BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000388
(1587 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEKQKQG 375
C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K K+
Sbjct: 1898 CQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKK- 1955
Query: 376 SDIEGKRTNKQ 386
I+GK++N+Q
Sbjct: 1956 LQIKGKKSNEQ 1966
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 312 EQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
E+D C++CG + RED L +C C D H C+ LQ+VP +W C EC
Sbjct: 182 EEDPTFCEVCGRSDREDRLLLCDGC-DAGYHMECLDPPLQEVPVDEWFCPEC 232
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 312 EQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
E+D C++CG + RED L +C C D H C+ LQ+VP +W C EC
Sbjct: 180 EEDPTFCEVCGRSDREDRLLLCDGC-DAGYHMECLDPPLQEVPVDEWFCPEC 230
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEKQKQG 375
C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K K+
Sbjct: 1934 CQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKK- 1991
Query: 376 SDIEGKRTNK 385
++GK+TN+
Sbjct: 1992 LHVKGKKTNE 2001
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C IC G + + +C C D HTYC++ L+ VPEGDW C EC+
Sbjct: 1151 CKICRKKGDAENMVLCDGC-DRGHHTYCVRPKLKTVPEGDWFCPECR 1196
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 174 SENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPV 233
+ R + NL S AS+ L L ++ + +IP + V S P R
Sbjct: 151 AHYERILYPYNLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPSESCPPARRA- 209
Query: 234 PDSQSDKRLVESSSDVLTKVHQKSEAETD----RDNGEPPDEALKCLDKDKEELTSTQLA 289
KRL ++++ T+ E T R PP KC + +KE ++ +LA
Sbjct: 210 ------KRLRAEATNIKTE-SDSPEVRTHNLRRRMGCAPP----KC-ENEKETYSAVKLA 257
Query: 290 ELPDVQRFPAASGDETDESDIMEQ------DVKVCDICGDAGREDLLAICSRCSDGAEHT 343
E + A E D++ + D+ VC +CG ED L +C C D + HT
Sbjct: 258 E-----KREHAGEQERDKAKARSKKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDD-SYHT 311
Query: 344 YCMKEMLQKVPEGDWLCEECKFAEETEKQKQGSDIE 379
+C+ L VP+GDW C +C A+E K ++ E
Sbjct: 312 FCLIPPLHDVPKGDWRCPQC-LAQECNKPQEAFGFE 346
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC +CG ED L +C C D HT+C+ L VP+GDW C +C A+E K +
Sbjct: 308 DLYVCLLCGSGNDEDRLLLCDGCDDSY-HTFCLVPPLHDVPKGDWRCPKC-LAQECNKPQ 365
Query: 374 QGSDIE 379
+ E
Sbjct: 366 EAFGFE 371
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC +CG ED L +C C D + HT+C+ L VP+GDW C +C A+E K +
Sbjct: 308 DLYVCLLCGSGNDEDRLLLCDGCDD-SYHTFCLIPPLHDVPKGDWRCPKC-LAQECSKPQ 365
Query: 374 QGSDIE 379
+ E
Sbjct: 366 EAFGFE 371
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC CG ED L +C C D HT+C+ L VP+GDW C +C AEE K +
Sbjct: 292 DLYVCMFCGRGNNEDKLLLCDGCDDSY-HTFCLLPPLPDVPKGDWRCPKC-VAEECNKPR 349
Query: 374 QGSDIE 379
+ E
Sbjct: 350 EAFGFE 355
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC CG ED L +C C D HT+C+ L VP+GDW C +C AEE K +
Sbjct: 292 DLYVCMFCGRGNNEDKLLLCDGCDDSY-HTFCLIPPLPDVPKGDWRCPKC-VAEECSKPR 349
Query: 374 QGSDIE 379
+ E
Sbjct: 350 EAFGFE 355
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C IC G + + +C C D HTYC++ L+ VP+GDW C EC+
Sbjct: 1152 CKICRKKGDAENMVLCDGC-DRGHHTYCVRPKLKAVPDGDWFCPECR 1197
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
C++CG + RED L +C C D H C+ LQ+VP +W C EC
Sbjct: 191 CEVCGRSDREDRLLLCDGC-DAGYHMECLDPPLQEVPVDEWFCPEC 235
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
C +C G + + +C C D H YC++ L+ VPEGDW C EC
Sbjct: 225 CKVCRKKGDGESMVLCDGC-DRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|Q6IQX0|KD5BB_DANRE Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2
Length = 1503
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
D+ VC +CG ED L +C C D + HT+C+ L VP+GDW C +C
Sbjct: 294 DLYVCLVCGKGNDEDRLLLCDGCDD-SYHTFCLIPPLTDVPKGDWRCPKC 342
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQGS 376
VC+ CG A L +C C D + HTYC+ LQ VP+G W C+ C + G+
Sbjct: 1009 VCEACGKATDPGRLLLCDDC-DISYHTYCLDPPLQTVPKGGWKCKWCVWCRHC-----GA 1062
Query: 377 DIEGKRTNKQSTSTQ 391
G R Q+ TQ
Sbjct: 1063 TSAGLRCEWQNNYTQ 1077
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEE 368
+ KVC C +G + + +C C G HT+C++ +++ VP W C+ C+ E
Sbjct: 387 ECKVCQNCKQSGEDSKMLVCDTCDKGY-HTFCLQPVMKSVPTNGWKCKNCRICIE 440
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQGS 376
VC+ CG A L +C C D + HTYC+ LQ VP+G W C+ C + G+
Sbjct: 1002 VCEACGKATDPGRLLLCDDC-DISYHTYCLDPPLQTVPKGGWKCKWCVWCRHC-----GA 1055
Query: 377 DIEGKRTNKQSTSTQ 391
G R Q+ TQ
Sbjct: 1056 TSAGLRCEWQNNYTQ 1070
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEE 368
+ KVC C +G + + +C C G HT+C++ +++ VP W C+ C+ E
Sbjct: 386 ECKVCQNCKQSGEDSKMLVCDTCDKGY-HTFCLQPVMKSVPTNGWKCKNCRICIE 439
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQGS 376
C C ++LL +C C G HTYC + + ++PEGDW C C + S
Sbjct: 1478 TCLYCRKGDNDELLLLCDSCDRGC-HTYCHRPRMNEIPEGDWFCPTCISLQ--------S 1528
Query: 377 DIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQ---AIETSPG 417
+ E R++ S + R E+ + P+ +R+ A + SPG
Sbjct: 1529 ESEFLRSSGSSKRIRKCTVRFTEDSPSKPSRRREHPTASQFSPG 1572
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 273 LKCLDKD-KEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLA 331
L+CL + K+E+ ++ V + P A DE VC +CG +D +
Sbjct: 1259 LECLSAEMKKEIKDIVVS----VNKLPKAPWDEG-----------VCKVCGVDKDDDSVL 1303
Query: 332 ICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQ 372
+C C D HTYC+ L ++P+G+W C C A+ ++
Sbjct: 1304 LCDTC-DAEYHTYCLNPPLIRIPDGNWYCPSCVIAKRMAQE 1343
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEK 371
C CG +L+ +C C G H C+ + ++ P DW+C +C+ E K
Sbjct: 86 CGACGRPESIELVVVCDACERGF-HMSCVNDGVEAAPSADWMCSDCRTGGERSK 138
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEKQKQ 374
C +C ++ L +C C G H YC + ++ VPEGDW C C + EE Q+
Sbjct: 1664 TCLVCRKGDNDEFLLLCDGCDRGC-HIYCHRPKMEAVPEGDWFCAVCLSQQVEEEYTQRP 1722
Query: 375 GSDIEGKR 382
G G++
Sbjct: 1723 GFPKRGQK 1730
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C +C G +D L +C C + A H +C++ L ++P G+WLC C+
Sbjct: 1205 CKVCRRKGEDDKLILCDEC-NKAFHLFCLRPALYRIPAGEWLCPACQ 1250
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFA 366
C +C G +D L +C C + A H +C++ +L +P+G+WLC C+ A
Sbjct: 1154 CKVCRKKGEDDKLILCDEC-NKAFHLFCLRPVLFNIPDGEWLCPACQPA 1201
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETE---KQK 373
C +C ++ L +C C G H YC + ++ VPEGDW C C A++ E QK
Sbjct: 1678 TCLVCRKGDNDEFLLLCDGCDRGC-HIYCHRPKMEAVPEGDWFCTVC-LAQQVEGEFTQK 1735
Query: 374 QGSDIEGKR 382
G G++
Sbjct: 1736 PGFPKRGQK 1744
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
VC++CG A L +C C D + HTYC+ L VP+G W C+ C
Sbjct: 1385 VCEVCGQASDPSRLLLCDDC-DISYHTYCLDPPLLTVPKGGWKCKWC 1430
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKF 365
+ KVC C G + + +C C G HT+C+K ++ +P W C+ C+
Sbjct: 272 ECKVCQSCRKPGNDSKMLVCETCDKGY-HTFCLKPPMEDLPAHSWKCKTCRL 322
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
VC++CG A L +C C D + HTYC+ L VP+G W C+ C
Sbjct: 1429 VCEVCGQASDPSRLLLCDDC-DISYHTYCLDPPLLTVPKGGWKCKWC 1474
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKF 365
+ KVC C G + + +C C G HT+C+K ++++P W C+ C+
Sbjct: 272 ECKVCQACRKPGNDSKMLVCETCDKGY-HTFCLKPPMEELPAHSWKCKACRV 322
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 310 IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK---FA 366
I+ D + C CG +L+ +C C G HT C++ L +P+G+W C C+
Sbjct: 886 ILADDDEPCKKCGLPNHPELILLCDSCDSGY-HTACLRPPLMIIPDGEWFCPPCQHKLLC 944
Query: 367 EETEKQKQGSDIEGKRTNK 385
E+ E+Q Q D+ K+ +
Sbjct: 945 EKLEEQLQDLDVALKKKER 963
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQGS 376
+C IC E+ + +C C D + HT+C+ L +P+G+WLC C EE K ++
Sbjct: 450 ICHICNRGDVEESMLLCDGCDD-SYHTFCLLPPLTSIPKGEWLCPRC-VVEEVSKPQEAF 507
Query: 377 DIE 379
E
Sbjct: 508 GFE 510
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFA 366
C +C G +D L +C C + A H +C++ L +VP+G+W C C+ A
Sbjct: 1187 CKVCRKKGEDDKLILCDEC-NKAFHLFCLRPALYEVPDGEWQCPACQPA 1234
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C +C G +D L +C C + A H +C++ L +VP+G+W C C+
Sbjct: 1187 CKVCRKKGEDDKLILCDEC-NKAFHLFCLRPALYEVPDGEWQCPACQ 1232
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D +C +C +D L C C D H +C+ L ++P G W C +C AE K
Sbjct: 313 DSYICQVCSRGDEDDKLLFCDGCDDNY-HIFCLLPPLPEIPRGIWRCPKCILAE----CK 367
Query: 374 QGSDIEGKRTNKQSTSTQSSGK 395
Q + G Q S QS G+
Sbjct: 368 QPPEAFGFEQATQEYSLQSFGE 389
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans
GN=rbr-2 PE=1 SV=2
Length = 1477
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 317 VCDICGDAGREDLLAICSR--CSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQ 374
C C + EDLL +C C++G HTYC +L +VPEG+W C +C E+E K
Sbjct: 321 FCVACNEGKDEDLLLLCDIDGCNNG-RHTYCCDPVLDEVPEGEWRCPKCI---ESEDAKI 376
Query: 375 GSD 377
G D
Sbjct: 377 GLD 379
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC IC +D L +C C D H +C+ L ++P G W C +C AE K
Sbjct: 316 DLYVCRICSRGDEDDKLLLCDGCDD-TYHIFCLIPPLPEIPRGVWRCPKCIMAE----CK 370
Query: 374 QGSDIEGKRTNKQSTSTQSSGK 395
+ + G Q + QS G+
Sbjct: 371 RPPEAFGFEQATQEYTLQSFGE 392
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D +C +C +D L C C D H +C+ L ++P G W C +C AE K
Sbjct: 313 DSYICQVCSRGDEDDKLLFCDGCDDNY-HIFCLLPPLPEIPRGIWRCPKCILAE----CK 367
Query: 374 QGSDIEGKRTNKQSTSTQSSGK 395
Q + G Q + QS G+
Sbjct: 368 QPPEAFGFEQATQEYTLQSFGE 389
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 308 SDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
SD E D C +C +C C D H YC+ L++VP GDW+C C
Sbjct: 228 SDFEEDDDDACIVCRKTNDPKRTILCDSC-DKPFHIYCLSPPLERVPSGDWICNTC 282
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae
GN=rbr-2 PE=3 SV=2
Length = 1482
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 317 VCDICGDAGREDLLAICSR--CSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQ 374
C C + EDLL +C C+ G HTYC +L +VPEG+W C +C E+E K
Sbjct: 324 YCVSCNEGKDEDLLLLCDIEGCNSG-RHTYCCDPVLDEVPEGEWRCPKCI---ESEDAKI 379
Query: 375 GSD 377
G D
Sbjct: 380 GLD 382
>sp|P58268|REQU_CHICK Zinc finger protein ubi-d4 OS=Gallus gallus GN=REQ PE=2 SV=1
Length = 405
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C+ICG + +D L C C G H YC+ + + PEG W C C
Sbjct: 340 ECKCCNICGTSENDDQLLFCDDCDRGY-HMYCLTPPMSEPPEGSWSCHLC 388
>sp|Q92785|REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo sapiens GN=DPF2 PE=1 SV=2
Length = 391
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C+ICG + +D L C C G H YC+ + + PEG W C C
Sbjct: 326 ECKCCNICGTSENDDQLLFCDDCDRGY-HMYCLTPSMSEPPEGSWSCHLC 374
>sp|Q8VZJ1|ATXR5_ARATH Histone-lysine N-methyltransferase ATXR5 OS=Arabidopsis thaliana
GN=ATXR5 PE=2 SV=1
Length = 352
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK----FAEETEKQK 373
C+ CG +D L +C +C G H C++ ++ +VP G WLC +C +ET K++
Sbjct: 67 CEKCGSGEGDDELLLCDKCDRGF-HMKCLRPIVVRVPIGTWLCVDCSDQRPVRKETRKRR 125
Query: 374 QGSDIEGKRTNKQ 386
+ + K+ ++
Sbjct: 126 RSCSLTVKKRRRK 138
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAE 367
VC IC D +C CSD H +C+ L +VP+G W C +C AE
Sbjct: 325 VCRICSRGDEVDKFLLCDGCSDNY-HIFCLLPPLSEVPKGVWRCPKCILAE 374
>sp|Q8WUB8|PHF10_HUMAN PHD finger protein 10 OS=Homo sapiens GN=PHF10 PE=1 SV=3
Length = 498
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQ 372
+ K C ICG E+ + C C G HT+C+ L +P G W+C+ C+ A T ++
Sbjct: 432 ECKTCIICGQPHHEEEMMFCDMCDRGY-HTFCVG--LGAIPSGRWICDCCQRAPPTPRK 487
>sp|Q9W636|REQUB_XENLA Zinc finger protein ubi-d4 B (Fragment) OS=Xenopus laevis GN=req-b
PE=2 SV=2
Length = 366
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C+ICG + +D L C C G H YC+ + + PEG W C C
Sbjct: 303 ECKCCNICGTSENDDQLLFCDDCDRGY-HMYCLSPPVAEPPEGSWSCHLC 351
>sp|A9LMC0|DPF3_DANRE Zinc finger protein DPF3 OS=Danio rerio GN=dpf3 PE=2 SV=1
Length = 391
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
+ K C +CG + +D L C C G H YC+K + + PEG W C C+
Sbjct: 329 ECKSCSLCGTSENDDQLLFCDDCDRGY-HMYCLKPPMTQPPEGSWSCHLCQ 378
>sp|Q61103|REQU_MOUSE Zinc finger protein ubi-d4 OS=Mus musculus GN=Dpf2 PE=1 SV=1
Length = 391
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C++CG + +D L C C G H YC+ + + PEG W C C
Sbjct: 326 ECKCCNLCGTSENDDQLLFCDDCDRGY-HMYCLTPSMSEPPEGSWSCHLC 374
>sp|Q4V7A6|PHF10_RAT PHD finger protein 10 OS=Rattus norvegicus GN=Phf10 PE=2 SV=2
Length = 497
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQ 372
+ K C ICG E+ + C C G HT+C+ L +P G W+C+ C+ A T ++
Sbjct: 431 ECKTCIICGQPHHEEEMMFCDVCDRGY-HTFCVG--LGAIPSGRWICDCCQRAPPTPRK 486
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKF 365
C+ CG + + +C C + A HT C+ L +P+ DW C+ CKF
Sbjct: 271 CEYCGLDKNPETILLCDGC-EAAYHTSCLDPPLTSIPKEDWYCDACKF 317
>sp|Q9D8M7|PHF10_MOUSE PHD finger protein 10 OS=Mus musculus GN=Phf10 PE=1 SV=4
Length = 497
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQ 372
+ K C ICG E+ + C C G HT+C+ L +P G W+C+ C+ A T ++
Sbjct: 431 ECKTCIICGQPHHEEEMMFCDVCDRGY-HTFCVG--LGAIPSGRWICDCCQRAPPTPRK 486
>sp|Q9W638|REQUA_XENLA Zinc finger protein ubi-d4 A OS=Xenopus laevis GN=req-a PE=2 SV=1
Length = 388
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C+ICG + +D L C C G H YC+ + + PEG W C C
Sbjct: 325 ECKCCNICGTSENDDQLLFCDDCDRGY-HMYCLVPPVAEPPEGSWSCHLC 373
>sp|Q9FNE9|ATXR6_ARATH Histone-lysine N-methyltransferase ATXR6 OS=Arabidopsis thaliana
GN=ATXR6 PE=2 SV=1
Length = 349
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
VC+ C + L +C +C G H +C++ +L VP+G W C C
Sbjct: 34 VCEECSSGKQPAKLLLCDKCDKGF-HLFCLRPILVSVPKGSWFCPSC 79
>sp|Q9QX66|DPF1_MOUSE Zinc finger protein neuro-d4 OS=Mus musculus GN=Dpf1 PE=1 SV=2
Length = 387
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C +CG + +D L C C G H YC+ + + PEG W C C
Sbjct: 324 ECKSCSLCGTSENDDQLLFCDDCDRGY-HMYCLSPPMAEPPEGSWSCHLC 372
>sp|Q2T9V9|PHF10_BOVIN PHD finger protein 10 OS=Bos taurus GN=PHF10 PE=2 SV=1
Length = 410
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQ 372
+ K C ICG E+ + C C G HT+C+ L +P G W+C+ C+ A T ++
Sbjct: 344 ECKTCIICGQPHHEEEMMFCDVCDRGY-HTFCVG--LGAIPSGRWICDCCQRAPPTPRK 399
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAE 367
VC +C +D L +C C D H +C+ L ++P+G W C +C AE
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNY-HIFCLLPPLPEIPKGVWRCPKCVMAE 375
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 585,994,963
Number of Sequences: 539616
Number of extensions: 25928665
Number of successful extensions: 64930
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 491
Number of HSP's that attempted gapping in prelim test: 62124
Number of HSP's gapped (non-prelim): 2397
length of query: 1587
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1456
effective length of database: 120,879,763
effective search space: 176000934928
effective search space used: 176000934928
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)