Query 000396
Match_columns 1576
No_of_seqs 281 out of 1003
Neff 4.7
Searched_HMMs 29240
Date Tue Mar 26 17:41:24 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000396.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_173-177//hhsearch_pdb/000396hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nwc_A SMC protein; structural 1.0 1 1 181.8 12.5 161 1291-1518 20-182 (189)
2 3l51_B Structural maintenance 1.0 1 1 165.0 10.6 139 1314-1505 16-160 (166)
3 3l51_A Structural maintenance 1.0 1 1 161.1 13.5 146 1311-1503 11-161 (161)
4 1gxj_A SMC, chromosome segrega 1.0 1 1 145.2 11.4 161 1289-1505 12-174 (186)
5 2wd5_A Structural maintenance 1.0 1 1 144.2 10.8 139 1314-1504 51-196 (233)
6 1gxl_A SMC, chromosome segrega 1.0 1 1 143.2 13.4 144 1314-1505 41-186 (213)
7 2ioq_A Chaperone protein HTPG; 1.0 1 1 131.2 7.4 134 140-278 5-157 (624)
8 1y4s_A Chaperone protein HTPG; 1.0 1 1 130.9 12.2 313 140-527 5-349 (559)
9 1yc1_A HSP 86, heat shock prot 1.0 1 1 129.1 8.6 180 138-345 44-243 (264)
10 3peh_A Endoplasmin homolog; st 1.0 1 1 127.4 11.4 180 141-345 25-223 (281)
No 1
>3nwc_A SMC protein; structural maintenance of chromosomes (SMC), SMC hinge domai dimerization, DNA binding, cell cycle; 1.70A {Pyrococcus furiosus}
Probab=1.00 E-value=1 Score=181.80 Aligned_cols=161 Identities=18% Similarity=0.232 Sum_probs=130.8
Q ss_pred CCCCHHHEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCC
Q ss_conf 12200000003365568998887887014102011216745889999983324534699804888999998641188520
Q 000396 1291 QSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDR 1370 (1576)
Q Consensus 1291 ~~aa~i~~~l~~~~~~~~~~s~~~~gV~G~Va~L~~V~d~~la~~ls~~lg~~~m~~VV~~t~~~ak~l~~Ylke~~i~~ 1370 (1576)
+...++..+++.. .+||+|.|++|+.|++.+|..|++++||+ .|++||++|.+.|+.+.+|+++.+
T Consensus 20 ~~~~~v~~l~~~~----------~~gv~G~l~dLi~V~~~kye~Ave~aLG~-~l~~iVVd~~~~A~~~i~~Lk~~~--- 85 (189)
T 3nwc_A 20 RGNRAAEELKRSG----------IGGIYGTLAELIKVKDEAYALAIEVALGN-RADNVVVEDELVAEKAIKYLKEHK--- 85 (189)
T ss_dssp SSCTHHHHHTTSC----------CCSEEEEHHHHCEESCGGGHHHHHHHHGG-GGGCEEESSHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHCC----------CCCCEEEHHHHEEECHHHHHHHHHHHHCC-CCCCEEECCHHHHHHHHHHHHHCC---
T ss_conf 1789999999547----------89855778893156835689999998360-446078788899999999998648---
Q ss_pred CCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 01013556202755488037874279788899999999201135999999999999985177743111364342111235
Q 000396 1371 KCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSA 1450 (1576)
Q Consensus 1371 ~~~~~~~~~s~~~~~~GR~tfLpLd~Irp~~~~~~~~dpq~~l~lp~p~l~~g~~~~GfigyAvNlI~~d~~~~~~~t~~ 1450 (1576)
.||+||||||.|++. .++. ++|++ |+++|+||+++.
T Consensus 86 ---------------~GRatflpl~~i~~~------------------~~~~---~~g~~--a~dlv~~d~~~~------ 121 (189)
T 3nwc_A 86 ---------------LGRLTFLPLNKIKPK------------------HVDS---SVGLP--AVDVIEYDQKIE------ 121 (189)
T ss_dssp ---------------CCCCCEEETTTCCCC------------------CCCS---CSSEE--GGGGEECCGGGH------
T ss_pred ---------------CCCEEEEECCCCCCC------------------CCCC---CCCCE--EEEEECCCHHHH------
T ss_conf ---------------871499989866666------------------6889---99937--765543677788------
Q ss_pred CCCCCHHHHHHHHCCCEEECCHHHHHHHHHHCCCC-EEEECCCEEECCCEEEECCCC-CCEEECCCCCCC
Q ss_conf 88720238996602522001188699998411484-597028812116508714699-840102432245
Q 000396 1451 GNGLRETLLYRLFGKLQVYKTRKDMIEAHTCIRHG-AVSLDGGILKEDGIISLGCGN-PTICFPIVRTRI 1518 (1576)
Q Consensus 1451 g~gLRetif~~lFg~t~Vy~T~~~m~~A~~~i~~~-~VTLDG~li~~sG~~tgG~~~-~~~~F~~~~~~~ 1518 (1576)
.+|+++||+++|+++ ++.|+.+..+. +|||||++++++|.|+||+.. ++++|+...+..
T Consensus 122 ------~a~~~llg~tlvv~d---l~~A~~l~~~~r~VTldGd~i~~~G~~tGG~~~~~~~~f~~~~~~~ 182 (189)
T 3nwc_A 122 ------NAVKFALGDTVIVNS---MEEARPHIGKVRMVTIEGELYERSGAITGGHFRARGLAVDTTKLRL 182 (189)
T ss_dssp ------HHHHHHHTTEEEESC---SGGGGGGTTTSEEEETTSCEECTTSCEECSCSSCCCSEECSSCCCC
T ss_pred ------HHHHHHHCCEEEECC---HHHHHHHHCCCEEEECCCCEEECCEEEEECCCCCCCCEECHHHEEE
T ss_conf ------999988199899999---9999998679739968981997888998089899875111222031
No 2
>3l51_B Structural maintenance of chromosomes protein 4; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus} SCOP: d.215.1.0
Probab=1.00 E-value=1 Score=165.00 Aligned_cols=139 Identities=16% Similarity=0.235 Sum_probs=112.2
Q ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 88701410201121674588999998332453469980488899999864118852001013556202755488037874
Q 000396 1314 MEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVIC 1393 (1576)
Q Consensus 1314 ~~gV~G~Va~L~~V~d~~la~~ls~~lg~~~m~~VV~~t~~~ak~l~~Ylke~~i~~~~~~~~~~~s~~~~~~GR~tfLp 1393 (1576)
.+||+|.|++|+.|+ ++|..|+++++| .|+.||++|.+.|+.+++|+++.+ .||+||||
T Consensus 16 ~~Gv~G~v~dLi~v~-~~y~~Aie~alg--~l~~iVVd~~~~A~~~i~~Lk~~~------------------~GRatflp 74 (166)
T 3l51_B 16 IPGIYGRLGDLGAID-EKYDIAISSCCH--ALDYIVVDSIDTAQECVNFLKKHN------------------IGIATFIG 74 (166)
T ss_dssp STTEEEEGGGSCBCC-GGGHHHHHHHCG--GGGSEEESCHHHHHHHHHHHHHTT------------------CCCCCEEE
T ss_pred CCCCEEEHHHHEEEC-HHHHHHHHHHHH--HCCEEEECCHHHHHHHHHHHHHCC------------------CCEEEEEE
T ss_conf 997168877803007-879999999971--284299887999999999998729------------------97079998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC-CCCCCCCCCCCCCCCHHHHHHHHCCCEEECCH
Q ss_conf 27978889999999920113599999999999998517774311136-43421112358872023899660252200118
Q 000396 1394 LEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLD-DHHMHIRTSAGNGLRETLLYRLFGKLQVYKTR 1472 (1576)
Q Consensus 1394 Ld~Irp~~~~~~~~dpq~~l~lp~p~l~~g~~~~GfigyAvNlI~~d-~~~~~~~t~~g~gLRetif~~lFg~t~Vy~T~ 1472 (1576)
||+|++.... .+.. . .|+...+|+++|+|+ ++|. .+|+++||+++|++
T Consensus 75 L~~i~~~~~~-------------~~~~---~-~~~~~~~a~dlv~~~d~~~~------------~a~~~llg~tlVv~-- 123 (166)
T 3l51_B 75 LDKMTVWAKK-------------MSKI---Q-TPENTPRLFDLVKVKNEEIR------------QAFYFALRDTLVAN-- 123 (166)
T ss_dssp GGGTGGGTTS-------------CCCC---C-CGGGCCBHHHHCBCSCHHHH------------HHHHHHHTTCEEES--
T ss_pred CCCCCCCCCC-------------CCCC---C-CCCCHHHHHHEEECCCHHHH------------HHHHHHCCCEEEEC--
T ss_conf 8655545566-------------3302---2-66546568520407868899------------99999829989989--
Q ss_pred HHHHHHHHHC-----CCCEEEECCCEEECCCEEEECCC
Q ss_conf 8699998411-----48459702881211650871469
Q 000396 1473 KDMIEAHTCI-----RHGAVSLDGGILKEDGIISLGCG 1505 (1576)
Q Consensus 1473 ~~m~~A~~~i-----~~~~VTLDG~li~~sG~~tgG~~ 1505 (1576)
+++.|+... +-.+|||||++++++|.||||+.
T Consensus 124 -dl~~A~~~~~~~~~~~r~VTldGdli~~~G~~tGG~~ 160 (166)
T 3l51_B 124 -NLDQATRVAYQRDRRWRVVTLQGQIIEQSGTMSGGLE 160 (166)
T ss_dssp -SHHHHHHHHBCSSCBCCEEETTSCEECTTCCEEECCG
T ss_pred -CHHHHHHHHHHHCCCCEEEECCCEEEECCEEEECCCC
T ss_conf -9999999888608994899789889958988978885
No 3
>3l51_A Structural maintenance of chromosomes protein 2; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus}
Probab=1.00 E-value=1 Score=161.10 Aligned_cols=146 Identities=23% Similarity=0.246 Sum_probs=114.3
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEE
Q ss_conf 88788701410201121674588999998332453469980488899999864118852001013556202755488037
Q 000396 1311 SNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYL 1390 (1576)
Q Consensus 1311 s~~~~gV~G~Va~L~~V~d~~la~~ls~~lg~~~m~~VV~~t~~~ak~l~~Ylke~~i~~~~~~~~~~~s~~~~~~GR~t 1390 (1576)
....+||+|.|++|++|++++|..|++++||+ .|+.||++|.+.|+.+.+|+ ...||+|
T Consensus 11 ~~~~~gv~G~v~dLi~v~d~~y~~Ave~alG~-~l~~iVVd~~~~A~~~i~~~--------------------~~~GR~t 69 (161)
T 3l51_A 11 NWNRNSVKGLVASLINVKDNSTATALEVVAGE-RLYNVVVDTEVTAKKLLEKG--------------------ELKRRYT 69 (161)
T ss_dssp TCCGGGEEEEGGGSCEESCGGGHHHHHHHHGG-GGGCEEESCHHHHHHHHHHS--------------------CCSSCEE
T ss_pred CCCCCCCEEEHHHHEEECCHHHHHHHHHHHCC-CCCEEEECCHHHHHHHHHHH--------------------HHCCCEE
T ss_conf 98857547887791251842199999998341-12349989789999999987--------------------5278579
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEC
Q ss_conf 87427978889999999920113599999999999998517774311136434211123588720238996602522001
Q 000396 1391 VICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYK 1470 (1576)
Q Consensus 1391 fLpLd~Irp~~~~~~~~dpq~~l~lp~p~l~~g~~~~GfigyAvNlI~~d~~~~~~~t~~g~gLRetif~~lFg~t~Vy~ 1470 (1576)
|||||+|++.... + +.... + .+...++.+++|+++|+||+++. .+|+++||+++|++
T Consensus 70 flpL~~i~~~~~~-----~-~~~~~--~---~~~~~~~~~~~a~dlv~~d~~~~------------~a~~~llg~tlv~~ 126 (161)
T 3l51_A 70 IIPLNKISARCIA-----P-ETLRV--A---QNLVGPDNVHVALSLVDYKPELQ------------KGMEFVFGTTFVCN 126 (161)
T ss_dssp EEETTTCCCCCCC-----H-HHHHH--H---HHHHCTTSEEEGGGGEECCGGGH------------HHHHHHHTTCEEES
T ss_pred EEECCCCCCCCCC-----H-HHHHH--H---HHCCCCCCHHHHHHHHCCCHHHH------------HHHHHHCCCEEEEC
T ss_conf 9987644556768-----7-77755--4---40478861567888850788899------------99999839989999
Q ss_pred CHHHHHHHHHHCC-----CCEEEECCCEEECCCEEEEC
Q ss_conf 1886999984114-----84597028812116508714
Q 000396 1471 TRKDMIEAHTCIR-----HGAVSLDGGILKEDGIISLG 1503 (1576)
Q Consensus 1471 T~~~m~~A~~~i~-----~~~VTLDG~li~~sG~~tgG 1503 (1576)
+++.|+.... -.+|||||++++++|.|+||
T Consensus 127 ---dl~~A~~~~~~~~~~~r~VTldGd~i~~~G~~tGG 161 (161)
T 3l51_A 127 ---NMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGG 161 (161)
T ss_dssp ---SHHHHHHHHHCTTTCCCEEETTSCEECCC------
T ss_pred ---CHHHHHHHHHHCCCCCEEEECCCEEECCCEEEECC
T ss_conf ---99999999974599874996998598587887359
No 4
>1gxj_A SMC, chromosome segregation SMC protein; SMC dimerisation domain, anti parallel coiled coil, SMC proteins; 2.0A {Thermotoga maritima} SCOP: d.215.1.1 PDB: 1gxk_A
Probab=1.00 E-value=1 Score=145.20 Aligned_cols=161 Identities=24% Similarity=0.280 Sum_probs=121.1
Q ss_pred HHCCCCHHHEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCC
Q ss_conf 31122000000033655689988878870141020112167458899999833245346998048889999986411885
Q 000396 1289 IYQSAASVICCSTKEFLCSKPRSNFMEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTI 1368 (1576)
Q Consensus 1289 ~e~~aa~i~~~l~~~~~~~~~~s~~~~gV~G~Va~L~~V~d~~la~~ls~~lg~~~m~~VV~~t~~~ak~l~~Ylke~~i 1368 (1576)
.++...++..+++.+.. .+||+|.|++|+.|+ +.|..|++++||+ .|++||+.+.+.++.+..|+++.+
T Consensus 12 ~~~~~~~~~~~l~~~~~--------~~g~~g~l~~li~v~-~~~e~Ave~aLG~-~l~~ivv~~~~~a~~~i~~lk~~~- 80 (186)
T 1gxj_A 12 YRGFSRAVRAVFEEKER--------FPGLVDVVSNLIEVD-EKYSLAVSVLLGG-TAQNIVVRNVDTAKAIVEFLKQNE- 80 (186)
T ss_dssp --CCCHHHHHHHHTGGG--------CTTEEEEHHHHCBCC-GGGHHHHHHHHGG-GGGCEEESSHHHHHHHHHHHHHHT-
T ss_pred HCCHHHHHHHHHHHHHH--------HCCCCEEHHHEECCC-HHHHHHHHHHHHH-HHHEEEECCHHHHHHHHHHHHHCC-
T ss_conf 71314899999996464--------089622453322338-8999999999888-651899898999999999998569-
Q ss_pred CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 20010135562027554880378742797888999999992011359999999999999851777431113643421112
Q 000396 1369 DRKCALHATAAALGKSIDGRYLVICLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRT 1448 (1576)
Q Consensus 1369 ~~~~~~~~~~~s~~~~~~GR~tfLpLd~Irp~~~~~~~~dpq~~l~lp~p~l~~g~~~~GfigyAvNlI~~d~~~~~~~t 1448 (1576)
.||++|+||+.+++.. . +.+.+. .++|++++|.++|++|+++.
T Consensus 81 -----------------~gr~tflpl~~~~~~~-~------------~~~~~~---~~~g~~~~~~dlv~~~~~~~---- 123 (186)
T 1gxj_A 81 -----------------AGRVTILPLDLIDGSF-N------------RISGLE---NERGFVGYAVDLVKFPSDLE---- 123 (186)
T ss_dssp -----------------CCCEEEEETTTCCCCC-C------------CCTTGG---GSTTEEEEHHHHCBCCGGGH----
T ss_pred -----------------CCCEEEEECCCCCCCC-C------------CCHHCC---CCCCCHHHHHHHCCCCHHHH----
T ss_conf -----------------9836998733257776-6------------201102---68971578988715878999----
Q ss_pred CCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHH--CCCCEEEECCCEEECCCEEEECCC
Q ss_conf 358872023899660252200118869999841--148459702881211650871469
Q 000396 1449 SAGNGLRETLLYRLFGKLQVYKTRKDMIEAHTC--IRHGAVSLDGGILKEDGIISLGCG 1505 (1576)
Q Consensus 1449 ~~g~gLRetif~~lFg~t~Vy~T~~~m~~A~~~--i~~~~VTLDG~li~~sG~~tgG~~ 1505 (1576)
.++.++|+++.|.++.+.......- .+..+||+||++++++|.|+||+.
T Consensus 124 --------~~~~~~lg~~~v~~~l~~A~~l~~~~~~~~~~VTldG~~~~~~G~~~gG~~ 174 (186)
T 1gxj_A 124 --------VLGGFLFGNSVVVETLDDAIRMKKKYRLNTRIATLDGELISGRGAITGGRE 174 (186)
T ss_dssp --------HHHHHHHTTCEEESCHHHHHHHHHHHTCCSCEEETTSCEECTTSCEEEEEC
T ss_pred --------HHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEECCCEEECCCEEEECCCC
T ss_conf --------999998499899999999999998449986499689809869977978988
No 5
>2wd5_A Structural maintenance of chromosomes protein 1A; DNA damage, cell cycle, cell division; 2.70A {Mus musculus}
Probab=1.00 E-value=1 Score=144.21 Aligned_cols=139 Identities=19% Similarity=0.249 Sum_probs=109.9
Q ss_pred CCC-CEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 887-0141020112167458899999833245346998048889999986411885200101355620275548803787
Q 000396 1314 MED-VVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVI 1392 (1576)
Q Consensus 1314 ~~g-V~G~Va~L~~V~d~~la~~ls~~lg~~~m~~VV~~t~~~ak~l~~Ylke~~i~~~~~~~~~~~s~~~~~~GR~tfL 1392 (1576)
.+| |+|.|++|+.|.++.|..||+.+||+ .|++||+.+.+.++.+..|+++.+ .||++|+
T Consensus 51 ~~g~v~G~l~dli~v~~~~ye~Ave~aLG~-~l~~iVV~~~~~a~~~i~~Lk~~~------------------~Gr~tfl 111 (233)
T 2wd5_A 51 YPGSVYGRLIDLCQPTQKKYQIAVTKVLGK-NMDAIIVDSEKTGRDCIQYIKEQR------------------GEPETFL 111 (233)
T ss_dssp SGGGEEEEHHHHEEESSGGGHHHHHHHHGG-GGSCEEESCHHHHHHHHHHHHHTT------------------CCCEEEE
T ss_pred CCCCEEEEHHHHCEECCHHHHHHHHHHHHH-HHCEEEECCHHHHHHHHHHHHHCC------------------CCCEEEE
T ss_conf 899866667895122868999999999888-655799898999999999998659------------------9971799
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC-CCCCCCCCCCCCCCCCHHHHHHHHCCCEEECC
Q ss_conf 42797888999999992011359999999999999851777431113-64342111235887202389966025220011
Q 000396 1393 CLEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNL-DDHHMHIRTSAGNGLRETLLYRLFGKLQVYKT 1471 (1576)
Q Consensus 1393 pLd~Irp~~~~~~~~dpq~~l~lp~p~l~~g~~~~GfigyAvNlI~~-d~~~~~~~t~~g~gLRetif~~lFg~t~Vy~T 1471 (1576)
||+.+++.... +.++. ++|+ ..+.++|.+ ++.+. .++.++|++++|.++
T Consensus 112 pl~~i~~~~~~--------------~~~~~---~~g~-~~l~dlV~~~~~~~~------------~~~~~~Lg~~~vv~d 161 (233)
T 2wd5_A 112 PLDYLEVKPTD--------------EKLRE---LKGA-KLVIDVIRYEPPHIK------------KALQYACGNALVCDN 161 (233)
T ss_dssp ETTTCCCCCCC--------------GGGGG---CSSC-EESGGGEEESSGGGH------------HHHHHHTTTCEEESS
T ss_pred ECCCCCCCCCC--------------HHCCC---CCCC-HHHHHHHHCCCHHHH------------HHHHHHHCCEEEECC
T ss_conf 77313667752--------------11058---7884-478876517868899------------999999299899999
Q ss_pred HHHHHHHHHHC-----CCCEEEECCCEEECCCEEEECC
Q ss_conf 88699998411-----4845970288121165087146
Q 000396 1472 RKDMIEAHTCI-----RHGAVSLDGGILKEDGIISLGC 1504 (1576)
Q Consensus 1472 ~~~m~~A~~~i-----~~~~VTLDG~li~~sG~~tgG~ 1504 (1576)
. ..|+.+. +..+||+||+++.++|.|+||+
T Consensus 162 l---~~A~~l~~~~~~~~r~VTldG~~~~~~G~~tGG~ 196 (233)
T 2wd5_A 162 V---EDARRIAFGGHQRHKTVALDGTLFQKSGVISGGA 196 (233)
T ss_dssp H---HHHHHHHHSSSSCCCEEETTCCEECTTSCEEECH
T ss_pred H---HHHHHHHHHCCCCCEEEECCCEEEECCEEEECCC
T ss_conf 9---9999999846998169956987980892686899
No 6
>1gxl_A SMC, chromosome segregation SMC protein; SMC dimerisation domain, anti parallel coiled coil, SMC proteins; 3.0A {Thermotoga maritima} SCOP: d.215.1.1
Probab=1.00 E-value=1 Score=143.19 Aligned_cols=144 Identities=26% Similarity=0.343 Sum_probs=113.1
Q ss_pred CCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 88701410201121674588999998332453469980488899999864118852001013556202755488037874
Q 000396 1314 MEDVVGPVALIGTVCTNKLSRTLAEYLGEHQMLALVCRSFEAAFALEKYEQDGTIDRKCALHATAAALGKSIDGRYLVIC 1393 (1576)
Q Consensus 1314 ~~gV~G~Va~L~~V~d~~la~~ls~~lg~~~m~~VV~~t~~~ak~l~~Ylke~~i~~~~~~~~~~~s~~~~~~GR~tfLp 1393 (1576)
.+|++|.|++|+.| ++.|..|++.+||+ .|++||+.+.+.++.+..|+++.+ .||.+|+|
T Consensus 41 ~~g~~g~l~~li~v-~~~~e~Ave~aLg~-~l~~ivv~~~~~a~~~i~~lk~~~------------------~gr~~~lp 100 (213)
T 1gxl_A 41 FPGLVDVVSNLIEV-DEKYSLAVSVLLGG-TAQNIVVRNVDTAKAIVEFLKQNE------------------AGRVTILP 100 (213)
T ss_dssp CTTEEEEGGGTCBC-CHHHHHHHHHHHGG-GGGCEEESSHHHHHHHHHHHHHHT------------------CEEEEEEE
T ss_pred HCCCCEEHHHEEEE-CHHHHHHHHHHHHH-HHCEEEECCHHHHHHHHHHHHHCC------------------CCCEEEEE
T ss_conf 08973133420540-89999999999878-656799898999999999998569------------------98259987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCHH
Q ss_conf 27978889999999920113599999999999998517774311136434211123588720238996602522001188
Q 000396 1394 LEGIRPYSGKFGSNDPQRKLALPAPTLPKGNIPAGFVGYAVNMVNLDDHHMHIRTSAGNGLRETLLYRLFGKLQVYKTRK 1473 (1576)
Q Consensus 1394 Ld~Irp~~~~~~~~dpq~~l~lp~p~l~~g~~~~GfigyAvNlI~~d~~~~~~~t~~g~gLRetif~~lFg~t~Vy~T~~ 1473 (1576)
|+.+.+.. . +.+.++ .++|+++++.++|.+++.+. .++.++|+++.|.++.+
T Consensus 101 l~~~~~~~-~------------~~~~~~---~~~g~~~~~~d~v~~~~~~~------------~~~~~~lg~~~vv~~l~ 152 (213)
T 1gxl_A 101 LDLIDGSF-N------------RISGLE---NERGFVGYAVDLVKFPSDLE------------VLGGFLFGNSVVVETLD 152 (213)
T ss_dssp TTTSCCCC-C------------CCTTGG---GSTTEEEEGGGGCBCCSTTH------------HHHHHHSSSEEEESSHH
T ss_pred CHHCCCCC-C------------CCHHHH---CCCCCHHHHHHHHCCCHHHH------------HHHHHHHCCEEEECCHH
T ss_conf 31127887-5------------200110---47971778988804878999------------99999809989998999
Q ss_pred HHHHHHHH--CCCCEEEECCCEEECCCEEEECCC
Q ss_conf 69999841--148459702881211650871469
Q 000396 1474 DMIEAHTC--IRHGAVSLDGGILKEDGIISLGCG 1505 (1576)
Q Consensus 1474 ~m~~A~~~--i~~~~VTLDG~li~~sG~~tgG~~ 1505 (1576)
.......- .+..+||+||+++.++|.|+||+.
T Consensus 153 ~A~~~~~~~~~~~~~VT~~G~~~~~~G~~~gg~~ 186 (213)
T 1gxl_A 153 DAIRMKKKYRLNTRIATLDGELISGRGAITGGRE 186 (213)
T ss_dssp HHHHHHHHTCSSCEEECTTSCEECTTSCEEECCC
T ss_pred HHHHHHHHCCCCCEEEECCCEEECCCCEEECCCC
T ss_conf 9999998459980599549969868906988987
No 7
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=1.00 E-value=1 Score=131.18 Aligned_cols=134 Identities=17% Similarity=0.218 Sum_probs=92.0
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHCCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 3102588977-8850789-89-9899999993110210013-------------89960799999616985999979999
Q 000396 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1576)
Q Consensus 140 n~~dL~Ps~~-lL~~l~~-~Y-sl~sAIAELVDNSIDA~~~-------------N~~A~rI~I~I~~d~~~I~I~DNG~G 203 (1576)
.++.+..+++ +|..++. -| +...+|+|||+||+||..+ .+...+|.|.++-+...|.|.|||+|
T Consensus 5 e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~a~~~~I~I~~d~~~~~I~I~DnGiG 84 (624)
T 2ioq_A 5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVG 84 (624)
T ss_dssp ----------CCHHHHHHHHSSCTTHHHHHHHHHHHHHHHHHHHHHHTSTTTTTTCCCCCEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 43320413999999998733798579999999979986565677642681003678874799999689748999989989
Q ss_pred CCHHHHHHHHHCCCCCCCHHCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECC--CCEEEEEEEE
Q ss_conf 99676967531133454200000-011468999998997653346213445303477999995079--8159999973
Q 000396 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKV--SKEVYTLHLE 278 (1576)
Q Consensus 204 Ms~deL~~~~~wg~~g~S~kR~~-~a~~~Ggk~p~~~~~LGrFGvGlK~AsfsLG~~itV~TK~~g--s~~v~~l~Ld 278 (1576)
|+++++.+ .|++.+.|..+.. .+...+ .......+|+||+|+. ++|+++++++|.|++.+ ....+.|..+
T Consensus 85 Mt~edl~~--~l~tiA~Sg~~~f~~~l~~~--~~~~~~~iG~fGvGfy-S~f~VadkV~V~Sr~~~~~~~~~~~w~s~ 157 (624)
T 2ioq_A 85 MTRDEVID--HLGTIAKSGTKSFLESLGSD--QAKDSQLIGQFGVGFY-SAFIVADKVTVRTRAAGEKPENGVFWESA 157 (624)
T ss_dssp CCHHHHHH--HHHHHCC-----------------CCTTHHHHHHHHHH-HHHHHEEEEEEEEECTTSCGGGEEEEEEC
T ss_pred CCHHHHHH--HHHHHCCCCCHHHHHHHCCC--CCCCCCCCCCCCCCHH-HHHHCCCEEEEEECCCCCCCCEEEEEEEE
T ss_conf 89999999--98766055617789873011--1135444588884379-89705786999977899888725999993
No 8
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=1.00 E-value=1 Score=130.92 Aligned_cols=313 Identities=15% Similarity=0.169 Sum_probs=163.6
Q ss_pred CCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHCCCC-------------CCCCEEEEEEEEECCCEEEEEECCCC
Q ss_conf 3102588977-8850789-89-9899999993110210013-------------89960799999616985999979999
Q 000396 140 NMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPG 203 (1576)
Q Consensus 140 n~~dL~Ps~~-lL~~l~~-~Y-sl~sAIAELVDNSIDA~~~-------------N~~A~rI~I~I~~d~~~I~I~DNG~G 203 (1576)
.++.+..+++ +|..++. -| ++..+|+|||+||+||..+ .+...+|.|.++-+...|.|.|||+|
T Consensus 5 e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~~~~~I~I~DnGiG 84 (559)
T 1y4s_A 5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVG 84 (559)
T ss_dssp EEEECCTTHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGCSCCCCCEEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 53210303999999998743798489999999879987576777642681112678764799999689858999989988
Q ss_pred CCHHHHHHHHHCCCCCCCHHCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCC--CEEEEEEEEHH
Q ss_conf 99676967531133454200000-0114689999989976533462134453034779999950798--15999997326
Q 000396 204 MDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVS--KEVYTLHLEKE 280 (1576)
Q Consensus 204 Ms~deL~~~~~wg~~g~S~kR~~-~a~~~Ggk~p~~~~~LGrFGvGlK~AsfsLG~~itV~TK~~gs--~~v~~l~Ld~e 280 (1576)
|+++++.+ .|++.+.|..+.. .+...+ .......+|+||+|+. ++|.++++++|.|++.+. ...+.|..+.
T Consensus 85 Mt~edl~~--~l~tiA~Sg~~~f~e~l~~~--~~~~~~~iG~fGvGfy-S~f~VadkV~V~Sr~~~~~~~~~~~w~s~g- 158 (559)
T 1y4s_A 85 MTRDEVID--HLGTIAKSGTKSFLESLGSD--QAKDSQLIGQFGVGFY-SAFIVADKVTVRTRAAGEKPENGVFWESAG- 158 (559)
T ss_dssp CCHHHHHH--HHSCCSCCCCCCTTCC----------CCCCSSCCCSGG-GHHHHEEEEEEEEECSSSCGGGEEEEEECS-
T ss_pred CCHHHHHH--HHHHHCCCCCHHHHHHHHCC--CCCCCCCCCCCCCCHH-HHHHCCCEEEEEECCCCCCCCEEEEEEEEC-
T ss_conf 89999999--97655155627789874111--1135443488876356-564145768999757998887248999937-
Q ss_pred HHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC---C---CCCHHHHHHHHHHHCCCCCCCCC-CCCCC
Q ss_conf 77511345675021588779995546689999805999958977---7---75725799999723088631233-45789
Q 000396 281 ALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPKL---K---SLDVKPLGCKLKDIYFPYIQCDE-ISSTG 353 (1576)
Q Consensus 281 ~L~~~s~~~~ew~l~~~ir~ps~eEi~~s~sGTFT~VVI~el~~---~---~~~i~~Lkr~La~IYh~yL~~d~-~s~~g 353 (1576)
...|.+.. ....++|| +|++. ++. . ...+..+-+..+....+.|.... -...|
T Consensus 159 --------~~~~~i~~---------~~~~~~GT--~I~L~-Lk~d~~Efle~~~I~~iv~kys~fi~~PI~~~~~e~~~~ 218 (559)
T 1y4s_A 159 --------EGEYTVAD---------ITKEDRGT--EITLH-LREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG 218 (559)
T ss_dssp --------SSEEEEEE---------ECCCSCEE--EEEEE-ECTTCGGGSCHHHHHHHHHHHHTTCSSCEEEEEEECSTT
T ss_pred --------CCEEEEEE---------CCCCCCCE--EEEEE-ECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf --------97358867---------77789983--99999-765554235099999999997345787538961145566
Q ss_pred CCCCCEEEEECCEECCCCCCCCEEE---ECCCCC--CC-CCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 7666659976773211126972013---011225--99-96069999965126544579998898643189999971258
Q 000396 354 KTTRPIEFQVNGIDLAEVAGGEVAI---TNMHSC--NG-PDFILQLHFSLRQASATTNSPGSRPSKEANARLKFVYFPVT 427 (1576)
Q Consensus 354 k~~~pIei~Vng~~L~~Ieg~~v~~---~~l~~~--~g-~~f~fel~~~v~~~~~~l~~Pg~~~~~~g~V~g~~~YfPf~ 427 (1576)
+.....+..-++..|+.-..+.++. ...|-. +. ..-.+.+|+.+ ++ .-..+|.+ |+|-.
T Consensus 219 ~~~~~~~~in~~~~lw~~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih~~~-------------eg-~~~~~gll-~~P~~ 283 (559)
T 1y4s_A 219 ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRV-------------EG-KQEYTSLL-YIPSQ 283 (559)
T ss_dssp SCEEEEEECCCCCCGGGSCGGGCCHHHHHHHHHHHHTCSSCEEEEEEECC-------------CS-SSCEEEEE-EEESS
T ss_pred CCCCCEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECC-------------CC-CEEEEEEE-ECCCC
T ss_conf 54332289757832222586403099999998764132424838998325-------------78-56999999-90786
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCEEEEEEECCCCC
Q ss_conf 88873337878753038755434454542210245501565442224463111003510122787640242754079998
Q 000396 428 EEGESIDIIMNKLISEGCVAAANYDTRSRVSIRRLGRLLPDVHWAWLPLMDLRQRKGEKAHLLKKFCLRVKCFIDTDAGF 507 (1576)
Q Consensus 428 ~~kEt~p~~~~~l~~~g~~~~~~fe~f~~vsvrw~GRLip~~~~~~l~fm~~~~krg~k~~~~~~~~~Rvkg~l~~~~~F 507 (1576)
.--+ +.... .-.++.+|-+||+|-+-- ++.+| +|.+=|+|.++..+ -
T Consensus 284 ~p~~--------~~~r~--------~~~~i~lyvn~v~I~d~~---------------~~llP-~~l~fv~gvVDs~d-l 330 (559)
T 1y4s_A 284 APWD--------MWNRD--------HKHGLKLYVQRVFIMDDA---------------EQFMP-NYLRFVRGLIDSSD-L 330 (559)
T ss_dssp CCTT--------CSSSS--------CCCCEEEEETTEEEEEEE---------------GGGSC-GGGTTCEEEEEESS-S
T ss_pred CCCH--------HHHHC--------CCCCEEEEECCEEEECCH---------------HHHCH-HHHHHEEEEECHHH-C
T ss_conf 7610--------22021--------368769999587933612---------------30474-75725467407622-7
Q ss_pred CCCCCCCCCCCCCHHHHHHH
Q ss_conf 87888442232013899997
Q 000396 508 NPTPSKTDLAHQNLYTIALK 527 (1576)
Q Consensus 508 ~vT~nK~~l~~~~~~~~~L~ 527 (1576)
+++-|+..|-. +.+...+.
T Consensus 331 plNVSRE~lq~-~~~l~~I~ 349 (559)
T 1y4s_A 331 PLNVSREILQD-STVTRNLR 349 (559)
T ss_dssp CTTCCTTGGGG-CHHHHHHH
T ss_pred CCEECCHHHHH-HHHHHHHH
T ss_conf 97217534423-38999999
No 9
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=1.00 E-value=1 Score=129.12 Aligned_cols=180 Identities=19% Similarity=0.213 Sum_probs=109.3
Q ss_pred CCCCCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHCCCC--------C---CCCEEEEEEEEE--CCCEEEEEECC
Q ss_conf 223102588977-8850789-89-9899999993110210013--------8---996079999961--69859999799
Q 000396 138 FENMWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT--------N---AKNERRLISVNI--AEDKISVFDTG 201 (1576)
Q Consensus 138 ~~n~~dL~Ps~~-lL~~l~~-~Y-sl~sAIAELVDNSIDA~~~--------N---~~A~rI~I~I~~--d~~~I~I~DNG 201 (1576)
....+.+.++.. ++..+.. .| ++..+|+|||+||+||.++ + +....+.|.+.. ....|.|.|||
T Consensus 44 ~~e~~~F~~ei~~Ll~ll~~~lys~~~~~lrELI~NA~DA~ak~r~~~l~~~~~~~~~~~i~I~i~~d~~~~~I~I~DnG 123 (264)
T 1yc1_A 44 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELHINLIPNKQDRTLTIVDTG 123 (264)
T ss_dssp CEEEEECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGGGCCCCCEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEECC
T ss_conf 32468735889999999988602888899999987899886635544225731137897389999987984699999888
Q ss_pred CCCCHHHHHHHHHCCCCCCCHHCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHH
Q ss_conf 9999676967531133454200000-011468999998997653346213445303477999995079815999997326
Q 000396 202 PGMDSTDENSIVKWGKMGASLHRAS-KAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKE 280 (1576)
Q Consensus 202 ~GMs~deL~~~~~wg~~g~S~kR~~-~a~~~Ggk~p~~~~~LGrFGvGlK~AsfsLG~~itV~TK~~gs~~v~~l~Ld~e 280 (1576)
+||++++|.. .|+..+.|..+.. ..... ......+|+||+|++ ++|.++++++|.|++.+.. .+.|..+.
T Consensus 124 ~GMs~edL~~--~l~~ia~S~~~~f~~~l~~----~~d~~~iG~fGiGf~-S~f~va~~v~V~Sr~~~~~-~~~w~~~~- 194 (264)
T 1yc1_A 124 IGMTKADLIN--NLGTIAKSGTKAFMEALQA----GADISMIGQFGVGFY-SAYLVAEKVTVITKHNDDE-QYAWESSA- 194 (264)
T ss_dssp CCCCHHHHHH--HHHSCTTSCHHHHHHHHHT----TCCGGGGGGGTCGGG-GHHHHEEEEEEEEECTTSC-CEEEEECS-
T ss_pred CCCCHHHHHH--HHHHHCCCCCHHHHHHHCC----CCCHHHCCCCCCCCC-CCCCCCCEEEEEEECCCCC-EEEEEECC-
T ss_conf 6879999999--9876612343556666302----345223178777726-2024778789997069985-37999938-
Q ss_pred HHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCC---CCCCHHHHHHHHHHHCCCCCC
Q ss_conf 77511345675021588779995546689999805999958977---775725799999723088631
Q 000396 281 ALMRCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPKL---KSLDVKPLGCKLKDIYFPYIQ 345 (1576)
Q Consensus 281 ~L~~~s~~~~ew~l~~~ir~ps~eEi~~s~sGTFT~VVI~el~~---~~~~i~~Lkr~La~IYh~yL~ 345 (1576)
...|.+.... .+ ..++|| +|++. ++. .+....+++ .+..-|..||.
T Consensus 195 --------~~~~~i~~~~-----~~--~~~~GT--~I~l~-Lk~~~~e~~e~~~i~-~lv~k~s~fi~ 243 (264)
T 1yc1_A 195 --------GGSFTVRTDT-----GE--PMGRGT--KVILH-LKEDQTEYLEERRIK-EIVKKHSQFIG 243 (264)
T ss_dssp --------TTEEEEEECC-----SS--CCSSEE--EEEEE-ECGGGGGGGSHHHHH-HHHHHHTTTCS
T ss_pred --------CCEEEEEECC-----CC--CCCCCE--EEEEE-ECCCHHHHHHHHHHH-HHHHHHHHHCC
T ss_conf --------9658873047-----78--799792--99999-778223453599999-99999996489
No 10
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=1.00 E-value=1 Score=127.41 Aligned_cols=180 Identities=22% Similarity=0.254 Sum_probs=110.5
Q ss_pred CCCCCCCHH-HHHHCCC-CC-CHHHHHHHHHHCCHHCCCC-------------CCCCEEEEEEEEECCCEEEEEECCCCC
Q ss_conf 102588977-8850789-89-9899999993110210013-------------899607999996169859999799999
Q 000396 141 MWDLTPDTD-LLRELPE-DY-TFETALADLIDNSLQAVWT-------------NAKNERRLISVNIAEDKISVFDTGPGM 204 (1576)
Q Consensus 141 ~~dL~Ps~~-lL~~l~~-~Y-sl~sAIAELVDNSIDA~~~-------------N~~A~rI~I~I~~d~~~I~I~DNG~GM 204 (1576)
++.+..+.+ +|..+.. -| +...+|+|||.||+||..+ .....+|.|.++-+...|.|.|||.||
T Consensus 25 ~~~Fqaei~~Ll~ll~~~lYsn~~ifLRELIsNA~DA~~k~r~~~l~d~~~~~~~~~l~I~I~~d~~~~tLtI~DNGiGM 104 (281)
T 3peh_A 25 SHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISANKEKNILSITDTGIGM 104 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEEETTTTEEEEEECSCCC
T ss_pred EEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCCCCEEEEEECCCCC
T ss_conf 46543889999999988614880999999986868799999988527802116888449999982897679999489898
Q ss_pred CHHHHHHHHHCCCCCCCHHCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEHHHHH
Q ss_conf 967696753113345420000-0011468999998997653346213445303477999995079815999997326775
Q 000396 205 DSTDENSIVKWGKMGASLHRA-SKAQGIGGKPPYLTPFFGMFGYGGPIASMHLGRRALVSSKTKVSKEVYTLHLEKEALM 283 (1576)
Q Consensus 205 s~deL~~~~~wg~~g~S~kR~-~~a~~~Ggk~p~~~~~LGrFGvGlK~AsfsLG~~itV~TK~~gs~~v~~l~Ld~e~L~ 283 (1576)
+++++.+ +|++.+.|..+. ..+...++ .....+|+||+|+. ++|.+|++++|.|++.+.. .+.|..+.
T Consensus 105 t~edL~~--~LgtIa~Sgtk~f~e~l~~~~---~d~~~IGqFGVGFy-Saf~vadkV~V~Sk~~~~~-~~~Wes~g---- 173 (281)
T 3peh_A 105 TKVDLIN--NLGTIAKSGTSNFLEAISKSG---GDMSLIGQFGVGFY-SAFLVADKVIVYTKNNDDE-QYIWESTA---- 173 (281)
T ss_dssp CHHHHHH--HHHHHHHSCHHHHHHHHHHTT---CCSTTTTTTTCGGG-GGGGTEEEEEEEEECTTSC-CEEEEEET----
T ss_pred CHHHHHH--HHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCCCH-HHCCCCCEEEEEEECCCCC-EEEEEECC----
T ss_conf 9999999--999987676563777642024---55120045573201-0000168799999407887-79999889----
Q ss_pred HCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCC--CCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 1134567502158877999554668999980599995897--7775725799999723088631
Q 000396 284 RCSDAELTWRTNGGIRFPSKDEIADSPHGSFTKVEIWEPK--LKSLDVKPLGCKLKDIYFPYIQ 345 (1576)
Q Consensus 284 ~~s~~~~ew~l~~~ir~ps~eEi~~s~sGTFT~VVI~el~--~~~~~i~~Lkr~La~IYh~yL~ 345 (1576)
...|.+....+. + ..+.|| +|++.-.. ..+....+|+ .|..-|..||.
T Consensus 174 -----~g~fti~~~~~~----~--~~~~GT--~I~L~Lked~~e~le~~~ik-~ivkkys~fi~ 223 (281)
T 3peh_A 174 -----DAKFTIYKDPRG----A--TLKRGT--RISLHLKEDATNLLNDKKLM-DLISKYSQFIQ 223 (281)
T ss_dssp -----TSCEEEEECTTC----S--TTSSEE--EEEEEECGGGGGGGSHHHHH-HHHHHHTTTCC
T ss_pred -----CCCEEEEECCCC----C--CCCCCE--EEEEEECCCHHHHCCHHHHH-HHHHHHHCCCC
T ss_conf -----951898876777----7--789980--89999888626651799999-99998613478
Done!