Your job contains 1 sequence.
>000387
MSKSNPRPNLSQNPLAEYFTNSLMAQNQLIDSLTSHISLYHSHSLSSNPNPSSNPRSSIL
KWFASLTVHQRQAHLTIVDSKFAQLLIQMLGKLRANGHGFFIILPDLPSRDPPYLPGLCY
KKSRGLLSRVAESNESGRWVFESTRLFSSREGEKIEEWSCPVNCLDTFTVSVEFVENVDR
FIDIMDEISNGGFLRGEESELAGDWVEFDWLKAKGYYSIEAFIVNRLEVGLRLAWLNCNN
GKKRGVKLKEKLNAAGMAANVYWRKKGCVDWWMNLDDAMRRKVLTVILGKAAKSLTHEVL
KEASNALEDGMWLFNAGMKQSSRFYHSKSLQRTISTLSVDVECGLAISPASLSGIPASLA
TVFSGLFVLQDITTMVLSSQHNEYDIEKIFFSSLRFVSTTTDCLLRKLRGLLMVVSLDCT
KLELFGEGNFKSSPNKSKEKPSTIGRRKKCRACSTKRQNPLPKSALDELSLDKLPKDPEG
ALTDTEKVDLMGSDKVPGISNGKDINRETSTSEMEMVVCHQEHARALVAGKGRTNARKTK
TVKNKNKNCTYNNPVPVKDPKVSVLETSSSISLQDEVEKYDKLSAQNVSVDNSTCSNVLA
SNQSSCTSASVPAREGIATQSTQEDCVVNSVNSECRRFSNGRIDNQTQHFLQETTDSKVE
CNIISPDMPARDLDNAFGNSISGINFQNSFHESETGAISVLPDKGIEALEIKKESAVTQD
QRNESFFGTALKSSLECPSYEWPTIAPVYFPSISSHLLPATDRLHLDVGHNWHNHVRQPF
VPTLHQARNHPFDGGCNQILSQPLPMSLDWPPMVQNVSGIAPSVTCNYDSGFISSRQSGF
QQNFATKGMQFNAKTSDDEGKCSGDFMDLPEPTTTQEQGDECDSHWLSEEELEVHTVSGI
DYNQYFGGGVMYWNTSDHPGTGFSRPPSLSSDDSSWAWHEADIKRAVDDMVAFSSSYSTN
GLTSPTAASFCSPFDPLGPGHQAFSYVVPGNEVPGKVLHSSSTTTDVATEEEISGSFASL
SGDVDSKALDTLPCPILRPIIIPNLSRERSRSDFKRSHEHKSPCVPPSRREQPRIKRPPS
PVVLCVPRAPRPPPPSPVSDSRKTRGFPTVRSGSSSPRHWGVRGWYHEGTTSEEGCVRMD
GSEVVWPSWRNKNLSAHPMIQPLSGALLQDHLIAISQLARDQEHPDVAFPLQPLEVQNCP
TRKASLSLMHSLLHEEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGS
NATGLSLPSSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWVKSD
SLKTVENTAIPIIMLVVEVPHDLIASAASSVQSPKEDAAHTTLKHDNHVHSDMVALDDSA
SPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLA
DRSLDQSYSGGLSSYCLMLLITRFLQHEHHLGRPINQNYGRLLMDFLYFFGNVFDPRQMR
ISVQGSGVYIKRERGYSIDPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTS
LTPADDQCSRPPYRLLPKIIPSISLFIS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000387
(1588 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|I3LUY3 - symbol:PAPD5 "Uncharacterized protein"... 260 5.2e-25 2
UNIPROTKB|F1NJM3 - symbol:PAPD7 "Uncharacterized protein"... 245 8.6e-25 3
UNIPROTKB|Q8NDF8 - symbol:PAPD5 "PAP-associated domain-co... 260 1.1e-24 2
UNIPROTKB|F1NCH7 - symbol:PAPD5 "Uncharacterized protein"... 253 1.6e-24 2
UNIPROTKB|E9PC61 - symbol:PAPD5 "PAP-associated domain-co... 260 1.7e-24 2
MGI|MGI:1917820 - symbol:Papd5 "PAP associated domain con... 260 1.9e-24 2
UNIPROTKB|F1PHH1 - symbol:PAPD5 "Uncharacterized protein"... 260 2.4e-24 2
UNIPROTKB|B4DV38 - symbol:PAPD5 "PAP-associated domain-co... 260 2.8e-24 2
UNIPROTKB|J9P5I2 - symbol:PAPD5 "Uncharacterized protein"... 260 1.1e-23 3
UNIPROTKB|E1BX86 - symbol:PAPD7 "Uncharacterized protein"... 245 1.1e-23 3
UNIPROTKB|E2RJX8 - symbol:PAPD7 "Uncharacterized protein"... 248 1.9e-23 2
UNIPROTKB|J9P9B2 - symbol:PAPD5 "Uncharacterized protein"... 260 2.8e-23 3
RGD|1307356 - symbol:Papd7 "PAP associated domain contain... 244 5.2e-23 2
UNIPROTKB|Q5XG87 - symbol:PAPD7 "DNA polymerase sigma" sp... 244 5.2e-23 2
MGI|MGI:2682295 - symbol:Papd7 "PAP associated domain con... 244 5.2e-23 2
ZFIN|ZDB-GENE-041021-1 - symbol:papd7 "PAP associated dom... 250 6.1e-23 2
UNIPROTKB|E1BEH2 - symbol:PAPD7 "Uncharacterized protein"... 245 8.1e-23 2
FB|FBgn0030049 - symbol:Trf4-1 species:7227 "Drosophila m... 245 9.3e-23 2
UNIPROTKB|F1S0S9 - symbol:PAPD7 "Uncharacterized protein"... 243 2.2e-22 3
UNIPROTKB|F1MNP2 - symbol:F1MNP2 "Uncharacterized protein... 260 1.6e-21 2
FB|FBgn0039251 - symbol:Trf4-2 species:7227 "Drosophila m... 225 6.7e-21 2
TAIR|locus:2164047 - symbol:AT5G53770 "AT5G53770" species... 212 1.2e-18 3
ASPGD|ASPL0000029878 - symbol:cutB species:162425 "Emeric... 213 6.7e-17 2
DICTYBASE|DDB_G0274847 - symbol:DDB_G0274847 "nucleotidyl... 177 2.8e-16 6
SGD|S000005243 - symbol:TRF5 "Non-canonical poly(A) polym... 205 3.0e-16 2
SGD|S000005475 - symbol:PAP2 "Non-canonical poly(A) polym... 195 2.0e-15 2
POMBASE|SPAC12G12.13c - symbol:cid14 "poly(A) polymerase ... 210 2.9e-15 3
WB|WBGene00014115 - symbol:gld-4 species:6239 "Caenorhabd... 211 1.0e-13 2
CGD|CAL0005626 - symbol:orf19.429 species:5476 "Candida a... 151 8.0e-11 3
UNIPROTKB|H3BQM0 - symbol:PAPD5 "PAP-associated domain-co... 120 1.3e-10 3
RGD|1309587 - symbol:Papd5 "PAP associated domain contain... 120 1.4e-10 3
UNIPROTKB|J9PAB7 - symbol:PAPD5 "Uncharacterized protein"... 120 4.3e-10 4
UNIPROTKB|G4NER0 - symbol:MGG_00073 "DNA polymerase sigma... 163 4.4e-08 3
DICTYBASE|DDB_G0295737 - symbol:DDB_G0295737 "PAP/25A-ass... 138 3.3e-07 3
POMBASE|SPCC663.12 - symbol:cid12 "poly(A) polymerase Cid... 131 3.2e-05 2
>UNIPROTKB|I3LUY3 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
Ensembl:ENSSSCT00000025469 Uniprot:I3LUY3
Length = 500
Score = 260 (96.6 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 81 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 133
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 134 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 193
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 194 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 253
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 254 SSYGAMQVKQAFDYAYVVLSHAVSPI 279
Score = 109 (43.4 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 3 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 61
Query: 1275 VV 1276
VV
Sbjct: 62 VV 63
Score = 40 (19.1 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 37 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 69
>UNIPROTKB|F1NJM3 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 EMBL:AADN02007996 EMBL:AADN02007997
EMBL:AADN02007998 EMBL:AADN02007999 EMBL:AADN02008000
EMBL:AADN02008001 EMBL:AADN02008002 IPI:IPI00571796
Ensembl:ENSGALT00000021321 ArrayExpress:F1NJM3 Uniprot:F1NJM3
Length = 370
Score = 245 (91.3 bits), Expect = 8.6e-25, Sum P(3) = 8.6e-25
Identities = 60/174 (34%), Positives = 94/174 (54%)
Query: 1396 TSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSY 1455
T V++DISF TG++ +KE +++ L LVLKQFL R L++ ++GG+SSY
Sbjct: 97 TEVKVDISFNV--ETGVKAARFIKEYMKKYTLLPYLILVLKQFLLQRDLNEVFTGGISSY 154
Query: 1456 CLMLLITRFLQ-HEHHLGRPINQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER 1514
L+L+ FLQ H R ++N G LL++F +G F+ + I ++ G YI +E
Sbjct: 155 SLILMAISFLQLHPRIDARRADENLGMLLIEFFELYGRNFNYLKTGIRIKNGGAYIAKEE 214
Query: 1515 -------GYSIDPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
GY + I+DP P N+VGR+ + Q + F AY +L ++ L
Sbjct: 215 IMKVMTNGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 110 (43.8 bits), Expect = 8.6e-25, Sum P(3) = 8.6e-25
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVIKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
Score = 47 (21.6 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHNHVRQPFVPTLHQA-RNH 790
WPT F S S+ L LP +D + L V W +P + L QA R H
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSD-IDLVVFGKWE----RPPLQLLEQALRKH 71
Score = 39 (18.8 bits), Expect = 8.6e-25, Sum P(3) = 8.6e-25
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 1321 SLKTVENTAIPIIMLV---VEVPHDLIASAASSVQSPK 1355
S+K ++ +PII L EV D+ + + V++ +
Sbjct: 78 SIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAAR 115
>UNIPROTKB|Q8NDF8 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0071044
GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058 EMBL:AK001141
EMBL:AK097589 EMBL:AF089897 EMBL:AL833922 IPI:IPI00383794
IPI:IPI00550722 IPI:IPI00940660 IPI:IPI01011361
RefSeq:NP_001035375.2 UniGene:Hs.514342 ProteinModelPortal:Q8NDF8
SMR:Q8NDF8 DIP:DIP-59183N IntAct:Q8NDF8 STRING:Q8NDF8
PhosphoSite:Q8NDF8 DMDM:59800139 PaxDb:Q8NDF8 PRIDE:Q8NDF8
GeneID:64282 KEGG:hsa:64282 CTD:64282 GeneCards:GC16P050186
HGNC:HGNC:30758 MIM:605540 neXtProt:NX_Q8NDF8 PharmGKB:PA134949693
HOGENOM:HOG000290646 HOVERGEN:HBG053489 GenomeRNAi:64282
NextBio:66196 CleanEx:HS_PAPD5 Genevestigator:Q8NDF8 Uniprot:Q8NDF8
Length = 572
Score = 260 (96.6 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 200 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 252
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 253 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 312
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 313 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 372
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 373 SSYGAMQVKQAFDYAYVVLSHAVSPI 398
Score = 109 (43.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 122 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 180
Query: 1275 VV 1276
VV
Sbjct: 181 VV 182
Score = 40 (19.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 156 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 188
>UNIPROTKB|F1NCH7 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
EMBL:AADN02038455 EMBL:AADN02038456 EMBL:AADN02038457
IPI:IPI00597559 Ensembl:ENSGALT00000006125 Uniprot:F1NCH7
Length = 501
Score = 253 (94.1 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 65/206 (31%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH+ + + LD + P T S T V++DISF + G++ L+K+ +
Sbjct: 81 KHNVADENSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVKAAQLIKDFIK 133
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 134 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACTPNANYGVL 193
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 194 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSMLYIEDPLQPGNDVGR 253
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 254 SSYGAMQVKQAFDYAYVVLSHAVSPI 279
Score = 112 (44.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F K ++ + + + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 3 EEIIDFYKYMSPRHEEERMRME-VVNRIENVIKELWPNADVQIFGSFKTGLYLPTSDIDL 61
Query: 1275 VV 1276
VV
Sbjct: 62 VV 63
Score = 63 (27.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 29/143 (20%), Positives = 58/143 (40%)
Query: 1280 PVRNLEPIKEAGILEGRNGIKETCLQHAARYL--ANQEW-VKSDSLKTVENTAIPIIM-- 1334
P+ P E + GR I+ T Q A Y +++W ++S + + + +I+
Sbjct: 278 PIAKYYPNNETESILGRI-IRVT--QEVATYRDWISKQWGMQSRTESSCNGNGVTLIVDN 334
Query: 1335 LVVEVPHDLIASAASSVQSPKEDAAHTTLKHDNHVHSDMVALDDSASPKCSHTSSDNIKA 1394
++ ++ +A ++ P+ + T KH ++ S ++ S S SD
Sbjct: 335 QQLDKCNNNLAEENEALGKPRNKTSETLSKHSSNSSSGPLSSSSSTLSSSSDVDSDGTPC 394
Query: 1395 ATSVRLDISFKSPSHTGLQTTDL 1417
TS +L + + G Q L
Sbjct: 395 KTSKQLSCRQPTTNRVGSQEVSL 417
>UNIPROTKB|E9PC61 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 IPI:IPI00940660 HGNC:HGNC:30758
ProteinModelPortal:E9PC61 SMR:E9PC61 PRIDE:E9PC61
Ensembl:ENST00000357464 ArrayExpress:E9PC61 Bgee:E9PC61
Uniprot:E9PC61
Length = 619
Score = 260 (96.6 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 200 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 252
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 253 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 312
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 313 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 372
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 373 SSYGAMQVKQAFDYAYVVLSHAVSPI 398
Score = 109 (43.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 122 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 180
Query: 1275 VV 1276
VV
Sbjct: 181 VV 182
Score = 40 (19.1 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 156 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 188
>MGI|MGI:1917820 [details] [associations]
symbol:Papd5 "PAP associated domain containing 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR002934 Pfam:PF01909 MGI:MGI:1917820
Pfam:PF03828 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0071044 GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058
CTD:64282 HOGENOM:HOG000290646 HOVERGEN:HBG053489 EMBL:AK030850
EMBL:AK077553 EMBL:BC080314 EMBL:BC144796 EMBL:BC145737
IPI:IPI00223851 RefSeq:NP_001157969.1 RefSeq:NP_001157970.1
RefSeq:NP_001157971.1 UniGene:Mm.37825 ProteinModelPortal:Q68ED3
SMR:Q68ED3 PhosphoSite:Q68ED3 PRIDE:Q68ED3 GeneID:214627
KEGG:mmu:214627 UCSC:uc009mrf.1 InParanoid:A6H635 OrthoDB:EOG48SGT7
NextBio:374402 Bgee:Q68ED3 CleanEx:MM_PAPD5 Genevestigator:Q68ED3
GermOnline:ENSMUSG00000036779 Uniprot:Q68ED3
Length = 633
Score = 260 (96.6 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 214 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 266
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 267 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 326
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 327 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 386
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 387 SSYGAMQVKQAFDYAYVVLSHAVSPI 412
Score = 109 (43.4 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 136 EEISDFYEYMSPRPEEEKMRME-VVSRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 194
Query: 1275 VV 1276
VV
Sbjct: 195 VV 196
Score = 40 (19.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 170 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 202
>UNIPROTKB|F1PHH1 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000015808 Uniprot:F1PHH1
Length = 673
Score = 260 (96.6 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 254 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 306
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 307 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 366
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 367 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 426
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 427 SSYGAMQVKQAFDYAYVVLSHAVSPI 452
Score = 109 (43.4 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 176 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 234
Query: 1275 VV 1276
VV
Sbjct: 235 VV 236
Score = 40 (19.1 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 210 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 242
>UNIPROTKB|B4DV38 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 RefSeq:NP_001035375.2 UniGene:Hs.514342 GeneID:64282
KEGG:hsa:64282 CTD:64282 HGNC:HGNC:30758 PharmGKB:PA134949693
HOGENOM:HOG000290646 HOVERGEN:HBG053489 GenomeRNAi:64282
NextBio:66196 EMBL:AK300918 IPI:IPI00643763 RefSeq:NP_001035374.2
SMR:B4DV38 STRING:B4DV38 Ensembl:ENST00000436909 UCSC:uc002efz.3
OMA:TYGLNYS Uniprot:B4DV38
Length = 698
Score = 260 (96.6 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 279 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 331
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 332 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 391
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 392 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 451
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 452 SSYGAMQVKQAFDYAYVVLSHAVSPI 477
Score = 109 (43.4 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 201 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 259
Query: 1275 VV 1276
VV
Sbjct: 260 VV 261
Score = 40 (19.1 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 235 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 267
>UNIPROTKB|J9P5I2 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000045316 Uniprot:J9P5I2
Length = 614
Score = 260 (96.6 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 268 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 320
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 321 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 380
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 381 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 440
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 441 SSYGAMQVKQAFDYAYVVLSHAVSPI 466
Score = 109 (43.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 190 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 248
Query: 1275 VV 1276
VV
Sbjct: 249 VV 250
Score = 40 (19.1 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 224 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 256
Score = 38 (18.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 14/53 (26%), Positives = 16/53 (30%)
Query: 520 HQEHARALVAGKGRXXXXXXXXXXXXXXXXXXXXPVPVKDPKVSVLETSSSIS 572
HQ A A A G PVPV P V + +S S
Sbjct: 80 HQPAAWARRAAAGPSASPSPSASPSPSPHSAAAVPVPVPVPAVEPADPASGSS 132
>UNIPROTKB|E1BX86 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 OMA:DNRIKIK EMBL:AADN02007996
EMBL:AADN02007997 EMBL:AADN02007998 EMBL:AADN02007999
EMBL:AADN02008000 EMBL:AADN02008001 EMBL:AADN02008002
IPI:IPI00813219 Ensembl:ENSGALT00000021322 ArrayExpress:E1BX86
Uniprot:E1BX86
Length = 423
Score = 245 (91.3 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 60/174 (34%), Positives = 94/174 (54%)
Query: 1396 TSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSY 1455
T V++DISF TG++ +KE +++ L LVLKQFL R L++ ++GG+SSY
Sbjct: 97 TEVKVDISFNV--ETGVKAARFIKEYMKKYTLLPYLILVLKQFLLQRDLNEVFTGGISSY 154
Query: 1456 CLMLLITRFLQ-HEHHLGRPINQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER 1514
L+L+ FLQ H R ++N G LL++F +G F+ + I ++ G YI +E
Sbjct: 155 SLILMAISFLQLHPRIDARRADENLGMLLIEFFELYGRNFNYLKTGIRIKNGGAYIAKEE 214
Query: 1515 -------GYSIDPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
GY + I+DP P N+VGR+ + Q + F AY +L ++ L
Sbjct: 215 IMKVMTNGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 110 (43.8 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVIKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
Score = 47 (21.6 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHNHVRQPFVPTLHQA-RNH 790
WPT F S S+ L LP +D + L V W +P + L QA R H
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSD-IDLVVFGKWE----RPPLQLLEQALRKH 71
Score = 39 (18.8 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 1321 SLKTVENTAIPIIMLV---VEVPHDLIASAASSVQSPK 1355
S+K ++ +PII L EV D+ + + V++ +
Sbjct: 78 SIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAAR 115
>UNIPROTKB|E2RJX8 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042493 "response to drug" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 GO:GO:0005634 GO:GO:0042493
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
OMA:DNRIKIK EMBL:AAEX03017172 ProteinModelPortal:E2RJX8
Ensembl:ENSCAFT00000016392 Uniprot:E2RJX8
Length = 542
Score = 248 (92.4 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 66/206 (32%), Positives = 105/206 (50%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH+ + LD + P T + T V++DISF TG++ +L+K +
Sbjct: 70 KHNVAEPCSIKVLDKATVPIIKLTDQE-----TEVKVDISFNM--ETGVRAAELIKNYMK 122
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++ L LVLKQFL R L++ ++GG+SSY L+L+ FLQ H R ++N G L
Sbjct: 123 KYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGML 182
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G YI +E GY + I+DP P N+VGR
Sbjct: 183 LVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGR 242
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q + F AY +L ++ L
Sbjct: 243 SSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 109 (43.4 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVVKDLWPAADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
Score = 43 (20.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHNHVRQPFVPTLHQA-RNHPFDGGCN 797
WP F S S+ L LP +D + L V W +P + L QA R H C+
Sbjct: 26 WPAADVQIFGSFSTGLYLPTSD-IDLVVFGKWE----RPPLQLLEQALRKHNVAEPCS 78
>UNIPROTKB|J9P9B2 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
OMA:TYGLNYS EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000046476 Uniprot:J9P9B2
Length = 710
Score = 260 (96.6 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 291 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 343
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 344 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 403
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 404 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 463
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 464 SSYGAMQVKQAFDYAYVVLSHAVSPI 489
Score = 109 (43.4 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 213 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 271
Query: 1275 VV 1276
VV
Sbjct: 272 VV 273
Score = 40 (19.1 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHN 774
WP+ F S + L LP +D + L V W N
Sbjct: 247 WPSADVQIFGSFKTGLYLPTSD-IDLVVFGKWEN 279
Score = 38 (18.4 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 14/53 (26%), Positives = 16/53 (30%)
Query: 520 HQEHARALVAGKGRXXXXXXXXXXXXXXXXXXXXPVPVKDPKVSVLETSSSIS 572
HQ A A A G PVPV P V + +S S
Sbjct: 103 HQPAAWARRAAAGPSASPSPSASPSPSPHSAAAVPVPVPVPAVEPADPASGSS 155
>RGD|1307356 [details] [associations]
symbol:Papd7 "PAP associated domain containing 7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA;ISO] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 RGD:1307356 GO:GO:0005634 GO:GO:0042493
InterPro:IPR002058 KO:K03514 GO:GO:0016779 EMBL:CH474002
GeneTree:ENSGT00400000022055 CTD:11044 OrthoDB:EOG4N04DQ
IPI:IPI00870911 RefSeq:NP_001100803.1 UniGene:Rn.22554
Ensembl:ENSRNOT00000023712 GeneID:306672 KEGG:rno:306672
UCSC:RGD:1307356 NextBio:656405 Uniprot:D3ZSY1
Length = 541
Score = 244 (91.0 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 65/206 (31%), Positives = 104/206 (50%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH+ + LD + P T + T V++DISF TG++ + +K +
Sbjct: 70 KHNVAEPCSIKVLDKATVPIIKLTDQE-----TEVKVDISFNM--ETGVRAAEFIKNYMK 122
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++ L LVLKQFL R L++ ++GG+SSY L+L+ FLQ H R ++N G L
Sbjct: 123 KYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGML 182
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G YI +E GY + I+DP P N+VGR
Sbjct: 183 LVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGR 242
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q + F AY +L ++ L
Sbjct: 243 SSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 109 (43.4 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVVKDLWPSADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
>UNIPROTKB|Q5XG87 [details] [associations]
symbol:PAPD7 "DNA polymerase sigma" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=NAS] [GO:0007062 "sister
chromatid cohesion" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043221 "SMC family protein binding"
evidence=TAS] [GO:0042493 "response to drug" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 GO:GO:0005634
GO:GO:0051301 GO:GO:0042493 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006302 GO:GO:0007076 EMBL:CH471102
GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0007062 HOGENOM:HOG000290646 EMBL:AF089896 EMBL:AB005754
EMBL:AY623114 EMBL:AK289857 EMBL:BC084567 EMBL:BC117137
EMBL:BC126106 IPI:IPI00418630 RefSeq:NP_001165276.1
RefSeq:NP_001165277.1 RefSeq:NP_008930.1 UniGene:Hs.481542
ProteinModelPortal:Q5XG87 SMR:Q5XG87 STRING:Q5XG87
PhosphoSite:Q5XG87 DMDM:60392922 PaxDb:Q5XG87 PRIDE:Q5XG87
DNASU:11044 Ensembl:ENST00000230859 GeneID:11044 KEGG:hsa:11044
UCSC:uc003jdx.1 CTD:11044 GeneCards:GC05P006714 HGNC:HGNC:16705
HPA:HPA045487 HPA:HPA046742 MIM:605198 neXtProt:NX_Q5XG87
PharmGKB:PA33523 HOVERGEN:HBG053636 InParanoid:Q5XG87 OMA:DNRIKIK
OrthoDB:EOG4N04DQ PhylomeDB:Q5XG87 ChiTaRS:PAPD7 GenomeRNAi:11044
NextBio:41972 ArrayExpress:Q5XG87 Bgee:Q5XG87 CleanEx:HS_POLS
Genevestigator:Q5XG87 GermOnline:ENSG00000112941 GO:GO:0043221
Uniprot:Q5XG87
Length = 542
Score = 244 (91.0 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 65/206 (31%), Positives = 104/206 (50%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH+ + LD + P T + T V++DISF TG++ + +K +
Sbjct: 70 KHNVAEPCSIKVLDKATVPIIKLTDQE-----TEVKVDISFNM--ETGVRAAEFIKNYMK 122
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++ L LVLKQFL R L++ ++GG+SSY L+L+ FLQ H R ++N G L
Sbjct: 123 KYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGML 182
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G YI +E GY + I+DP P N+VGR
Sbjct: 183 LVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGR 242
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q + F AY +L ++ L
Sbjct: 243 SSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 109 (43.4 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
>MGI|MGI:2682295 [details] [associations]
symbol:Papd7 "PAP associated domain containing 7"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 MGI:MGI:2682295 Pfam:PF03828
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 eggNOG:COG5260
InterPro:IPR002058 KO:K03514 HOGENOM:HOG000290646 CTD:11044
HOVERGEN:HBG053636 OrthoDB:EOG4N04DQ ChiTaRS:PAPD7 EMBL:BC059846
IPI:IPI00387593 RefSeq:NP_941002.2 UniGene:Mm.315959
ProteinModelPortal:Q6PB75 SMR:Q6PB75 STRING:Q6PB75
PhosphoSite:Q6PB75 PRIDE:Q6PB75 GeneID:210106 KEGG:mmu:210106
UCSC:uc007rch.2 InParanoid:Q6PB75 NextBio:372866 CleanEx:MM_POLS
Genevestigator:Q6PB75 GermOnline:ENSMUSG00000034575 Uniprot:Q6PB75
Length = 542
Score = 244 (91.0 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 65/206 (31%), Positives = 104/206 (50%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH+ + LD + P T + T V++DISF TG++ + +K +
Sbjct: 70 KHNVAEPCSIKVLDKATVPIIKLTDQE-----TEVKVDISFNM--ETGVRAAEFIKNYMK 122
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++ L LVLKQFL R L++ ++GG+SSY L+L+ FLQ H R ++N G L
Sbjct: 123 KYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGML 182
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G YI +E GY + I+DP P N+VGR
Sbjct: 183 LVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGR 242
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q + F AY +L ++ L
Sbjct: 243 SSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 109 (43.4 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
>ZFIN|ZDB-GENE-041021-1 [details] [associations]
symbol:papd7 "PAP associated domain containing 7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 ZFIN:ZDB-GENE-041021-1 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 EMBL:BX511155
IPI:IPI00490581 Ensembl:ENSDART00000089425 Bgee:F1Q7F1
Uniprot:F1Q7F1
Length = 762
Score = 250 (93.1 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 68/216 (31%), Positives = 105/216 (48%)
Query: 1354 PKEDAAHTTLKHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQ 1413
P + KH + LD + P T + T V++DISF TG++
Sbjct: 300 PLQQLEQALRKHSVAEPYSIKVLDKATVPIIKLTDQE-----TEVKVDISFNV--ETGIK 352
Query: 1414 TTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLG 1472
+KE +++ L VLKQFL R L++ ++GG+SSY L+L++ FLQ H
Sbjct: 353 AASFIKEYVKKYTVLPYLIFVLKQFLLQRDLNEVFTGGISSYSLILMVISFLQLHPRIDT 412
Query: 1473 RPINQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRE-------RGYSIDPIHIDD 1525
R N N G LL++F +G F+ + I ++ G Y+ +E GY + I+D
Sbjct: 413 RNPNMNLGILLIEFFELYGRHFNYLKTGIRIKNGGAYMAKEDIMKAMSNGYRPSMLCIED 472
Query: 1526 PRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
P P N+VGR+ + Q +AF AY IL ++ L
Sbjct: 473 PLLPGNDVGRSSYGAMQVKEAFDYAYIILSHAVSPL 508
Score = 108 (43.1 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
V R+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 255 VDRIESVIKELWPTADVQIFGSFSTGLFLPTSDIDLVVFGKWEKPPLQQLE 305
Score = 47 (21.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHNHVRQPFVPTLHQA-RNH 790
WPT F S S+ L LP +D + L V W +P + L QA R H
Sbjct: 266 WPTADVQIFGSFSTGLFLPTSD-IDLVVFGKWE----KPPLQQLEQALRKH 311
>UNIPROTKB|E1BEH2 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042493 "response to drug" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:DNRIKIK
EMBL:DAAA02051298 IPI:IPI00706336 UniGene:Bt.6221
Ensembl:ENSBTAT00000004384 Uniprot:E1BEH2
Length = 541
Score = 245 (91.3 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 65/206 (31%), Positives = 104/206 (50%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH+ + LD + P T + T V++DISF TG++ + +K +
Sbjct: 70 KHNVAEPGSIKVLDKATVPIIKLTDQE-----TEVKVDISFNM--ETGVRAAEFIKNYMK 122
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++ L LVLKQFL R L++ ++GG+SSY L+L+ FLQ H R ++N G L
Sbjct: 123 KYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGML 182
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G YI +E GY + I+DP P N+VGR
Sbjct: 183 LVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGR 242
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q + F AY +L ++ L
Sbjct: 243 SSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 106 (42.4 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
V+R+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VRRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
Score = 47 (21.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 742 WPTIAPVYFPSISSHL-LPATDRLHLDVGHNWHNHVRQPFVPTLHQA-RNH 790
WPT F S S+ L LP +D + L V W +P + L QA R H
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSD-IDLVVFGKWE----RPPLQLLEQALRKH 71
>FB|FBgn0030049 [details] [associations]
symbol:Trf4-1 species:7227 "Drosophila melanogaster"
[GO:0003916 "DNA topoisomerase activity" evidence=ISS] [GO:0007062
"sister chromatid cohesion" evidence=NAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=NAS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=IMP] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AE014298 GO:GO:0016853 GO:GO:0043630
GO:GO:0003887 GO:GO:0004652 InterPro:IPR002058 KO:K03514
GO:GO:0007062 GeneTree:ENSGT00400000022055 UniGene:Dm.18620
GeneID:31795 KEGG:dme:Dmel_CG11265 CTD:31795 FlyBase:FBgn0030049
GenomeRNAi:31795 NextBio:775336 EMBL:BT010282 RefSeq:NP_996381.1
RefSeq:NP_996382.2 SMR:Q7KVS9 EnsemblMetazoa:FBtr0071212
EnsemblMetazoa:FBtr0071213 EnsemblMetazoa:FBtr0331723
EnsemblMetazoa:FBtr0331724 EnsemblMetazoa:FBtr0331725
UCSC:CG11265-RC InParanoid:Q7KVS9 OMA:MKIGISI Uniprot:Q7KVS9
Length = 1001
Score = 245 (91.3 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 59/174 (33%), Positives = 98/174 (56%)
Query: 1396 TSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSY 1455
T V++DISF S G+Q+ +L+K+ +P L LVLKQFL R L++ ++GG+SSY
Sbjct: 378 TQVKVDISFNMQS--GVQSAELIKKFKRDYPVLEKLVLVLKQFLLLRDLNEVFTGGISSY 435
Query: 1456 CLMLLITRFLQ-HEHHLGRPINQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER 1514
L+L+ FLQ H + N G LL++F +G F+ ++ IS++ G Y+ ++
Sbjct: 436 SLILMCISFLQMHPRGIYHD-TANLGVLLLEFFELYGRRFNYMKIGISIKNGGRYMPKDE 494
Query: 1515 -------GYSIDPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
G+ + I+DP P N++GR+ + + Q +AF AY +L ++ L
Sbjct: 495 LQRDMVDGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYRVLALAVSPL 548
Score = 115 (45.5 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 33/85 (38%), Positives = 44/85 (51%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI+ F + V N VKR+ + +WP++ IFGS TGL LP+SD+DL
Sbjct: 273 EEIEHFYQYVLP-TPCEHAIRNEVVKRIEAVVHSIWPQAVVEIFGSFRTGLFLPTSDIDL 331
Query: 1275 VVC----LPPVRNLE-PIKEAGILE 1294
VV P+R LE + GI E
Sbjct: 332 VVLGLWEKLPLRTLEFELVSRGIAE 356
>UNIPROTKB|F1S0S9 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042493 "response to drug" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:DNRIKIK
EMBL:CU856020 Ensembl:ENSSSCT00000018620 Uniprot:F1S0S9
Length = 541
Score = 243 (90.6 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 59/174 (33%), Positives = 94/174 (54%)
Query: 1396 TSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSY 1455
T V++DISF TG++ + +K +++ L LVLKQFL R L++ ++GG+SSY
Sbjct: 97 TEVKVDISFNM--ETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSY 154
Query: 1456 CLMLLITRFLQ-HEHHLGRPINQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER 1514
L+L+ FLQ H R ++N G LL++F +G F+ + I ++ G YI +E
Sbjct: 155 SLILMAISFLQLHPRIDARRADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEE 214
Query: 1515 -------GYSIDPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
GY + I+DP P N+VGR+ + Q + F AY +L ++ L
Sbjct: 215 IMKAMTSGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPL 268
Score = 111 (44.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVC----LPPVRNLE 1285
VKR+ ++ LWP + IFGS +TGL LP+SD+DLVV PP++ LE
Sbjct: 15 VKRIETVVKDLWPTAEVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLE 65
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 1304 LQHAARYLANQEWVKSDSLKTVENTAIPIIMLV---VEVPHDLIASAASSVQS 1353
LQ + L + + S+K ++ +PII L EV D+ + + V++
Sbjct: 61 LQLLEQALRKHKVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRA 113
>UNIPROTKB|F1MNP2 [details] [associations]
symbol:F1MNP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
EMBL:DAAA02046385 IPI:IPI00698517 Ensembl:ENSBTAT00000010440
Uniprot:F1MNP2
Length = 460
Score = 260 (96.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 67/206 (32%), Positives = 106/206 (51%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 41 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 93
Query: 1424 QFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLMLLITRFLQ-HEHHLGRPINQNYGRL 1482
++P L LVLKQFL R L++ ++GG+ SY L L+ FLQ H N NYG L
Sbjct: 94 KYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACIPNTNYGVL 153
Query: 1483 LMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRFPTNNVGR 1535
L++F +G F+ + I ++ G Y+ ++ GY ++I+DP P N+VGR
Sbjct: 154 LIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGNDVGR 213
Query: 1536 NCFRIHQCIKAFSDAYSILESELTSL 1561
+ + Q +AF AY +L ++ +
Sbjct: 214 SSYGAMQVKQAFDYAYVVLSHAVSPI 239
Score = 73 (30.8 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 1254 RTNIFGSNATGLSLPSSDVDLVV 1276
+ IFGS TGL LP+SD+DLVV
Sbjct: 1 QVQIFGSFKTGLYLPTSDIDLVV 23
>FB|FBgn0039251 [details] [associations]
symbol:Trf4-2 species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS;NAS] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 EMBL:AE014297 GO:GO:0003887
eggNOG:COG5260 InterPro:IPR002058 KO:K03514 GO:GO:0007062
GeneTree:ENSGT00400000022055 OrthoDB:EOG4DV42F EMBL:AY119052
RefSeq:NP_651313.1 UniGene:Dm.10309 SMR:Q9VC07 MINT:MINT-774233
EnsemblMetazoa:FBtr0084718 GeneID:42983 KEGG:dme:Dmel_CG17462
UCSC:CG17462-RA CTD:42983 FlyBase:FBgn0039251 InParanoid:Q9VC07
OMA:SFRTGLN GenomeRNAi:42983 NextBio:831646 Uniprot:Q9VC07
Length = 407
Score = 225 (84.3 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 64/191 (33%), Positives = 102/191 (53%)
Query: 1372 DMVALDDSAS-PKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTP 1430
D V + D AS P T D I + +R D++F S + +G+Q DL+K+ FP
Sbjct: 116 DTVTVLDKASVPVVKFT--DLI---SRIRFDVTFNSVA-SGVQAADLIKDFIRHFPELPK 169
Query: 1431 LALVLKQFLADRSLDQSY-SGGLSSYCLMLLITRFLQHEHHLGRPINQN--YGRLLMDFL 1487
L +VLKQFL+ ++ Y SGG+SSY L L++ FLQ R ++++ LL+ FL
Sbjct: 170 LVMVLKQFLSLHGFNEVYNSGGVSSYALTLMVISFLQQHARSNRRLSEHSKLALLLIQFL 229
Query: 1488 YFFGNVFDPRQMRISVQGSGVYIKRERGYSI-------DPIHIDDPRFPTNNVGRNCFRI 1540
++G FD + ISV G G +++ R S + I+DP PTN++GR+ + +
Sbjct: 230 DYYGRKFDFFKYGISVLGQGGCVEKARLRSTLGENNWQSVLCIEDPVTPTNDIGRSSYGV 289
Query: 1541 HQCIKAFSDAY 1551
++ F A+
Sbjct: 290 LGVMQGFGAAF 300
Score = 102 (41.0 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 1238 AVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVV 1276
AV+R+ + +WP + ++FGS TGL+LP SD+DLVV
Sbjct: 52 AVRRIEDVVLSIWPSASVDLFGSFRTGLNLPDSDIDLVV 90
>TAIR|locus:2164047 [details] [associations]
symbol:AT5G53770 "AT5G53770" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009688 "abscisic acid
biosynthetic process" evidence=RCA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:CP002688 eggNOG:COG5260 InterPro:IPR002058
KO:K03514 GO:GO:0016779 EMBL:BT002764 IPI:IPI00522291
RefSeq:NP_568798.1 UniGene:At.6981 ProteinModelPortal:Q84WU1
SMR:Q84WU1 PaxDb:Q84WU1 PRIDE:Q84WU1 EnsemblPlants:AT5G53770.1
GeneID:835458 KEGG:ath:AT5G53770 TAIR:At5g53770 InParanoid:Q84WU1
OMA:FFDFYGR PhylomeDB:Q84WU1 ProtClustDB:CLSN2690011
ArrayExpress:Q84WU1 Genevestigator:Q84WU1 Uniprot:Q84WU1
Length = 530
Score = 212 (79.7 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 55/180 (30%), Positives = 95/180 (52%)
Query: 1392 IKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGG 1451
++ +++ D+SF + G + + +++ + P PL L+LK FL R L++ YSGG
Sbjct: 225 VEKKSNIAFDLSFDMEN--GPKAAEFIQDAVSKLPPLRPLCLILKVFLQQRELNEVYSGG 282
Query: 1452 LSSYCLMLLITRFLQHEHHLGRPINQ-NYGRLLMDFLYFFGNVFDPRQMRISVQ-GSGVY 1509
+ SY L+ ++ FL++ GR + N G LL+ F F+G + + IS + G +
Sbjct: 283 IGSYALLAMLIAFLKYLKD-GRSAPEHNLGVLLVKFFDFYGRKLNTADVGISCKMGGSFF 341
Query: 1510 IKRERGY--SIDP--IHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESE--LTSLTP 1563
K +G+ P I I+DP+ P N++G++ F Q AF+ A S L + + SL P
Sbjct: 342 SKYNKGFLNRARPSLISIEDPQTPENDIGKSSFNYFQIRSAFAMALSTLTNTKAILSLGP 401
Score = 109 (43.4 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
+EI FC A K + AV+ V+ ++ +WP + +FGS TGL LP+SD+D+
Sbjct: 123 KEIVDFC-DFLLPTQAEKAERDAAVESVSSVIKYIWPSCKVEVFGSYKTGLYLPTSDIDV 181
Query: 1275 VV 1276
V+
Sbjct: 182 VI 183
Score = 37 (18.1 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 736 ECPSYEWPTIAPVYFPSISSHLLPATDRLH 765
E P++ + T+ P+ F + P + H
Sbjct: 9 EAPAFVYDTLPPLSFSDSNQSPPPTHEESH 38
>ASPGD|ASPL0000029878 [details] [associations]
symbol:cutB species:162425 "Emericella nidulans"
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0007000
"nucleolus organization" evidence=IEA] [GO:0016075 "rRNA catabolic
process" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:0006402 "mRNA catabolic process" evidence=IMP]
[GO:0031087 "deadenylation-independent decapping of
nuclear-transcribed mRNA" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 GO:GO:0016853
EMBL:AACD01000098 EMBL:BN001305 eggNOG:COG5260 InterPro:IPR002058
KO:K03514 GO:GO:0016779 RefSeq:XP_663298.1
ProteinModelPortal:Q5B186 STRING:Q5B186
EnsemblFungi:CADANIAT00003371 GeneID:2871984 KEGG:ani:AN5694.2
HOGENOM:HOG000180073 OMA:KWSNPDP OrthoDB:EOG447K2J Uniprot:Q5B186
Length = 694
Score = 213 (80.0 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 55/169 (32%), Positives = 88/169 (52%)
Query: 1396 TSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSY 1455
T +++D+SF + S GL ++ ++PA + V+KQFL R L++ + GL +
Sbjct: 373 TGLKVDLSFDNDS--GLIANRTFQQWKSEYPAMPVIVSVIKQFLLLRGLNEVPTLGLGGF 430
Query: 1456 CLMLLITRFLQHEHHLGRPINQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRERG 1515
+ L+T LQH H G + N G +LMDF F+GN FD + I + G + KR G
Sbjct: 431 SITCLVTSLLQHMPH-GN-LYPNLGSVLMDFFQFYGNNFDYETVGIRMNPPGYFNKRVYG 488
Query: 1516 -YSIDP---IHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTS 1560
Y + + I+DP P N++ I K+F+DA+ +L+ L S
Sbjct: 489 VYKANNGARLSIEDPNNPDNDISGGTREIALIFKSFADAFRLLKDRLVS 537
Score = 87 (35.7 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 1215 EEIDSF---CKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSD 1271
+EI SF K V E+ R+ V R+ + Q + + FGS A+GL LP++D
Sbjct: 257 DEILSFYHWVKPVRYEHIVRQDL----VARLQAAFQSRYYGVEIHAFGSFASGLYLPNAD 312
Query: 1272 VDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWVKSDSLKTVENTAIP 1331
+DLV+ R +K G +G+ + + +L NQ S++T+ + +P
Sbjct: 313 IDLVLLSTSFRRTG-VKTFGERKGQ-------IYAFSAFLKNQNIAVPGSVETIAHARVP 364
Query: 1332 IIMLV 1336
I+ V
Sbjct: 365 ILKFV 369
>DICTYBASE|DDB_G0274847 [details] [associations]
symbol:DDB_G0274847 "nucleotidyltransferase
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0274847 Pfam:PF03828
EMBL:AAFI02000012 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_644037.1 ProteinModelPortal:Q555M9
EnsemblProtists:DDB0305227 GeneID:8619467 KEGG:ddi:DDB_G0274847
InParanoid:Q555M9 OMA:ANSTCEQ Uniprot:Q555M9
Length = 1880
Score = 177 (67.4 bits), Expect = 2.8e-16, Sum P(6) = 2.8e-16
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 1392 IKAATS--VRLDISFK-SPS--HTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQ 1446
IK T+ + +DISF+ SP+ HTG+ DLV + + PLA+VLK FL +R L+
Sbjct: 1582 IKLVTTENISVDISFRESPTSVHTGIAARDLVADCVREIIGLYPLAIVLKWFLRERGLNN 1641
Query: 1447 SYSGGLSSYCLMLLITRFLQHEHH 1470
+Y+GGLSSYCL+L++ FL++ H
Sbjct: 1642 TYTGGLSSYCLVLMLISFLKNNEH 1665
Score = 85 (35.0 bits), Expect = 2.8e-16, Sum P(6) = 2.8e-16
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
+EI F V + + + ++ LW + +I+GS TGL LPSSD+D+
Sbjct: 1475 QEILDFVSDVGERTYPHVQSCHHVIGLIRSVVKKLWSNADLDIYGSFMTGLWLPSSDIDI 1534
Query: 1275 VV 1276
VV
Sbjct: 1535 VV 1536
Score = 80 (33.2 bits), Expect = 2.8e-16, Sum P(6) = 2.8e-16
Identities = 34/145 (23%), Positives = 63/145 (43%)
Query: 165 LDTFTVSVEFVENVDRFIDIMDEISNGGFLRGE---ESELAGDWVEFD--WLKAKGYYSI 219
LDTFT+ V N + + ++ E+S GGFL+ + +W W +K ++S+
Sbjct: 275 LDTFTIESNSVSNQE-LVHLLTELSQGGFLQVPCHLIKDSQNNWRSEPPKWFISKSFFSL 333
Query: 220 EAFIVNRLEVGLRLA--WLNCNNGKKRGVKLKEKLNAAGMAANVYWRKKGCVDWW---MN 274
F+ E L A W N ++ K++ N + + RK ++W M
Sbjct: 334 GEFVAAWFE-SLIWAQFWENHRIDGRKDQSSKQR-NPKPIFKLLDSRKSNLKEFWSKQMT 391
Query: 275 LDDAMRRKVLTVILGKAAKSLTHEV 299
+D+ R++ +G S+ H +
Sbjct: 392 IDN--RKRYAMAKMGNLLLSVIHSL 414
Score = 61 (26.5 bits), Expect = 2.8e-16, Sum P(6) = 2.8e-16
Identities = 34/139 (24%), Positives = 62/139 (44%)
Query: 563 SVLETSSSISLQDEVEKYDKLSAQNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQST 622
S+ ET + L D +EK +L ++ +T ++++SN ++ TS + P I+T +T
Sbjct: 413 SLNETPEKVDL-DFIEKLGEL-IEDFKSPTTTSPSIISSNTTTPTSTT-PTTS-ISTTTT 468
Query: 623 QEDCVVNSVNSECRRFSNGRIDNQTQHFLQETTDSKVECNIISPDMPARDLDNAFGNSIS 682
++ NS +N +N + T + + ++ P + R N N+ S
Sbjct: 469 TTTTTSSNNNS-----NN---NNNNNNISSSTPTTPITVSVDKPKLIQRSTTNRNTNNQS 520
Query: 683 GINFQNSFHESETGAISVL 701
QN H S G + VL
Sbjct: 521 Q---QN--HVSVGGKLGVL 534
Score = 56 (24.8 bits), Expect = 7.7e-12, Sum P(6) = 7.7e-12
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 584 SAQNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQSTQEDCVVNSVNSECRRFSNGRI 643
S N+ +NST +N+ N SS +S++ I +T + S+NS C S+ ++
Sbjct: 143 STSNIINNNST-NNI---NNSSSSSSNNNNNNSINGSNTPNN---TSINSNCSSNSSSKL 195
Query: 644 DNQTQH 649
++ H
Sbjct: 196 KSKKSH 201
Score = 52 (23.4 bits), Expect = 2.8e-16, Sum P(6) = 2.8e-16
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 1478 NYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRERGYSIDPIHIDDP---RFPTNNVG 1534
N G LM FL ++G + + Q +G+ I E G PI+ DDP +F NN
Sbjct: 1732 NIGCALMRFLEYYG-------VNFNYQVTGISI--EEGLYTFPINKDDPVGSQFLFNNYN 1782
Query: 1535 RN 1536
N
Sbjct: 1783 IN 1784
Score = 50 (22.7 bits), Expect = 9.9e-15, Sum P(6) = 9.9e-15
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 554 PVPVKDPKVSVLETSSSISLQDEVEKYDKLSAQNVS---VDNSTCSNVLASNQSSCTSAS 610
P P+ PK L + ++S + + +S+ N S +N+ SN + +N S+ T+ +
Sbjct: 1190 PQPLS-PKNGSLSPAGNVSSKRLFFENQTISSGNTSPKITNNNNNSNNINNNNSTTTTTT 1248
Query: 611 VPAREGIATQSTQEDCVVNSVNSECRRFSNGRIDNQTQH 649
+ Q + +N+ + R +N + +N +
Sbjct: 1249 TTNNNNPIATNIQSN--INNNEKDKERDNNQKNNNNNNN 1285
Score = 45 (20.9 bits), Expect = 2.6e-15, Sum P(7) = 2.6e-15
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1523 IDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILES 1556
+ DP P NV F + AF A++ L +
Sbjct: 1818 VSDPFVPGRNVAAGSFNFSRVKAAFQYAFATLSN 1851
Score = 44 (20.5 bits), Expect = 4.5e-12, Sum P(7) = 4.5e-12
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 1236 NWAVKRVTRS--LQVLWPRSRTNIFGSNATGLSLPSSDVDLV 1275
N A+K L+VL + RT++ G T L +PS+ + ++
Sbjct: 1541 NMAIKPKNAQFLLKVLEKQFRTDLNGMILTMLCIPSAKIPVI 1582
Score = 43 (20.2 bits), Expect = 2.8e-16, Sum P(6) = 2.8e-16
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 822 PSVTCNYDSGFISSRQSGF--QQNFATKGMQFNA--KTSDDEG-K----CSGDFMDLPEP 872
P+VT N + R Q++ +K + A TSD +G K S +F + E
Sbjct: 961 PTVTKNRANSTCEQRTPLILTQKSLTSKSLNNIAVTSTSDSDGIKPKFIYSEEFEEDDED 1020
Query: 873 TTTQEQGDECDSHWLSEEE 891
+ E+ DE D S+EE
Sbjct: 1021 EGSDEESDEDDEDEESDEE 1039
Score = 42 (19.8 bits), Expect = 5.5e-16, Sum P(7) = 5.5e-16
Identities = 21/68 (30%), Positives = 30/68 (44%)
Query: 769 GHNWHNHVRQPFVPTLHQARNHPFDGGCNQILSQPLPMSL--DWPPMVQNVSGIAPSVTC 826
GH+ HNH Q A + D I ++P SL D PP ++N GI P ++
Sbjct: 762 GHHHHNH-HQSNQGEKSSANS---DTEQESIQTRPRRHSLPMDTPPTIKN--GI-PFLST 814
Query: 827 NYDSGFIS 834
D +S
Sbjct: 815 TEDEDGVS 822
Score = 41 (19.5 bits), Expect = 5.7e-14, Sum P(7) = 5.7e-14
Identities = 7/38 (18%), Positives = 23/38 (60%)
Query: 585 AQNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQST 622
++N+S +ST ++ +N ++ +++S +++ +T
Sbjct: 886 SRNISTSSSTSTSTSTNNTNNNSNSSTIGGNSLSSSTT 923
Score = 40 (19.1 bits), Expect = 5.4e-16, Sum P(6) = 5.4e-16
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1000 SSSTTTDVATEEEISGSFASLSGDVDSKALD 1030
S +TTT T S S ++ G SK L+
Sbjct: 671 SPTTTTTTTTTTANSNSLSNSGGGNSSKKLN 701
Score = 40 (19.1 bits), Expect = 5.5e-16, Sum P(7) = 5.5e-16
Identities = 14/70 (20%), Positives = 27/70 (38%)
Query: 1000 SSSTTTDVATEEEISGSFASLSGDVDSKALDTXXXXXXXXXXXXXXSRERSRSDFKRSHE 1059
SSST+T +T + S +S G +S + T ++ ++ +
Sbjct: 892 SSSTSTSTSTNNTNNNSNSSTIGG-NSLSSSTTGTSQPLSNITTTKPKQNGKTGTNKKGN 950
Query: 1060 HKSPCVPPSR 1069
KS P++
Sbjct: 951 SKSSSSTPTK 960
Score = 38 (18.4 bits), Expect = 9.9e-15, Sum P(6) = 9.9e-15
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 386 IEKIFFSSLRFVSTTTDCLLRKL 408
IE + FS L +T D ++R++
Sbjct: 566 IEFLCFSPLERAGSTVDTVMRQI 588
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(7) = 1.1e-13
Identities = 24/117 (20%), Positives = 42/117 (35%)
Query: 629 NSVNSECRRFSNGRIDNQTQHFLQETTDSKVECNIISPDMPARDLDNAFGNSISGINFQN 688
N+ N+ +N +N + +++ + S + +N NS S N
Sbjct: 857 NNNNNNNNNNNNNNNNNNNNNNSNHSSNKSRNISTSSSTSTSTSTNNTNNNSNSSTIGGN 916
Query: 689 SFHESETGAISVLPDKGIEALEIKKESAVTQDQRNESFFGTALKSSLECPSYEWPTI 745
S S TG P I + K+ +++ S KSS P+ PT+
Sbjct: 917 SLSSSTTGTSQ--PLSNITTTKPKQNGKTGTNKKGNS------KSSSSTPTK--PTV 963
>SGD|S000005243 [details] [associations]
symbol:TRF5 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IDA]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0043629 "ncRNA polyadenylation" evidence=IGI]
[GO:0034475 "U4 snRNA 3'-end processing" evidence=IGI;IMP]
[GO:0007067 "mitosis" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
[GO:0071037 "nuclear polyadenylation-dependent snRNA catabolic
process" evidence=IGI] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IGI] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] [GO:0071050 "snoRNA polyadenylation" evidence=IGI]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IGI] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;ISS;IMP;IDA] [GO:0007049
"cell cycle" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
SGD:S000005243 Pfam:PF03828 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 EMBL:BK006947 GO:GO:0031499
GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
GO:GO:0071038 GO:GO:0071044 EMBL:U23084 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 OrthoDB:EOG43BQXK GO:GO:0071042
GO:GO:0071051 GeneTree:ENSGT00400000022055 GO:GO:0034475
HOGENOM:HOG000246586 GO:GO:0071050 EMBL:U47282 EMBL:Z71575
PIR:S60401 RefSeq:NP_014100.2 ProteinModelPortal:P48561 SMR:P48561
IntAct:P48561 MINT:MINT-1776475 STRING:P48561 EnsemblFungi:YNL299W
GeneID:855417 KEGG:sce:YNL299W KO:K12596 OMA:DFNDERD NextBio:979271
Genevestigator:P48561 GermOnline:YNL299W Uniprot:P48561
Length = 642
Score = 205 (77.2 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 54/183 (29%), Positives = 90/183 (49%)
Query: 1392 IKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGG 1451
I+ + + +D+SF+ + GL+ L++E P L L++KQFL R L+ ++GG
Sbjct: 281 IEPQSQLHIDVSFERTN--GLEAAKLIREWLRDSPGLRELVLIIKQFLHSRRLNNVHTGG 338
Query: 1452 LSSYCLMLLITRFLQ-HEHHLGRPIN--QNYGRLLMDFLYFFGNVFDPRQMRISVQ-GSG 1507
L + ++ L+ FL H I+ N G LL+DF +G F + IS+ G
Sbjct: 339 LGGFTVICLVYSFLNMHPRIKSNDIDVLDNLGVLLIDFFELYGKNFGYDDVAISISDGYA 398
Query: 1508 VYIKRERGYSIDP------IHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
YI + +++P + I DP P NN+ R F + KAF+ A+ +L ++ L
Sbjct: 399 SYIPKSCWRTLEPSRSKFSLAIQDPGDPNNNISRGSFNMKDIKKAFAGAFELLVNKCWEL 458
Query: 1562 TPA 1564
A
Sbjct: 459 NSA 461
Score = 88 (36.0 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1216 EIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLV 1275
EI F ++ K N + ++ R+++ LW + ++FGS AT L LP SD+D V
Sbjct: 179 EIKDFVHYISPSKNEIKCR-NRTIDKLRRAVKELWSDADLHVFGSFATDLYLPGSDIDCV 237
Query: 1276 V 1276
V
Sbjct: 238 V 238
Score = 38 (18.4 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 1337 VEVPHDLIASAASSVQSPKEDAAHTTLKHDNHVHSDMVALDDSASPKCSHTSSDNIKAAT 1396
+E D IA + SS ED +K D+ S + D+ K + S N ++A
Sbjct: 101 LEDNQDFIAFSDSS-----EDETEQ-IKEDDDERSSFLLTDEHEVSKLTSQQSLNTESAC 154
Query: 1397 SV 1398
+V
Sbjct: 155 NV 156
Score = 37 (18.1 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 625 DCVVNSVNSE 634
DCVVNS N +
Sbjct: 235 DCVVNSRNRD 244
>SGD|S000005475 [details] [associations]
symbol:PAP2 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process"
evidence=IGI;IDA;IMP] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IGI;IMP]
[GO:0051575 "5'-deoxyribose-5-phosphate lyase activity"
evidence=IDA;IMP] [GO:0006284 "base-excision repair"
evidence=IGI;IMP] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI;ISS;IMP;IDA] [GO:0043629 "ncRNA polyadenylation"
evidence=IGI;IMP;IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0071037
"nuclear polyadenylation-dependent snRNA catabolic process"
evidence=IMP] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process"
evidence=IGI;IMP] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end
processing" evidence=IGI] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IGI]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0071047 "polyadenylation-dependent mRNA catabolic
process" evidence=IMP] [GO:0071040 "nuclear
polyadenylation-dependent antisense transcript catabolic process"
evidence=IMP] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] InterPro:IPR002934 Pfam:PF01909 SGD:S000005475
Pfam:PF03828 GO:GO:0005730 EMBL:BK006948 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0006284 GO:GO:0006400
GO:GO:0031499 GO:GO:0071031 GO:GO:0071039 GO:GO:0071035
GO:GO:0071036 GO:GO:0071037 GO:GO:0071038 PDB:3NYB PDBsum:3NYB
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
KO:K03514 OrthoDB:EOG43BQXK EMBL:Z48149 GO:GO:0071042 GO:GO:0071051
GO:GO:0051575 GeneTree:ENSGT00400000022055 GO:GO:0034475
EMBL:U31355 EMBL:Z74857 EMBL:AY723865 PIR:S51882 RefSeq:NP_014526.1
ProteinModelPortal:P53632 SMR:P53632 DIP:DIP-4214N IntAct:P53632
MINT:MINT-500696 STRING:P53632 PaxDb:P53632 EnsemblFungi:YOL115W
GeneID:854034 KEGG:sce:YOL115W CYGD:YOL115w HOGENOM:HOG000246586
OMA:LHVFGSY EvolutionaryTrace:P53632 NextBio:975589
Genevestigator:P53632 GermOnline:YOL115W GO:GO:0071040
GO:GO:0071050 Uniprot:P53632
Length = 584
Score = 195 (73.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 55/187 (29%), Positives = 92/187 (49%)
Query: 1392 IKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGG 1451
++ + + +D+SF+ + G++ L++E + P L L++KQFL R L+ ++GG
Sbjct: 284 VEPHSGIHIDVSFERTN--GIEAAKLIREWLDDTPGLRELVLIVKQFLHARRLNNVHTGG 341
Query: 1452 LSSYCLMLLITRFLQ-HEHHLGRPIN--QNYGRLLMDFLYFFGNVFDPRQMRI-SVQGSG 1507
L + ++ L+ FL H + I+ N G LL++F +G F + + S G
Sbjct: 342 LGGFSIICLVFSFLHMHPRIITNEIDPKDNLGVLLIEFFELYGKNFGYDDVALGSSDGYP 401
Query: 1508 VYIKRERGYSIDPIH------IDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILES---EL 1558
VY + +I PI I DP +NN+ R F I KAF+ A+ +L + EL
Sbjct: 402 VYFPKSTWSAIQPIKNPFSLAIQDPGDESNNISRGSFNIRDIKKAFAGAFDLLTNRCFEL 461
Query: 1559 TSLTPAD 1565
S T D
Sbjct: 462 HSATFKD 468
Score = 89 (36.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1236 NWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVV 1276
N + + +++ LWP + ++FGS +T L LP SD+D VV
Sbjct: 201 NQTISTIREAVKQLWPDADLHVFGSYSTDLYLPGSDIDCVV 241
>POMBASE|SPAC12G12.13c [details] [associations]
symbol:cid14 "poly(A) polymerase Cid14" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0007000 "nucleolus organization" evidence=IMP] [GO:0016075
"rRNA catabolic process" evidence=IGI] [GO:0016077 "snoRNA
catabolic process" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031125 "rRNA 3'-end processing"
evidence=IGI] [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630
"ncRNA polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0065007 "biological regulation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC12G12.13c Pfam:PF03828
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006397
GO:GO:0003723 GO:GO:0031499 GO:GO:0043630 GO:GO:0016075
GO:GO:0016077 GO:GO:0016078 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 PIR:S62544 RefSeq:NP_001018181.1
ProteinModelPortal:Q9UTN3 STRING:Q9UTN3
EnsemblFungi:SPAC12G12.13c.1 GeneID:3361384 KEGG:spo:SPAC12G12.13c
KO:K03514 OMA:LISHEEE OrthoDB:EOG43BQXK NextBio:20811434
GO:GO:0065007 GO:GO:0007000 GO:GO:0031125 Uniprot:Q9UTN3
Length = 684
Score = 210 (79.0 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 59/197 (29%), Positives = 102/197 (51%)
Query: 1396 TSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSY 1455
T V +DISF P GL+T +V +++PA PL +++K FL R+L++ + GGLSSY
Sbjct: 351 TKVHVDISFNQPG--GLKTCLVVNGFMKKYPALRPLVIIIKHFLNMRALNEVFLGGLSSY 408
Query: 1456 CLMLLITRFLQHEHHLGRPI---NQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYI-K 1511
++ L+ FLQ L N+G LL++FL +G F + I+V G Y K
Sbjct: 409 AIVCLVVSFLQLHPRLSTGSMREEDNFGVLLLEFLELYGKQFYYDAVGIAVHNGGFYFSK 468
Query: 1512 RERGYSIDP-----IHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSLTPADD 1566
++ G+ + P + I DP N+V ++ + + F++ + +L S+L +L +
Sbjct: 469 KKMGW-LKPNQPYLLSIQDPVDFQNDVSKSSRGLLRVKATFANGFDLLTSKLYALASRIE 527
Query: 1567 QCSRPPYRLLPKIIPSI 1583
+ + P I+ +I
Sbjct: 528 REGVNRVKDFPSILSTI 544
Score = 83 (34.3 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 1239 VKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVVCLP 1279
V R+ +++ WP +FGS T L LP+SD+DLV+ P
Sbjct: 266 VSRINQAVLQKWPDVSLYVFGSFETKLYLPTSDLDLVIISP 306
Score = 40 (19.1 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 741 EWPTIAPVYFPSISSHL-LPATDR--LHLDVGHNWHNHVRQPFVPTLH 785
+WP ++ F S + L LP +D + + H++ + FV H
Sbjct: 276 KWPDVSLYVFGSFETKLYLPTSDLDLVIISPEHHYRGTKKDMFVLAHH 323
Score = 38 (18.4 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 611 VPAREGIATQSTQEDCVVNSVNSECRRF 638
+P REG T + V N NS+ +F
Sbjct: 134 IPKREGRKTNPVHDKAVEN--NSDFIKF 159
>WB|WBGene00014115 [details] [associations]
symbol:gld-4 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0040010 GO:GO:0048471 GO:GO:0046872 GO:GO:0006378
GO:GO:0040035 GO:GO:0007281 GO:GO:0043186 GO:GO:0004652
InterPro:IPR002058 KO:K03514 EMBL:Z79759 EMBL:FJ610054
RefSeq:NP_492446.3 UniGene:Cel.16131 ProteinModelPortal:G5EFL0
SMR:G5EFL0 EnsemblMetazoa:ZK858.1 GeneID:172735
KEGG:cel:CELE_ZK858.1 CTD:172735 WormBase:ZK858.1
GeneTree:ENSGT00400000022055 OMA:KISMFGS NextBio:876795
Uniprot:G5EFL0
Length = 845
Score = 211 (79.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 72/228 (31%), Positives = 111/228 (48%)
Query: 1342 DLIASAASSVQSPKEDAAHTT--LKHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVR 1399
D++ V +P + A T L+ DN S MV + P D T +
Sbjct: 141 DVLVECDDWVGTPGDWLAETARGLEADNIAESVMV-YGGAFVPIVKMVDRD-----TRLS 194
Query: 1400 LDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLML 1459
+DISF + G++ + ++ E+FP PL L+LKQFL R+L+Q+++GGLSSY L+L
Sbjct: 195 IDISFNTVQ--GVRAASYIAKVKEEFPLIEPLVLLLKQFLHYRNLNQTFTGGLSSYGLVL 252
Query: 1460 LITRFLQ-HEHHL-GRPINQ---NYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER 1514
L+ F Q + ++ R I N G LL+ FL + F+ +M IS G YI +
Sbjct: 253 LLVNFFQLYALNMRSRTIYDRGVNLGHLLLRFLELYSLEFNFEEMGIS-PGQCCYIPKSA 311
Query: 1515 -----GYS-IDP--IHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSIL 1554
G+ P + ++DP N+VGR+ + AF A+ IL
Sbjct: 312 SGARYGHKQAQPGNLALEDPLLTANDVGRSTYNFSSIANAFGQAFQIL 359
Score = 61 (26.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 1240 KRVTRSLQVLWPRS--RTNIFGSNATGLSLPSSDVDLVV 1276
++V S+ W + + ++FGS T L LP+SD+D++V
Sbjct: 106 EKVRDSVLRRWKQKTIKISMFGSLRTNLFLPTSDIDVLV 144
>CGD|CAL0005626 [details] [associations]
symbol:orf19.429 species:5476 "Candida albicans" [GO:0031125
"rRNA 3'-end processing" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IEA]
[GO:0071050 "snoRNA polyadenylation" evidence=IEA] [GO:0071035
"nuclear polyadenylation-dependent rRNA catabolic process"
evidence=IEA] [GO:0071039 "nuclear polyadenylation-dependent CUT
catabolic process" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IEA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IEA]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IEA] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IEA]
[GO:0071040 "nuclear polyadenylation-dependent antisense transcript
catabolic process" evidence=IEA] [GO:0007000 "nucleolus
organization" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end
processing" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0051575
"5'-deoxyribose-5-phosphate lyase activity" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 CGD:CAL0005626
Pfam:PF03828 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0016779 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715864.1 RefSeq:XP_715914.1 ProteinModelPortal:Q5A2B2
STRING:Q5A2B2 GeneID:3642450 GeneID:3642482 KEGG:cal:CaO19.429
KEGG:cal:CaO19.8059 Uniprot:Q5A2B2
Length = 603
Score = 151 (58.2 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 50/188 (26%), Positives = 80/188 (42%)
Query: 1392 IKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGG 1451
+ + + +D+SF+ + GL ++ P L LV+KQFL R L+ + GG
Sbjct: 274 VDPVSELHIDVSFERTN--GLDAAKRIRRWLISTPGLRELVLVIKQFLRSRRLNNVHVGG 331
Query: 1452 LSSYCLMLLITRFLQHEHHLGRPINQ---NYGRLLMDFLYFFGNVF-----------DPR 1497
L Y +++ FL+ L N G LL++F +G F D
Sbjct: 332 LGGYATIIMCYHFLRLHPKLSTSSMDALDNLGVLLIEFFELYGRNFSYDNLILSLDRDTE 391
Query: 1498 QMRISVQGSGVYIKRERG-YSIDPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILES 1556
+ R +G+ + R +SI I DP TNN+ R+ + + KAF AY +L
Sbjct: 392 EPRYEKKGNHPILNTARNTFSIV---IQDPADTTNNITRSSYNLRDLKKAFGGAYQLLVE 448
Query: 1557 ELTSLTPA 1564
+ L A
Sbjct: 449 KCYQLNAA 456
Score = 93 (37.8 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 1236 NWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDLVV 1276
N + + + + WP + T++FGS AT L LP SD+D+VV
Sbjct: 191 NNVISTLKKEIGKFWPGTETHVFGSCATDLYLPGSDIDMVV 231
Score = 44 (20.5 bits), Expect = 8.0e-11, Sum P(3) = 8.0e-11
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 186 DEISNGGFLRGEESELAGDWV-EFDWLKAK 214
+++SNG + GE + WV + D K K
Sbjct: 134 NDLSNGDYAHGETPNSSYPWVKDHDHSKQK 163
>UNIPROTKB|H3BQM0 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 HGNC:HGNC:30758 ProteinModelPortal:H3BQM0 SMR:H3BQM0
Ensembl:ENST00000561678 Bgee:H3BQM0 Uniprot:H3BQM0
Length = 588
Score = 120 (47.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 1476 NQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRF 1528
N NYG LL++F +G F+ + I ++ G Y+ ++ GY ++I+DP
Sbjct: 275 NTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQ 334
Query: 1529 PTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
P N+VGR+ + Q +AF AY +L ++ +
Sbjct: 335 PGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPI 367
Score = 109 (43.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 134 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 192
Query: 1275 VV 1276
VV
Sbjct: 193 VV 194
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 212 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 264
Query: 1424 QFP 1426
P
Sbjct: 265 LHP 267
Score = 43 (20.2 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 1320 DSLKTVENTAIPIIMLV---VEVPHDLIASAASSVQS 1353
DS+K ++ +PII L EV D+ + + V++
Sbjct: 219 DSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRA 255
>RGD|1309587 [details] [associations]
symbol:Papd5 "PAP associated domain containing 5" species:10116
"Rattus norvegicus" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
RGD:1309587 InterPro:IPR002058 GO:GO:0016779 IPI:IPI00947804
Ensembl:ENSRNOT00000066059 ArrayExpress:D3ZZS9 Uniprot:D3ZZS9
Length = 590
Score = 120 (47.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 1476 NQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRF 1528
N NYG LL++F +G F+ + I ++ G Y+ ++ GY ++I+DP
Sbjct: 277 NTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQ 336
Query: 1529 PTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
P N+VGR+ + Q +AF AY +L ++ +
Sbjct: 337 PGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPI 369
Score = 109 (43.4 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 136 EEISDFYEYMSPRPEEEKMRME-VVSRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 194
Query: 1275 VV 1276
VV
Sbjct: 195 VV 196
Score = 58 (25.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 214 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 266
Query: 1424 QFP 1426
P
Sbjct: 267 LHP 269
Score = 43 (20.2 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 1320 DSLKTVENTAIPIIMLV---VEVPHDLIASAASSVQS 1353
DS+K ++ +PII L EV D+ + + V++
Sbjct: 221 DSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRA 257
>UNIPROTKB|J9PAB7 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000049926 Uniprot:J9PAB7
Length = 598
Score = 120 (47.3 bits), Expect = 4.3e-10, Sum P(4) = 4.3e-10
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 1476 NQNYGRLLMDFLYFFGNVFDPRQMRISVQGSGVYIKRER-------GYSIDPIHIDDPRF 1528
N NYG LL++F +G F+ + I ++ G Y+ ++ GY ++I+DP
Sbjct: 285 NTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQ 344
Query: 1529 PTNNVGRNCFRIHQCIKAFSDAYSILESELTSL 1561
P N+VGR+ + Q +AF AY +L ++ +
Sbjct: 345 PGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPI 377
Score = 109 (43.4 bits), Expect = 4.3e-10, Sum P(4) = 4.3e-10
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 1215 EEIDSFCKQVAAENTARKPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGLSLPSSDVDL 1274
EEI F + ++ K + V R+ ++ LWP + IFGS TGL LP+SD+DL
Sbjct: 144 EEISDFYEYMSPRPEEEKMRME-VVNRIESVIKELWPSADVQIFGSFKTGLYLPTSDIDL 202
Query: 1275 VV 1276
VV
Sbjct: 203 VV 204
Score = 58 (25.5 bits), Expect = 4.3e-10, Sum P(4) = 4.3e-10
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 1364 KHDNHVHSDMVALDDSASPKCSHTSSDNIKAATSVRLDISFKSPSHTGLQTTDLVKELTE 1423
KH + LD + P T S T V++DISF + G++ DL+K+ T+
Sbjct: 222 KHKVADEDSVKVLDKATVPIIKLTDS-----FTEVKVDISFNVQN--GVRAADLIKDFTK 274
Query: 1424 QFP 1426
P
Sbjct: 275 LHP 277
Score = 43 (20.2 bits), Expect = 1.3e-08, Sum P(4) = 1.3e-08
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 1320 DSLKTVENTAIPIIMLV---VEVPHDLIASAASSVQS 1353
DS+K ++ +PII L EV D+ + + V++
Sbjct: 229 DSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVRA 265
Score = 38 (18.4 bits), Expect = 4.3e-10, Sum P(4) = 4.3e-10
Identities = 14/53 (26%), Positives = 16/53 (30%)
Query: 520 HQEHARALVAGKGRXXXXXXXXXXXXXXXXXXXXPVPVKDPKVSVLETSSSIS 572
HQ A A A G PVPV P V + +S S
Sbjct: 34 HQPAAWARRAAAGPSASPSPSASPSPSPHSAAAVPVPVPVPAVEPADPASGSS 86
>UNIPROTKB|G4NER0 [details] [associations]
symbol:MGG_00073 "DNA polymerase sigma" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 EMBL:CM001235
InterPro:IPR002058 KO:K03514 GO:GO:0016779 RefSeq:XP_003719067.1
ProteinModelPortal:G4NER0 EnsemblFungi:MGG_00073T0 GeneID:2675081
KEGG:mgr:MGG_00073 Uniprot:G4NER0
Length = 703
Score = 163 (62.4 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 1392 IKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGG 1451
+ + T +++D+SF++ TG++ + EQFP L +K FLA R L++ +GG
Sbjct: 488 VDSRTGLKVDVSFENI--TGIRAIETFLAWREQFPDMPVLVTCIKHFLAMRGLNEPANGG 545
Query: 1452 LSSYCLMLLITRFLQHEHHL-GRPIN--QNYGRLLMDFLYFFGNVFDPRQMRISVQGSGV 1508
+ ++ L+ LQ + R + + G+LL+ F +GN F ++ IS+
Sbjct: 546 IGGTTVICLVVSMLQLSPDVQSRSMTPESHLGQLLLRFFDLYGNRFSYDRVAISMNPPR- 604
Query: 1509 YIKRERGYSI-----DPIHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELTSLT 1562
YI + + +I D + I DP P N++ I AFS A+ +L + +LT
Sbjct: 605 YIPKSQVTNIVYRNTDRLSIIDPNNPENDISGGSGNIRTIKAAFSQAHDLLRERVATLT 663
Score = 56 (24.8 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 1258 FGSNATGLSLPSSDVDLVVC 1277
FGS + L LP+ D+DLV C
Sbjct: 419 FGSFKSNLYLPTGDMDLVFC 438
Score = 44 (20.5 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 584 SAQNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQSTQEDCVVNSVNSECRRFS 639
+A +S D + ++ S S R S QED +V S N++ + ++
Sbjct: 233 AADFISCDFDDSDDDEGEDEESQPETSPRGRRHAQNDSDQEDTLVASKNADAQSYA 288
>DICTYBASE|DDB_G0295737 [details] [associations]
symbol:DDB_G0295737 "PAP/25A-associated
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0295737 Pfam:PF03828
EMBL:AAFI02000149 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_002649102.1 EnsemblProtists:DDB0252871 GeneID:8627367
KEGG:ddi:DDB_G0295737 OMA:NIDICFD Uniprot:C7G070
Length = 938
Score = 138 (53.6 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 44/158 (27%), Positives = 79/158 (50%)
Query: 1400 LDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSGGLSSYCLML 1459
+DI F +P+ G++ T +VK L +Q+ + L L++K FL +L+++Y+GG+ SY L L
Sbjct: 565 IDICFDTPN--GIENTAVVKGLLKQYKSMRTLLLIIKFFLHQNNLNETYTGGIGSYALAL 622
Query: 1460 LITRFLQ-----HEHHLGRP---INQNYGRL--LMDF---LYFFGNVFDPRQMRISVQG- 1505
++ F+Q H++ P I + Y D+ L F ++ R S+ G
Sbjct: 623 MVVSFIQLRYVPHQYRCQSPTSKIRREYRHAGDATDYGSMLIEFLELYG-RSFNYSLYGI 681
Query: 1506 ---SGVYIKRERGYSIDPIHIDDPRFPTNNVGRNCFRI 1540
+G Y ++ + + DP N+VG++ F I
Sbjct: 682 SLENGGYYYKKEEQWGTSLTLIDPHDRDNDVGKSSFNI 719
Score = 76 (31.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 1240 KRVTRSLQVL----WPRSRTNIFGSNATGLSLPSSDVDLVVCLPPVRNLEPIKE 1289
+++ R L + WP++ +FGS ++ L +PSSD+D+ + + N E + +
Sbjct: 468 QKIIRDLDAIVKSNWPKANVVVFGSFSSNLFIPSSDIDIQIS--GINNAESVNK 519
Score = 46 (21.3 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 28/144 (19%), Positives = 66/144 (45%)
Query: 586 QNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQSTQEDCVV--NSVNSECRRFSNGRI 643
QN + +N+ SN +N SS +S S + + Q+ ++ + + + + ++
Sbjct: 193 QNNNNNNNNNSNSNNNNNSSPSSFS---KSPSYPKKYQKPNIIPTDKIKEKINQ-TDDHH 248
Query: 644 DNQTQHFLQETTDSKVECNIISPDMPARDLDNAFGNSISGINFQNSFHESETGAISV--- 700
N+ + ++ D K E ++ P P + ++ +S S +S +++T + S+
Sbjct: 249 SNKEFSMIHDSEDDKKESSMTQPPSPKKTSSSSSSSSSSS---SSSASQTQTQSPSLPST 305
Query: 701 -LPD--KGIEALEIKKESAVTQDQ 721
LP + ++++ + S TQ Q
Sbjct: 306 QLPTTTQQPQSIQTSQPSTTTQPQ 329
Score = 44 (20.5 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 742 WPTIAPVYFPSISSHL-LPATD 762
WP V F S SS+L +P++D
Sbjct: 482 WPKANVVVFGSFSSNLFIPSSD 503
Score = 41 (19.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 14/68 (20%), Positives = 33/68 (48%)
Query: 566 ETSSSISLQDEVEKYDKLSAQNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQSTQED 625
+ S L+D E + +S N + +NS S+ ++N ++ S+++ +T + +
Sbjct: 66 QKDSKEPLKDNKEN-NNISDNNNNNNNSNNSSTGSNNNNNNNSSTINNNNNSSTSNNNNN 124
Query: 626 CVVNSVNS 633
N+ N+
Sbjct: 125 NNNNNNNN 132
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 576 EVEKYDKLSAQNVSVDNSTCSNVLASNQSSCTSASVPAREGIATQSTQ 623
E +K + Q S T S+ +S+ SS +SAS + + STQ
Sbjct: 260 EDDKKESSMTQPPS-PKKTSSSSSSSSSSSSSSASQTQTQSPSLPSTQ 306
>POMBASE|SPCC663.12 [details] [associations]
symbol:cid12 "poly(A) polymerase Cid12" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IGI;IMP] [GO:0031134
"sister chromatid biorientation" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
[GO:0043631 "RNA polyadenylation" evidence=ISM] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051315 "attachment of spindle
microtubules to kinetochore involved in mitotic sister chromatid
segregation" evidence=IMP] PomBase:SPCC663.12 Pfam:PF03828
GO:GO:0005829 GO:GO:0005524 GO:GO:0000077 GO:GO:0007094
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003723
GO:GO:0030702 GO:GO:0031048 GO:GO:0031134 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 PIR:T41543 RefSeq:NP_588273.1
ProteinModelPortal:O74518 STRING:O74518 EnsemblFungi:SPCC663.12.1
GeneID:2539423 KEGG:spo:SPCC663.12 KO:K11700 OrthoDB:EOG4B8NQ6
NextBio:20800587 GO:GO:0031380 GO:GO:0043631 Uniprot:O74518
Length = 336
Score = 131 (51.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 43/176 (24%), Positives = 84/176 (47%)
Query: 1391 NIKAATSVRLDISFKSPSHTGLQTTDLVKELTEQFPASTPLALVLKQFLADRSLDQSYSG 1450
N+ + + +D++F + +T +L K E+ P L ++LK +L +R L+ + G
Sbjct: 119 NLVDVSGIGVDLTFGNDK--ACRTAELQKAYNEEHPIFGRLLMLLKHWLFERDLENVHHG 176
Query: 1451 GLSSYCLMLLITRFLQHEHHLGRPIN---QNYGRLLMDFLYFFGNVFDPRQMRISVQGSG 1507
G++S L ++ +L+ H + I+ Q LL F YF+G + +
Sbjct: 177 GIASCALSYMLIGWLEMRFHK-KGIDSEVQPIRALLQKFFYFWGVEWTYELFVLRPLTGQ 235
Query: 1508 VYIKRERGY--SIDP--IHIDDPRFPTNNVGRNCFRIHQCIKAFSDAYSILESELT 1559
+ K ++G+ + P + I+DP N++G+ F+I AF + + L S+ T
Sbjct: 236 IVPKLQKGWLNEVQPNLLSIEDPIDRNNDIGKQSFQISMIKAAFVASANELLSDKT 291
Score = 49 (22.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 1257 IFGSNATGLSLPSSDVDLVVCLPPVRNLE 1285
++GS G +L SDVD+ + P V LE
Sbjct: 63 VYGSMYIGTTLSISDVDVSLKSPRVGELE 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1588 1471 0.00096 124 3 11 22 0.42 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 636 (68 KB)
Total size of DFA: 659 KB (2288 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 124.22u 0.10s 124.32t Elapsed: 00:00:05
Total cpu time: 124.23u 0.10s 124.33t Elapsed: 00:00:05
Start: Sat May 11 07:10:53 2013 End: Sat May 11 07:10:58 2013