Query 000385
Match_columns 1588
No_of_seqs 226 out of 373
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 06:43:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000385.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000385hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0916 1,3-beta-glucan syntha 100.0 0E+00 0E+00 3847.2 71.0 1339 1-1583 188-1679(1679)
2 PF02364 Glucan_synthase: 1,3- 100.0 2E-258 5E-263 2325.3 41.6 647 838-1513 1-713 (817)
3 PF14288 FKS1_dom1: 1,3-beta-g 100.0 5.9E-50 1.3E-54 398.8 8.3 116 122-240 1-117 (117)
4 KOG0916 1,3-beta-glucan syntha 100.0 6.2E-29 1.3E-33 310.9 10.1 346 268-654 426-792 (1679)
5 PF02364 Glucan_synthase: 1,3- 98.1 7.9E-07 1.7E-11 113.0 1.1 44 932-975 100-143 (817)
6 PRK11204 N-glycosyltransferase 88.7 1.7 3.7E-05 52.8 9.5 182 1026-1236 71-257 (420)
7 TIGR03111 glyc2_xrt_Gpos1 puta 88.3 4.2 9.1E-05 50.5 12.7 42 1088-1133 118-160 (439)
8 PRK14583 hmsR N-glycosyltransf 87.9 0.73 1.6E-05 57.0 5.7 183 1026-1234 92-276 (444)
9 PRK11498 bcsA cellulose syntha 78.5 1.1 2.4E-05 59.9 2.0 172 1087-1277 325-506 (852)
10 cd02520 Glucosylceramide_synth 68.3 12 0.00026 40.6 6.6 102 1087-1236 72-174 (196)
11 cd06421 CESA_CelA_like CESA_Ce 52.6 19 0.0004 39.4 4.7 138 1087-1236 70-208 (234)
12 TIGR03472 HpnI hopanoid biosyn 46.1 1.3E+02 0.0028 36.7 10.9 130 1088-1233 113-247 (373)
13 PRK05454 glucosyltransferase M 39.4 1.8E+02 0.004 39.0 11.3 139 1087-1234 204-351 (691)
14 TIGR03030 CelA cellulose synth 33.0 4.6E+02 0.01 35.3 13.6 135 1088-1236 215-355 (713)
15 COG1215 Glycosyltransferases, 29.5 30 0.00065 42.0 1.9 126 1084-1234 120-260 (439)
16 PRK14716 bacteriophage N4 adso 26.8 47 0.001 42.7 3.0 26 1210-1235 260-285 (504)
17 PF14518 Haem_oxygenas_2: Iron 24.5 30 0.00066 34.4 0.6 75 1085-1180 9-89 (106)
18 PHA03048 IMV membrane protein; 23.9 1.2E+02 0.0027 30.7 4.5 15 1274-1288 1-15 (93)
19 PF10569 Thiol-ester_cl: Alpha 20.6 36 0.00078 28.1 0.2 12 1254-1265 8-19 (31)
No 1
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=0 Score=3847.22 Aligned_cols=1339 Identities=56% Similarity=0.911 Sum_probs=1253.1
Q ss_pred CCchHHHHHHHHHHhcCCCCCCCCCCCCCCCCccccchhHHHHHHHhhhccccccccchHHHHHHHHhhccccCCCCccc
Q 000385 1 MELPEIKAALRALRNVQNLSMPSVTTNAPHDLPEERNKLDILDWLSSVFGFQKGNVANQREHLILLLANMDVRKRDLADY 80 (1588)
Q Consensus 1 m~~pEv~aA~~al~~~~~Lp~p~~~~~~~~~~~~~~~i~DIfd~L~~~FGFQkDNVrNQrEHLmlLLaNr~sR~~p~~a~ 80 (1588)
|++|||+||++|++++.|||+|+...| . ..|++| |+..||||+|||+|||||++++|+|.++|..|+++.
T Consensus 188 sr~pe~~A~~sa~~~~~glp~~~~kk~-~--------fad~lD-l~~~fGFq~~nv~nqReh~il~lan~~~r~~~~~~~ 257 (1679)
T KOG0916|consen 188 SRMPEVQALLSAHADYIGLPRANYKKW-Y--------FADQLD-LDDEFGFQNMNVANQREHLILKLANAQIRKRPKPEN 257 (1679)
T ss_pred hcCCHHHHHHHHHhhcCCCCCcCcCCC-c--------hhhhhh-hHHHhcccccchhhhhhhHHHhhcchhhhccCCccc
Confidence 689999999999999999999984434 2 349999 999999999999999999999999999999988776
Q ss_pred cc-cccCchhhhHhHhhhhHHHHhhhhcccCCCCCCCCCC-hhhhhHHHHHHHHHhhccccccccchhHHHHHHHhhHHH
Q 000385 81 TE-LRGSTVPKLMDKIFKNYWSWCNYLRCEQNTRTPPGSD-KQQIQLIYIGLYLLIWGEASNIRFMPECICYIFHKMAED 158 (1588)
Q Consensus 81 ~~-L~~~aI~~l~~k~~aNYkKWC~~Lg~~~~~~~p~~~~-~~~~~ll~IaLYLLIWGEAaNLRFMPECLCFIFH~MA~e 158 (1588)
.+ +++.+++ ++||.+||+||+.+++.|.|..+. +++++++|||||||||||||||||||||||||| |.|
T Consensus 258 ~~~~~~~~~~------~~ny~~wc~~L~~~~~~w~~~m~~~~~~~~ll~iaLYLLiWGEA~NvRFmPECLCyIf---a~e 328 (1679)
T KOG0916|consen 258 PDKLDETAVR------FKNYVEWCKYLGSASYLWKPKMNQLSPQRMLLQIALYLLIWGEANNVRFMPECLCFIF---ACE 328 (1679)
T ss_pred ccccchhhhc------hhcccccchhhhhhhhhchhhhhhccHHHHHHHHHHHHHhhhhhhcccccHHHHHHHH---HHH
Confidence 55 8887775 999999999999999999997755 889999999999999999999999999999999 557
Q ss_pred HHhhhcCCCCCCcCcccCCCCCCCCCch-hhhhhccchHHHHHHHHHhhhcCCCCCCCcccccCcCcccccccccccccc
Q 000385 159 VYGILFGNVRPVTGDTYHGSQTAAPDEE-TFLRTVITPIYQVLRKEAKRNNGGKASHSRWRNYDDLNEYFWSSKCLSLKW 237 (1588)
Q Consensus 159 l~~~L~~~~s~~t~~~~~~~~~~~~~e~-sFL~~VITPIY~~i~~e~~~~~~GkadHs~~rNYDDiNEyFWs~~Cf~L~w 237 (1588)
+++++.++.++.|+ +. +++ +||++||||||++|++|++++++|++|||+||||||+||||||++|| ++|
T Consensus 329 l~~il~~~~~~~t~--------~~-P~~~~FL~~VITPiY~~i~~e~~k~~~ge~~Hs~wrnYDDiNeyFWs~~~f-l~w 398 (1679)
T KOG0916|consen 329 LDYILSGEVSEVTG--------PL-PEYSAFLDNVITPIYEFIRAEAYKSVRGEKDHSQWRNYDDINEYFWSPEGF-LGW 398 (1679)
T ss_pred HHHhhhhccccccC--------CC-cchhhHHHhhhHHHHHHHHHHHHHhccCCCCchhhcCcchHHHHhcCHHHH-hcC
Confidence 88899999988875 12 344 99999999999999999999999999999999999999999999999 999
Q ss_pred cCCCCCCccccCCCCCCCCCCCCCCCCCCCCCccceeeeeehhhhhhchhHHHHHHHHHHHHHHHHhcCCCCCCCcccCh
Q 000385 238 PTGLKEEFSVHSDVVSPAHETPNRVPAGKSKPKTNFVEARTFWHLYRSFDRMWIFFIMAFQAMVIVAWTPDGSPAALFDE 317 (1588)
Q Consensus 238 p~~~~~~ff~~p~~~~~~~~~~~~~~~~~~~gKktFvE~RSw~Hl~~sF~RiWif~il~fq~mii~Afn~~~~~~~~~~~ 317 (1588)
||+++++||++|.++ + +|+|+++||+
T Consensus 399 p~~~~~~ff~~p~~~-----------~--------------------------------~qal~iVaW~----------- 424 (1679)
T KOG0916|consen 399 PLRDGTDFFDLPAEE-----------R--------------------------------YQALIIVAWN----------- 424 (1679)
T ss_pred cccCCCcceeCCHHH-----------H--------------------------------HHHHHHHHHH-----------
Confidence 999999999998441 1 9999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccceecchhhhHHHHHHHHHHHHHHHhhhceeEEeecccCCcccccccCccc
Q 000385 318 DVFRSVLTIFITQAFLNLLQAALDIVLSFNAWWSLKITQILRYLLKFAVAAAWAVILPICYASSVQNPTGVVKFFSNLTE 397 (1588)
Q Consensus 318 ~~~~~~~Si~it~a~l~~lq~iLdi~~~~~~~~~~~~~~~~R~il~~~~~~~~~~v~p~~Y~~~~~~~~~~~~~~~~~~~ 397 (1588)
+++++++++++|+ +.++|+ ++.+|++.+|++|.+++.+
T Consensus 425 dvf~k~l~~f~Tw--l~l~q~---------------------------fa~iWvi~~~v~y~~s~~n------------- 462 (1679)
T KOG0916|consen 425 DVFYKVLSEFRTW--LHLLQN---------------------------FARIWVIHFSVFYYYSVYN------------- 462 (1679)
T ss_pred HHHHHHHHHHHHH--HHHHHH---------------------------HHHHHHHHHHHHHHHHHhc-------------
Confidence 5899999999999 888886 5688999999999887753
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhcccchhccccCCccccccccccCCceeeccccccchhhhHhHHHHHHHHHH
Q 000385 398 NWQNQGSLYNYAVAIYLIPNILAALLFFLPQLRRIMERSNSHVVTPFMWWAQPKLYVGRGLHEGMFQLLKYTLFWIMLLI 477 (1588)
Q Consensus 398 ~~~~~~~~y~~~v~~y~~p~~~~~~l~~~P~~~~~~~~s~~~~~~~~~w~~q~r~yVGrgm~e~~~~~~~Y~~FWi~vl~ 477 (1588)
+ ++.|+.++.+|+.|+.++++++.+|++|+.++++++.++.+++||+|||.|+|
T Consensus 463 ---s-pt~y~~~~~~yl~p~~la~~~~~~p~~~~~v~~~~~~~~~~~~W~~~pr~~~G---------------------- 516 (1679)
T KOG0916|consen 463 ---S-PTLYTKNVHIYLGPQPLAAVLWAVPALRGTVESLIMLIATLFEWWFVPRKFPG---------------------- 516 (1679)
T ss_pred ---C-ceeEEEeeeeecCCcHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccccCCC----------------------
Confidence 2 78899999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhccccchhHHhhhcccCcccccccCcCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 000385 478 CKLAFSYYVEILPLVGPSKLIMKLHVDNYEWHEFFPNVTHNIGVVIAIWAPIVLVYFMDTQIWYSIFSTLFGGIHGALSH 557 (1588)
Q Consensus 478 ~Kf~fSYfflI~pLv~Ptr~I~~~~~~~y~w~~f~~~~~~n~~~l~~lW~PvllvyFlDTqIWY~I~stifG~~~G~~~~ 557 (1588)
| |+|+|+.+.|+++++++|+|+++||+|||||||+|+|+++|+++|+++|
T Consensus 517 ----------------p--------------h~~~~r~~~n~~~v~~~w~Pvv~Vy~mdtqiwy~i~s~lvggivg~f~~ 566 (1679)
T KOG0916|consen 517 ----------------P--------------HEFFPRFKNNIGVVIANWAPVVLVYFMDTQIWYAIFSTLVGGIVGFFFH 566 (1679)
T ss_pred ----------------c--------------hhhhHHHHHHHHHHHHHHhhHhheeehhhHHHHHHHHHHHHHHHHHHHH
Confidence 1 8899988999999999999999999999999999999999999999999
Q ss_pred cccccchHhHHHHHhhhHHHHHhccCCCCccccccc------ccchhhhcccccchhhhhHHHHhhcccccCCCcccccc
Q 000385 558 LGEIRTLGMLRSRFESVPTAFCRRLVPPSDAAKKDR------HMDESVHRRNIANFSHVWNEFIESMREEDLISNDDRDL 631 (1588)
Q Consensus 558 LGEIr~l~~lR~~F~~lP~af~~kLv~~~~~~~~~~------~~~~~~~~~~~~~Fs~vWNeII~SmReEDLISdrE~~l 631 (1588)
|||||+++ |+.+|++|+.++.|.++. ++.. ++.++.+.+++.+|+++||+||.|+|+||+|||+|+++
T Consensus 567 lgeir~~~-----f~~lp~af~~~l~~~~~~-r~~~~~~~ft~~~~~~~~~~a~~f~~lWn~vi~a~r~Edyis~~e~~l 640 (1679)
T KOG0916|consen 567 LGEIRTLS-----FQPLPGAFNAYLKPKESK-RKYLANKTFTAKFAPLNGKEAARFALLWNTVILAKREEDYISLRELRL 640 (1679)
T ss_pred hheeEeee-----eeEchHhHhhhcCCCchh-hhhhhhhcccccCCCcchHHHHHHHHHHHHHHHHhhhHHhhhccchhh
Confidence 99999999 999999999999998742 2211 23456788899999999999999999999999999999
Q ss_pred ccccCCCCCccccccChhhhcCchHHHHhHHHhhcccchHHHHHHhhhchhHHHHHHHHHHHHHHHHHhhcccc-chhHH
Q 000385 632 LLVPYSSEDVSVVQWPPFLLASKIPIALDMAKDFKEKEDADLFRKIKNDEYMLSAVVECYETLREIIYGLLEDE-IDRSI 710 (1588)
Q Consensus 632 L~~p~~~~~~~~i~wP~FLla~ki~~Ald~a~~~~~~~~~~L~~~i~~d~y~~~Av~e~y~~~~~lL~~lv~~~-~~~~~ 710 (1588)
|++|++..+...+. +||||+ ++|++||++..++.+.+++.+++.|+||.|||+|||+|++++++.++..+ .++.|
T Consensus 641 ~i~~l~~~~~~~~~--~flL~s--~la~~qaK~~~g~~~~~l~~~~~~DtYm~yaV~e~y~Sik~~~~~~i~~~T~~r~i 716 (1679)
T KOG0916|consen 641 LIRPLSTMSSYDCT--IFLLGS--PLALDQAKILLGKMYLTLLILFFLDTYLWYAVVETYFSIKKSFYLGISILTPWRNI 716 (1679)
T ss_pred hhcccccCCcccch--hHHhcc--HHHHHHHHHhcCchHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhcCchHHHH
Confidence 99997766554444 999999 99999999999977779999999999999999999999999999999887 57889
Q ss_pred HHHHHHHHHHhhhcccccccccccCchhhHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHHHHHHHHhhhchhhHHhh
Q 000385 711 VRQICYDVDINIHQHQFLNEFRMSGMPSLSEKLEKFLKLLLSEYESAEVYKSQIINVLQDIMEIILQDIMVNGYKILERY 790 (1588)
Q Consensus 711 v~~i~~~v~~~i~~~~~~~~f~~~~lp~~~~~~~~L~~~L~~~~~~~~~~~~~vv~~l~~l~e~~~~d~~~~~~~~~~~~ 790 (1588)
+++++++|+.+|.+..+..+|+++.||.++.+++.|+ +. +. -++++|+++|+++||++.++.+ +..
T Consensus 717 ~~ri~~rI~~~I~~~~~~~~fk~~vL~~~~~~~i~i~---my--------~e-~l~~lq~l~ell~~qv~~e~~~--~~~ 782 (1679)
T KOG0916|consen 717 FSRLPKRIYSKILATDLEIEFKPKVLPSQIWNAIKIS---MY--------RE-HLLALQHLQELLYHQVPSEGGG--QTL 782 (1679)
T ss_pred HHHHHHHHHHHHHHhhHHHHhChhhhHHHHhhhhhee---hh--------HH-HHHHHHHHHHHHHHHhhhhccc--chh
Confidence 9999999999999999999999999999999999988 11 11 1899999999999999998754 111
Q ss_pred hcccccccccccccccccccccCChhHHHHHHHHHHHHhhhccccccccCCCChhhhHhhhhhccccCCCCCCCcccccc
Q 000385 791 HMQIQTNDKKEQRFERLNITLTQNKSWREKVLLVVRLYLLLTVKESAINVPTNLDARRRITFFANSLFMNMPSAPKVRDM 870 (1588)
Q Consensus 791 ~~~~~~~~~~~~~F~~i~~p~~~~~~~~~~~~~v~Rl~~lLt~k~~a~~~P~n~EArRRisFFanSLfm~mP~a~~V~~M 870 (1588)
.+ |++|.+ ++|..| |+++++|+|+||||||+||||||||+||+||||++|
T Consensus 783 -----~~---~~ff~~-----~~d~~~-----------------~s~~~~P~n~EA~RRisFFa~SL~m~mP~a~~V~~M 832 (1679)
T KOG0916|consen 783 -----KA---PTFFVS-----QDDGSF-----------------ESAEFVPSNLEARRRISFFANSLFMPMPEAPPVRNM 832 (1679)
T ss_pred -----hc---chhhee-----cccccc-----------------cchhhCCccHHHHHHHHHHHHhhccCCCCCCccccc
Confidence 11 788886 455544 456899999999999999999999999999999999
Q ss_pred ccceeeccccccccccchhhhhcccCCcccHHHHHHhhCChhhhhHHhhhCC--Cc---CCCCCCchhhhhhhccccccc
Q 000385 871 ISFSVLTPYFKEDVLYSIDELNQENEDGITTLFYLQKIYPDEWTNFQKRIND--PK---LNYSEDDKNEATRRWVSYRAQ 945 (1588)
Q Consensus 871 ~SFSVLTPyY~E~VlyS~~eL~~enedgvsiL~YLq~i~PdEW~NFleR~k~--e~---~~~~~~~~~lelRlWAS~RgQ 945 (1588)
||||||||||+||||||++||++||||||||||||||||||||+|||||+|. ++ |+...|++++|||+|||||||
T Consensus 833 ~sFsVLtP~YsE~vl~S~~el~~e~ed~vsiL~YLqki~pdEW~nFler~k~~~~e~~~dl~~~pe~~l~lR~WaS~RgQ 912 (1679)
T KOG0916|consen 833 PSFSVLTPYYSEKVLYSLRELIRENEDGVSILFYLQKIYPDEWKNFLERTKCLAEEKIDDLPFYPEYTLRLRIWASYRGQ 912 (1679)
T ss_pred CceeeecccchhhhhhhHHHHhhcccCCeeHHHHHHHhCcHHHHHHHHHhccchhccccccccchhHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999983 22 444457899999999999999
Q ss_pred cccccccccccHHHHHHHHhhhhcCCCcccccccccccCCchhHHHHHHHHhcCCccEEEEeeccccCCCCchhhhhhch
Q 000385 946 TLSRTVRGMMYYKQALELQCFLESAGDNAFFGSYQAMESSQGDERASAKALADMKFTYVVSCQLYGAQKKSDDLRDRSCY 1025 (1588)
Q Consensus 946 TL~RTVrGmMyY~~Alkll~~lE~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~KFtyVVs~Q~y~~~~~~~~~~~~a~~ 1025 (1588)
||||||||||||+|||||||++|++++.++.+|.++. ...+++++++||++|||||||||+||.||+++|++ |
T Consensus 913 TL~RTvrGmMyY~rAlkL~~~~e~~~~~~~~~G~~~~---~~~l~~~l~~~A~~KFtyvVscQ~Y~~~K~~~d~~--a-- 985 (1679)
T KOG0916|consen 913 TLYRTVRGMMYYSRALKLLYFLENPEEVDLFEGDSNE---DRSLEAELEAMADRKFTYVVSCQRYGNQKFSGDER--A-- 985 (1679)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcchhhHHhcCCchh---hhHHHHHHHHHHhccceEEEehhHhhhhccCCChH--H--
Confidence 9999999999999999999999999999999984332 12599999999999999999999999999999999 8
Q ss_pred hHHHHHHHhCCCcEEEEeecccccccccccceEEEEEEecC-----CCcccceEEeecCCCCCcCCCCCCccccchhhhc
Q 000385 1026 NNILNLMIKYPSLRVAYIDEREETVNEKSQKFHYSVLLKGG-----DKYDEEIYRIKLPGPPTDIGEGKPENQNHAIIFT 1100 (1588)
Q Consensus 1026 ~~i~~L~~~~p~LrVAYide~~~~~~g~~~~~yyS~Lvk~~-----~g~~~~~yrikLpG~~pilGeGKpeNQNhAiiF~ 1100 (1588)
+||++||++||+||||||||++++.+++ +++|||+||||+ +|+|+||||||||| |||||||||||||||||||
T Consensus 986 e~i~~Lm~~yp~LriAYide~e~~~~~~-~~~~YS~Lvk~~~~~~~~~~~~~iyrIkLpG-~pilGeGKpeNQNhaiiFt 1063 (1679)
T KOG0916|consen 986 ENILFLMRAYPSLRIAYIDEVEPPVEEG-EPVYYSVLVKGDCEIDENGLDQEIYRIKLPG-PPILGEGKPENQNHAIIFT 1063 (1679)
T ss_pred HHHHHHHHhCccceEeeeccccccccCC-CceEEEEeeecCcchhhcccccceEEEeCCC-CCcCCCCCCcccCceeeee
Confidence 9999999999999999999977655444 779999999999 46999999999999 9999999999999999999
Q ss_pred cccccccccCCccchHHHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhhccccccchhhHHHHHHhhhccccc
Q 000385 1101 RGEALQTIDMNQDNYFEEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSLAWFMSNQETSFVTISQRILAYPLR 1180 (1588)
Q Consensus 1101 RGe~lQtIDmNQDnYlEE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~La~~~a~qE~sF~Tl~qR~la~Pl~ 1180 (1588)
||||||||||||||||||||||||||+||++.+.|.|||||||+|||||||||||||||||||||||||||||+||+|+|
T Consensus 1064 RGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms~qEqSFvTlgqR~LA~p~~ 1143 (1679)
T KOG0916|consen 1064 RGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMSGQEQSFVTLGQRTLANPGG 1143 (1679)
T ss_pred cchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHccCccchhhHHHHHhccccc
Confidence 99999999999999999999999999999999989999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeeeeeccccccccccccccceeccCCCcc
Q 000385 1181 VRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYIQVGKGRDVGMNQISSFEAKVANGNGE 1260 (1588)
Q Consensus 1181 ~r~HYGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~q~GKGRDvG~~qI~~Fe~Ki~~G~gE 1260 (1588)
|||||||||||||+||+||||||||||||||||||||||||||||||||||||||||||||||||||++||||||+||||
T Consensus 1144 vr~HYGHPD~~drif~~TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EYiQvGKGRDvGlnqI~~FeaKia~G~GE 1223 (1679)
T KOG0916|consen 1144 VRLHYGHPDVFDRIFHITRGGVSKASKGINLSEDIFAGFNATLRGGNITHHEYIQVGKGRDVGLNQISNFEAKIANGNGE 1223 (1679)
T ss_pred eeeecCCCcHhhhhhhhccccchHhhcccccchHhhhhhhHHhhCCCcccceeeecccccccCcchhhhhhhhhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHhhccccchhhhhhhhcccccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCcccCCchHHhhhhhHHH
Q 000385 1261 QTLSRDVYRLGRRFDFFRMLSFYFTTVGFYLSSMITVLTVYVFLYGRLYMVMSGLEREILENPSIHQSKALEQALATQSV 1340 (1588)
Q Consensus 1261 Q~lSRd~yrLg~~ldf~R~lSfyy~~~Gf~~n~~~~~ltv~~f~~~~~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~i 1340 (1588)
|+||||||||||||||||||||||||||||+|||+||+|||+||||++|+++||+|+.+...+...++.+|+++|+||||
T Consensus 1224 Q~LSRd~YrLG~~ldffRmLSfyftt~GF~~n~m~ivltVy~Fl~GrlYl~lsg~~~~~~~~~~~~~~~~l~~aL~~qsi 1303 (1679)
T KOG0916|consen 1224 QTLSRDYYRLGTQLDFFRMLSFYFTTVGFYFNNMFIVLTVYLFLYGRLYLVLSGYEKDISLTASPRGCYALEPALAWQSI 1303 (1679)
T ss_pred hhhhHHHHHhcccccHHHHHHHHhccccHHHHhHHHHHHHHHHHHHhHHHHHhhhhhccccccCCCccchHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999998876777888999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccceeeeeeeceeEEEeeccccccCceeeecCCceeEeccchhhhh
Q 000385 1341 FQLGLLLVLPMVMEIGLEKGFRSALGDFIIMQLQLASVFFTFQLGTKVHYFGRTILHGGSKYRATGRGFVVFHEKFSENY 1420 (1588)
Q Consensus 1341 ~q~g~l~~lPl~~~~~~E~G~~~a~~~~~~~~~~l~~~F~~F~~~t~~~~~~~~i~~GgAkY~aTGRGF~~~~~~F~~~y 1420 (1588)
||+|+++++||+|++++||||++|+.||++||+||||+||||+||||+|||+|||+|||||||||||||||.|++|++||
T Consensus 1304 fqv~~~~~lPmv~e~~lErGf~~A~~~f~~mqlqLa~vF~tF~~gt~~hy~~rtllhGGAkYr~TGRGFvv~h~~FsenY 1383 (1679)
T KOG0916|consen 1304 FQVGFIMFLPMVMEIGLERGFLRALSRFIKMQLQLAPVFFTFSLGTYTHYFGRTLLHGGAKYRATGRGFVVFHAKFSENY 1383 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHheeeeccchhHhhhhHhhcCCeeeeccCcceEEEeccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcccccCcchhhHHHHHHHHHHHHHhccccccCCCCcccchhhhcHHHHHHHhccCC
Q 000385 1421 RLYSRSHFVKGLELVILLVLYQVYGHSYRSSNLYLFITISMWFLVGSWLFAPFVFNPSGFDWQKTVDDWTDWKRWMGNRG 1500 (1588)
Q Consensus 1421 ~~ya~sh~~~g~el~~lli~y~~~~~~~~~~~~y~~~t~s~W~~~~~~l~aPf~FNP~~f~w~~~~~D~~~w~~Wl~~~g 1500 (1588)
|+|||||||||+|+++||+||.+||+.++++..|++.|+|+||+++|||||||+||||||+|+|+|+||+||++||.+||
T Consensus 1384 rlysrshfvkg~el~lmLlvy~~fg~~~~~~~~y~~~~i~~Wf~v~swlfAPFlFNPsgF~W~~~v~D~~d~~rWl~~rG 1463 (1679)
T KOG0916|consen 1384 RLYSRSHFVKGSELMLLLLVYQIFGPAYRSSTVYILITISFWFLVGSWLFAPFLFNPSGFEWQKFVDDYRDWIRWLWSRG 1463 (1679)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHhhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CCCCCCCCccccc-------------------------------------------------------------------
Q 000385 1501 GIGIQPNRSWESW------------------------------------------------------------------- 1513 (1588)
Q Consensus 1501 ~~~~~~~~sW~~w------------------------------------------------------------------- 1513 (1588)
|++++.++||++|
T Consensus 1464 ~~~~~~~~SW~~ww~~e~~hl~~~~~~G~~~Ei~l~l~f~~f~~~~~~~ln~~~g~~~~~~v~~~s~~~i~~v~~~~~~~ 1543 (1679)
T KOG0916|consen 1464 GIGVHAEKSWESWWEEEQEHLTGSGRRGRFLEIILPLRFFFFQYGIVYFLNIQPGTNTSLRVYILSWAPIAAVLFLFKLL 1543 (1679)
T ss_pred CCCCCccccHHHHHHHHHHHHhccCccchhHHHHHHHHHHHhhheeeEEEeccCCCCceEeehhhHHHHHHHHHHHHHHH
Confidence 9999999999999
Q ss_pred ------------------------------------------------------------------hhhhhcccHHHHHH
Q 000385 1514 ------------------------------------------------------------------PLFKAIGFWESIKE 1527 (1588)
Q Consensus 1514 ------------------------------------------------------------------~~~~~~~~w~~~~~ 1527 (1588)
|+++.+|+|++++.
T Consensus 1544 ~~~~kk~g~~~~~~~r~i~~~~~~~~~~v~~~l~~~~~~~~~d~~~~~la~~~t~~~~l~i~~~~r~~~~~~~~W~~~~~ 1623 (1679)
T KOG0916|consen 1544 GMCRKKFGAVFALLARFIKVLVFLLFFEVMWVLEGWSFLTTVDLFVSILAFHPTGWGLLLIAQLTREVKKDLGWWSGVWY 1623 (1679)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 66688999999999
Q ss_pred HHHHHHHHhhHHhHHHHHHhhccCccchhhhhhcchhhcccchhhhhhhccCCCcc
Q 000385 1528 LARAYEYIMGLLLFAPIAILSWFPFVSEFQTRLLFNQAFSRGLQISMILAGRKDKT 1583 (1588)
Q Consensus 1528 ~a~~~~~~~g~~~~~p~~~ls~~p~~~~~qtr~lfn~~fsr~l~i~~~~~~~~~~~ 1583 (1588)
+||+||++||.+||+|+|+|+||||+|+|||||||||||||||||++||+|++++.
T Consensus 1624 ~~~ayd~~mg~li~~p~a~l~w~Pfi~~fqtr~LFn~afSR~l~i~~Il~gk~~~~ 1679 (1679)
T KOG0916|consen 1624 LARAYDFFMGHLIFFPVAPLSWFPFISEFQTRMLFNQAFSRGLRISRILAGKQKKL 1679 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccccCCcchhhccCccCC
Confidence 99999999999999999999999999999999999999999999999999999863
No 2
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=100.00 E-value=2.2e-258 Score=2325.28 Aligned_cols=647 Identities=56% Similarity=0.918 Sum_probs=604.3
Q ss_pred ccCCCChhhhHhhhhhccccCCCCCCCccccccccceeeccccccccccchhhhhcccC--CcccHHHHHHhhCChhhhh
Q 000385 838 INVPTNLDARRRITFFANSLFMNMPSAPKVRDMISFSVLTPYFKEDVLYSIDELNQENE--DGITTLFYLQKIYPDEWTN 915 (1588)
Q Consensus 838 ~~~P~n~EArRRisFFanSLfm~mP~a~~V~~M~SFSVLTPyY~E~VlyS~~eL~~ene--dgvsiL~YLq~i~PdEW~N 915 (1588)
+++|+|+||||||+||||||+||||+||||++|||||||||||+|||+||++||++||| ||||+|+|||+||||||+|
T Consensus 1 ~~~P~~~EA~RRisFFanSL~~~mP~~~~V~~M~sfsVLtP~Y~E~Vl~Sl~eL~ke~e~~~~vtlL~YLk~l~p~EW~n 80 (817)
T PF02364_consen 1 EFFPRNSEARRRISFFANSLFMPMPEPPPVEKMPSFSVLTPYYSEKVLYSLKELIKENEQNDGVTLLEYLKQLYPDEWEN 80 (817)
T ss_pred CCCCCchHHHHHHHHHHHhcCCCCcCCCchhhccccccccccccceeccCHHHhhhcccccCCccHHHHHHHHChHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HHhhhCC---CcC------------CC-----------------CCCchhhhhhhccccccccccccccccccHHHHHHH
Q 000385 916 FQKRIND---PKL------------NY-----------------SEDDKNEATRRWVSYRAQTLSRTVRGMMYYKQALEL 963 (1588)
Q Consensus 916 FleR~k~---e~~------------~~-----------------~~~~~~lelRlWAS~RgQTL~RTVrGmMyY~~Alkl 963 (1588)
|+||+|. |++ .| ..|++++|+|+|||+|||||||||+|||||+||||+
T Consensus 81 F~er~k~~~~e~~~~~~~~~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~QTLyRTV~G~m~y~~Alkl 160 (817)
T PF02364_consen 81 FVERTKRLAEESDAEESSEKEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQTLYRTVSGFMNYSKALKL 160 (817)
T ss_pred HHHHhcccchhhhhhccccchhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHHhhhhhhhhhhhHHHHHhh
Confidence 9999971 111 01 136789999999999999999999999999999999
Q ss_pred HhhhhcCCCcccccccccccCCchhHHHHHHHHhcCCccEEEEeeccccCCCCchhhhhhchhHHHHHHHhCCCcEEEEe
Q 000385 964 QCFLESAGDNAFFGSYQAMESSQGDERASAKALADMKFTYVVSCQLYGAQKKSDDLRDRSCYNNILNLMIKYPSLRVAYI 1043 (1588)
Q Consensus 964 l~~lE~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~KFtyVVs~Q~y~~~~~~~~~~~~a~~~~i~~L~~~~p~LrVAYi 1043 (1588)
|+++|+++..+..++ +.+.++++++++|++||+||||||+||+|| +++ | +||++||++||+||||||
T Consensus 161 l~~~e~~~~~~~~~~------~~~~~~~~~~~~a~~KF~yVVs~Q~yg~~~---~~~--a--~~i~~Lm~~~P~LrVAYi 227 (817)
T PF02364_consen 161 LYRVENPSIEQMFGG------NYESLERELEAMADRKFTYVVSCQRYGKFK---KEE--A--EDIEFLMRAYPSLRVAYI 227 (817)
T ss_pred HhhccCCchhhhccC------chHHHHHHHHHHHhcCCCEEEecchhcCCC---hHH--H--HHHHHHHHhCCceEEEEE
Confidence 999999998776554 246788899999999999999999999998 344 6 999999999999999999
Q ss_pred ecccccccccccceEEEEEEecC-----CCcccceEEeecCCCCCcCCCCCCccccchhhhccccccccccCCccchHHH
Q 000385 1044 DEREETVNEKSQKFHYSVLLKGG-----DKYDEEIYRIKLPGPPTDIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEE 1118 (1588)
Q Consensus 1044 de~~~~~~g~~~~~yyS~Lvk~~-----~g~~~~~yrikLpG~~pilGeGKpeNQNhAiiF~RGe~lQtIDmNQDnYlEE 1118 (1588)
||+++..+| .+++||||||||+ +|+++|+||||||| |||||||||||||||||||||||||||||||||||||
T Consensus 228 de~~~~~~~-~~~~yYS~Lv~~~~~~~~~g~~~~~yri~LpG-~pilGeGK~eNQNhaiiF~rGe~lQ~IDmNQDnYleE 305 (817)
T PF02364_consen 228 DEVPDRNGG-GEPEYYSVLVKGDCEIDENGKRQEIYRIKLPG-NPILGEGKPENQNHAIIFTRGEYLQTIDMNQDNYLEE 305 (817)
T ss_pred eeecccCCC-CCceEEEEEecCCccccccCcccceEEEECCC-CCcCCCCCccccceeEEEEccccccccccchhhhHHH
Confidence 998865443 5899999999998 58889999999999 9999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHhhcCCC-------------CCCCceEecccceeecccchhhccccccchhhHHHHHHhhhccccceeeec
Q 000385 1119 AFKMRNVLEEFLKSPS-------------GRREPTILGLREHIFTGSVSSLAWFMSNQETSFVTISQRILAYPLRVRFHY 1185 (1588)
Q Consensus 1119 ~lKmrnlL~Ef~~~~~-------------g~~~~~IlG~RE~IFt~~vs~La~~~a~qE~sF~Tl~qR~la~Pl~~r~HY 1185 (1588)
||||||||+||++.+. +.+||||||+||||||||||+||||||+||||||||+||+||+|+ |||||
T Consensus 306 ~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~-~rlHY 384 (817)
T PF02364_consen 306 ALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPL-VRLHY 384 (817)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcch-hhccC
Confidence 9999999999998762 368999999999999999999999999999999999999999999 99999
Q ss_pred cCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeeeeeccccccccccccccceeccCCCccccchh
Q 000385 1186 GHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYIQVGKGRDVGMNQISSFEAKVANGNGEQTLSR 1265 (1588)
Q Consensus 1186 GHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~q~GKGRDvG~~qI~~Fe~Ki~~G~gEQ~lSR 1265 (1588)
||||||||+||+||||||||||||||||||||||||+|||||||||||||||||||||||||++||||||+|||||+|||
T Consensus 385 GHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~ey~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSR 464 (817)
T PF02364_consen 385 GHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCEYIQCGKGRDVGFNSILNFETKIASGMGEQMLSR 464 (817)
T ss_pred CCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceeehhhhhcccccccCchhhhhhHhHhcCCccchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhccccchhhhhhhhcccccchhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhcCCcccCC---------chHHhh--
Q 000385 1266 DVYRLGRRFDFFRMLSFYFTTVGFYLSSMITVLTVYVFLYGRLYMVMSGLEREILENPSIHQS---------KALEQA-- 1334 (1588)
Q Consensus 1266 d~yrLg~~ldf~R~lSfyy~~~Gf~~n~~~~~ltv~~f~~~~~~l~l~~~~~~~~~~~~~~~~---------~~l~~~-- 1334 (1588)
|||||||||||||||||||||||||+|||+||+|||+|+| +|++|+|++.++. .|.++.+ .+|.++
T Consensus 465 e~yrLg~~ld~~R~LSfyy~~~Gf~~n~~~i~lsv~~f~~--~~~~L~~l~~~~~-~~~~~~~~~~~~~~g~~~l~p~~~ 541 (817)
T PF02364_consen 465 EYYRLGTRLDFFRFLSFYYAHPGFYINNMFIVLSVYLFLY--VYLNLSGLEHESI-ICAYDKNTDVLEPIGCYNLQPVLD 541 (817)
T ss_pred HHHHhhccCCHHHHHHHHhcCccHhHhhHHHHHHHHHHHH--HHHHHHHHHHHHH-hhhhhcCCCccCCcccccccHHHH
Confidence 9999999999999999999999999999999999999999 5566667776653 1222222 234444
Q ss_pred ---hhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccceeeeeeeceeEEEeeccccccCceeeecCCceeE
Q 000385 1335 ---LATQSVFQLGLLLVLPMVMEIGLEKGFRSALGDFIIMQLQLASVFFTFQLGTKVHYFGRTILHGGSKYRATGRGFVV 1411 (1588)
Q Consensus 1335 ---l~~~~i~q~g~l~~lPl~~~~~~E~G~~~a~~~~~~~~~~l~~~F~~F~~~t~~~~~~~~i~~GgAkY~aTGRGF~~ 1411 (1588)
+++||+||+|+++++||++|+++|+|+++|+.||++||+||||+||||+||||+||+++||+|||||||||||||||
T Consensus 542 ~~~~~~~si~q~g~l~~lPl~~q~~lE~G~~~A~~~~~~~~lslsp~F~vF~~qt~a~~~~~~l~~GGAkYiaTGRGF~i 621 (817)
T PF02364_consen 542 WIARNVQSIFQLGFLSFLPLIVQELLERGFWKALTRFFKHQLSLSPVFEVFSCQTYAHYFGRTLLHGGAKYIATGRGFVI 621 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcccchheeeeeehhhhhhhhhhhcCccEEEecCCceEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhcccccCcchhhHHHHHHHHHHHHHhccccccCCCCcccchhhhcHHH
Q 000385 1412 FHEKFSENYRLYSRSHFVKGLELVILLVLYQVYGHSYRSSNLYLFITISMWFLVGSWLFAPFVFNPSGFDWQKTVDDWTD 1491 (1588)
Q Consensus 1412 ~~~~F~~~y~~ya~sh~~~g~el~~lli~y~~~~~~~~~~~~y~~~t~s~W~~~~~~l~aPf~FNP~~f~w~~~~~D~~~ 1491 (1588)
+|++|++||++||+||||+|+|+++||++|.++ +|...||++|++++|||+||||||||||+|+|+++||+|
T Consensus 622 ~r~~F~~lY~~YA~Sh~y~G~el~llLl~~~~~--------~y~~~~~~~W~~v~sll~aPFiFNP~~F~w~~~~~Dy~d 693 (817)
T PF02364_consen 622 TRIPFAELYSRYARSHFYKGFELLLLLLFYTLT--------MYIPATLSFWFLVISLLFAPFIFNPHQFDWQKFFVDYRD 693 (817)
T ss_pred EeccHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhcCcccCchhHHHHhHHH
Confidence 999999999999999999999999999877776 799999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCCCccccc
Q 000385 1492 WKRWMGNRGGIGIQPNRSWESW 1513 (1588)
Q Consensus 1492 w~~Wl~~~g~~~~~~~~sW~~w 1513 (1588)
|++||++ |++.++++||++|
T Consensus 694 w~~Wl~~--g~~~~~~~SW~~w 713 (817)
T PF02364_consen 694 WLRWLSR--GNSRPHDNSWISW 713 (817)
T ss_pred HHHHHhc--CCCCccccccHHH
Confidence 9999993 5899999999999
No 3
>PF14288 FKS1_dom1: 1,3-beta-glucan synthase subunit FKS1, domain-1
Probab=100.00 E-value=5.9e-50 Score=398.75 Aligned_cols=116 Identities=53% Similarity=1.012 Sum_probs=103.6
Q ss_pred hhhHHHHHHHHHhhccccccccchhHHHHHHHhhHHHHHhhhcCCCCCCcCcccCCCCCCCCCchhhhhhccchHHHHHH
Q 000385 122 QIQLIYIGLYLLIWGEASNIRFMPECICYIFHKMAEDVYGILFGNVRPVTGDTYHGSQTAAPDEETFLRTVITPIYQVLR 201 (1588)
Q Consensus 122 ~~~ll~IaLYLLIWGEAaNLRFMPECLCFIFH~MA~el~~~L~~~~s~~t~~~~~~~~~~~~~e~sFL~~VITPIY~~i~ 201 (1588)
|++++|+|||||||||||||||||||||||||+||.+++.++++..++.+++.... +..++++||++||||||++++
T Consensus 1 q~~l~~iaLYLLiWGEAaNlRfmPECLCfIFh~ma~~~~~~~~~~~~~~~~~~~~~---~~~~~~~FL~~VItPiY~~i~ 77 (117)
T PF14288_consen 1 QDMLLQIALYLLIWGEAANLRFMPECLCFIFHHMAMDYYRSLESQGSENTGEPVPP---PSVPEGSFLDHVITPIYEFIR 77 (117)
T ss_pred ChHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhhhhccccccccCCCCC---CCCCchHHHHhhhHHHHHHHH
Confidence 57999999999999999999999999999999999999999887766555443211 122788999999999999999
Q ss_pred HHHhhhcCCCCCCCcccccCcCccccccccccc-ccccCC
Q 000385 202 KEAKRNNGGKASHSRWRNYDDLNEYFWSSKCLS-LKWPTG 240 (1588)
Q Consensus 202 ~e~~~~~~GkadHs~~rNYDDiNEyFWs~~Cf~-L~wp~~ 240 (1588)
+|++++++|++||++|||||||||||||++||+ |+||++
T Consensus 78 ~q~~~~~~~~~dH~~~~nYDDiNE~FW~~~cl~~l~~~~~ 117 (117)
T PF14288_consen 78 DQQYSSVRGEADHSDWRNYDDINEYFWSPECLKRLKWPDK 117 (117)
T ss_pred HHhHhhcCCCCCccccCCCCccHHhhcCHhhHhHhccCCC
Confidence 999999999999999999999999999999996 999974
No 4
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=99.95 E-value=6.2e-29 Score=310.92 Aligned_cols=346 Identities=15% Similarity=0.213 Sum_probs=267.9
Q ss_pred CCccceeeeeehhhhhhchhHHHHHHHHHHHHHHHHhcCCCCCC----CcccChhh--HHHHHHHHHHHHHHHHHHHHHH
Q 000385 268 KPKTNFVEARTFWHLYRSFDRMWIFFIMAFQAMVIVAWTPDGSP----AALFDEDV--FRSVLTIFITQAFLNLLQAALD 341 (1588)
Q Consensus 268 ~gKktFvE~RSw~Hl~~sF~RiWif~il~fq~mii~Afn~~~~~----~~~~~~~~--~~~~~Si~it~a~l~~lq~iLd 341 (1588)
+.+|+|.|.|||+|++.||+|||++|+.++|+ ++++|+++.| .+.+++.+ ...+.+.+++.++.++++.+ .
T Consensus 426 vf~k~l~~f~Twl~l~q~fa~iWvi~~~v~y~--~s~~nspt~y~~~~~~yl~p~~la~~~~~~p~~~~~v~~~~~~~-~ 502 (1679)
T KOG0916|consen 426 VFYKVLSEFRTWLHLLQNFARIWVIHFSVFYY--YSVYNSPTLYTKNVHIYLGPQPLAAVLWAVPALRGTVESLIMLI-A 502 (1679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCceeEEEeeeeecCCcHHHHHHHHHHHHHhHHHHHHHHH-H
Confidence 44578999999999999999999999999998 6999999865 44445443 56678888899999998754 7
Q ss_pred HHhhccceec-chhhh--HHHHHHHHHHHHHHHhhhceeEEeecccCCcccccccCccccccccchhhHHHHHHHHHHHH
Q 000385 342 IVLSFNAWWS-LKITQ--ILRYLLKFAVAAAWAVILPICYASSVQNPTGVVKFFSNLTENWQNQGSLYNYAVAIYLIPNI 418 (1588)
Q Consensus 342 i~~~~~~~~~-~~~~~--~~R~il~~~~~~~~~~v~p~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~v~~y~~p~~ 418 (1588)
.+++|-++++ +.+++ ..|....++ ++.++.+|+++|+..... .++...+.++.+++.+.....
T Consensus 503 ~~~~W~~~pr~~~Gph~~~~r~~~n~~--~v~~~w~Pvv~Vy~mdtq------------iwy~i~s~lvggivg~f~~lg 568 (1679)
T KOG0916|consen 503 TLFEWWFVPRKFPGPHEFFPRFKNNIG--VVIANWAPVVLVYFMDTQ------------IWYAIFSTLVGGIVGFFFHLG 568 (1679)
T ss_pred HHHhhhcccccCCCchhhhHHHHHHHH--HHHHHHhhHhheeehhhH------------HHHHHHHHHHHHHHHHHHHhh
Confidence 8889988887 44443 556655444 455788999999877422 122213345555555555555
Q ss_pred HHHHHHHhcccchhccccCCccccccccccCCceeeccccccchh------hhHhHHHHHHHHHHHHhhhhhhhhhcccc
Q 000385 419 LAALLFFLPQLRRIMERSNSHVVTPFMWWAQPKLYVGRGLHEGMF------QLLKYTLFWIMLLICKLAFSYYVEILPLV 492 (1588)
Q Consensus 419 ~~~~l~~~P~~~~~~~~s~~~~~~~~~w~~q~r~yVGrgm~e~~~------~~~~Y~~FWi~vl~~Kf~fSYfflI~pLv 492 (1588)
....+.+.|+-..+..+ ++--..+|.|++++.+++.+ +......+|..|+.||+.|||++.. ++.
T Consensus 569 eir~~~f~~lp~af~~~--------l~~~~~~r~~~~~~~ft~~~~~~~~~~a~~f~~lWn~vi~a~r~Edyis~~-e~~ 639 (1679)
T KOG0916|consen 569 EIRTLSFQPLPGAFNAY--------LKPKESKRKYLANKTFTAKFAPLNGKEAARFALLWNTVILAKREEDYISLR-ELR 639 (1679)
T ss_pred eeEeeeeeEchHhHhhh--------cCCCchhhhhhhhhcccccCCCcchHHHHHHHHHHHHHHHHhhhHHhhhcc-chh
Confidence 55555555653333222 11123567888888777544 5566679999999999999999999 999
Q ss_pred chhHHhhhcc---cCcccccccCcCCCcchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccchHhHHH
Q 000385 493 GPSKLIMKLH---VDNYEWHEFFPNVTHNIGVVIAIWAPIVLVYFMDTQIWYSIFSTLFGGIHGALSHLGEIRTLGMLRS 569 (1588)
Q Consensus 493 ~Ptr~I~~~~---~~~y~w~~f~~~~~~n~~~l~~lW~PvllvyFlDTqIWY~I~stifG~~~G~~~~LGEIr~l~~lR~ 569 (1588)
+|++.+..++ +..|.|+..+|. .+++..+..+.+.++.++|+|||+||+|.+|++++-..+ .+| |+++|+||+
T Consensus 640 l~i~~l~~~~~~~~~~flL~s~la~-~qaK~~~g~~~~~l~~~~~~DtYm~yaV~e~y~Sik~~~--~~~-i~~~T~~r~ 715 (1679)
T KOG0916|consen 640 LLIRPLSTMSSYDCTIFLLGSPLAL-DQAKILLGKMYLTLLILFFLDTYLWYAVVETYFSIKKSF--YLG-ISILTPWRN 715 (1679)
T ss_pred hhhcccccCCcccchhHHhccHHHH-HHHHHhcCchHHHHHHHHHHhhhHHHHHHHHHHHHHHHH--HHh-hhcCchHHH
Confidence 9999976654 456788888885 788999999999999999999999999999999998877 889 999999999
Q ss_pred HHhhhHHHHHhccCCCCcccccccccchhhhcccccchhhhhHHHHhhcccccCCCccccccccc---cCCCCCcccccc
Q 000385 570 RFESVPTAFCRRLVPPSDAAKKDRHMDESVHRRNIANFSHVWNEFIESMREEDLISNDDRDLLLV---PYSSEDVSVVQW 646 (1588)
Q Consensus 570 ~F~~lP~af~~kLv~~~~~~~~~~~~~~~~~~~~~~~Fs~vWNeII~SmReEDLISdrE~~lL~~---p~~~~~~~~i~w 646 (1588)
+|+++|+++++||..+ ++ +.+.+++.+.+|+||.|++||+||||++..++.-|+. |....+ +..+-
T Consensus 716 i~~ri~~rI~~~I~~~-~~---------~~~fk~~vL~~~~~~~i~i~my~e~l~~lq~l~ell~~qv~~e~~~-~~~~~ 784 (1679)
T KOG0916|consen 716 IFSRLPKRIYSKILAT-DL---------EIEFKPKVLPSQIWNAIKISMYREHLLALQHLQELLYHQVPSEGGG-QTLKA 784 (1679)
T ss_pred HHHHHHHHHHHHHHHh-hH---------HHHhChhhhHHHHhhhhheehhHHHHHHHHHHHHHHHHHhhhhccc-chhhc
Confidence 9999999999999988 44 5788999999999999999999999999999888763 433333 55666
Q ss_pred ChhhhcCc
Q 000385 647 PPFLLASK 654 (1588)
Q Consensus 647 P~FLla~k 654 (1588)
|.|..+-+
T Consensus 785 ~~ff~~~~ 792 (1679)
T KOG0916|consen 785 PTFFVSQD 792 (1679)
T ss_pred chhheecc
Confidence 77776655
No 5
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=98.10 E-value=7.9e-07 Score=113.05 Aligned_cols=44 Identities=48% Similarity=0.695 Sum_probs=40.2
Q ss_pred hhhhhhhccccccccccccccccccHHHHHHHHhhhhcCCCccc
Q 000385 932 KNEATRRWVSYRAQTLSRTVRGMMYYKQALELQCFLESAGDNAF 975 (1588)
Q Consensus 932 ~~lelRlWAS~RgQTL~RTVrGmMyY~~Alkll~~lE~~~~~~~ 975 (1588)
...++|.|||||||||+|||||||||++|++|+++++.....+.
T Consensus 100 ~~~~~~~was~r~qtL~rtv~Gfm~~~~a~~LrtrLWASlR~QT 143 (817)
T PF02364_consen 100 KEEELRLWASYRGQTLPRTVRGFMYYEPAYTLRTRLWASLRGQT 143 (817)
T ss_pred chhhhhHHHHhcccCCCchhhhhhhhhHHHHHHhhhhhccHHHh
Confidence 46789999999999999999999999999999999999876543
No 6
>PRK11204 N-glycosyltransferase; Provisional
Probab=88.70 E-value=1.7 Score=52.84 Aligned_cols=182 Identities=20% Similarity=0.221 Sum_probs=95.0
Q ss_pred hHHHHHH-HhCCCcEEEEeecccccccccccceEEEEEEecCCCcccceEEeecCCCCCcCCCCCCccccchhhhccccc
Q 000385 1026 NNILNLM-IKYPSLRVAYIDEREETVNEKSQKFHYSVLLKGGDKYDEEIYRIKLPGPPTDIGEGKPENQNHAIIFTRGEA 1104 (1588)
Q Consensus 1026 ~~i~~L~-~~~p~LrVAYide~~~~~~g~~~~~yyS~Lvk~~~g~~~~~yrikLpG~~pilGeGKpeNQNhAiiF~RGe~ 1104 (1588)
+-++.++ +.||+.+|--||.-.+ |+..+ +++.-..+...+--++.+. | .||+.|-|+|+-..+||+
T Consensus 71 ~~l~sl~~q~yp~~eiiVvdD~s~--d~t~~------~l~~~~~~~~~v~~i~~~~-n----~Gka~aln~g~~~a~~d~ 137 (420)
T PRK11204 71 ETISHLLALRYPNYEVIAINDGSS--DNTGE------ILDRLAAQIPRLRVIHLAE-N----QGKANALNTGAAAARSEY 137 (420)
T ss_pred HHHHHHHhCCCCCeEEEEEECCCC--ccHHH------HHHHHHHhCCcEEEEEcCC-C----CCHHHHHHHHHHHcCCCE
Confidence 3455555 4699999988876432 11100 0000000111233344455 3 489999999999999999
Q ss_pred cccccCCccchH-HHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhhccccccchhhHHHHHH---hhhccccc
Q 000385 1105 LQTIDMNQDNYF-EEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSLAWFMSNQETSFVTISQ---RILAYPLR 1180 (1588)
Q Consensus 1105 lQtIDmNQDnYl-EE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~La~~~a~qE~sF~Tl~q---R~la~Pl~ 1180 (1588)
+=++|++ +.+ .++| ..+++.|++++ .+.+++..-.+-. ..+.++....+.-.+...+.+ +.+..+
T Consensus 138 i~~lDaD--~~~~~d~L--~~l~~~~~~~~----~v~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 206 (420)
T PRK11204 138 LVCIDGD--ALLDPDAA--AYMVEHFLHNP----RVGAVTGNPRIRN-RSTLLGRIQVGEFSSIIGLIKRAQRVYGRV-- 206 (420)
T ss_pred EEEECCC--CCCChhHH--HHHHHHHHhCC----CeEEEECCceecc-chhHHHHHHHHHHHHhhhHHHHHHHHhCCc--
Confidence 9998765 444 3333 35666776543 3445543322222 122333332222222222222 222111
Q ss_pred eeeeccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeeeee
Q 000385 1181 VRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYIQV 1236 (1588)
Q Consensus 1181 ~r~HYGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~q~ 1236 (1588)
-..-|+==.+.|.....-||...- .++||.--++-...+|.++.++.-..|
T Consensus 207 -~~~~G~~~~~rr~~l~~vgg~~~~----~~~ED~~l~~rl~~~G~~i~~~p~~~~ 257 (420)
T PRK11204 207 -FTVSGVITAFRKSALHEVGYWSTD----MITEDIDISWKLQLRGWDIRYEPRALC 257 (420)
T ss_pred -eEecceeeeeeHHHHHHhCCCCCC----cccchHHHHHHHHHcCCeEEeccccEE
Confidence 111132223334444445666532 368999999999999999988776554
No 7
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=88.34 E-value=4.2 Score=50.46 Aligned_cols=42 Identities=29% Similarity=0.532 Sum_probs=31.9
Q ss_pred CCCccccchhhhccccccccccCCccchHH-HHhhhhhhHHHhhcCC
Q 000385 1088 GKPENQNHAIIFTRGEALQTIDMNQDNYFE-EAFKMRNVLEEFLKSP 1133 (1588)
Q Consensus 1088 GKpeNQNhAiiF~RGe~lQtIDmNQDnYlE-E~lKmrnlL~Ef~~~~ 1133 (1588)
||+.+-|+|+=.++||++ +=|++|+.++ ++| +++++.|++++
T Consensus 118 Gka~AlN~gl~~s~g~~v--~~~DaD~~~~~d~L--~~l~~~f~~~~ 160 (439)
T TIGR03111 118 GKAKALNAAIYNSIGKYI--IHIDSDGKLHKDAI--KNMVTRFENNP 160 (439)
T ss_pred CHHHHHHHHHHHccCCEE--EEECCCCCcChHHH--HHHHHHHHhCC
Confidence 799999999999999995 5556788874 344 46788887543
No 8
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=87.88 E-value=0.73 Score=56.97 Aligned_cols=183 Identities=18% Similarity=0.178 Sum_probs=89.4
Q ss_pred hHHHHHH-HhCCCcEEEEeecccccccccccceEEEEEEecCCCcccceEEeecCCCCCcCCCCCCccccchhhhccccc
Q 000385 1026 NNILNLM-IKYPSLRVAYIDEREETVNEKSQKFHYSVLLKGGDKYDEEIYRIKLPGPPTDIGEGKPENQNHAIIFTRGEA 1104 (1588)
Q Consensus 1026 ~~i~~L~-~~~p~LrVAYide~~~~~~g~~~~~yyS~Lvk~~~g~~~~~yrikLpG~~pilGeGKpeNQNhAiiF~RGe~ 1104 (1588)
+-++.++ +.||+.+|--||+-.+ |+..+. ...+. .+...+.-+++++ | .||+.+.|+|+...+||+
T Consensus 92 ~~l~sll~q~yp~~eIivVdDgs~--D~t~~~--~~~~~----~~~~~v~vv~~~~-n----~Gka~AlN~gl~~a~~d~ 158 (444)
T PRK14583 92 ETIHAALAQTYTNIEVIAINDGSS--DDTAQV--LDALL----AEDPRLRVIHLAH-N----QGKAIALRMGAAAARSEY 158 (444)
T ss_pred HHHHHHHcCCCCCeEEEEEECCCC--ccHHHH--HHHHH----HhCCCEEEEEeCC-C----CCHHHHHHHHHHhCCCCE
Confidence 3455555 4699999888876432 111100 00000 0011122233444 3 489999999999999999
Q ss_pred cccccCCccchHHHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhhccccccchhhHHHHHHhhhccccceeee
Q 000385 1105 LQTIDMNQDNYFEEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSLAWFMSNQETSFVTISQRILAYPLRVRFH 1184 (1588)
Q Consensus 1105 lQtIDmNQDnYlEE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~La~~~a~qE~sF~Tl~qR~la~Pl~~r~H 1184 (1588)
+-++|+. +.++.- -++.+.+.|++++ .+.+++.+-.+...+ +.++....++-.++..+.+|.... .+.-+-
T Consensus 159 iv~lDAD--~~~~~d-~L~~lv~~~~~~~----~~g~v~g~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~-~g~~~~ 229 (444)
T PRK14583 159 LVCIDGD--ALLDKN-AVPYLVAPLIANP----RTGAVTGNPRIRTRS-TLIGRVQVGEFSSIIGLIKRTQRV-YGQVFT 229 (444)
T ss_pred EEEECCC--CCcCHH-HHHHHHHHHHhCC----CeEEEEccceecCCC-cchhhHHHHHHHHHHHHHHHHHHH-hCCceE
Confidence 9999874 444322 2234556665433 233443322222221 222322222222222223332211 000000
Q ss_pred -ccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeee
Q 000385 1185 -YGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYI 1234 (1588)
Q Consensus 1185 -YGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~ 1234 (1588)
=|+==.|.|.-...=||-+- -.+.||+--|+....+|.+|.+++-.
T Consensus 230 ~sG~~~~~rr~al~~vGg~~~----~~i~ED~dl~~rl~~~G~~i~~~p~a 276 (444)
T PRK14583 230 VSGVVAAFRRRALADVGYWSP----DMITEDIDISWKLQLKHWSVFFEPRG 276 (444)
T ss_pred ecCceeEEEHHHHHHcCCCCC----CcccccHHHHHHHHHcCCeEEEeecc
Confidence 01111122222222344431 14689999999999999999987743
No 9
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=78.52 E-value=1.1 Score=59.94 Aligned_cols=172 Identities=18% Similarity=0.205 Sum_probs=106.7
Q ss_pred CCCCccccchhhhccccccccccCCccchHH-HHhhhhhhHHHhhcCCCCCCCceEecccceeeccc-----chhhcccc
Q 000385 1087 EGKPENQNHAIIFTRGEALQTIDMNQDNYFE-EAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGS-----VSSLAWFM 1160 (1588)
Q Consensus 1087 eGKpeNQNhAiiF~RGe~lQtIDmNQDnYlE-E~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~-----vs~La~~~ 1160 (1588)
.||..|-|||+-.++||++=++|+.. ..+ ++| ++++..|.+++ .+.+|+.+=+.++.. .+....+.
T Consensus 325 ~gKAGnLN~aL~~a~GEyIavlDAD~--ip~pdfL--~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~~~~~~~ 396 (852)
T PRK11498 325 HAKAGNINNALKYAKGEFVAIFDCDH--VPTRSFL--QMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLGRFRKTP 396 (852)
T ss_pred cchHHHHHHHHHhCCCCEEEEECCCC--CCChHHH--HHHHHHHHhCC----CeEEEEcceeccCCchHHHhhHHHhhcc
Confidence 37999999999999999999999864 332 222 23455665543 478888776665432 22211222
Q ss_pred ccchhhHHHHHHhhhccccceeeeccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEee-eeeccc
Q 000385 1161 SNQETSFVTISQRILAYPLRVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEY-IQVGKG 1239 (1588)
Q Consensus 1161 a~qE~sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey-~q~GKG 1239 (1588)
.-+| .|-.+.|+-... ....+--|+-=++.|.-...=||..-- -++||+--++....+|-++.+..= ...|-
T Consensus 397 ~e~~-~fy~~iq~g~~~-~~a~~~~Gs~aviRReaLeeVGGfd~~----titED~dlslRL~~~Gyrv~yl~~~~a~gl- 469 (852)
T PRK11498 397 NEGT-LFYGLVQDGNDM-WDATFFCGSCAVIRRKPLDEIGGIAVE----TVTEDAHTSLRLHRRGYTSAYMRIPQAAGL- 469 (852)
T ss_pred cchh-HHHHHHHhHHHh-hcccccccceeeeEHHHHHHhcCCCCC----ccCccHHHHHHHHHcCCEEEEEeccceeEE-
Confidence 2222 344455554332 334445577667777777777888642 379999999999999999998643 33332
Q ss_pred cccccccccccc---eeccCCCccccchhhHHhhccccchh
Q 000385 1240 RDVGMNQISSFE---AKVANGNGEQTLSRDVYRLGRRFDFF 1277 (1588)
Q Consensus 1240 RDvG~~qI~~Fe---~Ki~~G~gEQ~lSRd~yrLg~~ldf~ 1277 (1588)
.=.++..+- .+-+.| ..|.+.++---++..+.+.
T Consensus 470 ---aPesl~~~~~QR~RWarG-~lQi~r~~~pl~~~gL~~~ 506 (852)
T PRK11498 470 ---ATESLSAHIGQRIRWARG-MVQIFRLDNPLTGKGLKLA 506 (852)
T ss_pred ---CCCCHHHHHHHHHHHHHH-HHHHHHHhChhccCCCCHH
Confidence 223454442 345667 5677766544457777764
No 10
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=68.30 E-value=12 Score=40.58 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=65.4
Q ss_pred CCCCccccchhhhccccccccccCCccchH-HHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhhccccccchh
Q 000385 1087 EGKPENQNHAIIFTRGEALQTIDMNQDNYF-EEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSLAWFMSNQET 1165 (1588)
Q Consensus 1087 eGKpeNQNhAiiF~RGe~lQtIDmNQDnYl-EE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~La~~~a~qE~ 1165 (1588)
.||..|.|+++-..+||++=.+|.. ..+ .++|+ .+++.+.. ..+.+||-+
T Consensus 72 ~~~~~~~n~g~~~a~~d~i~~~D~D--~~~~~~~l~--~l~~~~~~-----~~~~~v~~~-------------------- 122 (196)
T cd02520 72 NPKVNNLIKGYEEARYDILVISDSD--ISVPPDYLR--RMVAPLMD-----PGVGLVTCL-------------------- 122 (196)
T ss_pred CHhHHHHHHHHHhCCCCEEEEECCC--ceEChhHHH--HHHHHhhC-----CCCCeEEee--------------------
Confidence 3678889999999999999999874 322 22332 34555532 135555543
Q ss_pred hHHHHHHhhhccccceeeeccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeeeee
Q 000385 1166 SFVTISQRILAYPLRVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYIQV 1236 (1588)
Q Consensus 1166 sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~q~ 1236 (1588)
...|+==++.|-.+-.-||-+. ....+.||..-++....+|.+|.+++-..+
T Consensus 123 -----------------~~~g~~~~~r~~~~~~~ggf~~--~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~ 174 (196)
T cd02520 123 -----------------CAFGKSMALRREVLDAIGGFEA--FADYLAEDYFLGKLIWRLGYRVVLSPYVVM 174 (196)
T ss_pred -----------------cccCceeeeEHHHHHhccChHH--HhHHHHHHHHHHHHHHHcCCeEEEcchhee
Confidence 2223333444555555567632 123468999999999999999999877543
No 11
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=52.57 E-value=19 Score=39.41 Aligned_cols=138 Identities=19% Similarity=0.176 Sum_probs=79.4
Q ss_pred CCCCccccchhhhccccccccccCCccchHHHHhhhhhhHHHhhcCCCCCCCceEecccceeecccch-hhccccccchh
Q 000385 1087 EGKPENQNHAIIFTRGEALQTIDMNQDNYFEEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVS-SLAWFMSNQET 1165 (1588)
Q Consensus 1087 eGKpeNQNhAiiF~RGe~lQtIDmNQDnYlEE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs-~La~~~a~qE~ 1165 (1588)
-||.-|-|+|+=..+||++-++|. |.++++. .+.++++.+++++ .+.+++.+.+...++.. .++........
T Consensus 70 ~~~~~~~n~~~~~a~~d~i~~lD~--D~~~~~~-~l~~l~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 142 (234)
T cd06421 70 HAKAGNLNNALAHTTGDFVAILDA--DHVPTPD-FLRRTLGYFLDDP----KVALVQTPQFFYNPDPFDWLADGAPNEQE 142 (234)
T ss_pred CCcHHHHHHHHHhCCCCEEEEEcc--ccCcCcc-HHHHHHHHHhcCC----CeEEEecceEEecCCcchhHHHHHHHHHH
Confidence 367888999999999999999986 7888654 6667888886532 35666655443333221 12222222333
Q ss_pred hHHHHHHhhhccccceeeeccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeeeee
Q 000385 1166 SFVTISQRILAYPLRVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYIQV 1236 (1588)
Q Consensus 1166 sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~q~ 1236 (1588)
.|.+..+... .+.++-.=-|.-=++.|..+..=||... ..+.||..-+......|.+|.+.....|
T Consensus 143 ~~~~~~~~~~-~~~~~~~~~g~~~~~r~~~~~~ig~~~~----~~~~eD~~l~~r~~~~g~~i~~~~~~~~ 208 (234)
T cd06421 143 LFYGVIQPGR-DRWGAAFCCGSGAVVRREALDEIGGFPT----DSVTEDLATSLRLHAKGWRSVYVPEPLA 208 (234)
T ss_pred HHHHHHHHHH-hhcCCceecCceeeEeHHHHHHhCCCCc----cceeccHHHHHHHHHcCceEEEecCccc
Confidence 3332211111 1011111113333344444444466652 2457999999999999999988665444
No 12
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=46.15 E-value=1.3e+02 Score=36.66 Aligned_cols=130 Identities=15% Similarity=0.131 Sum_probs=66.3
Q ss_pred CCCccccchhhhccccccccccCCccchH-HHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhh-cccccc-ch
Q 000385 1088 GKPENQNHAIIFTRGEALQTIDMNQDNYF-EEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSL-AWFMSN-QE 1164 (1588)
Q Consensus 1088 GKpeNQNhAiiF~RGe~lQtIDmNQDnYl-EE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~L-a~~~a~-qE 1164 (1588)
||..|.++++--.+||++=..|++ ... .+.| +.+++.|+..+ +.+|+.. + .......+ +...+. .+
T Consensus 113 ~K~~~l~~~~~~a~ge~i~~~DaD--~~~~p~~L--~~lv~~~~~~~-----v~~V~~~-~-~~~~~~~~~~~l~~~~~~ 181 (373)
T TIGR03472 113 RKVSNLINMLPHARHDILVIADSD--ISVGPDYL--RQVVAPLADPD-----VGLVTCL-Y-RGRPVPGFWSRLGAMGIN 181 (373)
T ss_pred hHHHHHHHHHHhccCCEEEEECCC--CCcChhHH--HHHHHHhcCCC-----cceEecc-c-cCCCCCCHHHHHHHHHhh
Confidence 688899988888999999999985 333 3343 35677775322 3333321 1 11111111 111000 00
Q ss_pred hhHHHHHHhhhccccceeeeccCC--cccccccccccCcccccccccccchhhhhccccccccceeeEEee
Q 000385 1165 TSFVTISQRILAYPLRVRFHYGHP--DIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEY 1233 (1588)
Q Consensus 1165 ~sF~Tl~qR~la~Pl~~r~HYGHP--D~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey 1233 (1588)
..|.-. -..+.+++ +...++. =.+-|...-.-||...- .-++.||..-|.....+|.+|..++.
T Consensus 182 ~~~~~~--~~~~~~~~-~~~~~~G~~~a~RR~~l~~iGGf~~~--~~~~~ED~~l~~~i~~~G~~v~~~~~ 247 (373)
T TIGR03472 182 HNFLPS--VMVARALG-RARFCFGATMALRRATLEAIGGLAAL--AHHLADDYWLGELVRALGLRVVLAPV 247 (373)
T ss_pred hhhhHH--HHHHHhcc-CCccccChhhheeHHHHHHcCChHHh--cccchHHHHHHHHHHHcCCeEEecch
Confidence 001000 00111111 1111221 13444445556777421 12467999999999999999987654
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=39.44 E-value=1.8e+02 Score=38.96 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=75.3
Q ss_pred CCCCccccchhhh--ccccccccccCCccchH-HHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhhccccccc
Q 000385 1087 EGKPENQNHAIIF--TRGEALQTIDMNQDNYF-EEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSLAWFMSNQ 1163 (1588)
Q Consensus 1087 eGKpeNQNhAiiF--~RGe~lQtIDmNQDnYl-EE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~La~~~a~q 1163 (1588)
+.|.-|-|+++=- .++||+=+.|++- .+ -+++ +.+.+.++.++ .+.+|-.+-.+.. .-+.++...+--
T Consensus 204 ~~KaGNl~~~~~~~~~~~eyivvLDADs--~m~~d~L--~~lv~~m~~dP----~vGlVQt~~~~~n-~~slfaR~qqf~ 274 (691)
T PRK05454 204 GRKAGNIADFCRRWGGAYDYMVVLDADS--LMSGDTL--VRLVRLMEANP----RAGLIQTLPVAVG-ADTLFARLQQFA 274 (691)
T ss_pred CccHHHHHHHHHhcCCCcCEEEEEcCCC--CCCHHHH--HHHHHHHhhCc----CEEEEeCCccCcC-CCCHHHHHHHHH
Confidence 4577788877766 4459999999853 33 2232 34666776443 3445543222222 123233222111
Q ss_pred hhhHHHHHHhhhccccceeeec-cCCcccccccccccCcccccc-----cccccchhhhhccccccccceeeEEeee
Q 000385 1164 ETSFVTISQRILAYPLRVRFHY-GHPDIFDRIFHITRGGISKAS-----KTINLSEDIFAGMNSTLRGGYITHHEYI 1234 (1588)
Q Consensus 1164 E~sF~Tl~qR~la~Pl~~r~HY-GHPD~fd~~f~~trGGvSKAs-----k~i~lsEDIfaG~n~~lRgG~i~h~ey~ 1234 (1588)
...++.++++-++.=-++--+| ||-=++++.=+...||..+=. .+--||||+--|.-...+|-+|.+...+
T Consensus 275 ~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~ 351 (691)
T PRK05454 275 TRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDL 351 (691)
T ss_pred HHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCcc
Confidence 1122222222221100111223 887788877666666553311 1345999999999999999999998775
No 14
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=32.99 E-value=4.6e+02 Score=35.26 Aligned_cols=135 Identities=18% Similarity=0.223 Sum_probs=83.7
Q ss_pred CCCccccchhhhccccccccccCCccchH-HHHhhhhhhHHHhhcCCCCCCCceEecccceeecc-----cchhhccccc
Q 000385 1088 GKPENQNHAIIFTRGEALQTIDMNQDNYF-EEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTG-----SVSSLAWFMS 1161 (1588)
Q Consensus 1088 GKpeNQNhAiiF~RGe~lQtIDmNQDnYl-EE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~-----~vs~La~~~a 1161 (1588)
||+.|=|||+=.++||++=++|+.. .. .++| ++++..|++++ .+++++.+=+.++. |.+. ...+.
T Consensus 215 ~KAgnLN~al~~a~gd~Il~lDAD~--v~~pd~L--~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~~-~~~~~ 285 (713)
T TIGR03030 215 AKAGNINNALKHTDGELILIFDADH--VPTRDFL--QRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLGT-FRRMP 285 (713)
T ss_pred CChHHHHHHHHhcCCCEEEEECCCC--CcChhHH--HHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhHH-HHHhh
Confidence 7899999999999999999999864 33 2333 24556675543 46777665333322 2222 12222
Q ss_pred cchhhHHHHHHhhhccccceeeeccCCcccccccccccCcccccccccccchhhhhccccccccceeeEEeeeee
Q 000385 1162 NQETSFVTISQRILAYPLRVRFHYGHPDIFDRIFHITRGGISKASKTINLSEDIFAGMNSTLRGGYITHHEYIQV 1236 (1588)
Q Consensus 1162 ~qE~sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGvSKAsk~i~lsEDIfaG~n~~lRgG~i~h~ey~q~ 1236 (1588)
+....|-...|+-... .+..+.-|+-=++.|.-...=||..- -.++||.--|+...-+|-++.+..=..+
T Consensus 286 ~e~~~f~~~i~~g~~~-~~~~~~~Gs~~~iRR~al~~iGGf~~----~~vtED~~l~~rL~~~G~~~~y~~~~~~ 355 (713)
T TIGR03030 286 NENELFYGLIQDGNDF-WNAAFFCGSAAVLRREALDEIGGIAG----ETVTEDAETALKLHRRGWNSAYLDRPLI 355 (713)
T ss_pred hHHHHHHHHHHHHHhh-hCCeeecCceeEEEHHHHHHcCCCCC----CCcCcHHHHHHHHHHcCCeEEEeccccc
Confidence 2222333333443322 33444457766677766667788863 3479999999998889999888764433
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=29.49 E-value=30 Score=42.03 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=72.8
Q ss_pred cCCCCCCccccchhhhccccccccccCC---ccchHHHHhhhhhhHHHhhcCCCCCCCceEecccceeeccc-chhhccc
Q 000385 1084 DIGEGKPENQNHAIIFTRGEALQTIDMN---QDNYFEEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGS-VSSLAWF 1159 (1588)
Q Consensus 1084 ilGeGKpeNQNhAiiF~RGe~lQtIDmN---QDnYlEE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~-vs~La~~ 1159 (1588)
.=..||+.++|.|+=..+||++=++|+. -.++|.|+.+ .|+.... .+++|.+.+....- .+.++..
T Consensus 120 ~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~------~f~~~~~----~~v~~~~~~~~~~~~~~~l~~~ 189 (439)
T COG1215 120 KKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVS------PFEDPPV----GAVVGTPRIRNRPDPSNLLGRI 189 (439)
T ss_pred ccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHh------hhcCCCe----eEEeCCceeeecCChhhhcchh
Confidence 4567999999999999999999999986 3556655544 6765432 25777665544221 1222211
Q ss_pred cccchhhHHHHHHhhhccccceeeeccCCcccccccccccCccccccc-----------ccccchhhhhcccccccccee
Q 000385 1160 MSNQETSFVTISQRILAYPLRVRFHYGHPDIFDRIFHITRGGISKASK-----------TINLSEDIFAGMNSTLRGGYI 1228 (1588)
Q Consensus 1160 ~a~qE~sF~Tl~qR~la~Pl~~r~HYGHPD~fd~~f~~trGGvSKAsk-----------~i~lsEDIfaG~n~~lRgG~i 1228 (1588)
-+.......-... ..+...| ...+.+|.+.|=| .-.+.||.=-++-...+|.++
T Consensus 190 ~~~~~~~~~~~~~-------~~~~~~g--------~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~ 254 (439)
T COG1215 190 QAIEYLSAFYFRL-------RAASKGG--------LISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRV 254 (439)
T ss_pred cchhhhhhHHHhh-------hhhhhcC--------CeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeE
Confidence 1111111111111 1122233 3334444444433 234679988888888999999
Q ss_pred eEEeee
Q 000385 1229 THHEYI 1234 (1588)
Q Consensus 1229 ~h~ey~ 1234 (1588)
.++.--
T Consensus 255 ~~~~~~ 260 (439)
T COG1215 255 VYVPEA 260 (439)
T ss_pred EEeecc
Confidence 997654
No 16
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=26.81 E-value=47 Score=42.68 Aligned_cols=26 Identities=19% Similarity=0.070 Sum_probs=23.8
Q ss_pred ccchhhhhccccccccceeeEEeeee
Q 000385 1210 NLSEDIFAGMNSTLRGGYITHHEYIQ 1235 (1588)
Q Consensus 1210 ~lsEDIfaG~n~~lRgG~i~h~ey~q 1235 (1588)
+|.||+--|+....+|.++.++.+--
T Consensus 260 sLTED~dLglRL~~~G~rv~y~p~ai 285 (504)
T PRK14716 260 SLTEDYDIGLRLKRAGFRQIFVRVRA 285 (504)
T ss_pred CcchHHHHHHHHHHCCCEEEEecccc
Confidence 79999999999999999999987753
No 17
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=24.54 E-value=30 Score=34.45 Aligned_cols=75 Identities=27% Similarity=0.496 Sum_probs=45.7
Q ss_pred CCCCCCccccchhhhccccccccccCCcc------chHHHHhhhhhhHHHhhcCCCCCCCceEecccceeecccchhhcc
Q 000385 1085 IGEGKPENQNHAIIFTRGEALQTIDMNQD------NYFEEAFKMRNVLEEFLKSPSGRREPTILGLREHIFTGSVSSLAW 1158 (1588)
Q Consensus 1085 lGeGKpeNQNhAiiF~RGe~lQtIDmNQD------nYlEE~lKmrnlL~Ef~~~~~g~~~~~IlG~RE~IFt~~vs~La~ 1158 (1588)
+|+|.|+ |+|.-+|-| .++.++++.+ .+..|+....|..--+-... ...+.++|
T Consensus 9 ~G~G~~~-~~H~~Lf~~--~L~~~Gi~~~~~~~~~~~~~~~~~~~n~~~~~~~~~--~~~~~~lG--------------- 68 (106)
T PF14518_consen 9 MGNGDPE-RSHPELFRR--FLRALGIDDEPGAYRDPYPPETLALINLFLALCLHR--SHYPEALG--------------- 68 (106)
T ss_dssp TTTT-GG-G-HHHHHHH--HHHHTT-----TT-----HHHHHHHHHHHHHH--H---SSTHHHHH---------------
T ss_pred hCCCCcc-ccHHHHHHH--HHHHcCCCCccccccccCCHHHHHHHHHHHHhcccc--hhHHHHHH---------------
Confidence 5899987 499999977 7888888866 67789999888776663311 12244444
Q ss_pred ccccchhhHHHHHHhhhccccc
Q 000385 1159 FMSNQETSFVTISQRILAYPLR 1180 (1588)
Q Consensus 1159 ~~a~qE~sF~Tl~qR~la~Pl~ 1180 (1588)
++.+-|.+.-...+++..- ++
T Consensus 69 ~~~~~E~~~~~~~~~~~~~-l~ 89 (106)
T PF14518_consen 69 ALLATESSVPQIYRRLIKG-LR 89 (106)
T ss_dssp HHHHHHTHHHHHHHHHHHH-HH
T ss_pred HHHHHhhcChHHHHHHHHH-HH
Confidence 4558888888887766543 55
No 18
>PHA03048 IMV membrane protein; Provisional
Probab=23.90 E-value=1.2e+02 Score=30.68 Aligned_cols=15 Identities=40% Similarity=0.636 Sum_probs=12.7
Q ss_pred cchhhhhhhhccccc
Q 000385 1274 FDFFRMLSFYFTTVG 1288 (1588)
Q Consensus 1274 ldf~R~lSfyy~~~G 1288 (1588)
||.+++++=||+++=
T Consensus 1 MDi~~~~~ny~S~vl 15 (93)
T PHA03048 1 MDIMGMISNYFSTAL 15 (93)
T ss_pred CCHHHHhhcccchHH
Confidence 689999999998753
No 19
>PF10569 Thiol-ester_cl: Alpha-macro-globulin thiol-ester bond-forming region; InterPro: IPR019565 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins. The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ]. This short highly conserved region of proteinase-binding alpha-macro-globulins contains the cysteine and a glutamine of a thiol-ester bond that is cleaved at the moment of proteinase binding, and mediates the covalent binding of the alpha-macro-globulin to the proteinase. The GCGEQ motif is highly conserved. ; PDB: 2B39_B 2PN5_A 4ACQ_C 1HZF_A 2WIN_H 2I07_B 2ICF_B 2XWJ_D 3G6J_B 2NOJ_C ....
Probab=20.60 E-value=36 Score=28.06 Aligned_cols=12 Identities=50% Similarity=0.634 Sum_probs=8.5
Q ss_pred ccCCCccccchh
Q 000385 1254 VANGNGEQTLSR 1265 (1588)
Q Consensus 1254 i~~G~gEQ~lSR 1265 (1588)
.-.|+|||++|+
T Consensus 8 ~P~GCgEQtm~~ 19 (31)
T PF10569_consen 8 YPYGCGEQTMSS 19 (31)
T ss_dssp S--SSTTHHHHH
T ss_pred cCCCcHHHHHHH
Confidence 346999999985
Done!