B PE=2 SV=2
Length = 1377
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 413/1408 (29%), Positives = 663/1408 (47%), Gaps = 212/1408 (15%)
Query: 45 IPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVH 104
+ R YQL+ E A R NT+A LETG+GKT+IAVML++ A ++ ++ +FL PTV
Sbjct: 33 MARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVV 92
Query: 105 LVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFL 164
LV QQ V+ HTD V+++ G GVD WD+ W+ ++ +VLVMTPQILLD LR +F
Sbjct: 93 LVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFF 152
Query: 165 SLDIVCFIVIDECHHATGNHPYTKIMKEFYH------KSDNKPKVFGMTASPVVRKGVSS 218
L + ++ DECHHA GN PY I KEFYH SD P++FGM+AS + K ++
Sbjct: 153 RLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDLNQ 212
Query: 219 AMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKL---- 274
+ QISE+E+ ++S+V+T++ ++ + ++P A +D S S+L +
Sbjct: 213 H-NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNI-SSELHANILSCL 270
Query: 275 -EVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAV 333
++ +A KL GS L + ++++S H +YCL LG+ A +A
Sbjct: 271 NRLTKKHIEALDRKLHGSSL----------ENAKQRISKLHRTFVYCLYNLGVWLAAKAA 320
Query: 334 KICLEKVLKAQEECEIYRQSSLQCKYFLEEVL--HVIGSALPLADKI------FLD---F 382
E + Y ++SL F E L +V G ++++ FL
Sbjct: 321 ------------EVQSYEENSLS---FWGETLDKNVEGFIRNYSEEVHRELSCFLKNGHI 365
Query: 383 GFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTH 442
G + G ++ K+H L++ L + + CI+FV+R+I + V+E + + ++
Sbjct: 366 GEKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSIHQMSG 425
Query: 443 LTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLP 502
V ++ GS + + + K E++ESFR GKV+++ AT ++EEG+ VP+C+ VIRFD
Sbjct: 426 WNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPS 485
Query: 503 KTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFLKACTYVKTKSYIVES 562
TV S+IQSRGRAR NS ++L++ R + A FL + ++ +S + S
Sbjct: 486 ATVCSFIQSRGRARMENSDYLLLVGRGDVEAHTNAKK------FLASGQIMREESLRLGS 539
Query: 563 TGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSNAPFQTIVGP 622
S L + CE D YY + + + + C L LP ++P QT+
Sbjct: 540 I-------SCQPLENTLCE----DTYYRVESTPAFDIDKASGTCTLHLPKSSPVQTV--N 586
Query: 623 TSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGAGTTKRKE 682
++ K+ VCL+AC++LH +GAL D LLP ++ P + P + E
Sbjct: 587 VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEE---------PDIVVENKIE 637
Query: 683 LHGTTPIRALSG-RWGEKCGVILHAYKFNFACSIVTEIYSGFVLLIESELDNDVGNFELE 741
P + R + G I + YK + T + +L ++ +L +D + +
Sbjct: 638 QPSYFPEEFVDNWRSFSRLG-IYYCYKISLEGCPKTASPTDILLALKCDLGSDFTSSSFK 696
Query: 742 LYLVSKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVKSKSSGSREFFLKRE 801
L T+ G +HL+ +Q+ A+ FQ + L G ++ S+G + F
Sbjct: 697 LPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEV-SNGIKYF----- 750
Query: 802 TNSLWSP-SYMYLLLPLEIVNTFGDGSWRINWSGINPCASVVEFIKEKSFLGAAQCNNNG 860
+ + P +YLLLPL S RI+W + F + N
Sbjct: 751 -HEMQVPIGVVYLLLPLV--------SGRIDWCSMK-------------FSSSPIYEANN 788
Query: 861 GNSSPCRTSPCKTGCHGKDVIHLANGSVDAKNLKDMVVLAIHTGRIYSIVEIVN-NSSAE 919
+ + C + C D++ +G LK+ +V H Y I ++ ++++
Sbjct: 789 KHMTHCHS------CRDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSR 842
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLVNFNDGGGSGKGSK 979
P D T+ +YF ++G+ L QPLL + N L N+ G +
Sbjct: 843 LP---QHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNYYYKKEKEPGDR 899
Query: 980 SGMNTKKPQMHVHMPPELLVRVDVPISV--VKSLYLLPSVMQRLESLMLASQLREEINCH 1037
V +PPEL + P+S + +PS+M R++ ++L+ +L+ ++
Sbjct: 900 YS---------VELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPT 950
Query: 1038 SRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSAR 1097
+ F +P ILEALTT C E FS E LE LGDS LKY + HLF Y +HEG L+
Sbjct: 951 VQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKM 1010
Query: 1098 RSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGK 1157
+ + N+ L +L L GYI F+PR W+ +PC L+ G
Sbjct: 1011 KKNLISNAALCQLACSSNLVGYIHAEEFNPRDWI---------IPC------LDYDERG- 1054
Query: 1158 FFTQDTKVVVGKPCDM-GHRWMG--SKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDA 1214
+ K+ P M R M SK IAD EALIGAY G AA +MK LG++
Sbjct: 1055 ----NKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNI 1110
Query: 1215 DLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQ------- 1267
+ + + ++ +++ +E +GY+F LL EA+TH S Q
Sbjct: 1111 EFHTEIPVERKISMKAEEFI----DVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSC 1166
Query: 1268 -----------------EFY-----------------------CYQN------LYKHLQH 1281
E+Y CY + L KH+ H
Sbjct: 1167 YQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILH 1226
Query: 1282 CSTLLLSQITEYV-KSFPKPGETTDSGPSMKAPKALGDLLESIVGAVLIDTKLNLDEVWR 1340
S+ L +++ Y+ +SF P ++G + PK LGD++ESI GA+ +D+K + + VWR
Sbjct: 1227 SSSELHRKMSYYLGQSFTGPSYGWEAGIGL--PKVLGDVIESIAGAIYLDSKCDKEVVWR 1284
Query: 1341 IFKPILSPIVTPDKLELPPLRELIELCD 1368
K +L P+ TP+ +E P++ L E CD
Sbjct: 1285 SMKRLLEPLATPETIEPDPVKGLQEFCD 1312
>sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1
SV=2
Length = 1909
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 293/874 (33%), Positives = 437/874 (50%), Gaps = 107/874 (12%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLV 106
R YQL V E AK +NTIA LETGAGKT+IA++LIK + + + S K L +FL P V LV
Sbjct: 250 RRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQNRKMLSVFLVPKVPLV 309
Query: 107 HQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFLSL 166
+QQ +VIR T F+V Y G G D WDS+ WQ+E VLVMT QILL+ LR + + +
Sbjct: 310 YQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVMTAQILLNILRHSIIRM 369
Query: 167 DIVCFIVIDECHHATGNHPYTKIMKEFYHKS--DNKPKVFGMTASPVVRKGVSSAMDCEG 224
+ + +++DECHHA HPY+ +M EFYH + D +P +FGMTASPV KGVSS +DC
Sbjct: 370 ETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAI 429
Query: 225 QISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWSKFDAS 284
+I LE+ LDS V TI+D+ E+E VP E YD++ S + ++ + +A+
Sbjct: 430 KIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEEAA 489
Query: 285 LSKLQGSQLNCYKDMDDKHKTLRKQL--------SDYHAKIL-------YCLDELGLICA 329
+ + S+ D K +Q+ SD A ++ Y L ELG CA
Sbjct: 490 QASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCA 549
Query: 330 YEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSAL----------------- 372
Y+ + L L++ E Q Y L EV+ ++ L
Sbjct: 550 YKVGQSFL-SALQSDERVNFQVDVKFQESY-LSEVVSLLQCELLEGAAAEKVAAEVGKPE 607
Query: 373 -----------PLADKIFLDFGFDYSK----AVDLGYISTKLHELLQLFLSFGKSTQVLC 417
L D + G + AV G ++ K+ L++L L + +
Sbjct: 608 NGNAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRA 667
Query: 418 IIFVERIIAAKVVERFVKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNL 477
I+FVER++AA V+ + ++P L+ + A + G S + + ++Q + + FR G V L
Sbjct: 668 IVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSSQMQ-DTISKFRDGHVTL 726
Query: 478 LFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERS-------- 529
L AT V EEG+ + C+ V+RFDL KTV +YIQSRGRAR+ S +ILM+ER
Sbjct: 727 LVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNVSHAAFL 786
Query: 530 -----------ERSVTDTALSRDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLIHR 578
+ ++ T LS + L + V Y VE+TGA V+ +S+V L+H
Sbjct: 787 RNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMVSLNSAVGLVHF 846
Query: 579 YCEMLPSDKYYTPKPIFKYKSAEE-----AYECELTLPSNAPFQTIVGPTSRNKNLSKQL 633
YC LP D+Y +P F + E+ Y C L LP NAPF+ + GP + L++Q
Sbjct: 847 YCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQA 906
Query: 634 VCLEACEKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGAGTTKRKELHGTTPIRALS 693
VCL AC+KLH++GA D LLP + + +E P GT + +E + L
Sbjct: 907 VCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHREFYPEGVADVLK 966
Query: 694 GRW----GEKC--GVILHAYKFNFAC--------SIVTEIYSGFVLLIESELDNDVGNFE 739
G W E C + H Y +N C ++E+ S F +L +ELD +V +
Sbjct: 967 GEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEV-SEFAILFGNELDAEVLSMS 1025
Query: 740 LELYLVSKTV-KATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKLFVKSKSSGSREFFL 798
++LY+ + KA+++ G + + +Q+S K F + + L V + S
Sbjct: 1026 MDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIV---LDVDVEPS------- 1075
Query: 799 KRETNSLWSPSYMYLLLPLEIVNTFGDGSWRINW 832
+ W P+ YL +P+ NT + INW
Sbjct: 1076 ----TTPWDPAKAYLFVPV-TDNTSMEPIKGINW 1104
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 236/787 (29%), Positives = 350/787 (44%), Gaps = 159/787 (20%)
Query: 878 KDVIHLANGSVDAKNLKDMVVLAIHTGRIYSIVEIVNNSSAESPFDGNTDD----DSKTF 933
K + +A+G + A++L +V A H+G+ + + I + SAE+ F + T+
Sbjct: 1196 KGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTY 1255
Query: 934 VNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV-NFNDGGGSGKGSKSGMNTKKPQMHVH 992
+Y+ +KYG+ L QPL++ + NLL F G S +V
Sbjct: 1256 ADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGES-------ETVLDKTYYVF 1308
Query: 993 MPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEAL 1052
+PPEL V + S+++ LPS+M+R+ES++LA QL+ I+ + IP+S ILEAL
Sbjct: 1309 LPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLIS-----YPIPTSKILEAL 1363
Query: 1053 TTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGT 1112
T C E+F ER ELLGD+ LK+ VS LFL YP+KHEGQL+ R V N L++
Sbjct: 1364 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFAL 1423
Query: 1113 DRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDG--KFFTQDTKVVVGKP 1170
+ LQ YI+ F P RW APG VP DT DG FF ++ K V +
Sbjct: 1424 VKGLQSYIQADRFAPSRWSAPG------VPPVFDEDT----KDGGSSFFDEEQKPVSEEN 1473
Query: 1171 CDM----------------GHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDA 1214
D+ +R + SKT+AD EALIG YYV GG IAA ++MKW+GI
Sbjct: 1474 SDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHV 1533
Query: 1215 DLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHAS--VQEFYCY 1272
+ + VD + ++ V + + +E + YEF K LL EAITHAS CY
Sbjct: 1534 EDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCY 1593
Query: 1273 QN--------------------------------------------------LYKHLQHC 1282
Q L+ +L+H
Sbjct: 1594 QRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHG 1653
Query: 1283 STLLLSQITEYVKSF----PKPGETTDSGPSMKAPKALGDLLESIVGAVLIDTKLNLDEV 1338
S+ L QI E+VK KPG + KAPK LGD++ESI GA+ +D+ +
Sbjct: 1654 SSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAA 1713
Query: 1339 WRIFKPILSPIVTPDKLELPPLRELIELCDSLGYFVKENCTLKGEMVHAELRLQLKDVLL 1398
W++F+P+L P+VTP+ L + P+REL E C ++ + G E+ + D +
Sbjct: 1714 WKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFI---DGVQ 1770
Query: 1399 VGEGQERSRKAAK---GKAASQLLKKLEVCEKRISKGASNTGKLGDDCRQTTKEDLPEPP 1455
VG Q +K A+ + A LK+ E+ E + + N G G ED E
Sbjct: 1771 VGVAQNPQKKMAQKLAARNALAALKEKEIAESK--EKHINNGNAG--------EDQGENE 1820
Query: 1456 SCKRQKGTEAAIPAGDSCKKAYCMTVGTPVVAPINMKKGGPRTSLFQLCKTMLWPMPTFE 1515
+ ++ G + P R +L +C WPMP++
Sbjct: 1821 NGNKKNGHQ-----------------------PFT------RQTLNDICLRKNWPMPSYR 1851
Query: 1516 -TTESKSRTLLVFCEGLEKRTGFSSFVSKITLHIPEFGNVECNGDPRADKKSSFDSAALI 1574
E F G+ T + EC G+P K + DSAA++
Sbjct: 1852 CVKEGGPAHAKRFTFGVRVNTSDRGWTD------------ECIGEPMPSVKKAKDSAAVL 1899
Query: 1575 MLHELER 1581
+L L +
Sbjct: 1900 LLELLNK 1906
>sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio GN=dicer1 PE=2 SV=2
Length = 1865
Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 219/723 (30%), Positives = 339/723 (46%), Gaps = 105/723 (14%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTV 103
+ PR YQ+++ E A NTI L TG+GKT IAV+LIK+++ I+ K+ +FL
Sbjct: 32 YTPRKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGENGKR-TVFLVNAA 90
Query: 104 HLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAF 163
V QQ +R H+D +V +Y ++ + W + W +E+ +N VLVMT I L L+
Sbjct: 91 SSVAQQASTVRTHSDLQVGDYM-SEDMTSWPEEMWNREMIENQVLVMTCHIFLHVLKNGV 149
Query: 164 LSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMDCE 223
L L + +V DECH A HPY +IMK + P++ G+TAS + G D E
Sbjct: 150 LPLSKINLLVFDECHLAITGHPYREIMK-ICEGCPSCPRILGLTAS--ILNGKCDPCDLE 206
Query: 224 GQISELESTLDSQVFTIEDKTEMEVFVPSAKESC----RFYDQSKFCGSDLKGKLEVSWS 279
+I LE L S T D ++ + +E ++ DQS G E +
Sbjct: 207 EKIQNLEKILQSNAETATDLVVLDRYASQPREEVLDCGQYQDQS--------GLSERLLN 258
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKIC--- 336
+ D +L+ L L+ +++ D ++ L+D A L LG CA +A I
Sbjct: 259 ELDEALNFLNDCNLSVHREDRDPTFISKQVLNDCRA----VLTVLGPWCADKAAGIMVRE 314
Query: 337 LEKVLKAQEE--------------------CE-IYRQSSLQCKYFLEEV---LHVIGSAL 372
L+K +K ++E CE + +SL K+ +V L ++
Sbjct: 315 LQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVTPKVIRLLEILHEYK 374
Query: 373 PLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKS-----------TQVLC-IIF 420
P + F + ++ D Y+S E T +LC IIF
Sbjct: 375 PFERQQFESVEWYNNRNQD-NYVSWSDSEDDDEDEEAEAKEKTEANFPSPFTNILCGIIF 433
Query: 421 VERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV-------QKEVLES 469
VER A V+ R +K+ P L +++ ++TG + + K Q+EVL
Sbjct: 434 VERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQMEVEFRKQEEVLRK 493
Query: 470 FRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERS 529
FR + NLL AT ++EEG+ +P C+ V+RFDLP SY+QS+GRAR S +I ML S
Sbjct: 494 FRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYI-MLADS 552
Query: 530 ERSVT---DTALSRDPEACFLKACTYVKT----------------KSYIV--ESTGASVT 568
ER+ T D + E C+ Y++ E G VT
Sbjct: 553 ERTKTFQEDLKTYKAIEKILRNKCSKSAECNDFELEPVTDDDNVLPPYVLRSEDGGPRVT 612
Query: 569 TDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEE---AYECELTLPSNAPFQT-IVGPTS 624
++++ ++RYC LPSD + P K K+ E Y L LP N+P + + GP
Sbjct: 613 MNTAIGHVNRYCARLPSDPFTHLAP--KCKTVEMNTGGYRSTLFLPINSPLRVPVTGPVM 670
Query: 625 RNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKNESLPG-AGTTK 679
L+++ V L CEKLH++G L+DHL+P +V+ E +L ++ S+PG G+TK
Sbjct: 671 NCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTK 730
Query: 680 RKE 682
R++
Sbjct: 731 RRQ 733
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 1047 LILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
LIL+ALT + F++ERLE+LGDS LK+A++ +LF TYP HEG+LS RS V N
Sbjct: 1278 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1337
Query: 1107 LHKLGTDRKLQGYIRDSAFDPR-RWVAPG 1134
L++LG + L + S FDP W+ PG
Sbjct: 1338 LYRLGKKKGLPSRMVVSIFDPPVNWLPPG 1366
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW+++ P++ P++ +P P+REL+E+
Sbjct: 1748 PKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1807
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1808 AKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1859
Query: 1427 KRI 1429
++
Sbjct: 1860 PQV 1862
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS--- 974
+P + +TF Y+ KY + L + QPLL + + + NLL + N G +
Sbjct: 941 TPLSKFPSPEYETFAEYYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1000
Query: 975 GKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
K + Q + PEL +P S+ + LPS++ RL L+ A +LR +
Sbjct: 1001 SSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQ 1059
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 1178 MGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGI------------DADLE---VSLVD 1222
+ K+IADC EAL+G Y G AA + LG+ A+L+ + +
Sbjct: 1530 IADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPP 1589
Query: 1223 DCITR--ASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQEFYCYQNLYKHLQ 1280
C+ + R+ I+ + ESKI Y F K L +A THAS + + Y+ L+
Sbjct: 1590 RCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYH-YNTITDCYQRLE 1648
Query: 1281 HCSTLLLSQ-ITEYVKSFPK---PGETTD 1305
+L IT+++ P+ PG TD
Sbjct: 1649 FLGDAILDYLITKHLYEDPRQHSPGVLTD 1677
>sp|A1CBC9|DCL1_ASPCL Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 /
CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl1 PE=3
SV=2
Length = 1534
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 188/644 (29%), Positives = 316/644 (49%), Gaps = 79/644 (12%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQA---IKSNGF-KKLIIFLAP 101
PR YQ+++FE AK +NTIAVL+TG+GKT+IAV+L++ + Q ++NG ++ FL
Sbjct: 123 PREYQIELFERAKAQNTIAVLDTGSGKTLIAVLLLRHVLQNELNDRANGKPHRVSFFLVD 182
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V L +QQ V+R + D V ++GA G D WD Q W++ + +N V+V T +IL L
Sbjct: 183 SVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQCLLN 242
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSD--NKPKVFGMTASPVVRKGVSSA 219
+ + ++ + ++ DE HH +HPY +I+++ Y K+ +P++FGMTASP+ KG
Sbjct: 243 SHVRMNQINLLIFDEAHHTKKDHPYARIIRDSYFKASPPQRPRIFGMTASPIDTKG---- 298
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWS 279
D + LE+ LDS++ T T + V E YD +LE S
Sbjct: 299 -DIIAAATRLETLLDSRIATTSKITLLRQVVSRPIEKVWAYD-----------RLE---S 343
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEK 339
F +L KL ++ K ++ + Y ELG C+ A L
Sbjct: 344 PFKTNLHKLMENRFGNVKALEGVFRF-----------AWYASSELGRWCSDRAWLYALAD 392
Query: 340 VLKAQEECEIYR-----QSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGY 394
+ + E + + ++ + +E+ + ++ + F D F G
Sbjct: 393 DVLPKLEGHVNKLAESTAAATERDMAFKEITLIKEASNIVKAHTFNDPEFP-------GE 445
Query: 395 ISTKLHELLQLFLS--FGKSTQVLCIIFVERIIAAKVVERF--VKKVPFLT-HLTVAYLT 449
+S K+ LLQ LS F + + CIIF ++ AK + + +P L + + +
Sbjct: 446 LSPKV-RLLQTELSKHFSHAPETKCIIFTQKRYTAKTLHELFTILSIPHLRPGVLIGVRS 504
Query: 450 GSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYI 509
G ++ +T + Q L FR G++N LFAT V EEG+ +P+C+ V+RFDL T+ Y+
Sbjct: 505 GDIGGMN-ITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYV 563
Query: 510 QSRGRARQHNSQFILMLERSERSVTDTALS--RDPEACFLKACTYVK------------- 554
QSRGRAR ++S + M+E+ + S + L R+ E C +
Sbjct: 564 QSRGRARHYHSTYASMVEK-DNSDHEARLREVREAEKTMQNFCETLPEDRILHGNDHDLD 622
Query: 555 --------TKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYEC 606
+++ V+STGA +T S++ ++ RY L +K TP+ + +S Y C
Sbjct: 623 SLLQHEEGRRTFTVKSTGARLTYHSAIAILARYASSLQYEKETTPQATYVVQSVGNTYVC 682
Query: 607 ELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALND 650
E+ LP +P + + G + K+++KQ + C L + L+D
Sbjct: 683 EVILPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLLRRHKLLDD 726
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 177/496 (35%), Gaps = 144/496 (29%)
Query: 947 HPGQPLLRLKQSHNPHNLLVNFNDGGGSGKGSKSGMNTKKPQMHVHMPPELLVRVDVPIS 1006
H QP+L+ + NLL K KK Q + E L +P S
Sbjct: 973 HWDQPVLQAELVRLRRNLL------------DKLTTEEKKIQTECFICAEPLKISAIPPS 1020
Query: 1007 VVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT------------- 1053
+ + P+++ RL+S +++ + C + I S LEA+T
Sbjct: 1021 IASTCLAFPAIITRLDSYLISIEA-----CDELDLVIRSDYALEAVTKDSDNTEEHRGQQ 1075
Query: 1054 ---TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKL 1110
G +++ ERLE LGD LK A S LF P E R +CN L
Sbjct: 1076 IHFQRGMGKNY--ERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNT 1133
Query: 1111 GTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKP 1170
R++ YIR +F W P L+L L GK ++ K
Sbjct: 1134 AKKRQIYRYIRSRSFSRHVWY-PDGLTL---------------LQGKDHSK-------KM 1170
Query: 1171 CDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASL 1230
+G KTIAD EALIGA + GG M G+ A VS+ D + A
Sbjct: 1171 LSQAKHALGEKTIADVCEALIGACLLSGGPEHRFDM----GVKA---VSVFVDSPSHAVS 1223
Query: 1231 RS------YVPRINEIK-----------DIESKIGYEFTVKFLLQEAITHASVQEFY--- 1270
R Y P +++ +E K+GY F LL A+TH S +
Sbjct: 1224 RWKEYIGLYKPPNYQVRKAEGAETNLALQVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFR 1283
Query: 1271 --CYQNL--------------------------------------------------YKH 1278
CYQ L +KH
Sbjct: 1284 VPCYQRLEFLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKH 1343
Query: 1279 LQHCSTLLLSQITEYVKSFPKPGETTDSGP------SMKAPKALGDLLESIVGAVLIDTK 1332
++ S L +QIT YV+ + E G + PK L D++E+ +GA+ +D+
Sbjct: 1344 IKAFSNPLQAQITYYVEEI-ETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSD 1402
Query: 1333 LNLDEVWRIFKPILSP 1348
+ + + F+ + P
Sbjct: 1403 FSFEVIEAFFQAQIKP 1418
>sp|Q0CW42|DCL1_ASPTN Dicer-like protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl1 PE=3 SV=2
Length = 1519
Score = 253 bits (646), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 227/811 (27%), Positives = 369/811 (45%), Gaps = 83/811 (10%)
Query: 15 VHSPNPPDMGSS--GHDHAVDGPSSSTNSINFIPRIYQLKVFEVAKRRNTIAVLETGAGK 72
V+SP P+ S + +S T +N PR YQ+++FE AK +NTIAVL+TG+GK
Sbjct: 78 VNSPVKPNQAQSELSISSLIGRNASGTGILN--PREYQIELFERAKVQNTIAVLDTGSGK 135
Query: 73 TMIAVMLIKDIAQA---IKSNGFK-KLIIFLAPTVHLVHQQYDVIRVHTDFEVEEYYGAK 128
T+IAV+L+K + Q ++NG ++ FL +V LV+QQ V+R + D V ++GA
Sbjct: 136 TLIAVLLLKHVIQTELIDRANGNPPRISFFLVDSVTLVYQQASVLRNNLDQNVAHFFGAM 195
Query: 129 GVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTK 188
GVD W+ Q W + KN V+V T +IL L A++++ + +V DE HH +HPY +
Sbjct: 196 GVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNAYITMQQINLLVFDEAHHTKKDHPYAR 255
Query: 189 IMKEFYHK--SDNKPKVFGMTASPVVRKGVSSAMDCEGQISELESTLDSQVFTIEDKTEM 246
I+++ Y + ++P++FGMTASPV KG D LE+ LDS++ T T +
Sbjct: 256 IIRDSYLRVPPSSRPRIFGMTASPVDTKG-----DVLEAARNLEALLDSKIATTSKLTIL 310
Query: 247 EVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWSKFDASLSKLQGSQLNCYKDMDDKHKTL 306
V E YD KL+ + F + L KL S+ ++ +
Sbjct: 311 RQVVNRPNEEVWIYD-----------KLQPT---FTSDLYKLMESRFGDISHLEPMFRFA 356
Query: 307 RKQLSDYHAKILYCLDELGLICAYEAVKICLEKVLKAQEECEI--YRQSSLQCKYFLEEV 364
R S ELG CA L + + E I RQS+ + L +
Sbjct: 357 RHATS-----------ELGTWCADRVWVSALADDVLPKVEGSIGGKRQSTGLGQ--LPKD 403
Query: 365 LHVIGSALPLADKIFLDFGFDYSKAVDLGYISTKLHELL-QLFLSFGKSTQVLCIIFVER 423
+H + + A ++ + A + +S+K+ L ++ FG+ T CI+F E+
Sbjct: 404 VHRDITRIKEASELVESHPPNDPGAPEA--LSSKVRVLWKEISQCFGQETNTKCIVFTEK 461
Query: 424 IIAAKVVERF--VKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFAT 481
AKV+ V VP L + + S +T + Q + FR G++N LFAT
Sbjct: 462 RYTAKVLFDLFTVLNVPGLRPGVLIGVRSSDRIGMNVTFRQQILTMVRFRTGEINCLFAT 521
Query: 482 DVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALS-R 540
V EEG+ +P+C+ V+RFDL KT+ Y+QSRGRAR +S + M+E+ +
Sbjct: 522 AVAEEGLDIPDCNLVVRFDLYKTLIQYVQSRGRARHADSTYASMIEKDNADHESILVQVN 581
Query: 541 DPEACFLKACTYVK---------------------TKSYIVESTGASVTTDSSVNLIHRY 579
D E C + + Y + ST A +T S++ ++ RY
Sbjct: 582 DAEKIMQSFCQLLPEDRILHGNDDDTDAVLDREEWEEPYTLPSTAARLTHHSAITVLARY 641
Query: 580 CEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEAC 639
L + + + + +AY CE+ LP +P + G + K+ +K+ EAC
Sbjct: 642 ASSLQYENDTSAQVTYVVLPVNDAYVCEVILPEKSPIRGATGMPAMKKSTAKRYAAFEAC 701
Query: 640 EKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGAGTTKRKELHGTTPIRALSGRWGEK 699
L + L+++L L + +N L A T+ R + P +L W ++
Sbjct: 702 RLLRKHRLLDEYL----NSVYHRRLPAMRNARL--AITSHRTNEYKILPKSSL---WNKQ 752
Query: 700 CGVI---LHAYKFNFACSIVTEIYSGFVLLIESELDNDVGNFELELYLVSKTVKATVSSS 756
GVI L+ + G ++L + F + L +T+ TV +
Sbjct: 753 IGVIPGKLYGTVISLKPLTPLAREHGSMILFTRDRLPQFPTFPIFLGEDVETIVLTVPVN 812
Query: 757 GQVHLDADQMSKAKCFQELFFNGLFGKLFVK 787
++ AD++ F F +F K + K
Sbjct: 813 MELQPSADELDYMTTFTLRIFRDVFRKTYDK 843
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 151/428 (35%), Gaps = 130/428 (30%)
Query: 1014 LPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT----------------TLGC 1057
P+++ RL++ ++ + C I LEALT G
Sbjct: 1013 FPAIISRLDAYLIGLEA-----CKKLGLEISLEYALEALTKDSDNTHEHRSQQVHMQRGM 1067
Query: 1058 CESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQ 1117
+++ ERLE LGD LK A S LF +P +E R +CN L ++L
Sbjct: 1068 GKNY--ERLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELY 1125
Query: 1118 GYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRW 1177
+IR F W G L+L L G+ D +G
Sbjct: 1126 QFIRSRGFSRDTWYPEG-LTL---------------LQGR----DHSKKIGSESKHA--- 1162
Query: 1178 MGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITR--ASLRSYV- 1234
+ KTIAD EALIGA + G M G+ A VS V D AS R Y+
Sbjct: 1163 LAEKTIADVCEALIGAALLTPGPQHRFDM----GVRA---VSAVVDSNEHNAASWRDYIS 1215
Query: 1235 -----------PRINEI---KDIESKIGYEFTVKFLLQEAITHASVQEFY----CYQN-- 1274
P +EI + +E K+GY F LL A TH S + CYQ+
Sbjct: 1216 LYSIPKYQEQAPDGSEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLE 1275
Query: 1275 ------------------------------------------------LYKHLQHCSTLL 1286
L+ HL + S+ L
Sbjct: 1276 FLGDALLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSAL 1335
Query: 1287 LSQITEYVKSFPKPGETTDSGP-----SMKAPKA-LGDLLESIVGAVLIDTKLNLDEVWR 1340
SQIT Y + +D + PK L D++E+ +GAV +D+ +EV
Sbjct: 1336 QSQITHYAEEAQAAASQSDVAVDYWTLTQDPPKVCLPDMVEAYLGAVFVDSNFRFEEVEV 1395
Query: 1341 IFKPILSP 1348
F+ + P
Sbjct: 1396 FFQQHIKP 1403
>sp|Q1DKI1|DCL1_COCIM Dicer-like protein 1 OS=Coccidioides immitis (strain RS) GN=DCL1
PE=3 SV=3
Length = 1500
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 194/642 (30%), Positives = 307/642 (47%), Gaps = 70/642 (10%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQA--IKSNGFK--KLIIFLAP 101
PR YQ+++FE AK+ N IAVL+TG+GKT+IAV+L+K I + I + K ++ FL
Sbjct: 99 PREYQVELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEKPHRVSFFLVD 158
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V LV QQ V++ + + V+++ GA D W+ + W++ + KN V+V T ++L L
Sbjct: 159 SVTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLH 218
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDN--KPKVFGMTASPVVRKGVSSA 219
AF+ ++ + ++ DE H+A +HPY +I+K+FY K N +PK+FGMTASP V +
Sbjct: 219 AFVKMENINLLIFDEAHNAKKDHPYARIVKDFYLKDGNAKRPKIFGMTASP-----VDAK 273
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWS 279
MD LE+ L+SQ+ T + + + VP E YD
Sbjct: 274 MDVVKAARNLETLLNSQIATASNLSLLRQSVPRPNEEVWSYD------------------ 315
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICL-- 337
+ D Q + YK++ + LR L L LG CA L
Sbjct: 316 RLD------QPFETRLYKELRSRFGDLRA-LEKLFTFSLKASSNLGAWCADWVWSYALTE 368
Query: 338 EKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYIST 397
E + K + +L + + + A +I F AV +S
Sbjct: 369 ESLPKLEGRAARTAMGNLPIAKIVRPEAEI--QRIREASEIIRSHKFG-DPAVRPELLSP 425
Query: 398 KLHELLQLFLS-FGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHLTVAYLTGSTTSVD 456
K+ L L F + T CI+F E+ A+++ ++ HL L G +
Sbjct: 426 KVRRLHHELLKYFERHTDTKCIVFTEQRHTARILCDLFSRIG-TKHLRPGVLIGVRSDAS 484
Query: 457 -ALTPKVQKEVLE--SFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRG 513
+ +++VL SFR G+VN LFAT V EEG+ +P+C+ ++RFDL T++ YIQSRG
Sbjct: 485 GGMNISFRQQVLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRG 544
Query: 514 RARQHNSQFILMLERS----ERSVT------------------DTALSRDPEACFLKACT 551
RAR NS F ++ER SV D L+ D ++
Sbjct: 545 RARHMNSTFAHLVERDNFVHRESVNHLQSSEEIMKRFCISLPKDRILNSDDVDALYESDR 604
Query: 552 YVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLP 611
KSY V++TGA +T SS+ ++ + L +K + + ++ + A+ CE+ LP
Sbjct: 605 --NRKSYTVQTTGAKLTYSSSLVVLAHFANSLQYEKETSTVVSYYHRFTKNAFVCEVVLP 662
Query: 612 SNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLL 653
+P + IVG + K ++KQ E C L + G L+DH +
Sbjct: 663 EKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 704
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 156/439 (35%), Gaps = 136/439 (30%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P SV + P+++ R+ES ++A + C + I L LEALT
Sbjct: 991 IPASVAAFAFAFPAIISRIESYLIALEA-----CQELDLPISPELALEALTKDSDNTDEH 1045
Query: 1054 -------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
G +++ ERLE LGD LK A S LF P E +R VCN
Sbjct: 1046 RAQQIHFQRGMGKNY--ERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQN 1103
Query: 1107 LHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVV 1166
L K KL +IR +F R W PG L+L L GK Q
Sbjct: 1104 LFKTAVRFKLYAFIRSQSFSRRGWY-PGGLTL---------------LQGK--GQSKGAT 1145
Query: 1167 VGKPCDMGHRWMGSKTIADCAEALIGA----------YYVGGGLIAALY------MMKWL 1210
K + KTIAD EALIGA + + + AL ++ W
Sbjct: 1146 ENKHA------LADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWE 1199
Query: 1211 GIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQEFY 1270
+ + A+ ++ ++ K+GY+F LL+ A TH S +
Sbjct: 1200 QYSRLYSIPKYQTAVVDAA------ELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAW 1253
Query: 1271 ----CYQN--------------------------------------------------LY 1276
CYQ L+
Sbjct: 1254 ARVPCYQRLEFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLH 1313
Query: 1277 KHLQHCSTLLLSQITEYVKSF---------PKPGETTDSGPSMKAPKALGDLLESIVGAV 1327
HL H ST L SQIT YV+ P T S P PK L D++E+ +GA+
Sbjct: 1314 SHLNHFSTSLQSQITNYVEEIEAAELESGDPPDAWTLTSDP----PKCLPDMVEAYIGAI 1369
Query: 1328 LIDTKLNLDEVWRIFKPIL 1346
ID+ + + V F+ L
Sbjct: 1370 FIDSGFSFEVVEEFFQKFL 1388
>sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus GN=Dicer1 PE=1 SV=3
Length = 1916
Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 207/736 (28%), Positives = 346/736 (47%), Gaps = 123/736 (16%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKS--NGFKKLIIFLAP 101
+ PR YQ+++ E A NTI L TG+GKT IAV+L K++A I+ N K +FL
Sbjct: 42 YTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVN 101
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+ + V QQ +R H+D +V EY + W + W +E K+ VL+MT + L L+
Sbjct: 102 SANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKN 161
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMD 221
+LSL + +V DECH A +HPY +IMK + P++ G+TAS + G +
Sbjct: 162 GYLSLSDINLLVFDECHLAILDHPYREIMK-LCESCPSCPRILGLTAS--ILNGKCDPEE 218
Query: 222 CEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCG--SDLKGKLEVSWS 279
E +I +LE L S E T++ V + C CG +D G E
Sbjct: 219 LEEKIQKLERILRSDA---ETATDLVVLDRYTSQPCEIVVD---CGPFTDRSGLYERLLM 272
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKIL----YCLDELGLICAYEAVKI 335
+ +A+L + + + D ++ LSD A ++ +C D++ + E
Sbjct: 273 ELEAALDFINDCNVAVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRE---- 328
Query: 336 CLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYI 395
L+K +K ++E E++R+ L F + +L I + L ++ F ++DL Y+
Sbjct: 329 -LQKYIKHEQE-ELHRKFLL----FTDTLLRKIHA---LCEEYF------SPASLDLKYV 373
Query: 396 STKLHELLQLFLSF---------------------------------------------- 409
+ K+ +LL++ +
Sbjct: 374 TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 433
Query: 410 --GKSTQVLC-IIFVERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV 462
T +LC IIFVER A V+ R +K+ P L +++ ++TG + K
Sbjct: 434 FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 493
Query: 463 -------QKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRA 515
Q+EVL FR + NLL AT V+EEG+ +P C+ V+RFDLP SY+QS+GRA
Sbjct: 494 MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553
Query: 516 RQHNSQFILM--LERSERSVTDTALSRDPEACFLKACTYVKTKS---------------- 557
R S ++++ ++ + D + E C+ +
Sbjct: 554 RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 613
Query: 558 YIV--ESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA-YECELTLPSNA 614
Y++ + G VT ++++ I+RYC LPSD + P + + + + L LP N+
Sbjct: 614 YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINS 673
Query: 615 PFQ-TIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKN 669
P + +IVGP + L++++V L CEKLH++G L++HL+P +V+ E +L ++
Sbjct: 674 PLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEE 733
Query: 670 ESLPG-AGTTKRKELH 684
S+PG G+TKR++ +
Sbjct: 734 TSVPGRPGSTKRRQCY 749
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 1014 LPSVMQRLESL--MLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGD 1071
+P++M +++L + S+ + SR LIL+ALT + F++ERLE+LGD
Sbjct: 1261 MPAMMNAVKALKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD 1320
Query: 1072 SVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPR-RW 1130
S LK+A++ +LF TYP HEG+LS RS V N L++LG + L + S FDP W
Sbjct: 1321 SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW 1380
Query: 1131 VAPG 1134
+ PG
Sbjct: 1381 LPPG 1384
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW+++ P++ P++ +P P+REL+E+
Sbjct: 1799 PKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELLEMEPET 1858
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1859 AKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1910
Query: 1427 KRI 1429
++
Sbjct: 1911 PQV 1913
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS--- 974
+P + +TF Y+ KY + L + QPLL + + + NLL + N G +
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 975 GKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
K + Q + PEL +P S+ + LPS++ RL L+ A +LR +
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQ 1073
>sp|A1DE13|DCL1_NEOFI Dicer-like protein 1 OS=Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / FGSC A1164 / NRRL 181) GN=dcl1 PE=3 SV=1
Length = 1538
Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 189/646 (29%), Positives = 322/646 (49%), Gaps = 79/646 (12%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKD-IAQAI--KSNGF-KKLIIFLAP 101
PR YQ+++FE AK +NTIAVL+TG+GKT+IAV+L++ I + ++NG ++ FL
Sbjct: 127 PREYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDNRANGKPHRVSFFLVD 186
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V L +QQ V+R + D V ++GA G D WD + W + + +N V+V T +IL L
Sbjct: 187 SVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDEHLQRNMVIVCTAEILNQCLLN 246
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSD--NKPKVFGMTASPVVRKGVSSA 219
+++ +D + ++ DE HHA +HPY +I+++ Y K+ +P+VFGMTASP+ KG
Sbjct: 247 SYVKMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG---- 302
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWS 279
D + LE+ LDS++ T T + V E Y+ +LE S
Sbjct: 303 -DITEAATRLETLLDSRIATTSKITLLREVVSRPIEKVWAYN-----------RLE---S 347
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEK 339
F L YK MD ++ + K L + + ELG C+ A L
Sbjct: 348 PFATEL----------YKLMDTRYGNI-KVLEGVYRFAWHASSELGKWCSDRAWWHALAD 396
Query: 340 VLKAQEECEIYR---QSSLQCKY--FLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGY 394
+ + E I + ++L ++ ++++ + ++ + + F D G
Sbjct: 397 DVLPKLEGNISKLVESNTLNAEHGAVFKDIIRIREASETVKNYSFADPELP-------GE 449
Query: 395 ISTKLHELLQLFLS--FGKSTQVLCIIFVERIIAAKVVERF--VKKVPFLT-HLTVAYLT 449
+S K+ +LL++ LS F +T CI+F ++ AK++ V +P L + +
Sbjct: 450 LSPKV-QLLRMELSKHFSDTTGTKCIVFTQKRYTAKILNELFTVLNIPHLRPGVLIGVRP 508
Query: 450 GSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYI 509
G ++ +T + Q L FR G++N LFAT V EEG+ +P+C+ V+RFDL +T+ Y+
Sbjct: 509 GDIGGMN-VTFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQYV 567
Query: 510 QSRGRARQHNSQFILMLERSERSVTDTALS--RDPEACFLKACTYVK------------- 554
QSRGRAR S + +M+E+ + + + L R+ E + C +
Sbjct: 568 QSRGRARHCTSTYAIMVEK-DNAEHEGRLKEIREAEKIMQRFCETLPEDRILHGNDHDLD 626
Query: 555 --------TKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYEC 606
+++ V+STGA +T S++ ++ RY L +K P+ + AY C
Sbjct: 627 SLLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVGHVSNAYVC 686
Query: 607 ELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHL 652
E+ LP +P + + G + K ++KQ + C L + L+D+
Sbjct: 687 EVILPEKSPIRGLTGSPAIRKAVAKQSAAFDTCLLLRKHRLLDDYF 732
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 158/434 (36%), Gaps = 118/434 (27%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P S+V + P+++ RL+S ++A + C I LEA T
Sbjct: 1021 IPTSIVSTCLAFPAIISRLDSYLIALEA-----CDELELVIRPDFALEAFTKDSDNTEEH 1075
Query: 1054 -------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
G +++ ERLE LGD LK A S L+ P E R +CN
Sbjct: 1076 RGQQIHFQRGMGKNY--ERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKN 1133
Query: 1107 LHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVV 1166
L +++ YIR F W P L+L L GK ++
Sbjct: 1134 LFNTAIKKQIYRYIRSRGFSRHIWY-PDGLTL---------------LHGKDHSK----- 1172
Query: 1167 VGKPCDMGHRWMGSKTIADCAEALIGAYYVGGG----LIAALYMMKWLGIDADLEVSLVD 1222
K G +G KTIAD EALIGA + GG A + L VS
Sbjct: 1173 --KLLSEGKHALGEKTIADVCEALIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWK 1230
Query: 1223 DCITRASLRSYV---PRINE---IKDIESKIGYEFTVKFLLQEAITHASVQEFY-----C 1271
+ IT ++ Y PR +E + +E ++GY FT LL AITH S+ + C
Sbjct: 1231 EYITLYTMPKYQTEKPRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPC 1290
Query: 1272 YQNL--------------------------------------------------YKHLQH 1281
YQ L ++ +
Sbjct: 1291 YQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMA 1350
Query: 1282 CSTLLLSQITEYVKSFPKPGETTDSGP------SMKAPKALGDLLESIVGAVLIDTKLNL 1335
S L +QIT YV+ + + G + PK L D++E+ +GA+ +D+K +
Sbjct: 1351 FSNPLQAQITHYVEEI-ESAQAESRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDF 1409
Query: 1336 DEVWRIFKPILSPI 1349
+ F+ + P
Sbjct: 1410 QVIEVFFERQIKPF 1423
>sp|Q2U6C4|DCL1_ASPOR Dicer-like protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl1 PE=3 SV=2
Length = 1523
Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 213/783 (27%), Positives = 358/783 (45%), Gaps = 90/783 (11%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQ---AIKSNGFK-KLIIFLAP 101
PR YQ+++FE AK +NTIAVL+TG+GKT+IAV+L+K I Q ++NG ++ FL
Sbjct: 116 PREYQVELFERAKSQNTIAVLDTGSGKTLIAVLLLKHIIQNELIDRANGKPPRISFFLVD 175
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V L QQ V+R + D V +++GA G D W Q W + N V+V T +IL L
Sbjct: 176 SVTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQCLLN 235
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSD--NKPKVFGMTASPVVRKGVSSA 219
+++ +D + ++ DE HH +HPY +I++E Y K+D +P++FGMTASP+ KG
Sbjct: 236 SYIRMDQINLLIFDEAHHTKKDHPYARIIRESYLKADPTKRPRIFGMTASPIDTKG---- 291
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWS 279
D ++LE LDS++ T + V E YD KL+ ++
Sbjct: 292 -DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEYD-----------KLDPPFA 339
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEK 339
+KL + D+ R L ELG CA A L
Sbjct: 340 ------TKLYQILQARFGDISSLQPVFRFTLQ--------ASSELGPCCADRAWAYALAD 385
Query: 340 VLKAQEECEIYRQSSL------QCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLG 393
+ + E + + + QC L+E+ S + A I + F+ G
Sbjct: 386 DVLPKLEGNVRKLAQSISSPIPQCA--LKEI-----SRIQEASDIVKNHSFNSPNVP--G 436
Query: 394 YISTKLHELLQ-LFLSFGKSTQVLCIIFVERIIAAKVVERFVK--KVPFLT-HLTVAYLT 449
+S K+ L Q L F T+ CI+F ++ AK++ ++P+L + + +
Sbjct: 437 ELSPKVQLLRQKLIKYFEHPTKTKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVLIGVRS 496
Query: 450 GSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYI 509
G ++ ++ + Q L FR G++N LFAT V EEG+ +P+C+ V+RFDL T+ Y+
Sbjct: 497 GDIVGMN-VSFRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTLIQYV 555
Query: 510 QSRGRARQHNSQFILMLERSERSVTDTALS-RDPEACFLKACTYV--------------- 553
QSRGRAR +S + M+ER + R+ E C +
Sbjct: 556 QSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILHGIDSEIDS 615
Query: 554 ------KTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECE 607
+ +++I+ +TGA +T S++ ++ RY L +K + + + ++ CE
Sbjct: 616 ILQGEEEKRTFIIRATGAKLTYHSALAILARYASSLQYEKETSAQATYVVLPQNNSFVCE 675
Query: 608 LTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISK 667
+ LP +P + + G + K+ +KQ + C L + L+DH L +
Sbjct: 676 VILPEKSPVRGLTGVPASKKSAAKQSAAFDTCVLLRKHKLLDDHF----NSVYHRRLPAM 731
Query: 668 KNESLPGAGTTKRKELHGTTPIRALSGRWGEKCGVI---LHAYKFNFACSIVTEIYSGFV 724
+N L A T+ R + +L WG++ G + L A +F S +
Sbjct: 732 RNARL--AITSSRTNQYDMLSKPSL---WGKQQGTLPEKLFATVISFIPSEPLRRRHRSI 786
Query: 725 LLIESELDNDVGNFELELYLVSKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLFGKL 784
+L+ E D +F + L +T+ T S +H+ + ++ F F+ +F K
Sbjct: 787 ILLTRERLPDFPSFTIFLDDDIETIVVTESVEEALHISSQELEYLSTFTFRIFHDVFHKT 846
Query: 785 FVK 787
+ +
Sbjct: 847 YAE 849
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 149/434 (34%), Gaps = 131/434 (30%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P + S P+++ RL++ ++A + C + + + LEA T
Sbjct: 1008 IPEEIAASCLAFPAIINRLDAYLIALE-----GCKTLDLSVKPEYALEAFTKDSDNTEEH 1062
Query: 1054 -------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
G +++ ERLE LGD LK A S LF+ P E R +CN
Sbjct: 1063 RVQQIHVQRGMGKNY--ERLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKN 1120
Query: 1107 LHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVV 1166
L ++L Y R F W P L+L L G+ D +
Sbjct: 1121 LFNTALKKELYQYTRSRGFSRHTWY-PDGLTL---------------LHGR----DHRKK 1160
Query: 1167 VGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCIT 1226
+ R KT+AD EALIGA + GGL M A V+ V D
Sbjct: 1161 ISAESKHALR---EKTVADVCEALIGASLLSGGLHNQFDM-------AVKAVTAVVDSPN 1210
Query: 1227 RASL------RSYV--------PRINEI---KDIESKIGYEFTVKFLLQEAITHASVQEF 1269
+L SY+ P E+ + +E K+GY F LL A TH S
Sbjct: 1211 HKALCWADYTSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPST 1270
Query: 1270 Y----CYQN--------------------------------------------------L 1275
+ CYQ L
Sbjct: 1271 WAKVPCYQRLEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGL 1330
Query: 1276 YKHLQHCSTLLLSQITEYVKSFPKPGETTDSGP------SMKAPKALGDLLESIVGAVLI 1329
+ HL+H S L SQIT Y + + E G + PK L D++E+ +GA +
Sbjct: 1331 HTHLRHFSNPLQSQITHYAEEI-QAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFV 1389
Query: 1330 DTKLNLDEVWRIFK 1343
D+ V F+
Sbjct: 1390 DSDFQFRVVEDFFQ 1403
>sp|Q4WVE3|DCL1_ASPFU Dicer-like protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=dcl1 PE=3 SV=3
Length = 1537
Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 182/632 (28%), Positives = 313/632 (49%), Gaps = 77/632 (12%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKD-IAQAI--KSNG-FKKLIIFLAP 101
PR YQ+++FE AK +NTIAVL+TG+GKT+IAV+L++ I + ++NG ++ FL
Sbjct: 126 PREYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVD 185
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V L +QQ V+R + D V ++GA G D WD + W K + +N V+V T +IL L
Sbjct: 186 SVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLN 245
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSD--NKPKVFGMTASPVVRKGVSSA 219
+++ +D + ++ DE HHA +HPY +I+++ Y K+ +P+VFGMTASP+ KG
Sbjct: 246 SYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG---- 301
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWS 279
D + LE+ LDS++ T T + V E Y+ +LE ++
Sbjct: 302 -DITEAATRLETFLDSRIATTSKITLLREVVSRPIEKVWAYN-----------RLEPPFA 349
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEK 339
YK MD ++ + K L + ELG C+ A L
Sbjct: 350 T-------------ELYKLMDTRYGNI-KVLEGVYRFAWNASSELGKWCSDRAWWHALAD 395
Query: 340 VLKAQEECEIYR---QSSLQCKY--FLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGY 394
+ + E I + ++++ ++ ++++ + ++ + + F D G
Sbjct: 396 DVLPKLEGNINKLIESNTMKAEHGAVFKDIIRIREASETVKNYFFTDPELP-------GE 448
Query: 395 ISTKLHEL-LQLFLSFGKSTQVLCIIFVERIIAAKVVERF--VKKVPFLT-HLTVAYLTG 450
+S K+ L ++L F +T CI+F ++ AK++ V +P L + + G
Sbjct: 449 LSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIPNLRPGVLIGVRPG 508
Query: 451 STTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQ 510
++ +T + Q L FR G++N LFAT V EEG+ +P+C+ VIRFDL +T+ Y+Q
Sbjct: 509 DIGGMN-ITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQ 567
Query: 511 SRGRARQHNSQFILMLERSERSVTDTALS--RDPEACFLKACTYVK-------------- 554
SRGRAR S + +M+E+ + + + L R+ E + C +
Sbjct: 568 SRGRARHCTSTYAIMVEK-DNAEHEGRLKEIREAENIMRRFCEILPEDRILHGNDHDLDS 626
Query: 555 -------TKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECE 607
+++ V+STGA +T S++ ++ RY L +K P+ + A AY CE
Sbjct: 627 FLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVTIASNAYVCE 686
Query: 608 LTLPSNAPFQTIVGPTSRNKNLSKQLVCLEAC 639
+ LP +P + + G + K ++K+ + C
Sbjct: 687 VILPEKSPIRGLTGSPAMRKAVAKRSAAFDTC 718
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 156/434 (35%), Gaps = 118/434 (27%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P S+V + P+++ RL+S ++A + C I LEA T
Sbjct: 1020 LPPSIVSTCLAFPAIISRLDSYLIALEA-----CDELELVIRPDFALEAFTKDSDNTEEH 1074
Query: 1054 -------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
G +++ ERLE LGD LK A S LF P E R +CN
Sbjct: 1075 RGQQIHFQRGMGKNY--ERLEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKN 1132
Query: 1107 LHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVV 1166
L +++ YIR F W P L+L L GK TK++
Sbjct: 1133 LFNTAIKKQIYRYIRSRGFSRHIWY-PDGLTL---------------LHGK--DHSTKLL 1174
Query: 1167 VGKPCDMGHRWMGSKTIADCAEALIGAYYVGGG----LIAALYMMKWLGIDADLEVSLVD 1222
G +G KTIAD EALIGA + GG A + L VS
Sbjct: 1175 -----SEGKHALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWK 1229
Query: 1223 DCITRASLRSYVPRINE------IKDIESKIGYEFTVKFLLQEAITHASVQEFY-----C 1271
+ IT +L Y + + +E ++GY FT LL AITH S+ + C
Sbjct: 1230 EYITLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPC 1289
Query: 1272 YQNL--------------------------------------------------YKHLQH 1281
YQ L ++ +
Sbjct: 1290 YQRLEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMA 1349
Query: 1282 CSTLLLSQITEYVKSFPKPGETTDSGP------SMKAPKALGDLLESIVGAVLIDTKLNL 1335
S L +QIT YV+ + + G + PK L D++E+ +GA+ +D+K +
Sbjct: 1350 FSNPLQAQITHYVEEI-ETAQAESQGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDF 1408
Query: 1336 DEVWRIFKPILSPI 1349
+ F+ + P
Sbjct: 1409 QVIEAFFERQIKPF 1422
>sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseus GN=DICER1 PE=2 SV=3
Length = 1917
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 205/736 (27%), Positives = 347/736 (47%), Gaps = 123/736 (16%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKS--NGFKKLIIFLAP 101
+ PR YQ+++ E A NTI L TG+GKT IAV+L K++A I+ N K +FL
Sbjct: 42 YTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKRTVFLVN 101
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+ + V QQ +R H+D +V EY + W + W +E K+ VL+MT + L+ L+
Sbjct: 102 SANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKN 161
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMD 221
+LSL + +V DECH A +HPY +IMK + P++ G+TAS + G +
Sbjct: 162 GYLSLSDINLLVFDECHLAILDHPYREIMK-LCESCPSCPRILGLTAS--ILNGKCDPEE 218
Query: 222 CEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCG--SDLKGKLEVSWS 279
E +I +LE L S E T++ V A + C CG +D G E
Sbjct: 219 LEEKIQKLEKILKSNA---ETATDLVVLDRYASQPCEIVVD---CGPFTDRSGLYERLLM 272
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKIL----YCLDELGLICAYEAVKI 335
+ + +++ + ++ + D ++ LSD A ++ +C D++ + E
Sbjct: 273 ELEEAINFINDCNVSVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRE---- 328
Query: 336 CLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYI 395
L+K +K ++E E++R+ L F + +L I + L ++ F ++DL Y+
Sbjct: 329 -LQKYIKHEQE-ELHRKFLL----FTDTLLRKIHA---LCEEHF------SPASLDLKYV 373
Query: 396 STKLHELLQLFLSF---------------------------------------------- 409
+ K+ +LL++ +
Sbjct: 374 TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 433
Query: 410 --GKSTQVLC-IIFVERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV 462
T +LC IIFVER A V+ R +K+ P L +++ ++TG + K
Sbjct: 434 FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 493
Query: 463 -------QKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRA 515
Q+EVL FR + NLL AT V+EEG+ +P C+ V+RFDLP SY+QS+GRA
Sbjct: 494 MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553
Query: 516 RQHNSQFILM--LERSERSVTDTALSRDPEACFLKACT----------------YVKTKS 557
R S ++++ ++ + D + E C+
Sbjct: 554 RAPISNYVMLADTDKIQSFEEDLKTYKAIEKILRNKCSKSVDGAEADVDAVVDDDDVFPP 613
Query: 558 YIV--ESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA-YECELTLPSNA 614
Y++ + G VT ++++ ++RYC LPSD + P + + + + L LP N+
Sbjct: 614 YVLRPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTQELPDGTFYSTLYLPINS 673
Query: 615 PFQ-TIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKN 669
P + +IVGP L++++V L CEKLH++G L++HL+P +V+ E +L ++
Sbjct: 674 PLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEE 733
Query: 670 ESLPG-AGTTKRKELH 684
S+PG G+TKR++ +
Sbjct: 734 TSVPGRPGSTKRRQCY 749
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 1014 LPSVMQRLESL--MLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGD 1071
+P+VM +L + S+ SR LIL+ALT + F++ERLE+LGD
Sbjct: 1261 MPAVMSAGRALKDRMDSEQSPSAGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD 1320
Query: 1072 SVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPR-RW 1130
S LK+A++ +LF TYP HEG+LS RS V N L++LG + L + S FDP W
Sbjct: 1321 SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW 1380
Query: 1131 VAPG 1134
+ PG
Sbjct: 1381 LPPG 1384
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW+++ P++ P++ +P P+REL+E+
Sbjct: 1800 PKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1859
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1860 AKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1911
Query: 1427 KRI 1429
++
Sbjct: 1912 PQV 1914
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS--- 974
+P + +TF Y+ KY + L + QPLL + + + NLL + N G +
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 975 GKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
K + Q + PEL +P S+ + LPS++ RL L+ A +LR +
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQ 1073
>sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3
Length = 1922
Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 210/726 (28%), Positives = 346/726 (47%), Gaps = 103/726 (14%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFK--KLIIFLAP 101
+ PR YQ+++ E A NTI L TG+GKT IAV+L K+++ I+ + + K +FL
Sbjct: 42 YTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVN 101
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+ + V QQ +R H+D +V EY + W + W +E K+ VL+MT + L+ L+
Sbjct: 102 SANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKN 161
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMD 221
+LSL + +V DECH A +HPY +IMK + P++ G+TAS + G +
Sbjct: 162 GYLSLSDINLLVFDECHLAILDHPYREIMK-LCENCPSCPRILGLTAS--ILNGKCDPEE 218
Query: 222 CEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCG--SDLKGKLEVSWS 279
E +I +LE L S E T++ V + C CG +D G E
Sbjct: 219 LEEKIQKLEKILKSNA---ETATDLVVLDRYTSQPCEIVVD---CGPFTDRSGLYERLLM 272
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKIL----YCLDELGLICAYEAVKI 335
+ + +L+ + ++ + D ++ LSD A ++ +C D++ + E
Sbjct: 273 ELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRE---- 328
Query: 336 CLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYI 395
L+K +K ++E E++R+ L FL ++ + A LD F K + L I
Sbjct: 329 -LQKYIKHEQE-ELHRKFLLFTDTFLRKIHALCEEHFSPAS---LDLKFVTPKVIKLLEI 383
Query: 396 STKL--HELLQL-------------FLSFGKS-----------------------TQVLC 417
K +E Q ++S+ S T +LC
Sbjct: 384 LRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILC 443
Query: 418 -IIFVERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV-------QKE 465
IIFVER A V+ R +K+ P L +++ ++TG + K Q+E
Sbjct: 444 GIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEE 503
Query: 466 VLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILM 525
VL FR + NLL AT ++EEG+ +P C+ V+RFDLP SY+QS+GRAR S +I++
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIML 563
Query: 526 --LERSERSVTDTALSRDPEACFLKACT-YVKT---------------KSYIV--ESTGA 565
++ + D + E C+ V T Y++ + G
Sbjct: 564 ADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYVLRPDDGGP 623
Query: 566 SVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA-YECELTLPSNAPFQ-TIVGPT 623
VT ++++ I+RYC LPSD + P + + + + L LP N+P + +IVGP
Sbjct: 624 RVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPP 683
Query: 624 SRNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKNESLPG-AGTT 678
L++++V L CEKLH++G L+DHL+P +V+ E +L ++ S+PG G+T
Sbjct: 684 MSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGST 743
Query: 679 KRKELH 684
KR++ +
Sbjct: 744 KRRQCY 749
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 1026 LASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLT 1085
+ S+ I SR LIL+ALT + F++ERLE+LGDS LK+A++ +LF T
Sbjct: 1275 MDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCT 1334
Query: 1086 YPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPR-RWVAPG 1134
YP HEG+LS RS V N L++LG + L + S FDP W+ PG
Sbjct: 1335 YPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPG 1384
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW+++ P++ P++ +P P+REL+E+
Sbjct: 1805 PKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1864
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1865 AKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1916
Query: 1427 KRI 1429
++
Sbjct: 1917 PQV 1919
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS--- 974
+P + +TF Y+ KY + L + QPLL + + + NLL + N G +
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 975 GKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
K + Q + PEL +P S+ + LPS++ RL L+ A +LR +
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQ 1073
>sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus GN=DICER1 PE=2 SV=3
Length = 1923
Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 214/744 (28%), Positives = 349/744 (46%), Gaps = 105/744 (14%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKS--NGFKKLIIFLAP 101
+ PR YQ+++ E A NTI L TG+GKT IAV+L K+++ I+ N K +FL
Sbjct: 42 YTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVN 101
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+ + V QQ +R H+D +V EY + W + W +E K+ VL+MT + L+ L+
Sbjct: 102 SANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLIMTCYVALNVLKN 161
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMD 221
+LSL + +V DECH A +HPY +IMK + P++ G+TAS + G +
Sbjct: 162 GYLSLSDINLLVFDECHLAILDHPYREIMK-LCENCPSCPRILGLTAS--ILNGKCDPEE 218
Query: 222 CEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCG--SDLKGKLEVSWS 279
E +I +LE L S E T++ V + C CG +D G E
Sbjct: 219 LEEKIQKLEKILKSNA---ETATDLVVLDRYTSQPCEIVVD---CGPFTDRSGLYERLLM 272
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKIL----YCLDELGLICAYEAVKI 335
+ + +L+ + ++ + D ++ LSD A ++ +C D++ + E
Sbjct: 273 ELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRE---- 328
Query: 336 CLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYI 395
L+K +K ++E E++R+ L FL ++ + A LD F K + L I
Sbjct: 329 -LQKHIKHEQE-ELHRKFLLFTDTFLRKIHALCEEHFSPAS---LDLKFVTPKVIKLLEI 383
Query: 396 STKL--HELLQL-------------FLSFGKS-----------------------TQVLC 417
K +E Q ++S+ S T +LC
Sbjct: 384 LRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNFPSPFTNILC 443
Query: 418 -IIFVERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV-------QKE 465
IIFVER A V+ R +K+ P L +++ ++TG + K Q+E
Sbjct: 444 GIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEE 503
Query: 466 VLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILM 525
VL FR + NLL AT ++EEG+ +P C+ V+RFDLP SY+QS+GRAR S ++++
Sbjct: 504 VLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVML 563
Query: 526 --LERSERSVTDTALSRDPEACFLKACT-YVKTKSYIVEST----------------GAS 566
++ + D + E C+ V T E G
Sbjct: 564 ADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEADTEPVVDDDDVFPPYVLRPEDGPR 623
Query: 567 VTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA-YECELTLPSNAPFQ-TIVGPTS 624
VT ++++ ++RYC LPSD + P + + + + L LP N+P + +IVGP
Sbjct: 624 VTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPM 683
Query: 625 RNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKNESLPG-AGTTK 679
L++++V L CEKLH++G L+DHL+P +V+ E +L ++ S+PG G+TK
Sbjct: 684 SCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTK 743
Query: 680 RKELH-GTTP--IRALSGRWGEKC 700
R++ + P +R R G+ C
Sbjct: 744 RRQCYPKAIPECLRESYPRPGQPC 767
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 72/123 (58%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW+++ P++ P++ +P P+REL+E+ +
Sbjct: 1806 PKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPEI 1865
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1866 TKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1917
Query: 1427 KRI 1429
++
Sbjct: 1918 PQV 1920
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 1038 SRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVLKYAV-SCHLFLTYPKKHEGQLSA 1096
SR LIL+ALT + F++ERLE+LGDS LK+A+ + L HEG+LS
Sbjct: 1287 SRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSY 1346
Query: 1097 RRSWAVCNSTLHKLGTDRKLQGYIRDSAFDP 1127
RS V N L++LG + L + S FDP
Sbjct: 1347 MRSKKVSNCNLYRLGKKKGLPSRMVVSIFDP 1377
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS--- 974
+P + +TF Y+ KY + L + QPLL + + + NLL + N G +
Sbjct: 954 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1013
Query: 975 GKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
K + Q + PEL +P S+ + LPS++ RL L+ A +LR +
Sbjct: 1014 SSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQ 1072
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 77/215 (35%), Gaps = 69/215 (32%)
Query: 1145 CGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAAL 1204
CGVDT + + T+ + + K+IADC EAL+G Y G AA
Sbjct: 1536 CGVDTGKQSISYDLHTE--------------QCIADKSIADCVEALLGCYLTSCGERAAQ 1581
Query: 1205 YMMKWLGIDADLEVSLVDD----CITR-------------------ASLRSYV------- 1234
+ LG+ + D C TR A R+ V
Sbjct: 1582 LFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGYRASVLKDLEYG 1641
Query: 1235 -----PR---------------INEIKDIESKIGYEFTVKFLLQEAITHASVQEFYCYQN 1274
PR I+ ++ E KI Y F K L +A THAS + +
Sbjct: 1642 CLKIPPRCMFDHPEADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYH-YNTITD 1700
Query: 1275 LYKHLQHCSTLLLSQ-ITEYVKSFPK---PGETTD 1305
Y+ L+ +L IT+++ P+ PG TD
Sbjct: 1701 CYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTD 1735
>sp|A4RKC3|DCL1_MAGO7 Dicer-like protein 1 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL1 PE=3 SV=2
Length = 1591
Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 193/651 (29%), Positives = 322/651 (49%), Gaps = 83/651 (12%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQ----AIKSNGFKKLIIFLAP 101
PR YQ+++FE AK++NTIAVL+TG GKT+IA++LI+ I + A K++ FL
Sbjct: 108 PREYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHIIELELGARWQGREKRITFFLVD 167
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDS-QCWQKEINKNDVLVMTPQILLDALR 160
V LV QQ D IR + DF V +G + W S + ++K + + +V+V T +IL L
Sbjct: 168 KVALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYRCLH 227
Query: 161 KAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDN---KPKVFGMTASPVVRKGVS 217
+++L++ V +V DE HHA NH Y +I+K+FY ++ +P++FGMTASP+ K
Sbjct: 228 RSYLNISQVSLVVFDEAHHAKKNHVYARIIKDFYLMEEDCQKRPRIFGMTASPIDTK--D 285
Query: 218 SAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVS 277
+ + E ELES L S++ TI D+ ++V +E + Y
Sbjct: 286 TCISYERATHELESLLHSEIATISDRDLLKVIGSRPQEVRKSY----------------- 328
Query: 278 WSKFDASLSKLQGSQL-NCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKIC 336
A + + + ++L N +++ H ++ + + ELG CA + ++C
Sbjct: 329 -----ARVLRQENTELCNQLRELVGNHPLFKQTFDSAE----FAVTELGAWCADKLWELC 379
Query: 337 LEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYIS 396
+ + + + S + + E H + +A + + L + +S D G +S
Sbjct: 380 FREEAVSTLDGRV-EGSRARDPDEVGESSHEVSNA---REALSLVQQWSFSPPED-GSLS 434
Query: 397 TKLHELLQL----FLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTH---LTVAYLT 449
TK H+L+++ F + CI+FV+R A ++ ++ T L A+L
Sbjct: 435 TKTHKLIEILAECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDLKGAFLI 494
Query: 450 GSTTSVDA--LTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSS 507
G+ +A T + Q++ + FR G++N LFAT + EEG+ +P C+ VIRFDL T
Sbjct: 495 GAGRGGNAAFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQ 554
Query: 508 YIQSRGRARQHNSQFILMLE--------------RSERSVTDTALSRDPEACFLKACT-- 551
YIQSRGRAR NS FI M E +E+ + D LS + KA
Sbjct: 555 YIQSRGRARMRNSWFIHMTEFGNPEHNRRWFQDRVNEQKMRDFCLSLPKDRIMEKAEVDD 614
Query: 552 ----YVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPS--DKY----YTPKPIFKYKSAE 601
K ++V + AS+T S+ ++ + LP+ D+ YT P+F
Sbjct: 615 VLRGDQSQKIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILSVDYTVVPVFG----- 669
Query: 602 EAYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHL 652
++ E+ LP+++P ++ +G R+K L+K C +L+ L+DHL
Sbjct: 670 -GFQGEVYLPASSPLRSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 162/468 (34%), Gaps = 137/468 (29%)
Query: 981 GMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRN 1040
G N+ PQ ++ E L+ +P+ V Y P+++ RLE+ +++ + C +
Sbjct: 992 GENSTGPQT-CYLVLETLLISQIPVDTVVMAYTFPAIIYRLENSLISLEA-----CQNLG 1045
Query: 1041 FHIPSSLILEALT----------------TLGCCESFSMERLELLGDSVLKYAVSCHLFL 1084
IP + L A+T G +++ ERLE LGD LK A S L+
Sbjct: 1046 LDIPIDIALIAMTKDSDNSDDHDEAPINFQSGMGQNY--ERLEFLGDCFLKMATSIALY- 1102
Query: 1085 TYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCE 1144
T + E + R +CN L + LQ +IR +F+ R W PG
Sbjct: 1103 TLVEGDEFEYHVERMLDICNKNLLNWALESNLQEHIRSKSFNRRTWYPPG---------- 1152
Query: 1145 CGVDTLEVPLDGKFFTQDTKVVVGKPCDM-GHRWMGSKTIADCAEALIGAYYVGGG---- 1199
K++ GK ++ +G K+IAD EALIGA Y+
Sbjct: 1153 ------------------LKLLKGKKTEVDDEHALGDKSIADVCEALIGAAYLTAQAQSS 1194
Query: 1200 -----LIAALYMM---KWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEF 1251
+ A+ +M K + A + C S ++ I++K+GY F
Sbjct: 1195 PNFDLAVKAVTVMTHSKTHTMQAWSDYYASYQCPEWLSTPPSQTQLELCSQIKNKMGYRF 1254
Query: 1252 TVKFLLQEAITHASVQEFY----CYQNL-------------------------------- 1275
LL+ A H S Y YQ L
Sbjct: 1255 KNPRLLRCAFMHPSYPRQYENIPSYQRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHK 1314
Query: 1276 ------------------YKHLQHCSTLLLSQITEYVKSFPKPGETTDSGPSMKA----- 1312
++HL H L ITE+ + K E +
Sbjct: 1315 MAMVSNQFFGCVAVGLGFHRHLIHMQPALGGSITEWAELVTKKREEARQLAVRRGQREED 1374
Query: 1313 ------------PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSP 1348
PK L D+LE+ VGA+ +DT + V F + P
Sbjct: 1375 YARDFWIEVHHPPKCLPDILEAYVGALFVDTGYDYSAVVGFFDRHIKP 1422
>sp|A2RAF3|DCL1_ASPNC Dicer-like protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=dcl1 PE=3 SV=2
Length = 1525
Score = 246 bits (629), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 193/694 (27%), Positives = 330/694 (47%), Gaps = 93/694 (13%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFK----KLIIFLAP 101
PR YQL++FE AK +NTIAVL+TG+GKT+IAV+L+K + ++ + ++ FL
Sbjct: 117 PREYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVD 176
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V L +QQ V+R + D V ++GA G D W W + KN V+V T +IL L
Sbjct: 177 SVTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLN 236
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKS--DNKPKVFGMTASPVVRKGVSSA 219
+++ + + ++ DE HH +HPY +I+++ Y + +P++FGMTASP+ KG
Sbjct: 237 SYIKMSQINILIFDEAHHTKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG---- 292
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSWS 279
D + + LE LDS++ T + M + A+ +E W
Sbjct: 293 -DIVDEATRLEKLLDSRIATT---SNMSLLRQVARRP-----------------VERVW- 330
Query: 280 KFDASLSKL-QGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLE 338
S +KL Q + YK ++D+ + L ELG C+ A L
Sbjct: 331 ----SFNKLEQPFATSLYKHLEDRFGDM-ACLEGIFRFAWQASSELGRWCSDRAWARALA 385
Query: 339 KVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYISTK 398
+ + E + + ++ + + E + + A +I + F S G +S K
Sbjct: 386 DDVLPKLEGSVRKTANSETSSNVPESAYKEILRITEASEIVKSYAF--SSPETFGQLSPK 443
Query: 399 LHELL-QLFLSFGKSTQVLCIIFVERIIAAKVVERFVK--KVPFLT-HLTVAYLTGSTTS 454
+ L +L FG+ T+ CI+F ++ A ++ + +PFL + + +G
Sbjct: 444 VQVLREELARYFGRQTETKCIVFTQKRYTALILAELFQTLNIPFLRPGVLIGVRSGDLAG 503
Query: 455 VDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGR 514
++ +T + Q L FR G++N LFAT V EEG+ +P+C+ V+RFDL +T+ Y+QSRGR
Sbjct: 504 MN-ITFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRGR 562
Query: 515 ARQHNSQFILMLERSE-------RSVTDTALSRD-----PEACFLKACTY---------V 553
AR NS + M+ER V D + + PE L +
Sbjct: 563 ARHFNSTYASMVERGNLEHEQRLLEVQDAEMMQSFCRTLPEDRLLYGFDHDLDTVLQKDE 622
Query: 554 KTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSN 613
+++ ++STGA +T S+ ++ RY L +K ++ + + A+ CE+ LP
Sbjct: 623 GNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVLPINGAFVCEVILPEK 682
Query: 614 APFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHL-------LPSV---------E 657
+P + + G + K+++K+ + C L + L+DH LP++ +
Sbjct: 683 SPIRGLTGSPAMKKSIAKRSAAFDTCLLLRKNKLLDDHFNSIYHRRLPAMRNAKLAITSK 742
Query: 658 EPSENNLISK-----KNESLPGAGTTKRKELHGT 686
S+ ++ISK + + +P KELHGT
Sbjct: 743 RTSQYDMISKPSLWGRKQGMPP------KELHGT 770
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 154/433 (35%), Gaps = 117/433 (27%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P S S P+++ R+++ +++ Q C S NF + L LEA T
Sbjct: 1010 IPASTAFSCLAFPAIISRIDAYLISLQ-----GCESLNFTVKLDLALEAFTKDSDNTDEH 1064
Query: 1054 -------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
G ++ ERLE LGD LK A S LF P E R +CN
Sbjct: 1065 RAQQIHVQRGMGRNY--ERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKN 1122
Query: 1107 LHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVV 1166
L D+++ YIR F W G L L L GK ++
Sbjct: 1123 LFNAAVDKEIYKYIRSRGFSRHTWYPEG-LKL---------------LQGKDHSR----- 1161
Query: 1167 VGKPCDMGHRWMGSKTIADCAEALIGAYYVGGG----LIAALYMMKWLGIDADLEVSLVD 1222
K + KTIAD EALIGA + GG A+ + L +
Sbjct: 1162 --KATTESKHALAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSPSHKAERWK 1219
Query: 1223 DCITRASLRSYVPRINE------IKDIESKIGYEFTVKFLLQEAITHASVQEFY----CY 1272
D I+ ++ Y R + + IE K+ Y F LL A TH S + CY
Sbjct: 1220 DYISFYTIPKYQRRAADGAELYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCY 1279
Query: 1273 QN--------------------------------------------------LYKHLQHC 1282
Q L+ HL++
Sbjct: 1280 QRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYF 1339
Query: 1283 STLLLSQITEYVKSFPKPGETTDSGP------SMKAPKALGDLLESIVGAVLIDTKLNLD 1336
S L SQIT+Y + + E G + PK L D++E+ VGAV +D+ N +
Sbjct: 1340 SAPLQSQITQYAEEI-QTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFNFE 1398
Query: 1337 EVWRIFKPILSPI 1349
+ R F+ + P
Sbjct: 1399 VIERFFRDYIKPF 1411
>sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicalis GN=dicer1 PE=2 SV=2
Length = 1893
Score = 243 bits (620), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 217/731 (29%), Positives = 342/731 (46%), Gaps = 112/731 (15%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFK--KLIIFLAP 101
+ PR YQ+++ E A NTI L +G+GKT IAV+L K+++ I+ + K K +FL
Sbjct: 32 YTPRKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNTKRTVFLVN 91
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+ V QQ +R HTD +V EY + W + W E + VLVMT I L+ L+
Sbjct: 92 SEKQVSQQVSAVRTHTDLKVGEYSDQEKTQCWAKERWYLEFETHQVLVMTCHIFLNVLKS 151
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASPVVRKGVSSAMD 221
+SL + +V DECH A +HPY +IMK P++ G+TAS + G D
Sbjct: 152 GNVSLSNINLLVFDECHLAIQDHPYREIMK-ICESCQPCPRILGLTAS--ILNGKCDPRD 208
Query: 222 CEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGS--DLKGKLEVSWS 279
E +I +LE L S E T++ V A + C CG D G + +
Sbjct: 209 LEEKIQKLEEILRSNA---ETATDLVVLDRYASQPCEIVLD---CGPYIDKSGLYQRLLN 262
Query: 280 KFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKIL----YCLDELGLICAYEAVKI 335
+ D +L+ L ++ + D ++ LSD +L +C D++ + E
Sbjct: 263 ELDEALNFLIDCNISTHSKERDSTLISKQILSDCQTVLLVLGPWCADKVAGMMVRE---- 318
Query: 336 CLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIF----LDFGFDYSKAVD 391
L+K +K ++E E++R+ L F + +L I + L ++ F LD F K +
Sbjct: 319 -LQKYIKHEQE-ELHRKFLL----FTDTILRKIHA---LCEEHFSPASLDMKFVTPKVIK 369
Query: 392 LGYISTKL--HELLQL-------------FLSFGKS------------------------ 412
L I K +E Q ++S+ S
Sbjct: 370 LLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDEDEEIEEKEKTETSFPSPF 429
Query: 413 TQVLC-IIFVERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV----- 462
T +LC IIFVER A V+ R +K+ P L +++ ++TG + K
Sbjct: 430 TNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEVEF 489
Query: 463 --QKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNS 520
Q+EVL FR + NLL AT ++EEG+ +P C+ V+RFDLP SY+QS+GRAR S
Sbjct: 490 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKGRARAPIS 549
Query: 521 QFILMLERSERSVTDTALS--RDPEACFLKACTYV----KTKS------------YIVES 562
+I++ + + + L + E C+ T+S Y++
Sbjct: 550 NYIMLADSDKIKAFEEDLKTYKAIEKILRNKCSKSIDCGNTESEPIVDDDEIFPPYVLRQ 609
Query: 563 TGAS--VTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA-YECELTLPSNAPFQT- 618
S VT ++++ I+RYC LPSD + P K + + Y L LP N+P +
Sbjct: 610 DDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTREFPDGLYRSTLYLPINSPLRAP 669
Query: 619 IVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKNESLPG 674
IVGP L+ + V L C+KLH++G L+DHL+P +V+ E +L ++ S+PG
Sbjct: 670 IVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMPVGKETVKYEEELDLHDEEETSVPG 729
Query: 675 -AGTTKRKELH 684
G+TKR++ +
Sbjct: 730 RPGSTKRRQCY 740
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 1047 LILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
LIL+ALT + F++ERLE+LGDS LK+A++ +LF TYP HEG+LS RS V N
Sbjct: 1273 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1332
Query: 1107 LHKLGTDRKLQGYIRDSAFDPR-RWVAPGQL 1136
L++LG + + S FDP W+ PG +
Sbjct: 1333 LYRLGKKKGSPSRMVVSIFDPPVNWLPPGYI 1363
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW ++ P++ P++ +P P+REL+E+
Sbjct: 1776 PKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPRSPVRELLEMEPET 1835
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1836 AKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1887
Query: 1427 KRI 1429
++
Sbjct: 1888 SQV 1890
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 931 KTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS---GKGSKSGMNTK 985
+TF Y+ KY + L + QPLL + + + NLL + N G + K +
Sbjct: 960 ETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWE 1019
Query: 986 KPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
Q + PEL VP S+ + LPS++ RL L+ A +LR +
Sbjct: 1020 SLQNKQILVPELCAIHPVPASLWRKAVCLPSILYRLHCLLTAEELRAQ 1067
>sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus GN=DICER1 PE=2 SV=3
Length = 1921
Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 212/731 (29%), Positives = 342/731 (46%), Gaps = 113/731 (15%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFK--KLIIFLAP 101
+ PR YQ+++ E A NTI L TG+GKT IAV+L K+++ I+ + K K +FL
Sbjct: 42 YTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVN 101
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+ + V QQ +R H+D +V EY + + W + W +E +K+ VLVMT + L LR
Sbjct: 102 SANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRN 161
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMK--EFYHKSDNKPKVFGMTASPVVRKGVSSA 219
+LSL + +V DECH A +HPY +IMK E Y P++ G+TAS ++
Sbjct: 162 EYLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSC---PRILGLTAS-----ILNGK 213
Query: 220 MDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCG-----SDLKGKL 274
D +++ E T++ V + C CG S L G+L
Sbjct: 214 CDPAELEEKIKKLEKILKSNAETATDLVVLDRYTSQPCEIVVD---CGPYTDKSGLYGRL 270
Query: 275 EVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKIL----YCLDELGLICAY 330
+ D +L L ++ + D ++ LSD A ++ +C D++ +
Sbjct: 271 ---LRELDEALHFLNDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVR 327
Query: 331 EAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAV 390
E L+K +K ++E E++R+ L FL ++ + A LD F K +
Sbjct: 328 E-----LQKYIKHEQE-ELHRKFLLFTDTFLRKIHALCEEHFSPAS---LDLKFVTPKVI 378
Query: 391 DLGYISTKL--HELLQL-------------FLSFGKS----------------------- 412
L I K +E Q ++S+ S
Sbjct: 379 KLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPF 438
Query: 413 TQVLC-IIFVERIIAAKVVERFVKKV----PFLTHLTVAYLTGSTTSVDALTPKV----- 462
T +LC IIFVER A V+ R +K+ P L +++ ++TG + K
Sbjct: 439 TNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEVEF 498
Query: 463 --QKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNS 520
Q+EVL FR + NLL AT ++EEG+ +P C+ V+RFDLP SY+QS+GRAR S
Sbjct: 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPIS 558
Query: 521 QFILM--LERSERSVTDTALSRDPEACFLKACTYVKTKS----------------YIVES 562
+I++ ++ + D + E C+ S Y++ +
Sbjct: 559 NYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDDVFPPYVLRT 618
Query: 563 TGAS--VTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKS-AEEAYECELTLPSNAPFQ-T 618
S VT ++++ I+RYC LPSD + P K + + + L LP N+P + +
Sbjct: 619 DENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPLRAS 678
Query: 619 IVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLP----SVEEPSENNLISKKNESLPG 674
IVGP L++++V L CEKLH++G L+DHL+P +V+ E +L ++ S+PG
Sbjct: 679 IVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPG 738
Query: 675 -AGTTKRKELH 684
G+TKR++ +
Sbjct: 739 RPGSTKRRQCY 749
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 1047 LILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
LIL+ALT + F++ERLE+LGDS LK+A++ +LF TYP HEG+LS RS V N
Sbjct: 1297 LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN 1356
Query: 1107 LHKLGTDRKLQGYIRDSAFDPR-RWVAPGQL 1136
L++LG + L + S FDP W+ PG +
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDPPVNWLPPGYI 1387
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELP--PLRELIELCDSL 1370
PKA+GD+ ES+ GA+ +D+ ++L+ VW+++ P++ P++ +P P+REL+E+
Sbjct: 1804 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1863
Query: 1371 GYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQ----ERSRKAAKGKAASQLLKKLEVCE 1426
F T G ++R+ ++ +VG+G+ RS + AK AA + L+ L+ +
Sbjct: 1864 AKFSPAERTYDG-----KVRVTVE---VVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ 1915
Query: 1427 KRI 1429
++
Sbjct: 1916 PQV 1918
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 920 SPFDGNTDDDSKTFVNYFSEKYGIVLIHPGQPLLRLKQSHNPHNLLV--NFNDGGGS--- 974
+P + +TF Y+ KY + L + QPLL + + + NLL + N G +
Sbjct: 955 TPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPL 1014
Query: 975 GKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREE 1033
K + Q + PEL +P S+ + LPS++ RL L+ A +LR +
Sbjct: 1015 SSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQ 1073
>sp|P34529|DCR1_CAEEL Endoribonuclease dcr-1 OS=Caenorhabditis elegans GN=dcr-1 PE=1 SV=3
Length = 1910
Score = 237 bits (605), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 209/729 (28%), Positives = 347/729 (47%), Gaps = 103/729 (14%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKS--NGFKKLIIFLAP 101
F PR YQ+++ + A ++NTI L TG+GKT IAV+L+K+ + + + K F+
Sbjct: 11 FNPRDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKRAFFVVE 70
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDS--QCWQKEINKNDVLVMTPQILLDAL 159
V+LV QQ I VHT F+V + +G WDS QC Q + ++ V+V+T Q LLD +
Sbjct: 71 KVNLVEQQAIHIEVHTSFKVGQVHGQTSSGLWDSKEQCDQF-MKRHHVVVITAQCLLDLI 129
Query: 160 RKAFLSLDIVCFIVIDECHHATGN-HPYTKIMKEFYHKSDNKP--KVFGMTASPVVRKGV 216
R A+L ++ +C ++ DECHHA G+ HPY IM ++ +KP +V G+TAS +++ V
Sbjct: 130 RHAYLKIEDMCVLIFDECHHALGSQHPYRSIMVDYKLLKKDKPVPRVLGLTAS-LIKAKV 188
Query: 217 SSAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKES---CRFYDQSKFCGSDLKGK 273
+ E Q+ +LES +DS + T D + + E C+ ++ +
Sbjct: 189 APEKLME-QLKKLESAMDSVIETASDLVSLSKYGAKPYEVVIICKDFEIGCLGIPNFDTV 247
Query: 274 LEVSWSKFDASLSKLQGSQLNCYKDMD-DKHKTLRKQLSDYHAKILYCLDELGLICAYEA 332
+E+ FD +++ + + D+D D + ++ L A +LG A+
Sbjct: 248 IEI----FDETVA-FVNTTTEFHPDLDLDPRRPIKDSLKTTRA----VFRQLGPWAAWRT 298
Query: 333 VKIC---LEKVLKAQ-------EECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDF 382
++ L K++K+Q + + S + K LE + I S L
Sbjct: 299 AQVWEKELGKIIKSQVLPDKTLRFLNMAKTSMITIKRLLEPEMKKIKSIEALR------- 351
Query: 383 GFDYSKAVDLGYISTKLHELLQLFLSFG-----------KSTQVLCIIFV-ERIIAAKVV 430
Y+ ++ L ++ +F K+ + IIFV +R IA ++
Sbjct: 352 ----------PYVPQRVIRLFEILETFNPEFQKERMKLEKAEHLSAIIFVDQRYIAYSLL 401
Query: 431 --ERFVKKV-PFLTHLTVAYLTGST-----TSVDALTPKVQKEVLESFRGGKVNLLFATD 482
R +K P + Y+ G++ +S K Q EVL F ++N L AT
Sbjct: 402 LMMRHIKSWEPKFKFVNPDYVVGASGRNLASSDSQGLHKRQTEVLRRFHRNEINCLIATS 461
Query: 483 VIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALS--- 539
V+EEG+ V C+ VI+FD P + SY+QS+GRAR+ S++++ +E + + D+ L
Sbjct: 462 VLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGSRYVITVEEKDTAACDSDLKDFQ 521
Query: 540 -----------------RDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEM 582
D F + + + Y+VE TGA++ +++ LI+RYC
Sbjct: 522 QIEKILLSRHRTVNNPIEDDSDRFEEFDVDSQMEPYVVEKTGATLKMSTAIALINRYCSK 581
Query: 583 LPSDKYYTPKPIFKYKSAEE----AYECELTLPSNAPFQ--TIVGPTSRNKNLSKQLVCL 636
LPSD + P + EE Y EL LP N+P + ++ NK ++ V L
Sbjct: 582 LPSDIFTRLVPHNQIIPIEENGVTKYCAELLLPINSPIKHAIVLKNPMPNKKTAQMAVAL 641
Query: 637 EACEKLHQVGALNDHLLPSVEEPSE---NNLISKKNESLPG----AGTTKRKELHGTTPI 689
EAC +LH G L+D+LLP E ++ + +E PG G++KRK+L+
Sbjct: 642 EACRQLHLEGELDDNLLPKGRESIAKLLEHIDEEPDEYAPGIAAKVGSSKRKQLYDKKIA 701
Query: 690 RALSGRWGE 698
RAL+ + E
Sbjct: 702 RALNESFVE 710
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 61/288 (21%)
Query: 1047 LILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
L+L ALTT + S+ER E +GDS LK+A + +L+ T +HEG+LS RS V N
Sbjct: 1396 LLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKEVSNCN 1455
Query: 1107 LHKLGTDRKLQGYIRDSAFDPR-RWVAP----------------------------GQ-L 1136
L++LG + I + FD W+ P GQ +
Sbjct: 1456 LYRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEIERILDGQVI 1515
Query: 1137 SLRP-------------VPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTI 1183
+P G++T+ P + D + H + K+I
Sbjct: 1516 EEKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQH--ISDKSI 1573
Query: 1184 ADCAEALIGAYYVGGGLIAALYMMKWLGI-------DADLEVSLVDDCITRASLRSYVPR 1236
AD EALIG + + G L +M W+G+ +D+ L+ T + + +
Sbjct: 1574 ADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTNPNASLNF 1633
Query: 1237 IN------EIKDIESKIGYEFTVKFLLQEAITHASV---QEFYCYQNL 1275
+N + +E KIGY F + L +A THAS + CYQ L
Sbjct: 1634 LNNLWQQFQFTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRL 1681
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 1310 MKAPKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIV-----TPDKLELPPLRELI 1364
++ PKA+GD+ ES+ GA+ +D+ NLD W++ ++ + P + P+REL+
Sbjct: 1783 IEVPKAMGDIFESVAGAIYLDSGRNLDTTWQVIFHMMRGTIELCCANPPR---SPIRELM 1839
Query: 1365 ELCDSLGYFVKENCTLKGEMVHAELRLQLKDVLLVGEGQERSRKAAKGKAASQLLKKLEV 1424
E S F K L+ V + + + ++ G G R+ + AK AA + LK L
Sbjct: 1840 EFEQSKVRFSKMERILESGKVRVTVEV-VNNMRFTGMG--RNYRIAKATAAKRALKYLHQ 1896
Query: 1425 CEKRISKGASNT 1436
E++ + S T
Sbjct: 1897 IEQQRRQSPSLT 1908
Score = 40.8 bits (94), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 981 GMNTKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRN 1040
G+ + +P LL +D P + SL L ++ Q+ + +QL E+I +
Sbjct: 1601 GLKVIQKDQKSDVPSPLLRFIDTPTNPNASLNFLNNLWQQFQ----FTQLEEKIGYRFKE 1656
Query: 1041 FHIPSSLILEALT--------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEG 1092
+ +++A T GC +RLE LGD+VL Y ++ +LF + G
Sbjct: 1657 ----RAYLVQAFTHASYINNRVTGC-----YQRLEFLGDAVLDYMITRYLFEDSRQYSPG 1707
Query: 1093 QLSARRSWAVCNSTLHKLGTDRKLQGYI 1120
L+ RS V N+ L + Q +
Sbjct: 1708 VLTDLRSALVNNTIFASLAVKFEFQKHF 1735
Score = 34.7 bits (78), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 25/168 (14%)
Query: 889 DAKNLKDMVVLAIHTGR----IYSIVEIVNNSSAESPFDGNTDDDSKTFVNYFSEKYGIV 944
+A++ KD +V+ + Y + EI+ S F D +TF YF +KY +
Sbjct: 871 NAEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPSSKF---PDTHFETFNEYFIKKYKLE 927
Query: 945 LIHPGQPLLRLKQSHNPHNLLV-----------NFNDGGGSGKGSKSGMNTKKPQMHVH- 992
+ Q LL + + NLL ++ S S ++K+ V
Sbjct: 928 IYDQNQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNTSVPH 987
Query: 993 ------MPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREEI 1034
+ PEL+ + ++ + LPS+ R+ L+L +LRE I
Sbjct: 988 SSQRQILVPELMDIHPISATLWNVIAALPSIFYRVNQLLLTDELRETI 1035
>sp|Q0UI93|DCL1_PHANO Dicer-like protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL1 PE=3 SV=2
Length = 1522
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 198/679 (29%), Positives = 320/679 (47%), Gaps = 83/679 (12%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFK----KLIIFLAP 101
PR YQ+++F AK +NTIAVL+TG GKT IA +L++ + + N K K+ FL
Sbjct: 69 PRDYQMELFLRAKMQNTIAVLDTGTGKTHIATLLLRHVLEEELENRAKGCAHKMAFFLVD 128
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
+V+LV QQ +V+R D VE GA G + Q W K N V+V T Q+L+D +
Sbjct: 129 SVNLVFQQANVLRCGLDQGVEGISGAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMH 188
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFY-HKSDN--KPKVFGMTASPVVRKGVSS 218
+F+S+ + ++ DE HHA NHPY ++MK++Y H+ D +P++F MTASPV KG S
Sbjct: 189 SFMSISRMNLLIFDEAHHAKSNHPYARVMKDYYAHELDTSKRPRIFAMTASPVDVKG-QS 247
Query: 219 AMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSW 278
A ELE+ L S++ T D + +E Y + +
Sbjct: 248 AEHVREAARELETLLHSRIATTSDSALARNSITRPEEEVAVYTRLR-------------- 293
Query: 279 SKFDASLSKLQGSQLNCYKDMDDKHKTLRKQL--SDYHAKILYCLDELGLICA--YEAVK 334
++F+ L + ++ Y D+ RK + HA ELG + Y +
Sbjct: 294 NEFETPLHQKVKAK---YGDV----APFRKLFITAKLHAS------ELGRWASDMYWSFA 340
Query: 335 ICLEKVLKAQ--EECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDL 392
E+ K Q EE + R L+ + + A + + G DL
Sbjct: 341 FADEQSRKLQIREELKYNRSKRDWSAAELDAQMARLKEATAFVQQ--YEIGAPTLSEQDL 398
Query: 393 GYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKV--PFLTHLTVAYLTG 450
KL L L+ + ++T CI+FVE+ A++++ + P L H V
Sbjct: 399 SSKVMKLQYWLNLY--YERTTLARCIVFVEKRHTAQLLKLIFDHIGGPNL-HCDVLVGIN 455
Query: 451 STTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQ 510
+ + ++ + Q L+ FR G++N LFAT V EEG+ +P C+ V+RFDL +T+ Y+Q
Sbjct: 456 NRAGEENVSLRSQILTLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQ 515
Query: 511 SRGRARQHNSQFILMLERSERSVTDTAL-SRDPEAC---FLKACTYVKT----------- 555
SRGRAR NS+++ MLE + T+ + +R E F K T+ +
Sbjct: 516 SRGRARHRNSKYLHMLEAENKEHTERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAEL 575
Query: 556 --------KSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYT---PKPIFKYKSAEE-- 602
SY E +GA +T SS++++ + PS + T P + K +++
Sbjct: 576 IALEDKLFPSYTDEKSGAKLTYRSSLSILSHFVATYPSPDHNTMAQPTYVVNPKISDDPR 635
Query: 603 -----AYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVE 657
+ CE+ LP + P ++VG K ++K + C +L + LN+ LLP++
Sbjct: 636 DPQRNGFVCEVILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLPTIS 695
Query: 658 E--PSENNLISKKNESLPG 674
+ P+ N + +E G
Sbjct: 696 KYLPAMRNALLAVSEKKKG 714
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 198/554 (35%), Gaps = 149/554 (26%)
Query: 901 IHTGRIYSIVEIVNNSSAESPFDGNTDDDSKTFV----NYFSEKY----GIVLIHPGQPL 952
++ GR Y + + + P N + F+ ++ K+ I H QP+
Sbjct: 881 MNGGRRYYSDRLAPHLKPQDPVPANVPRQNHKFMKNILDFSDSKWMKSRDITRWHQDQPV 940
Query: 953 LRLKQSHNPHNLLVNFNDGGGSGKGSKSGMNTKKPQMHVHMPPELLVRVDVPISVVKSLY 1012
L++++ N L N D K K N + ++ PE L ++ V Y
Sbjct: 941 LQVEKIPFRRNHLANVED-----KEKKELAN-----LETYICPEPLHISNLATPFVVMCY 990
Query: 1013 LLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------------TLGCC 1058
+LP+++ R ES ++A C + + +L LEALT
Sbjct: 991 VLPAIIHRFESYLIALDA-----CDVLDLKVSPALALEALTKDSDNSEEHGEEKINFKSG 1045
Query: 1059 ESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGT-DRKLQ 1117
+ ERLE LGD LK A S +F+ P+++E + RR +CN L + +KL
Sbjct: 1046 MGPNYERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKLY 1105
Query: 1118 GYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRW 1177
Y+R AF R W G LR GK + + + ++ H
Sbjct: 1106 KYVRTDAFSRRNWYPEGLKLLR----------------GKGLKKTEEDWL----NVTHN- 1144
Query: 1178 MGSKTIADCAEALIGAYYV---GGGLIAALYMMKWLGIDADLEVSLV------DDCITRA 1228
+G K++AD EA IGA ++ GG +W D D V V DD +
Sbjct: 1145 LGDKSVADVCEAFIGAAFMQHHKGG--------QWTPNDWDEAVKAVKLFANSDDHLMEK 1196
Query: 1229 SLRSYVP--------------RINEIKDIESKIGYEFTVKFLLQEAITHAS--------- 1265
Y +++ IE K Y F LL+ A H S
Sbjct: 1197 WTDYYAAYTKPKYQTAGATATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWENIP 1256
Query: 1266 ------------------VQEFYCYQN---------------------------LYKHLQ 1280
+ FY Y + + H++
Sbjct: 1257 SYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHMK 1316
Query: 1281 HCSTLLLSQITEYVKSFPKPGETTDSGPSM-----KAPKALGDLLESIVGAVLIDTKLNL 1335
+ +L SQI +YV + + + PK L D++E+ V A+ +D++ +
Sbjct: 1317 QNTAILSSQIRDYVYEVEEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFDF 1376
Query: 1336 DEVWRIFKPILSPI 1349
+ V + F L P
Sbjct: 1377 NVVQKFFDLHLKPF 1390
>sp|Q2H0G2|DCL1_CHAGB Dicer-like protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DCL1 PE=3
SV=2
Length = 1607
Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 217/783 (27%), Positives = 351/783 (44%), Gaps = 90/783 (11%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKL----IIFLAP 101
PR YQL++FE AK +NTIAVL+TG+GKT+IA +L++ Q + K+L FL
Sbjct: 135 PRDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVD 194
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
V LV QQ+ V+ + D+ +E++ G V++ W K ++N +V T +IL L
Sbjct: 195 KVALVFQQHAVLACNLDYPLEKFCG-DMVEDVTQDFWHKTFDENMAIVCTAEILYQCLTH 253
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVF----GMTASPVVRKGVS 217
+++ +D V +V DE HH NHPY +I+K+FY + + K MTASPV
Sbjct: 254 SYIRMDQVNLLVFDEAHHTKKNHPYARIIKDFYAEVKDLNKRLRISRAMTASPV-----D 308
Query: 218 SAMDCE-GQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEV 276
+ +D + + ELE L SQ+ T+ D T + S K K EV
Sbjct: 309 AQIDPKIARSPELEGLLHSQIATVADPTALH-------------------NSSTKLKREV 349
Query: 277 SWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICA--YEAVK 334
+ ++ L + + KD+ +H+ +K A ELG CA Y +
Sbjct: 350 T-VEYGKCLPEFETGLNRALKDLVGEHRLFQKPF----AFTATAASELGPWCADRYWQLF 404
Query: 335 ICLEKVLK--AQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDL 392
E+V+K A+ E EI R+S+ + +E+ + A ++ F S + DL
Sbjct: 405 FRGEEVVKLEAKTEREILRKSA-----YSQEIAAQVNKVRE-AHRLVGQHEF-ASPSSDL 457
Query: 393 GYISTKLHELLQLFLS--FGKSTQVLCIIFV-ERIIAAKVVERFVKKVPFLTHLTVAYLT 449
+S+K+ LL++ G + CI+FV +R +A+ + + + + L L
Sbjct: 458 --LSSKVVILLRILRGEFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGLEPGILV 515
Query: 450 GS---TTSVDALTPKVQKEVLE--SFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKT 504
G S D + +VL F+ G++N +FAT V EEG+ +P+C+ +IR+DL T
Sbjct: 516 GGGRPEASYDNAKVTYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNT 575
Query: 505 VSSYIQSRGRARQHNSQFILMLE-RSERSVTDTALSRDPEACFLKACTYVKT-------- 555
+ YIQSRGRARQ S +I M+E +E V +++ E K C +
Sbjct: 576 LIQYIQSRGRARQEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEALPADRKLTGNN 635
Query: 556 -------------KSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEE 602
+ Y V TGA + S+ + + LP + S
Sbjct: 636 FDMEYFLRKEKDQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTAGYLVLSVPG 695
Query: 603 AYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSEN 662
Y+CE+TLP ++P ++ G +K ++K E C L + L+ HL P+ +
Sbjct: 696 GYQCEVTLPESSPIRSATGKVYASKAVAKCSAAYEMCLMLIKGKYLDQHLRPTFTK---- 751
Query: 663 NLISKKNESLPGAGTTKRKELHGTTPIRALSGRWGEKCGVILHAYKFNFACSIVTEIYSG 722
L + +N L A ++K+KE + L GE L A A +S
Sbjct: 752 QLPAMRNARL--AVSSKKKEQYKMRIKPELWSVLGEPTE--LFAMALTLADPTALARHSS 807
Query: 723 FVLLIESELDNDVGNFELELYLVSKTVKATVSSSGQVHLDADQMSKAKCFQELFFNGLFG 782
+LL+ + + +F L + V G+V LD +Q+ F +F
Sbjct: 808 PLLLLTRQPIPQIASFPLYFGKNRSSAVHCVPVPGRVELDDNQIQGLVAVTLAIFKDIFS 867
Query: 783 KLF 785
K +
Sbjct: 868 KEY 870
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 185/520 (35%), Gaps = 164/520 (31%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P+ +V Y P++M R++S ++A + C N ++ L LEA T
Sbjct: 1041 LPVDLVAMAYNFPAIMHRIDSNLVALEA-----CKMLNLNVRPDLALEAFTKDSDNSGEH 1095
Query: 1054 -----TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLH 1108
+ + ERLE LGD LK A + +F P K E + R +CN L
Sbjct: 1096 DAEQISFQSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLF 1155
Query: 1109 KLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVG 1168
+ KL+ +IR AFD R W G L+L+ G
Sbjct: 1156 NNALEVKLEEHIRSMAFDRRSWYPEG-LTLKK---------------------------G 1187
Query: 1169 KPCDMGHRW-MGSKTIADCAEALIGAYYVGG------GLIAALYMMKWLGIDADLEVSLV 1221
K D+ + + KTIAD EALIGA Y+ A+ + + D + ++
Sbjct: 1188 KRKDLTRQHVLADKTIADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHTMTSY 1247
Query: 1222 DDCITRASLRSY--VP----RINEIKDIESKIGYEFTVKFLLQEAITHASVQEFY----C 1271
D S ++ P +++ E+++GY FT LL+ A H + Y
Sbjct: 1248 SDYYAAYSPPAWQTAPCNSTQLDMAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPS 1307
Query: 1272 YQNL--------------------------------------------------YKHLQH 1281
YQ L ++ + +
Sbjct: 1308 YQRLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFHRAISY 1367
Query: 1282 CSTLLLSQITEYVKSF----------------------PKPGETTDSGPSM-------KA 1312
C++ + +ITEYV P PG+ + +
Sbjct: 1368 CASAIQKEITEYVTEIEDALQSARDDASKTPCNRHATTPSPGDLPAESFARDFWVRCSRP 1427
Query: 1313 PKALGDLLESIVGAVLIDTKLNLDEVWRIFKPILSPIVTPDKLELPPLRELIELCDSLGY 1372
PK L D++E+ VGAV +D++ + V F + P E + L D+
Sbjct: 1428 PKCLPDVVEAYVGAVFVDSRYDFARVRAFFADHVRPFF-----------EDMRLYDAFAN 1476
Query: 1373 FVKENCT-----LKGEMVHAELRLQLKD---VLLVGEGQE 1404
K T ++G M AE RL +KD V+ G G E
Sbjct: 1477 --KHPVTFLAGIMQGRMRCAEWRLLVKDLPPVVGAGAGTE 1514
>sp|Q7S8J7|DCL1_NEUCR Dicer-like protein 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-1
PE=2 SV=1
Length = 1584
Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 178/650 (27%), Positives = 314/650 (48%), Gaps = 80/650 (12%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQA---IKSNGF-KKLIIFLAP 101
PR YQ+++FE AK++NTIAVL+TG+GKT+IA ML++ + + G +++ FL
Sbjct: 122 PREYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVITGELEDREKGLPRRIAFFLVD 181
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYG--AKGVDEWDSQCWQKEINKNDVLVMTPQILLDAL 159
V LV QQ+ + + DF +E+ G +GV+ W++ + +N+V+V T +IL AL
Sbjct: 182 KVALVFQQHSFLTKNLDFPMEKLCGEMVEGVES--KAFWKEALEQNEVVVCTAEILSTAL 239
Query: 160 RKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFY--HKSDNKPKVFGMTASPVVRKGVS 217
+++ +D + ++ DE HH +HPY +I+K FY + + +P++ G+TASP V
Sbjct: 240 HHSWIRMDQINLLIFDEAHHTKKDHPYARIIKNFYIDEQLERRPRILGLTASP-----VD 294
Query: 218 SAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVS 277
+ +D +ELE+ L SQ+ T D P+A + +++ ++G+ + S
Sbjct: 295 AKVDPRRAAAELEALLHSQIATAAD--------PAALQHTICKPKTELVVEYVRGRPD-S 345
Query: 278 WSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICA--YEAVKI 335
+ + L KL G Q + +K L+ + +LG CA Y +
Sbjct: 346 ETVLNKQLRKLVGGQ-----------ELFKKPLNFTTS----AASKLGTWCADRYWQLFF 390
Query: 336 CLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYI 395
E ++K + E L L+E+ + A ++ F A+D +
Sbjct: 391 KQEDIVKLESRTE----RDLMKVAALDEITEKHVKQVREAHELVNAHTFS-PAALDPTML 445
Query: 396 STKLHELLQLF---LSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHL-TVA---YL 448
S+K+ L+++ G Q CIIFV + A ++ +++ +H+ ++A +
Sbjct: 446 SSKVIMLVRILRDQFERGVGAQ-RCIIFVRQRNTAMLLADLLQQPEIKSHIPSIAAEVLV 504
Query: 449 TGSTTSVDALTPKV----QKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKT 504
G TT + K+ Q ++ F+ G++N LFAT V EEG+ +P+C+ VIRFDL T
Sbjct: 505 GGGTTGSSYVNAKINFQQQNRIIRKFKLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDT 564
Query: 505 VSSYIQSRGRARQHNSQFILMLERSERSVTDTAL-SRDPEACFLKACTYVK--------- 554
+ IQSRGRAR+ +S++I M+E+ L ++ E K C +
Sbjct: 565 LIQCIQSRGRARRPDSRYIQMIEKGNYEHHSRILRAKGAEDVLRKFCEALPEDRKLTGNH 624
Query: 555 ------------TKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEE 602
+ Y V TGA ++ S+ + + LP + P + +
Sbjct: 625 MNLDYLLRKEKGKRQYTVPDTGAKLSYMQSLVCLANFTATLPHPPETSLSPEYYITTVPG 684
Query: 603 AYECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHL 652
++CE+ +P +P ++ VG +K ++K E C L + G L++HL
Sbjct: 685 GFQCEVVMPDASPIKSAVGKVHLSKGVAKCAAAFELCLALLKAGHLDNHL 734
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 123/325 (37%), Gaps = 64/325 (19%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALT--------- 1053
+P VV L PS++ R+ES ++A C + L LEA T
Sbjct: 1029 IPADVVAMLLCFPSIIHRVESNLVALD-----ACKLLGLDLRPDLALEAFTKDSDNSDEH 1083
Query: 1054 -------TLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNST 1106
G +++ ERLE LGDS LK A + ++ P K E + R +CN
Sbjct: 1084 DAEKENFQTGMGDNY--ERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKN 1141
Query: 1107 LHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVV 1166
L + L+ YIR +F+ R+W G + +
Sbjct: 1142 LFNNALEIGLEEYIRSMSFNRRQWYPEGLILKK--------------------------- 1174
Query: 1167 VGKPCDMGHRW-MGSKTIADCAEALIGAYYVGG----------GLIAALYMMKWLGIDAD 1215
GK D R + K+IAD EALIGA Y+ G + A+ K + +
Sbjct: 1175 -GKSKDARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVKDKKHRMISY 1233
Query: 1216 LEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQEFYCYQNL 1275
+ V T + + + + K ++GY+F LL+ A H + Y
Sbjct: 1234 GDYYAVYQKPTWQTESANSAQRDMAKKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLPS 1293
Query: 1276 YKHLQHCSTLLLSQIT-EYV-KSFP 1298
Y+ L+ L + +Y+ + FP
Sbjct: 1294 YQRLEFLGDALFDMVAVDYLFRKFP 1318
>sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasitica GN=DCL-2 PE=3 SV=1
Length = 1451
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 188/702 (26%), Positives = 314/702 (44%), Gaps = 115/702 (16%)
Query: 27 GHDHAVDGPSSSTNSINFIP--------RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVM 78
GH D P +P R YQL++ E + + N I ++TG+GKT +A++
Sbjct: 36 GHLSEEDSPGGKPRPKEQLPKDIVKMDARAYQLEMLEASLKENIICAMDTGSGKTHVAIL 95
Query: 79 LIKDIAQAIKSNGFKKLIIFLAPTVHLVHQQYDVIRVHT-DFEVEEYYGAKGVDEWDSQC 137
IK + + +++ FL PTV L QQY V++ + + GA VD W S
Sbjct: 96 RIKAELEEMPEG---QVVWFLTPTVSLCAQQYAVVKAQIPSVQTKIVTGADKVDSWSSTT 152
Query: 138 WQKEINKNDVLVMTPQILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKS 197
W + V++ TPQ+LLDAL F+++ + +V DE HH NH Y+++MKEFY +S
Sbjct: 153 WDGALLNVKVIITTPQVLLDALLHGFVNISSLALMVFDEAHHCNKNHAYSRVMKEFYWES 212
Query: 198 DNK----PKVFGMTASPVVRKGVSSAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSA 253
K P++ G+TASPVVR +SS + LESTLD+ + E + ++
Sbjct: 213 KTKHEPVPRILGLTASPVVRSDISS-------LKRLESTLDAVCRS--PTRHREELIANS 263
Query: 254 KESCRFYDQSKFCGSDLKGKLEVSWSKFDASLSKLQGSQLNCYKDMDDKHK-TLRKQLSD 312
+ F KL+ + F SL+KL ++ N ++D + +LR ++SD
Sbjct: 264 QRPALF-------SIIYNPKLQPYAAGFSESLTKLMAAR-NKLNILEDPYVVSLRAEISD 315
Query: 313 YHAKIL---------YCLD--------------ELGLICA----YEAVKICLEKVLKAQE 345
+ L Y D ELG A EA+++ L
Sbjct: 316 RSRRKLEKAIKEKRTYVQDTMKSFCRRSMEMAKELGAWAADWFISEAIRLFL-------- 367
Query: 346 ECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDL-GYISTKLHELLQ 404
IYRQ + + EV+ + ++F D + + +S K+ +++
Sbjct: 368 -AGIYRQGASSKSFRDAEVIFLA--------RVFQDANIEPPPPLTTHSGLSEKVQRIIE 418
Query: 405 LFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFL-------THLTVAYLTGSTTSVDA 457
+ L++ K + +C FV+ V+ + P + T + +++ G
Sbjct: 419 VLLNYDKDARAIC--FVKERATTVVLSHILTTHPEVSSKFRIGTMVGTSFVPGVKRDFLD 476
Query: 458 LTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQ 517
L + LE+FR G+ N+L AT V+EEG+ VP C+ +I FD P + ++IQ RGRAR
Sbjct: 477 LPETGGSQCLEAFREGRKNMLVATSVLEEGIDVPACNLIICFDKPNNLRAFIQRRGRARM 536
Query: 518 HNSQFILMLERSERSVTDTALSRDPEACF---------LKACTYVKTKSYI----VESTG 564
S L +E E AL + + L+A + Y VESTG
Sbjct: 537 RQSHLYLFVE-DEAEADWEALEAQMKLQYEDEKREHERLEAIENSEALDYPEELRVESTG 595
Query: 565 ASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYE--------CELTLPSNAPF 616
A +T + + + + + L S K+ +P + + + Y+ + LP + P
Sbjct: 596 ARLTINDAKSHLQHFVSTLASRKFVQTQPDYLIEKVSQGYQPGDQPLLKATVLLPVSVP- 654
Query: 617 QTIVGPTSRNKNLSKQLVCLEAC----EKLHQVGALNDHLLP 654
Q + TS +S++ C++A + L++ G ++DHLLP
Sbjct: 655 QALRQVTSSRTWVSEKNACMDAAFQAYKALYEAGLVDDHLLP 696
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 34/296 (11%)
Query: 984 TKKPQMHVHMPPELLVRVDVPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHI 1043
+ KP ++ +P E +P+ + L+PS++ E ++A++L ++ R ++
Sbjct: 926 STKPYAYI-LPAETTTVDRIPLVYAQMGLLMPSLVCYTELYLVAAELSRKVLAPLRISNV 984
Query: 1044 PSSLILEALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVC 1103
S+++EA+ + ER+E LGDS+LK ++ +L T EG LS + V
Sbjct: 985 --SMLVEAICAKSARTPENYERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVS 1042
Query: 1104 NSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDT 1163
N+ L + D +L ++ + W + P QD
Sbjct: 1043 NARLCRAACDAELDQFLVTQQLVTKGW--------------------QPPYMSDLAKQDQ 1082
Query: 1164 KVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLE-VSLVD 1222
+ R + KT+AD EALIG +V GGL AL ++ ++ S V
Sbjct: 1083 E-------PESKRILSPKTLADVVEALIGVSFVDGGLPKALECIRLFIPESQPRPFSEVR 1135
Query: 1223 DCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQ---EFYCYQNL 1275
D + A+ + +++ +E I Y F K LL EA+TH S CY L
Sbjct: 1136 DILFGAAEPKGMKLPADLQLLEQLIEYSFCEKALLVEAVTHPSYNVSGTVACYDRL 1191
>sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=dcl2-1 PE=3 SV=2
Length = 1387
Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 181/661 (27%), Positives = 303/661 (45%), Gaps = 76/661 (11%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTV 103
+ PR YQ+++FE + + N I + TG+GKT IA++ I + ++SN KLI FL PTV
Sbjct: 17 YRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALL---RIIKELESNP-HKLIWFLTPTV 72
Query: 104 HLVHQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQ-CWQKEINKNDVLVMTPQILLDALRK 161
L QQ+ + + V+ W Q W + + V+V T +L DA+
Sbjct: 73 ALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAVLADAMSH 132
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK------PKVFGMTASPVVRKG 215
F+ + + ++ DE HH HP KIM++FYH + + PK+ G+TASPVVR
Sbjct: 133 GFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTASPVVRSN 192
Query: 216 VSSAMDCEGQISEL---ESTLDSQVFTIEDKTEME--VFVPSAKESCRFYDQSKFCGSDL 270
+ E + + T S++ T + ++ +F P + + GS
Sbjct: 193 RQELLKIESNLDAVCKTPRTHRSELMTHTHRPHLQQILFTPVLLDDLQ-------VGSKT 245
Query: 271 KGKLEVSWSKF----DASLSKLQGSQLN---CYKDMDDKHKTLRKQLSDYHAKILYCLDE 323
L +W+ D + KL+ S L+ K ++ QL + + L+ +E
Sbjct: 246 LKALVSAWTSLRLEDDPYIKKLRKSPLDGRALQKVLESGKTYCNDQLKRFATRSLHIFEE 305
Query: 324 LGLICAYEAVKICLEKV-LKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDF 382
LG A + +E++ +A + + + Y L+ I S LP+ +
Sbjct: 306 LGEWAADYFIHASIEQLKARAGNSADTMGWTDEEKAYLLD-----IVSKLPIPN-----I 355
Query: 383 GFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTH 442
+S D IS+K LL+ FL +IF ++ V+E+ + P H
Sbjct: 356 DLTHSDP-DRIPISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKH 413
Query: 443 LT-----VAYLTGSTTSV--DALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSY 495
V + G + V + L ++Q++ L FR G+ NL+ ATDV+EEG+ + CS
Sbjct: 414 RFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSV 473
Query: 496 VIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALS---------------- 539
V+ FD P + S++Q RGRAR S + +M + S +ALS
Sbjct: 474 VVCFDKPPNLKSFVQRRGRARHRQSTYAIMFATDDES---SALSKWEDLEQAMIEAYEDD 530
Query: 540 --RDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKY 597
R EA L+A + V+STGA +T D++V ++ +C +LP Y + +P F Y
Sbjct: 531 ERRLREAWALEAINEEVVERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSY 590
Query: 598 -KSAEEAYECELTLPS--NAPFQTIVGPT-SRNKNLSKQLVCLEACEKLHQVGALNDHLL 653
K + +TLPS + + I G + + +++ +A ++L++ G L+DHLL
Sbjct: 591 EKDDADLLRGTVTLPSCVHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLL 650
Query: 654 P 654
P
Sbjct: 651 P 651
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 120/274 (43%), Gaps = 55/274 (20%)
Query: 1017 VMQRLESLMLASQLREEINCHSRNFHIPS-SLILEALTTLGCCESFSMERLELLGDSVLK 1075
++ RLE+ ++A++L E I R+ S I+ A+T + +R E GDSVLK
Sbjct: 905 ILDRLEATLVATRLCETI---LRDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLK 961
Query: 1076 YAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAP-- 1133
+ VSC LF +P HEG LS R V NS L + D L +I + F PR+W AP
Sbjct: 962 FTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAPLI 1021
Query: 1134 -GQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIG 1192
++SL P R M +K +AD EALIG
Sbjct: 1022 SEKISLTP---------------------------------KQRTMSTKVLADVVEALIG 1048
Query: 1193 AYYVGGGLIAALYMMKWLGIDADLE------VSLVDDCITRASLRSYVPRINEIKDIESK 1246
A Y+ GG AA + + +LE + D +T +L + +
Sbjct: 1049 ASYIDGGFAAAHACIHRFLPEVNLENIDRTTAPMPKDGVTNHTLND--------DHLMAH 1100
Query: 1247 IGYEFTVKFLLQEAITHASVQEFYCYQNLYKHLQ 1280
IGY FT K LL E++TH S Q F Y+ L+
Sbjct: 1101 IGYTFTNKSLLVESLTHPSCQ-FDTTTQSYQRLE 1133
>sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=dcl2 PE=3 SV=2
Length = 1388
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 187/681 (27%), Positives = 312/681 (45%), Gaps = 88/681 (12%)
Query: 36 SSSTNSINFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIK---DIAQAIKSNGF 92
S+ ++ + PR YQL++ E + + N I ++TG+GKT IAV+ IK DI
Sbjct: 6 STCQDASPYQPRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKAELDICSP------ 59
Query: 93 KKLIIFLAPTVHLVHQQYDVIRVHTD-FEVEEYYGAKGVDEW-DSQCWQKEINKNDVLVM 150
K++ FLAPTV L QQ++VI + G V+ W D W +N V+V
Sbjct: 60 DKVVWFLAPTVALCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVS 119
Query: 151 TPQILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK------PKVF 204
T +L DAL F+ + + ++ DE HH T H KIM++FYH + K P++
Sbjct: 120 THAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTKSGPAAVPRIM 179
Query: 205 GMTASPVVRKGVSSAMDCEGQISELESTLDSQVFTIE-DKTEMEVFVPSAKESCRFY--- 260
G+TASPVVR ++ +ES LD+ T + E+ F +Y
Sbjct: 180 GLTASPVVRSN-------HQELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPT 232
Query: 261 DQSKFCGSDLK-GKLEVSWSKFDAS----LSKLQGSQLN---CYKDMDDKHKTLRKQLSD 312
D + F + L G L +W D + +L+ S L+ K + R+QL
Sbjct: 233 DPAGFRSASLTLGALYHAWENLDIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRR 292
Query: 313 YHAKILYCLDELGLICA----YEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVI 368
+ + + +ELG A Y ++K ++V R S + + E +++
Sbjct: 293 FVDRSRHIFEELGEWAAEYYIYASIKQLRDRV----------RDSYMSGDWDEAEKAYLV 342
Query: 369 G--SALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIA 426
S +P +D + F + D IS K LL FL + +IFV++ +
Sbjct: 343 DFLSKIPTSD---IHFALNDP---DGFRISPKFESLLN-FLDSSDQREFSGLIFVKQRVT 395
Query: 427 AKVVERFVKKVPFLTH--LTVAYLTGSTTSV------DALTPKVQKEVLESFRGGKVNLL 478
+ + P+ AY+ S +S D L ++Q++ L+ FR G+ NL+
Sbjct: 396 VSAMTSLLSVHPYTRERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLI 455
Query: 479 FATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTAL 538
ATDV+EEG+ + CS V+ +D P + S+IQ RGRAR+ S F +M + S D +
Sbjct: 456 IATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSA-DVSR 514
Query: 539 SRDPEACFLKACTYVKTKSYIV----------------ESTGASVTTDSSVNLIHRYCEM 582
+D E ++A + + V +ST A +T D ++ +H +C +
Sbjct: 515 WQDLEQAMIEAYQDDERQLQSVSALESLDEEVMERLTGDSTSAVLTADMAMAHLHHFCAV 574
Query: 583 LPSDKYYTPKPIFKYKSAEEA-YECELTLPS--NAPFQTIVGPT-SRNKNLSKQLVCLEA 638
LP Y +P+F +++ E+ + + LPS + + G R + + + +A
Sbjct: 575 LPPQPYVDMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQA 634
Query: 639 CEKLHQVGALNDHLLPSVEEP 659
+ L++ G +NDHLLP ++P
Sbjct: 635 YKSLYEFGLVNDHLLPLTKKP 655
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSS-LILEALTTLGCCESF 1061
+P ++ + +++++LE ++A++LR+ I R+ S+ I+ A++T
Sbjct: 895 LPFTMAIFGLFISAIVEQLEIELIATRLRDTI---LRDVSFKSTDHIITAISTPLAHRLT 951
Query: 1062 SMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIR 1121
+ +R E LGDS+LK++VSC LF +P HEG LS R V N L K D L YI
Sbjct: 952 NYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLDAYIV 1011
Query: 1122 DSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSK 1181
R+W AP ++ V K R M +K
Sbjct: 1012 TKRLASRKWSAP------------------------LISEKLGRVPAK------RQMSTK 1041
Query: 1182 TIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVP---RIN 1238
+AD EALIGA YV GG A ++ + +L VD TR + RS P R
Sbjct: 1042 VLADVVEALIGAAYVDGGHSTAQACIRRFLPEINLHA--VD---TRTAARSVAPESARHM 1096
Query: 1239 EIKDIESKIGYEFTVKFLLQEAITHASVQEFYCYQNLYKHLQHCSTLLLSQI 1290
++ IGY F + LL EA+TH S ++ Y+ L++ +L +
Sbjct: 1097 MNDRLKDHIGYTFEDESLLVEALTHPSC-DYDSTTQSYQRLEYLGDAVLDMV 1147
>sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=dcl2 PE=3 SV=1
Length = 1377
Score = 204 bits (518), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 189/672 (28%), Positives = 301/672 (44%), Gaps = 75/672 (11%)
Query: 37 SSTNSINFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLI 96
S+ + + PR YQ ++FE + + N I ++TG GKT IA++ IA ++ G +KL
Sbjct: 7 SNGTGLLYKPRQYQYEMFEASLKENIIVAMDTGTGKTQIALL---RIAHQLEGGGPRKLT 63
Query: 97 IFLAPTVHLVHQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQ-CWQKEINKNDVLVMTPQI 154
FL PTV L QQY+VIR H G V+ W SQ W + + V+V T +
Sbjct: 64 WFLTPTVALCLQQYEVIRSHLPAVRACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAV 123
Query: 155 LLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKS------DNKPKVFGMTA 208
L +AL F+ + + ++ DE HH HP IM +FYH + D+ P + G+TA
Sbjct: 124 LFEALTHGFVRISQLGLLIFDEAHHCMRRHPANMIMLDFYHPTLRKHGRDSVPCILGLTA 183
Query: 209 SPVVRKGVSSAMDCEGQISELESTLDSQVFTIE-DKTEMEVFVPSAKE---SCRFYDQSK 264
SPVVR ++ LES LDS T + K E+ + + C+ D+
Sbjct: 184 SPVVRSKSQ-------EMKTLESNLDSICKTPQVHKQELTTYAHRPELLPIICKAIDEGP 236
Query: 265 FCGSDLKGKLEVSWSKF----DASLSKLQGSQLNC---YKDMDDKHKTLRKQLSDYHAKI 317
G LE +W D GS LN YK + + +Q+ + +
Sbjct: 237 --GGRALQALEHAWDTADIDGDPDAIPQNGSLLNGSGEYKALMVRKTLCNEQIKRFVDRS 294
Query: 318 LYCLDELGLICAYEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIG--SALPLA 375
+ ELG A + +E++ R SL + EE ++ S LP+A
Sbjct: 295 RHIFAELGEWAADYYICTSVEQLRTT------IRDQSLTMDWEDEERAYLSNFLSKLPVA 348
Query: 376 D-KIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFV 434
+ + L +++ +S KL L+ FL + +IFV++ + V+ R +
Sbjct: 349 EVQANLADPNNFT-------MSPKLAALIN-FLDKFDDPEFSGLIFVKQRVTVSVLARLL 400
Query: 435 KKVP-----FLTHLTVAYLTGSTTSV---DALTPKVQKEVLESFRGGKVNLLFATDVIEE 486
P F V GS D K Q+ ++ FR G+ NL+ T V+EE
Sbjct: 401 SLHPQTRDRFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVTTSVLEE 460
Query: 487 GMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSER-------SVTDTAL- 538
G+ V C V+ FD P + S+IQ RGRARQ S + +M ++ + + A+
Sbjct: 461 GIDVTACRVVVCFDKPANLKSFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQILEQAMV 520
Query: 539 -------SRDPEACFLKACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTP 591
R EA +A + VE+TGA +T DS V ++ +C +LP ++Y
Sbjct: 521 EAYQDEERRLREAEAQEAVDENVPEMITVEATGAVITPDSVVTHLYHFCAVLPEERYVDN 580
Query: 592 KPIFKY-KSAEEAYECELTLPS--NAPFQTIVGPT-SRNKNLSKQLVCLEACEKLHQVGA 647
+P F + K + + + LPS + + I G +++ + + +A L++ G
Sbjct: 581 RPEFSFEKDRQGLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVKETAFQAYRALYEFGL 640
Query: 648 LNDHLLPSVEEP 659
LNDHLLP + P
Sbjct: 641 LNDHLLPLTKNP 652
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 127/301 (42%), Gaps = 35/301 (11%)
Query: 991 VHMPPELLVRVD-VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLIL 1049
VHM VD +P+S +P ++ RLES ++A++L I C I ++
Sbjct: 875 VHMVAAESCTVDKLPVSTAIFGLFIPHIVDRLESTLIANRLCATILCDVGFADIQH--VI 932
Query: 1050 EALTTLGCCESFSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHK 1109
A+ + +R E LGDS+LKY VSC LF EG L+ R+ V N L +
Sbjct: 933 TAIMAPSAQGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTR 992
Query: 1110 LGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGK 1169
D L +I A PRRW+AP +S R V
Sbjct: 993 AALDAGLDSFIITKALTPRRWIAP-LISTR--------------------------VGAA 1025
Query: 1170 PCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRAS 1229
P R M +K +AD EALIGA Y+ GG A + + + + IT+
Sbjct: 1026 PV---KRQMSAKVLADVIEALIGAAYLDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTE 1082
Query: 1230 LRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHASVQEFYCYQNLYKHLQHCSTLLLSQ 1289
I + D++ +GY F + LL EA+TH S Q Q+ Y+ L+ +L
Sbjct: 1083 HGRTARHIID-GDLQRHLGYTFKNEDLLIEALTHPSCQHDQTTQS-YQRLEFLGDAILDM 1140
Query: 1290 I 1290
+
Sbjct: 1141 V 1141
>sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / FGSC A1164 / NRRL 181) GN=dcl2 PE=3 SV=1
Length = 1388
Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 189/675 (28%), Positives = 306/675 (45%), Gaps = 92/675 (13%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIK---DIAQAIKSNGFKKLIIFLA 100
+ PR YQL++ E + + N I ++TG+GKT IAV+ IK DI KL+ FLA
Sbjct: 14 YQPRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKAELDICPP------DKLVWFLA 67
Query: 101 PTVHLVHQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQC-WQKEINKNDVLVMTPQILLDA 158
PTV L QQ++VI + G V+ W Q W +N V+V T +L DA
Sbjct: 68 PTVALCIQQHEVIASNLPAVRTRTLTGLDKVELWTEQSIWDAVLNGYRVIVSTHAVLADA 127
Query: 159 LRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK------PKVFGMTASPVV 212
L F+ + + ++ DE HH T H KIM++FYH + K P++ G+TASPVV
Sbjct: 128 LSHGFVKMSRLALLIFDEAHHCTRRHAANKIMRDFYHPTLTKSGPGAVPRIMGLTASPVV 187
Query: 213 RKGVSSAMDCEGQISELESTLDSQVFTIE-DKTEMEVFVPSAKESCRFYDQSKFCG---- 267
R ++ +ES LD+ T + E+ F +Y + G
Sbjct: 188 RSN-------HQELLTVESNLDAVCRTPRVHRQELVKFTHRPHLQQIWYTPTDPAGFKSA 240
Query: 268 SDLKGKLEVSWSKFDAS----LSKLQGSQLN---CYKDMDDKHKTLRKQLSDYHAKILYC 320
S G L +W D + +L+ S L+ K + R+QL + + +
Sbjct: 241 SQTLGALYHAWETLDIGDDPYIQRLRKSPLDDTALKKALLTGKTYCREQLRRFVDRSRHI 300
Query: 321 LDELGLICA----YEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIG--SALPL 374
+ELG A Y ++K ++V R S + + E +++ S +P
Sbjct: 301 FEELGEWAAEYYIYASIKQLGDRV----------RNSYMSGDWDEAEKAYLVDFLSKIP- 349
Query: 375 ADKIFLDFGFDYSKAVDLG--YISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVER 432
A +I L D G IS K LL FL + +IFV++ +
Sbjct: 350 ASEIQLALN-------DPGSFRISPKFESLLN-FLDSLDEREFSGLIFVKQRATVSAMTS 401
Query: 433 FVKKVP-----FLTHLTVAYLTGSTTSV---DALTPKVQKEVLESFRGGKVNLLFATDVI 484
+ P F V + GS + D L ++Q++ L+ FR G+ NL+ ATDV+
Sbjct: 402 LLSVHPCTRERFRCAAYVGWSNGSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVL 461
Query: 485 EEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPEA 544
EEG+ + CS V+ +D P + S++Q RGRAR+ S F +M + S D + +D E
Sbjct: 462 EEGIDISACSVVVCYDKPPNLKSFVQRRGRARRKQSTFAIMFPTDDASA-DVSKWQDLEQ 520
Query: 545 CFLKACT----YVKTKSYI------------VESTGASVTTDSSVNLIHRYCEMLPSDKY 588
++A +++ S + VEST A +T D ++ +H +C +LP Y
Sbjct: 521 AMIEAYQDDERQLQSVSALESLDEEVMERLTVESTSAVLTADMAMAHLHHFCAVLPPQPY 580
Query: 589 YTPKPIFKYKSAEEA-YECELTLPS--NAPFQTIVGPT-SRNKNLSKQLVCLEACEKLHQ 644
+P+F +++ E+ + + LPS + + G R + + + +A + L++
Sbjct: 581 ADMRPVFSFETNEDGLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQAYKALYE 640
Query: 645 VGALNDHLLPSVEEP 659
G +NDHLLP + P
Sbjct: 641 FGLVNDHLLPLTKRP 655
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 137/294 (46%), Gaps = 47/294 (15%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSS-LILEALTTLGCCESF 1061
+P ++ + ++++RLE+ ++A++LRE I R+ S+ I+ A++T
Sbjct: 895 LPFTMAIFGLFISAIVERLETELIATRLRETI---LRDVGFKSTDHIITAISTPFAHALT 951
Query: 1062 SMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIR 1121
+ +R E LGDS+LK++VSC LF +P HEG LS R+ V N L K D L YI
Sbjct: 952 NYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAYIV 1011
Query: 1122 DSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSK 1181
R+W AP ++ + V K R M +K
Sbjct: 1012 TKRIASRKWSAP------------------------LISEKLERVPAK------RQMSTK 1041
Query: 1182 TIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPR----- 1236
+AD EALIGA Y+ GG A ++ L + +L VD TR + RS P
Sbjct: 1042 VLADVVEALIGAAYMDGGHATAQACIRRLLPEINLHA--VD---TRTATRSVAPESARHM 1096
Query: 1237 INEIKDIESKIGYEFTVKFLLQEAITHASVQEFYCYQNLYKHLQHCSTLLLSQI 1290
+NE ++ IGY F + LL EA+TH S ++ Y+ L++ +L +
Sbjct: 1097 MNE--RLKDHIGYTFEDESLLVEALTHPSC-DYDSTTQSYQRLEYLGDAVLDMV 1147
>sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dcr1 PE=1 SV=1
Length = 1374
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 299/652 (45%), Gaps = 88/652 (13%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQA---IKSNGF--KKLIIFLAP 101
R YQ V+ +A ++NT+ V+ TGAGKT++AV LIK + I+ + KK+ +FL
Sbjct: 13 RKYQQDVYNIASKQNTLLVMRTGAGKTLLAVKLIKQKLEEQILIQESNLEHKKISVFLVN 72
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
V LV QQ + IR +V +YG + E Q I K +V+V+T + L +
Sbjct: 73 KVPLVFQQAEYIRSQLPAKVGMFYGELSI-EMSEQLLTNIILKYNVIVITADLFYLFLAR 131
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSD--------NKPKVFGMTASPVV- 212
FLS++ + I+ DECHHA GN Y +IM +FYH++ P++FGMTASP
Sbjct: 132 GFLSINDLNLIIFDECHHAIGNDAYARIMNDFYHRAKAVLSKKHFTLPRIFGMTASPFTG 191
Query: 213 RKGVSSAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKG 272
+KG + ++ + E DS+ + + E+ + +ES Y
Sbjct: 192 KKG-----NLYHRLYQWEQLFDSKAHVVSE-NELADYFCLPEESYVMYS----------N 235
Query: 273 KLEVSWSKFDASLSK----LQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLIC 328
KL V S D+ + K LQG +L +T+ L LY +D +
Sbjct: 236 KLVVPPS--DSIIKKCEETLQGCKLISRAVKTALAETIDMGLWFGEQVWLYLVD---FVE 290
Query: 329 AYEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVI----GSALPLADKIFLDFGF 384
K L K L EE I R K F+E+ + G +P+ F
Sbjct: 291 TKRLKKKALGKQLSDDEELAIDR-----LKIFVEDWKNNKYSDNGPRIPV---------F 336
Query: 385 DYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHLT 444
D + D + KL ELL+ ++ KS V +IFVER A + F+K + L ++
Sbjct: 337 DSTDVTDKVF---KLLELLK--ATYRKSDSVRTVIFVERKATAFTLSLFMKTLN-LPNIR 390
Query: 445 VAYLTGSTTSVD---ALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDL 501
G S ++T + QK+ L F+ GK N+L AT V EEG+ VP+C+ VIRF++
Sbjct: 391 AHSFIGHGPSDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNI 450
Query: 502 PKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFLKACTYVKTKS---- 557
+TV+ Y+QSRGRAR S+F++ L E + + L + F A + + +
Sbjct: 451 CRTVTQYVQSRGRARAMASKFLIFLNTEELLIHERILHEEKNLKF--ALSELSNSNIFDS 508
Query: 558 --------------YIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA 603
Y V TGA +T +V+L++ +C L D Y P F +
Sbjct: 509 LVCEERERVTDDIVYEVGETGALLTGLYAVSLLYNFCNTLSRDVYTRYYPTFTAQPCLSG 568
Query: 604 YEC-ELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHLLP 654
+ C E+ LP G +++ +KQ C L ++G ++ HL P
Sbjct: 569 WYCFEVELPKACKVPAAQGSPAKSIRKAKQNAAFIMCLDLIRMGLIDKHLKP 620
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 154/401 (38%), Gaps = 98/401 (24%)
Query: 1003 VPIS--VVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCES 1060
+P+S + S L+PS++ +E+L++AS E + I ++ +ALT+ +
Sbjct: 872 LPVSRHLKNSALLIPSILYHIENLLVASSFIEHFRLDCK---IDTAC--QALTSAESQLN 926
Query: 1061 FSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYI 1120
F +RLE GD LK S +FL +P E QL R + N L+K+ D +L Y
Sbjct: 927 FDYDRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCELPKYA 986
Query: 1121 RDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGS 1180
+ + R W G C V + +
Sbjct: 987 LSTPLEIRHWCPYGFQKSTSDKCRYAV---------------------------LQKLSV 1019
Query: 1181 KTIADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINEI 1240
K IAD EA IGA + GL +AL + K L + L++S D+ L +Y + +
Sbjct: 1020 KRIADMVEASIGACLLDSGLDSALKICKSLSVGL-LDISNWDEWNNYFDLNTYADSLRNV 1078
Query: 1241 K-----DIESKIGYEFTVKFLLQEAITHASVQ------------EF------------YC 1271
+ IE IGY F K LL A H S+ EF Y
Sbjct: 1079 QFPYSSYIEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDAVLDYIIVQYL 1138
Query: 1272 YQ------------------------------NLYKHLQHCSTLLLSQITEYVKSFPKPG 1301
Y+ NL+K++QH S + I EY +
Sbjct: 1139 YKKYPNATSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIFEYQELIEAFR 1198
Query: 1302 ETTDSGP----SMKAPKALGDLLESIVGAVLIDTKLNLDEV 1338
ET P + +PK + D LE+++ A+ +D+ +L +
Sbjct: 1199 ETASENPWFWFEIDSPKFISDTLEAMICAIFLDSGFSLQSL 1239
>sp|Q0UL22|DCL2_PHANO Dicer-like protein 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=DCL2 PE=3 SV=2
Length = 1399
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 169/672 (25%), Positives = 313/672 (46%), Gaps = 79/672 (11%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTV 103
F R YQ ++ E + + N I V++TG+GKT IA+ + + + + K++ FLAPTV
Sbjct: 9 FRLRSYQAEMVEESMQSNIICVMDTGSGKTHIAIDRTRAELEICRPD---KIVWFLAPTV 65
Query: 104 HLVHQQYDVIRVH-TDFEVEEYYGAKGVDEWDSQ-CWQKEINKNDVLVMTPQILLDALRK 161
L QQ+ V + + + ++ G +D W Q W + +++ T Q+LLDAL
Sbjct: 66 TLCEQQFAVFKSNLPGYGIQLLSGKDNLDHWTDQGVWDDVLLNIRIVLSTHQVLLDALSH 125
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHK--SDNKPKVFGMTASPVVRKGVSSA 219
F+ + + ++ DE HH + HP +IM +FY P++ G++ASP+ V+S
Sbjct: 126 GFVKMRNLSLLIFDEAHHCSLKHPAHRIMSDFYKPRIGTELPRILGLSASPIKTAKVTSE 185
Query: 220 MDCEGQISELESTLDSQVFTIE-DKTEMEVFVPSAK-ESCRFYDQSKFCGSDLKGKLEVS 277
+ ++E L + V T + ++E+ +V + + + S++ L+ +
Sbjct: 186 -----DLQQIERNLCATVKTPKLHRSELLRYVHRPHLMRIDYPVEPQDLQSNMLSFLKSA 240
Query: 278 WSKFDAS----LSKLQGSQLNCYKDMDDKHKTL-------RKQLSDYHAKILYCLDELGL 326
++ +D +S+L + + + HK R QL K ELG+
Sbjct: 241 YTNYDLQKDPWVSELLQQRQQGHDVTKNIHKVFIGGKTYCRDQLRSLALKAEAMSQELGM 300
Query: 327 ICAYEAVKICLEKVLKA--QEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGF 384
++ C+ + K + ++ S+ + ++ LE +L + S +D
Sbjct: 301 SVMDWYLRGCITQFSKMVHMSDSQLLDWSADEKRHLLE-ILRTLPS---------IDLNS 350
Query: 385 DYSKAVDLGYISTKLHELLQLFLSFGK-STQVLCIIFVE-RIIAAKVVERFVKKVPFLTH 442
+ LG +S KL L++ ++ K + C++FVE R+ A + E
Sbjct: 351 HDIPPMSLGSMSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACIAEVLAIHPETRDL 410
Query: 443 LTVAYLTGST------TSVDALT-PKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSY 495
L V G + ++ +++ P+ Q+ LE+FR GK+NL+ AT V+EEG+ V +C
Sbjct: 411 LRVGTFVGESENSKRKANIASISEPRNQQATLENFRAGKLNLILATSVLEEGIDVSSCHL 470
Query: 496 VIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPE----------AC 545
V+ F+ PK + S++Q RGRAR+ S++++ + ++ R RDPE A
Sbjct: 471 VVCFESPKNLKSFVQRRGRARKEESKYVIFVPQAGR-------RRDPESWQSLEEGMKAA 523
Query: 546 FLKACTYVKT------------KSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKP 593
+L VK +++ V+STGA +T D++ +H +C +L + Y +P
Sbjct: 524 YLDDLRQVKLATEKEQQSETGHRNFEVKSTGALLTLDNASQHLHHFCSILGAGPYIDNRP 583
Query: 594 IFKYKSAEEAY---ECELTLPSNAPFQTIVG-PTSRNKNLSKQLVCLEACEKLHQVGALN 649
F++ L L + +T T + ++KQ EA + L+ G +N
Sbjct: 584 QFEFTEIRPGVITARVILPLTVDPEVRTACALDTWATEKMAKQDAAFEAYKALYVAGLVN 643
Query: 650 DHLLPSVEEPSE 661
D+LLP+ +E +
Sbjct: 644 DNLLPARQEADD 655
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 111/266 (41%), Gaps = 33/266 (12%)
Query: 1001 VDVPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCES 1060
V P SV LLPS++ R ++A LR + S L+ AL + +
Sbjct: 886 VPAPYSVFA--LLLPSILHRFGMAIIAETLRTTLLGPVALDSAHSLLLTRALKSSAADGN 943
Query: 1061 FSMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYI 1120
+ +RLE LGD +LK+ + HL PK E L+A++ V N L + L ++
Sbjct: 944 DNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLDRFM 1003
Query: 1121 RDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGS 1180
+F +W AP + D G P R S
Sbjct: 1004 ITKSFTGAKW-APR------------------------YAGDLLAETG-PAVKEER--SS 1035
Query: 1181 KTIADCAEALIGA-YYVGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINE 1239
K IAD E+LIGA Y VGG A L + L ++ + V + + A+ +
Sbjct: 1036 KLIADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANSILHEAA--PAEADLMG 1093
Query: 1240 IKDIESKIGYEFTVKFLLQEAITHAS 1265
+ +E+ IGY F K LL EA+THAS
Sbjct: 1094 LDVLETLIGYTFKKKPLLLEALTHAS 1119
>sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=dcl2 PE=3 SV=1
Length = 1429
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 180/649 (27%), Positives = 290/649 (44%), Gaps = 90/649 (13%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLV 106
R YQL++FE + + N I V+ TG+GKT IA++ I I + S+G KLI FLAPTV L
Sbjct: 15 RSYQLEMFEASLKGNIIVVMGTGSGKTQIALLRI--IHELENSDG--KLIWFLAPTVPLC 70
Query: 107 HQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQC-WQKEINKNDVLVMTPQILLDALRKAFL 164
QQ+ VI H + G+ V+ W Q W + V+V TP +L DA+ F+
Sbjct: 71 LQQHRVISQHIPAVKSRTLLGSDKVELWTEQAVWDAVLEGLQVIVSTPAVLHDAMTHGFV 130
Query: 165 SLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK------PKVFGMTASP-VVRKGVS 217
+ + ++ DE HH HP IM+ FYH + + P++ G+TAS R+G+
Sbjct: 131 RISRLGLLIFDEAHHCIRKHPTNMIMRNFYHPALQEYGPGAVPRILGLTASAGSSREGLQ 190
Query: 218 SAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVS 277
+ E ++ + +T + + + T M +L+ L
Sbjct: 191 T---IEMNLNSVCTTPQAHRQELLEYTHM---------------------PELRRVLYTP 226
Query: 278 WSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICL 337
K +ASL +GS L + D+ + + Q+ + K ++ ELG+ A ++ +
Sbjct: 227 LMKENASL--WEGSTLQKLLERDNTYCS--GQMKTFVCKAVHIFQELGIWAAEYFIRASV 282
Query: 338 EKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYIST 397
E++L Y S + Y E L I S P+ D D + +
Sbjct: 283 EELLS-----HAYVHSKIDLDYDEREYLVNILSKSPVPD-------IDVHSTDPKDFPVS 330
Query: 398 KLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLT-HLTVAYLTGSTTSV- 455
E L FL + +IFVE+ A V+ + P G + S
Sbjct: 331 PKFEALISFLMSTEDINFSGLIFVEQRAAVTVMSYLLSTHPSTRDRFRTGSFIGMSNSTN 390
Query: 456 ------DALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYI 509
D L+ K+Q + L+ FR G+ NL+ ATDV++EG+ V CS VI +++PK S+I
Sbjct: 391 RKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFI 450
Query: 510 QSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFLK----ACTYVKTKS-------- 557
Q RGRAR+ NS + +ML S D + D F K AC + ++
Sbjct: 451 QRRGRARRQNSTYSMML-----STEDDGSTLDKWQKFEKIMEEACLEDRRRTEELRALGS 505
Query: 558 --------YIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEA-YECEL 608
+ V STGA +T + ++ + +C+ LP Y KP F ++ + ++
Sbjct: 506 LDEDVCTRFCVRSTGAILTAEYAMQHLVHFCDTLPRQNYVEDKPEFSFERNDGGLLRAKV 565
Query: 609 TLPS--NAPFQTIVGPT-SRNKNLSKQLVCLEACEKLHQVGALNDHLLP 654
LPS N + G + + +K+ A + L++ G +ND+LLP
Sbjct: 566 ILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLP 614
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 45/260 (17%)
Query: 1013 LLPSVMQRLESLMLASQLREEINCHSRNFHIPS-SLILEALTTLGCCESFSMERLELLGD 1071
+P ++ RLE+ ++A++L E + R+ ++ A+T +R E GD
Sbjct: 860 FIPVILDRLEAALVATRLCETV---LRDIQFQDLRHVITAITMPLAQAPTDYQRYEFFGD 916
Query: 1072 SVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWV 1131
SVLK+ V+ LF P HEG L+ V N+ L + D+ L YI + F PR+W
Sbjct: 917 SVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQGLDAYIISNRFTPRKWS 976
Query: 1132 APGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALI 1191
AP + K + + R M +K +AD EALI
Sbjct: 977 APL-------------------ISEKLYASAST-----------RSMSAKVLADVVEALI 1006
Query: 1192 GAYYVGGGLIAALY-MMKWLGIDADLEVSLVDDCITR-----ASLRSYVPRINEIKDIES 1245
GA Y+ GGL A ++++L E+ L + + R S P + + +++E+
Sbjct: 1007 GAAYIDGGLHKAQSCIVRFLP-----EIELPETKLPRPESMPMSKDHKKPHLIQQENLEN 1061
Query: 1246 KIGYEFTVKFLLQEAITHAS 1265
IGY F K LL EA+TH S
Sbjct: 1062 HIGYTFKDKTLLMEALTHPS 1081
>sp|Q1DW80|DCL2_COCIM Dicer-like protein 2 OS=Coccidioides immitis (strain RS) GN=DCL2
PE=3 SV=3
Length = 1435
Score = 190 bits (483), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 200/807 (24%), Positives = 348/807 (43%), Gaps = 95/807 (11%)
Query: 33 DGPSSSTNSINFIP----RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIK 88
DG S S ++ +P R YQL++ + R+N I ++TG+GKT IA++ I+ + ++
Sbjct: 32 DGTSKSQEAL--LPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ---RELE 86
Query: 89 SNGFKKLIIFLAPTVHLVHQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQ-CWQKEINKND 146
K + F+APTV LV QQ+ I F+ GA V W ++ W +
Sbjct: 87 RCPAHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVSHWSTKKIWDDILLNIR 146
Query: 147 VLVMTPQILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYH------KSDNK 200
+++ TPQ+LLDAL F+ L + +V DE HH + P +IM++FYH +D
Sbjct: 147 IVISTPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGL 206
Query: 201 PKVFGMTASPVVRKGVSSAMDCEGQISELESTLDSQVFTIE-DKTEMEVFVPSAKESCRF 259
P + G+TASP R + + LE L++ T + + EM FV +
Sbjct: 207 PHILGLTASPTTRAR-------QTDLEVLEINLNAVCVTPKMHREEMMQFVHMPEYRSIE 259
Query: 260 YDQSKFCGSDLKGKLEVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILY 319
Y S + KL V ++ D ++ + + K+ ++ L K
Sbjct: 260 YQPDVQNFSSIVEKLSVIINELD-----IENDPFVKFMRRRNDLKSRQRLLDALENKKTP 314
Query: 320 CLDELGLICAYEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALP-LAD-- 376
CLD+L K CL + E + + + ++ P AD
Sbjct: 315 CLDQL---------KRCLRRSRVIHRELGPWASERFLTRCIMGLKSKQTNASGPQWADWD 365
Query: 377 ----KIFLDFGFDYSKAVDLGY------ISTKLHELLQLFLSFGKSTQVLCIIFVERIIA 426
L+ + ++G +S K+H+L+ FL + I+F E
Sbjct: 366 REDNSYMLNVLSQVVSSTEMGVQNPPDELSRKVHKLID-FLVLEHVNGSIGIVFAEERTI 424
Query: 427 AKVVERFVKKVPFLTHLTVAYLTGSTTSV-------DALTPKVQKEVLESFRGGKVNLLF 479
++ + + P H+ GS+ SV + P Q ++ R GK +L+
Sbjct: 425 VIMLAQLLSLHPRTKHIKTTAFLGSSASVSRKSDITELHNPIDQSTAIDDLRTGKKDLII 484
Query: 480 ATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDT--A 537
AT V+EEG+ VP C VI FDLPK + S+IQ RGRAR+ S+F L L +R+ +
Sbjct: 485 ATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRGRARKKGSKFALFLHSEDRATSSELHL 544
Query: 538 LSRDPEACFLKACTYVKTKSYI------------VESTGASVTTDSSVNLIHRYCEMLPS 585
+ + + +L+ ++ Y+ V STGA +T ++ N + +C L S
Sbjct: 545 MEKTMKQLYLENKRALEHIQYLENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTL-S 603
Query: 586 DKYYTPKPIFKYKSAE-EAYECELTLPSN-----APFQTIVGPTSRNKNLSKQLVCLEAC 639
++ P F + + + ++ LPS F+ I+ + + ++K+ +A
Sbjct: 604 AEFIATDPEFVLEGDDTTGFSAKVILPSFLDPKLREFRGIL--LWKTEKMAKRDASFQAY 661
Query: 640 EKLHQVGALNDHLLPSVEEPSENNLISKKNESLPGAGTTKRKELHGTTPIRALSGRWGEK 699
L++ G +ND+L+P+ + + + ++ E P K L P A++ +W E
Sbjct: 662 VALYEAGLVNDYLMPAHHHIDDEDGL-EQVEKRPSFA----KALGSLNPWAAIAKKWREA 716
Query: 700 CGVILHAYKFNFACSIVTEIYSGFVLLIESELDNDVGNFELELYLVSKTVKATVSSSGQV 759
H Y+ S + + V+++ EL D+ +F L + T+ +V GQ
Sbjct: 717 K----HFYQNLIEISAGAQAFPPMVMVLPVELPCDI-SFRL-FWNEHSTLLVSVKRGGQ- 769
Query: 760 HLDADQMSKAKCFQELFFNGLFGKLFV 786
AD + A + + LF + V
Sbjct: 770 DFAADLIRLAADTTSILLSSLFSQKMV 796
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 35/277 (12%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFS 1062
+P+ + +P ++ +E+ +A++L + I H F SL+L A+++ E+ +
Sbjct: 932 LPVEYSQFALFIPCLIHSIENYFIANELAQTI-LHPVGFS-NLSLVLTAISSSAAREASN 989
Query: 1063 MERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRD 1122
+RLE LGDS+LK S L +P EG+L+ R+ V N L L +I
Sbjct: 990 YQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLANAALQTGLDKFILT 1049
Query: 1123 SAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKT 1182
F +W RP ++T ++ T+ T R M +K
Sbjct: 1050 KPFTGAKW--------RPSYNTDHINTGDM-------TEPT------------REMSTKV 1082
Query: 1183 IADCAEALIGAYYVGGGLIAALYMMKWLGIDADLEVSLVDDC--ITRASLRSYVPRINE- 1239
+AD EALIGA + GG L +K D++ S +++C I S+ N
Sbjct: 1083 LADVVEALIGAANIDGGENKILNCLKIFI--PDIKWSPLNECVNILHHQEDSFSDENNNM 1140
Query: 1240 IKDIESKIGYEFTVKFLLQEAITHASVQ-EFYCYQNL 1275
+ +IE +GY F K LL A+TH S + + YQ L
Sbjct: 1141 LSEIEGLVGYTFKKKPLLLAAVTHPSSKGSGHSYQRL 1177
>sp|A4RHU9|DCL2_MAGO7 Dicer-like protein 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=DCL2 PE=3 SV=3
Length = 1485
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 195/722 (27%), Positives = 318/722 (44%), Gaps = 108/722 (14%)
Query: 24 GSSGHDHAV------DGPSSSTNSI-NFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIA 76
GSS H+ + P S N + I R YQL++F+ + ++N I ++TG+GKT +A
Sbjct: 36 GSSASTHSTTDDAISEEPQPSGNGPRSIIARAYQLEMFQASMQQNIIVSMDTGSGKTQVA 95
Query: 77 VMLIKDIAQAIKSNGFKKLIIFLAPTVHLVHQQYDVIRVHTDFEVEE---YYGAKGVDEW 133
V+ I+ ++ +K + FLAPTV L QQY+VIR + +V G VD W
Sbjct: 96 VLRIR---AELERTPPEKRVWFLAPTVALCAQQYEVIR--SQIKVANSIVMTGDDNVDSW 150
Query: 134 -DSQCWQKEINKNDVLVMTPQILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKE 192
D Q W + V+V T IL +AL AF+++D + +V+DE H+ TG P IMK
Sbjct: 151 SDVQTWDAVLANVRVVVCTYMILFEALSHAFVTMDSISLLVMDEAHNCTGKFPGRLIMKR 210
Query: 193 FY----HKSDNKPKVFGMTASPVVRKGVSSAMD--------CEG---QISELESTLDSQV 237
FY D+ P + G+TASPV++ +SS D C G Q EL + +
Sbjct: 211 FYMPRKSAGDHVPHILGLTASPVMKSDLSSMEDLESSLDSVCRGPTLQREELFANVHQPT 270
Query: 238 FTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEV----------SWSKFDASLSK 287
T+ E ++ P F D+ V S + D L+K
Sbjct: 271 MTVTTYKECDLRSPVQYTRNMNNLHLAFENLDIAEDPYVLHLMGQRTPKSLRELDRILTK 330
Query: 288 LQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICLEKVLKAQEEC 347
L N K + K +L ++L + A Y + + + +A L L ++
Sbjct: 331 LDTYTQNQMKALQRKSSSLFRELGQW-AVDSYIYNVVEKVSNLDARSSWLGGWLDDEQR- 388
Query: 348 EIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFL 407
+L + I +ALP++ I A ++ S KL LL++
Sbjct: 389 ------------YLHRAIQGI-NALPVSAAI---------PAPEM--TSIKLQVLLRILR 424
Query: 408 SFGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHL--------TVAYLTGSTTSVDALT 459
+ S + I+FV+ A ++ + + +P + T Y++ + L
Sbjct: 425 GYEGSP--VGIVFVKERATAGILSQLLAIIPDINARYKVGCMVGTSRYMSRKMNIHEVLQ 482
Query: 460 PKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHN 519
LE FR G +NLL AT V+EEG+ VP C+ VI FD+P + S+IQ RGRAR
Sbjct: 483 QGDDLLALEKFRSGAINLLVATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRGRARMRE 542
Query: 520 SQFILMLER-SERSVTD-----TALSRDPEACF--LKACTYVKTKSYI------VESTGA 565
S+ LM+E S SV D A+ + E L V+ + + +T A
Sbjct: 543 SKLHLMIEEDSLVSVKDWGALEAAMKQRYENDMRELDHLAQVEEEDEMDVPPLHSRTTAA 602
Query: 566 SVTTDSSVNLIHRYCEMLP-SDKYYTPKPIFKYKSAEEAY---------ECELTLPSNAP 615
VT D + + +C ++ S +Y P + + A+ + LP++ P
Sbjct: 603 KVTVDDAKGHLEHFCRVVTRSQQYVDASPEYLVTTKTTAFVGGKPIPILGVTVLLPASLP 662
Query: 616 FQTIVGPTSRN---KNLSKQLVCLEACEKLHQVGALNDHLLPSVEEPSENNLISKKNESL 672
+SR+ + +K+ L+A + L++ G +N+HLLP E++ + ++ +
Sbjct: 663 PNLRQAHSSRDWISERNAKKDAALQAYKMLYEAGLINEHLLPI----RESDFVDREVDGR 718
Query: 673 PG 674
PG
Sbjct: 719 PG 720
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 129/294 (43%), Gaps = 54/294 (18%)
Query: 983 NTKKPQMHVHMPPELLVRVD-VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNF 1041
T P+ ++ PE L D VP ++V+ L+PS+ Q +E +A +L S +F
Sbjct: 943 QTSSPRRFDYIIPEQLCTFDTVPATLVQLGMLVPSITQAMEPYFVAQELLRRTALGSLDF 1002
Query: 1042 HIPSSLILEALTTLGCCESFSMERLELLGDSVLKY--AVSCHLF-LTYPKKHEGQLSARR 1098
L++ +T+ + ER+E LGD+VLK AV+C L +P EG LS +
Sbjct: 1003 K-DIDLVMMVITSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFP---EGYLSLLK 1058
Query: 1099 SWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKF 1158
V NS L K T L +I + ++W + P P
Sbjct: 1059 DRLVSNSRLCKAATALGLDQFIITRQYSLKQW---RNMLTAPEP---------------- 1099
Query: 1159 FTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAALYMM-------KWLG 1211
P + R M SKT+AD EALIGA Y+ GG+ AL + +W
Sbjct: 1100 -----------PTNT--RKMSSKTLADVTEALIGAAYIEGGMSKALRCISLMIPNERWRS 1146
Query: 1212 IDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFTVKFLLQEAITHAS 1265
+D V + + +L +P + + +E +GY F K LL EAITHAS
Sbjct: 1147 LDESRAV------LYQVALND-IPLPSTLGPLEELLGYSFNKKSLLIEAITHAS 1193
>sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 /
CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dcl2 PE=3
SV=1
Length = 1389
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 177/672 (26%), Positives = 295/672 (43%), Gaps = 72/672 (10%)
Query: 37 SSTNSINFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLI 96
+++++ + R YQL++ E + + N I ++TG+GKT IAV+ IK + S K+I
Sbjct: 7 TNSDAAAYQARNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIK---AELDSCPPDKII 63
Query: 97 IFLAPTVHLVHQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQC-WQKEINKNDVLVMTPQI 154
FLAPTV L QQ+ VI + + G V+ W Q W + V+V T +
Sbjct: 64 WFLAPTVALCTQQHKVIASNLPAVQTRTLTGLDKVELWTEQAIWDAILKDVRVVVSTYAV 123
Query: 155 LLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK------PKVFGMTA 208
L DAL F+ + + I+ DE HH H KIM++FYH + +K P++ G+TA
Sbjct: 124 LADALSHGFMRMSRLALIIFDEAHHCMRKHAANKIMQDFYHPTVSKFGPSAVPRIMGLTA 183
Query: 209 SPVVRKGVSSAMDCEGQISELESTLDSQVFTIE-DKTEMEVFVPSAKESCRFYDQSKFCG 267
SPVVR ++ +E+ LD+ T + E+ F + Y+ G
Sbjct: 184 SPVVRSN-------REELFTIETNLDAVCKTPRAHRQELLKFSHRPELKQLLYEPPDPMG 236
Query: 268 -----SDLKGKLEVSWSKFDAS----LSKLQGSQLN---CYKDMDDKHKTLRKQLSDYHA 315
L+ +E +W D + +L+ S L+ K + R+QL +
Sbjct: 237 LQVSSQTLRALIE-AWETLDIEDDPYVKRLRKSSLDGGALEKALMTGKTFCREQLKRFVD 295
Query: 316 KILYCLDELGLICAYEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLA 375
+ + +ELG A + ++ + + + + +L L S LP A
Sbjct: 296 RSRHIFEELGEWAADYYIYTSIQHLKTRVQTSYMTGDWDEAERAYLVSFL----SKLPAA 351
Query: 376 DKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVK 435
D S A L IS KL L+ FL + +IFV++ V+ +
Sbjct: 352 -----DIQITLSDAACL-RISPKLEALIG-FLDAMDDPEFSGLIFVKQRATVSVMTDLLA 404
Query: 436 KVPFLTH--LTVAYLTGSTTS------VDALTPKVQKEVLESFRGGKVNLLFATDVIEEG 487
P + AY+ S +S + L+ Q L+ FR G NL+ ATDV+EEG
Sbjct: 405 VHPRTRERFRSAAYVGWSNSSGSKDFLGNLLSMHGQLSTLDDFRSGHKNLIIATDVLEEG 464
Query: 488 MHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFL 547
+ + CS V+ +D P + S++Q RGRARQ S + +M +E S D A + E +
Sbjct: 465 IDISACSVVVCYDKPPNLKSFVQRRGRARQKQSTYAIMFP-AEDSAFDLAKWQTLEQAMI 523
Query: 548 KA----------------CTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTP 591
+A + + VEST A +T D+++ +H +C +LPS Y
Sbjct: 524 EAYQDDERHLQSAIELERVNEEVVERFTVESTSAVLTADTAMAHLHHFCAVLPSQPYVDM 583
Query: 592 KPIFKYKSAEEAYECELTLPSNAPFQTIVGPTS----RNKNLSKQLVCLEACEKLHQVGA 647
+P+F ++ + + N + R + + + +A + L++ G
Sbjct: 584 RPVFSVETDIANLRRGIVILPNCVHPKVRRSEGQRWWRTERAAMKEAAFQAYKSLYEFGL 643
Query: 648 LNDHLLPSVEEP 659
+ND+LLP +P
Sbjct: 644 VNDNLLPLTNKP 655
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 1017 VMQRLESLMLASQLREEINCHSRNFHIPSSL-ILEALTTLGCCESFSMERLELLGDSVLK 1075
V+Q+LE+ ++A++L E I R+ S+ I+ A++ + +R E LGDS+LK
Sbjct: 910 VVQQLETELIATKLYETI---LRDVGFTSTQHIITAISAPSAQALTNYQRYEFLGDSILK 966
Query: 1076 YAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPGQ 1135
++VSC LF +P HEG LS R V N L K D L ++ F PR+W AP
Sbjct: 967 FSVSCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSAP-- 1024
Query: 1136 LSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYY 1195
++ + V GK R + SK +AD EALIGA Y
Sbjct: 1025 ----------------------LISERLERVAGK------RQVSSKVLADVVEALIGAAY 1056
Query: 1196 VGGGLIAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPR--INEIKD-IESKIGYEFT 1252
+ GG AA ++ + +L TR RS P I D ++ I Y F
Sbjct: 1057 MDGGHAAAQACIRRFLPEINLH-----SLDTRTLSRSVAPEGARQTIHDRLKRHISYTFE 1111
Query: 1253 VKFLLQEAITHASVQEFYCYQNLYKHLQHCSTLLLSQI 1290
+ LL EA+TH S ++ Y+ L+ +L I
Sbjct: 1112 NESLLVEALTHPSC-DYDASTQSYQRLEFLGDAVLDMI 1148
>sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=dcl2-2 PE=3 SV=2
Length = 1362
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 185/691 (26%), Positives = 302/691 (43%), Gaps = 94/691 (13%)
Query: 25 SSGHDHAVDGPSSSTNSINFIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIA 84
+S D+ D +T+++ R YQL++ + +RN I V+ TG GKT +A++ I +A
Sbjct: 2 TSSTDYHADSTPGTTSNMELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVAILRI--LA 59
Query: 85 QAIKSNGFKKLIIFLAPTVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINK 144
K N K + L PTV L QQY I+ T F GA+ D W ++
Sbjct: 60 DIDKGNS-DKFVWLLCPTVALSEQQY--IQYATVFLPS---GAE-----DKAIWDNALSG 108
Query: 145 NDVLVMTPQILLDALRKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKS-----DN 199
+ V T Q+L DAL F+ L + ++ DE HH +H KIM+ YHK N
Sbjct: 109 IKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHCKKDHVANKIMQVHYHKQHQSGVQN 168
Query: 200 KPKVFGMTASPVVRKGVSSAMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKE---- 255
PK+ G+TASP + +SS E + + T + T + +P
Sbjct: 169 LPKILGLTASP-ILSDLSSLEIVESNLGSICKTPRQYYAQLLQFTNRPLILPRLPTYTIP 227
Query: 256 --SCRFYDQSKFCGSDLKGKLEVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDY 313
S + K CG L + EV S SK++ QL + +++ +
Sbjct: 228 NCSVKAPILEKLCGI-LSSEDEV------PSSSKMKSKQLKHIRRFMQTSESINQ----- 275
Query: 314 HAKILYCLDELGLICAYEAVKICLEKVLKAQEECEIYRQSSLQCKY---FLEEVLHVIGS 370
ELG+ A E ++ + ++ +E + + + Y F E+L +G
Sbjct: 276 ---------ELGIWAATEYMR---KSIMHFKESMRMGAEKTNISNYGKDFAMEILTRLGK 323
Query: 371 ALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVV 430
D S A+ IS LL LS ++FV + +
Sbjct: 324 LQ------------DCSPAIQPEEISPMCQCLLDE-LSKAYREGFCGLVFVTQRATVLAL 370
Query: 431 ERFVKKVPFLTHL-TVAYLTGSTTSVDALTP-------KVQKEVLESFRGGKVNLLFATD 482
+ ++ P +HL T G +T+ + T + Q E LE FR G +NL+ TD
Sbjct: 371 KWLIENHPLTSHLFTCGTFIGMSTTQYSKTELGNLHDIRNQTETLEKFRQGSLNLIITTD 430
Query: 483 VIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLE---------RSERSV 533
+EEG+ VP C+ V+ F+ ++ S+IQ RGRAR+ NSQFI+++E R E
Sbjct: 431 ALEEGIDVPACNTVLNFNCQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEE 490
Query: 534 TD------TALSRDPEACFLKACTYVKTK-SYIVESTGASVTTDSSVNLIHRYCEMLPSD 586
+ A R A L Y + S ++ TGA + +V ++ +C LP+
Sbjct: 491 IELVQKLQNAERRQIPANELDFDKYERISLSLDIDRTGAQLIMREAVGYLYNFCSKLPAQ 550
Query: 587 KYYTPKPIFKYKSAEEA-YECELTLPSNA-PFQTIVGPTSRNKNL--SKQLVCLEACEKL 642
Y + KP+F Y+ + + LPSN P + L +++ L+A + L
Sbjct: 551 LYVSNKPLFTYERNNYGRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKAL 610
Query: 643 HQVGALNDHLLPS-VEEPSENNLISKKNESL 672
+Q G +ND+L+P+ V + E ++I + + S+
Sbjct: 611 YQAGLVNDYLVPTQVSDHLEGDIIFRSHYSI 641
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 31/253 (12%)
Query: 1015 PSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTTLGCCESFSMERLELLGDSVL 1074
PS+ +E M+A LR+E++ S L+ A+ + L +GD+ +
Sbjct: 877 PSISHEVEVYMIAQILRQELSLRSVTPWQRIDLLAIAIRPTSIEHRATFRLLAFIGDAFM 936
Query: 1075 KYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWVAPG 1134
KY + LFL + HEG LS+ + + ++ L L ++ + +RWV P
Sbjct: 937 KYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGKFLISKHLNGKRWVPPL 996
Query: 1135 QLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAY 1194
+ P E R +G+ T+AD +A++GA
Sbjct: 997 VSGIEPASNEA----------------------------RQRSIGAATLADMTKAVVGAA 1028
Query: 1195 YVGGGL--IAALYMMKWLGIDADLEVSLVDDCITRASLRSYVPRINEIKDIESKIGYEFT 1252
+ GGL AA + + + + SL D ++ + V I D+E +GY FT
Sbjct: 1029 FTDGGLNQAAACASVMFPKLKSWNASSLHDGTYSKTRPENAVAS-TAIVDMEELLGYTFT 1087
Query: 1253 VKFLLQEAITHAS 1265
K L E++TH S
Sbjct: 1088 DKSLAVESMTHPS 1100
>sp|Q7SCC1|DCL2_NEUCR Dicer-like protein 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dcl-2
PE=2 SV=3
Length = 1540
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 174/664 (26%), Positives = 286/664 (43%), Gaps = 97/664 (14%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLV 106
R YQL++FE + ++N I L + + M+A D + +G I FL PTV L
Sbjct: 72 RAYQLEMFEASLKQNIIVAL--FSDRVMVA-----DGHWQWQDSG---RIWFLTPTVALA 121
Query: 107 HQQYDVIRVHT-DFEVEEYYGAKGVDEWDSQC-WQKEINKNDVLVMTPQILLDALRKAFL 164
QQ+ V++ + G GVD W Q W + ++V T QIL DA +F+
Sbjct: 122 RQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSFV 181
Query: 165 SLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK----PKVFGMTASPVVRKGVSSAM 220
LD + IVIDE H+ +G+HP ++M E Y + P + G+TASP+ ++
Sbjct: 182 RLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPLKSNNLAD-- 239
Query: 221 DCEGQISELESTLDS--QVFTIEDKTEMEVFVPSAKESCRFYDQSKF--CGSDLKGKLEV 276
I +LE LD+ + TI + E+ V + Y S +DL +
Sbjct: 240 -----IEKLEQVLDAVCRTPTIH-REELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRFLE 293
Query: 277 SWSKFDAS------LSKLQGSQ--LNCYKDMDDKHKTL-RKQLSDYHAKILYCLDELGLI 327
++ + D S L K Q ++ + M K TL +K+L + + L E+G
Sbjct: 294 AYHRLDISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYNRALLVRREIGPW 353
Query: 328 CAYEAVKICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYS 387
A + + +L E E Q ++ E L I +P K +
Sbjct: 354 AADYYLTRTVSHMLAELERGEPPAQHR-----YIGEALRSI--PIPAISKEPIQ------ 400
Query: 388 KAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKKVPFL------- 440
+S K+ LL++ S + + I+FV+ + +V + P
Sbjct: 401 -------LSPKVQTLLKVLASHQQDP--VGIVFVKERVMVSIVTHIISTHPLTKDRYRTA 451
Query: 441 THLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFD 500
+ + A + G + +T K LE FR G+ NLL AT V+EEG+ VP C+ VI FD
Sbjct: 452 SMIGTASVPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFD 511
Query: 501 LPKTVSSYIQSRGRARQHNSQFILMLER-SERSVTD-------------TALSRDPEACF 546
P + S+IQ RGRAR+ +S LM++ S S TD + ++ E
Sbjct: 512 EPSNIKSFIQRRGRAREVSSTLYLMVQNASSESATDWHNLERLMKERYEDEMRQNAELEL 571
Query: 547 LKACTYVKTKSYIVESTGASVTTDSSVNLIHRYCEMLPS-DKYYTPKPIFKYKSA----- 600
L VESTGA +T + + ++ +C + S +Y +P F +
Sbjct: 572 LDDPRIGSYPVLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYFVIRQVNPDPA 631
Query: 601 ----EEAYECELTLPSN-AP----FQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDH 651
+ + LP++ AP +++ TS + L+ +A + L+ G +N++
Sbjct: 632 SPGRRTLLQATVHLPASLAPDLRRHESLWTWTS--EKLAIMDASFQAYKALYNAGLVNEN 689
Query: 652 LLPS 655
LLP+
Sbjct: 690 LLPT 693
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 153/360 (42%), Gaps = 73/360 (20%)
Query: 995 PELLVRVD-VPISVVKSLYLLPSVMQRLE-SLMLASQLREEINCHSRNFHIPSSLILEAL 1052
P +R+D P + ++P+ + +E SL+ A + + C + ++P LI AL
Sbjct: 930 PSTQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLD-NLP--LITTAL 986
Query: 1053 TTLGCCESFSMERLELLGDSVLKY-------AVSCHLFLTYPKKHEGQLSARRSWAVCNS 1105
+ G + ERLE +GD++LK+ A+S H + P HE LS + V N
Sbjct: 987 ISSGSRGPTNYERLEFIGDTILKFCACLTASALSAHHSIV-PNHHERLLSQWKDKLVNNV 1045
Query: 1106 TLHKLGTDRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKV 1165
L + D L YI +SA ++W RP E +D ++ P+ +
Sbjct: 1046 RLCRASRDFGLDEYIINSAAS-KKW--------RPKFVEDYMDEMKSPISAET------- 1089
Query: 1166 VVGKPCDMGHRWMGSKTIADCAEALIGAYYVGGGLIAAL------------YMMKWLGID 1213
R M SK +AD E+LIGA Y+ GG+ AL KW I+
Sbjct: 1090 ----------RQMSSKMVADVVESLIGAAYMCGGMSKALECVALLLPTPKSSQFKWQEIE 1139
Query: 1214 ADLEVSLVDDCITRASLRSYVPR----INEIKDIESKIGYEFTVKFLLQEAITHASVQEF 1269
++R L + P+ +++ +E + Y F K LL EA+TH S
Sbjct: 1140 -----------LSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLIEAMTHPSCAGL 1188
Query: 1270 YCYQNLYKHLQHCSTLLLSQITEYVKSFPKPGETTDSGPSMKAPKALGDLLESIVGAVLI 1329
++ Y+ L+ +L I VK ++GP+ A + + L S+V A ++
Sbjct: 1189 GTNESCYERLEFLGDAILDVIV--VKRL-----MAETGPNELAHNDMHEHLSSVVTADIM 1241
>sp|Q2VF19|DCL1_CRYPA Dicer-like protein 1 OS=Cryphonectria parasitica GN=DCL-1 PE=3 SV=1
Length = 1548
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 13/205 (6%)
Query: 46 PRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKD-IAQAI--KSNGF-KKLIIFLAP 101
PR YQ+++FE AK++NTIAVL+TG+GKT+IA +L+ + Q + ++ G +++ FL
Sbjct: 99 PRDYQMELFERAKQQNTIAVLDTGSGKTLIAALLLDHTVNQELEDRAKGLPRRIAFFLVE 158
Query: 102 TVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRK 161
V L QQ+ V+ + V + G + W W+ ++ ++V+V T +IL L+
Sbjct: 159 KVALAFQQHAVLECNLAHSVAVFSGESIKNTWTKGFWETQLADHEVIVCTAEILNQCLQY 218
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNK----PKVFGMTASPVVRKGVS 217
A++ +D + +V DE HH NHPY +I+K++Y ++ P++FGMTASP V
Sbjct: 219 AYIRIDQINLLVFDEAHHTKKNHPYARIIKDYYASGKDRGLRLPRIFGMTASP-----VD 273
Query: 218 SAMDCEGQISELESTLDSQVFTIED 242
+ +D ELE L S++ T D
Sbjct: 274 ALIDVRQAAIELEGLLHSRIATTAD 298
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 139/289 (48%), Gaps = 29/289 (10%)
Query: 393 GYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVKK-VPFLTHLTVAYLTGS 451
G +S+KL L +L + + + CI+FVER AK++ F + + L V L G+
Sbjct: 420 GLLSSKLKTLSKLLEEYFTDSSIRCIVFVERRWTAKLLTDFFESHAAEIPGLKVGSLMGA 479
Query: 452 TTSVDALTPKVQKEV--LESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYI 509
+ ++++ + SF+ G N +FAT V EEG+ +P+C+ +IRFD+ KT+ YI
Sbjct: 480 NAEGGSSQTSFREQIRTILSFKKGNTNCIFATSVAEEGLDIPDCNLIIRFDICKTMIQYI 539
Query: 510 QSRGRARQHNSQFILMLE---------RSERSVTDTALSR----DPEACFLKACTY---- 552
QSRGRARQ +S +I ++E + + + L R PE LK Y
Sbjct: 540 QSRGRARQADSTYIHLIEGGNGDHRRIMHQNAENEKLLRRFCNTQPEDRLLKGSDYDMDF 599
Query: 553 -----VKTKSYIVESTGASVTTDSSVNLIHRYCEMLPSDKYYTPK----PIFKYKSAEEA 603
+ Y ++STGA +T +S+ ++ + L + Y + S +
Sbjct: 600 FLRQERNQRQYTIKSTGARLTYKNSLPILQAFLNTLRNQDDYAEGMDLVADYSILSVQGG 659
Query: 604 YECELTLPSNAPFQTIVGPTSRNKNLSKQLVCLEACEKLHQVGALNDHL 652
+ CE+ +P +P + +G K ++K E C +L Q L+DHL
Sbjct: 660 FICEVMMPPLSPVTSAIGKVYSTKQVAKCSAAFELCFQLIQKKFLDDHL 708
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 86/217 (39%), Gaps = 52/217 (23%)
Query: 1003 VPISVVKSLYLLPSVMQRLESLMLASQLREEINCHSRNFHIPSSLILEALTT-------- 1054
+P+ VV YLLPS++ R+E ++A C I L LEALT
Sbjct: 1007 LPVDVVAMAYLLPSIIHRIEQNLIALDA-----CRLLQLDIHPDLALEALTKDSDNQGED 1061
Query: 1055 --LGCCESF-----------SMERLELLGDSVLKYAVSCHLFLTYPKKHEGQLSARRSWA 1101
+ ++F + ERLELLGDS LK A + +F P K E R
Sbjct: 1062 ERMDSIQAFEPVNFQPGMGANYERLELLGDSFLKMATTIAVFTLIPNKDEFDYHCERMVM 1121
Query: 1102 VCNSTLHKLGT--DRKLQGYIRDSAFDPRRWVAPGQLSLRPVPCECGVDTLEVPLDGKFF 1159
+CN L + D KL YIR +F+ W +L GK
Sbjct: 1122 ICNQNLFGVAKSDDLKLHEYIRSKSFERGTWYPVLKLEF-----------------GKTH 1164
Query: 1160 TQDTKVVVGKPCDMGHRWMGSKTIADCAEALIGAYYV 1196
+ K M + K+IAD EALIGA Y+
Sbjct: 1165 LKTLK-------QMDEHRLADKSIADVCEALIGAAYM 1194
>sp|Q9GLV6|DDX58_PIG Probable ATP-dependent RNA helicase DDX58 OS=Sus scrofa GN=DDX58
PE=2 SV=1
Length = 940
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 242/528 (45%), Gaps = 72/528 (13%)
Query: 46 PRIYQLKVFEVAKR-RNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVH 104
PR YQL++ A+ +NTI TG GKT +++++ + + G K ++F A +
Sbjct: 241 PRKYQLELALPAQNGKNTIICAPTGCGKTFVSLLICEHHLKKF-PRGRKGKVVFFAIQLP 299
Query: 105 LVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKAFL 164
+ QQ V H + + G G D+ C ++ + +D++++TPQIL++ L +
Sbjct: 300 VYEQQKSVFSKHFERLGYKVAGISGATS-DTVCVEQIVENSDIIILTPQILVNCLTNGTI 358
Query: 165 -SLDIVCFIVIDECHHATGNHPYTKIMKEFYHK-----SDNKPKVFGMTASPVVRKGVSS 218
SL + ++ DECH+ + HPY IM + + SD+ P+V G+TAS V +
Sbjct: 359 PSLSVFTLMIFDECHNTSKQHPYNVIMFSYLDRKLGGSSDSLPQVIGLTASVGVGDAKNK 418
Query: 219 AMDCEGQISELESTLDSQVF-TIEDK-TEME--VFVPSA---KESCRFYDQSKFCGSDLK 271
A E I +L ++LD+ V T+ D E+E V+ P K R D+ K S L
Sbjct: 419 AEATE-YICKLCASLDTSVIATVRDNLEELEEVVYKPQKFFRKVELRTTDRFKCIISQLM 477
Query: 272 GKLE-VSWSKFD-------ASLSKLQGSQLNCYK---------------DMDDKHKTLR- 307
++E ++ S F+ L ++Q S K M DK K R
Sbjct: 478 MEIESLAKSIFEELGTITLGGLFQIQNSNFGTQKYEQWIVKVQKECAVFQMPDKDKESRI 537
Query: 308 -KQLSDYHAKILYCLDELGLICAYEAVKICLE------KVLKAQEECEIYRQSSLQCKYF 360
K L Y + + D L +I + +K L+ + ++A EI + + + +
Sbjct: 538 CKALFSYMSHLRIYNDAL-IINEHARMKDALDYLKDFFRNIRAAGFDEIEQDLTQRFEEK 596
Query: 361 LEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIF 420
L+E+ + I +D + K DL +I + + L + + I+F
Sbjct: 597 LQEL-----------ESISIDPSNENPKLRDLCFILQEEYHL---------NPETRTILF 636
Query: 421 VERIIAAKVVERFVKKVPFLTHLTVAYLT--GSTTSVDALTPKVQKEVLESFRGGKVN-L 477
V+ +++++K+ P L+ L + LT G T +T QK VL++FR K N +
Sbjct: 637 VKTRALVDALKKWIKENPKLSFLKPSILTGRGKTNQNIGMTLPAQKCVLDTFRTDKDNKI 696
Query: 478 LFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILM 525
L T V +EG+ + C+ VI ++ V IQ+RGR R S+ L+
Sbjct: 697 LITTSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 744
>sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=dcl2 PE=3 SV=2
Length = 1377
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 11/178 (6%)
Query: 44 FIPRIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTV 103
F PR YQ ++FE + + N I ++TG+GKT +A++ I + +++ +KLI FLAPTV
Sbjct: 14 FCPRNYQTEMFEASLQENIIVAMDTGSGKTHVALLRIMN---ELETRRPQKLIWFLAPTV 70
Query: 104 HLVHQQYDVIRVHTD-FEVEEYYGAKGVDEWDSQC-WQKEINKNDVLVMTPQILLDALRK 161
L QQ+DVI + + G V+ W Q W + V+V T +L DA+
Sbjct: 71 ALCFQQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSN 130
Query: 162 AFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKS------DNKPKVFGMTASPVVR 213
F+ + + ++ DE HH HP +IM++FYH + D P + G+TASPVVR
Sbjct: 131 GFVRVSQLGLLIFDEAHHCMRRHPANRIMQDFYHPTLVKQGPDAVPGILGLTASPVVR 188
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 33/228 (14%)
Query: 458 LTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQ 517
L+ ++Q++ L FR G+ NL+ ATDV+EEG+ + CS VI +D P V S++Q RGRAR+
Sbjct: 434 LSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANVKSFVQRRGRARR 493
Query: 518 HNSQFIL---------------MLERSERSVTDTALSRDPEACFLKACTYVKTKSYIVES 562
S F + +LE + + EA L+ V T+ + VES
Sbjct: 494 KESTFAILFSTDDELCDLRKWQLLEEAMIEAYQDDERKRCEALALETMAEVVTERFEVES 553
Query: 563 TGASVTTDSSVNLIHRYCEMLPSDKYYTPKPIFKYKSAEEAYECELTLPSNAPFQ--TIV 620
TGA +T D++V +H +C +LP Y +P E ++E + T F+ + V
Sbjct: 554 TGAVLTADTAVARLHHFCSILPQQPYVDNRP-------ELSFEYDGTGRRRGTFKLPSCV 606
Query: 621 GPTSR---------NKNLSKQLVCLEACEKLHQVGALNDHLLPSVEEP 659
P R + + + + C++L++ G LNDHLLP +P
Sbjct: 607 HPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGLLNDHLLPLTRKP 654
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 44/280 (15%)
Query: 1013 LLPSVMQRLESLMLASQLREEINCHSRNFHIPSSL-ILEALTTLGCCESFSMERLELLGD 1071
+ +++ RLE+ ++A++L E I ++ S+ ++ A++ +R E GD
Sbjct: 902 FISAILDRLEATLIATRLCETI---LQDVQFSSTRHVITAISAPTAQSPTDYQRYEFFGD 958
Query: 1072 SVLKYAVSCHLFLTYPKKHEGQLSARRSWAVCNSTLHKLGTDRKLQGYIRDSAFDPRRWV 1131
SVLK+ VSC L++ +P EG LS R V N+ L + D L +I F PR+W
Sbjct: 959 SVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAALDVGLDAFILTRRFTPRKWT 1018
Query: 1132 APGQLSLRPVPCECGVDTLEVPLDGKFFTQDTKVVVGKPCDMGHRWMGSKTIADCAEALI 1191
AP ++ V GK R + SK +AD E+LI
Sbjct: 1019 AP------------------------LISEKAVEVAGK------RPLSSKVLADVVESLI 1048
Query: 1192 GAYYVGGGLIAALYMMKWLGIDADLEVSLVDDC-ITRASLRSYVPRINEIKDIESKIGYE 1250
GA Y+ GG A ++ L + ++ C IT + P + ++ +GY
Sbjct: 1049 GAAYMDGGQAKAHTCIRRL-------LPEIEICPITPPPVHESAPHVMN-DSLKQHLGYT 1100
Query: 1251 FTVKFLLQEAITHASVQEFYCYQNLYKHLQHCSTLLLSQI 1290
F + LL EA+TH S + Q+ Y+ L+ +L +
Sbjct: 1101 FVNEALLVEALTHPSCRSDASTQS-YQRLEFLGDAVLDMV 1139
>sp|O95786|DDX58_HUMAN Probable ATP-dependent RNA helicase DDX58 OS=Homo sapiens GN=DDX58
PE=1 SV=2
Length = 925
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 137/540 (25%), Positives = 238/540 (44%), Gaps = 75/540 (13%)
Query: 35 PSSSTNSIN----FIPRIYQLKV-FEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKS 89
P S + N F PR YQL++ K +NTI TG GKT +++++ + +
Sbjct: 228 PPSEVSDTNLYSPFKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKF-P 286
Query: 90 NGFKKLIIFLAPTVHLVHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLV 149
G K ++F A + + QQ V + + G G + Q + ND+++
Sbjct: 287 QGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQI-VENNDIII 345
Query: 150 MTPQILLDALRKAFL-SLDIVCFIVIDECHHATGNHPYTKIMKEFYHK-----SDNKPKV 203
+TPQIL++ L+K + SL I ++ DECH+ + HPY IM + + S P+V
Sbjct: 346 LTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQV 405
Query: 204 FGMTASPVV--RKGVSSAMDCEGQISELESTLD-SQVFTIE---DKTEMEVFVPSA---K 254
G+TAS V K A+D I +L ++LD S + T++ ++ E V+ P K
Sbjct: 406 IGLTASVGVGDAKNTDEALD---YICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRK 462
Query: 255 ESCRFYDQSKFCGSDLKGKLEVSWSKF---DASLSKLQGSQLNCYK-------------- 297
R D+ K+ + L E + +LS++Q + K
Sbjct: 463 VESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMV 522
Query: 298 -DMDDKHKTLR--KQLSDYHAKILYCLDELGLICAYEAVKICLEKV------LKAQEECE 348
M DK + R K L Y + + D L +I + +K L+ + ++A E
Sbjct: 523 FQMPDKDEESRICKALFLYTSHLRKYNDAL-IISEHARMKDALDYLKDFFSNVRAAGFDE 581
Query: 349 IYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDFGFDYSKAVDLGYISTKLHELLQLFLS 408
I + + + + L+E+ + + D + K DL +I + + L
Sbjct: 582 IEQDLTQRFEEKLQEL-----------ESVSRDPSNENPKLEDLCFILQEEYHL------ 624
Query: 409 FGKSTQVLCIIFVERIIAAKVVERFVKKVPFLTHLTVAYLTG--STTSVDALTPKVQKEV 466
+ + + I+FV+ ++ +++ P L+ L LTG T +T QK +
Sbjct: 625 ---NPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCI 681
Query: 467 LESFRG-GKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILM 525
L++F+ G N+L AT V +EG+ + C+ VI ++ V IQ+RGR R S+ L+
Sbjct: 682 LDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL 741
>sp|Q8R5F7|IFIH1_MOUSE Interferon-induced helicase C domain-containing protein 1 OS=Mus
musculus GN=Ifih1 PE=1 SV=1
Length = 1025
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 150/574 (26%), Positives = 246/574 (42%), Gaps = 85/574 (14%)
Query: 47 RIYQLKVFEVA-KRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHL 105
R YQ++V + A +N I L TG+GKT +AV + KD K +I L V L
Sbjct: 310 RPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLVNKVML 369
Query: 106 VHQQYDVIRVHTDFEVEEYYGAKGVDEWDSQ---CWQKEINKNDVLVMTPQILLDAL--- 159
Q + R + ++++Y G+ D+Q + + + DV++ T QIL ++L
Sbjct: 370 AEQ---LFRKEFNPYLKKWYRIIGLS-GDTQLKISFPEVVKSYDVIISTAQILENSLLNL 425
Query: 160 ---RKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYH--------KSDNKP-----KV 203
+ L I+IDECHH Y IM+ + K NKP ++
Sbjct: 426 ESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAIPLPQI 485
Query: 204 FGMTASPVVRKGVSSAM---DCEGQISELESTLDSQVFTIED-KTEMEVFVPSAKESCRF 259
G+TASP GV +A + E I + + LD+ FTI+ K + KE C+
Sbjct: 486 LGLTASP----GVGAAKKQSEAEKHILNICANLDA--FTIKTVKENLGQLKHQIKEPCK- 538
Query: 260 YDQSKFCGSD------LKGKL------------EVSWSKFDASLSKLQGSQLN--CYKDM 299
KF +D K KL + S F + Q+ KD
Sbjct: 539 ----KFVIADDTRENPFKEKLLEIMASIQTYCQKSPMSDFGTQHYEQWAIQMEKKAAKDG 594
Query: 300 DDKHKTLRKQLSDYHAKILYCLDELGLICAYEAVKICL----EKVLKAQEECEIYRQSSL 355
+ K + + L Y+ + L D + +I AY ++ EK + + +
Sbjct: 595 NRKDRVCAEHLRKYN-EALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSDKSDDEAS 653
Query: 356 QCKYFLEEVLHVIGSALPL--ADKIFLDFGFDYSK-----AVDLGYISTKLHELLQLFL- 407
C +++ + +L L D+ ++ FD K A + Y + KL +L L
Sbjct: 654 SCN---DQLKGDVKKSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILE 710
Query: 408 SFGKSTQV-LCIIFVERIIAAKVVERFVKKVPFLTHLTVA--YLTGS--TTSVDALTPKV 462
F +S + IIF + + + +++ + + V +L G+ ++ V +T
Sbjct: 711 QFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTE 770
Query: 463 QKEVLESFRGGKVNLLFATDVIEEGMHVPNCSYVIRFDLPKTVSSYIQSRGRARQHNSQF 522
QKEV+ FR G++NLL AT V EEG+ + C+ VIR+ L + +Q+RGRAR S +
Sbjct: 771 QKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTY 830
Query: 523 ILMLERSERSVTDTALSRD-PEACFLKACTYVKT 555
+L+ S VT+ + D E KA V+
Sbjct: 831 VLVTS-SGSGVTEREIVNDFREKMMYKAINRVQN 863
>sp|Q2HG76|MPH1_CHAGB ATP-dependent DNA helicase MPH1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=MPH1 PE=3 SV=1
Length = 1134
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 130/565 (23%), Positives = 227/565 (40%), Gaps = 81/565 (14%)
Query: 47 RIYQLKVFEVAKRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHLV 106
R YQ + + NT+ L TG GKT IA ++ + + K + I+F+APT L
Sbjct: 188 RDYQFSIVKNGLFHNTLVALPTGLGKTFIAATIMLNYFRWTK----RSKIVFVAPTKPLA 243
Query: 107 HQQYD-------VIRVHTDFEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDAL 159
QQ + R E EW+S+ + MTPQ L++ L
Sbjct: 244 SQQVQACLGIAGIPRSQATLLTGETPPVLRQGEWESKR---------LFFMTPQTLMNDL 294
Query: 160 RKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFYHKSDNKPKVFGMTASP-VVRKGVSS 218
K + + +V+DE H ATG++ Y K++ EF + ++ +TA+P +GV
Sbjct: 295 SKGYADPKSIVLLVVDEAHRATGDYAYVKVV-EFIRRFSKSIRILALTATPGSTVEGVQD 353
Query: 219 AMDCEGQISELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKGKLEVSW 278
+D G IS +E E+ ++ +V S R D F SD ++ +
Sbjct: 354 IIDNLG-ISHVE-------IRTEESIDIRQYVHS-----RNIDTVTFDPSDEMHEVRGLF 400
Query: 279 SKFDASLSKLQGSQLNCYKDMDDKHKT---LRKQLSDY------HAK------------I 317
SK L +Q N Y D + T L K ++ HA I
Sbjct: 401 SKALKPLVDKLSAQ-NIYYGRDPMNLTTFGLLKSRQEWLAGPGGHANQGVKFMMMAVFSI 459
Query: 318 LYCLDELGLICAYEAVKICLEKV--LKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLA 375
L L L + + +K + ++ EE + + S L+ + +E + + +
Sbjct: 460 LQSLAHLIKLLNFHGIKPFYNGLAEFRSSEEGKPGQGSKLKRQLLADESFQRMMALIERW 519
Query: 376 DKIFLDFGFDYSKAVDLGYISTKLHELLQLFLSFGKSTQVLCIIFVERIIAAKVVERFVK 435
++ +++ L Y+ L+ F+ G+++ I+F E +A+ + R +
Sbjct: 520 MRM-----EEFNGHPKLTYL---CETLVNHFIDAGENSNTRAIVFSEYRDSAEEIVRLLN 571
Query: 436 KVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVPNCSY 495
P L TV + + + K Q E +E F+ G N+L AT + EEG+ +
Sbjct: 572 NQP-LIRATVFVGQADSKRSEGMKQKQQIETIEKFKNGGFNVLVATSIGEEGLDIGQVDL 630
Query: 496 VIRFDLPKTVSSYIQSRGR-ARQHNSQFILMLERSERSVTDTALSRDPEACFLKAC-TYV 553
++ +D + +Q GR R+ +L+L + + E FL+A Y
Sbjct: 631 IVCYDASASPIRMLQRMGRTGRKRAGNIVLLLMKGKE-----------EEKFLEAKDNYQ 679
Query: 554 KTKSYIVESTGASVTTDSSVNLIHR 578
K + I G + D S ++ R
Sbjct: 680 KMQQLICNGDGFTFRHDLSTRIVPR 704
>sp|Q99J87|DHX58_MOUSE Probable ATP-dependent RNA helicase DHX58 OS=Mus musculus GN=Dhx58
PE=1 SV=2
Length = 678
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 137/543 (25%), Positives = 225/543 (41%), Gaps = 70/543 (12%)
Query: 47 RIYQLKVFEVA-KRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHL 105
R YQ +V A + +N I L TGAGKT A + K + + ++ L VHL
Sbjct: 4 RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK----VVVLVNRVHL 59
Query: 106 VHQQYDVIRVHTD--FEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDALRKA- 162
V Q + R D + V G G + +D+L+ T ++L AL +
Sbjct: 60 VSQHAEEFRRMLDKHWTVTTLSGDMG----SRAGFGLMARSHDLLICTAELLQLALNSSE 115
Query: 163 ---FLSLDIVCFIVIDECHHATGNHPYTKIMKEFYH----KSDNKPKVFGMTASPVVRKG 215
+ L IV+DECHH + Y I+ + K++ P+V G+TASP G
Sbjct: 116 EDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEPLPQVLGLTASP----G 171
Query: 216 VSSAMDCEGQIS---ELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKG 272
A +G I +L + LD+ + K + + C+ YD + D G
Sbjct: 172 TGGATKLQGAIDHILQLCANLDT-CHIMSPKNCYSQLLMHNPKPCKQYDLCQRRAQDPFG 230
Query: 273 KLEVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLD--ELGL---- 326
L + KL +Q++ +M D + Q+ + + C D E GL
Sbjct: 231 DL----------IKKLM-NQIHQQLEMPDLKQQFGTQMYEQQV-VQLCKDAAEAGLQEQR 278
Query: 327 ICAYEAVK----ICLEKVLKAQEECEIYRQSSLQCKYFLEEVLHVIGSALPLADKIFLDF 382
+ A + + + ++A++ ++ LQ Y E + + A+ L
Sbjct: 279 VYALHLRRYNDALFIHDTVRARDALDM-----LQDFYDRERT---TKTQMVRAESWLLKL 330
Query: 383 GFDYSKAVDLGYIST------KLHELLQLFL-SFGKSTQVLCIIFVERIIAAKVVERFVK 435
FD K V LG ++ KL L ++ L FG IIF A + +++
Sbjct: 331 -FDDHKNV-LGQLAARGPENPKLEMLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLR 388
Query: 436 KVPFLTHLTVA----YLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVP 491
+ P L + + G+T+ +T K Q+EV++ FR G ++LL AT V EEG+ +
Sbjct: 389 QQPCLQTVGIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIA 448
Query: 492 NCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFLKACT 551
C+ V+R+ L S +Q+RGRAR S + + R + + E KA
Sbjct: 449 QCNVVVRYGLLTNEISMVQARGRARAGQSVYSFLATEGSREMKRELTNEALEVLMEKAVA 508
Query: 552 YVK 554
V+
Sbjct: 509 AVQ 511
>sp|Q96C10|DHX58_HUMAN Probable ATP-dependent RNA helicase DHX58 OS=Homo sapiens GN=DHX58
PE=1 SV=1
Length = 678
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 235/543 (43%), Gaps = 70/543 (12%)
Query: 47 RIYQLKVFEVA-KRRNTIAVLETGAGKTMIAVMLIKDIAQAIKSNGFKKLIIFLAPTVHL 105
R YQ +V A + +N I L TGAGKT A + K + + +G K ++ L VHL
Sbjct: 4 RSYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETV--DGAK--VVVLVNRVHL 59
Query: 106 VHQQYDVIRVHTD--FEVEEYYGAKGVDEWDSQCWQKEINKNDVLVMTPQILLDAL---- 159
V Q + R D + V G G + +D+L+ T ++L AL
Sbjct: 60 VTQHGEEFRRMLDGRWTVTTLSGDMG----PRAGFGHLARCHDLLICTAELLQMALTSPE 115
Query: 160 RKAFLSLDIVCFIVIDECHHATGNHPYTKIMKEFY----HKSDNKPKVFGMTASPVVRKG 215
+ + L + IV+DECHH + Y IM ++ ++ P+V G+TASP G
Sbjct: 116 EEEHVELTVFSLIVVDECHHTHKDTVYNVIMSQYLELKLQRAQPLPQVLGLTASP----G 171
Query: 216 VSSAMDCEGQIS---ELESTLDSQVFTIEDKTEMEVFVPSAKESCRFYDQSKFCGSDLKG 272
A +G I+ +L + LD+ + + +++ C+ Y+ D G
Sbjct: 172 TGGASKLDGAINHVLQLCANLDTWCI-MSPQNCCPQLQEHSQQPCKQYNLCHRRSQDPFG 230
Query: 273 KLEVSWSKFDASLSKLQGSQLNCYKDMDDKHKTLRKQLSDYHAKILYCLDELGLICAYEA 332
L L KL Q++ + +M + + Q+ Y +++ L E + +
Sbjct: 231 DL----------LKKLM-DQIHDHLEMPELSRKFGTQM--YEQQVVK-LSEAAALAGLQE 276
Query: 333 VKICLEKVLKAQEECEIYRQ-------SSLQCKYFLEEVLHVIGSALPLADKIFLDFGFD 385
++ + + + I+ ++LQ Y E HV + + A++ L FD
Sbjct: 277 QRVYALHLRRYNDALLIHDTVRAVDALAALQDFYHRE---HVTKTQILCAERRLLAL-FD 332
Query: 386 YSKAVDLGYIST------KLHELLQLFLS--FGKSTQVLCIIFVERIIAAK------VVE 431
K +L +++T KL E+L+ L F S IIF +A +
Sbjct: 333 DRKN-ELAHLATHGPENPKL-EMLEKILQRQFSSSNSPRGIIFTRTRQSAHSLLLWLQQQ 390
Query: 432 RFVKKVPFLTHLTVAYLTGSTTSVDALTPKVQKEVLESFRGGKVNLLFATDVIEEGMHVP 491
+ ++ V L + G+++ +T + Q+EV++ F+ G +NLL AT V EEG+ +P
Sbjct: 391 QGLQTVDIRAQLLIG--AGNSSQSTHMTQRDQQEVIQKFQDGTLNLLVATSVAEEGLDIP 448
Query: 492 NCSYVIRFDLPKTVSSYIQSRGRARQHNSQFILMLERSERSVTDTALSRDPEACFLKACT 551
+C+ V+R+ L S +Q+RGRAR S + + R + ++ E +A
Sbjct: 449 HCNVVVRYGLLTNEISMVQARGRARADQSVYAFVATEGSRELKRELINEALETLMEQAVA 508
Query: 552 YVK 554
V+
Sbjct: 509 AVQ 511
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 593,812,949
Number of Sequences: 539616
Number of extensions: 25931311
Number of successful extensions: 67073
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 213
Number of HSP's that attempted gapping in prelim test: 62889
Number of HSP's gapped (non-prelim): 3897
length of query: 1590
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1459
effective length of database: 120,879,763
effective search space: 176363574217
effective search space used: 176363574217
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)