Your job contains 1 sequence.
>000390
MSRKNRMRAESGTCNVCFAPCSSCMHLNLALMGSKTEEFSDETCRETTGSQYSINEADDL
RSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFS
SRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNM
DIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDK
RLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAA
SGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLC
EECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPL
SPSKAAALSRDSSFKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSF
STLNSKAKVKLVDEVVPQKQKATRDQASLDVKEGPSRVMGKSMSFKSTSSGRSSAGESKL
RALSPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGE
AVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQK
PNLVSPKEEPSSSSSEKPSTIVNELVQDGLPRSVESTNQGEKSSSCRSRPTLTAGSKGVL
CQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMHKLPGTYGRN
KVNDQLDGLGITNMDLNCERSSQDQFSVSNKMKGAQEVLINKQTTINQLKPALLKISAVP
EHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWP
TMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQL
PENCQRWNLLFFLWGVFRVRKVNCSNSTKHSCFAGSKMVPLDRVITTDNLSLSQNILPKH
ADKDSAACDTSHNIVPGSYGPDGTCVTLNENCDNKASSVQLTSLGSQSNSIQHDGRFDSR
LLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRTSISCSKGGTSEMNG
DASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVP
DIMESGRDQINLERDLNKGTFDADKIPVITKSGRDQINLERDLNESIVDGKIVPDKIKSG
RDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLPDIVKSDRDQID
LERDLKEGRYMNAETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQKMPWNE
AFLDGESSSKKLKTGFAGPYECSSSRDGDSCSDGFSSRRDDLCPSSSNQEKISEELLDRK
VILKDLESPERYFFHVDSHRENDCRLGANSMPWKELSSKDEDELLDTVPNLNLALGADTK
QPNKGMLPFFVGPLEKNNNQDRPPDKGADKGAEEDISASLSLSLSFPFPDKEQTSVKPAS
KTEQLLPERRHVNTSLLLFGGFLDK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000390
(1585 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029147 - symbol:AT1G43770 "AT1G43770" species... 238 1.3e-22 2
TAIR|locus:2141010 - symbol:AT4G17850 species:3702 "Arabi... 189 2.6e-13 1
UNIPROTKB|E2RP59 - symbol:BAZ2B "Uncharacterized protein"... 165 5.7e-08 4
TAIR|locus:2159396 - symbol:AT5G61100 species:3702 "Arabi... 151 6.4e-08 1
UNIPROTKB|E2RP61 - symbol:BAZ2B "Uncharacterized protein"... 165 6.9e-08 4
UNIPROTKB|F1P2F7 - symbol:BAZ2B "Bromodomain adjacent to ... 168 1.2e-07 3
UNIPROTKB|E1C3I8 - symbol:BAZ2B "Bromodomain adjacent to ... 168 1.2e-07 3
UNIPROTKB|Q9DE13 - symbol:BAZ2B "Bromodomain adjacent to ... 168 1.2e-07 3
UNIPROTKB|Q9UIF8 - symbol:BAZ2B "Bromodomain adjacent to ... 166 4.0e-07 3
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 166 6.0e-07 2
UNIPROTKB|F1MCP3 - symbol:BAZ2B "Uncharacterized protein"... 157 6.1e-07 4
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 166 6.1e-07 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 166 6.1e-07 2
UNIPROTKB|E1BNJ5 - symbol:BAZ2B "Uncharacterized protein"... 157 6.8e-07 4
RGD|1311245 - symbol:Rsf1 "remodeling and spacing factor ... 142 7.6e-07 2
UNIPROTKB|F1NRS9 - symbol:BAZ2B "Bromodomain adjacent to ... 174 1.1e-06 3
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 155 1.3e-06 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 155 1.3e-06 1
TAIR|locus:2159406 - symbol:AT5G61110 species:3702 "Arabi... 124 2.2e-06 1
UNIPROTKB|F1STY8 - symbol:RSF1 "Uncharacterized protein" ... 149 2.6e-06 2
UNIPROTKB|F1P8R2 - symbol:RSF1 "Uncharacterized protein" ... 149 5.8e-06 1
UNIPROTKB|F1PJN4 - symbol:UHRF1 "Uncharacterized protein"... 146 5.9e-06 1
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 148 7.7e-06 1
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 148 7.7e-06 1
UNIPROTKB|F1MLK1 - symbol:RSF1 "Uncharacterized protein" ... 147 1.1e-05 2
ZFIN|ZDB-GENE-040724-145 - symbol:trim66 "tripartite moti... 144 1.5e-05 1
FB|FBgn0037344 - symbol:CG2926 species:7227 "Drosophila m... 143 2.1e-05 4
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 154 2.7e-05 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 155 3.1e-05 2
TAIR|locus:2103341 - symbol:AT3G60520 "AT3G60520" species... 112 4.1e-05 1
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 154 4.3e-05 2
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 138 4.3e-05 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 151 6.9e-05 2
UNIPROTKB|Q96T23 - symbol:RSF1 "Remodeling and spacing fa... 139 6.9e-05 1
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 155 7.1e-05 2
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 146 9.3e-05 2
MGI|MGI:1309478 - symbol:Baz1a "bromodomain adjacent to z... 128 0.00013 3
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 154 0.00014 2
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 154 0.00014 2
DICTYBASE|DDB_G0282427 - symbol:DDB_G0282427 "HMG1/2 (hig... 133 0.00015 1
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 145 0.00015 2
ZFIN|ZDB-GENE-010328-16 - symbol:baz1b "bromodomain adjac... 147 0.00017 2
DICTYBASE|DDB_G0291444 - symbol:DDB_G0291444 species:4468... 129 0.00017 1
DICTYBASE|DDB_G0282711 - symbol:DDB_G0282711 "PHD zinc fi... 143 0.00019 3
UNIPROTKB|F1MG25 - symbol:BAZ2B "Uncharacterized protein"... 137 0.00024 3
UNIPROTKB|Q9NRL2 - symbol:BAZ1A "Bromodomain adjacent to ... 133 0.00033 1
UNIPROTKB|J9P3J2 - symbol:BAZ1B "Uncharacterized protein"... 129 0.00034 2
UNIPROTKB|E2RED7 - symbol:BAZ1B "Uncharacterized protein"... 129 0.00039 2
UNIPROTKB|J9PAU7 - symbol:BAZ1B "Uncharacterized protein"... 129 0.00039 2
UNIPROTKB|H0YDG9 - symbol:RSF1 "Remodeling and spacing fa... 122 0.00039 1
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 139 0.00040 4
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 139 0.00040 4
UNIPROTKB|E1BN25 - symbol:BAZ1A "Uncharacterized protein"... 141 0.00043 2
UNIPROTKB|E2RE69 - symbol:BAZ1A "Uncharacterized protein"... 131 0.00046 3
UNIPROTKB|J9P748 - symbol:BAZ1A "Uncharacterized protein"... 131 0.00049 3
UNIPROTKB|E9PTW3 - symbol:Dspp "Dentin sialophosphoprotei... 129 0.00049 1
TAIR|locus:2159421 - symbol:AT5G61120 species:3702 "Arabi... 102 0.00059 2
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 134 0.00076 3
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 143 0.00078 2
TAIR|locus:2135575 - symbol:ORC1B "origin of replication ... 132 0.00079 2
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 120 0.00082 4
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 144 0.00091 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 144 0.00097 2
UNIPROTKB|F1LWS6 - symbol:F1LWS6 "Uncharacterized protein... 96 0.00099 2
UNIPROTKB|A6QQS0 - symbol:DPF2 "D4, zinc and double PHD f... 115 0.00099 2
>TAIR|locus:2029147 [details] [associations]
symbol:AT1G43770 "AT1G43770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC009526 EMBL:AB493497
IPI:IPI00891093 RefSeq:NP_001117432.1 UniGene:At.38927
ProteinModelPortal:B3H578 SMR:B3H578 EnsemblPlants:AT1G43770.2
GeneID:840971 KEGG:ath:AT1G43770 TAIR:At1g43770 eggNOG:NOG253133
HOGENOM:HOG000064612 OMA:SRKPHEL PhylomeDB:B3H578
ProtClustDB:CLSN2680393 Genevestigator:B3H578 Uniprot:B3H578
Length = 431
Score = 238 (88.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 845 IWQGGFEVHRGEKLPNLC--DGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTM 902
IW+G V G N C DGI AH+SS A KV E S R+ + +PR+ WP
Sbjct: 292 IWRGLMSVKGG----NSCTMDGIVAHVSSLACPKVHETASSLKGRLSAEILPRLEVWPKT 347
Query: 903 FHESGA-KEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLP 961
F ++G K+E++AL+FF + + + LVD M KND A+ L+ ELL+F S LP
Sbjct: 348 FLKNGGPKDESVALFFFPSSESNDEKVFDSLVDKMKKNDSAMRCVLNDAELLLFTSYMLP 407
Query: 962 ENCQRWNLLFFLWGVFRVRKVN 983
++ +N ++LWGVF+ R+ +
Sbjct: 408 KDSWTFNSKYYLWGVFKPRQTS 429
Score = 106 (42.4 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 41/183 (22%), Positives = 76/183 (41%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGD---WLCEECKFAEETEKQK 373
VC CGD G E+ L C C + H YC+ + +P + W+CE+C +E ++
Sbjct: 9 VCQTCGDIGFEEALVFCDSCMFESIHRYCLG--ITPIPFTEYITWICEDCDNSE-SDSDC 65
Query: 374 QDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAAL--SRD 431
+++ K+ + Q +N+ P + E+S P + L + +
Sbjct: 66 NEVDQTVKKKKKSRNQPLVVLAEDNVLQEPLEGSKREESSCSR----KPHELTCLDGNGE 121
Query: 432 SSFKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKL 491
S ++ D V + + +V +TA G +L ++ K K S +N V
Sbjct: 122 SVLEAADSSSVPDHSSCTSKRKEVDQTANL-GHILERSEKKKKKKKKKKS-INHSPPVLA 179
Query: 492 VDE 494
V++
Sbjct: 180 VED 182
Score = 48 (22.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 40/165 (24%), Positives = 70/165 (42%)
Query: 158 DNISCVSRAN--DTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIP 215
DN S N D + + +RN + L+ + L EG ++ +SS + E+
Sbjct: 57 DNSESDSDCNEVDQTVKKKKKSRNQPLVVLAEDNVLQEPL--EGSKREESSCSRKPHELT 114
Query: 216 SVEKVGASCGSPKVRSPVPDSQS--DKRL-VESSSD---VLTKVHQKSEAETDRD--NGE 267
++ G S S VPD S KR V+ +++ +L + +K + + + N
Sbjct: 115 CLDGNGESVLEAADSSSVPDHSSCTSKRKEVDQTANLGHILERSEKKKKKKKKKKSINHS 174
Query: 268 PPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIME 312
PP A++ D E +T + E +V ++ ET ES E
Sbjct: 175 PPVLAVE----DHELQGTTNVVEPVEVSS--SSPTKETMESKRQE 213
Score = 42 (19.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 717 KGVLCQKCKEVGHD 730
KG +CQ C ++G +
Sbjct: 6 KGPVCQTCGDIGFE 19
>TAIR|locus:2141010 [details] [associations]
symbol:AT4G17850 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161547 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AL021889
IPI:IPI00521139 PIR:T05071 RefSeq:NP_193519.1 UniGene:At.54381
ProteinModelPortal:O49684 SMR:O49684 EnsemblPlants:AT4G17850.1
GeneID:827508 KEGG:ath:AT4G17850 TAIR:At4g17850 eggNOG:NOG279356
HOGENOM:HOG000114728 OMA:PGIDINK PhylomeDB:O49684
ProtClustDB:CLSN2916157 Genevestigator:O49684 Uniprot:O49684
Length = 187
Score = 189 (71.6 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 303 DETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEE 362
++ +E +E+++ VCD CGD G E LL IC C GAEHTYCM E + KVP+ W C +
Sbjct: 25 NDNNELSHIEREITVCDTCGDQGYEYLLVICCNCGVGAEHTYCMMEKIDKVPDS-WSCYD 83
Query: 363 C-KFAEETEKQKQDIEG---KR-----TNKQSTSTQSSGKRHAE--NLDAAPAAKRQAIE 411
C K +E ++K + E KR TN T+ ++S +R + N ++ P + +
Sbjct: 84 CTKEVDEMREEKGNEETSSRKRKADAVTNFFETAEKTSSQRQFDLLNTESYPKIRNFDLN 143
Query: 412 TSP 414
P
Sbjct: 144 VDP 146
>UNIPROTKB|E2RP59 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AAEX03017693
Ensembl:ENSCAFT00000015012 Uniprot:E2RP59
Length = 2073
Score = 165 (63.1 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1835 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1893
Query: 372 -QKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
+K ++GK+TN+ + + E+ D+A + + + + LS+
Sbjct: 1894 IKKLQVKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDLKKRKMEENTSVNLSK 1953
Query: 431 DSSFKSLDKGK 441
SF S+ K K
Sbjct: 1954 QESFTSVKKPK 1964
Score = 59 (25.8 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 45/229 (19%), Positives = 89/229 (38%)
Query: 35 KTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVN 94
+T+ S + + N+ D R+ K K ++ A E+S+ NS DS + +
Sbjct: 198 QTKSISSGGGNRKCNQEQNKNQPLDARADKIKD-KKPRKKAMESSS----NSDSDSGTSS 252
Query: 95 AESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAE 154
S + SS+ D ED E + + + + + ++ L+ DPK A+
Sbjct: 253 DTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHGMSDPK-AD 311
Query: 155 GLDDNISCVS-RANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSE 213
G R + +SE+ + ++ + P + +Q+ E+
Sbjct: 312 GQKATEKAQEKRIHQPLPLVSESQTHSSFQSQQKQPQVLSQQLPFIFQSSQAKEESVNKH 371
Query: 214 IPSVEKVGASCGSPKVRSPVPDSQSDK--RLVESSSDVLTKVHQKSEAE 260
++ G + K S V ++ + +L+ S DVL K K+ +E
Sbjct: 372 TSVIQSTGL-VSNVKPLSLVNQAKKETYMKLIVPSPDVL-KAGNKNTSE 418
Score = 56 (24.8 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 21/84 (25%), Positives = 34/84 (40%)
Query: 240 KRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPA 299
K LVE + + ++E ++ E DE D + +E +Q +E D
Sbjct: 585 KSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQ-SE-SDSNSESD 642
Query: 300 ASGDETDESDIMEQDVKVCDICGD 323
G E D+ D +QD D G+
Sbjct: 643 TEGSEEDDDDDKDQDESDSDTEGE 666
Score = 52 (23.4 bits), Expect = 1.4e-07, Sum P(4) = 1.4e-07
Identities = 25/99 (25%), Positives = 35/99 (35%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L K + + + +
Sbjct: 1253 DKWVVEGKLRKLRIIHAKKTGKRDTSGGIDLGEEQHPLGTPTPGRKRRRKGGDSDFDDDD 1312
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLA 331
D A D+ DE D ++ K DIC D D A
Sbjct: 1313 DDDSDDQADEDDEDEEDKEDKKGKKTDICEDEDEGDQAA 1351
Score = 47 (21.6 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N ET ++D L F N + F+ +S
Sbjct: 2005 VIKKPMDFSTIREKLSSGQYPNLETFAVDVRLVFD--NCETFNEDDS 2049
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 47/250 (18%), Positives = 98/250 (39%)
Query: 32 MGSKTEEFSDE-TCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSV--NSSH 88
M S + SD T +T+ S +++DDL + ++++ + S+ S + S+
Sbjct: 238 MESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSN 297
Query: 89 DSFSVNAESKVTLRSSEISDASEDFEIH---PKFSSRGGTAEGQISPKLEIGLDQRISLN 145
+ ++ S + ++ +++ IH P S + Q K L Q++
Sbjct: 298 NQVLLHGMSDPKADGQKATEKAQEKRIHQPLPLVSESQTHSSFQSQQKQPQVLSQQLPFI 357
Query: 146 KYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSL--GPEGLE-- 201
E ++ + S + ST L N + + + N + + + P+ L+
Sbjct: 358 FQSSQAKEESVNKHTSVIQ-----STGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAG 412
Query: 202 -KAQSSEKLEL-SEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTK----VHQ 255
K S E L SE+ S + +++ S+S K+++ + S+ T H
Sbjct: 413 NKNTSEESSPLTSEMRSKREQYKQTFPAQLKKQ-ESSKSLKKVIAALSNPKTTSSSPAHP 471
Query: 256 KSEAETDRDN 265
K E + N
Sbjct: 472 KQTVENNHPN 481
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 212 SEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDE 271
S+IPS + S + D + D+ + S D ++ S +E+D + E D+
Sbjct: 596 SDIPSSKDSEDSNEDEEEDDEEEDEEDDED--DESDD--SQSESDSNSESDTEGSEEDDD 651
Query: 272 ALKCLDKDKEELTS 285
DKD++E S
Sbjct: 652 D----DKDQDESDS 661
Score = 38 (18.4 bits), Expect = 3.2e-06, Sum P(4) = 3.2e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 1063 EMAKELKKPNEDMCLADQKPLPELPRIP 1090
>TAIR|locus:2159396 [details] [associations]
symbol:AT5G61100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
IPI:IPI00537457 RefSeq:NP_200918.1 UniGene:At.51104
ProteinModelPortal:F4K1Z8 SMR:F4K1Z8 EnsemblPlants:AT5G61100.1
GeneID:836231 KEGG:ath:AT5G61100 OMA:RLWICEE Uniprot:F4K1Z8
Length = 227
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 298 PAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGD 357
P S D + +++ K C++CG E L+ C C D EHTYC + M Q+VP
Sbjct: 14 PTFSSDLSLSDSLVKLKKKPCEVCGSDANELLMMTCFMCRDTREHTYCARVMFQRVPRL- 72
Query: 358 WLCEECKFAEETEKQKQDIEGKRT 381
W+CEEC+ + + + RT
Sbjct: 73 WICEECRDFSSVANKTANAQSSRT 96
>UNIPROTKB|E2RP61 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 CTD:29994
OMA:DSDDQAD EMBL:AAEX03017693 RefSeq:XP_856450.2
Ensembl:ENSCAFT00000015011 GeneID:478762 KEGG:cfa:478762
Uniprot:E2RP61
Length = 2169
Score = 165 (63.1 bits), Expect = 6.9e-08, Sum P(4) = 6.9e-08
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1931 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1989
Query: 372 -QKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
+K ++GK+TN+ + + E+ D+A + + + + LS+
Sbjct: 1990 IKKLQVKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDLKKRKMEENTSVNLSK 2049
Query: 431 DSSFKSLDKGK 441
SF S+ K K
Sbjct: 2050 QESFTSVKKPK 2060
Score = 59 (25.8 bits), Expect = 6.9e-08, Sum P(4) = 6.9e-08
Identities = 45/229 (19%), Positives = 89/229 (38%)
Query: 35 KTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVN 94
+T+ S + + N+ D R+ K K ++ A E+S+ NS DS + +
Sbjct: 198 QTKSISSGGGNRKCNQEQNKNQPLDARADKIKD-KKPRKKAMESSS----NSDSDSGTSS 252
Query: 95 AESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAE 154
S + SS+ D ED E + + + + + ++ L+ DPK A+
Sbjct: 253 DTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHGMSDPK-AD 311
Query: 155 GLDDNISCVS-RANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSE 213
G R + +SE+ + ++ + P + +Q+ E+
Sbjct: 312 GQKATEKAQEKRIHQPLPLVSESQTHSSFQSQQKQPQVLSQQLPFIFQSSQAKEESVNKH 371
Query: 214 IPSVEKVGASCGSPKVRSPVPDSQSDK--RLVESSSDVLTKVHQKSEAE 260
++ G + K S V ++ + +L+ S DVL K K+ +E
Sbjct: 372 TSVIQSTGL-VSNVKPLSLVNQAKKETYMKLIVPSPDVL-KAGNKNTSE 418
Score = 56 (24.8 bits), Expect = 6.9e-08, Sum P(4) = 6.9e-08
Identities = 21/84 (25%), Positives = 34/84 (40%)
Query: 240 KRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPA 299
K LVE + + ++E ++ E DE D + +E +Q +E D
Sbjct: 585 KSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQ-SE-SDSNSESD 642
Query: 300 ASGDETDESDIMEQDVKVCDICGD 323
G E D+ D +QD D G+
Sbjct: 643 TEGSEEDDDDDKDQDESDSDTEGE 666
Score = 55 (24.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 187 HSSASVCSL-----GPEGLEKAQSSE-KLELSEIPSVEKVGASCGSP-KVRSPVPDSQSD 239
++SA+ C+L G L QS+ + + + S S GSP K SP+P+ Q
Sbjct: 1490 NNSANGCTLSYQNSGKHSLGSIQSTATQSNMEKTDSNNLFSTSSGSPGKFYSPLPNDQLL 1549
Query: 240 KRLVESS 246
K L E +
Sbjct: 1550 KTLTEKN 1556
Score = 52 (23.4 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 25/99 (25%), Positives = 35/99 (35%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L K + + + +
Sbjct: 1244 DKWVVEGKLRKLRIIHAKKTGKRDTSGGIDLGEEQHPLGTPTPGRKRRRKGGDSDFDDDD 1303
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLA 331
D A D+ DE D ++ K DIC D D A
Sbjct: 1304 DDDSDDQADEDDEDEEDKEDKKGKKTDICEDEDEGDQAA 1342
Score = 47 (21.6 bits), Expect = 6.9e-08, Sum P(4) = 6.9e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N ET ++D L F N + F+ +S
Sbjct: 2101 VIKKPMDFSTIREKLSSGQYPNLETFAVDVRLVFD--NCETFNEDDS 2145
Score = 45 (20.9 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 47/250 (18%), Positives = 98/250 (39%)
Query: 32 MGSKTEEFSDE-TCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSV--NSSH 88
M S + SD T +T+ S +++DDL + ++++ + S+ S + S+
Sbjct: 238 MESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSN 297
Query: 89 DSFSVNAESKVTLRSSEISDASEDFEIH---PKFSSRGGTAEGQISPKLEIGLDQRISLN 145
+ ++ S + ++ +++ IH P S + Q K L Q++
Sbjct: 298 NQVLLHGMSDPKADGQKATEKAQEKRIHQPLPLVSESQTHSSFQSQQKQPQVLSQQLPFI 357
Query: 146 KYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSL--GPEGLE-- 201
E ++ + S + ST L N + + + N + + + P+ L+
Sbjct: 358 FQSSQAKEESVNKHTSVIQ-----STGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAG 412
Query: 202 -KAQSSEKLEL-SEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTK----VHQ 255
K S E L SE+ S + +++ S+S K+++ + S+ T H
Sbjct: 413 NKNTSEESSPLTSEMRSKREQYKQTFPAQLKKQ-ESSKSLKKVIAALSNPKTTSSSPAHP 471
Query: 256 KSEAETDRDN 265
K E + N
Sbjct: 472 KQTVENNHPN 481
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 212 SEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDE 271
S+IPS + S + D + D+ + S D ++ S +E+D + E D+
Sbjct: 596 SDIPSSKDSEDSNEDEEEDDEEEDEEDDED--DESDD--SQSESDSNSESDTEGSEEDDD 651
Query: 272 ALKCLDKDKEELTS 285
DKD++E S
Sbjct: 652 D----DKDQDESDS 661
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 1054 EMAKELKKPNEDMCLADQKPLPELPRIP 1081
>UNIPROTKB|F1P2F7 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 IPI:IPI00572336
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 Ensembl:ENSGALT00000020542 ArrayExpress:F1P2F7
Uniprot:F1P2F7
Length = 2125
Score = 168 (64.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1889 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1947
Query: 372 QKQ-DIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
K+ I+GK++N+Q + G E+ A + + +T P K + S + + +
Sbjct: 1948 LKKLQIKGKKSNEQKRGRKLPGDTEDED-SATTSTSLKRGKTEPKKRK-MDESVSVSQGK 2005
Query: 431 DSSFKSLDKGK 441
+F ++ K K
Sbjct: 2006 QENFTAIKKPK 2016
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 56/248 (22%), Positives = 100/248 (40%)
Query: 75 ASEASNPLSVNSSHDSFSVNAE-SKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPK 133
A+ A V S N E +KV L + +D +D + K ++
Sbjct: 132 ATSAGQVKVVTSGAGGRKYNQEQNKVQLLDTR-ADKIKDKKPRKKAVESSSNSDSDSGSS 190
Query: 134 LEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKN--LSHSSAS 191
+ + IS + DD + E +++ S +D S SEN + + KN L HS
Sbjct: 191 SDTS-SEGISSSDSDDLEEDEEEEEDQSAEESEDDESD--SENEAHHEKKNKVLMHSGVK 247
Query: 192 VCSL-GPEGLEKAQSSEKLELSEIPSV-EKVGASCGSPKVRSPVPDSQSDKRLVESSSDV 249
G + EK+Q EK +IP V + S + + P SQ + +SS
Sbjct: 248 DMKTDGQKAHEKSQ--EKRTHQQIPLVSDSQTHSSFQSQQKQPQVLSQQLPFIFQSSQAK 305
Query: 250 LTKVHQKSEAETDRDNGEPPD-EALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDES 308
V++ + + G P+ + L + + K+E + PD+ + A + + ++ES
Sbjct: 306 EESVNKHTSVI--QSTGLVPNVKPLSLVHQTKKEAYLKIIVPPPDLLK--AGNKNTSEES 361
Query: 309 DIMEQDVK 316
+ DV+
Sbjct: 362 IPLISDVR 369
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 43/182 (23%), Positives = 70/182 (38%)
Query: 84 VNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRIS 143
+N S + S A S ++ S A+ ++ S GG Q K+++ LD R
Sbjct: 107 INGSLNGNSTTAASAISTSVLSTSIATSAGQVKVVTSGAGGRKYNQEQNKVQL-LDTRAD 165
Query: 144 LNKYDDP--KGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLE 201
K P K E ++ S ++DTS SE + D +L E E
Sbjct: 166 KIKDKKPRKKAVESSSNSDSDSGSSSDTS---SEGISSSDSDDLEED---------EEEE 213
Query: 202 KAQSSEKLELSEIPSVEKVG-ASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAE 260
+ QS+E+ E E S + + S V D ++D + S + HQ+
Sbjct: 214 EDQSAEESEDDESDSENEAHHEKKNKVLMHSGVKDMKTDGQKAHEKSQE-KRTHQQIPLV 272
Query: 261 TD 262
+D
Sbjct: 273 SD 274
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 235 DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQ 287
D Q+D+ E D K +K+E D D+G+ +++ L+K E+LT Q
Sbjct: 1226 DDQADED-DEDEEDKEDKKGKKAEVCEDEDDGDQT-VSVEELEKQIEKLTKQQ 1276
Score = 50 (22.7 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 257 SEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVK 316
S E+D N + D+ + D + ++ +Q + + S DE DE D +QD
Sbjct: 544 SSKESDDSNDDDDDDEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDEDDEDD-KDQDES 602
Query: 317 VCDICGD 323
D G+
Sbjct: 603 DTDTEGE 609
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 188 SSASVCSLGPEGLEKAQSSEKLELSEI--PSVEKVGASCGSPKVRSPVPDSQSDKRLVES 245
S S+CSL P + SSEK + S + P+ G SP + P Q K L E
Sbjct: 1423 SQNSLCSLQPSVSQS--SSEKSDSSNLFSPTASGTGKFYSSPLI----PSDQLLKTLTEK 1476
Query: 246 S 246
+
Sbjct: 1477 N 1477
Score = 49 (22.3 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 21/91 (23%), Positives = 34/91 (37%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L+ K + + + +
Sbjct: 1162 DKWMVEGKLRNLRIIHAKKTGKRDATGGGEVGEEPHSLETPTPGRKRRRKGGDSDYDDDD 1221
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGD 323
D A D+ DE D ++ K ++C D
Sbjct: 1222 DDDSDDQADEDDEDEEDKEDKKGKKAEVCED 1252
Score = 47 (21.6 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 235 DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEEL-TSTQLAELP 292
D D+ + SD ++ S +E+D D E D+ DKD++E T T+ + P
Sbjct: 558 DEDEDEDDEDDDSDD-SQSESDSNSESDTDGSEDEDDED---DKDQDESDTDTEGEKTP 612
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N E SLD L F N + F+ +S
Sbjct: 2057 VIKKPMDFSTIRDKLTSGQYPNVEAFSLDVRLVFD--NCETFNEDDS 2101
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 254 HQKSEAETDRDNGEPPDE-ALKCLDK-DKEELTSTQLAEL 291
H + E+ R G PP+ + + LD D + L Q E+
Sbjct: 764 HSREESRMRRRKGRPPNVGSTEFLDSTDAKLLRKLQAQEI 803
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 142 ISLNKYDDPKGAEGLDDNISCVSRANDTS-----TALSENNRNMDIKNL 185
I L+K D A G + + S + R ND T L++ RN++ + L
Sbjct: 1765 IRLHKKYDGDSAGGGEGSTSSLERKNDNPLDIAVTRLADLERNIERRYL 1813
Score = 38 (18.4 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 972 EMAKELKKPNEDMCLADQKALPELPRIP 999
>UNIPROTKB|E1C3I8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 IPI:IPI00821728 Ensembl:ENSGALT00000037699
ArrayExpress:E1C3I8 Uniprot:E1C3I8
Length = 2126
Score = 168 (64.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1890 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1948
Query: 372 QKQ-DIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
K+ I+GK++N+Q + G E+ A + + +T P K + S + + +
Sbjct: 1949 LKKLQIKGKKSNEQKRGRKLPGDTEDED-SATTSTSLKRGKTEPKKRK-MDESVSVSQGK 2006
Query: 431 DSSFKSLDKGK 441
+F ++ K K
Sbjct: 2007 QENFTAIKKPK 2017
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 56/248 (22%), Positives = 100/248 (40%)
Query: 75 ASEASNPLSVNSSHDSFSVNAE-SKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPK 133
A+ A V S N E +KV L + +D +D + K ++
Sbjct: 132 ATSAGQVKVVTSGAGGRKYNQEQNKVQLLDTR-ADKIKDKKPRKKAVESSSNSDSDSGSS 190
Query: 134 LEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKN--LSHSSAS 191
+ + IS + DD + E +++ S +D S SEN + + KN L HS
Sbjct: 191 SDTS-SEGISSSDSDDLEEDEEEEEDQSAEESEDDESD--SENEAHHEKKNKVLMHSGVK 247
Query: 192 VCSL-GPEGLEKAQSSEKLELSEIPSV-EKVGASCGSPKVRSPVPDSQSDKRLVESSSDV 249
G + EK+Q EK +IP V + S + + P SQ + +SS
Sbjct: 248 DMKTDGQKAHEKSQ--EKRTHQQIPLVSDSQTHSSFQSQQKQPQVLSQQLPFIFQSSQAK 305
Query: 250 LTKVHQKSEAETDRDNGEPPD-EALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDES 308
V++ + + G P+ + L + + K+E + PD+ + A + + ++ES
Sbjct: 306 EESVNKHTSVI--QSTGLVPNVKPLSLVHQTKKEAYLKIIVPPPDLLK--AGNKNTSEES 361
Query: 309 DIMEQDVK 316
+ DV+
Sbjct: 362 IPLISDVR 369
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 43/182 (23%), Positives = 70/182 (38%)
Query: 84 VNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRIS 143
+N S + S A S ++ S A+ ++ S GG Q K+++ LD R
Sbjct: 107 INGSLNGNSTTAASAISTSVLSTSIATSAGQVKVVTSGAGGRKYNQEQNKVQL-LDTRAD 165
Query: 144 LNKYDDP--KGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLE 201
K P K E ++ S ++DTS SE + D +L E E
Sbjct: 166 KIKDKKPRKKAVESSSNSDSDSGSSSDTS---SEGISSSDSDDLEED---------EEEE 213
Query: 202 KAQSSEKLELSEIPSVEKVG-ASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAE 260
+ QS+E+ E E S + + S V D ++D + S + HQ+
Sbjct: 214 EDQSAEESEDDESDSENEAHHEKKNKVLMHSGVKDMKTDGQKAHEKSQE-KRTHQQIPLV 272
Query: 261 TD 262
+D
Sbjct: 273 SD 274
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 235 DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQ 287
D Q+D+ E D K +K+E D D+G+ +++ L+K E+LT Q
Sbjct: 1227 DDQADED-DEDEEDKEDKKGKKAEVCEDEDDGDQT-VSVEELEKQIEKLTKQQ 1277
Score = 50 (22.7 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 257 SEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVK 316
S E+D N + D+ + D + ++ +Q + + S DE DE D +QD
Sbjct: 544 SSKESDDSNDDDDDDEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDEDDEDD-KDQDES 602
Query: 317 VCDICGD 323
D G+
Sbjct: 603 DTDTEGE 609
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 188 SSASVCSLGPEGLEKAQSSEKLELSEI--PSVEKVGASCGSPKVRSPVPDSQSDKRLVES 245
S S+CSL P + SSEK + S + P+ G SP + P Q K L E
Sbjct: 1424 SQNSLCSLQPSVSQS--SSEKSDSSNLFSPTASGTGKFYSSPLI----PSDQLLKTLTEK 1477
Query: 246 S 246
+
Sbjct: 1478 N 1478
Score = 49 (22.3 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 21/91 (23%), Positives = 34/91 (37%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L+ K + + + +
Sbjct: 1163 DKWMVEGKLRNLRIIHAKKTGKRDATGGGEVGEEPHSLETPTPGRKRRRKGGDSDYDDDD 1222
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGD 323
D A D+ DE D ++ K ++C D
Sbjct: 1223 DDDSDDQADEDDEDEEDKEDKKGKKAEVCED 1253
Score = 47 (21.6 bits), Expect = 3.7e-06, Sum P(3) = 3.6e-06
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 235 DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEEL-TSTQLAELP 292
D D+ + SD ++ S +E+D D E D+ DKD++E T T+ + P
Sbjct: 558 DEDEDEDDEDDDSDD-SQSESDSNSESDTDGSEDEDDED---DKDQDESDTDTEGEKTP 612
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N E SLD L F N + F+ +S
Sbjct: 2058 VIKKPMDFSTIRDKLTSGQYPNVEAFSLDVRLVFD--NCETFNEDDS 2102
Score = 44 (20.5 bits), Expect = 7.2e-06, Sum P(3) = 7.2e-06
Identities = 22/86 (25%), Positives = 35/86 (40%)
Query: 210 ELSEIPSVEKVGASCGSPKVRSPVP--DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGE 267
+L + P V K G K VP + +R + D + H + E+ R G
Sbjct: 722 KLRQYPEVVKKGVQWCLLKEEEVVPCIRAMEGRRGRPPNPD---RQHSREESRMRRRKGR 778
Query: 268 PPDE-ALKCLDK-DKEELTSTQLAEL 291
PP+ + + LD D + L Q E+
Sbjct: 779 PPNVGSTEFLDSTDAKLLRKLQAQEI 804
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 142 ISLNKYDDPKGAEGLDDNISCVSRANDTS-----TALSENNRNMDIKNL 185
I L+K D A G + + S + R ND T L++ RN++ + L
Sbjct: 1766 IRLHKKYDGDSAGGGEGSTSSLERKNDNPLDIAVTRLADLERNIERRYL 1814
Score = 38 (18.4 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 973 EMAKELKKPNEDMCLADQKALPELPRIP 1000
>UNIPROTKB|Q9DE13 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 EMBL:AF224275 IPI:IPI00572336 RefSeq:NP_990008.1
UniGene:Gga.9252 ProteinModelPortal:Q9DE13 SMR:Q9DE13 PRIDE:Q9DE13
GeneID:395400 KEGG:gga:395400 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 NextBio:20815484 Uniprot:Q9DE13
Length = 2130
Score = 168 (64.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1894 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1952
Query: 372 QKQ-DIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
K+ I+GK++N+Q + G E+ A + + +T P K + S + + +
Sbjct: 1953 LKKLQIKGKKSNEQKRGRKLPGDTEDED-SATTSTSLKRGKTEPKKRK-MDESVSVSQGK 2010
Query: 431 DSSFKSLDKGK 441
+F ++ K K
Sbjct: 2011 QENFTAIKKPK 2021
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 56/248 (22%), Positives = 100/248 (40%)
Query: 75 ASEASNPLSVNSSHDSFSVNAE-SKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPK 133
A+ A V S N E +KV L + +D +D + K ++
Sbjct: 137 ATSAGQVKVVTSGAGGRKYNQEQNKVQLLDTR-ADKIKDKKPRKKAVESSSNSDSDSGSS 195
Query: 134 LEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKN--LSHSSAS 191
+ + IS + DD + E +++ S +D S SEN + + KN L HS
Sbjct: 196 SDTS-SEGISSSDSDDLEEDEEEEEDQSAEESEDDESD--SENEAHHENKNKVLMHSGVK 252
Query: 192 VCSL-GPEGLEKAQSSEKLELSEIPSV-EKVGASCGSPKVRSPVPDSQSDKRLVESSSDV 249
G + EK+Q EK +IP V + S + + P SQ + +SS
Sbjct: 253 DMKTDGQKAHEKSQ--EKRTHQQIPLVSDSQTHSSFQSQQKQPQVLSQQLPFIFQSSQAK 310
Query: 250 LTKVHQKSEAETDRDNGEPPD-EALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDES 308
V++ + + G P+ + L + + K+E + PD+ + A + + ++ES
Sbjct: 311 EESVNKHTSVI--QSTGLVPNVKPLSLVHQTKKEAYLKIIVPPPDLLK--AGNKNTSEES 366
Query: 309 DIMEQDVK 316
+ DV+
Sbjct: 367 IPLISDVR 374
Score = 59 (25.8 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 46/183 (25%), Positives = 71/183 (38%)
Query: 84 VNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRIS 143
+N S + S A S ++ S A+ ++ S GG Q K+++ LD R
Sbjct: 112 INGSLNGNSTTAASAISTSVLSTSIATSAGQVKVVTSGAGGRKYNQEQNKVQL-LDTRAD 170
Query: 144 LNKYDDP--KGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLE 201
K P K E ++ S ++DTS SE + D +L E E
Sbjct: 171 KIKDKKPRKKAVESSSNSDSDSGSSSDTS---SEGISSSDSDDLEED---------EEEE 218
Query: 202 KAQSSEKLELSEIPSVEKVGASCGSPKV--RSPVPDSQSDKRLVESSSDVLTKVHQKSEA 259
+ QS+E+ E E S E KV S V D ++D + S + HQ+
Sbjct: 219 EDQSAEESEDDESDS-ENEAHHENKNKVLMHSGVKDMKTDGQKAHEKSQE-KRTHQQIPL 276
Query: 260 ETD 262
+D
Sbjct: 277 VSD 279
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 235 DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQ 287
D Q+D+ E D K +K+E D D+G+ +++ L+K E+LT Q
Sbjct: 1231 DDQADED-DEDEEDKEDKKGKKAEVCEDEDDGDQT-VSVEELEKQIEKLTKQQ 1281
Score = 50 (22.7 bits), Expect = 1.5e-07, Sum P(4) = 1.5e-07
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 257 SEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVK 316
S E+D N + D+ + D + ++ +Q + + S DE DE D +QD
Sbjct: 549 SSKESDDSNDDDDDDEDEDEDDEDDDSDDSQSESDSNSESDTDGSEDEDDEDD-KDQDES 607
Query: 317 VCDICGD 323
D G+
Sbjct: 608 DTDTEGE 614
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 188 SSASVCSLGPEGLEKAQSSEKLELSEI--PSVEKVGASCGSPKVRSPVPDSQSDKRLVES 245
S S+CSL P + SSEK + S + P+ G SP + P Q K L E
Sbjct: 1428 SQNSLCSLQPSVSQS--SSEKSDSSNLFSPTASGTGKFYSSPLI----PSDQLLKTLTEK 1481
Query: 246 S 246
+
Sbjct: 1482 N 1482
Score = 49 (22.3 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 21/91 (23%), Positives = 34/91 (37%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L+ K + + + +
Sbjct: 1167 DKWMVEGKLRNLRIIHAKKTGKRDATGGGEVGEEPHSLETPTPGRKRRRKGGDSDYDDDD 1226
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGD 323
D A D+ DE D ++ K ++C D
Sbjct: 1227 DDDSDDQADEDDEDEEDKEDKKGKKAEVCED 1257
Score = 47 (21.6 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 235 DSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEEL-TSTQLAELP 292
D D+ + SD ++ S +E+D D E D+ DKD++E T T+ + P
Sbjct: 563 DEDEDEDDEDDDSDD-SQSESDSNSESDTDGSEDEDDED---DKDQDESDTDTEGEKTP 617
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N E SLD L F N + F+ +S
Sbjct: 2062 VIKKPMDFSTIRDKLTSGQYPNVEAFSLDVRLVFD--NCETFNEDDS 2106
Score = 43 (20.2 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 142 ISLNKYDDPKGAEGLDDNISCVSRANDTS-----TALSENNRNMDIKNL 185
I L+K D A G + + S + R ND T L++ RN++ + L
Sbjct: 1770 IRLHKKHDGDSAGGGEGSTSSLERKNDNPLDIAVTRLADLERNIERRYL 1818
Score = 41 (19.5 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 254 HQKSEAETDRDNGEPPDE-ALKCLDK-DKEELTSTQLAEL 291
H + E+ R G PP+ + + LD D + L Q E+
Sbjct: 769 HSREESRMRRRKGRPPNVGSTEFLDSTDAKLLRKLQAQEI 808
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 977 EMAKELKKPNEDMCLADQKALPELPRIP 1004
>UNIPROTKB|Q9UIF8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 EMBL:CH471058 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 EMBL:AB032255 EMBL:AB040909 EMBL:AL080173
EMBL:AL834381 EMBL:BC012576 EMBL:AK027612 IPI:IPI00061354
IPI:IPI00220295 IPI:IPI00873703 IPI:IPI00916292 IPI:IPI00929198
PIR:T12495 RefSeq:NP_038478.2 UniGene:Hs.470369 PDB:2E7O PDB:3G0L
PDB:3Q2F PDBsum:2E7O PDBsum:3G0L PDBsum:3Q2F
ProteinModelPortal:Q9UIF8 SMR:Q9UIF8 IntAct:Q9UIF8
MINT:MINT-1483920 STRING:Q9UIF8 PhosphoSite:Q9UIF8 DMDM:229462995
PaxDb:Q9UIF8 PRIDE:Q9UIF8 Ensembl:ENST00000343439
Ensembl:ENST00000355831 Ensembl:ENST00000392782
Ensembl:ENST00000392783 GeneID:29994 KEGG:hsa:29994 UCSC:uc002uao.3
UCSC:uc002uap.3 GeneCards:GC02M160139 H-InvDB:HIX0002531
HGNC:HGNC:963 HPA:HPA019819 MIM:605683 neXtProt:NX_Q9UIF8
PharmGKB:PA25273 InParanoid:Q9UIF8 OMA:DSDDQAD OrthoDB:EOG4WH8JW
BindingDB:Q9UIF8 ChEMBL:CHEMBL1741220 ChiTaRS:BAZ2B
EvolutionaryTrace:Q9UIF8 GenomeRNAi:29994 NextBio:52792
ArrayExpress:Q9UIF8 Bgee:Q9UIF8 CleanEx:HS_BAZ2B
Genevestigator:Q9UIF8 GermOnline:ENSG00000123636 Uniprot:Q9UIF8
Length = 2168
Score = 166 (63.5 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1930 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1988
Query: 372 -QKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
+K ++GK+TN+ + + E+ D+A + + + + + LS+
Sbjct: 1989 IKKLHVKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDLKKRKMEENTSINLSK 2048
Query: 431 DSSFKSLDKGK 441
SF S+ K K
Sbjct: 2049 QESFTSVKKPK 2059
Score = 59 (25.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 51/268 (19%), Positives = 104/268 (38%)
Query: 3 RKNRMRAESGTC-NVCFAPCSSCMHLNLALMGSKTEEFSDETCRETTGS-------QYSI 54
+ NR E G ++ + SS + +N +++ + +T ++G + S
Sbjct: 159 KSNRNGPEKGVNGSINGSNTSSVIGINTSVLSTTASSSMGQTKSTSSGGGNRKCNQEQSK 218
Query: 55 NEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFE 114
N+ D R K K ++ A E+S+ NS DS + + S + SS+ D ED E
Sbjct: 219 NQPLDARVDKIKD-KKPRKKAMESSS----NSDSDSGTSSDTSSEGISSSDSDDLEEDEE 273
Query: 115 IHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALS 174
+ + + + + ++ L+ DPK A+G + L+
Sbjct: 274 EEDQSIEESEDDDSDSESEAQHKSNNQVLLHGISDPK-ADGQKATEKAQEKRIHQPLPLA 332
Query: 175 ENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVP 234
++ ++ + P + +Q+ E+ ++ G + K S V
Sbjct: 333 SESQTHSFQSQQKQPQVLSQQLPFIFQSSQAKEESVNKHTSVIQSTGL-VSNVKPLSLVN 391
Query: 235 DSQSDK--RLVESSSDVLTKVHQKSEAE 260
++ + +L+ S DVL K K+ +E
Sbjct: 392 QAKKETYMKLIVPSPDVL-KAGNKNTSE 418
Score = 55 (24.4 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 185 LSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVE 244
LS+ ++ SLG ++ + +E ++ ++ G+S G K SP+P+ Q K L E
Sbjct: 1498 LSYQNSGKHSLG--SVQSTATQSNVEKADSNNLFNTGSS-GPGKFYSPLPNDQLLKTLTE 1554
Query: 245 SS 246
+
Sbjct: 1555 KN 1556
Score = 55 (24.4 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 35/159 (22%), Positives = 60/159 (37%)
Query: 169 TSTAL-SENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSP 227
T T + S+ N N+ + + S+ V +L G + + S P + G
Sbjct: 511 TKTKMQSKINENIAAASSTPFSSPV-NLSTSGRRTPGNQTPVMPSASPILHSQGKEKAVS 569
Query: 228 KVRSPVPD---SQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELT 284
+PV S K LVE + + ++E ++ E DE D + +E
Sbjct: 570 NNVNPVKTQHHSHPAKSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESD 629
Query: 285 STQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGD 323
+Q +E D G E ++ D +QD D G+
Sbjct: 630 DSQ-SE-SDSNSESDTEGSEEEDDDDKDQDESDSDTEGE 666
Score = 50 (22.7 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N ET +LD L F N + F+ +S
Sbjct: 2100 VIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFD--NCETFNEDDS 2144
Score = 45 (20.9 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 143 SLNKYDDPKGAEGLDDNISCVSRANDTS--TALSENNRNMDI-----KNLSHSSASVCS- 194
S+NK+ + GL N+ +S N T + + D+ KN S S+ + S
Sbjct: 367 SVNKHTSVIQSTGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAGNKNTSEESSLLTSE 426
Query: 195 LGP--EGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVP 234
L E ++A S+ + S++KV A+ +PK S P
Sbjct: 427 LRSKREQYKQAFPSQLKKQESSKSLKKVIAALSNPKATSSSP 468
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 1054 EMAKELKKPNEDMCLADQKPLPELPRIP 1081
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 166 (63.5 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 58/199 (29%), Positives = 90/199 (45%)
Query: 184 NLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
NL S AS+ L L ++ + +IP + V S P R KRL
Sbjct: 149 NLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPSESCPPARRA-------KRLR 201
Query: 244 ESSSDVLTKVHQKSEAETD---RDNG-EPPDEALKCLDKDKEELTSTQLAE----LPDVQ 295
++++ T+ E T R G PP KC + +KE ++ +LAE + +
Sbjct: 202 AEATNIKTE-SDSPEVRTHNLRRRMGCAPP----KC-ENEKETYSAVKLAEKREHAGEQE 255
Query: 296 RFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPE 355
R A + + S + D+ VC +CG ED L +C C D + HT+C+ L VP+
Sbjct: 256 RDKAKARSKKPTSAV---DLYVCLLCGSGNDEDRLLLCDGCDD-SYHTFCLIPPLHDVPK 311
Query: 356 GDWLCEECKFAEETEKQKQ 374
GDW C +C A+E K ++
Sbjct: 312 GDWRCPQC-LAQECNKPQE 329
Score = 48 (22.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 560 KERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSE 619
K+R+ + +SLS L+R+L+ S A + +L EA+ A+N E KV+ SE
Sbjct: 1079 KKRST-KLESLSDLERALSESKDTASAMATLGEARLKEM-EALRSLRAAN--EGKVLCSE 1134
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 379 KRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSSFKSL- 437
KR K+ SGK+ + L++ +R A+ S ++ A L + +SL
Sbjct: 1065 KRKQKKLKEPMPSGKKRSTKLESLSDLER-ALSESKDTASAMATLGEARLKEMEALRSLR 1123
Query: 438 --DKGKV 442
++GKV
Sbjct: 1124 AANEGKV 1130
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1094 GEIRCARPPLEECNLAEGGLGTEVKSSLQATRT 1126
G+ RC + +ECN + G E + RT
Sbjct: 312 GDWRCPQCLAQECNKPQEAFGFEQAARDYTLRT 344
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 544 SPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAV 602
+P+ +L L K V + ER+ L+ + S P+ T ++Q+ + +A+
Sbjct: 1395 TPKKKKLK-LSHTKDVSSSSRMERERERLLEAQRSSESHLVPSDTSFSEQEDSEDEDAI 1452
>UNIPROTKB|F1MCP3 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00733463
Ensembl:ENSBTAT00000046021 Uniprot:F1MCP3
Length = 2110
Score = 157 (60.3 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 36/132 (27%), Positives = 68/132 (51%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1873 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1931
Query: 372 -QKQDIEGKRT-NKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALS 429
+K ++GK++ +K+ +G E+ + ++ ++ ++ + + + + +S
Sbjct: 1932 IKKLHVKGKKSESKKGKKVTLTGDTEDEDSASTSSSLKRGVKDLK--KRKMEENSSINIS 1989
Query: 430 RDSSFKSLDKGK 441
+ SF S+ K K
Sbjct: 1990 KQESFTSVKKPK 2001
Score = 59 (25.8 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 1 MSRKNRMRAESGTCNVCFA---PCSSCMHLNLA---LMGSKTEEF-SDETCRETTGSQYS 53
++ K +M+++ N+ A P SS ++L+ + GS+T S + G + +
Sbjct: 439 LTTKTKMQSKINE-NIATASSTPFSSPVNLSTSGRRTPGSQTTVIPSPSPILHSQGKEKA 497
Query: 54 I-NEADDLRSFKRG-PCNKL-QQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDAS 110
+ N + +++ P L +Q S+ LS S DS E E D S
Sbjct: 498 VSNNVNTVKTQPHSHPAQSLVEQFRGTDSDILSSKDSEDSNEDEEEDDEEDEEDEEDDDS 557
Query: 111 EDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTS 170
+D + +S T EG + DQ S + + K + L+ S V + +
Sbjct: 558 DDSQSESDSNSESDT-EGSEEDD-DDDKDQDESDSDTEGEKTSMKLNKTASSVKSPSISL 615
Query: 171 TALSENNRNMDIKNLSHSS-ASVCS 194
TA S RN+ I S+ A++CS
Sbjct: 616 TAHS-TPRNLHIAKAPGSAPAALCS 639
Score = 59 (25.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 38/163 (23%), Positives = 64/163 (39%)
Query: 169 TSTAL-SENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVG---ASC 224
T T + S+ N N+ + + S+ V +L G S + S P + G A
Sbjct: 441 TKTKMQSKINENIATASSTPFSSPV-NLSTSGRRTPGSQTTVIPSPSPILHSQGKEKAVS 499
Query: 225 GSPKVRSPVPDSQSDKRLVE----SSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDK 280
+ P S + LVE + SD+L+ + E + ++ E +E + D D
Sbjct: 500 NNVNTVKTQPHSHPAQSLVEQFRGTDSDILSSKDSEDSNEDEEEDDEEDEEDEEDDDSDD 559
Query: 281 EELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGD 323
+ S +E D + G E D+ D +QD D G+
Sbjct: 560 SQSESDSNSE-SDTE------GSEEDDDDDKDQDESDSDTEGE 595
Score = 58 (25.5 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 39/182 (21%), Positives = 72/182 (39%)
Query: 83 SVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFS-SRGGTAEGQISPKLEIGLDQR 141
S NS DS + + S + SS+ D ED E S ++ + + + + +
Sbjct: 172 SSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEDQSIEESEDDDSDSETEAQQKS--NNQ 229
Query: 142 ISLNKYDDPKGAEGLDDNISCVS-RANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGL 200
+ L+ DPK AEG R + LSE+ + ++ + P
Sbjct: 230 VLLHGVSDPK-AEGQKATEKAQEKRIHQPLPLLSESQTHSSFQSQQKQPQVLSQQLPFIF 288
Query: 201 EKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDK--RLVESSSDVLTKVHQKSE 258
+ +Q+ E+ ++ G + K S V ++ + +L+ S DVL K K+
Sbjct: 289 QSSQAKEESVNKHTSVIQSTGL-VSNVKPLSLVNQAKKETYMKLIVPSPDVL-KAGNKNT 346
Query: 259 AE 260
+E
Sbjct: 347 SE 348
Score = 51 (23.0 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 185 LSHSSASVCSLGPEGLEKAQSS-EKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
LS+ ++ SLG QS+ EK + + + S +S G K SP+P+ Q K L
Sbjct: 1402 LSYQNSGKQSLGSIQSTATQSNTEKTDSNNLFST----SSSGPGKFYSPLPNDQLLKTLT 1457
Query: 244 ESS 246
E +
Sbjct: 1458 EKN 1460
Score = 50 (22.7 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N ET +LD L F N + F+ +S
Sbjct: 2042 VIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFD--NCETFNEDDS 2086
Score = 47 (21.6 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 24/99 (24%), Positives = 35/99 (35%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L K + + + +
Sbjct: 1148 DKWVVEGKLRKLRIIHAKKTGKRDTSGGIDLGEEQHPLGTPTPGRKRRRKGGDSDYDDDD 1207
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLA 331
D A D+ DE D ++ K +IC D D A
Sbjct: 1208 DDDSDDQADEDDEDEEDKEDKKGKKTEICEDEDEGDQAA 1246
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 958 EMAKELKKPNEDMCLADQKPLPELPRIP 985
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 170 STALSENNRNMDIKNLSHSSAS 191
STA N D NL +S+S
Sbjct: 1417 STATQSNTEKTDSNNLFSTSSS 1438
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 33/193 (17%), Positives = 74/193 (38%)
Query: 32 MGSKTEEFSDE-TCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSV--NSSH 88
M S + SD T +T+ S +++DDL + ++++ + S+ + S+
Sbjct: 169 MESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEED-QSIEESEDDDSDSETEAQQKSN 227
Query: 89 DSFSVNAESKVTLRSSEISDASEDFEIH---PKFSSRGGTAEGQISPKLEIGLDQRISLN 145
+ ++ S + ++ +++ IH P S + Q K L Q++
Sbjct: 228 NQVLLHGVSDPKAEGQKATEKAQEKRIHQPLPLLSESQTHSSFQSQQKQPQVLSQQLPFI 287
Query: 146 KYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSL--GPEGLEKA 203
E ++ + S + ST L N + + + N + + + P+ L+
Sbjct: 288 FQSSQAKEESVNKHTSVIQ-----STGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAG 342
Query: 204 QSSEKLELSEIPS 216
+ E S + S
Sbjct: 343 NKNTSEESSSLTS 355
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 166 (63.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 58/199 (29%), Positives = 90/199 (45%)
Query: 184 NLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
NL S AS+ L L ++ + +IP + V S P R KRL
Sbjct: 160 NLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPSESCPPARRA-------KRLR 212
Query: 244 ESSSDVLTKVHQKSEAETD---RDNG-EPPDEALKCLDKDKEELTSTQLAE----LPDVQ 295
++++ T+ E T R G PP KC + +KE ++ +LAE + +
Sbjct: 213 AEATNIKTE-SDSPEVRTHNLRRRMGCAPP----KC-ENEKETYSAVKLAEKREHAGEQE 266
Query: 296 RFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPE 355
R A + + S + D+ VC +CG ED L +C C D + HT+C+ L VP+
Sbjct: 267 RDKAKARSKKPTSAV---DLYVCLLCGSGNDEDRLLLCDGCDD-SYHTFCLIPPLHDVPK 322
Query: 356 GDWLCEECKFAEETEKQKQ 374
GDW C +C A+E K ++
Sbjct: 323 GDWRCPQC-LAQECNKPQE 340
Score = 48 (22.0 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 560 KERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSE 619
K+R+ + +SLS L+R+L+ S A + +L EA+ A+N E KV+ SE
Sbjct: 1090 KKRST-KLESLSDLERALSESKDTASAMATLGEARLKEM-EALRSLRAAN--EGKVLCSE 1145
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 379 KRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSSFKSL- 437
KR K+ SGK+ + L++ +R A+ S ++ A L + +SL
Sbjct: 1076 KRKQKKLKEPMPSGKKRSTKLESLSDLER-ALSESKDTASAMATLGEARLKEMEALRSLR 1134
Query: 438 --DKGKV 442
++GKV
Sbjct: 1135 AANEGKV 1141
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1094 GEIRCARPPLEECNLAEGGLGTEVKSSLQATRT 1126
G+ RC + +ECN + G E + RT
Sbjct: 323 GDWRCPQCLAQECNKPQEAFGFEQAARDYTLRT 355
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 544 SPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAV 602
+P+ +L L K V + ER+ L+ + S P+ T ++Q+ + +A+
Sbjct: 1406 TPKKKKLK-LSHTKDVSSSSRMERERERLLEAQRSSESHLVPSDTSFSEQEDSEDEDAI 1463
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 166 (63.5 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 58/199 (29%), Positives = 90/199 (45%)
Query: 184 NLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
NL S AS+ L L ++ + +IP + V S P R KRL
Sbjct: 161 NLFQSGASLLCLQKPDLTSDTKDKEYKPHDIPQRQSVQPSESCPPARRA-------KRLR 213
Query: 244 ESSSDVLTKVHQKSEAETD---RDNG-EPPDEALKCLDKDKEELTSTQLAE----LPDVQ 295
++++ T+ E T R G PP KC + +KE ++ +LAE + +
Sbjct: 214 AEATNIKTE-SDSPEVRTHNLRRRMGCAPP----KC-ENEKETYSAVKLAEKREHAGEQE 267
Query: 296 RFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPE 355
R A + + S + D+ VC +CG ED L +C C D + HT+C+ L VP+
Sbjct: 268 RDKAKARSKKPTSAV---DLYVCLLCGSGNDEDRLLLCDGCDD-SYHTFCLIPPLHDVPK 323
Query: 356 GDWLCEECKFAEETEKQKQ 374
GDW C +C A+E K ++
Sbjct: 324 GDWRCPQC-LAQECNKPQE 341
Score = 48 (22.0 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 560 KERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSE 619
K+R+ + +SLS L+R+L+ S A + +L EA+ A+N E KV+ SE
Sbjct: 1091 KKRST-KLESLSDLERALSESKDTASAMATLGEARLKEM-EALRSLRAAN--EGKVLCSE 1146
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 379 KRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSSFKSL- 437
KR K+ SGK+ + L++ +R A+ S ++ A L + +SL
Sbjct: 1077 KRKQKKLKEPMPSGKKRSTKLESLSDLER-ALSESKDTASAMATLGEARLKEMEALRSLR 1135
Query: 438 --DKGKV 442
++GKV
Sbjct: 1136 AANEGKV 1142
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1094 GEIRCARPPLEECNLAEGGLGTEVKSSLQATRT 1126
G+ RC + +ECN + G E + RT
Sbjct: 324 GDWRCPQCLAQECNKPQEAFGFEQAARDYTLRT 356
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 544 SPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAV 602
+P+ +L L K V + ER+ L+ + S P+ T ++Q+ + +A+
Sbjct: 1407 TPKKKKLK-LSHTKDVSSSSRMERERERLLEAQRSSESHLVPSDTSFSEQEDSEDEDAI 1464
>UNIPROTKB|E1BNJ5 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:DAAA02004468 EMBL:DAAA02004469 EMBL:DAAA02004470
IPI:IPI00924289 Ensembl:ENSBTAT00000061234 Uniprot:E1BNJ5
Length = 2169
Score = 157 (60.3 bits), Expect = 6.8e-07, Sum P(4) = 6.8e-07
Identities = 36/132 (27%), Positives = 68/132 (51%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEK 371
+KV C IC E+LL +C C G HTYC + + +P+GDW C C K + +T K
Sbjct: 1932 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLK 1990
Query: 372 -QKQDIEGKRT-NKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALS 429
+K ++GK++ +K+ +G E+ + ++ ++ ++ + + + + +S
Sbjct: 1991 IKKLHVKGKKSESKKGKKVTLTGDTEDEDSASTSSSLKRGVKDLK--KRKMEENSSINIS 2048
Query: 430 RDSSFKSLDKGK 441
+ SF S+ K K
Sbjct: 2049 KQESFTSVKKPK 2060
Score = 59 (25.8 bits), Expect = 6.8e-07, Sum P(4) = 6.8e-07
Identities = 49/205 (23%), Positives = 85/205 (41%)
Query: 1 MSRKNRMRAESGTCNVCFA---PCSSCMHLNLA---LMGSKTEEF-SDETCRETTGSQYS 53
++ K +M+++ N+ A P SS ++L+ + GS+T S + G + +
Sbjct: 509 LTTKTKMQSKINE-NIATASSTPFSSPVNLSTSGRRTPGSQTTVIPSPSPILHSQGKEKA 567
Query: 54 I-NEADDLRSFKRG-PCNKL-QQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDAS 110
+ N + +++ P L +Q S+ LS S DS E E D S
Sbjct: 568 VSNNVNTVKTQPHSHPAQSLVEQFRGTDSDILSSKDSEDSNEDEEEDDEEDEEDEEDDDS 627
Query: 111 EDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTS 170
+D + +S T EG + DQ S + + K + L+ S V + +
Sbjct: 628 DDSQSESDSNSESDT-EGSEEDD-DDDKDQDESDSDTEGEKTSMKLNKTASSVKSPSISL 685
Query: 171 TALSENNRNMDIKNLSHSS-ASVCS 194
TA S RN+ I S+ A++CS
Sbjct: 686 TAHS-TPRNLHIAKAPGSAPAALCS 709
Score = 59 (25.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 38/163 (23%), Positives = 64/163 (39%)
Query: 169 TSTAL-SENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVG---ASC 224
T T + S+ N N+ + + S+ V +L G S + S P + G A
Sbjct: 511 TKTKMQSKINENIATASSTPFSSPV-NLSTSGRRTPGSQTTVIPSPSPILHSQGKEKAVS 569
Query: 225 GSPKVRSPVPDSQSDKRLVE----SSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDK 280
+ P S + LVE + SD+L+ + E + ++ E +E + D D
Sbjct: 570 NNVNTVKTQPHSHPAQSLVEQFRGTDSDILSSKDSEDSNEDEEEDDEEDEEDEEDDDSDD 629
Query: 281 EELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGD 323
+ S +E D + G E D+ D +QD D G+
Sbjct: 630 SQSESDSNSE-SDTE------GSEEDDDDDKDQDESDSDTEGE 665
Score = 58 (25.5 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 39/182 (21%), Positives = 72/182 (39%)
Query: 83 SVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFS-SRGGTAEGQISPKLEIGLDQR 141
S NS DS + + S + SS+ D ED E S ++ + + + + +
Sbjct: 242 SSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEDQSIEESEDDDSDSETEAQQKS--NNQ 299
Query: 142 ISLNKYDDPKGAEGLDDNISCVS-RANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGL 200
+ L+ DPK AEG R + LSE+ + ++ + P
Sbjct: 300 VLLHGVSDPK-AEGQKATEKAQEKRIHQPLPLLSESQTHSSFQSQQKQPQVLSQQLPFIF 358
Query: 201 EKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDK--RLVESSSDVLTKVHQKSE 258
+ +Q+ E+ ++ G + K S V ++ + +L+ S DVL K K+
Sbjct: 359 QSSQAKEESVNKHTSVIQSTGL-VSNVKPLSLVNQAKKETYMKLIVPSPDVL-KAGNKNT 416
Query: 259 AE 260
+E
Sbjct: 417 SE 418
Score = 51 (23.0 bits), Expect = 6.8e-07, Sum P(4) = 6.8e-07
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 185 LSHSSASVCSLGPEGLEKAQSS-EKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
LS+ ++ SLG QS+ EK + + + S +S G K SP+P+ Q K L
Sbjct: 1497 LSYQNSGKQSLGSIQSTATQSNTEKTDSNNLFST----SSSGPGKFYSPLPNDQLLKTLT 1552
Query: 244 ESS 246
E +
Sbjct: 1553 EKN 1555
Score = 50 (22.7 bits), Expect = 6.8e-07, Sum P(4) = 6.8e-07
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N ET +LD L F N + F+ +S
Sbjct: 2101 VIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFD--NCETFNEDDS 2145
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 24/99 (24%), Positives = 35/99 (35%)
Query: 239 DKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLD------KDKEELTSTQLAELP 292
DK +VE L +H K + D G E L K + + + +
Sbjct: 1243 DKWVVEGKLRKLRIIHAKKTGKRDTSGGIDLGEEQHPLGTPTPGRKRRRKGGDSDYDDDD 1302
Query: 293 DVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLA 331
D A D+ DE D ++ K +IC D D A
Sbjct: 1303 DDDSDDQADEDDEDEEDKEDKKGKKTEICEDEDEGDQAA 1341
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 271 EALKCLDKDKEELTSTQLAELPDVQRFP 298
E K L K E++ LP++ R P
Sbjct: 1053 EMAKELKKPNEDMCLADQKPLPELPRIP 1080
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 170 STALSENNRNMDIKNLSHSSAS 191
STA N D NL +S+S
Sbjct: 1512 STATQSNTEKTDSNNLFSTSSS 1533
Score = 38 (18.4 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 33/193 (17%), Positives = 74/193 (38%)
Query: 32 MGSKTEEFSDE-TCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSV--NSSH 88
M S + SD T +T+ S +++DDL + ++++ + S+ + S+
Sbjct: 239 MESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEED-QSIEESEDDDSDSETEAQQKSN 297
Query: 89 DSFSVNAESKVTLRSSEISDASEDFEIH---PKFSSRGGTAEGQISPKLEIGLDQRISLN 145
+ ++ S + ++ +++ IH P S + Q K L Q++
Sbjct: 298 NQVLLHGVSDPKAEGQKATEKAQEKRIHQPLPLLSESQTHSSFQSQQKQPQVLSQQLPFI 357
Query: 146 KYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSL--GPEGLEKA 203
E ++ + S + ST L N + + + N + + + P+ L+
Sbjct: 358 FQSSQAKEESVNKHTSVIQ-----STGLVSNVKPLSLVNQAKKETYMKLIVPSPDVLKAG 412
Query: 204 QSSEKLELSEIPS 216
+ E S + S
Sbjct: 413 NKNTSEESSSLTS 425
>RGD|1311245 [details] [associations]
symbol:Rsf1 "remodeling and spacing factor 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006334
"nucleosome assembly" evidence=IEA;ISO] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA;ISO] [GO:0031213 "RSF complex" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050434
"positive regulation of viral transcription" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1311245 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 OrthoDB:EOG441QBQ
GeneTree:ENSGT00530000064411 IPI:IPI00368441
Ensembl:ENSRNOT00000037050 UCSC:RGD:1311245 Uniprot:D3ZGQ8
Length = 1444
Score = 142 (55.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 37/139 (26%), Positives = 63/139 (45%)
Query: 302 GDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCE 361
G E++E+ ++ D + C CG +L+ +C C G HT C++ L +P+G+W C
Sbjct: 883 GKESEEA-VLPDDDEPCKKCGLPNHPELILLCDSCDSGY-HTACLRPPLMIIPDGEWFCP 940
Query: 362 ECK---FAEETEKQKQDIEGKRTNKQSTSTQSSGKRHA----ENLDAAPAAKRQAIETSP 414
C+ E+ E+Q QD++ K+ + + EN+ P + + E
Sbjct: 941 PCQHKLLCEKLEEQLQDLDVALKKKERAERRKERLVYVGISIENI--IPPQEPEFSEDQE 998
Query: 415 GYPKPLSPSKAAALSRDSS 433
K SKA L R S+
Sbjct: 999 EKKKDAKKSKANVLERRST 1017
Score = 71 (30.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 72/301 (23%), Positives = 123/301 (40%)
Query: 10 ESGTCNVCFAPCSSCMHLNLALMGSKTEEFSDET---CRETTGSQ-YSINEA--DDLRSF 63
ESG C V P L L + G+K ++ S++ C S+ S+ A D LR
Sbjct: 623 ESGLCEVAETP------LPLEMTGAKEKQTSEKKGVDCLSRGSSEGQSLENASPDILR-- 674
Query: 64 KRGPCNKLQQTASEASNPLSV-NSSHDSFSVNAES-KVTLRSSEISDASEDFEIHPKFSS 121
+ ++++ + + V ++S SV K L S S ASE+ EI +
Sbjct: 675 ENSESSRVEMAKLDNAQTSGVEDTSQTKGSVQKNKCKYKLVSEGNSTASENTEITSERKK 734
Query: 122 RGGTAEGQISP-KLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNM 180
G +IS K + +I ++ + K G ++ + V R S +S +
Sbjct: 735 EGIKLTIRISSRKKKPDCPPQIVDSESKEEKA--GKEEEKTSVGRTLRRSPRISRPTAKV 792
Query: 181 -DIKNL-SHSSASVCSLGPEG----LEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVP 234
+I++ + + G EG L+ A E L+ +E + K AS PK +
Sbjct: 793 AEIRDQKADKKRAEGEEGVEGETTSLQTADKKEHLKKAEKDTNSK--ASKVKPKGKVRWT 850
Query: 235 DSQSDKRLVESSSDVLT-KVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPD 293
S++ R SS+D KS A ++ + G+ +EA+ L D E L P+
Sbjct: 851 GSRTRGRWKYSSNDESEGSESDKSSAASEEEEGKESEEAV--LPDDDEPCKKCGLPNHPE 908
Query: 294 V 294
+
Sbjct: 909 L 909
Score = 70 (29.7 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 34/174 (19%), Positives = 72/174 (41%)
Query: 154 EGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKL---E 210
E L+ + C ++ + +S + + ++ + ++ + S LEK S K
Sbjct: 462 EQLETQL-CHTKEDSSSIPAKDGSAGLEGSGVECLNSVLTSTKTSELEKEVSLGKAVDGS 520
Query: 211 LSEIPSVEKVGAS--CGSPKVRSPVPDSQSDKRL-VESSSDVLTKVHQKSEAETDRDNGE 267
S++ S + G G P + P+ S+ L ++S+ K E + + GE
Sbjct: 521 ASDVESHSQKGRGEEPGPPNMDMPLEPSEKTTDLSLKSTLSATESCPTKIEEKAPKSKGE 580
Query: 268 PPDEALKCLDK-DKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDI 320
++CL+K +K + TS D+QR +E + ++ +C++
Sbjct: 581 NHTAGIECLEKVEKAKKTSVD----KDIQRLSPIP-EEVVRGPLESEESGLCEV 629
Score = 65 (27.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 38/157 (24%), Positives = 69/157 (43%)
Query: 164 SRANDTSTALSENNRNMDIKNLSHSSASVCSLGPE-GLEKAQSSEKLELSEIPSVEKVGA 222
SR N+ + A + R+MD + S ++A GP +EKA E ++L I +EK
Sbjct: 251 SRGNEKTEA---DERSMDSRKRSAANALE---GPAVKIEKADEKELVKLPVIVKLEK--- 301
Query: 223 SCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPD--EALKCLDKDK 280
PVP+++ DK+++ SD + + + E +P D +L+ L +
Sbjct: 302 ---------PVPETE-DKKIIREESDSFKENVKPIKVEAKECRVDPKDLKGSLERLGSQE 351
Query: 281 EELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKV 317
E + + Q S +ET++ +Q K+
Sbjct: 352 PERADFG-SNIKSSQDITEKSTEETEKLK-NDQQAKI 386
Score = 45 (20.9 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 49 GSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAES-KVTLRSSEI 106
G I +AD+ K KL++ E + + DSF N + KV + +
Sbjct: 277 GPAVKIEKADEKELVKLPVIVKLEKPVPETEDKKIIREESDSFKENVKPIKVEAKECRV 335
>UNIPROTKB|F1NRS9 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AADN02017093
EMBL:AADN02017094 EMBL:AADN02017095 EMBL:AADN02017096
IPI:IPI00821034 Ensembl:ENSGALT00000037696 ArrayExpress:F1NRS9
Uniprot:F1NRS9
Length = 1981
Score = 174 (66.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 70/304 (23%), Positives = 126/304 (41%)
Query: 142 ISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCS-LGPEGL 200
I +N+ +D + + +N S +A + A+ + +++ + ++ +S V L PE
Sbjct: 1583 IDINENEDNQVTRDVVENWSVEEQAMEVDLAILQQVEDLE-RRVASASLQVKGWLCPE-- 1639
Query: 201 EKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAE 260
A E L E S+ ++ + S +R ++ D+ E
Sbjct: 1640 -PASEREDLVYHEHKSIIRLHKKYDGDSAGGGEGSTSSLERKNDNPLDIAVTRLADLERN 1698
Query: 261 TDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDI 320
+R E L+ K E S L +Q+ + E IM+ C I
Sbjct: 1699 IERRTEEDIAPGLRVWRKALSEARSAAQVALC-IQQLQKSIAWE---KSIMKV---YCQI 1751
Query: 321 CGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEKQKQ-DIE 377
C E+LL +C C G HTYC + + +P+GDW C C K + +T K K+ I+
Sbjct: 1752 CRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKKLQIK 1810
Query: 378 GKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSSFKSL 437
GK++N+Q + G E+ A + + +T P K + S + + + +F ++
Sbjct: 1811 GKKSNEQKRGRKLPGDTEDED-SATTSTSLKRGKTEPKKRK-MDESVSVSQGKQENFTAI 1868
Query: 438 DKGK 441
K K
Sbjct: 1869 KKPK 1872
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N E SLD L F N + F+ +S
Sbjct: 1913 VIKKPMDFSTIRDKLTSGQYPNVEAFSLDVRLVFD--NCETFNEDDS 1957
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 83 SVNSSHDSFSVNAESKVTLRSSEISDASEDFE 114
S NS DS S + S + SS+ D ED E
Sbjct: 46 SSNSDSDSGSSSDTSSEGISSSDSDDLEEDEE 77
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 155 (59.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 163/870 (18%), Positives = 324/870 (37%)
Query: 67 PCNKLQQTASEASNPLSVNSSH--DSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGG 124
PC ++S +S+ +S +SS S S A S SSEIS +SE SS
Sbjct: 90 PCTS-SSSSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSE-----VSSSSEVL 143
Query: 125 TAEGQISPKLEI-GLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIK 183
++ IS E+ ++S + +E + + VS ++ +++ + + ++
Sbjct: 144 SSSEIISSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVV 203
Query: 184 NLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
+ S +S + E + SSE SE+ S +V +S S V S S S +V
Sbjct: 204 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSS--SEIVSSSSEVSSSSSEVV 261
Query: 244 ESSSDVLTK---VHQKSEAETDRDNGEPPDEALKC-LDKDKEELTSTQLAELPDVQRFPA 299
SSS+V + V SE + + + + + E +S+Q+ +V +
Sbjct: 262 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSS 321
Query: 300 ---ASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEG 356
+S E S + +V + ++ S S ++ T E++ E
Sbjct: 322 EVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVT-SSSEIVSSSSEV 380
Query: 357 DWLCEECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGY 416
E + ++ + S+S SS + + + + +++ + +S
Sbjct: 381 SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSE---VSSSS-- 435
Query: 417 PKPLSPSKAAALSRDSSFKSLDKGKVRPVTFGNN-SSNDVVETARSPGGLLPQTTKGTLL 475
+ +S S+ + S + S S V+ + SS+ V ++ + + +
Sbjct: 436 -QVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEV 494
Query: 476 KSSSFSTLNSKAKVKLVDEVVPQKQK-ATRDQASLDVKEGPSRVMXXXXXXXXXXXXXXX 534
SSS ++S ++V EVV + ++ + S + S +
Sbjct: 495 SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSS 554
Query: 535 XXXXXLRALSPRPSRLHDLKGLKQVKERNAFERKS-LSRLDRSLTVSSMATPAS-TPKAD 592
+ + S S + +V + S +S + ++ S + + +S +
Sbjct: 555 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSS 614
Query: 593 QKLTPRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAM 652
+++ E S S S++ E SE S+ S+S + EVS + +S+S+
Sbjct: 615 SEVSSSSEVSSSSEVSSSSEVSS-SSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSE 673
Query: 653 CSSSVEQKPNLVXXXXXXXXXXXXXXXTIVNELVQD-GLPRSVESTNQGEKSSSCRSRPT 711
SSS E +V + V+ Q V S+++ SSS S +
Sbjct: 674 VSSSSE----VVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSS 729
Query: 712 LTAGSKGVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMH 771
+ S V EV E S ++ + + E + +++ ++ +A
Sbjct: 730 EVSSSSEV--SSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSE-VTSSSEVSSSSQATSS 786
Query: 772 KLPGTYGRNKVNDQLDGLGITNMDLNCERSSQDQFSVSNKM----KGAQEVLINKQTTIN 827
+KV+ + IT+ C S+ + S S+++ + EV+ + I+
Sbjct: 787 SSEIISSSSKVSSSSE---ITSSS-ECISSTSEVNSSSSEVVSSSSASSEVVSSSTECIS 842
Query: 828 QLKPALLKISAVPEH--EYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVL---EVVS 882
A+ S V E I EV ++ + + + +C SSK + E +S
Sbjct: 843 SSSEAISSSSQVTSSSTECI-SSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQIS 901
Query: 883 KFPQRIRLKE-VPRVSTWPTMFHESGAKEE 911
E V + S ++ ES EE
Sbjct: 902 SSESTSSCSEFVSKSSEHSSLSSESCPSEE 931
Score = 153 (58.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 125/707 (17%), Positives = 256/707 (36%)
Query: 34 SKTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSV 93
S + E S + E S ++ + ++ S + ++SE S+ V SS + V
Sbjct: 262 SSSSEVSSSS--EVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEV--V 317
Query: 94 NAESKVTLRSSEISDASEDFEIHPKFSSRGG-TAEGQISPKLEIGLDQRISLNKYDDPKG 152
++ S+V SSE+S +SE SS ++ ++S E+ +++ +
Sbjct: 318 SSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSS 377
Query: 153 AEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELS 212
+E + VS +++ S++ + + ++ + S S+S S E + SSE S
Sbjct: 378 SEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSS--SEVSSSSEVSSSSEVSSSS 435
Query: 213 EIPSVEKVGASCGSPKVRSPVPDSQSD---KRLVESSSDVLTKVHQKSEAETDRDNGEPP 269
++ S +V +S S V S S+ V SSS+V + S +E + E
Sbjct: 436 QVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS 495
Query: 270 DEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIME--QDVKVCDICGDAGRE 327
+ + + E +S+++ ++S + + S++ Q + +I +
Sbjct: 496 SSSSEVVSSSSEVSSSSEVVSSSSEV---SSSSEVSSSSEVSSSSQVISSSEIVSSSS-- 550
Query: 328 DLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQSTS 387
++ + S + E++ E E + E Q I S+
Sbjct: 551 EVSSSSSEVVSSSSEVSSSSEVVSSSSEVS-SSSEVSSSSEVSSSSQVISSSEVVSSSSE 609
Query: 388 TQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR---DSSFKSLDKGKVRP 444
SS + + + + +++ + + S S+ + S SS S +V
Sbjct: 610 VVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVS 669
Query: 445 VTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQK-AT 503
+ +SS++VV ++ ++ + SSS ++S V EVV + ++
Sbjct: 670 SSSEVSSSSEVVSSSSEVSSSSEVSSSSEV--SSSSQVISSSEVVSSSSEVVSSSSEVSS 727
Query: 504 RDQASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKGLKQVKERN 563
+ S + S + + S + ++ Q +
Sbjct: 728 SSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSS 787
Query: 564 AFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSEGKGS 623
+ S S++ S ++S + S+ + + E VS SSAS+ + + S
Sbjct: 788 SEIISSSSKVSSSSEITSSSECISS--TSEVNSSSSEVVSSSSASSEVVSSSTECISSSS 845
Query: 624 TLTKSNSTLPRKGLEVSGTPVGALSTSAM--CSSSVEQKPNLVXXXXXXXXXXXXXXXTI 681
S+S + E + +S+S + CSS V
Sbjct: 846 EAISSSSQVTSSSTECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSES 905
Query: 682 VNELVQDGLPRSVESTNQGEKSSSCRSRPTLTAGSKGVLCQKCKEVG 728
+ + + +S E ++ S SC S T T CK G
Sbjct: 906 TSSC-SEFVSKSSEHSSLS--SESCPSEETSTVSETSSETVTCKHHG 949
Score = 151 (58.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 135/739 (18%), Positives = 276/739 (37%)
Query: 34 SKTEEFSDETCRETTGSQYSINEADDLRSFKR-GPCNKLQQTASEASNPLSVNSSHD--- 89
S + E + + T+ S+ + ++ + S +++ ++SE S+ V+SS +
Sbjct: 177 SSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSS 236
Query: 90 SFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDD 149
S V + S++ SSE+S +S E+ S ++E +S E+ +S +
Sbjct: 237 SSQVTSSSEIVSSSSEVSSSSS--EVVSSSSEVSSSSE-VVSSSSEVSSSSEVSSSSEVS 293
Query: 150 PKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGP---EGLEKAQSS 206
+S S+ +S +S ++ + + SS+ V S E + SS
Sbjct: 294 SSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSS 353
Query: 207 EKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNG 266
E SE+ S +V +S S V S S S +V SSS+V + S + +
Sbjct: 354 EVSSSSEVSSSSQVTSS--SEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSS 411
Query: 267 EPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDAGR 326
E + + E +S++++ V +S + S + +V +
Sbjct: 412 EVSSSSE--VSSSSEVSSSSEVSSSSQV----ISSSEVVSSSSEVSSSSEVVSSSSEVSS 465
Query: 327 EDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQST 386
++ S S ++ T E++ E E + ++ + S+
Sbjct: 466 SSEVSSSSEVSSSSQVT-SSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 524
Query: 387 STQSSGKRHAENLDAAPAAK--RQAIETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVRP 444
S SS + + +++ + E S + +S S + S + S +
Sbjct: 525 SEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 584
Query: 445 VTFGN--NSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQKA 502
V+ + +SS+ V+ ++ + + + SSS ++S ++V EV + +
Sbjct: 585 VSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSS--EVSSSSEVSSSSEVSSSSEVS 642
Query: 503 TRDQ--ASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKGLKQVK 560
+ Q +S ++ S V + + S S ++ +V
Sbjct: 643 SSSQVTSSSEIVSSSSEV--SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVS 700
Query: 561 ERNAFERKS--LSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKS 618
+ S +S ++ SS + +S + +++ E S S S++ E S
Sbjct: 701 SSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSS 760
Query: 619 EGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVXXXXXXXXXXXXXX 678
E ++ S+S+ EVS + S+S + SSS + +
Sbjct: 761 E----IISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEV 816
Query: 679 XTIVNELVQDGLPRS--VESTNQGEKSSS--CRSRPTLTAGSKGVLCQKCKEVGH-DVES 733
+ +E+V S V S+ + SSS S +T+ S + + + +V S
Sbjct: 817 NSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECISSSSEVISSSEVTS 876
Query: 734 CPLGSTQVSGIDVSAGRNC 752
C S++V VS+ C
Sbjct: 877 C---SSEV----VSSSETC 888
Score = 144 (55.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 123/686 (17%), Positives = 259/686 (37%)
Query: 34 SKTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASE--ASNPLSVNSSHDSF 91
S + E + + ++ S+ + + ++ + S + Q T+S S+ V SS S
Sbjct: 150 SSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSS--SS 207
Query: 92 SVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQI-SPKLEIGLDQRISLNKYDDP 150
V++ S+V SSE+S +SE SS T+ +I S E+ ++ +
Sbjct: 208 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEV 267
Query: 151 KGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLE 210
+ + + S VS +++ S++ SE + + ++ + S S+S + + + S
Sbjct: 268 SSSSEVVSSSSEVSSSSEVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSS 326
Query: 211 LSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPD 270
SE+ S +V +S S V S S S + V SSS+V + S +E + E
Sbjct: 327 SSEVSSSSEVSSS--SEVVSSSSEVSSSSE--VSSSSEVSSSSQVTSSSEIVSSSSEVSS 382
Query: 271 EALKCLDKDKEELTSTQL-AELPDVQRFP-AASGDETDESDIMEQDVKVCDICGDAGRED 328
+ + + E +S+++ + +V +S E S + +V +
Sbjct: 383 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSE 442
Query: 329 LLAICSRCSDGAEHTYCMKEMLQ--KVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQST 386
+++ S S +E E+ +V + + +E E ++ +
Sbjct: 443 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVV 502
Query: 387 STQSSGKRHAENLDAAPAAKRQA-IETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVRPV 445
S+ S +E + ++ + + +S ++ + SS S +V
Sbjct: 503 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSS 562
Query: 446 TFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQK--AT 503
+ +SS++VV ++ ++ + SSS ++S V EVV + ++
Sbjct: 563 SSEVSSSSEVVSSSSEVSSSSEVSSSSEV--SSSSQVISSSEVVSSSSEVVSSSSEVSSS 620
Query: 504 RDQASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKGLKQVKERN 563
+ +S S V +S S + + +V +
Sbjct: 621 SEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV--VSSSSEVSSSS 678
Query: 564 AFERKSLSRLDRSLTVSSMATPASTPK---ADQKLTPRGEAVSFSS-ASNNREAKVVKSE 619
S S + S VSS + +S+ + + + ++ E VS SS S++ E
Sbjct: 679 EVVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEV 737
Query: 620 GKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVXXXXXXXXXXXXXXX 679
S ++ S+ + S + + + S+S+ +SS E +
Sbjct: 738 SSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKV 797
Query: 680 TIVNELVQDGLPRSVESTNQGEKSSS 705
+ +E+ + ST++ SSS
Sbjct: 798 SSSSEITSSS--ECISSTSEVNSSSS 821
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 155 (59.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 163/870 (18%), Positives = 324/870 (37%)
Query: 67 PCNKLQQTASEASNPLSVNSSH--DSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGG 124
PC ++S +S+ +S +SS S S A S SSEIS +SE SS
Sbjct: 90 PCTS-SSSSSSSSSTVSSSSSEVISSSSEEASSSEITSSSEISSSSE-----VSSSSEVL 143
Query: 125 TAEGQISPKLEI-GLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIK 183
++ IS E+ ++S + +E + + VS ++ +++ + + ++
Sbjct: 144 SSSEIISSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVV 203
Query: 184 NLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
+ S +S + E + SSE SE+ S +V +S S V S S S +V
Sbjct: 204 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSS--SEIVSSSSEVSSSSSEVV 261
Query: 244 ESSSDVLTK---VHQKSEAETDRDNGEPPDEALKC-LDKDKEELTSTQLAELPDVQRFPA 299
SSS+V + V SE + + + + + E +S+Q+ +V +
Sbjct: 262 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSS 321
Query: 300 ---ASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEG 356
+S E S + +V + ++ S S ++ T E++ E
Sbjct: 322 EVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVT-SSSEIVSSSSEV 380
Query: 357 DWLCEECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGY 416
E + ++ + S+S SS + + + + +++ + +S
Sbjct: 381 SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSE---VSSSS-- 435
Query: 417 PKPLSPSKAAALSRDSSFKSLDKGKVRPVTFGNN-SSNDVVETARSPGGLLPQTTKGTLL 475
+ +S S+ + S + S S V+ + SS+ V ++ + + +
Sbjct: 436 -QVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEV 494
Query: 476 KSSSFSTLNSKAKVKLVDEVVPQKQK-ATRDQASLDVKEGPSRVMXXXXXXXXXXXXXXX 534
SSS ++S ++V EVV + ++ + S + S +
Sbjct: 495 SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSS 554
Query: 535 XXXXXLRALSPRPSRLHDLKGLKQVKERNAFERKS-LSRLDRSLTVSSMATPAS-TPKAD 592
+ + S S + +V + S +S + ++ S + + +S +
Sbjct: 555 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSS 614
Query: 593 QKLTPRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAM 652
+++ E S S S++ E SE S+ S+S + EVS + +S+S+
Sbjct: 615 SEVSSSSEVSSSSEVSSSSEVSS-SSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSE 673
Query: 653 CSSSVEQKPNLVXXXXXXXXXXXXXXXTIVNELVQD-GLPRSVESTNQGEKSSSCRSRPT 711
SSS E +V + V+ Q V S+++ SSS S +
Sbjct: 674 VSSSSE----VVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSS 729
Query: 712 LTAGSKGVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMH 771
+ S V EV E S ++ + + E + +++ ++ +A
Sbjct: 730 EVSSSSEV--SSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSE-VTSSSEVSSSSQATSS 786
Query: 772 KLPGTYGRNKVNDQLDGLGITNMDLNCERSSQDQFSVSNKM----KGAQEVLINKQTTIN 827
+KV+ + IT+ C S+ + S S+++ + EV+ + I+
Sbjct: 787 SSEIISSSSKVSSSSE---ITSSS-ECISSTSEVNSSSSEVVSSSSASSEVVSSSTECIS 842
Query: 828 QLKPALLKISAVPEH--EYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVL---EVVS 882
A+ S V E I EV ++ + + + +C SSK + E +S
Sbjct: 843 SSSEAISSSSQVTSSSTECI-SSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQIS 901
Query: 883 KFPQRIRLKE-VPRVSTWPTMFHESGAKEE 911
E V + S ++ ES EE
Sbjct: 902 SSESTSSCSEFVSKSSEHSSLSSESCPSEE 931
Score = 153 (58.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 125/707 (17%), Positives = 256/707 (36%)
Query: 34 SKTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSV 93
S + E S + E S ++ + ++ S + ++SE S+ V SS + V
Sbjct: 262 SSSSEVSSSS--EVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEV--V 317
Query: 94 NAESKVTLRSSEISDASEDFEIHPKFSSRGG-TAEGQISPKLEIGLDQRISLNKYDDPKG 152
++ S+V SSE+S +SE SS ++ ++S E+ +++ +
Sbjct: 318 SSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSS 377
Query: 153 AEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELS 212
+E + VS +++ S++ + + ++ + S S+S S E + SSE S
Sbjct: 378 SEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSS--SEVSSSSEVSSSSEVSSSS 435
Query: 213 EIPSVEKVGASCGSPKVRSPVPDSQSD---KRLVESSSDVLTKVHQKSEAETDRDNGEPP 269
++ S +V +S S V S S+ V SSS+V + S +E + E
Sbjct: 436 QVISSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVS 495
Query: 270 DEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIME--QDVKVCDICGDAGRE 327
+ + + E +S+++ ++S + + S++ Q + +I +
Sbjct: 496 SSSSEVVSSSSEVSSSSEVVSSSSEV---SSSSEVSSSSEVSSSSQVISSSEIVSSSS-- 550
Query: 328 DLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQSTS 387
++ + S + E++ E E + E Q I S+
Sbjct: 551 EVSSSSSEVVSSSSEVSSSSEVVSSSSEVS-SSSEVSSSSEVSSSSQVISSSEVVSSSSE 609
Query: 388 TQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR---DSSFKSLDKGKVRP 444
SS + + + + +++ + + S S+ + S SS S +V
Sbjct: 610 VVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVS 669
Query: 445 VTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQK-AT 503
+ +SS++VV ++ ++ + SSS ++S V EVV + ++
Sbjct: 670 SSSEVSSSSEVVSSSSEVSSSSEVSSSSEV--SSSSQVISSSEVVSSSSEVVSSSSEVSS 727
Query: 504 RDQASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKGLKQVKERN 563
+ S + S + + S + ++ Q +
Sbjct: 728 SSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSS 787
Query: 564 AFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSEGKGS 623
+ S S++ S ++S + S+ + + E VS SSAS+ + + S
Sbjct: 788 SEIISSSSKVSSSSEITSSSECISS--TSEVNSSSSEVVSSSSASSEVVSSSTECISSSS 845
Query: 624 TLTKSNSTLPRKGLEVSGTPVGALSTSAM--CSSSVEQKPNLVXXXXXXXXXXXXXXXTI 681
S+S + E + +S+S + CSS V
Sbjct: 846 EAISSSSQVTSSSTECISSSSEVISSSEVTSCSSEVVSSSETCISSKEMSSSEQISSSES 905
Query: 682 VNELVQDGLPRSVESTNQGEKSSSCRSRPTLTAGSKGVLCQKCKEVG 728
+ + + +S E ++ S SC S T T CK G
Sbjct: 906 TSSC-SEFVSKSSEHSSLS--SESCPSEETSTVSETSSETVTCKHHG 949
Score = 151 (58.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 135/739 (18%), Positives = 276/739 (37%)
Query: 34 SKTEEFSDETCRETTGSQYSINEADDLRSFKR-GPCNKLQQTASEASNPLSVNSSHD--- 89
S + E + + T+ S+ + ++ + S +++ ++SE S+ V+SS +
Sbjct: 177 SSSSEVVSSSSQVTSSSEVVSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSS 236
Query: 90 SFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDD 149
S V + S++ SSE+S +S E+ S ++E +S E+ +S +
Sbjct: 237 SSQVTSSSEIVSSSSEVSSSSS--EVVSSSSEVSSSSE-VVSSSSEVSSSSEVSSSSEVS 293
Query: 150 PKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGP---EGLEKAQSS 206
+S S+ +S +S ++ + + SS+ V S E + SS
Sbjct: 294 SSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSS 353
Query: 207 EKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNG 266
E SE+ S +V +S S V S S S +V SSS+V + S + +
Sbjct: 354 EVSSSSEVSSSSQVTSS--SEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSS 411
Query: 267 EPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDAGR 326
E + + E +S++++ V +S + S + +V +
Sbjct: 412 EVSSSSE--VSSSSEVSSSSEVSSSSQV----ISSSEVVSSSSEVSSSSEVVSSSSEVSS 465
Query: 327 EDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQST 386
++ S S ++ T E++ E E + ++ + S+
Sbjct: 466 SSEVSSSSEVSSSSQVT-SSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 524
Query: 387 STQSSGKRHAENLDAAPAAK--RQAIETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVRP 444
S SS + + +++ + E S + +S S + S + S +
Sbjct: 525 SEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 584
Query: 445 VTFGN--NSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQKA 502
V+ + +SS+ V+ ++ + + + SSS ++S ++V EV + +
Sbjct: 585 VSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSS--EVSSSSEVSSSSEVSSSSEVS 642
Query: 503 TRDQ--ASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKGLKQVK 560
+ Q +S ++ S V + + S S ++ +V
Sbjct: 643 SSSQVTSSSEIVSSSSEV--SSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVS 700
Query: 561 ERNAFERKS--LSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKS 618
+ S +S ++ SS + +S + +++ E S S S++ E S
Sbjct: 701 SSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVTSSSS 760
Query: 619 EGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVXXXXXXXXXXXXXX 678
E ++ S+S+ EVS + S+S + SSS + +
Sbjct: 761 E----IISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKVSSSSEITSSSECISSTSEV 816
Query: 679 XTIVNELVQDGLPRS--VESTNQGEKSSS--CRSRPTLTAGSKGVLCQKCKEVGH-DVES 733
+ +E+V S V S+ + SSS S +T+ S + + + +V S
Sbjct: 817 NSSSSEVVSSSSASSEVVSSSTECISSSSEAISSSSQVTSSSTECISSSSEVISSSEVTS 876
Query: 734 CPLGSTQVSGIDVSAGRNC 752
C S++V VS+ C
Sbjct: 877 C---SSEV----VSSSETC 888
Score = 144 (55.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 123/686 (17%), Positives = 259/686 (37%)
Query: 34 SKTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASE--ASNPLSVNSSHDSF 91
S + E + + ++ S+ + + ++ + S + Q T+S S+ V SS S
Sbjct: 150 SSSSEVVSSSSKVSSSSEATSSSSEIISSSSEVVSSSSQVTSSSEVVSSSSEVVSS--SS 207
Query: 92 SVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQI-SPKLEIGLDQRISLNKYDDP 150
V++ S+V SSE+S +SE SS T+ +I S E+ ++ +
Sbjct: 208 EVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEV 267
Query: 151 KGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLE 210
+ + + S VS +++ S++ SE + + ++ + S S+S + + + S
Sbjct: 268 SSSSEVVSSSSEVSSSSEVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSS 326
Query: 211 LSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPD 270
SE+ S +V +S S V S S S + V SSS+V + S +E + E
Sbjct: 327 SSEVSSSSEVSSS--SEVVSSSSEVSSSSE--VSSSSEVSSSSQVTSSSEIVSSSSEVSS 382
Query: 271 EALKCLDKDKEELTSTQL-AELPDVQRFP-AASGDETDESDIMEQDVKVCDICGDAGRED 328
+ + + E +S+++ + +V +S E S + +V +
Sbjct: 383 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSE 442
Query: 329 LLAICSRCSDGAEHTYCMKEMLQ--KVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQST 386
+++ S S +E E+ +V + + +E E ++ +
Sbjct: 443 VVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVV 502
Query: 387 STQSSGKRHAENLDAAPAAKRQA-IETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVRPV 445
S+ S +E + ++ + + +S ++ + SS S +V
Sbjct: 503 SSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSS 562
Query: 446 TFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQK--AT 503
+ +SS++VV ++ ++ + SSS ++S V EVV + ++
Sbjct: 563 SSEVSSSSEVVSSSSEVSSSSEVSSSSEV--SSSSQVISSSEVVSSSSEVVSSSSEVSSS 620
Query: 504 RDQASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKGLKQVKERN 563
+ +S S V +S S + + +V +
Sbjct: 621 SEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEV--VSSSSEVSSSS 678
Query: 564 AFERKSLSRLDRSLTVSSMATPASTPK---ADQKLTPRGEAVSFSS-ASNNREAKVVKSE 619
S S + S VSS + +S+ + + + ++ E VS SS S++ E
Sbjct: 679 EVVSSS-SEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEV 737
Query: 620 GKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVXXXXXXXXXXXXXXX 679
S ++ S+ + S + + + S+S+ +SS E +
Sbjct: 738 SSSSEVSSSSEVSSSSEVTSSSSEIISSSSSSEVTSSSEVSSSSQATSSSSEIISSSSKV 797
Query: 680 TIVNELVQDGLPRSVESTNQGEKSSS 705
+ +E+ + ST++ SSS
Sbjct: 798 SSSSEITSSS--ECISSTSEVNSSSS 821
>TAIR|locus:2159406 [details] [associations]
symbol:AT5G61110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 SMART:SM00249 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AB006696 EMBL:DQ447099
IPI:IPI00548919 RefSeq:NP_200919.2 UniGene:At.70790
ProteinModelPortal:Q9FNQ4 SMR:Q9FNQ4 EnsemblPlants:AT5G61110.1
GeneID:836232 KEGG:ath:AT5G61110 TAIR:At5g61110 OMA:NQISATH
PhylomeDB:Q9FNQ4 ProtClustDB:CLSN2686720 ArrayExpress:Q9FNQ4
Genevestigator:Q9FNQ4 Uniprot:Q9FNQ4
Length = 161
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/136 (24%), Positives = 52/136 (38%)
Query: 299 AASGDETDESDIMEQDVKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGD 357
A S S+I +VK C++CG + + C C D EH YC + L+ VP
Sbjct: 13 AGSDASLPSSEISFVEVKKPCEVCGSNANDHAIMTCFLCRDTREHIYCARVHLRSVPRM- 71
Query: 358 WLCEECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYP 417
W+CEEC+ ++ + S T N + I + P
Sbjct: 72 WICEECRMNPVVVNNVAPVDQEAAASSSRITYQVADSEVVNQTMTSSDSGNQISATHQQP 131
Query: 418 KPLSPSKAAALSRDSS 433
P + + A+ D+S
Sbjct: 132 -PQAHASPVAVPMDTS 146
>UNIPROTKB|F1STY8 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
GeneTree:ENSGT00530000064411 EMBL:CU633553 EMBL:CU915366
Ensembl:ENSSSCT00000016236 Uniprot:F1STY8
Length = 1344
Score = 149 (57.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 197 PEGLEKAQSSEKL--ELSEIPSVEKVGASCGSPKVRSPVPDSQ-SDKRLVESSSDVLTKV 253
PE EK + + L P + + A ++R D + +++ +E S L K
Sbjct: 664 PEKTEKEEEKTNVGRTLRRSPRISRPTAKVA--EIRDQKADKKRAEEDELEEESAPLQKT 721
Query: 254 HQKSEAET-DRD-NGE----PPDEALKCLD---KDKEELTSTQLAELPDVQRFPAASGDE 304
+K + D+D N + P ++ + + + +S +E D ++ AAS +E
Sbjct: 722 DKKENLKKIDKDTNAKVTKVKPKGKVRWTGSRTRGRWKYSSNDESEGSDSEKSSAASEEE 781
Query: 305 TD-ESD--IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCE 361
+ ES+ I+ D + C CG +L+ +C C G HT C++ L +P+G+W C
Sbjct: 782 EEKESEEAILADDDEPCKKCGLPNHPELILLCDSCDSGY-HTACLRPPLMIIPDGEWFCP 840
Query: 362 ECK---FAEETEKQKQDIE 377
C+ E+ E+Q QD++
Sbjct: 841 PCQHKLLCEKLEEQLQDLD 859
Score = 58 (25.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 361 EECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPL 420
EE F E K + ++ + ST+ QS GK ENL PA K Q + S L
Sbjct: 1250 EEEDF-ENVSKVESPLDYSLVDLPSTNGQSPGKA-IENLIGKPAEKPQTPKDSSTASASL 1307
Query: 421 SPS 423
+P+
Sbjct: 1308 APN 1310
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/105 (25%), Positives = 39/105 (37%)
Query: 364 KFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKR-QAIETSPGYPKPLSP 422
K +E+ E K+ R +ST S E + P+ KR IET +
Sbjct: 1160 KNSEDDELAKKSKRSVRKRGRSTDEYSEADEDEEE-EGKPSRKRLHRIETDEEESCDNAH 1218
Query: 423 SKAAALSRDSSFKSL---DKGKVRPVTFGNNSSNDV--VETARSP 462
AA +RDS + L + RP ++ D V SP
Sbjct: 1219 GDAAQPARDSQPRVLPAEQESTKRPYRIDSDEEEDFENVSKVESP 1263
Score = 49 (22.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 1423 CPSSSNQ---EKISEELLDRKVILKDLESPER 1451
CP ++ EK+ E+L D V LK E ER
Sbjct: 839 CPPCQHKLLCEKLEEQLQDLDVALKKKERAER 870
Score = 45 (20.9 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 361 EECKFAEETEKQKQDIEGKRTN---KQSTSTQSSGKRHAENLDAA 402
+E F+E+ E++K+D + + N ++ST T+ + D A
Sbjct: 889 QEPDFSEDHEEKKKDSKKSKVNLLERRSTRTRKCISYRFDEFDEA 933
>UNIPROTKB|F1P8R2 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050434 "positive regulation of viral
transcription" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006352
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 CTD:51773 KO:K11657 OMA:QPRVLPS
EMBL:AAEX03012787 GeneTree:ENSGT00530000064411 EMBL:AAEX03012788
RefSeq:XP_534002.2 Ensembl:ENSCAFT00000007880 GeneID:476797
KEGG:cfa:476797 Uniprot:F1P8R2
Length = 1434
Score = 149 (57.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 41/150 (27%), Positives = 72/150 (48%)
Query: 243 VESSSDVLTKVHQKSEAE-TDRDNGEP-----PDEALKCLD---KDKEELTSTQLAELPD 293
VE S L K +K + T++D P ++ + + + +S +E D
Sbjct: 804 VEEESAALQKADKKENMKKTEKDTNSKVSKVKPKGKVRWTGSRTRGRWKYSSNDESEASD 863
Query: 294 VQRFPAASGDETD-ESD--IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEML 350
++ AAS +E + ES+ I+ D + C CG +L+ +C C G HT C++ L
Sbjct: 864 SEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELILLCDSCDSGY-HTACLRPPL 922
Query: 351 QKVPEGDWLCEECK---FAEETEKQKQDIE 377
+P+G+W C C+ E+ E+Q QD++
Sbjct: 923 MIIPDGEWFCPPCQHKLLCEKLEEQLQDLD 952
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 146 (56.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 91/402 (22%), Positives = 160/402 (39%)
Query: 81 PLSVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQ 140
P S + DS + +S L SE +S E + + G A+ + E+GL
Sbjct: 80 PPSNSKERDSELSDTDSGCCLGQSESDKSSNSGEAASEADGKAGLADEDTWDETELGL-- 137
Query: 141 RISLNKYDDPKGAE-G--LDDNISCVSR--------ANDTSTALSENNRNMDIKNLSHSS 189
+N+Y D + G + + V+R + TS++ E++ +K +
Sbjct: 138 -YKVNEYVDARDTNMGAWFEAQVVRVTRKAPSQDEPCSSTSSSTPEDDVIYHVKYDDYPE 196
Query: 190 ASVCSLGPEGLE-KAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQS-DKRLVESSS 247
V + + +A++ K + E+ V + + +PK R D++ KR ++
Sbjct: 197 NGVVQMSSRDVRARARNILKWQELEVGQVVMLNYNPDNPKERGFWYDAEILRKRETRTAR 256
Query: 248 DVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRF-PAASGDETD 306
++ V ++ D DE K ++ E + + E P ++ P+ + D
Sbjct: 257 ELYANVRIGGDSLNDC-RIIFVDEVFK-IEHPGE---GSPVIENPMRRKSGPSCKHCKDD 311
Query: 307 ESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVP-EGDWLCEECKF 365
ES V C +CG D +C C D A H YC++ L +P E +W C EC+
Sbjct: 312 ESKTCR--VCACHLCGGKQDPDKQLMCDEC-DMAFHIYCLRPPLSSIPKEDEWYCPECRN 368
Query: 366 -AEETEKQKQDI-EGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPS 423
A E + + E K+ K +++T SS + + + K I S Y P+
Sbjct: 369 DASEVVLAGEKLKESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYG-PIPGI 427
Query: 424 KAAALSRDSSFKSLDKGKVRPVTFG-NNSSNDVVETARSPGG 464
+ R S + G RP G + SND + GG
Sbjct: 428 PVGTMWRFRVQVS-ESGVHRPHVAGIHGRSNDGAYSLVLAGG 468
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 148 (57.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 300 ASGDETDESDIMEQDVKVCDICGDAGREDLLAICS--RCSDGAEHTYCMKEMLQKVPEGD 357
A GD+ D+ D M+Q C C + EDLL +C C++G HTYC +L +VPEG+
Sbjct: 306 AEGDDDDDEDPMDQ--VFCVACNEGKDEDLLLLCDIDGCNNG-RHTYCCDPVLDEVPEGE 362
Query: 358 WLCEECKFAEETE 370
W C +C +E+ +
Sbjct: 363 WRCPKCIESEDAK 375
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 148 (57.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 300 ASGDETDESDIMEQDVKVCDICGDAGREDLLAICS--RCSDGAEHTYCMKEMLQKVPEGD 357
A GD+ D+ D M+Q C C + EDLL +C C++G HTYC +L +VPEG+
Sbjct: 306 AEGDDDDDEDPMDQ--VFCVACNEGKDEDLLLLCDIDGCNNG-RHTYCCDPVLDEVPEGE 362
Query: 358 WLCEECKFAEETE 370
W C +C +E+ +
Sbjct: 363 WRCPKCIESEDAK 375
>UNIPROTKB|F1MLK1 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
EMBL:DAAA02062726 EMBL:DAAA02062727 IPI:IPI00924309
Ensembl:ENSBTAT00000061202 GeneTree:ENSGT00530000064411
Uniprot:F1MLK1
Length = 1355
Score = 147 (56.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 233 VPDSQSDKRL-----VESSSDVLTKVHQKS---EAETDRDNG----EPPDEA--LKCLDK 278
+ D ++DK+ VE S L K +K +AE D ++ +P + +
Sbjct: 708 IRDQKADKKRGEEDEVEEESAALQKTDKKENLKKAEKDTNSKVAKVKPKGKVRWTGSRTR 767
Query: 279 DKEELTSTQLAELPDVQRFPAASGDETD-ESD--IMEQDVKVCDICGDAGREDLLAICSR 335
+ + +S +E D ++ AAS +E + ES+ I+ D + C CG +L+ +C
Sbjct: 768 GRWKYSSNDESEGSDSEKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELILLCDS 827
Query: 336 CSDGAEHTYCMKEMLQKVPEGDWLCEECK---FAEETEKQKQDIE 377
C G HT C++ L +P+G+W C C+ E+ E+Q QD++
Sbjct: 828 CDSGY-HTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLD 871
Score = 54 (24.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 361 EECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPL 420
EE F E K ++ + ST+ QS GK ENL PA K Q + S L
Sbjct: 1261 EEEDF-ENVGKVGSPLDYSLVDLPSTNGQSPGKA-IENLIGKPAEKPQTPKDSSTASASL 1318
Query: 421 SPSKAAALSRDSSFKSLDKGKVRPVT 446
+P+ + +++ D+ ++ VT
Sbjct: 1319 APNGTSG-GQEAGAPEEDEDELLRVT 1343
Score = 45 (20.9 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 361 EECKFAEETEKQKQDIEGKRTN---KQSTSTQSSGKRHAENLDAA 402
+E F+E+ E++K+D + + N ++ST T+ + D A
Sbjct: 901 QEPDFSEDHEEKKKDSKKSKANLLERRSTRTRKCISYRFDEFDEA 945
Score = 41 (19.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 367 EETEKQKQDIEGKRTNKQSTSTQSSGKRHAENL--DA-APAAKRQAIETSPGYPKPLSPS 423
E +E +++ EGK + K+ ++ + +N DA PA RQ P S
Sbjct: 1196 EYSEADEEEEEGKPSRKRLHRIETDEEESCDNAHGDADQPAHDRQP-RVLPSEQD--STK 1252
Query: 424 KAAALSRDSSFKSLDKGKV-RPVTFGNNSSNDVVET-ARSPG 463
K + D + GKV P+ + S D+ T +SPG
Sbjct: 1253 KPYRIDSDEEEDFENVGKVGSPLDY---SLVDLPSTNGQSPG 1291
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 144 (55.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 73/274 (26%), Positives = 114/274 (41%)
Query: 161 SCVSRAN--DTSTALSEN-NRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSV 217
SC S + D+ + E N N + LS S +V L P+ E +L P
Sbjct: 746 SCESSGSLEDSQPPVQEFCNINQESDALSVSKDAV--LQPDAEEIHSDDSPSDLISAPGS 803
Query: 218 EKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTK-----VHQKSEAETDRDNGEPPDEA 272
+ S V S +P Q + VES SDV+++ V + E E+D D+ +
Sbjct: 804 DFQTESTREADVESELP--QESELQVESESDVISEQLPESVLSEQEMESDPDSTAEVNLN 861
Query: 273 LK--CLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLL 330
L+ C + + E+ S Q + +V P ++ES +E + C +C G DLL
Sbjct: 862 LEPEC-EWETEQPVSPQSSGFENVPE-PVVEHQPSEESPEIENE-DFCAVCLIGG--DLL 916
Query: 331 AICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKR--TNKQSTST 388
C RC H C L P GDW+C C+ E+ E + D E + T
Sbjct: 917 C-CDRCPK-VFHLSCHVPPLHSFPVGDWICTLCRDVEQPEVE-YDCENVQMSTGTMPYGL 973
Query: 389 QSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSP 422
+ +R E L + I ++P + +P+SP
Sbjct: 974 SACDQRKCEKLTLLILSN---ILSAP-FHEPVSP 1003
>FB|FBgn0037344 [details] [associations]
symbol:CG2926 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
Prosite:PS00518 EMBL:AE014297 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GO:GO:0000381 HSSP:Q9UIG0
GeneTree:ENSGT00530000063661 FlyBase:FBgn0037344 RefSeq:NP_649554.1
ProteinModelPortal:Q9VNE0 SMR:Q9VNE0 IntAct:Q9VNE0 MINT:MINT-746219
STRING:Q9VNE0 PRIDE:Q9VNE0 EnsemblMetazoa:FBtr0078752 GeneID:40676
KEGG:dme:Dmel_CG2926 UCSC:CG2926-RA InParanoid:Q9VNE0 OMA:YEDLFEP
PhylomeDB:Q9VNE0 GenomeRNAi:40676 NextBio:819988
ArrayExpress:Q9VNE0 Bgee:Q9VNE0 Uniprot:Q9VNE0
Length = 2296
Score = 143 (55.4 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 303 DETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEE 362
DE D + + E++V C+IC RED++ +C C+ G H C+ L ++P G W C+
Sbjct: 232 DEADTAALSEEEVTNCEICESPDREDVMLLCDSCNQGY-HMDCLDPPLYEIPAGSWYCDN 290
Query: 363 CKFAEETEKQKQ 374
C +++ + +Q
Sbjct: 291 CIDSDDEDDNEQ 302
Score = 64 (27.6 bits), Expect = 9.8e-05, Sum P(4) = 9.8e-05
Identities = 45/194 (23%), Positives = 80/194 (41%)
Query: 982 VNCSNSTKHSCFAGSKMVPLDRVITTDNLSLSQNILPKHADKDSAACDTSHNI-----VP 1036
V SN++ ++ G+ + P+D V+ N + + ++ SA +S ++ V
Sbjct: 1928 VTGSNASTNTQAQGNALNPVDLVMALMNKPNQSGSIQQESEVSSAQYISSSSLSLSLGVG 1987
Query: 1037 GSYGPDGTCVTLNENCDNKASSVQLTSLGSQSNSIQHDGRFDSRLLSRAAMTVPLLSGEI 1096
S G G +N D A +T L SN + S ++S ++ +P +S
Sbjct: 1988 SSTGGGGGGAGGGDNHDKTADGKTITVL---SNVLLTS----SSVVS-SSQHIPSISSPT 2039
Query: 1097 RCARPPLEECN-LAEGGLGTEVKSSLQATRTSISCSKGGTSEMNGDASLGEDSSSLKN-F 1154
PP ++ L + G SS + S GGT +G + G S++L + F
Sbjct: 2040 ----PPSKKLTPLPKAGGSVASSSSGVGNIPTTSSGIGGTRNGSGLGNAGGSSNALDDSF 2095
Query: 1155 PVGNEGAHDEGSVD 1168
+ E + GS D
Sbjct: 2096 SMEIESPYSPGSAD 2109
Score = 59 (25.8 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1334 ETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQK 1375
+TSL+R++N G H+Q +P LD A GT+ +
Sbjct: 1027 DTSLERDVNESGSEHEQ-DRSYTPCLDEKNLAEEEEAGTTHQ 1067
Score = 56 (24.8 bits), Expect = 4.1e-05, Sum P(4) = 4.1e-05
Identities = 33/153 (21%), Positives = 60/153 (39%)
Query: 1164 EGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVPDIMESGRDQINLERDLNKGTFDA 1223
E V + P + +LE D+NE + E+ D+ NL + GT
Sbjct: 1009 EAQVSPKRAPSKRPPSKKDTSLERDVNESGSEHEQDRSYTPC-LDEKNLAEEEEAGTTHQ 1067
Query: 1224 DKIPVITKSGRDQINLERDLNESIVDGKIVPDKIKSGRDQINLERDLNEGSVD-AKNVMM 1282
+ + K+ +++ + D E V G + + + + + R + G+ + K+
Sbjct: 1068 NNVSTSPKTRSSKVSGDEDEPEKAV-GTDIQSEDELNNENESPRRSRSRGTANNKKDKSK 1126
Query: 1283 DIVKRVRAR-FNLV----RDLNDRGVTAEKLPD 1310
KR + F V +D N RG +E PD
Sbjct: 1127 SRSKRNKGETFKKVGKRQKDRNYRGDKSE--PD 1157
Score = 55 (24.4 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 1010 LSLSQNILPKHADKDSAACDTSH--NIVPGSYGPDGTCVTLNENCDNKASSV-QLTSLGS 1066
LS S+ + + K S +SH S+ G L D++ +V Q++S G
Sbjct: 454 LSASKRLAEQMGVK-SEGFQSSHLSGGTASSFSLFGNANDLEYFSDSEPDAVSQISSAGL 512
Query: 1067 QSNSIQHDGRFDSRLLSRAAMTVPLLSGEIRCARPP 1102
S ++Q R S + + LL G+ R A PP
Sbjct: 513 GSTAVQTSVRIGS--IGAPRIRKALLQGKARIAAPP 546
Score = 47 (21.6 bits), Expect = 9.8e-05, Sum P(4) = 9.8e-05
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 573 LDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAK 614
LD+ TVS A+ A P + K G V+ S+AS N +A+
Sbjct: 1900 LDQQ-TVSMPASGAIGPGSGDKGESDGAHVTGSNASTNTQAQ 1940
Score = 46 (21.3 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 609 NNR-EAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKP 661
N R A V++ G+T + +STL R + T +T+ ++S +++P
Sbjct: 343 NERIRAAVLRRTRSGAT-SAEDSTLTRTRTRTTTTTTTTTTTTRRTTTSTKKRP 395
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(4) = 0.00024
Identities = 20/85 (23%), Positives = 35/85 (41%)
Query: 543 LSPRPSRLHDLKGLKQVKERNAFE-RKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEA 601
L+P+ ++ K K+ K+ + RK R R+ T + + + L +
Sbjct: 1585 LTPKKTKRKRDKSKKKRKQHQLEKPRKEKKRKRRTQTPEPLPSKEVFASGNNILV----S 1640
Query: 602 VSFSSASNNREAKVVKSEGKGSTLT 626
VSF+ SN A S + S +T
Sbjct: 1641 VSFNKESNTNNASATLSSQQQSVVT 1665
Score = 42 (19.8 bits), Expect = 9.8e-05, Sum P(4) = 9.8e-05
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 364 KFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSP 422
++ + + + G+R N +S S S + + KR++ SP P SP
Sbjct: 1338 RYGRDAMRSHRSRSGRR-NSRSFSRSVSRDSRVSLRSRSGSPKRRSFSMSPTPPPGTSP 1395
Score = 40 (19.1 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 13/47 (27%), Positives = 18/47 (38%)
Query: 611 REAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSV 657
R SEG G L+ S + G++ G LS S S+
Sbjct: 440 RGVATASSEGPGRRLSASKRLAEQMGVKSEGFQSSHLSGGTASSFSL 486
Score = 38 (18.4 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 917 FFAKDFESYGRNY 929
F + F+ YG+NY
Sbjct: 1268 FHNRPFQHYGQNY 1280
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 154 (59.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 209 LELSEIPSVEKVGASCG-SPK--VRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDN 265
L+L E E + SP+ R +P ++ R V+S SD +V++ +E + +
Sbjct: 186 LDLKEKVEAEVLSTDIQPSPERGTRMNIPPKRT--RRVKSQSDS-GEVNRNTELKKLQIF 242
Query: 266 GEPPDEA-LKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDA 324
G P L KDKE+ + + F + D+ VC CG
Sbjct: 243 GAGPKVVGLAVGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRG 302
Query: 325 GREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQ 384
ED L +C C D + HT+C+ L VP+GDW C +C AEE K ++ ++ ++
Sbjct: 303 NNEDKLLLCDGCDD-SYHTFCLLPPLPDVPKGDWRCPKC-VAEECNKPREAFGFEQAIRE 360
Query: 385 STSTQSSGKRHAEN 398
T QS G+ A+N
Sbjct: 361 YT-LQSFGEM-ADN 372
Score = 41 (19.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 545 PRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSF 604
P P RL L QV+ + A R R R+ + S+ Q L+PR + +
Sbjct: 1032 PIPVRLD---ALPQVESQVAAARAWRERTGRTFLKKN-----SSHTLLQVLSPRTDIGVY 1083
Query: 605 SSASNNREAKVVKSE 619
S N R+ K K +
Sbjct: 1084 GSGKNRRKKKKKKKK 1098
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SG+ + L + ++ V + +P I R NL D+ E A+ MMD
Sbjct: 814 SGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 155 (59.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 40/145 (27%), Positives = 71/145 (48%)
Query: 234 PDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPD 293
P ++ KR+ + ++ + + +EA T A KC +++++L S+ E +
Sbjct: 225 PPARRAKRMRAEAMNIKIEPEETAEARTHNLRRRMGCPAPKC--ENEKDLKSSIKQEALE 282
Query: 294 VQRFPAASGDETDESDIMEQ----DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEM 349
+ + S E +S + D+ VC +CG ED L +C C D + HT+C+
Sbjct: 283 KKEYVIESEKEKPKSRAKKTTNAVDLYVCLLCGSGSDEDRLLLCDGCDD-SYHTFCLIPP 341
Query: 350 LQKVPEGDWLCEECKFAEETEKQKQ 374
L VP+GDW C +C A+E K ++
Sbjct: 342 LHDVPKGDWRCPKC-LAQECSKPQE 365
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 704 SSCRSRPTLTAGSKGVLCQKCK 725
+SC + P+++ G + LC C+
Sbjct: 1200 TSCVAVPSISQGPRIWLCPHCR 1221
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 821 NKQTTINQLKPALLKISAVP 840
+ Q T+N+L+ + ++ A+P
Sbjct: 833 HNQLTVNELRQFVTQLYALP 852
>TAIR|locus:2103341 [details] [associations]
symbol:AT3G60520 "AT3G60520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686 EMBL:AL138646
HOGENOM:HOG000239181 ProtClustDB:CLSN2685057 EMBL:BT004575
EMBL:AK227924 IPI:IPI00540693 PIR:T47863 RefSeq:NP_191611.1
UniGene:At.34431 ProteinModelPortal:Q9M207 SMR:Q9M207
EnsemblPlants:AT3G60520.1 GeneID:825223 KEGG:ath:AT3G60520
TAIR:At3g60520 InParanoid:Q9M207 OMA:NRFQHSY PhylomeDB:Q9M207
Genevestigator:Q9M207 Uniprot:Q9M207
Length = 129
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 310 IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCM---KEMLQKVPEGDWLCEECKFA 366
+++ + +VC +CGD G D L CS+C + +H+YC KE + DW C+ C+ A
Sbjct: 1 MVDLERRVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDW-CQ-CE-A 57
Query: 367 EETEKQKQDIEGKRTNKQSTSTQSSG----KRHAENLDAAPAAKRQAIETSPGYPKPLSP 422
+ K + G + + S SS K+ N + + A + G P P
Sbjct: 58 KSRTGAKHGVNGGSSKRSYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGKTGVPSPRPA 117
Query: 423 SKAAALSRD 431
++ L +D
Sbjct: 118 TRRYKLLKD 126
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 154 (59.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 209 LELSEIPSVEKVGASCG-SPK--VRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDN 265
L+L E E + SP+ R +P ++ R V+S SD +V++ +E + +
Sbjct: 186 LDLKEKVEAEVLSTDIQPSPERGTRMNIPPKRT--RRVKSQSDS-GEVNRNTELKKLQIF 242
Query: 266 GEPPDEA-LKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDA 324
G P L KDKE+ + + F + D+ VC CG
Sbjct: 243 GAGPKVVGLAVGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRG 302
Query: 325 GREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQ 384
ED L +C C D + HT+C+ L VP+GDW C +C AEE K ++ ++ ++
Sbjct: 303 NNEDKLLLCDGCDD-SYHTFCLLPPLPDVPKGDWRCPKC-VAEECNKPREAFGFEQAIRE 360
Query: 385 STSTQSSGKRHAEN 398
T QS G+ A+N
Sbjct: 361 YT-LQSFGEM-ADN 372
Score = 39 (18.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 545 PRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSF 604
P P RL L QV+ + A R R R+ + S+ Q L+PR + +
Sbjct: 1032 PIPVRLD---ALPQVESQVAAARAWRERTGRTFLKKN-----SSHTLLQVLSPRTDIGVY 1083
Query: 605 SSASNNREAK 614
S N R+ K
Sbjct: 1084 GSGKNRRKKK 1093
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SG+ + L + ++ V + +P I R NL D+ E A+ MMD
Sbjct: 814 SGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 138 (53.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 29/89 (32%), Positives = 49/89 (55%)
Query: 295 QRFPAASGDETD-ESD--IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQ 351
++ AAS +E + ES+ I+ D + C CG +L+ +C C G HT C++ L
Sbjct: 669 EKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELILLCDSCDSGY-HTACLRPPLM 727
Query: 352 KVPEGDWLCEECK---FAEETEKQKQDIE 377
+P+G+W C C+ E+ E+Q QD++
Sbjct: 728 IIPDGEWFCPPCQHKLLCEKLEEQLQDLD 756
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 151 (58.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 234 PDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPD 293
P ++ KR+ + ++ + + +EA T A KC + DK+ +S + E +
Sbjct: 166 PPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPAPKC-ENDKDVKSSVK-QEPVE 223
Query: 294 VQRFPAASGDETDESDIMEQ----DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEM 349
+ S E +S + D+ VC +CG ED L +C C D + HT+C+
Sbjct: 224 KKECVTESEKEKPKSRAKKTTNAVDLYVCLLCGSGSDEDRLLLCDGCDD-SYHTFCLIPP 282
Query: 350 LQKVPEGDWLCEECKFAEETEKQKQ 374
L VP+GDW C +C A+E K ++
Sbjct: 283 LHDVPKGDWRCPKC-LAQECSKPQE 306
Score = 43 (20.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 704 SSCRSRPTLTAGSKGVLCQKCK 725
+SC + P++ G + LC C+
Sbjct: 1141 TSCVAAPSIPQGPRVWLCPNCR 1162
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 821 NKQTTINQLKPALLKISAVP 840
+ Q T+N+L+ + ++ A+P
Sbjct: 774 HNQLTVNELRQFVTQLHALP 793
>UNIPROTKB|Q96T23 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050434
"positive regulation of viral transcription" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006334 "nucleosome assembly" evidence=IDA;TAS]
[GO:0042393 "histone binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 Reactome:REACT_115566
GO:GO:0045893 GO:GO:0005654 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 EMBL:AP000580 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0042393 GO:GO:0034080 GO:GO:0016584
PROSITE:PS50827 GO:GO:0050434 GO:GO:0043392 eggNOG:NOG79337
GO:GO:0031213 EMBL:AF380176 EMBL:AF227948 EMBL:AP000609
EMBL:AP002343 EMBL:AF059317 EMBL:BC046124 EMBL:AK001268
IPI:IPI00290652 IPI:IPI00514411 IPI:IPI00982445 RefSeq:NP_057662.3
UniGene:Hs.420229 ProteinModelPortal:Q96T23 SMR:Q96T23
IntAct:Q96T23 STRING:Q96T23 PhosphoSite:Q96T23 DMDM:251757329
PaxDb:Q96T23 PRIDE:Q96T23 DNASU:51773 Ensembl:ENST00000308488
Ensembl:ENST00000360355 Ensembl:ENST00000480887 GeneID:51773
KEGG:hsa:51773 UCSC:uc001oym.3 CTD:51773 GeneCards:GC11M077371
H-InvDB:HIX0022742 HGNC:HGNC:18118 HPA:CAB022626 MIM:608522
neXtProt:NX_Q96T23 PharmGKB:PA29210 HOGENOM:HOG000154205
HOVERGEN:HBG105728 InParanoid:Q96T23 KO:K11657 OMA:QPRVLPS
OrthoDB:EOG441QBQ PhylomeDB:Q96T23 ChiTaRS:RSF1 GenomeRNAi:51773
NextBio:55899 Bgee:Q96T23 CleanEx:HS_RSF1 Genevestigator:Q96T23
GermOnline:ENSG00000048649 Uniprot:Q96T23
Length = 1441
Score = 139 (54.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 295 QRFPAASGDETD-ESD--IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQ 351
++ AAS +E + ES+ I+ D + C CG +L+ +C C G HT C++ L
Sbjct: 868 EKSSAASEEEEEKESEEAILADDDEPCKKCGLPNHPELILLCDSCDSGY-HTACLRPPLM 926
Query: 352 KVPEGDWLCEECK---FAEETEKQKQDIEGKRTNKQSTSTQSSGKRHA----ENLDAAPA 404
+P+G+W C C+ E+ E+Q QD++ K+ + + EN+ P
Sbjct: 927 IIPDGEWFCPPCQHKLLCEKLEEQLQDLDVALKKKERAERRKERLVYVGISIENI--IPP 984
Query: 405 AKRQAIETSPGYPKPLSPSKAAALSRDSS 433
+ E K SKA L R S+
Sbjct: 985 QEPDFSEDQEEKKKDSKKSKANLLERRST 1013
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 155 (59.6 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 61/208 (29%), Positives = 94/208 (45%)
Query: 201 EKAQSSEKLELSEIPSV---EKVGASC-GSPKVRSPVPDSQSD---KRL--VESSSDVLT 251
E QS L ++P++ EKV G+ SP P ++ + KR V+S S+
Sbjct: 170 ELFQSGVSLMGVQMPNLDLKEKVEPEVLGTDVQTSPEPGTRMNILPKRTRRVKSQSES-G 228
Query: 252 KVHQKSEAETDRDNGEPPDEA-LKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDI 310
+V++ +E + R G P L KDKE+ S + F +
Sbjct: 229 EVNRNTELKKLRIFGAGPKVVGLAMGAKDKEDEVSRRRKVTNRSDAFNMQMRQRKGTLSV 288
Query: 311 MEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETE 370
D+ VC CG ED L +C C D + HT+C+ L VP+GDW C +C AEE
Sbjct: 289 NFVDLYVCMFCGRGNNEDKLLLCDGCDD-SYHTFCLIPPLPDVPKGDWRCPKC-VAEECN 346
Query: 371 KQKQDIEGKRTNKQSTSTQSSGKRHAEN 398
K ++ ++ ++ T QS G+ A+N
Sbjct: 347 KPREAFGFEQAVREYT-LQSFGEM-ADN 372
Score = 40 (19.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SGR + L + ++ V +P I R NL D+ E A+ MMD
Sbjct: 814 SGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMD 866
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 146 (56.5 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 133/693 (19%), Positives = 242/693 (34%)
Query: 30 ALMGSKTEEFSDETCRETTGSQYSINEA-DDLRSFKRGPCNKLQQTASEASNPLSVNSSH 88
+L S T++ S T ET+ S +A D+ S + P + Q+++S PLS SS
Sbjct: 331 SLPNSSTQDSSSST--ETSFQTESTTDATDESSSTESQPDSTTQESSSSTEGPLSTESST 388
Query: 89 DSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYD 148
+V +S T S + + S+ T S E D +
Sbjct: 389 ---AVTDQSSSTESSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQ----E 441
Query: 149 DPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEK 208
EG S N++S+ +E++++ + S S+ S E S
Sbjct: 442 SSSSTEGPLSTESSTEATNESSS--TESSQDSTTQESSSSTEGPLST-ESSTEATNESSS 498
Query: 209 LELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRD-NGE 267
E S+ + ++ +S P ++ ++ ESS D T Q+S + T+ + E
Sbjct: 499 TESSQDSTTQESSSSSEGPLSTESSTEATNESSSTESSQDSTT---QESSSSTESPLSTE 555
Query: 268 PPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDE-TDESDIMEQDVKVCDICGDAGR 326
P EA + + + ++TQ + S E T+ES E +
Sbjct: 556 PSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATNESSSTESSQDSTTQESSSST 615
Query: 327 EDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQST 386
E L+ S ++G+ + + + E + E + + +++ ST
Sbjct: 616 EGPLSTESS-TEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQDST 674
Query: 387 STQSSGKRHAENLDAAP---AAKRQAIETSP-GYPKPLSPSKAAALSRDSSFKSLDKGKV 442
+ +SS L P A + + E+S + S S LS +SS ++ +
Sbjct: 675 TQESSSSTEGP-LSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSST 733
Query: 443 RPVTFGNNSSNDVVETARSPGGLLPQT--TKGTLLKSSSFSTL---NSKAKVKLVDEVVP 497
+ ++++ + + SP P T + + +SS ST +S + L E
Sbjct: 734 E--SSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPST 791
Query: 498 QKQKATRDQASLD--VKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPSRLHDLKG 555
+ +++ ++S D +E S + + S +
Sbjct: 792 EANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTE-DP 850
Query: 556 LKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKV 615
L A S + + T ++ P + + T G S S+ S+
Sbjct: 851 LSTESSTEATYESSSTESSQDSTTQESSSSTEGPLSTESST-EGSNESSSTESSQDSTTQ 909
Query: 616 VKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVE---QKPNLVXXXXXXXX 672
S S L+ ST + E S T ST+ SSS E +
Sbjct: 910 ESSSSTESPLSTEPST---EANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSST 966
Query: 673 XXXXXXXTIVNELVQDGLPRSVESTNQGEKSSS 705
T + +G P S ES+ +G SS
Sbjct: 967 ESSQDSTTQESSSSTEG-PLSTESSTEGSNESS 998
Score = 144 (55.7 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 138/741 (18%), Positives = 270/741 (36%)
Query: 34 SKTEEFSDETCRETTGS-------QYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNS 86
S TE D T +E++ S + S ++ S + + Q+++S PLS S
Sbjct: 395 SSTESSQDSTTQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQESSSSTEGPLSTES 454
Query: 87 SHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNK 146
S ++ + ++ ++ + + S ++S E P S+ T S E D
Sbjct: 455 STEATNESSSTESS-QDSTTQESSSSTE-GP-LSTESSTEATNESSSTESSQDSTTQ--- 508
Query: 147 YDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSS 206
+ +EG S N++S+ +E++++ + S S+ S S P +A S
Sbjct: 509 -ESSSSSEGPLSTESSTEATNESSS--TESSQDSTTQESSSSTESPLSTEPS--TEANES 563
Query: 207 EKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKS-------EA 259
E S+ + ++ +S P ++ ++ ESS D T+ S E+
Sbjct: 564 SSTESSQDSTTQESSSSTEDPLSTESSTEATNESSSTESSQDSTTQESSSSTEGPLSTES 623
Query: 260 ETDRDNGEPPDEALKCLDKDKEEL-TSTQLAELPDVQRFPAASGDETDESDIMEQDVKVC 318
T+ N E+ + K T + L+ P + ++S + + +S E
Sbjct: 624 STEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTE 683
Query: 319 DICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEG 378
G E S + +E EG E A E+ + +
Sbjct: 684 ---GPLSTEPSTEANESSSTESSQDSTTQESSSS-SEGPLSTESSTEANESSSTESS-QD 738
Query: 379 KRTNKQSTSTQS--SGKRHAENLDAAPAAKRQ---AIETSPGYPKPLSPSKAAALSRDSS 433
T + S+ST+S S + E +++ Q E+S PLS + + SS
Sbjct: 739 STTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPSTEANESSS 798
Query: 434 FKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFST---LNSKAKVK 490
+S + + + + + ++++ + + SS ST L++++ +
Sbjct: 799 TESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTE 858
Query: 491 LVDEV--VPQKQKATRDQASLDVKEGPSRVMXXXXXXXXXXXXXXXXXXXXLRALSPRPS 548
E Q +T ++S EGP + S S
Sbjct: 859 ATYESSSTESSQDSTTQESSSST-EGPLSTESSTEGSNESSSTESSQDSTTQESSSSTES 917
Query: 549 RLHDLKGLKQVKERNAFE--RKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSS 606
L + + E ++ E + S ++ S T ++T +ST + T + +
Sbjct: 918 PL-STEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSSTESSQDSTTQE 976
Query: 607 ASNNREAKV-VKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVX 665
+S++ E + +S +GS +S+ST + + S T + ST + S+ + N
Sbjct: 977 SSSSTEGPLSTESSTEGSN--ESSST---ESSQDSTTQESSSSTESPLSTEPSTEANESS 1031
Query: 666 XXXXXXXXXXXXXXTIVNELVQDGLPRSVESTNQGEKSSSCRSRPTLTAGS--KGVLC-Q 722
+ + S E++N+ + S + T + S +G L +
Sbjct: 1032 STESSQDSTTQESSSSTEGPLST--ESSTEASNESSSTESSQDSTTQESSSSTEGPLSTE 1089
Query: 723 KCKEVGHD---VESCPLGSTQ 740
EV + ES P STQ
Sbjct: 1090 SSTEVTQEPSPTESLPNSSTQ 1110
Score = 47 (21.6 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 28/116 (24%), Positives = 47/116 (40%)
Query: 1048 LNENCDNKASSVQLTSLGSQSNSIQHDGRFDSRLLSRAAMTVPLLSGEIRCARPPL--EE 1105
L+ + S+ ++ SQ ++ Q LS T S ++ E
Sbjct: 985 LSTESSTEGSNESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQES 1044
Query: 1106 CNLAEGGLGTEVKSSLQATRTSISCSKGGTSEMNGDASLGEDSSSLKNFPVGNEGA 1161
+ EG L TE SS +A+ S S +E + D++ E SSS + P+ E +
Sbjct: 1045 SSSTEGPLSTE--SSTEASNESSS------TESSQDSTTQESSSSTEG-PLSTESS 1091
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 36/161 (22%), Positives = 63/161 (39%)
Query: 1018 PKHADKDSAACDTSHNIVP--GSYGPDGTCVTLNENCDNKASSVQLTSLGSQSNSIQHDG 1075
P +S++ ++S + S +G T + N++SS + SQ ++ Q
Sbjct: 923 PSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEANESSSTE----SSQDSTTQESS 978
Query: 1076 RFDSRLLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRTSISCSKGGT 1135
LS + T S E ++ E TE S L +T S ++ +
Sbjct: 979 SSTEGPLSTESSTEG--SNESSSTESS-QDSTTQESSSSTE--SPL-STEPSTEANESSS 1032
Query: 1136 SEMNGDASLGEDSSSLK-------NFPVGNEGAHDEGSVDS 1169
+E + D++ E SSS + + NE + E S DS
Sbjct: 1033 TESSQDSTTQESSSSTEGPLSTESSTEASNESSSTESSQDS 1073
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 1147 DSSSLKNFPVGNEGAHDEGSVDSGKVP-GI 1175
++S+LK+ P G H E D +P GI
Sbjct: 1293 ETSTLKS-PTGTTPGHQEDRTDCSNMPNGI 1321
Score = 40 (19.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 8/52 (15%), Positives = 19/52 (36%)
Query: 1512 GPLEKNNNQDRPPDKGADKGAEEDIXXXXXXXXXFPFPDKEQTSVKPASKTE 1563
GPL ++ + + + + +++ P + T +S TE
Sbjct: 983 GPLSTESSTEGSNESSSTESSQDSTTQESSSSTESPLSTEPSTEANESSSTE 1034
Score = 38 (18.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 1512 GPLEKNNNQDRPPDKGADKGAEEDIXXXXXXXXXFPFPDKEQTSV-KPASKTEQL 1565
GPL ++ + + + + +++ P + T V + S TE L
Sbjct: 1050 GPLSTESSTEASNESSSTESSQDSTTQESSSSTEGPLSTESSTEVTQEPSPTESL 1104
Score = 37 (18.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 1129 SCSKGGTSEMNGDASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVP-GIMKC 1178
S S+ G + G ++ +S + P E D G+ S P G C
Sbjct: 1214 SGSESGITSTTGAPYTTDNPASQEPSPSAPENPGDSGNSSSESPPEGATPC 1264
>MGI|MGI:1309478 [details] [associations]
symbol:Baz1a "bromodomain adjacent to zinc finger domain 1A"
species:10090 "Mus musculus" [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008623 "CHRAC" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1309478 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006261
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
HOGENOM:HOG000095179 HOVERGEN:HBG080889 OMA:SSFQNNV
OrthoDB:EOG49GKFR GO:GO:0008623 InterPro:IPR004022
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
PROSITE:PS50827 PROSITE:PS51136 EMBL:AC138767 EMBL:AC154732
EMBL:CT030142 EMBL:AK135668 EMBL:AK166955 EMBL:AF033664
IPI:IPI00896695 UniGene:Mm.479583 IntAct:O88379 STRING:O88379
PhosphoSite:O88379 PaxDb:O88379 PRIDE:O88379
Ensembl:ENSMUST00000038926 UCSC:uc007nnz.2
GeneTree:ENSGT00660000095335 InParanoid:O88379 Bgee:O88379
CleanEx:MM_BAZ1A Genevestigator:O88379
GermOnline:ENSMUSG00000035021 Uniprot:O88379
Length = 1555
Score = 128 (50.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C IC G + + +C C G HTYC++ L+ VP+GDW C EC+
Sbjct: 1152 CKICRKKGDAENMVLCDGCDRG-HHTYCVRPKLKAVPDGDWFCPECR 1197
Score = 60 (26.2 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 228 KVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQ 287
K R + ++RL + K+ ++ E E R+ E LK K +E++
Sbjct: 347 KKREELKKMVEEERLKKKEEKERLKIEREKEREKLREEKRKYMEYLKQWSKPREDMECDD 406
Query: 288 LAELPD 293
L ELP+
Sbjct: 407 LKELPE 412
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 33/149 (22%), Positives = 62/149 (41%)
Query: 369 TEKQKQDIEGKRTNKQSTST-QSSGKRHAENLD---AAPAAKRQAIET---SPGY-PKPL 420
+ Q+QD G+ ++ ST +++ K ++NL +AP + +++ S + P L
Sbjct: 1285 SRSQRQD-PGRYPSRSQQSTPKNTAKSASKNLRKTRSAPPTETRSLRVGSRSTRHSPSAL 1343
Query: 421 SPSKAAALSRDSSFKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSF 480
LS S + KG + +N V T+RS L+P T +L S
Sbjct: 1344 QDVFVELLSPHSKRRGR-KGADHTPEHSPSFTNFRVSTSRSSRQLIPLNTAESLSLQHSE 1402
Query: 481 STLNSKAKVKLVDEVVPQKQKATRDQASL 509
S + + VP ++++ Q +
Sbjct: 1403 SKRRGRKRQSTESSPVPLNRRSSGRQGGV 1431
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 154 (59.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 209 LELSEIPSVEKVGASCG-SPK--VRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDN 265
L+L E E + SP+ R +P ++ R V+S SD +V++ +E + +
Sbjct: 186 LDLKEKVEAEVLSTDIQPSPERGTRMNIPPKRT--RRVKSQSDS-GEVNRNTELKKLQIF 242
Query: 266 GEPPDEA-LKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDA 324
G P L KDKE+ + + F + D+ VC CG
Sbjct: 243 GAGPKVVGLAVGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRG 302
Query: 325 GREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQ 384
ED L +C C D + HT+C+ L VP+GDW C +C AEE K ++ ++ ++
Sbjct: 303 NNEDKLLLCDGCDD-SYHTFCLLPPLPDVPKGDWRCPKC-VAEECNKPREAFGFEQAVRE 360
Query: 385 STSTQSSGKRHAEN 398
T QS G+ A+N
Sbjct: 361 YT-LQSFGEM-ADN 372
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SG+ + L + ++ V + +P I R NL D+ E A+ MMD
Sbjct: 814 SGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 154 (59.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 209 LELSEIPSVEKVGASCG-SPK--VRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDN 265
L+L E E + SP+ R +P ++ R V+S SD +V++ +E + +
Sbjct: 186 LDLKEKVEAEVLSTDIQPSPERGTRMNIPPKRT--RRVKSQSDS-GEVNRNTELKKLQIF 242
Query: 266 GEPPDEA-LKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDA 324
G P L KDKE+ + + F + D+ VC CG
Sbjct: 243 GAGPKVVGLAVGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRG 302
Query: 325 GREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDIEGKRTNKQ 384
ED L +C C D + HT+C+ L VP+GDW C +C AEE K ++ ++ ++
Sbjct: 303 NNEDKLLLCDGCDD-SYHTFCLLPPLPDVPKGDWRCPKC-VAEECNKPREAFGFEQAIRE 360
Query: 385 STSTQSSGKRHAEN 398
T QS G+ A+N
Sbjct: 361 YT-LQSFGEM-ADN 372
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SG+ + L + ++ V + +P I R NL D+ E A+ MMD
Sbjct: 814 SGKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMD 866
>DICTYBASE|DDB_G0282427 [details] [associations]
symbol:DDB_G0282427 "HMG1/2 (high mobility group)
box-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 dictyBase:DDB_G0282427 Pfam:PF00505
EMBL:AAFI02000047 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 RefSeq:XP_640043.1 ProteinModelPortal:Q54SJ6
EnsemblProtists:DDB0220651 GeneID:8623570 KEGG:ddi:DDB_G0282427
InParanoid:Q54SJ6 OMA:YMNINRE Uniprot:Q54SJ6
Length = 795
Score = 133 (51.9 bits), Expect = 0.00015, P = 0.00015
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKF 365
D K C++C D+G ++ + C C G HT+C+ L + PEG W C +C F
Sbjct: 614 DCKSCELCDDSGHDEKMLFCDVCDKGY-HTFCLTPPLSQTPEGGWRCNDCAF 664
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 145 (56.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 57/208 (27%), Positives = 94/208 (45%)
Query: 201 EKAQSSEKLELSEIPSV---EKVGASCGSPKVR-SPVPDSQSD---KRL--VESSSDVLT 251
E QS L ++P++ EKV S ++ SP P ++ + KR ++ S+
Sbjct: 170 ELFQSGVSLMGVQMPNLDLKEKVEPEVLSTDIQTSPEPGTRMNILPKRTRRIKCQSES-G 228
Query: 252 KVHQKSEAETDRDNGEPPDEALKCLD-KDKEELTSTQLAELPDVQRFPAASGDETDESDI 310
+V++ +E + R G P + K+KE+ S + F +
Sbjct: 229 EVNRNTELKKLRIFGAGPKVVGLAMGVKEKEDEVSRRRKVTNRSDAFNMQMRQRKGTLSV 288
Query: 311 MEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETE 370
D+ VC CG ED L +C C D + HT+C+ L VP+GDW C +C AEE
Sbjct: 289 NFVDLYVCMFCGRGNNEDKLLLCDGCDD-SYHTFCLIPPLPDVPKGDWRCPKC-VAEECN 346
Query: 371 KQKQDIEGKRTNKQSTSTQSSGKRHAEN 398
K ++ ++ ++ T QS G+ A+N
Sbjct: 347 KPREAFGFEQAVREYT-LQSFGEM-ADN 372
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 557 KQVKERNAFERKSLSRLDRSLTVS-SMATPASTP-KADQKLTPRGEAVSFSSASNNREAK 614
+ ++E ++ K + + S ++ ++ P K+++ +T A SF + A
Sbjct: 1348 EDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIPIKSEEVVTHMWTAPSFCAEHAYSSAS 1407
Query: 615 VVKSEGKGSTLTKSNSTLPRK 635
S+GKGS+ + PRK
Sbjct: 1408 KSCSQGKGSSTPRKQ---PRK 1425
Score = 39 (18.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 1253 VPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLPDIV 1312
+P I R NL D+ E A+ MMD ++ ++ D+ + E LP++
Sbjct: 837 LPCVISQARQVKNLLDDVEEFHERAQEAMMDETPD-SSKLQMLIDMGS-SLYVE-LPELA 893
Query: 1313 KSDRDQIDLERDLKEGRYMN 1332
+ L+++L++ R+++
Sbjct: 894 R-------LKQELQQARWLD 906
Score = 39 (18.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 30/128 (23%), Positives = 48/128 (37%)
Query: 586 ASTPKADQKLTPRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGL-EVSGTPV 644
A KA +G SF ++ NR A V S + + T + + E G +
Sbjct: 1299 AELQKAAANPDLQGHLPSFQPSAFNRVASSVSSSPRQTADYDDEETDSDEDIRETYGYDM 1358
Query: 645 GALSTSAMCSSSVEQKPNLVXXXXXXXXXXXXXXX--TIVNELVQDGLPRSVESTNQGEK 702
+ S SSS+E PNL T + + + +S +QG+
Sbjct: 1359 KD-TASVKSSSSLE--PNLFCDEEIPIKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGKG 1415
Query: 703 SSSCRSRP 710
SS+ R +P
Sbjct: 1416 SSTPRKQP 1423
>ZFIN|ZDB-GENE-010328-16 [details] [associations]
symbol:baz1b "bromodomain adjacent to zinc finger
domain, 1B" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004715 "non-membrane spanning protein
tyrosine kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA;ISS] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA;ISS] [GO:0016572 "histone
phosphorylation" evidence=ISS] [GO:0035173 "histone kinase
activity" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 ZFIN:ZDB-GENE-010328-16 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:BX950182
EMBL:CU326349 IPI:IPI00998609 Ensembl:ENSDART00000128582
Uniprot:E7EYG7
Length = 1802
Score = 147 (56.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 92/405 (22%), Positives = 166/405 (40%)
Query: 78 ASNPLSVNS--SHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLE 135
ASN +S SH+S K + D +DF+ + G E ++ +L+
Sbjct: 977 ASNDISQQGAPSHESSIETTVPKQGQNLWFVCDTPKDFDELLESLHPQGVRESELKIRLQ 1036
Query: 136 IGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSL 195
I Q I + + KG GL +C D L + R+ DI ++ S L
Sbjct: 1037 INY-QEILHSIHLTKKGNPGLK---TC-----DGHQELLKFLRS-DIIEVA-SRLQKGGL 1085
Query: 196 GPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSD--KRLVESSSDVLTKV 253
G LE E+ E + ++EK+ P+ V Q K+ ++ K
Sbjct: 1086 GY--LEDTSEFEEFE-ERVKTLEKL------PEFGECVIALQESVIKKFLQGFMAPKQKK 1136
Query: 254 HQKSEAETDRDNGEPPDEALKCLDKDKE----ELTSTQLAELPDVQRFPAASG--DETDE 307
+K+ E + E D+ K ++ + E T + E R G D +
Sbjct: 1137 KKKTGGE-ESTTAEEVDDQKKLAEEARVATAVEKWKTAVREAQTFSRMHVLLGMLDACIK 1195
Query: 308 SDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK--F 365
D+ ++ + C +C G +D L +C C+ A H +C++ L ++P G+WLC C+
Sbjct: 1196 WDMSAENAR-CKVCRRKGEDDKLILCDECNK-AFHLFCLRPALYRIPAGEWLCPACQPTI 1253
Query: 366 AEETEK---QKQDIEGKRTNKQSTSTQSSGK-RHAENLDAAPAAK-RQAIETSPG---YP 417
A + + K+D E + +++ +S + E+ + + + R+ ++TS
Sbjct: 1254 ARRSSRGRNYKEDSEEEEDSEEEDEEESEEEDSEEEHRNTGHSLRSRKKVKTSSKSKMQK 1313
Query: 418 KPLSPSKAAALSRDSS-FKSLDKGKVRPVTFGNNSSN-DVVETAR 460
KP P+ +A D++ K+ K +P + SS D+ E R
Sbjct: 1314 KPAKPASRSASKTDTNPSKTSPKSSAKPKSRAAPSSPVDIDELVR 1358
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 1305 AEKLPDIVKSDRDQIDLERDLKEGRYMNAETSL-DRNLNFKGLNHQQFHHGNSPHLDLM 1362
AE D++ S D ++ K Y +A + D L F N ++++ +S L M
Sbjct: 1400 AEDYQDVITSPMDLTTMQGKFKSSEYHSASDFIEDMKLIFS--NAEEYNQPSSNVLTCM 1456
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/264 (18%), Positives = 92/264 (34%)
Query: 1132 KGGTSEMNGDASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNE 1191
K G + D+S KN + + E D + R Q N ++
Sbjct: 1507 KNGKQGKKASSKRKVDNSRRKNTKRNKDDSESEEDEDEDDEEEDDERSRKQRNGKQSKKA 1566
Query: 1192 GSFDVEKVPDIMESGRDQINLERDLNKGTFDADKIPVITKSG-RDQINLERDL-NESIVD 1249
S E + R++ + E + + + D+ G + Q N ++D N S
Sbjct: 1567 SSRRKEDNSRRKNTKRNKDDSESEEEEDDDEEDEEEEEDDEGSKKQKNGKQDKKNSSRKK 1626
Query: 1250 GKIVPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLP 1309
G K +D+ + D E +K KR + + ++ N R ++
Sbjct: 1627 GNSRQRNTKRNKDESEDDEDDEEEEERSKKQKNG--KRSKKASSRRKEDNSRRKNTKRNK 1684
Query: 1310 DIVKSDRDQIDLERDLKEGRYMNAETSLDRNL--NFKGLNHQQFHHGNSPHLDLMETAAA 1367
D +S+ D + E D K + N + + +R N + +Q + D E
Sbjct: 1685 DDSESEEDDDEEEEDEKMKKQKNRKQTTNRRKQDNSRQKKTKQNKDDSESEEDDDEDEPV 1744
Query: 1368 SSCGTSQKMPWNEAFLDGESSSKK 1391
+ + ++E D E S++
Sbjct: 1745 RKSKRTNRKDYHEQDSDSEQDSRR 1768
>DICTYBASE|DDB_G0291444 [details] [associations]
symbol:DDB_G0291444 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0291444 Pfam:PF05022 EMBL:AAFI02000177
InterPro:IPR007718 RefSeq:XP_635213.1 STRING:Q54EM7
EnsemblProtists:DDB0183896 GeneID:8628159 KEGG:ddi:DDB_G0291444
eggNOG:NOG140707 InParanoid:Q54EM7 OMA:TICEESS Uniprot:Q54EM7
Length = 447
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 52/253 (20%), Positives = 114/253 (45%)
Query: 35 KTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVN 94
K E+ S ++ +++ S+ ++++D + + K + ++S + + +SS +S
Sbjct: 77 KVEKDSSDSS-DSSDSESDSSDSEDEKEKEMKVDKKTEDSSSSSESDTESSSSSESEDEK 135
Query: 95 AESKVTLRSS----EISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDP 150
+ K + SS E +S + E SS +E + K E D S ++ +
Sbjct: 136 KKEKESDDSSSSESESDSSSSESESESSESSSSSESESEDEKKKESS-DSSDSESEDEKK 194
Query: 151 KGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSE-KL 209
K E D + S S ++D+S + SE+ + +++ SS+ S + + SS+ +
Sbjct: 195 KKVESSDSS-SSESESSDSSDSESEDEKKKKVESSDSSSSESESSSSSSSDSSDSSDSES 253
Query: 210 ELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPP 269
E + VEK S + S D + DK+ + K ++ + ++D+ E
Sbjct: 254 EDEKKKKVEKSSDKETSSESESEDSDDEKDKKKSKKEDKKENKKQEEKKKPIEKDSDEDS 313
Query: 270 DEALKCLDKDKEE 282
D+ +K +++ K++
Sbjct: 314 DDEMKVVEQPKKQ 326
Score = 123 (48.4 bits), Expect = 0.00078, P = 0.00078
Identities = 69/292 (23%), Positives = 129/292 (44%)
Query: 35 KTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVN 94
K EF + + ++E ++ +S K+ K +S++S+ S +SS
Sbjct: 45 KLIEFYINENKSKDNKKRPLDEKEEEKSSKKHKVEKDSSDSSDSSDSES-DSSDSEDEKE 103
Query: 95 AESKVTLRSSEISDASE-DFEIHPKFSS---RGGTAEGQISPKLEIGLDQRISLNKYDDP 150
E KV ++ + S +SE D E S + E S E D S ++ +
Sbjct: 104 KEMKVDKKTEDSSSSSESDTESSSSSESEDEKKKEKESDDSSSSESESDSSSSESESESS 163
Query: 151 KGAEGLDDNISCVSR--ANDTSTALSENNRNMDIKNL-SHSSASVCSLGPEGLEKAQSSE 207
+ + + + ++D+S + SE+ + +++ S SS S S + + + +
Sbjct: 164 ESSSSSESESEDEKKKESSDSSDSESEDEKKKKVESSDSSSSESESSDSSDSESEDEKKK 223
Query: 208 KLELSEIPSVEKVGASCGSPKVRSPVPDSQSD---KRLVESSSDVLTKVHQKSEAETDRD 264
K+E S+ S E +S S S DS+S+ K+ VE SSD T SE+E++ D
Sbjct: 224 KVESSDSSSSESESSSSSSSD-SSDSSDSESEDEKKKKVEKSSDKETS----SESESE-D 277
Query: 265 NGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVK 316
+ + D+ K +DK+E + + P +++ + D DE ++EQ K
Sbjct: 278 SDDEKDKK-KSKKEDKKENKKQEEKKKP-IEK--DSDEDSDDEMKVVEQPKK 325
>DICTYBASE|DDB_G0282711 [details] [associations]
symbol:DDB_G0282711 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 dictyBase:DDB_G0282711 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG79337 RefSeq:XP_640220.1
ProteinModelPortal:Q54S19 EnsemblProtists:DDB0216408 GeneID:8623760
KEGG:ddi:DDB_G0282711 InParanoid:Q54S19 OMA:EREYNDE Uniprot:Q54S19
Length = 1361
Score = 143 (55.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 39/155 (25%), Positives = 69/155 (44%)
Query: 303 DETDESDIMEQDVKVCDICGDAGREDLLAICS--RCSDGAEHTYCMKEMLQKVPEGDWLC 360
+ETD S+ +++ VC C ED + +C CS G H YC++ + VP+GDW+C
Sbjct: 309 EETDSSEEFLENL-VCSSCNTGKDEDKILLCDTDNCSRGY-HMYCLRYPITSVPKGDWIC 366
Query: 361 EECKFAEETEK--QKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPK 418
+ C+F + + D E N Q + K+ + + +R+ + +
Sbjct: 367 DFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERE 426
Query: 419 PLSPSKAAALSRDSSFKSLDKGKVRPVTFGNNSSN 453
K + SSF ++ K+ + G+N SN
Sbjct: 427 RERREKEKKDALRSSFSNIPIPKINNIN-GSNGSN 460
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 209 LELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEP 268
L+ ++IP E +SC + + ++ KR ++ + K ++K+ + D DN +
Sbjct: 32 LQSTKIPRGEWYCSSCEIER-----KNKKNKKRKLDGAG----KKNKKNNKDDDDDNDDD 82
Query: 269 PDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESD 309
DE D+D E+ E D + D+ +E +
Sbjct: 83 DDEGEN--DEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEE 121
Score = 47 (21.6 bits), Expect = 0.00035, Sum P(5) = 0.00035
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 874 SSKVLEV----VS--KFPQRIRLKEVPRVSTWPTMFHESGAKE-ENIALYFFAKDFESYG 926
+SK LE+ VS P+ IR + + + ST P+ + GA + N AL F + +
Sbjct: 899 TSKTLELSFNQVSFDNLPKPIRDEFITKSST-PSTCLDIGAIDLPNSALLIFLPEIPNQS 957
Query: 927 RNYKILVDSMMKNDLALMGNLDG-IELLIFP 956
Y +++ ++N +A +L + L I+P
Sbjct: 958 SLYHLIIH-FIENRVAGFIDLSNDLSLYIYP 987
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 441 KVRPVTFGNNSSNDV 455
+++P T NN++ND+
Sbjct: 1103 QLQPTTNNNNNNNDI 1117
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(5) = 0.00035
Identities = 14/67 (20%), Positives = 29/67 (43%)
Query: 597 PRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSS 656
P+ ++ S+ SN+ + G G + +K + S P+ + ++S+ SS+
Sbjct: 448 PKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSS--SST 505
Query: 657 VEQKPNL 663
P L
Sbjct: 506 TSSPPPL 512
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1234 RDQINLERDLNESIVDGKIVPDKIKSGRDQINLERDLN 1271
+ Q ++ + +D K + DK+ S D NL+ L+
Sbjct: 796 QQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLS 833
Score = 38 (18.4 bits), Expect = 0.00035, Sum P(5) = 0.00035
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 983 NCSNSTKHSCFAGSKMVPLDRVITT 1007
N S K+ C+ G + +++++T+
Sbjct: 1032 NQSFDIKNICYIGINHISMNKILTS 1056
>UNIPROTKB|F1MG25 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00906306
Ensembl:ENSBTAT00000027534 Uniprot:F1MG25
Length = 1456
Score = 137 (53.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 39/129 (30%), Positives = 58/129 (44%)
Query: 315 VKV-CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
+KV C IC E+LL +C C G HTYC + + +P+GDW C C A+ + Q
Sbjct: 1219 MKVYCQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPAC-IAKSLKSQ- 1275
Query: 374 QDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSS 433
I K K S T K H + + + K + + + S S +++L R
Sbjct: 1276 --ITQKHQLKASGQTLKIKKLHVKG-KKSESKKGKKVTLTGDTEDEDSASTSSSLKR--G 1330
Query: 434 FKSLDKGKV 442
K L K K+
Sbjct: 1331 VKDLKKRKM 1339
Score = 51 (23.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 185 LSHSSASVCSLGPEGLEKAQSS-EKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLV 243
LS+ ++ SLG QS+ EK + + + S +S G K SP+P+ Q K L
Sbjct: 814 LSYQNSGKQSLGSIQSTATQSNTEKTDSNNLFST----SSSGPGKFYSPLPNDQLLKTLT 869
Query: 244 ESS 246
E +
Sbjct: 870 EKN 872
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 1311 IVKSDRDQIDLERDLKEGRYMNAET-SLDRNLNFKGLNHQQFHHGNS 1356
++K D + L G+Y N ET +LD L F N + F+ +S
Sbjct: 1384 VIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFD--NCETFNEDDS 1428
>UNIPROTKB|Q9NRL2 [details] [associations]
symbol:BAZ1A "Bromodomain adjacent to zinc finger domain
protein 1A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008623 "CHRAC" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0016590 "ACF complex" evidence=TAS] [GO:0004402
"histone acetyltransferase activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0006261 GO:GO:0006338 EMBL:CH471078
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000228 EMBL:AF213467 EMBL:AF221130
EMBL:AB032252 EMBL:AL121603 EMBL:AL355885 EMBL:AF161435
EMBL:AL050089 IPI:IPI00383565 IPI:IPI00412415 PIR:T08738
RefSeq:NP_038476.2 RefSeq:NP_872589.1 UniGene:Hs.509140
ProteinModelPortal:Q9NRL2 SMR:Q9NRL2 IntAct:Q9NRL2
MINT:MINT-1183777 STRING:Q9NRL2 PhosphoSite:Q9NRL2 DMDM:116241266
PaxDb:Q9NRL2 PRIDE:Q9NRL2 Ensembl:ENST00000358716
Ensembl:ENST00000360310 Ensembl:ENST00000382422 GeneID:11177
KEGG:hsa:11177 UCSC:uc001wsk.3 UCSC:uc001wsl.3 CTD:11177
GeneCards:GC14M035221 H-InvDB:HIX0037904 HGNC:HGNC:960
HPA:HPA002730 MIM:605680 neXtProt:NX_Q9NRL2 PharmGKB:PA25270
HOGENOM:HOG000095179 HOVERGEN:HBG080889 InParanoid:Q9NRL2 KO:K11655
OMA:SSFQNNV OrthoDB:EOG49GKFR PhylomeDB:Q9NRL2 ChiTaRS:BAZ1A
GenomeRNAi:11177 NextBio:42529 ArrayExpress:Q9NRL2 Bgee:Q9NRL2
CleanEx:HS_BAZ1A Genevestigator:Q9NRL2 GermOnline:ENSG00000198604
GO:GO:0016590 GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136 Uniprot:Q9NRL2
Length = 1556
Score = 133 (51.9 bits), Expect = 0.00033, P = 0.00033
Identities = 34/91 (37%), Positives = 46/91 (50%)
Query: 276 LDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDV--KVCDICGDAGREDLLAIC 333
LD+ +E L S+ A L V F S D S I + + C IC G + + +C
Sbjct: 1113 LDRWRESLLSS--ASLSQV--FLHLS--TLDRSVIWSKSILNARCKICRKKGDAENMVLC 1166
Query: 334 SRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C G HTYC++ L+ VPEGDW C EC+
Sbjct: 1167 DGCDRG-HHTYCVRPKLKTVPEGDWFCPECR 1196
>UNIPROTKB|J9P3J2 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03004244 EMBL:AAEX03004243
Ensembl:ENSCAFT00000046112 Uniprot:J9P3J2
Length = 1392
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 255 QKSEAETDRDNGEPPDEALKCLDKDKE----ELTSTQLAELPDVQRFPAASG--DETDES 308
+K ++E D E DE K ++ K E T + E R G D +
Sbjct: 1029 RKLQSE-DSAKTEEVDEEKKLAEEAKVASALEKWKTAIREAQTFSRMHVLLGMLDACIKW 1087
Query: 309 DIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEE 368
D+ ++ + C +C G +D L +C C+ A H +C++ L +VP+G+W C C+ A
Sbjct: 1088 DMSAENAR-CKVCRKKGEDDKLILCDECNK-AFHLFCLRPALYEVPDGEWQCPACQPATA 1145
Query: 369 TEKQKQDIEGKRTNKQSTSTQSSGKRHAE 397
+++ G+ ++S S S E
Sbjct: 1146 ----RRNSRGRNYTEESASEDSEDDESEE 1170
Score = 58 (25.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 208 KLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNG 266
K+ + +I +EKV K SDK E+SS + + HQK EA D G
Sbjct: 41 KVRIVKIHPLEKVDEEATEKKSDGACDSPSSDK---ENSSQI-AQDHQKKEAIVKEDEG 95
>UNIPROTKB|E2RED7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:AAEX03004244
EMBL:AAEX03004243 Ensembl:ENSCAFT00000020881 Uniprot:E2RED7
Length = 1482
Score = 129 (50.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 255 QKSEAETDRDNGEPPDEALKCLDKDKE----ELTSTQLAELPDVQRFPAASG--DETDES 308
+K ++E D E DE K ++ K E T + E R G D +
Sbjct: 1119 RKLQSE-DSAKTEEVDEEKKLAEEAKVASALEKWKTAIREAQTFSRMHVLLGMLDACIKW 1177
Query: 309 DIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEE 368
D+ ++ + C +C G +D L +C C+ A H +C++ L +VP+G+W C C+ A
Sbjct: 1178 DMSAENAR-CKVCRKKGEDDKLILCDECNK-AFHLFCLRPALYEVPDGEWQCPACQPATA 1235
Query: 369 TEKQKQDIEGKRTNKQSTSTQSSGKRHAE 397
+++ G+ ++S S S E
Sbjct: 1236 ----RRNSRGRNYTEESASEDSEDDESEE 1260
Score = 58 (25.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 208 KLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNG 266
K+ + +I +EKV K SDK E+SS + + HQK EA D G
Sbjct: 131 KVRIVKIHPLEKVDEEATEKKSDGACDSPSSDK---ENSSQI-AQDHQKKEAIVKEDEG 185
>UNIPROTKB|J9PAU7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
EMBL:AAEX03004244 EMBL:AAEX03004243 Ensembl:ENSCAFT00000046458
Uniprot:J9PAU7
Length = 1485
Score = 129 (50.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 38/149 (25%), Positives = 66/149 (44%)
Query: 255 QKSEAETDRDNGEPPDEALKCLDKDKE----ELTSTQLAELPDVQRFPAASG--DETDES 308
+K ++E D E DE K ++ K E T + E R G D +
Sbjct: 1122 RKLQSE-DSAKTEEVDEEKKLAEEAKVASALEKWKTAIREAQTFSRMHVLLGMLDACIKW 1180
Query: 309 DIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEE 368
D+ ++ + C +C G +D L +C C+ A H +C++ L +VP+G+W C C+ A
Sbjct: 1181 DMSAENAR-CKVCRKKGEDDKLILCDECNK-AFHLFCLRPALYEVPDGEWQCPACQPATA 1238
Query: 369 TEKQKQDIEGKRTNKQSTSTQSSGKRHAE 397
+++ G+ ++S S S E
Sbjct: 1239 ----RRNSRGRNYTEESASEDSEDDESEE 1263
Score = 58 (25.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 208 KLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNG 266
K+ + +I +EKV K SDK E+SS + + HQK EA D G
Sbjct: 134 KVRIVKIHPLEKVDEEATEKKSDGACDSPSSDK---ENSSQI-AQDHQKKEAIVKEDEG 188
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 33/123 (26%), Positives = 52/123 (42%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK---FAEETEKQKQ 374
C CG +L+ +C C G HT C++ L +P+G+W C C+ E+ E+Q Q
Sbjct: 3 CKKCGLPNHPELILLCDSCDSGY-HTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQ 61
Query: 375 DIEGKRTNKQSTSTQSSGKRHA----ENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSR 430
D++ K+ + + EN+ P + E K SKA L R
Sbjct: 62 DLDVALKKKERAERRKERLVYVGISIENI--IPPQEPDFSEDQEEKKKDSKKSKANLLER 119
Query: 431 DSS 433
S+
Sbjct: 120 RST 122
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 139 (54.0 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 294 VQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKV 353
+++ P + ++ + E+D C++CG + RED L +C C D H C+ LQ+V
Sbjct: 167 LKKIPVENTRACEDEEAEEEDPTFCEVCGRSDREDRLLLCDGC-DAGYHMECLDPPLQEV 225
Query: 354 PEGDWLCEEC 363
P +W C EC
Sbjct: 226 PVDEWFCPEC 235
Score = 58 (25.5 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 571 SRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVV---KSEGKGSTLTK 627
S LD T+ ++AT ST + LTPR A A R KV+ K+ + S +K
Sbjct: 312 SLLDE--TIEAVATGLSTAVYQRPLTPRVPAKRKRKAG--RRKKVLGRKKTRSRSSVKSK 367
Query: 628 SNSTLPRK 635
S T +K
Sbjct: 368 SGGTRAKK 375
Score = 45 (20.9 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 103 SSEI-SDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPK---GAEGLDD 158
SSE+ SDA E H + S T Q + ++ L++ +DP+ G+E +D
Sbjct: 24 SSELASDAEESSNGHSE-DSEDDTGSEQDD---DTDGEETEGLSEEEDPEDRSGSEDSED 79
Query: 159 NISCVSRANDTSTALSENNR-NMD 181
I + A +T L ++ N D
Sbjct: 80 GIEVPTAAVETQRKLEASSTPNSD 103
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 1152 KNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVP 1200
KN G+ D D K+P I K R N +D S ++P
Sbjct: 663 KNIAPGHPQKTDPRRPDFSKLPRIPKIRRDGSNSTQDQAPASGQTVELP 711
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 139 (54.0 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 294 VQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKV 353
+++ P + ++ + E+D C++CG + RED L +C C D H C+ LQ+V
Sbjct: 167 LKKIPVENTRACEDEEAEEEDPTFCEVCGRSDREDRLLLCDGC-DAGYHMECLDPPLQEV 225
Query: 354 PEGDWLCEEC 363
P +W C EC
Sbjct: 226 PVDEWFCPEC 235
Score = 58 (25.5 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 571 SRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVV---KSEGKGSTLTK 627
S LD T+ ++AT ST + LTPR A A R KV+ K+ + S +K
Sbjct: 312 SLLDE--TIEAVATGLSTAVYQRPLTPRVPAKRKRKAG--RRKKVLGRKKTRSRSSVKSK 367
Query: 628 SNSTLPRK 635
S T +K
Sbjct: 368 SGGTRAKK 375
Score = 45 (20.9 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 103 SSEI-SDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPK---GAEGLDD 158
SSE+ SDA E H + S T Q + ++ L++ +DP+ G+E +D
Sbjct: 24 SSELASDAEESSNGHSE-DSEDDTGSEQDD---DTDGEETEGLSEEEDPEDRSGSEDSED 79
Query: 159 NISCVSRANDTSTALSENNR-NMD 181
I + A +T L ++ N D
Sbjct: 80 GIEVPTAAVETQRKLEASSTPNSD 103
Score = 42 (19.8 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 1152 KNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVP 1200
KN G+ D D K+P I K R N +D S ++P
Sbjct: 663 KNIAPGHPQKTDPRRPDFSKLPRIPKIRRDGSNSTQDQAPASGQTVELP 711
>UNIPROTKB|E1BN25 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008623 "CHRAC" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
GO:GO:0006261 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 EMBL:DAAA02052733 EMBL:DAAA02052734
IPI:IPI00713138 Ensembl:ENSBTAT00000026857 Uniprot:E1BN25
Length = 1427
Score = 141 (54.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 71/311 (22%), Positives = 126/311 (40%)
Query: 68 CNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAE 127
C +L Q ++ S+ + +S++ + S S+ F P+ S+ +
Sbjct: 768 CEQLDQLIEALNSRGHRESALKETLLQEKSRICAQLSRFSEEKFHFSDKPQTDSKPTYSR 827
Query: 128 GQISPKLE---IGLDQRISLNKYD-----DPKGAEGLDDNISCVSRANDTSTALSENNRN 179
G+ S + + ++++ L D + + +G I R + +AL EN +
Sbjct: 828 GRSSSVYDPSQMSAERQLELRLRDFLLDIEDRIYQGTLGAIKVTDR-HLWRSAL-ENGQ- 884
Query: 180 MDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPK-VRSPVPDSQS 238
++ N + + E E+ + E+ ++ I +G SP V + QS
Sbjct: 885 YELLNEENKENGIIKTVNEDAEEMEIDEQAKV--IVKDRLLGIKTESPSTVSTNASTPQS 942
Query: 239 DKRLVESSSDVLTKVHQKSEA---ETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQ 295
+V + L ++ Q E + D + LD+ +E L S+ A L V
Sbjct: 943 VSNVVHHLAMALFQIEQGIERRFLKAPLDASDSGRSYKTVLDRWRESLLSS--ASLSQV- 999
Query: 296 RFPAASGDETDESDIMEQDV--KVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKV 353
F S D S I + + C IC G + + +C C G HTYC++ L+ V
Sbjct: 1000 -FLHLS--TLDRSVIWSKSILNARCKICRKKGDAENMVLCDGCDRG-HHTYCVRPKLKTV 1055
Query: 354 PEGDWLCEECK 364
PEGDW C EC+
Sbjct: 1056 PEGDWFCPECR 1066
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 554 KGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNRE 612
+ L+++K E KSL RS S A A + L+PR + SA+N E
Sbjct: 1184 RSLRKIKSAPPTETKSLRIASRSTRQSHGALQADV--FVELLSPRRKRRGRKSANNTPE 1240
>UNIPROTKB|E2RE69 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AAEX03005669 EMBL:AAEX03005670 Ensembl:ENSCAFT00000021125
NextBio:20855328 Uniprot:E2RE69
Length = 1525
Score = 131 (51.2 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C IC G + + +C C G HTYC++ L+ VPEGDW C EC+
Sbjct: 1119 CKICRKKGDAENMVLCDGCDRG-HHTYCVRPKLKTVPEGDWFCPECR 1164
Score = 61 (26.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 201 EKAQ-SSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEA 259
EKA+ EK + E EK +++ V ++RL + K+ ++ E
Sbjct: 323 EKAKLKREKADALEAKKKEKEDKEKKKEELKKIV----EEERLKKKEEKERLKIEREKER 378
Query: 260 ETDRDNGEPPDEALKCLDKDKEELTSTQLAELPD 293
E R+ E LK K +E++ L ELP+
Sbjct: 379 EKLREEKRKYMEYLKQWSKPREDMECDDLKELPE 412
Score = 44 (20.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 361 EECKFAEETEKQK-QDIEGKRTNKQSTSTQSS 391
E+ + T K QD E KR ++ ST+SS
Sbjct: 1355 EKSRSLNVTSKLSLQDSESKRRGRKRQSTESS 1386
>UNIPROTKB|J9P748 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 CTD:11177
KO:K11655 OMA:SSFQNNV InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03005669 EMBL:AAEX03005670
RefSeq:XP_537409.2 Ensembl:ENSCAFT00000046060 GeneID:480287
KEGG:cfa:480287 Uniprot:J9P748
Length = 1557
Score = 131 (51.2 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECK 364
C IC G + + +C C G HTYC++ L+ VPEGDW C EC+
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRG-HHTYCVRPKLKTVPEGDWFCPECR 1196
Score = 61 (26.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 201 EKAQ-SSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEA 259
EKA+ EK + E EK +++ V ++RL + K+ ++ E
Sbjct: 323 EKAKLKREKADALEAKKKEKEDKEKKKEELKKIV----EEERLKKKEEKERLKIEREKER 378
Query: 260 ETDRDNGEPPDEALKCLDKDKEELTSTQLAELPD 293
E R+ E LK K +E++ L ELP+
Sbjct: 379 EKLREEKRKYMEYLKQWSKPREDMECDDLKELPE 412
Score = 44 (20.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 361 EECKFAEETEKQK-QDIEGKRTNKQSTSTQSS 391
E+ + T K QD E KR ++ ST+SS
Sbjct: 1387 EKSRSLNVTSKLSLQDSESKRRGRKRQSTESS 1418
>UNIPROTKB|E9PTW3 [details] [associations]
symbol:Dspp "Dentin sialophosphoprotein" species:10116
"Rattus norvegicus" [GO:0071460 "cellular response to cell-matrix
adhesion" evidence=IEA] RGD:2525 GeneTree:ENSGT00550000074777
GO:GO:0071460 IPI:IPI00198253 Ensembl:ENSRNOT00000002946
OMA:DESSIAV ArrayExpress:E9PTW3 Uniprot:E9PTW3
Length = 952
Score = 129 (50.5 bits), Expect = 0.00049, P = 0.00049
Identities = 78/385 (20%), Positives = 149/385 (38%)
Query: 55 NEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFE 114
+ +DD N + SE + S NS+HD+ S ++ESK S+ SD+ D
Sbjct: 497 DSSDDTSDTDDSDSNGDDDSESEDKDE-SDNSNHDNDS-DSESK-----SDSSDSDSDSS 549
Query: 115 IHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALS 174
S +++ S + D S + D ++ D + S S +ND+S + S
Sbjct: 550 DSSDSSDSSDSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSDSNDSSDS-S 608
Query: 175 ENNRNMDIKNLSHSS-ASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPV 233
+++ + D + S SS +S S + E ++SSE + S+ S + +S S S
Sbjct: 609 DSSDSSDSSDSSESSDSSDSSDSSDSSESSESSESSDSSD--SSDSSDSSDSSESSESSD 666
Query: 234 PDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPD 293
SD +SS + S +D + ++ D D + S+ ++ D
Sbjct: 667 SSDSSDSSDSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSDSSDSDSSDSSDSSD 726
Query: 294 VQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKV 353
+ S D +D SD D D+ + S SD ++ +
Sbjct: 727 SSD-SSDSSDSSDSSDSSNSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSD 785
Query: 354 PEGDWLCEECKFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAA-KRQAIET 412
+ + ++ + ++ S S+ SS +++ D++ ++ + ++
Sbjct: 786 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNSSDSSDSSDSSDSSDSSDS 845
Query: 413 SPGYPKP-LSPSKAAALSRDSSFKS 436
S S S ++ S DSS S
Sbjct: 846 SDSSDSSDSSDSSDSSNSSDSSDSS 870
>TAIR|locus:2159421 [details] [associations]
symbol:AT5G61120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688 IPI:IPI00529807
RefSeq:NP_200920.3 UniGene:At.8412 ProteinModelPortal:F4K200
SMR:F4K200 PRIDE:F4K200 EnsemblPlants:AT5G61120.1 GeneID:836233
KEGG:ath:AT5G61120 OMA:RSICETC Uniprot:F4K200
Length = 426
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQD- 375
+C+ CG G ++ L CS+C EH YCM+E + ++C +C K D
Sbjct: 11 ICETCGHQGWKNSLVTCSKCRIACEHCYCMRESSFETSI-HFVCADCSMRPVQNKFTSDS 69
Query: 376 IEG-KRTNKQSTSTQSS 391
I+G R+ + +SS
Sbjct: 70 IKGVPRSIRNKVRVESS 86
Score = 71 (30.1 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 26/110 (23%), Positives = 51/110 (46%)
Query: 880 VVSK-FPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFA--KDFESYGRNYKILVDSM 936
++SK P +++K VP + +F ++ +Y F K+ + + + ++M
Sbjct: 267 ILSKAIPVLLKVKLVPIGNLLSGLFMNRKPGLSDVEMYIFPDDKNTKRFTAERDHIFEAM 326
Query: 937 MKNDLALMGNLDGIELLIFPSNQLPENCQ-----RWNLLFFLWGVFRVRK 981
+ + N++G LLIF S L ++ Q + FLWG+F + K
Sbjct: 327 RIRNAMMKFNINGTPLLIFSSKLLDKSSQIIIKMQKKTNNFLWGIFLLTK 376
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 134 (52.2 bits), Expect = 0.00077, Sum P(3) = 0.00076
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 303 DETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEE 362
+ T + E+D C++CG + RED L +C C D H C+ LQ+VP +W C E
Sbjct: 173 ENTKACEAEEEDPTFCEVCGRSDREDRLLLCDGC-DAGYHMECLDPPLQEVPVDEWFCPE 231
Query: 363 C 363
C
Sbjct: 232 C 232
Score = 62 (26.9 bits), Expect = 0.00077, Sum P(3) = 0.00076
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 571 SRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVV---KSEGKGSTLTK 627
S LD T+ ++AT ST + LTPR A A R KV+ K+ + S +K
Sbjct: 309 SLLDE--TIEAVATGLSTAVYQRPLTPRVPAKRKRKAG--RRKKVLGRKKTRSRSSVKSK 364
Query: 628 SNSTLPRK 635
S ST +K
Sbjct: 365 SGSTRAKK 372
Score = 39 (18.8 bits), Expect = 0.00077, Sum P(3) = 0.00076
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 103 SSEI-SDASEDFEIHPKFSSRGGTAEGQISPKLEIGLD--QRISLNKYDDPK---GAEGL 156
SSE+ SDA E + + G +E + + D + L++ +DP+ G+E
Sbjct: 24 SSELASDAEESS------NGQSGDSEDDTGSEQDDDTDGEETEGLSEEEDPEDRSGSEDS 77
Query: 157 DDNISCVSRANDTSTALSENN 177
+D + + A +T L ++
Sbjct: 78 EDGVEMATAAIETQGKLEASS 98
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 143 (55.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC CG ED L +C C D + HT+C+ L VP+GDW C +C AEE K +
Sbjct: 295 DLYVCLFCGRGNNEDKLLLCDGCDD-SYHTFCLIPPLPDVPKGDWRCPKC-VAEECNKPR 352
Query: 374 QDIEGKRTNKQSTSTQSSGKRHAEN 398
+ ++ ++ T QS G+ A+N
Sbjct: 353 EAFGFEQAVREYT-LQSFGEM-ADN 375
Score = 42 (19.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 593 QKLTPRGEAVSFSSASNNRE-AKVVKSEGKGSTLTKSNSTLPRKGLE 638
Q L+PR + + S+ N R+ AK + + K L + + GLE
Sbjct: 1076 QVLSPRTDIGVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDGLE 1122
>TAIR|locus:2135575 [details] [associations]
symbol:ORC1B "origin of replication complex 1B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000808 "origin recognition complex"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006260 "DNA replication"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0010385 "double-stranded methylated DNA binding"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001965
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR019787
InterPro:IPR020793 Pfam:PF00004 Pfam:PF00628 Pfam:PF01426
PROSITE:PS50016 PROSITE:PS51038 SMART:SM00249 SMART:SM00382
SMART:SM00439 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006260
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0017111 EMBL:AL161534 eggNOG:COG1474
GO:GO:0009567 EMBL:AL049730 HSSP:Q9UIG0 GO:GO:0010385 KO:K02603
PANTHER:PTHR10763:SF6 GO:GO:0000808 HOGENOM:HOG000030288
ProtClustDB:CLSN2685758 EMBL:AJ426477 IPI:IPI00542580 PIR:E85135
RefSeq:NP_192999.1 UniGene:At.48852 ProteinModelPortal:Q9SU24
SMR:Q9SU24 DIP:DIP-46671N IntAct:Q9SU24 STRING:Q9SU24 PRIDE:Q9SU24
EnsemblPlants:AT4G12620.1 GeneID:826875 KEGG:ath:AT4G12620
TAIR:At4g12620 InParanoid:Q9SU24 OMA:RIILCEP PhylomeDB:Q9SU24
ArrayExpress:Q9SU24 Genevestigator:Q9SU24 Uniprot:Q9SU24
Length = 813
Score = 132 (51.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 279 DKEELTSTQLAELPD---VQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSR 335
+K E T+ E+ D V+R ++ DE ++ +I +D C IC + +++ C
Sbjct: 133 NKVEFDETEF-EIGDDVYVKRREDSNSDEEEDPEI--ED---CQICFKSDT-NIMIECDD 185
Query: 336 CSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQDI----EGKRTNKQSTSTQSS 391
C G H C+K L++VPEGDW+C+ C+ + + Q D+ EGK+ + S
Sbjct: 186 CLGGF-HLKCLKPPLKEVPEGDWICQFCEVKKSGQSQTLDLPKPPEGKKLARTMREKLLS 244
Query: 392 GKRHAENLD 400
G A +D
Sbjct: 245 GDLWAARID 253
Score = 46 (21.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 1252 IVPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKR 1287
++P++ SGR NL+R+L + D ++ M+ + R
Sbjct: 272 MIPEETVSGRQPHNLKRELYLTN-DFADIEMECILR 306
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 120 (47.3 bits), Expect = 0.00083, Sum P(4) = 0.00082
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 273 LKCLDKDKEELT----STQLAELPDVQRFPAASGDETDESDIMEQD---VKVCDICGDAG 325
L CLD + E+ S E +Q P DE +E E++ ++ C +C D G
Sbjct: 367 LVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGG 426
Query: 326 REDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+LL C C + H +C+ L ++P G+WLC C
Sbjct: 427 --ELLC-CDACPS-SYHLHCLNPPLPEIPNGEWLCPRC 460
Score = 60 (26.2 bits), Expect = 0.00083, Sum P(4) = 0.00082
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 364 KFAEETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPS 423
KF E E K D+EG + Q T + ++ + A +AK++ T PG K + S
Sbjct: 1194 KFGTE-ELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDS 1252
Query: 424 KAAALSRDSSFKSLDKGK 441
+ K LD+ +
Sbjct: 1253 SVIHYDDAAISKLLDRNQ 1270
Score = 56 (24.8 bits), Expect = 0.00083, Sum P(4) = 0.00082
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 1101 PPLEECNLAEGGLGTEVKSSLQATRTSISCSKGGTSEMNGDASLGEDSSSLKNFPVGNEG 1160
PP E L + E + L S+ S+G +SE+ D + E+ ++ G++
Sbjct: 1629 PPSPE-QLPREEVLPEKEKILDKLELSLIHSRGDSSELRPDDTKAEEKEPIETQQNGDKE 1687
Query: 1161 AHDEGSVDSGK 1171
DEG + K
Sbjct: 1688 EDDEGKKEDKK 1698
Score = 48 (22.0 bits), Expect = 0.00083, Sum P(4) = 0.00082
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 198 EGLEKAQSSEKLELSEIPS-VEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQK 256
+G K + ELSE +E+ S GS SP ++ K+ ++ + K +K
Sbjct: 62 KGKRKKKEGSNDELSENEEDLEEKSESEGSDY--SP---NKKKKKKLKDKKEKKAKRKKK 116
Query: 257 SEAETDRDNG 266
E E D D+G
Sbjct: 117 DEDEDDNDDG 126
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 144 (55.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC CG ED L +C C D + HT+C+ L VP+GDW C +C AEE K +
Sbjct: 292 DLYVCMFCGRGNNEDKLLLCDGCDD-SYHTFCLIPPLPDVPKGDWRCPKC-VAEECSKPR 349
Query: 374 QDIEGKRTNKQSTSTQSSGKRHAEN 398
+ ++ ++ T QS G+ A+N
Sbjct: 350 EAFGFEQAVREYT-LQSFGEM-ADN 372
Score = 40 (19.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SGR + L + ++ V +P I R NL D+ E A+ MMD
Sbjct: 814 SGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMD 866
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 144 (55.7 bits), Expect = 0.00098, Sum P(2) = 0.00097
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQK 373
D+ VC CG ED L +C C D + HT+C+ L VP+GDW C +C AEE K +
Sbjct: 292 DLYVCMFCGRGNNEDKLLLCDGCDD-SYHTFCLIPPLPDVPKGDWRCPKC-VAEECSKPR 349
Query: 374 QDIEGKRTNKQSTSTQSSGKRHAEN 398
+ ++ ++ T QS G+ A+N
Sbjct: 350 EAFGFEQAVREYT-LQSFGEM-ADN 372
Score = 40 (19.1 bits), Expect = 0.00098, Sum P(2) = 0.00097
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 1232 SGRDQINLERDLNESIVDGKI-VPDKIKSGRDQINLERDLNEGSVDAKNVMMD 1283
SGR + L + ++ V +P I R NL D+ E A+ MMD
Sbjct: 814 SGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMD 866
>UNIPROTKB|F1LWS6 [details] [associations]
symbol:F1LWS6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00209838 Ensembl:ENSRNOT00000020980
ArrayExpress:F1LWS6 Uniprot:F1LWS6
Length = 822
Score = 96 (38.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
C +C G DLL C CS H C+K L++VPE +W CE C
Sbjct: 284 CRVCHKLG--DLLC-CETCS-AVYHLECVKPPLEEVPEDEWQCEVC 325
Score = 82 (33.9 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 29/108 (26%), Positives = 48/108 (44%)
Query: 368 ETEKQKQDIEGKRTNKQSTSTQSSGKRHAENLDAAPA--AKRQAIETSPGYPKPLSPSKA 425
+ ++ +D E + ++ S++ + K E+ D +P A + +E PG KP P++
Sbjct: 460 DCDQNPEDTEKDKNEGENDSSKGAEKSREESEDQSPDKDADGKVLEEEPGQGKPEEPTEV 519
Query: 426 AALSRDSSFKSLDKGKVRPVTFGNNSSN-DVVET---ARSPGGLLPQT 469
DKG P G+N+ N ET RSP G L +T
Sbjct: 520 G-----------DKGNSVPANLGDNTRNASSEETPCEGRSPEGWLSET 556
>UNIPROTKB|A6QQS0 [details] [associations]
symbol:DPF2 "D4, zinc and double PHD fingers family 2"
species:9913 "Bos taurus" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:5977
KO:K13196 OrthoDB:EOG41JZD4 OMA:FPPVKSE EMBL:DAAA02063562
EMBL:BC149969 EMBL:BT030730 IPI:IPI00690122 RefSeq:NP_001093826.1
UniGene:Bt.18954 Ensembl:ENSBTAT00000030078 GeneID:513235
KEGG:bta:513235 InParanoid:A6QQS0 NextBio:20870765 Uniprot:A6QQS0
Length = 391
Score = 115 (45.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC 363
+ K C+ICG + +D L C C G H YC+ + + PEG W C C
Sbjct: 326 ECKCCNICGTSENDDQLLFCDDCDRGY-HMYCLTPSMSEPPEGSWSCHLC 374
Score = 54 (24.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 269 PDEALKCLD-KDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVK-VCDICG 322
PD+ L LD +D EE T + + + ++ + D S + ++D CDICG
Sbjct: 160 PDDFLDDLDDEDYEEDTPKRRGKGKSKSKGVGSARKKLDASILEDRDKPYACDICG 215
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1585 1521 0.00099 124 3 11 23 0.49 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 626 (67 KB)
Total size of DFA: 586 KB (2261 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 176.56u 0.10s 176.66t Elapsed: 00:00:08
Total cpu time: 176.59u 0.10s 176.69t Elapsed: 00:00:08
Start: Sat May 11 07:23:55 2013 End: Sat May 11 07:24:03 2013